##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM95906v1
#!genome-build-accession NCBI_Assembly:GCF_000959065.1
#!annotation-date 12/19/2025 10:22:15
#!annotation-source NCBI RefSeq GCF_000959065.1-RS_2025_12_19
##sequence-region NZ_LAEX01000001.1 1 136489
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000001.1	RefSeq	region	1	136489	.	+	.	ID=NZ_LAEX01000001.1:1..136489;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000001.1	RefSeq	gene	1	1353	.	+	.	ID=gene-TS60_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=TS60_RS00005;old_locus_tag=TS60_0001;partial=true;start_range=.,1
NZ_LAEX01000001.1	Protein Homology	CDS	1	1353	.	+	0	ID=cds-WP_039275826.1;Parent=gene-TS60_RS00005;Dbxref=GenBank:WP_039275826.1;Name=WP_039275826.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698145.1;locus_tag=TS60_RS00005;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_039275826.1;start_range=.,1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	1515	2642	.	+	.	ID=gene-TS60_RS00010;Name=TS60_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00010;old_locus_tag=TS60_0002
NZ_LAEX01000001.1	Protein Homology	CDS	1515	2642	.	+	0	ID=cds-WP_011166213.1;Parent=gene-TS60_RS00010;Dbxref=GenBank:WP_011166213.1;Name=WP_011166213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698146.1;locus_tag=TS60_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_011166213.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	2679	3212	.	+	.	ID=gene-TS60_RS00015;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=TS60_RS00015;old_locus_tag=TS60_0003
NZ_LAEX01000001.1	Protein Homology	CDS	2679	3212	.	+	0	ID=cds-WP_011166214.1;Parent=gene-TS60_RS00015;Dbxref=GenBank:WP_011166214.1;Name=WP_011166214.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166214.1;locus_tag=TS60_RS00015;product=ribonuclease M5;protein_id=WP_011166214.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	3212	4012	.	+	.	ID=gene-TS60_RS00020;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=TS60_RS00020;old_locus_tag=TS60_0004
NZ_LAEX01000001.1	Protein Homology	CDS	3212	4012	.	+	0	ID=cds-WP_011166215.1;Parent=gene-TS60_RS00020;Dbxref=GenBank:WP_011166215.1;Name=WP_011166215.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447330.1;locus_tag=TS60_RS00020;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_011166215.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	4069	5160	.	+	.	ID=gene-TS60_RS00025;Name=TS60_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00025;old_locus_tag=TS60_0005
NZ_LAEX01000001.1	Protein Homology	CDS	4069	5160	.	+	0	ID=cds-WP_011166216.1;Parent=gene-TS60_RS00025;Dbxref=GenBank:WP_011166216.1;Name=WP_011166216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166216.1;locus_tag=TS60_RS00025;product=hypothetical protein;protein_id=WP_011166216.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	5520	7424	.	+	.	ID=gene-TS60_RS00030;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=TS60_RS00030;old_locus_tag=TS60_0006
NZ_LAEX01000001.1	Protein Homology	CDS	5520	7424	.	+	0	ID=cds-WP_015545273.1;Parent=gene-TS60_RS00030;Dbxref=GenBank:WP_015545273.1;Name=WP_015545273.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862421.1;locus_tag=TS60_RS00030;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_015545273.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	7440	9944	.	+	.	ID=gene-TS60_RS00035;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=TS60_RS00035;old_locus_tag=TS60_0007
NZ_LAEX01000001.1	Protein Homology	CDS	7440	9944	.	+	0	ID=cds-WP_045596363.1;Parent=gene-TS60_RS00035;Dbxref=GenBank:WP_045596363.1;Name=WP_045596363.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862422.1;locus_tag=TS60_RS00035;product=DNA gyrase subunit A;protein_id=WP_045596363.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	9995	10972	.	-	.	ID=gene-TS60_RS00040;Name=TS60_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00040;old_locus_tag=TS60_0008
NZ_LAEX01000001.1	Protein Homology	CDS	9995	10972	.	-	0	ID=cds-WP_011166219.1;Parent=gene-TS60_RS00040;Dbxref=GenBank:WP_011166219.1;Name=WP_011166219.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729166.1;locus_tag=TS60_RS00040;product=ABC transporter permease;protein_id=WP_011166219.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	10972	13539	.	-	.	ID=gene-TS60_RS00045;Name=TS60_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00045;old_locus_tag=TS60_0009
NZ_LAEX01000001.1	Protein Homology	CDS	10972	13539	.	-	0	ID=cds-WP_015545679.1;Parent=gene-TS60_RS00045;Dbxref=GenBank:WP_015545679.1;Name=WP_015545679.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545679.1;locus_tag=TS60_RS00045;product=ABC transporter permease subunit;protein_id=WP_015545679.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	13529	15145	.	-	.	ID=gene-TS60_RS00050;Name=TS60_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00050;old_locus_tag=TS60_0010
NZ_LAEX01000001.1	Protein Homology	CDS	13529	15145	.	-	0	ID=cds-WP_039275514.1;Parent=gene-TS60_RS00050;Dbxref=GenBank:WP_039275514.1;Name=WP_039275514.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698154.1;locus_tag=TS60_RS00050;product=ABC transporter ATP-binding protein;protein_id=WP_039275514.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	15148	16800	.	-	.	ID=gene-TS60_RS00055;Name=TS60_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00055;old_locus_tag=TS60_0011
NZ_LAEX01000001.1	Protein Homology	CDS	15148	16800	.	-	0	ID=cds-WP_015545632.1;Parent=gene-TS60_RS00055;Dbxref=GenBank:WP_015545632.1;Name=WP_015545632.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545632.1;locus_tag=TS60_RS00055;product=BMP family ABC transporter substrate-binding protein;protein_id=WP_015545632.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	16991	18520	.	-	.	ID=gene-TS60_RS00060;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=TS60_RS00060;old_locus_tag=TS60_0012
NZ_LAEX01000001.1	Protein Homology	CDS	16991	18520	.	-	0	ID=cds-WP_011166223.1;Parent=gene-TS60_RS00060;Dbxref=GenBank:WP_011166223.1;Name=WP_011166223.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698156.1;locus_tag=TS60_RS00060;product=methionine--tRNA ligase;protein_id=WP_011166223.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	18724	20370	.	+	.	ID=gene-TS60_RS00065;Name=TS60_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00065;old_locus_tag=TS60_0013
NZ_LAEX01000001.1	Protein Homology	CDS	18724	20370	.	+	0	ID=cds-WP_045596367.1;Parent=gene-TS60_RS00065;Dbxref=GenBank:WP_045596367.1;Name=WP_045596367.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166224.1;locus_tag=TS60_RS00065;product=LppA family lipoprotein;protein_id=WP_045596367.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	20403	22002	.	+	.	ID=gene-TS60_RS00070;Name=TS60_RS00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00070;old_locus_tag=TS60_0014;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	20403	22002	.	+	0	ID=cds-TS60_RS00070;Parent=gene-TS60_RS00070;Note=frameshifted;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_107682115.1;locus_tag=TS60_RS00070;product=LppA family lipoprotein;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	22055	23466	.	-	.	ID=gene-TS60_RS06235;Name=TS60_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06235
NZ_LAEX01000001.1	Protein Homology	CDS	22974	23466	.	-	0	ID=cds-WP_158528755.1;Parent=gene-TS60_RS06235;Dbxref=GenBank:WP_158528755.1;Name=WP_158528755.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06235;product=IS3-like element IS1296 family transposase;protein_id=WP_158528755.1;transl_table=4
NZ_LAEX01000001.1	Protein Homology	CDS	22055	22974	.	-	2	ID=cds-WP_158528755.1;Parent=gene-TS60_RS06235;Dbxref=GenBank:WP_158528755.1;Name=WP_158528755.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06235;product=IS3-like element IS1296 family transposase;protein_id=WP_158528755.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	23542	24528	.	-	.	ID=gene-TS60_RS00085;Name=TS60_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00085;old_locus_tag=TS60_0017
NZ_LAEX01000001.1	Protein Homology	CDS	23542	24528	.	-	0	ID=cds-WP_011166228.1;Parent=gene-TS60_RS00085;Dbxref=GenBank:WP_011166228.1;Name=WP_011166228.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862433.1;locus_tag=TS60_RS00085;product=mannitol dehydrogenase family protein;protein_id=WP_011166228.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	24529	25326	.	-	.	ID=gene-TS60_RS00090;Name=TS60_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00090;old_locus_tag=TS60_0018
NZ_LAEX01000001.1	Protein Homology	CDS	24529	25326	.	-	0	ID=cds-WP_011166229.1;Parent=gene-TS60_RS00090;Dbxref=GenBank:WP_011166229.1;Name=WP_011166229.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862434.1;locus_tag=TS60_RS00090;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011166229.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	25360	25788	.	-	.	ID=gene-TS60_RS00095;Name=TS60_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00095;old_locus_tag=TS60_0019
NZ_LAEX01000001.1	Protein Homology	CDS	25360	25788	.	-	0	ID=cds-WP_011166230.1;Parent=gene-TS60_RS00095;Dbxref=GenBank:WP_011166230.1;Name=WP_011166230.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698166.1;locus_tag=TS60_RS00095;product=PTS sugar transporter subunit IIA;protein_id=WP_011166230.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	25788	26546	.	-	.	ID=gene-TS60_RS00100;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=TS60_RS00100;old_locus_tag=TS60_0020
NZ_LAEX01000001.1	Protein Homology	CDS	25788	26546	.	-	0	ID=cds-WP_045596369.1;Parent=gene-TS60_RS00100;Dbxref=GenBank:WP_045596369.1;Name=WP_045596369.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862436.1;locus_tag=TS60_RS00100;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_045596369.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	26546	28105	.	-	.	ID=gene-TS60_RS00105;Name=TS60_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00105;old_locus_tag=TS60_0021
NZ_LAEX01000001.1	Protein Homology	CDS	26546	28105	.	-	0	ID=cds-WP_015545511.1;Parent=gene-TS60_RS00105;Dbxref=GenBank:WP_015545511.1;Name=WP_015545511.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729178.1;locus_tag=TS60_RS00105;product=PTS transporter subunit EIIC;protein_id=WP_015545511.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	28359	28619	.	-	.	ID=gene-TS60_RS07100;Name=TS60_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07100;old_locus_tag=TS60_0022
NZ_LAEX01000001.1	Protein Homology	CDS	28359	28619	.	-	0	ID=cds-WP_011166233.1;Parent=gene-TS60_RS07100;Dbxref=GenBank:WP_011166233.1;Name=WP_011166233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166233.1;locus_tag=TS60_RS07100;product=putative DNA binding domain-containing protein;protein_id=WP_011166233.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	28589	29200	.	-	.	ID=gene-TS60_RS07105;Name=TS60_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07105;old_locus_tag=TS60_0023
NZ_LAEX01000001.1	Protein Homology	CDS	28589	29200	.	-	0	ID=cds-WP_011166234.1;Parent=gene-TS60_RS07105;Dbxref=GenBank:WP_011166234.1;Name=WP_011166234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166234.1;locus_tag=TS60_RS07105;product=ATP-binding protein;protein_id=WP_011166234.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	29247	29738	.	-	.	ID=gene-TS60_RS07110;Name=TS60_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07110;old_locus_tag=TS60_0024
NZ_LAEX01000001.1	Protein Homology	CDS	29247	29738	.	-	0	ID=cds-WP_011166235.1;Parent=gene-TS60_RS07110;Dbxref=GenBank:WP_011166235.1;Name=WP_011166235.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166235.1;locus_tag=TS60_RS07110;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_011166235.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	30092	30319	.	-	.	ID=gene-TS60_RS00125;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=TS60_RS00125;old_locus_tag=TS60_0025
NZ_LAEX01000001.1	Protein Homology	CDS	30092	30319	.	-	0	ID=cds-WP_045596370.1;Parent=gene-TS60_RS00125;Dbxref=GenBank:WP_045596370.1;Name=WP_045596370.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386929.1;locus_tag=TS60_RS00125;product=30S ribosomal protein S18;protein_id=WP_045596370.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	30339	30780	.	-	.	ID=gene-TS60_RS00130;Name=TS60_RS00130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00130;old_locus_tag=TS60_0026;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	30339	30780	.	-	0	ID=cds-TS60_RS00130;Parent=gene-TS60_RS00130;Note=frameshifted;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386928.1;locus_tag=TS60_RS00130;product=single-stranded DNA-binding protein;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	30792	31205	.	-	.	ID=gene-TS60_RS00135;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=TS60_RS00135;old_locus_tag=TS60_0027
NZ_LAEX01000001.1	Protein Homology	CDS	30792	31205	.	-	0	ID=cds-WP_011166238.1;Parent=gene-TS60_RS00135;Dbxref=GenBank:WP_011166238.1;Name=WP_011166238.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447353.1;locus_tag=TS60_RS00135;product=30S ribosomal protein S6;protein_id=WP_011166238.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	31411	31620	.	-	.	ID=gene-TS60_RS00140;Name=TS60_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00140;old_locus_tag=TS60_0028
NZ_LAEX01000001.1	Protein Homology	CDS	31411	31620	.	-	0	ID=cds-WP_015545525.1;Parent=gene-TS60_RS00140;Dbxref=GenBank:WP_015545525.1;Name=WP_015545525.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362747.1;locus_tag=TS60_RS00140;product=cold-shock protein;protein_id=WP_015545525.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	31806	32405	.	+	.	ID=gene-TS60_RS00145;Name=TS60_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00145;old_locus_tag=TS60_0029
NZ_LAEX01000001.1	Protein Homology	CDS	31806	32405	.	+	0	ID=cds-WP_015545499.1;Parent=gene-TS60_RS00145;Dbxref=GenBank:WP_015545499.1;Name=WP_015545499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729183.1;locus_tag=TS60_RS00145;product=FMN-dependent NADH-azoreductase;protein_id=WP_015545499.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	32442	33476	.	-	.	ID=gene-TS60_RS00150;Name=TS60_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00150;old_locus_tag=TS60_0030
NZ_LAEX01000001.1	Protein Homology	CDS	32442	33476	.	-	0	ID=cds-WP_015545463.1;Parent=gene-TS60_RS00150;Dbxref=GenBank:WP_015545463.1;Name=WP_015545463.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698171.1;locus_tag=TS60_RS00150;product=ABC transporter ATP-binding protein;protein_id=WP_015545463.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	33524	34390	.	-	.	ID=gene-TS60_RS00155;Name=TS60_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00155;old_locus_tag=TS60_0031
NZ_LAEX01000001.1	Protein Homology	CDS	33524	34390	.	-	0	ID=cds-WP_015545661.1;Parent=gene-TS60_RS00155;Dbxref=GenBank:WP_015545661.1;Name=WP_015545661.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862439.1;locus_tag=TS60_RS00155;product=Hsp33 family molecular chaperone HslO;protein_id=WP_015545661.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	34599	37751	.	-	.	ID=gene-TS60_RS00160;Name=TS60_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00160;old_locus_tag=TS60_0032
NZ_LAEX01000001.1	Protein Homology	CDS	34599	37751	.	-	0	ID=cds-WP_045596371.1;Parent=gene-TS60_RS00160;Dbxref=GenBank:WP_045596371.1;Name=WP_045596371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545413.1;locus_tag=TS60_RS00160;product=STREFT protein;protein_id=WP_045596371.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	37898	43285	.	+	.	ID=gene-TS60_RS00165;Name=TS60_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00165;old_locus_tag=TS60_0033
NZ_LAEX01000001.1	Protein Homology	CDS	37898	43285	.	+	0	ID=cds-WP_039275519.1;Parent=gene-TS60_RS00165;Dbxref=GenBank:WP_039275519.1;Name=WP_039275519.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166244.1;locus_tag=TS60_RS00165;product=ABC transporter permease;protein_id=WP_039275519.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	43723	44709	.	+	.	ID=gene-TS60_RS00170;Name=TS60_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00170;old_locus_tag=TS60_0034
NZ_LAEX01000001.1	Protein Homology	CDS	43723	44709	.	+	0	ID=cds-WP_011166245.1;Parent=gene-TS60_RS00170;Dbxref=GenBank:WP_011166245.1;Name=WP_011166245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862444.1;locus_tag=TS60_RS00170;product=2-hydroxyacid dehydrogenase;protein_id=WP_011166245.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	44728	45852	.	+	.	ID=gene-TS60_RS00175;Name=TS60_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00175;old_locus_tag=TS60_0035
NZ_LAEX01000001.1	Protein Homology	CDS	44728	45852	.	+	0	ID=cds-WP_045596372.1;Parent=gene-TS60_RS00175;Dbxref=GenBank:WP_045596372.1;Name=WP_045596372.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862445.1;locus_tag=TS60_RS00175;product=AEC family transporter;protein_id=WP_045596372.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	46204	47491	.	+	.	ID=gene-TS60_RS00180;Name=TS60_RS00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00180;old_locus_tag=TS60_0036;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	46204	47491	.	+	0	ID=cds-TS60_RS00180;Parent=gene-TS60_RS00180;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698179.1;locus_tag=TS60_RS00180;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	47695	49368	.	+	.	ID=gene-TS60_RS00190;Name=TS60_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00190;old_locus_tag=TS60_0038
NZ_LAEX01000001.1	Protein Homology	CDS	47695	49368	.	+	0	ID=cds-WP_011166249.1;Parent=gene-TS60_RS00190;Dbxref=GenBank:WP_011166249.1;Name=WP_011166249.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00190;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166249.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	49498	51444	.	-	.	ID=gene-TS60_RS00195;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=TS60_RS00195;old_locus_tag=TS60_0039
NZ_LAEX01000001.1	Protein Homology	CDS	49498	51444	.	-	0	ID=cds-WP_015545357.1;Parent=gene-TS60_RS00195;Dbxref=GenBank:WP_015545357.1;Name=WP_015545357.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447341.1;locus_tag=TS60_RS00195;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_015545357.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	51676	52059	.	+	.	ID=gene-TS60_RS07115;Name=TS60_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07115;old_locus_tag=TS60_0040
NZ_LAEX01000001.1	Protein Homology	CDS	51676	52059	.	+	0	ID=cds-WP_011166251.1;Parent=gene-TS60_RS07115;Dbxref=GenBank:WP_011166251.1;Name=WP_011166251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=TS60_RS07115;product=DUF3800 domain-containing protein;protein_id=WP_011166251.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	52116	52520	.	+	.	ID=gene-TS60_RS07120;Name=TS60_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07120;old_locus_tag=TS60_0041
NZ_LAEX01000001.1	Protein Homology	CDS	52116	52520	.	+	0	ID=cds-WP_394296900.1;Parent=gene-TS60_RS07120;Dbxref=GenBank:WP_394296900.1;Name=WP_394296900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=TS60_RS07120;product=hypothetical protein;protein_id=WP_394296900.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	52504	53709	.	-	.	ID=gene-TS60_RS00205;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=TS60_RS00205;old_locus_tag=TS60_0042
NZ_LAEX01000001.1	Protein Homology	CDS	52504	53709	.	-	0	ID=cds-WP_011166253.1;Parent=gene-TS60_RS00205;Dbxref=GenBank:WP_011166253.1;Name=WP_011166253.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729195.1;locus_tag=TS60_RS00205;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_011166253.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	53712	54539	.	-	.	ID=gene-TS60_RS00210;Name=TS60_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00210;old_locus_tag=TS60_0043
NZ_LAEX01000001.1	Protein Homology	CDS	53712	54539	.	-	0	ID=cds-WP_015545419.1;Parent=gene-TS60_RS00210;Dbxref=GenBank:WP_015545419.1;Name=WP_015545419.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729196.1;locus_tag=TS60_RS00210;product=MurR/RpiR family transcriptional regulator;protein_id=WP_015545419.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	54591	55313	.	-	.	ID=gene-TS60_RS00215;Name=TS60_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00215;old_locus_tag=TS60_0044
NZ_LAEX01000001.1	Protein Homology	CDS	54591	55313	.	-	0	ID=cds-WP_011166255.1;Parent=gene-TS60_RS00215;Dbxref=GenBank:WP_011166255.1;Name=WP_011166255.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862450.1;locus_tag=TS60_RS00215;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_011166255.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	55313	56053	.	-	.	ID=gene-TS60_RS00220;Name=TS60_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00220;old_locus_tag=TS60_0045
NZ_LAEX01000001.1	Protein Homology	CDS	55313	56053	.	-	0	ID=cds-WP_011166256.1;Parent=gene-TS60_RS00220;Dbxref=GenBank:WP_011166256.1;Name=WP_011166256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698185.1;locus_tag=TS60_RS00220;product=DNA polymerase III subunit delta;protein_id=WP_011166256.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	56031	56672	.	-	.	ID=gene-TS60_RS00225;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=TS60_RS00225;old_locus_tag=TS60_0046
NZ_LAEX01000001.1	Protein Homology	CDS	56031	56672	.	-	0	ID=cds-WP_011166257.1;Parent=gene-TS60_RS00225;Dbxref=GenBank:WP_011166257.1;Name=WP_011166257.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862452.1;locus_tag=TS60_RS00225;product=dTMP kinase;protein_id=WP_011166257.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	56675	57264	.	-	.	ID=gene-TS60_RS07760;Name=recR;gbkey=Gene;gene=recR;gene_biotype=pseudogene;locus_tag=TS60_RS07760;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	56675	57264	.	-	0	ID=cds-TS60_RS07760;Parent=gene-TS60_RS07760;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447334.1;locus_tag=TS60_RS07760;product=recombination mediator RecR;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	57266	59212	.	-	.	ID=gene-TS60_RS00235;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=TS60_RS00235;old_locus_tag=TS60_0048
NZ_LAEX01000001.1	Protein Homology	CDS	57266	59212	.	-	0	ID=cds-WP_045596376.1;Parent=gene-TS60_RS00235;Dbxref=GenBank:WP_045596376.1;Name=WP_045596376.1;Ontology_term=GO:0006260,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545330.1;locus_tag=TS60_RS00235;product=DNA polymerase III subunit gamma/tau;protein_id=WP_045596376.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	59294	59737	.	-	.	ID=gene-TS60_RS00240;Name=TS60_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00240;old_locus_tag=TS60_0049
NZ_LAEX01000001.1	Protein Homology	CDS	59294	59737	.	-	0	ID=cds-WP_015545301.1;Parent=gene-TS60_RS00240;Dbxref=GenBank:WP_015545301.1;Name=WP_015545301.1;Ontology_term=GO:0009116,GO:0001882,GO:0008270,GO:0019239;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447332.1;locus_tag=TS60_RS00240;product=nucleoside deaminase;protein_id=WP_015545301.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	59743	59838	.	-	.	ID=gene-TS60_RS05600;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=TS60_RS05600
NZ_LAEX01000001.1	cmsearch	SRP_RNA	59743	59838	.	-	.	ID=rna-TS60_RS05600;Parent=gene-TS60_RS05600;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS05600;product=signal recognition particle sRNA small type
NZ_LAEX01000001.1	cmsearch	exon	59743	59838	.	-	.	ID=exon-TS60_RS05600-1;Parent=rna-TS60_RS05600;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS05600;product=signal recognition particle sRNA small type
NZ_LAEX01000001.1	RefSeq	gene	59878	60840	.	-	.	ID=gene-TS60_RS00245;Name=TS60_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00245;old_locus_tag=TS60_0050
NZ_LAEX01000001.1	Protein Homology	CDS	59878	60840	.	-	0	ID=cds-WP_015545495.1;Parent=gene-TS60_RS00245;Dbxref=GenBank:WP_015545495.1;Name=WP_015545495.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862456.1;locus_tag=TS60_RS00245;product=GMP reductase;protein_id=WP_015545495.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	61349	61717	.	-	.	ID=gene-TS60_RS00250;Name=TS60_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00250;old_locus_tag=TS60_0051
NZ_LAEX01000001.1	GeneMarkS-2+	CDS	61349	61717	.	-	0	ID=cds-WP_230592162.1;Parent=gene-TS60_RS00250;Dbxref=GenBank:WP_230592162.1;Name=WP_230592162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS00250;product=hypothetical protein;protein_id=WP_230592162.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	61852	62160	.	-	.	ID=gene-TS60_RS00255;Name=TS60_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00255;old_locus_tag=TS60_0052
NZ_LAEX01000001.1	GeneMarkS-2+	CDS	61852	62160	.	-	0	ID=cds-WP_230592163.1;Parent=gene-TS60_RS00255;Dbxref=GenBank:WP_230592163.1;Name=WP_230592163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS00255;product=hypothetical protein;protein_id=WP_230592163.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	62266	64369	.	-	.	ID=gene-TS60_RS00260;Name=TS60_RS00260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00260;old_locus_tag=TS60_0053;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	62266	64369	.	-	0	ID=cds-TS60_RS00260;Parent=gene-TS60_RS00260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363206.1;locus_tag=TS60_RS00260;product=MAG2960 family serine endopeptidase lipoprotein;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	64519	64968	.	-	.	ID=gene-TS60_RS00265;Name=TS60_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00265;old_locus_tag=TS60_0054
NZ_LAEX01000001.1	Protein Homology	CDS	64519	64968	.	-	0	ID=cds-WP_011166264.1;Parent=gene-TS60_RS00265;Dbxref=GenBank:WP_011166264.1;Name=WP_011166264.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862459.1;locus_tag=TS60_RS00265;product=peroxiredoxin;protein_id=WP_011166264.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	65039	66781	.	+	.	ID=gene-TS60_RS00270;Name=TS60_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00270;old_locus_tag=TS60_0055
NZ_LAEX01000001.1	Protein Homology	CDS	65039	66781	.	+	0	ID=cds-WP_045596379.1;Parent=gene-TS60_RS00270;Dbxref=GenBank:WP_045596379.1;Name=WP_045596379.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166265.1;locus_tag=TS60_RS00270;product=PTS transporter subunit EIIC;protein_id=WP_045596379.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	66834	68245	.	-	.	ID=gene-TS60_RS06260;Name=TS60_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06260
NZ_LAEX01000001.1	Protein Homology	CDS	67753	68245	.	-	0	ID=cds-WP_145837449.1;Parent=gene-TS60_RS06260;Dbxref=GenBank:WP_145837449.1;Name=WP_145837449.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06260;product=IS3-like element IS1296 family transposase;protein_id=WP_145837449.1;transl_table=4
NZ_LAEX01000001.1	Protein Homology	CDS	66834	67753	.	-	2	ID=cds-WP_145837449.1;Parent=gene-TS60_RS06260;Dbxref=GenBank:WP_145837449.1;Name=WP_145837449.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06260;product=IS3-like element IS1296 family transposase;protein_id=WP_145837449.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	68314	68496	.	-	.	ID=gene-TS60_RS00285;Name=TS60_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00285;old_locus_tag=TS60_0058
NZ_LAEX01000001.1	Protein Homology	CDS	68314	68496	.	-	0	ID=cds-WP_039275530.1;Parent=gene-TS60_RS00285;Dbxref=GenBank:WP_039275530.1;Name=WP_039275530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166268.1;locus_tag=TS60_RS00285;product=hypothetical protein;protein_id=WP_039275530.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	68680	68916	.	-	.	ID=gene-TS60_RS00290;Name=TS60_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00290;old_locus_tag=TS60_0059
NZ_LAEX01000001.1	GeneMarkS-2+	CDS	68680	68916	.	-	0	ID=cds-WP_162465381.1;Parent=gene-TS60_RS00290;Dbxref=GenBank:WP_162465381.1;Name=WP_162465381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS00290;product=hypothetical protein;protein_id=WP_162465381.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	69508	71181	.	+	.	ID=gene-TS60_RS00295;Name=TS60_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00295;old_locus_tag=TS60_0060
NZ_LAEX01000001.1	Protein Homology	CDS	69508	71181	.	+	0	ID=cds-WP_045596381.1;Parent=gene-TS60_RS00295;Dbxref=GenBank:WP_045596381.1;Name=WP_045596381.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00295;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596381.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	71376	72050	.	-	.	ID=gene-TS60_RS00300;Name=TS60_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00300;old_locus_tag=TS60_0061
NZ_LAEX01000001.1	Protein Homology	CDS	71376	72050	.	-	0	ID=cds-WP_011166272.1;Parent=gene-TS60_RS00300;Dbxref=GenBank:WP_011166272.1;Name=WP_011166272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166272.1;locus_tag=TS60_RS00300;product=hypothetical protein;protein_id=WP_011166272.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	72233	72523	.	+	.	ID=gene-TS60_RS00305;Name=TS60_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00305;old_locus_tag=TS60_0062
NZ_LAEX01000001.1	Protein Homology	CDS	72233	72523	.	+	0	ID=cds-WP_015545644.1;Parent=gene-TS60_RS00305;Dbxref=GenBank:WP_015545644.1;Name=WP_015545644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387668.1;locus_tag=TS60_RS00305;product=hypothetical protein;protein_id=WP_015545644.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	72542	73123	.	+	.	ID=gene-TS60_RS00310;Name=TS60_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00310;old_locus_tag=TS60_0063
NZ_LAEX01000001.1	Protein Homology	CDS	72542	73123	.	+	0	ID=cds-WP_011166274.1;Parent=gene-TS60_RS00310;Dbxref=GenBank:WP_011166274.1;Name=WP_011166274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862463.1;locus_tag=TS60_RS00310;product=ECF transporter S component family protein;protein_id=WP_011166274.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	73238	74351	.	+	.	ID=gene-TS60_RS00315;Name=ald;gbkey=Gene;gene=ald;gene_biotype=pseudogene;locus_tag=TS60_RS00315;old_locus_tag=TS60_0064;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	73238	74351	.	+	0	ID=cds-TS60_RS00315;Parent=gene-TS60_RS00315;Note=frameshifted;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448114.1;locus_tag=TS60_RS00315;product=alanine dehydrogenase;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	74752	75576	.	+	.	ID=gene-TS60_RS00320;Name=TS60_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00320;old_locus_tag=TS60_0066
NZ_LAEX01000001.1	Protein Homology	CDS	74752	75576	.	+	0	ID=cds-WP_015545490.1;Parent=gene-TS60_RS00320;Dbxref=GenBank:WP_015545490.1;Name=WP_015545490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862465.1;locus_tag=TS60_RS00320;product=SPE_1075/MLC_0560 family membrane protein;protein_id=WP_015545490.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	75658	76926	.	+	.	ID=gene-TS60_RS00325;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=TS60_RS00325;old_locus_tag=TS60_0067
NZ_LAEX01000001.1	Protein Homology	CDS	75658	76926	.	+	0	ID=cds-WP_011166277.1;Parent=gene-TS60_RS00325;Dbxref=GenBank:WP_011166277.1;Name=WP_011166277.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166277.1;locus_tag=TS60_RS00325;product=serine--tRNA ligase;protein_id=WP_011166277.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	77028	77342	.	+	.	ID=gene-TS60_RS00330;Name=TS60_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00330;old_locus_tag=TS60_0068
NZ_LAEX01000001.1	Protein Homology	CDS	77028	77342	.	+	0	ID=cds-WP_011166278.1;Parent=gene-TS60_RS00330;Dbxref=GenBank:WP_011166278.1;Name=WP_011166278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166278.1;locus_tag=TS60_RS00330;product=DUF1904 family protein;protein_id=WP_011166278.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	77344	78318	.	+	.	ID=gene-TS60_RS00335;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=TS60_RS00335;old_locus_tag=TS60_0069
NZ_LAEX01000001.1	Protein Homology	CDS	77344	78318	.	+	0	ID=cds-WP_011166279.1;Parent=gene-TS60_RS00335;Dbxref=GenBank:WP_011166279.1;Name=WP_011166279.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862468.1;locus_tag=TS60_RS00335;product=tRNA dihydrouridine synthase DusB;protein_id=WP_011166279.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	78321	79823	.	+	.	ID=gene-TS60_RS00340;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=TS60_RS00340;old_locus_tag=TS60_0070
NZ_LAEX01000001.1	Protein Homology	CDS	78321	79823	.	+	0	ID=cds-WP_011166280.1;Parent=gene-TS60_RS00340;Dbxref=GenBank:WP_011166280.1;Name=WP_011166280.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862469.1;locus_tag=TS60_RS00340;product=lysine--tRNA ligase;protein_id=WP_011166280.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	79940	81617	.	-	.	ID=gene-TS60_RS00345;Name=TS60_RS00345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00345;old_locus_tag=TS60_0072;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	79940	81617	.	-	0	ID=cds-TS60_RS00345;Parent=gene-TS60_RS00345;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00345;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	81815	82123	.	-	.	ID=gene-TS60_RS00350;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=TS60_RS00350;old_locus_tag=TS60_0073
NZ_LAEX01000001.1	Protein Homology	CDS	81815	82123	.	-	0	ID=cds-WP_011166282.1;Parent=gene-TS60_RS00350;Dbxref=GenBank:WP_011166282.1;Name=WP_011166282.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862470.1;locus_tag=TS60_RS00350;product=thioredoxin;protein_id=WP_011166282.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	82134	82976	.	-	.	ID=gene-TS60_RS00355;Name=TS60_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00355;old_locus_tag=TS60_0074
NZ_LAEX01000001.1	Protein Homology	CDS	82134	82976	.	-	0	ID=cds-WP_011166283.1;Parent=gene-TS60_RS00355;Dbxref=GenBank:WP_011166283.1;Name=WP_011166283.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698203.1;locus_tag=TS60_RS00355;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011166283.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	83097	83205	.	-	.	ID=gene-TS60_RS00360;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=TS60_RS00360;old_locus_tag=TS60_0075
NZ_LAEX01000001.1	cmsearch	rRNA	83097	83205	.	-	.	ID=rna-TS60_RS00360;Parent=gene-TS60_RS00360;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS00360;product=5S ribosomal RNA
NZ_LAEX01000001.1	cmsearch	exon	83097	83205	.	-	.	ID=exon-TS60_RS00360-1;Parent=rna-TS60_RS00360;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS00360;product=5S ribosomal RNA
NZ_LAEX01000001.1	RefSeq	gene	83270	86181	.	-	.	ID=gene-TS60_RS00365;Name=TS60_RS00365;gbkey=Gene;gene_biotype=rRNA;locus_tag=TS60_RS00365;old_locus_tag=TS60_0076
NZ_LAEX01000001.1	cmsearch	rRNA	83270	86181	.	-	.	ID=rna-TS60_RS00365;Parent=gene-TS60_RS00365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS00365;product=23S ribosomal RNA
NZ_LAEX01000001.1	cmsearch	exon	83270	86181	.	-	.	ID=exon-TS60_RS00365-1;Parent=rna-TS60_RS00365;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS00365;product=23S ribosomal RNA
NZ_LAEX01000001.1	RefSeq	gene	86410	87933	.	-	.	ID=gene-TS60_RS00370;Name=TS60_RS00370;gbkey=Gene;gene_biotype=rRNA;locus_tag=TS60_RS00370;old_locus_tag=TS60_0077
NZ_LAEX01000001.1	cmsearch	rRNA	86410	87933	.	-	.	ID=rna-TS60_RS00370;Parent=gene-TS60_RS00370;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS00370;product=16S ribosomal RNA
NZ_LAEX01000001.1	cmsearch	exon	86410	87933	.	-	.	ID=exon-TS60_RS00370-1;Parent=rna-TS60_RS00370;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS00370;product=16S ribosomal RNA
NZ_LAEX01000001.1	RefSeq	gene	88264	88938	.	+	.	ID=gene-TS60_RS07990;Name=TS60_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07990;old_locus_tag=TS60_0078
NZ_LAEX01000001.1	GeneMarkS-2+	CDS	88264	88938	.	+	0	ID=cds-WP_457602199.1;Parent=gene-TS60_RS07990;Dbxref=GenBank:WP_457602199.1;Name=WP_457602199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07990;product=hypothetical protein;protein_id=WP_457602199.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	88844	89938	.	+	.	ID=gene-TS60_RS00375;Name=TS60_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00375;old_locus_tag=TS60_0079
NZ_LAEX01000001.1	Protein Homology	CDS	88844	89938	.	+	0	ID=cds-WP_457602200.1;Parent=gene-TS60_RS00375;Dbxref=GenBank:WP_457602200.1;Name=WP_457602200.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033559.2;locus_tag=TS60_RS00375;product=IS1634 family transposase;protein_id=WP_457602200.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	90230	90313	.	-	.	ID=gene-TS60_RS00380;Name=TS60_RS00380;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS00380;old_locus_tag=TS60_0080
NZ_LAEX01000001.1	tRNAscan-SE	tRNA	90230	90313	.	-	.	ID=rna-TS60_RS00380;Parent=gene-TS60_RS00380;anticodon=(pos:complement(90277..90279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS00380;product=tRNA-Leu
NZ_LAEX01000001.1	tRNAscan-SE	exon	90230	90313	.	-	.	ID=exon-TS60_RS00380-1;Parent=rna-TS60_RS00380;anticodon=(pos:complement(90277..90279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS00380;product=tRNA-Leu
NZ_LAEX01000001.1	RefSeq	gene	90316	90391	.	-	.	ID=gene-TS60_RS00385;Name=TS60_RS00385;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS00385;old_locus_tag=TS60_0081
NZ_LAEX01000001.1	tRNAscan-SE	tRNA	90316	90391	.	-	.	ID=rna-TS60_RS00385;Parent=gene-TS60_RS00385;anticodon=(pos:complement(90356..90358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS00385;product=tRNA-Lys
NZ_LAEX01000001.1	tRNAscan-SE	exon	90316	90391	.	-	.	ID=exon-TS60_RS00385-1;Parent=rna-TS60_RS00385;anticodon=(pos:complement(90356..90358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS00385;product=tRNA-Lys
NZ_LAEX01000001.1	RefSeq	gene	90581	92647	.	+	.	ID=gene-TS60_RS06915;Name=TS60_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06915;old_locus_tag=TS60_0082
NZ_LAEX01000001.1	Protein Homology	CDS	90581	92647	.	+	0	ID=cds-WP_015545375.1;Parent=gene-TS60_RS06915;Dbxref=GenBank:WP_015545375.1;Name=WP_015545375.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729220.1;locus_tag=TS60_RS06915;product=ComEC/Rec2 family competence protein;protein_id=WP_015545375.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	92680	95412	.	-	.	ID=gene-TS60_RS00395;Name=TS60_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00395;old_locus_tag=TS60_0083
NZ_LAEX01000001.1	Protein Homology	CDS	92680	95412	.	-	0	ID=cds-WP_015545312.1;Parent=gene-TS60_RS00395;Dbxref=GenBank:WP_015545312.1;Name=WP_015545312.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387658.1;locus_tag=TS60_RS00395;product=PhnE/PtxC family ABC transporter permease;protein_id=WP_015545312.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	95416	96168	.	-	.	ID=gene-TS60_RS00400;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=TS60_RS00400;old_locus_tag=TS60_0084
NZ_LAEX01000001.1	Protein Homology	CDS	95416	96168	.	-	0	ID=cds-WP_011166288.1;Parent=gene-TS60_RS00400;Dbxref=GenBank:WP_011166288.1;Name=WP_011166288.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166288.1;locus_tag=TS60_RS00400;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_011166288.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	96182	97525	.	-	.	ID=gene-TS60_RS00405;Name=TS60_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00405;old_locus_tag=TS60_0085
NZ_LAEX01000001.1	Protein Homology	CDS	96182	97525	.	-	0	ID=cds-WP_015545270.1;Parent=gene-TS60_RS00405;Dbxref=GenBank:WP_015545270.1;Name=WP_015545270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166289.1;locus_tag=TS60_RS00405;product=substrate-binding domain-containing protein;protein_id=WP_015545270.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	97816	99180	.	-	.	ID=gene-TS60_RS00410;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=TS60_RS00410;old_locus_tag=TS60_0086
NZ_LAEX01000001.1	Protein Homology	CDS	97816	99180	.	-	0	ID=cds-WP_015545614.1;Parent=gene-TS60_RS00410;Dbxref=GenBank:WP_015545614.1;Name=WP_015545614.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362895.1;locus_tag=TS60_RS00410;product=asparagine--tRNA ligase;protein_id=WP_015545614.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	99189	100028	.	-	.	ID=gene-TS60_RS00415;Name=TS60_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00415;old_locus_tag=TS60_0087
NZ_LAEX01000001.1	Protein Homology	CDS	99189	100028	.	-	0	ID=cds-WP_011166291.1;Parent=gene-TS60_RS00415;Dbxref=GenBank:WP_011166291.1;Name=WP_011166291.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862476.1;locus_tag=TS60_RS00415;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011166291.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	100039	101169	.	-	.	ID=gene-TS60_RS00420;Name=TS60_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00420;old_locus_tag=TS60_0088
NZ_LAEX01000001.1	Protein Homology	CDS	100039	101169	.	-	0	ID=cds-WP_011166292.1;Parent=gene-TS60_RS00420;Dbxref=GenBank:WP_011166292.1;Name=WP_011166292.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862477.1;locus_tag=TS60_RS00420;product=alpha/beta hydrolase;protein_id=WP_011166292.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	101192	102151	.	-	.	ID=gene-TS60_RS00425;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=TS60_RS00425;old_locus_tag=TS60_0089
NZ_LAEX01000001.1	Protein Homology	CDS	101192	102151	.	-	0	ID=cds-WP_015545253.1;Parent=gene-TS60_RS00425;Dbxref=GenBank:WP_015545253.1;Name=WP_015545253.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448099.1;locus_tag=TS60_RS00425;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_015545253.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	102245	102469	.	-	.	ID=gene-TS60_RS00430;Name=TS60_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00430;old_locus_tag=TS60_0090
NZ_LAEX01000001.1	Protein Homology	CDS	102245	102469	.	-	0	ID=cds-WP_011166294.1;Parent=gene-TS60_RS00430;Dbxref=GenBank:WP_011166294.1;Name=WP_011166294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387651.1;locus_tag=TS60_RS00430;product=DUF2188 domain-containing protein;protein_id=WP_011166294.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	102669	104027	.	+	.	ID=gene-TS60_RS00435;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=TS60_RS00435;old_locus_tag=TS60_0091
NZ_LAEX01000001.1	Protein Homology	CDS	102669	104027	.	+	0	ID=cds-WP_011166295.1;Parent=gene-TS60_RS00435;Dbxref=GenBank:WP_011166295.1;Name=WP_011166295.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166295.1;locus_tag=TS60_RS00435;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_011166295.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	104075	104320	.	-	.	ID=gene-TS60_RS00440;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=TS60_RS00440;old_locus_tag=TS60_0092
NZ_LAEX01000001.1	Protein Homology	CDS	104075	104320	.	-	0	ID=cds-WP_008362910.1;Parent=gene-TS60_RS00440;Dbxref=GenBank:WP_008362910.1;Name=WP_008362910.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387649.1;locus_tag=TS60_RS00440;product=30S ribosomal protein S20;protein_id=WP_008362910.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	104647	105378	.	-	.	ID=gene-TS60_RS00445;Name=TS60_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00445;old_locus_tag=TS60_0093
NZ_LAEX01000001.1	Protein Homology	CDS	104647	105378	.	-	0	ID=cds-WP_045596386.1;Parent=gene-TS60_RS00445;Dbxref=GenBank:WP_045596386.1;Name=WP_045596386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166297.1;locus_tag=TS60_RS00445;product=hypothetical protein;protein_id=WP_045596386.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	105362	106078	.	-	.	ID=gene-TS60_RS00450;Name=TS60_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00450;old_locus_tag=TS60_0094
NZ_LAEX01000001.1	Protein Homology	CDS	105362	106078	.	-	0	ID=cds-WP_015545282.1;Parent=gene-TS60_RS00450;Dbxref=GenBank:WP_015545282.1;Name=WP_015545282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862491.1;locus_tag=TS60_RS00450;product=hypothetical protein;protein_id=WP_015545282.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	106193	109027	.	-	.	ID=gene-TS60_RS00455;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=TS60_RS00455;old_locus_tag=TS60_0095
NZ_LAEX01000001.1	Protein Homology	CDS	106193	109027	.	-	0	ID=cds-WP_011166299.1;Parent=gene-TS60_RS00455;Dbxref=GenBank:WP_011166299.1;Name=WP_011166299.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166299.1;locus_tag=TS60_RS00455;product=preprotein translocase subunit SecA;protein_id=WP_011166299.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	109118	109693	.	+	.	ID=gene-TS60_RS00460;Name=TS60_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00460;old_locus_tag=TS60_0096
NZ_LAEX01000001.1	Protein Homology	CDS	109118	109693	.	+	0	ID=cds-WP_011166300.1;Parent=gene-TS60_RS00460;Dbxref=GenBank:WP_011166300.1;Name=WP_011166300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698225.1;locus_tag=TS60_RS00460;product=IMPACT family protein;protein_id=WP_011166300.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	109769	110683	.	+	.	ID=gene-TS60_RS00465;Name=TS60_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00465;old_locus_tag=TS60_0097
NZ_LAEX01000001.1	Protein Homology	CDS	109769	110683	.	+	0	ID=cds-WP_011166301.1;Parent=gene-TS60_RS00465;Dbxref=GenBank:WP_011166301.1;Name=WP_011166301.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698226.1;locus_tag=TS60_RS00465;product=5'-3' exonuclease;protein_id=WP_011166301.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	110843	111397	.	+	.	ID=gene-TS60_RS00470;Name=TS60_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00470;old_locus_tag=TS60_0098
NZ_LAEX01000001.1	Protein Homology	CDS	110843	111397	.	+	0	ID=cds-WP_011166302.1;Parent=gene-TS60_RS00470;Dbxref=GenBank:WP_011166302.1;Name=WP_011166302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166302.1;locus_tag=TS60_RS00470;product=DUF4357 domain-containing protein;protein_id=WP_011166302.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	111934	113228	.	+	.	ID=gene-TS60_RS06920;Name=TS60_RS06920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06920;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	111934	113228	.	+	0	ID=cds-TS60_RS06920;Parent=gene-TS60_RS06920;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269195.1;locus_tag=TS60_RS06920;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	113794	114069	.	+	.	ID=gene-TS60_RS00480;Name=TS60_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00480;old_locus_tag=TS60_0101
NZ_LAEX01000001.1	Protein Homology	CDS	113794	114069	.	+	0	ID=cds-WP_011166305.1;Parent=gene-TS60_RS00480;Dbxref=GenBank:WP_011166305.1;Name=WP_011166305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729250.1;locus_tag=TS60_RS00480;product=hypothetical protein;protein_id=WP_011166305.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	114071	114628	.	+	.	ID=gene-TS60_RS00485;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=TS60_RS00485;old_locus_tag=TS60_0102
NZ_LAEX01000001.1	Protein Homology	CDS	114071	114628	.	+	0	ID=cds-WP_015545517.1;Parent=gene-TS60_RS00485;Dbxref=GenBank:WP_015545517.1;Name=WP_015545517.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545517.1;locus_tag=TS60_RS00485;product=dephospho-CoA kinase;protein_id=WP_015545517.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	114787	116460	.	+	.	ID=gene-TS60_RS00490;Name=TS60_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00490;old_locus_tag=TS60_0103
NZ_LAEX01000001.1	Protein Homology	CDS	114787	116460	.	+	0	ID=cds-WP_011166307.1;Parent=gene-TS60_RS00490;Dbxref=GenBank:WP_011166307.1;Name=WP_011166307.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00490;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166307.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	116548	116664	.	+	.	ID=gene-TS60_RS07135;Name=TS60_RS07135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07135;partial=true;pseudo=true;start_range=.,116548
NZ_LAEX01000001.1	Protein Homology	CDS	116548	116664	.	+	0	ID=cds-TS60_RS07135;Parent=gene-TS60_RS07135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545517.1;locus_tag=TS60_RS07135;partial=true;product=dephospho-CoA kinase;pseudo=true;start_range=.,116548;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	116666	117067	.	-	.	ID=gene-TS60_RS00495;Name=TS60_RS00495;end_range=117067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00495;old_locus_tag=TS60_0104;partial=true;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	116666	117067	.	-	0	ID=cds-TS60_RS00495;Parent=gene-TS60_RS00495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168;end_range=117067,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF013856.6;locus_tag=TS60_RS00495;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	117173	118846	.	-	.	ID=gene-TS60_RS00500;Name=TS60_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00500;old_locus_tag=TS60_0105
NZ_LAEX01000001.1	Protein Homology	CDS	117173	118846	.	-	0	ID=cds-WP_011166307.1-2;Parent=gene-TS60_RS00500;Dbxref=GenBank:WP_011166307.1;Name=WP_011166307.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00500;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166307.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	118939	119388	.	-	.	ID=gene-TS60_RS00505;Name=TS60_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00505;old_locus_tag=TS60_0106
NZ_LAEX01000001.1	Protein Homology	CDS	118939	119388	.	-	0	ID=cds-WP_011166308.1;Parent=gene-TS60_RS00505;Dbxref=GenBank:WP_011166308.1;Name=WP_011166308.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF013856.6;locus_tag=TS60_RS00505;product=SAM-dependent methyltransferase;protein_id=WP_011166308.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	119388	119603	.	-	.	ID=gene-TS60_RS00510;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=TS60_RS00510;old_locus_tag=TS60_0107
NZ_LAEX01000001.1	Protein Homology	CDS	119388	119603	.	-	0	ID=cds-WP_011166309.1;Parent=gene-TS60_RS00510;Dbxref=GenBank:WP_011166309.1;Name=WP_011166309.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166309.1;locus_tag=TS60_RS00510;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011166309.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	119593	121002	.	-	.	ID=gene-TS60_RS00515;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=TS60_RS00515;old_locus_tag=TS60_0108
NZ_LAEX01000001.1	Protein Homology	CDS	119593	121002	.	-	0	ID=cds-WP_011166310.1;Parent=gene-TS60_RS00515;Dbxref=GenBank:WP_011166310.1;Name=WP_011166310.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166310.1;locus_tag=TS60_RS00515;product=exodeoxyribonuclease VII large subunit;protein_id=WP_011166310.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	121004	121402	.	-	.	ID=gene-TS60_RS00520;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=TS60_RS00520;old_locus_tag=TS60_0109
NZ_LAEX01000001.1	Protein Homology	CDS	121004	121402	.	-	0	ID=cds-WP_011166311.1;Parent=gene-TS60_RS00520;Dbxref=GenBank:WP_011166311.1;Name=WP_011166311.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698065.1;locus_tag=TS60_RS00520;product=transcription antitermination factor NusB;protein_id=WP_011166311.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	121414	122523	.	-	.	ID=gene-TS60_RS00525;Name=TS60_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00525;old_locus_tag=TS60_0110
NZ_LAEX01000001.1	Protein Homology	CDS	121414	122523	.	-	0	ID=cds-WP_039275548.1;Parent=gene-TS60_RS00525;Dbxref=GenBank:WP_039275548.1;Name=WP_039275548.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545631.1;locus_tag=TS60_RS00525;product=lipoprotein;protein_id=WP_039275548.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	122549	123418	.	-	.	ID=gene-TS60_RS00530;Name=TS60_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00530;old_locus_tag=TS60_0111
NZ_LAEX01000001.1	Protein Homology	CDS	122549	123418	.	-	0	ID=cds-WP_011166314.1;Parent=gene-TS60_RS00530;Dbxref=GenBank:WP_011166314.1;Name=WP_011166314.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362937.1;locus_tag=TS60_RS00530;product=deoxyribonuclease IV;protein_id=WP_011166314.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	123411	124163	.	-	.	ID=gene-TS60_RS00535;Name=TS60_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00535;old_locus_tag=TS60_0112
NZ_LAEX01000001.1	Protein Homology	CDS	123411	124163	.	-	0	ID=cds-WP_011166315.1;Parent=gene-TS60_RS00535;Dbxref=GenBank:WP_011166315.1;Name=WP_011166315.1;Ontology_term=GO:0009231,GO:0005524,GO:0008531,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,riboflavin kinase activity|0008531||IEA,metal ion binding|0046872||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166315.1;locus_tag=TS60_RS00535;product=riboflavin kinase;protein_id=WP_011166315.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	124238	124313	.	-	.	ID=gene-TS60_RS00540;Name=TS60_RS00540;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS00540;old_locus_tag=TS60_0113
NZ_LAEX01000001.1	tRNAscan-SE	tRNA	124238	124313	.	-	.	ID=rna-TS60_RS00540;Parent=gene-TS60_RS00540;anticodon=(pos:complement(124278..124280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS00540;product=tRNA-Lys
NZ_LAEX01000001.1	tRNAscan-SE	exon	124238	124313	.	-	.	ID=exon-TS60_RS00540-1;Parent=rna-TS60_RS00540;anticodon=(pos:complement(124278..124280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS00540;product=tRNA-Lys
NZ_LAEX01000001.1	RefSeq	gene	124377	126512	.	-	.	ID=gene-TS60_RS00545;Name=TS60_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00545;old_locus_tag=TS60_0114
NZ_LAEX01000001.1	Protein Homology	CDS	124377	126512	.	-	0	ID=cds-WP_011166316.1;Parent=gene-TS60_RS00545;Dbxref=GenBank:WP_011166316.1;Name=WP_011166316.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862507.1;locus_tag=TS60_RS00545;product=S41 family peptidase;protein_id=WP_011166316.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	126762	128111	.	+	.	ID=gene-TS60_RS00550;Name=TS60_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00550;old_locus_tag=TS60_0115
NZ_LAEX01000001.1	Protein Homology	CDS	126762	128111	.	+	0	ID=cds-WP_015545435.1;Parent=gene-TS60_RS00550;Dbxref=GenBank:WP_015545435.1;Name=WP_015545435.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545435.1;locus_tag=TS60_RS00550;product=glycosyltransferase family 2 protein;protein_id=WP_015545435.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	128271	129943	.	-	.	ID=gene-TS60_RS00555;Name=TS60_RS00555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00555;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	128271	129943	.	-	0	ID=cds-TS60_RS00555;Parent=gene-TS60_RS00555;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00555;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	129984	130964	.	-	.	ID=gene-TS60_RS00560;Name=TS60_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00560;old_locus_tag=TS60_0118
NZ_LAEX01000001.1	Protein Homology	CDS	129984	130964	.	-	0	ID=cds-WP_015545628.1;Parent=gene-TS60_RS00560;Dbxref=GenBank:WP_015545628.1;Name=WP_015545628.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862509.1;locus_tag=TS60_RS00560;product=glycosyltransferase family A protein;protein_id=WP_015545628.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	pseudogene	131367	132238	.	-	.	ID=gene-TS60_RS00565;Name=TS60_RS00565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00565;pseudo=true
NZ_LAEX01000001.1	Protein Homology	CDS	131367	132238	.	-	0	ID=cds-TS60_RS00565;Parent=gene-TS60_RS00565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167136.1;locus_tag=TS60_RS00565;product=UTP--glucose-1-phosphate uridylyltransferase;pseudo=true;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	132448	132990	.	-	.	ID=gene-TS60_RS07140;Name=TS60_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07140;old_locus_tag=TS60_0121
NZ_LAEX01000001.1	Protein Homology	CDS	132448	132990	.	-	0	ID=cds-WP_015545508.1;Parent=gene-TS60_RS07140;Dbxref=GenBank:WP_015545508.1;Name=WP_015545508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545508.1;locus_tag=TS60_RS07140;product=hypothetical protein;protein_id=WP_015545508.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	133240	134589	.	+	.	ID=gene-TS60_RS00575;Name=TS60_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00575;old_locus_tag=TS60_0122
NZ_LAEX01000001.1	Protein Homology	CDS	133240	134589	.	+	0	ID=cds-WP_015545309.1;Parent=gene-TS60_RS00575;Dbxref=GenBank:WP_015545309.1;Name=WP_015545309.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545435.1;locus_tag=TS60_RS00575;product=glycosyltransferase family 2 protein;protein_id=WP_015545309.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	134642	135556	.	-	.	ID=gene-TS60_RS00580;Name=TS60_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00580;old_locus_tag=TS60_0123
NZ_LAEX01000001.1	Protein Homology	CDS	134642	135556	.	-	0	ID=cds-WP_011166318.1;Parent=gene-TS60_RS00580;Dbxref=GenBank:WP_011166318.1;Name=WP_011166318.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167134.1;locus_tag=TS60_RS00580;product=glycosyltransferase family A protein;protein_id=WP_011166318.1;transl_table=4
NZ_LAEX01000001.1	RefSeq	gene	135959	136489	.	-	.	ID=gene-TS60_RS00585;Name=TS60_RS00585;end_range=136489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00585;old_locus_tag=TS60_0124;partial=true
NZ_LAEX01000001.1	Protein Homology	CDS	135959	136489	.	-	0	ID=cds-WP_045596399.1;Parent=gene-TS60_RS00585;Dbxref=GenBank:WP_045596399.1;Name=WP_045596399.1;Ontology_term=GO:0009058,GO:0016779;end_range=136489,.;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167136.1;locus_tag=TS60_RS00585;partial=true;product=sugar phosphate nucleotidyltransferase;protein_id=WP_045596399.1;transl_table=4
##sequence-region NZ_LAEX01000002.1 1 155051
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000002.1	RefSeq	region	1	155051	.	+	.	ID=NZ_LAEX01000002.1:1..155051;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000002.1	RefSeq	pseudogene	1	218	.	-	.	ID=gene-TS60_RS07145;Name=TS60_RS07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07145;old_locus_tag=TS60_0125;partial=true;pseudo=true;start_range=.,1
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	1	218	.	-	0	ID=cds-TS60_RS07145;Parent=gene-TS60_RS07145;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07145;partial=true;product=glycosyl transferase;pseudo=true;start_range=.,1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	190	783	.	-	.	ID=gene-TS60_RS05510;Name=TS60_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05510;old_locus_tag=TS60_0126
NZ_LAEX01000002.1	Protein Homology	CDS	190	783	.	-	0	ID=cds-WP_268870183.1;Parent=gene-TS60_RS05510;Dbxref=GenBank:WP_268870183.1;Name=WP_268870183.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=TS60_RS05510;product=glycosyltransferase family 2 protein;protein_id=WP_268870183.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	1187	2059	.	-	.	ID=gene-TS60_RS00600;Name=TS60_RS00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00600;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	1187	2059	.	-	0	ID=cds-TS60_RS00600;Parent=gene-TS60_RS00600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167136.1;locus_tag=TS60_RS00600;product=UTP--glucose-1-phosphate uridylyltransferase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	2269	2811	.	-	.	ID=gene-TS60_RS07150;Name=TS60_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07150;old_locus_tag=TS60_0130
NZ_LAEX01000002.1	Protein Homology	CDS	2269	2811	.	-	0	ID=cds-WP_015545508.1-2;Parent=gene-TS60_RS07150;Dbxref=GenBank:WP_015545508.1;Name=WP_015545508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545508.1;locus_tag=TS60_RS07150;product=hypothetical protein;protein_id=WP_015545508.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	3061	4410	.	+	.	ID=gene-TS60_RS00610;Name=TS60_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00610;old_locus_tag=TS60_0131
NZ_LAEX01000002.1	Protein Homology	CDS	3061	4410	.	+	0	ID=cds-WP_015545309.1-2;Parent=gene-TS60_RS00610;Dbxref=GenBank:WP_015545309.1;Name=WP_015545309.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545435.1;locus_tag=TS60_RS00610;product=glycosyltransferase family 2 protein;protein_id=WP_015545309.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	4463	5376	.	-	.	ID=gene-TS60_RS00615;Name=TS60_RS00615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00615;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	4463	5376	.	-	0	ID=cds-TS60_RS00615;Parent=gene-TS60_RS00615;Note=frameshifted;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167134.1;locus_tag=TS60_RS00615;product=glycosyltransferase family A protein;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	5779	6651	.	-	.	ID=gene-TS60_RS00620;Name=TS60_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00620;old_locus_tag=TS60_0134
NZ_LAEX01000002.1	Protein Homology	CDS	5779	6651	.	-	0	ID=cds-WP_011166319.1;Parent=gene-TS60_RS00620;Dbxref=GenBank:WP_011166319.1;Name=WP_011166319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167136.1;locus_tag=TS60_RS00620;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_011166319.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	6860	7300	.	-	.	ID=gene-TS60_RS00625;Name=TS60_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00625;old_locus_tag=TS60_0135
NZ_LAEX01000002.1	Protein Homology	CDS	6860	7300	.	-	0	ID=cds-WP_011166320.1;Parent=gene-TS60_RS00625;Dbxref=GenBank:WP_011166320.1;Name=WP_011166320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729264.1;locus_tag=TS60_RS00625;product=hypothetical protein;protein_id=WP_011166320.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	7354	8130	.	+	.	ID=gene-TS60_RS00630;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=TS60_RS00630;old_locus_tag=TS60_0136
NZ_LAEX01000002.1	Protein Homology	CDS	7354	8130	.	+	0	ID=cds-WP_011166321.1;Parent=gene-TS60_RS00630;Dbxref=GenBank:WP_011166321.1;Name=WP_011166321.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166321.1;locus_tag=TS60_RS00630;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_011166321.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	8194	9732	.	+	.	ID=gene-TS60_RS00635;Name=TS60_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00635;old_locus_tag=TS60_0137
NZ_LAEX01000002.1	Protein Homology	CDS	8194	9732	.	+	0	ID=cds-WP_011166322.1;Parent=gene-TS60_RS00635;Dbxref=GenBank:WP_011166322.1;Name=WP_011166322.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862513.1;locus_tag=TS60_RS00635;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_011166322.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	9761	10559	.	-	.	ID=gene-TS60_RS05630;Name=TS60_RS05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05630;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	9761	10559	.	-	0	ID=cds-TS60_RS05630;Parent=gene-TS60_RS05630;Note=frameshifted;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387021.1;locus_tag=TS60_RS05630;product=TatD family hydrolase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	10745	11971	.	+	.	ID=gene-TS60_RS00640;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=TS60_RS00640;old_locus_tag=TS60_0138
NZ_LAEX01000002.1	Protein Homology	CDS	10745	11971	.	+	0	ID=cds-WP_015545552.1;Parent=gene-TS60_RS00640;Dbxref=GenBank:WP_015545552.1;Name=WP_015545552.1;Ontology_term=GO:0006567,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729268.1;locus_tag=TS60_RS00640;product=threonine ammonia-lyase;protein_id=WP_015545552.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	12189	13769	.	+	.	ID=gene-TS60_RS00645;Name=TS60_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00645;old_locus_tag=TS60_0139
NZ_LAEX01000002.1	Protein Homology	CDS	12189	13769	.	+	0	ID=cds-WP_039275551.1;Parent=gene-TS60_RS00645;Dbxref=GenBank:WP_039275551.1;Name=WP_039275551.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862515.1;locus_tag=TS60_RS00645;product=MFS transporter;protein_id=WP_039275551.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	13781	14641	.	+	.	ID=gene-TS60_RS00650;Name=TS60_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00650;old_locus_tag=TS60_0140
NZ_LAEX01000002.1	Protein Homology	CDS	13781	14641	.	+	0	ID=cds-WP_011166325.1;Parent=gene-TS60_RS00650;Dbxref=GenBank:WP_011166325.1;Name=WP_011166325.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862516.1;locus_tag=TS60_RS00650;product=alpha/beta hydrolase;protein_id=WP_011166325.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	14917	15633	.	+	.	ID=gene-TS60_RS00655;Name=TS60_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00655;old_locus_tag=TS60_0141
NZ_LAEX01000002.1	Protein Homology	CDS	14917	15633	.	+	0	ID=cds-WP_011166326.1;Parent=gene-TS60_RS00655;Dbxref=GenBank:WP_011166326.1;Name=WP_011166326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166326.1;locus_tag=TS60_RS00655;product=Vmc-like lipoprotein signal peptide domain-containing protein;protein_id=WP_011166326.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	15950	17365	.	+	.	ID=gene-TS60_RS00660;Name=TS60_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00660;old_locus_tag=TS60_0142
NZ_LAEX01000002.1	Protein Homology	CDS	15950	17365	.	+	0	ID=cds-WP_011166327.1;Parent=gene-TS60_RS00660;Dbxref=GenBank:WP_011166327.1;Name=WP_011166327.1;Ontology_term=GO:0055085,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698050.1;locus_tag=TS60_RS00660;product=hexose phosphate transporter;protein_id=WP_011166327.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	17497	18823	.	+	.	ID=gene-TS60_RS07765;Name=TS60_RS07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07765;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	17497	18823	.	+	0	ID=cds-TS60_RS07765;Parent=gene-TS60_RS07765;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954660.1;locus_tag=TS60_RS07765;product=transposase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	18957	20633	.	-	.	ID=gene-TS60_RS05650;Name=TS60_RS05650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05650;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	18957	20633	.	-	0	ID=cds-TS60_RS05650;Parent=gene-TS60_RS05650;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05650;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	20725	21216	.	-	.	ID=gene-TS60_RS00690;Name=TS60_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00690;old_locus_tag=TS60_0149
NZ_LAEX01000002.1	Protein Homology	CDS	20725	21216	.	-	0	ID=cds-WP_011166329.1;Parent=gene-TS60_RS00690;Dbxref=GenBank:WP_011166329.1;Name=WP_011166329.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166329.1;locus_tag=TS60_RS00690;product=lipoprotein;protein_id=WP_011166329.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	21296	22708	.	-	.	ID=gene-TS60_RS00695;Name=TS60_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00695;old_locus_tag=TS60_0150
NZ_LAEX01000002.1	Protein Homology	CDS	21296	22708	.	-	0	ID=cds-WP_011166330.1;Parent=gene-TS60_RS00695;Dbxref=GenBank:WP_011166330.1;Name=WP_011166330.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS00695;product=IS1634-like element ISMmy1 family transposase;protein_id=WP_011166330.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	23268	23555	.	-	.	ID=gene-TS60_RS05515;Name=TS60_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05515;old_locus_tag=TS60_0151
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	23268	23555	.	-	0	ID=cds-WP_011166331.1;Parent=gene-TS60_RS05515;Dbxref=GenBank:WP_011166331.1;Name=WP_011166331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS05515;product=hypothetical protein;protein_id=WP_011166331.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	23666	23914	.	-	.	ID=gene-TS60_RS07910;Name=TS60_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07910
NZ_LAEX01000002.1	Protein Homology	CDS	23666	23914	.	-	0	ID=cds-WP_039275552.1;Parent=gene-TS60_RS07910;Dbxref=GenBank:WP_039275552.1;Name=WP_039275552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=TS60_RS07910;product=variable surface lipoprotein;protein_id=WP_039275552.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	23903	24725	.	+	.	ID=gene-TS60_RS06930;Name=TS60_RS06930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06930;old_locus_tag=TS60_0152;partial=true;pseudo=true;start_range=.,23903
NZ_LAEX01000002.1	Protein Homology	CDS	23903	24725	.	+	0	ID=cds-TS60_RS06930;Parent=gene-TS60_RS06930;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954660.1;locus_tag=TS60_RS06930;partial=true;product=transposase;pseudo=true;start_range=.,23903;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	25085	25342	.	+	.	ID=gene-TS60_RS06335;Name=TS60_RS06335;end_range=25342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06335;partial=true;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	25085	25342	.	+	0	ID=cds-TS60_RS06335;Parent=gene-TS60_RS06335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS06335;partial=true;product=IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	25391	26802	.	+	.	ID=gene-TS60_RS06340;Name=TS60_RS06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06340;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	25391	26802	.	+	0	ID=cds-TS60_RS06340;Parent=gene-TS60_RS06340;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06340;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	27075	27851	.	+	.	ID=gene-TS60_RS00745;Name=TS60_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00745;old_locus_tag=TS60_0157
NZ_LAEX01000002.1	Protein Homology	CDS	27075	27851	.	+	0	ID=cds-WP_011166333.1;Parent=gene-TS60_RS00745;Dbxref=GenBank:WP_011166333.1;Name=WP_011166333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166333.1;locus_tag=TS60_RS00745;product=glucosamine-6-phosphate deaminase;protein_id=WP_011166333.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	27855	29528	.	+	.	ID=gene-TS60_RS00750;Name=TS60_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00750;old_locus_tag=TS60_0158
NZ_LAEX01000002.1	Protein Homology	CDS	27855	29528	.	+	0	ID=cds-WP_011166334.1;Parent=gene-TS60_RS00750;Dbxref=GenBank:WP_011166334.1;Name=WP_011166334.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862519.1;locus_tag=TS60_RS00750;product=PTS transporter subunit EIIC;protein_id=WP_011166334.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	29659	31110	.	+	.	ID=gene-TS60_RS00755;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=TS60_RS00755;old_locus_tag=TS60_0159
NZ_LAEX01000002.1	Protein Homology	CDS	29659	31110	.	+	0	ID=cds-WP_011166335.1;Parent=gene-TS60_RS00755;Dbxref=GenBank:WP_011166335.1;Name=WP_011166335.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862520.1;locus_tag=TS60_RS00755;product=glutamate--tRNA ligase;protein_id=WP_011166335.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	31113	32327	.	+	.	ID=gene-TS60_RS00760;Name=TS60_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00760;old_locus_tag=TS60_0160
NZ_LAEX01000002.1	Protein Homology	CDS	31113	32327	.	+	0	ID=cds-WP_015545613.1;Parent=gene-TS60_RS00760;Dbxref=GenBank:WP_015545613.1;Name=WP_015545613.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862521.1;locus_tag=TS60_RS00760;product=HD domain-containing protein;protein_id=WP_015545613.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	32353	32781	.	+	.	ID=gene-TS60_RS00765;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=TS60_RS00765;old_locus_tag=TS60_0161
NZ_LAEX01000002.1	Protein Homology	CDS	32353	32781	.	+	0	ID=cds-WP_011166337.1;Parent=gene-TS60_RS00765;Dbxref=GenBank:WP_011166337.1;Name=WP_011166337.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729276.1;locus_tag=TS60_RS00765;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_011166337.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	32872	34470	.	+	.	ID=gene-TS60_RS00770;Name=TS60_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00770;old_locus_tag=TS60_0162
NZ_LAEX01000002.1	Protein Homology	CDS	32872	34470	.	+	0	ID=cds-WP_011166338.1;Parent=gene-TS60_RS00770;Dbxref=GenBank:WP_011166338.1;Name=WP_011166338.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862522.1;locus_tag=TS60_RS00770;product=CTP synthase;protein_id=WP_011166338.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	34704	35664	.	+	.	ID=gene-TS60_RS00775;Name=TS60_RS00775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS00775;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	34704	35664	.	+	0	ID=cds-TS60_RS00775;Parent=gene-TS60_RS00775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167052.1;locus_tag=TS60_RS00775;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	35679	36647	.	+	.	ID=gene-TS60_RS00780;Name=TS60_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00780;old_locus_tag=TS60_0164
NZ_LAEX01000002.1	Protein Homology	CDS	35679	36647	.	+	0	ID=cds-WP_011166340.1;Parent=gene-TS60_RS00780;Dbxref=GenBank:WP_011166340.1;Name=WP_011166340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166340.1;locus_tag=TS60_RS00780;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166340.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	36686	38097	.	-	.	ID=gene-TS60_RS06345;Name=TS60_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06345
NZ_LAEX01000002.1	Protein Homology	CDS	37605	38097	.	-	0	ID=cds-WP_139552549.1;Parent=gene-TS60_RS06345;Dbxref=GenBank:WP_139552549.1;Name=WP_139552549.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06345;product=IS3-like element IS1296 family transposase;protein_id=WP_139552549.1;transl_table=4
NZ_LAEX01000002.1	Protein Homology	CDS	36686	37605	.	-	2	ID=cds-WP_139552549.1;Parent=gene-TS60_RS06345;Dbxref=GenBank:WP_139552549.1;Name=WP_139552549.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06345;product=IS3-like element IS1296 family transposase;protein_id=WP_139552549.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	38299	39192	.	+	.	ID=gene-TS60_RS00795;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=TS60_RS00795;old_locus_tag=TS60_0167
NZ_LAEX01000002.1	Protein Homology	CDS	38299	39192	.	+	0	ID=cds-WP_011166343.1;Parent=gene-TS60_RS00795;Dbxref=GenBank:WP_011166343.1;Name=WP_011166343.1;Ontology_term=GO:0006096,GO:0030388,GO:0004332,GO:0008270;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=glycolytic process|0006096||IEA,fructose 1%2C6-bisphosphate metabolic process|0030388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362366.1;locus_tag=TS60_RS00795;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=WP_011166343.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	39332	41005	.	-	.	ID=gene-TS60_RS00800;Name=TS60_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00800;old_locus_tag=TS60_0168
NZ_LAEX01000002.1	Protein Homology	CDS	39332	41005	.	-	0	ID=cds-WP_045596410.1;Parent=gene-TS60_RS00800;Dbxref=GenBank:WP_045596410.1;Name=WP_045596410.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00800;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596410.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	41204	42616	.	+	.	ID=gene-TS60_RS06355;Name=TS60_RS06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06355;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	41204	42616	.	+	0	ID=cds-TS60_RS06355;Parent=gene-TS60_RS06355;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06355;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	42675	44173	.	-	.	ID=gene-TS60_RS06360;Name=TS60_RS06360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06360;old_locus_tag=TS60_0171;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	42675	44173	.	-	0	ID=cds-TS60_RS06360;Parent=gene-TS60_RS06360;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584429.1;locus_tag=TS60_RS06360;product=MFS transporter;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	44767	45471	.	+	.	ID=gene-TS60_RS00820;Name=TS60_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00820;old_locus_tag=TS60_0173
NZ_LAEX01000002.1	Protein Homology	CDS	44767	45471	.	+	0	ID=cds-WP_015545283.1;Parent=gene-TS60_RS00820;Dbxref=GenBank:WP_015545283.1;Name=WP_015545283.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545283.1;locus_tag=TS60_RS00820;product=glycerophosphodiester phosphodiesterase;protein_id=WP_015545283.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	45632	45910	.	+	.	ID=gene-TS60_RS00825;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=TS60_RS00825;old_locus_tag=TS60_0174
NZ_LAEX01000002.1	Protein Homology	CDS	45632	45910	.	+	0	ID=cds-WP_011166348.1;Parent=gene-TS60_RS00825;Dbxref=GenBank:WP_011166348.1;Name=WP_011166348.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862529.1;locus_tag=TS60_RS00825;product=50S ribosomal protein L31;protein_id=WP_011166348.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	45983	47881	.	+	.	ID=gene-TS60_RS00830;Name=TS60_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00830;old_locus_tag=TS60_0175
NZ_LAEX01000002.1	Protein Homology	CDS	45983	47881	.	+	0	ID=cds-WP_015545339.1;Parent=gene-TS60_RS00830;Dbxref=GenBank:WP_015545339.1;Name=WP_015545339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545339.1;locus_tag=TS60_RS00830;product=hypothetical protein;protein_id=WP_015545339.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	47891	48841	.	+	.	ID=gene-TS60_RS00835;Name=TS60_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00835;old_locus_tag=TS60_0176
NZ_LAEX01000002.1	Protein Homology	CDS	47891	48841	.	+	0	ID=cds-WP_015545557.1;Parent=gene-TS60_RS00835;Dbxref=GenBank:WP_015545557.1;Name=WP_015545557.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862531.1;locus_tag=TS60_RS00835;product=DHH family phosphoesterase;protein_id=WP_015545557.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	48843	49472	.	+	.	ID=gene-TS60_RS00840;Name=TS60_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00840;old_locus_tag=TS60_0177
NZ_LAEX01000002.1	Protein Homology	CDS	48843	49472	.	+	0	ID=cds-WP_015545523.1;Parent=gene-TS60_RS00840;Dbxref=GenBank:WP_015545523.1;Name=WP_015545523.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698038.1;locus_tag=TS60_RS00840;product=thymidine kinase;protein_id=WP_015545523.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	49475	50569	.	+	.	ID=gene-TS60_RS00845;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=TS60_RS00845;old_locus_tag=TS60_0178
NZ_LAEX01000002.1	Protein Homology	CDS	49475	50569	.	+	0	ID=cds-WP_011166352.1;Parent=gene-TS60_RS00845;Dbxref=GenBank:WP_011166352.1;Name=WP_011166352.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387040.1;locus_tag=TS60_RS00845;product=peptide chain release factor 1;protein_id=WP_011166352.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	50562	51410	.	+	.	ID=gene-TS60_RS00850;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=TS60_RS00850;old_locus_tag=TS60_0179
NZ_LAEX01000002.1	Protein Homology	CDS	50562	51410	.	+	0	ID=cds-WP_015545566.1;Parent=gene-TS60_RS00850;Dbxref=GenBank:WP_015545566.1;Name=WP_015545566.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729288.1;locus_tag=TS60_RS00850;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_015545566.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	51419	52891	.	+	.	ID=gene-TS60_RS00855;Name=TS60_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00855;old_locus_tag=TS60_0180
NZ_LAEX01000002.1	Protein Homology	CDS	51419	52891	.	+	0	ID=cds-WP_011166354.1;Parent=gene-TS60_RS00855;Dbxref=GenBank:WP_011166354.1;Name=WP_011166354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729289.1;locus_tag=TS60_RS00855;product=hypothetical protein;protein_id=WP_011166354.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	52900	53400	.	+	.	ID=gene-TS60_RS00860;Name=TS60_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00860;old_locus_tag=TS60_0181
NZ_LAEX01000002.1	Protein Homology	CDS	52900	53400	.	+	0	ID=cds-WP_011166355.1;Parent=gene-TS60_RS00860;Dbxref=GenBank:WP_011166355.1;Name=WP_011166355.1;Ontology_term=GO:0000166,GO:0003725,GO:0005524,GO:0061710;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362382.1;locus_tag=TS60_RS00860;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_011166355.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	53513	54427	.	+	.	ID=gene-TS60_RS00865;Name=TS60_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00865;old_locus_tag=TS60_0182
NZ_LAEX01000002.1	Protein Homology	CDS	53513	54427	.	+	0	ID=cds-WP_045596420.1;Parent=gene-TS60_RS00865;Dbxref=GenBank:WP_045596420.1;Name=WP_045596420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862536.1;locus_tag=TS60_RS00865;product=hypothetical protein;protein_id=WP_045596420.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	54656	55363	.	+	.	ID=gene-TS60_RS00870;Name=TS60_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00870;old_locus_tag=TS60_0183
NZ_LAEX01000002.1	Protein Homology	CDS	54656	55363	.	+	0	ID=cds-WP_011166357.1;Parent=gene-TS60_RS00870;Dbxref=GenBank:WP_011166357.1;Name=WP_011166357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862537.1;locus_tag=TS60_RS00870;product=hypothetical protein;protein_id=WP_011166357.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	55363	56892	.	+	.	ID=gene-TS60_RS00875;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=TS60_RS00875;old_locus_tag=TS60_0184
NZ_LAEX01000002.1	Protein Homology	CDS	55363	56892	.	+	0	ID=cds-WP_011166358.1;Parent=gene-TS60_RS00875;Dbxref=GenBank:WP_011166358.1;Name=WP_011166358.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269171.1;locus_tag=TS60_RS00875;product=cardiolipin synthase;protein_id=WP_011166358.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	57016	57435	.	+	.	ID=gene-TS60_RS00880;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=TS60_RS00880;old_locus_tag=TS60_0185
NZ_LAEX01000002.1	Protein Homology	CDS	57016	57435	.	+	0	ID=cds-WP_008362393.1;Parent=gene-TS60_RS00880;Dbxref=GenBank:WP_008362393.1;Name=WP_008362393.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362393.1;locus_tag=TS60_RS00880;product=30S ribosomal protein S12;protein_id=WP_008362393.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	57522	57989	.	+	.	ID=gene-TS60_RS00885;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=TS60_RS00885;old_locus_tag=TS60_0186
NZ_LAEX01000002.1	Protein Homology	CDS	57522	57989	.	+	0	ID=cds-WP_011166360.1;Parent=gene-TS60_RS00885;Dbxref=GenBank:WP_011166360.1;Name=WP_011166360.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035361.1;locus_tag=TS60_RS00885;product=30S ribosomal protein S7;protein_id=WP_011166360.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	58014	60083	.	+	.	ID=gene-TS60_RS00890;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=TS60_RS00890;old_locus_tag=TS60_0187
NZ_LAEX01000002.1	Protein Homology	CDS	58014	60083	.	+	0	ID=cds-WP_011166361.1;Parent=gene-TS60_RS00890;Dbxref=GenBank:WP_011166361.1;Name=WP_011166361.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447517.1;locus_tag=TS60_RS00890;product=elongation factor G;protein_id=WP_011166361.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	60215	61402	.	+	.	ID=gene-TS60_RS00895;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=TS60_RS00895;old_locus_tag=TS60_0188
NZ_LAEX01000002.1	Protein Homology	CDS	60215	61402	.	+	0	ID=cds-WP_011166362.1;Parent=gene-TS60_RS00895;Dbxref=GenBank:WP_011166362.1;Name=WP_011166362.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004428385.1;locus_tag=TS60_RS00895;product=elongation factor Tu;protein_id=WP_011166362.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	61538	63409	.	+	.	ID=gene-TS60_RS07770;Name=TS60_RS07770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07770;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	61538	63409	.	+	0	ID=cds-TS60_RS07770;Parent=gene-TS60_RS07770;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698029.1;locus_tag=TS60_RS07770;product=PTS transporter subunit EIIC;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	63393	65663	.	+	.	ID=gene-TS60_RS00905;Name=TS60_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00905;old_locus_tag=TS60_0193
NZ_LAEX01000002.1	Protein Homology	CDS	63393	65663	.	+	0	ID=cds-WP_011166364.1;Parent=gene-TS60_RS00905;Dbxref=GenBank:WP_011166364.1;Name=WP_011166364.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862540.1;locus_tag=TS60_RS00905;product=glycoside hydrolase family 31 protein;protein_id=WP_011166364.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	65816	67171	.	+	.	ID=gene-TS60_RS00910;Name=TS60_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00910;old_locus_tag=TS60_0194
NZ_LAEX01000002.1	Protein Homology	CDS	65816	67171	.	+	0	ID=cds-WP_011166365.1;Parent=gene-TS60_RS00910;Dbxref=GenBank:WP_011166365.1;Name=WP_011166365.1;Ontology_term=GO:0019538,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862541.1;locus_tag=TS60_RS00910;product=M17 family metallopeptidase;protein_id=WP_011166365.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	68945	69562	.	+	.	ID=gene-TS60_RS00920;Name=TS60_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00920;old_locus_tag=TS60_0195
NZ_LAEX01000002.1	Protein Homology	CDS	68945	69562	.	+	0	ID=cds-WP_011166367.1;Parent=gene-TS60_RS00920;Dbxref=GenBank:WP_011166367.1;Name=WP_011166367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166367.1;locus_tag=TS60_RS00920;product=hypothetical protein;protein_id=WP_011166367.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	69625	70290	.	-	.	ID=gene-TS60_RS00925;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=TS60_RS00925;old_locus_tag=TS60_0196
NZ_LAEX01000002.1	Protein Homology	CDS	69625	70290	.	-	0	ID=cds-WP_011166368.1;Parent=gene-TS60_RS00925;Dbxref=GenBank:WP_011166368.1;Name=WP_011166368.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698026.1;locus_tag=TS60_RS00925;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_011166368.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	70292	71694	.	-	.	ID=gene-TS60_RS00930;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=pseudogene;locus_tag=TS60_RS00930;old_locus_tag=TS60_0197;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	70292	71694	.	-	0	ID=cds-TS60_RS00930;Parent=gene-TS60_RS00930;Note=frameshifted;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729301.1;locus_tag=TS60_RS00930;product=magnesium transporter;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	71839	72249	.	+	.	ID=gene-TS60_RS05680;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=TS60_RS05680
NZ_LAEX01000002.1	cmsearch	tmRNA	71839	72249	.	+	.	ID=rna-TS60_RS05680;Parent=gene-TS60_RS05680;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS05680;product=transfer-messenger RNA
NZ_LAEX01000002.1	cmsearch	exon	71839	72249	.	+	.	ID=exon-TS60_RS05680-1;Parent=rna-TS60_RS05680;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS05680;product=transfer-messenger RNA
NZ_LAEX01000002.1	RefSeq	gene	72420	74093	.	+	.	ID=gene-TS60_RS00935;Name=TS60_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00935;old_locus_tag=TS60_0199
NZ_LAEX01000002.1	Protein Homology	CDS	72420	74093	.	+	0	ID=cds-WP_045596426.1;Parent=gene-TS60_RS00935;Dbxref=GenBank:WP_045596426.1;Name=WP_045596426.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00935;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596426.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	74299	76430	.	+	.	ID=gene-TS60_RS07915;Name=TS60_RS07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07915;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	74299	76430	.	+	0	ID=cds-TS60_RS07915;Parent=gene-TS60_RS07915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_265493187.1;locus_tag=TS60_RS07915;product=MAG6410 family transglutaminase-related lipoprotein;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	76499	76663	.	+	.	ID=gene-TS60_RS06875;Name=TS60_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06875;old_locus_tag=TS60_0203
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	76499	76663	.	+	0	ID=cds-WP_015545676.1;Parent=gene-TS60_RS06875;Dbxref=GenBank:WP_015545676.1;Name=WP_015545676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS06875;product=hypothetical protein;protein_id=WP_015545676.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	76704	78377	.	+	.	ID=gene-TS60_RS00955;Name=TS60_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00955;old_locus_tag=TS60_0204
NZ_LAEX01000002.1	Protein Homology	CDS	76704	78377	.	+	0	ID=cds-WP_011166374.1;Parent=gene-TS60_RS00955;Dbxref=GenBank:WP_011166374.1;Name=WP_011166374.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS00955;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166374.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	78443	79857	.	+	.	ID=gene-TS60_RS06940;Name=TS60_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06940
NZ_LAEX01000002.1	Protein Homology	CDS	78443	78938	.	+	0	ID=cds-WP_162465382.1;Parent=gene-TS60_RS06940;Dbxref=GenBank:WP_162465382.1;Name=WP_162465382.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06940;product=IS3 family transposase;protein_id=WP_162465382.1;transl_table=4
NZ_LAEX01000002.1	Protein Homology	CDS	78938	79857	.	+	2	ID=cds-WP_162465382.1;Parent=gene-TS60_RS06940;Dbxref=GenBank:WP_162465382.1;Name=WP_162465382.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06940;product=IS3 family transposase;protein_id=WP_162465382.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	79898	80650	.	-	.	ID=gene-TS60_RS00970;Name=TS60_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00970;old_locus_tag=TS60_0207
NZ_LAEX01000002.1	Protein Homology	CDS	79898	80650	.	-	0	ID=cds-WP_230592171.1;Parent=gene-TS60_RS00970;Dbxref=GenBank:WP_230592171.1;Name=WP_230592171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166377.1;locus_tag=TS60_RS00970;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_230592171.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	80737	81333	.	-	.	ID=gene-TS60_RS00975;Name=TS60_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00975;old_locus_tag=TS60_0208
NZ_LAEX01000002.1	Protein Homology	CDS	80737	81333	.	-	0	ID=cds-WP_015545367.1;Parent=gene-TS60_RS00975;Dbxref=GenBank:WP_015545367.1;Name=WP_015545367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545367.1;locus_tag=TS60_RS00975;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_015545367.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	81543	82847	.	-	.	ID=gene-TS60_RS00980;Name=TS60_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00980;old_locus_tag=TS60_0209
NZ_LAEX01000002.1	Protein Homology	CDS	81543	82847	.	-	0	ID=cds-WP_011166379.1;Parent=gene-TS60_RS00980;Dbxref=GenBank:WP_011166379.1;Name=WP_011166379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166379.1;locus_tag=TS60_RS00980;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166379.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	82953	85643	.	-	.	ID=gene-TS60_RS00985;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=TS60_RS00985;old_locus_tag=TS60_0210
NZ_LAEX01000002.1	Protein Homology	CDS	82953	85643	.	-	0	ID=cds-WP_011166380.1;Parent=gene-TS60_RS00985;Dbxref=GenBank:WP_011166380.1;Name=WP_011166380.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862547.1;locus_tag=TS60_RS00985;product=alanine--tRNA ligase;protein_id=WP_011166380.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	85715	86209	.	-	.	ID=gene-TS60_RS00990;Name=TS60_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS00990;old_locus_tag=TS60_0211
NZ_LAEX01000002.1	Protein Homology	CDS	85715	86209	.	-	0	ID=cds-WP_011166381.1;Parent=gene-TS60_RS00990;Dbxref=GenBank:WP_011166381.1;Name=WP_011166381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698022.1;locus_tag=TS60_RS00990;product=M48 family metallopeptidase;protein_id=WP_011166381.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	86426	87670	.	+	.	ID=gene-TS60_RS00995;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=TS60_RS00995;old_locus_tag=TS60_0212
NZ_LAEX01000002.1	Protein Homology	CDS	86426	87670	.	+	0	ID=cds-WP_011166382.1;Parent=gene-TS60_RS00995;Dbxref=GenBank:WP_011166382.1;Name=WP_011166382.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=oppB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862548.1;locus_tag=TS60_RS00995;product=oligopeptide ABC transporter permease OppB;protein_id=WP_011166382.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	87686	88696	.	+	.	ID=gene-TS60_RS01000;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=TS60_RS01000;old_locus_tag=TS60_0213
NZ_LAEX01000002.1	Protein Homology	CDS	87686	88696	.	+	0	ID=cds-WP_011166383.1;Parent=gene-TS60_RS01000;Dbxref=GenBank:WP_011166383.1;Name=WP_011166383.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=oppC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166383.1;locus_tag=TS60_RS01000;product=oligopeptide ABC transporter permease OppC;protein_id=WP_011166383.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	88710	90410	.	+	.	ID=gene-TS60_RS01005;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=TS60_RS01005;old_locus_tag=TS60_0214
NZ_LAEX01000002.1	Protein Homology	CDS	88710	90410	.	+	0	ID=cds-WP_011166384.1;Parent=gene-TS60_RS01005;Dbxref=GenBank:WP_011166384.1;Name=WP_011166384.1;Ontology_term=GO:0006810,GO:0042626;gbkey=CDS;gene=oppD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269182.1;locus_tag=TS60_RS01005;product=oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_011166384.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	90412	92280	.	+	.	ID=gene-TS60_RS01010;Name=TS60_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01010;old_locus_tag=TS60_0215
NZ_LAEX01000002.1	Protein Homology	CDS	90412	92280	.	+	0	ID=cds-WP_015545443.1;Parent=gene-TS60_RS01010;Dbxref=GenBank:WP_015545443.1;Name=WP_015545443.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545443.1;locus_tag=TS60_RS01010;product=ATP-binding cassette domain-containing protein;protein_id=WP_015545443.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	92297	95440	.	+	.	ID=gene-TS60_RS01015;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=TS60_RS01015;old_locus_tag=TS60_0216
NZ_LAEX01000002.1	Protein Homology	CDS	92297	95440	.	+	0	ID=cds-WP_045596430.1;Parent=gene-TS60_RS01015;Dbxref=GenBank:WP_045596430.1;Name=WP_045596430.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=oppA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166386.1;locus_tag=TS60_RS01015;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_045596430.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	95722	96306	.	+	.	ID=gene-TS60_RS05525;Name=TS60_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05525;old_locus_tag=TS60_0217
NZ_LAEX01000002.1	Protein Homology	CDS	95722	96306	.	+	0	ID=cds-WP_015545268.1;Parent=gene-TS60_RS05525;Dbxref=GenBank:WP_015545268.1;Name=WP_015545268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545268.1;locus_tag=TS60_RS05525;product=ApaLI family restriction endonuclease;protein_id=WP_015545268.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	96352	98310	.	+	.	ID=gene-TS60_RS01030;Name=TS60_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01030;old_locus_tag=TS60_0218
NZ_LAEX01000002.1	Protein Homology	CDS	96352	98310	.	+	0	ID=cds-WP_045596432.1;Parent=gene-TS60_RS01030;Dbxref=GenBank:WP_045596432.1;Name=WP_045596432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545315.1;locus_tag=TS60_RS01030;product=DNA-methyltransferase;protein_id=WP_045596432.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	98616	98921	.	+	.	ID=gene-TS60_RS07210;Name=TS60_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07210;old_locus_tag=TS60_0219
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	98616	98921	.	+	0	ID=cds-WP_236252311.1;Parent=gene-TS60_RS07210;Dbxref=GenBank:WP_236252311.1;Name=WP_236252311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07210;product=hypothetical protein;protein_id=WP_236252311.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	98878	99783	.	+	.	ID=gene-TS60_RS07215;Name=TS60_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07215;old_locus_tag=TS60_0220
NZ_LAEX01000002.1	Protein Homology	CDS	98878	99783	.	+	0	ID=cds-WP_236252312.1;Parent=gene-TS60_RS07215;Dbxref=GenBank:WP_236252312.1;Name=WP_236252312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045848.1;locus_tag=TS60_RS07215;product=Mbov_0396 family ICE element transmembrane protein;protein_id=WP_236252312.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	99841	100602	.	+	.	ID=gene-TS60_RS07220;Name=TS60_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07220;old_locus_tag=TS60_0221
NZ_LAEX01000002.1	Protein Homology	CDS	99841	100602	.	+	0	ID=cds-WP_011166390.1;Parent=gene-TS60_RS07220;Dbxref=GenBank:WP_011166390.1;Name=WP_011166390.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166390.1;locus_tag=TS60_RS07220;product=E3 binding domain-containing protein;protein_id=WP_011166390.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	100602	101063	.	+	.	ID=gene-TS60_RS01045;Name=TS60_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01045;old_locus_tag=TS60_0222
NZ_LAEX01000002.1	Protein Homology	CDS	100602	101063	.	+	0	ID=cds-WP_011166391.1;Parent=gene-TS60_RS01045;Dbxref=GenBank:WP_011166391.1;Name=WP_011166391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584583.1;locus_tag=TS60_RS01045;product=hypothetical protein;protein_id=WP_011166391.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	101145	101666	.	+	.	ID=gene-TS60_RS01050;Name=TS60_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01050;old_locus_tag=TS60_0223
NZ_LAEX01000002.1	Protein Homology	CDS	101145	101666	.	+	0	ID=cds-WP_011166392.1;Parent=gene-TS60_RS01050;Dbxref=GenBank:WP_011166392.1;Name=WP_011166392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166392.1;locus_tag=TS60_RS01050;product=hypothetical protein;protein_id=WP_011166392.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	101672	104116	.	+	.	ID=gene-TS60_RS01055;Name=TS60_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01055;old_locus_tag=TS60_0224
NZ_LAEX01000002.1	Protein Homology	CDS	101672	104116	.	+	0	ID=cds-WP_011166393.1;Parent=gene-TS60_RS01055;Dbxref=GenBank:WP_011166393.1;Name=WP_011166393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545300.1;locus_tag=TS60_RS01055;product=Mbov_0397 family ICE element conjugal transfer ATPase;protein_id=WP_011166393.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	104244	105164	.	+	.	ID=gene-TS60_RS01060;Name=TS60_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01060;old_locus_tag=TS60_0225
NZ_LAEX01000002.1	Protein Homology	CDS	104244	105164	.	+	0	ID=cds-WP_015545545.1;Parent=gene-TS60_RS01060;Dbxref=GenBank:WP_015545545.1;Name=WP_015545545.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545545.1;locus_tag=TS60_RS01060;product=Fic family protein;protein_id=WP_015545545.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	105154	105294	.	+	.	ID=gene-TS60_RS01065;Name=TS60_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01065;old_locus_tag=TS60_0226
NZ_LAEX01000002.1	Protein Homology	CDS	105154	105294	.	+	0	ID=cds-WP_011166395.1;Parent=gene-TS60_RS01065;Dbxref=GenBank:WP_011166395.1;Name=WP_011166395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697753.1;locus_tag=TS60_RS01065;product=hypothetical protein;protein_id=WP_011166395.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	105566	106018	.	+	.	ID=gene-TS60_RS01070;Name=TS60_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01070;old_locus_tag=TS60_0227
NZ_LAEX01000002.1	Protein Homology	CDS	105566	106018	.	+	0	ID=cds-WP_015545415.1;Parent=gene-TS60_RS01070;Dbxref=GenBank:WP_015545415.1;Name=WP_015545415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269475.1;locus_tag=TS60_RS01070;product=Panacea domain-containing protein;protein_id=WP_015545415.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	106539	107693	.	-	.	ID=gene-TS60_RS01075;Name=TS60_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01075;old_locus_tag=TS60_0228
NZ_LAEX01000002.1	Protein Homology	CDS	106539	107693	.	-	0	ID=cds-WP_011166397.1;Parent=gene-TS60_RS01075;Dbxref=GenBank:WP_011166397.1;Name=WP_011166397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545414.1;locus_tag=TS60_RS01075;product=hypothetical protein;protein_id=WP_011166397.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	107727	109013	.	-	.	ID=gene-TS60_RS01080;Name=TS60_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01080;old_locus_tag=TS60_0229
NZ_LAEX01000002.1	Protein Homology	CDS	107727	109013	.	-	0	ID=cds-WP_011166398.1;Parent=gene-TS60_RS01080;Dbxref=GenBank:WP_011166398.1;Name=WP_011166398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166398.1;locus_tag=TS60_RS01080;product=hypothetical protein;protein_id=WP_011166398.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	109261	110910	.	-	.	ID=gene-TS60_RS01085;Name=TS60_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01085;old_locus_tag=TS60_0230
NZ_LAEX01000002.1	Protein Homology	CDS	109261	110910	.	-	0	ID=cds-WP_080512640.1;Parent=gene-TS60_RS01085;Dbxref=GenBank:WP_080512640.1;Name=WP_080512640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166399.1;locus_tag=TS60_RS01085;product=hypothetical protein;protein_id=WP_080512640.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	110862	111545	.	-	.	ID=gene-TS60_RS01090;Name=TS60_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01090;old_locus_tag=TS60_0231
NZ_LAEX01000002.1	Protein Homology	CDS	110862	111545	.	-	0	ID=cds-WP_011166400.1;Parent=gene-TS60_RS01090;Dbxref=GenBank:WP_011166400.1;Name=WP_011166400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166400.1;locus_tag=TS60_RS01090;product=hypothetical protein;protein_id=WP_011166400.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	111913	112308	.	-	.	ID=gene-TS60_RS01095;Name=TS60_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01095;old_locus_tag=TS60_0232
NZ_LAEX01000002.1	Protein Homology	CDS	111913	112308	.	-	0	ID=cds-WP_011166401.1;Parent=gene-TS60_RS01095;Dbxref=GenBank:WP_011166401.1;Name=WP_011166401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166401.1;locus_tag=TS60_RS01095;product=hypothetical protein;protein_id=WP_011166401.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	112312	112980	.	-	.	ID=gene-TS60_RS01100;Name=TS60_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01100;old_locus_tag=TS60_0233
NZ_LAEX01000002.1	Protein Homology	CDS	112312	112980	.	-	0	ID=cds-WP_011166402.1;Parent=gene-TS60_RS01100;Dbxref=GenBank:WP_011166402.1;Name=WP_011166402.1;Ontology_term=GO:0009307,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269302.1;locus_tag=TS60_RS01100;product=DNA adenine methylase;protein_id=WP_011166402.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	112981	113784	.	-	.	ID=gene-TS60_RS01105;Name=TS60_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01105;old_locus_tag=TS60_0234
NZ_LAEX01000002.1	Protein Homology	CDS	112981	113784	.	-	0	ID=cds-WP_011166403.1;Parent=gene-TS60_RS01105;Dbxref=GenBank:WP_011166403.1;Name=WP_011166403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387183.1;locus_tag=TS60_RS01105;product=hypothetical protein;protein_id=WP_011166403.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	113863	114276	.	-	.	ID=gene-TS60_RS01110;Name=TS60_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01110;old_locus_tag=TS60_0235
NZ_LAEX01000002.1	Protein Homology	CDS	113863	114276	.	-	0	ID=cds-WP_011166404.1;Parent=gene-TS60_RS01110;Dbxref=GenBank:WP_011166404.1;Name=WP_011166404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387182.1;locus_tag=TS60_RS01110;product=hypothetical protein;protein_id=WP_011166404.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	114336	114938	.	-	.	ID=gene-TS60_RS01115;Name=TS60_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01115;old_locus_tag=TS60_0236
NZ_LAEX01000002.1	Protein Homology	CDS	114336	114938	.	-	0	ID=cds-WP_015545569.1;Parent=gene-TS60_RS01115;Dbxref=GenBank:WP_015545569.1;Name=WP_015545569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584594.1;locus_tag=TS60_RS01115;product=BspA family leucine-rich repeat surface protein;protein_id=WP_015545569.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	115280	115624	.	-	.	ID=gene-TS60_RS01120;Name=TS60_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01120;old_locus_tag=TS60_0237
NZ_LAEX01000002.1	Protein Homology	CDS	115280	115624	.	-	0	ID=cds-WP_015545593.1;Parent=gene-TS60_RS01120;Dbxref=GenBank:WP_015545593.1;Name=WP_015545593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545593.1;locus_tag=TS60_RS01120;product=Mbov_0395 family pilin-like conjugal transfer protein;protein_id=WP_015545593.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	115611	116192	.	-	.	ID=gene-TS60_RS01125;Name=TS60_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01125;old_locus_tag=TS60_0238
NZ_LAEX01000002.1	Protein Homology	CDS	115611	116192	.	-	0	ID=cds-WP_015545665.1;Parent=gene-TS60_RS01125;Dbxref=GenBank:WP_015545665.1;Name=WP_015545665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545665.1;locus_tag=TS60_RS01125;product=hypothetical protein;protein_id=WP_015545665.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	116329	116685	.	-	.	ID=gene-TS60_RS01130;Name=TS60_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01130;old_locus_tag=TS60_0239
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	116329	116685	.	-	0	ID=cds-WP_227716904.1;Parent=gene-TS60_RS01130;Dbxref=GenBank:WP_227716904.1;Name=WP_227716904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS01130;product=hypothetical protein;protein_id=WP_227716904.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	116903	117208	.	-	.	ID=gene-TS60_RS01135;Name=TS60_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01135;old_locus_tag=TS60_0241
NZ_LAEX01000002.1	Protein Homology	CDS	116903	117208	.	-	0	ID=cds-WP_015545489.1;Parent=gene-TS60_RS01135;Dbxref=GenBank:WP_015545489.1;Name=WP_015545489.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035082.1;locus_tag=TS60_RS01135;product=single-stranded DNA-binding protein;protein_id=WP_015545489.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	117321	117806	.	-	.	ID=gene-TS60_RS01140;Name=TS60_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01140;old_locus_tag=TS60_0242
NZ_LAEX01000002.1	Protein Homology	CDS	117321	117806	.	-	0	ID=cds-WP_011166410.1;Parent=gene-TS60_RS01140;Dbxref=GenBank:WP_011166410.1;Name=WP_011166410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166410.1;locus_tag=TS60_RS01140;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166410.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	117860	119152	.	-	.	ID=gene-TS60_RS01145;Name=TS60_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01145;old_locus_tag=TS60_0243
NZ_LAEX01000002.1	Protein Homology	CDS	117860	119152	.	-	0	ID=cds-WP_011166411.1;Parent=gene-TS60_RS01145;Dbxref=GenBank:WP_011166411.1;Name=WP_011166411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584600.1;locus_tag=TS60_RS01145;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166411.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	119207	119338	.	-	.	ID=gene-TS60_RS01150;Name=TS60_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01150;old_locus_tag=TS60_0244
NZ_LAEX01000002.1	Protein Homology	CDS	119207	119338	.	-	0	ID=cds-WP_011166412.1;Parent=gene-TS60_RS01150;Dbxref=GenBank:WP_011166412.1;Name=WP_011166412.1;Ontology_term=GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;inference=COORDINATES: protein motif:HMM:NF012442.6;locus_tag=TS60_RS01150;product=HU family DNA-binding protein;protein_id=WP_011166412.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	119712	119849	.	+	.	ID=gene-TS60_RS06390;Name=TS60_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06390;old_locus_tag=TS60_0245
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	119712	119849	.	+	0	ID=cds-WP_227716905.1;Parent=gene-TS60_RS06390;Dbxref=GenBank:WP_227716905.1;Name=WP_227716905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS06390;product=hypothetical protein;protein_id=WP_227716905.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	119857	121268	.	-	.	ID=gene-TS60_RS06395;Name=TS60_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06395
NZ_LAEX01000002.1	Protein Homology	CDS	120785	121268	.	-	0	ID=cds-WP_144245595.1;Parent=gene-TS60_RS06395;Dbxref=GenBank:WP_144245595.1;Name=WP_144245595.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06395;product=IS3-like element IS1296 family transposase;protein_id=WP_144245595.1;transl_table=4
NZ_LAEX01000002.1	Protein Homology	CDS	119857	120785	.	-	2	ID=cds-WP_144245595.1;Parent=gene-TS60_RS06395;Dbxref=GenBank:WP_144245595.1;Name=WP_144245595.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06395;product=IS3-like element IS1296 family transposase;protein_id=WP_144245595.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	121643	122170	.	+	.	ID=gene-TS60_RS07225;Name=TS60_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07225;old_locus_tag=TS60_0248
NZ_LAEX01000002.1	Protein Homology	CDS	121643	122170	.	+	0	ID=cds-WP_230592196.1;Parent=gene-TS60_RS07225;Dbxref=GenBank:WP_230592196.1;Name=WP_230592196.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=TS60_RS07225;product=DDE-type integrase/transposase/recombinase;protein_id=WP_230592196.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	122110	122313	.	+	.	ID=gene-TS60_RS07230;Name=TS60_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07230;old_locus_tag=TS60_0249
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	122110	122313	.	+	0	ID=cds-WP_230592172.1;Parent=gene-TS60_RS07230;Dbxref=GenBank:WP_230592172.1;Name=WP_230592172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07230;product=hypothetical protein;protein_id=WP_230592172.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	122557	124386	.	+	.	ID=gene-TS60_RS01170;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=TS60_RS01170;old_locus_tag=TS60_0250
NZ_LAEX01000002.1	Protein Homology	CDS	122557	124386	.	+	0	ID=cds-WP_045596438.1;Parent=gene-TS60_RS01170;Dbxref=GenBank:WP_045596438.1;Name=WP_045596438.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862576.1;locus_tag=TS60_RS01170;product=translational GTPase TypA;protein_id=WP_045596438.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	124418	125182	.	-	.	ID=gene-TS60_RS01175;Name=TS60_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01175;old_locus_tag=TS60_0251
NZ_LAEX01000002.1	Protein Homology	CDS	124418	125182	.	-	0	ID=cds-WP_011166415.1;Parent=gene-TS60_RS01175;Dbxref=GenBank:WP_011166415.1;Name=WP_011166415.1;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269226.1;locus_tag=TS60_RS01175;product=Eco47II family restriction endonuclease;protein_id=WP_011166415.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	125175	126200	.	-	.	ID=gene-TS60_RS01180;Name=TS60_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01180;old_locus_tag=TS60_0252
NZ_LAEX01000002.1	Protein Homology	CDS	125175	126200	.	-	0	ID=cds-WP_011166416.1;Parent=gene-TS60_RS01180;Dbxref=GenBank:WP_011166416.1;Name=WP_011166416.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269225.1;locus_tag=TS60_RS01180;product=DNA cytosine methyltransferase;protein_id=WP_011166416.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	126193	127464	.	-	.	ID=gene-TS60_RS01185;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=TS60_RS01185;old_locus_tag=TS60_0253
NZ_LAEX01000002.1	Protein Homology	CDS	126193	127464	.	-	0	ID=cds-WP_015545663.1;Parent=gene-TS60_RS01185;Dbxref=GenBank:WP_015545663.1;Name=WP_015545663.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729349.1;locus_tag=TS60_RS01185;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_015545663.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	127454	128347	.	-	.	ID=gene-TS60_RS01190;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=TS60_RS01190;old_locus_tag=TS60_0254
NZ_LAEX01000002.1	Protein Homology	CDS	127454	128347	.	-	0	ID=cds-WP_011166418.1;Parent=gene-TS60_RS01190;Dbxref=GenBank:WP_011166418.1;Name=WP_011166418.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269224.1;locus_tag=TS60_RS01190;product=guanylate kinase;protein_id=WP_011166418.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	128350	128922	.	-	.	ID=gene-TS60_RS01195;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=TS60_RS01195;old_locus_tag=TS60_0255
NZ_LAEX01000002.1	Protein Homology	CDS	128350	128922	.	-	0	ID=cds-WP_011166419.1;Parent=gene-TS60_RS01195;Dbxref=GenBank:WP_011166419.1;Name=WP_011166419.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729348.1;locus_tag=TS60_RS01195;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_011166419.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	128981	129583	.	+	.	ID=gene-TS60_RS01200;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=TS60_RS01200;old_locus_tag=TS60_0256
NZ_LAEX01000002.1	Protein Homology	CDS	128981	129583	.	+	0	ID=cds-WP_011166420.1;Parent=gene-TS60_RS01200;Dbxref=GenBank:WP_011166420.1;Name=WP_011166420.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729347.1;locus_tag=TS60_RS01200;product=peptide deformylase;protein_id=WP_011166420.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	129773	130318	.	+	.	ID=gene-TS60_RS01205;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=TS60_RS01205;old_locus_tag=TS60_0257
NZ_LAEX01000002.1	Protein Homology	CDS	129773	130318	.	+	0	ID=cds-WP_011166421.1;Parent=gene-TS60_RS01205;Dbxref=GenBank:WP_011166421.1;Name=WP_011166421.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269221.1;locus_tag=TS60_RS01205;product=translation initiation factor IF-3;protein_id=WP_011166421.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	130344	130535	.	+	.	ID=gene-TS60_RS01210;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=TS60_RS01210;old_locus_tag=TS60_0258
NZ_LAEX01000002.1	Protein Homology	CDS	130344	130535	.	+	0	ID=cds-WP_011166422.1;Parent=gene-TS60_RS01210;Dbxref=GenBank:WP_011166422.1;Name=WP_011166422.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166422.1;locus_tag=TS60_RS01210;product=50S ribosomal protein L35;protein_id=WP_011166422.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	130554	130919	.	+	.	ID=gene-TS60_RS01215;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=TS60_RS01215;old_locus_tag=TS60_0259
NZ_LAEX01000002.1	Protein Homology	CDS	130554	130919	.	+	0	ID=cds-WP_011166423.1;Parent=gene-TS60_RS01215;Dbxref=GenBank:WP_011166423.1;Name=WP_011166423.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166423.1;locus_tag=TS60_RS01215;product=50S ribosomal protein L20;protein_id=WP_011166423.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	131284	132339	.	+	.	ID=gene-TS60_RS01220;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=TS60_RS01220;old_locus_tag=TS60_0261
NZ_LAEX01000002.1	Protein Homology	CDS	131284	132339	.	+	0	ID=cds-WP_011166424.1;Parent=gene-TS60_RS01220;Dbxref=GenBank:WP_011166424.1;Name=WP_011166424.1;Ontology_term=GO:1902047,GO:0005524;gbkey=CDS;gene=potA;go_function=ATP binding|0005524||IEA;go_process=polyamine transmembrane transport|1902047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269219.1;locus_tag=TS60_RS01220;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_011166424.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	132339	133331	.	+	.	ID=gene-TS60_RS01225;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=TS60_RS01225;old_locus_tag=TS60_0262
NZ_LAEX01000002.1	Protein Homology	CDS	132339	133331	.	+	0	ID=cds-WP_011166425.1;Parent=gene-TS60_RS01225;Dbxref=GenBank:WP_011166425.1;Name=WP_011166425.1;Ontology_term=GO:0015846,GO:0022857;gbkey=CDS;gene=potB;go_function=transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166425.1;locus_tag=TS60_RS01225;product=spermidine/putrescine ABC transporter permease;protein_id=WP_011166425.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	133316	136444	.	+	.	ID=gene-TS60_RS01230;Name=potCD;gbkey=Gene;gene=potCD;gene_biotype=protein_coding;locus_tag=TS60_RS01230;old_locus_tag=TS60_0263
NZ_LAEX01000002.1	Protein Homology	CDS	133316	136444	.	+	0	ID=cds-WP_011166426.1;Parent=gene-TS60_RS01230;Dbxref=GenBank:WP_011166426.1;Name=WP_011166426.1;Ontology_term=GO:0015846,GO:0022857;gbkey=CDS;gene=potCD;go_function=transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862571.1;locus_tag=TS60_RS01230;product=spermidine/putrescine ABC transporter permease/substrate-binding protein;protein_id=WP_011166426.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	136790	137044	.	-	.	ID=gene-TS60_RS07235;Name=TS60_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07235;old_locus_tag=TS60_0264
NZ_LAEX01000002.1	GeneMarkS-2+	CDS	136790	137044	.	-	0	ID=cds-WP_011166427.1;Parent=gene-TS60_RS07235;Dbxref=GenBank:WP_011166427.1;Name=WP_011166427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07235;product=hypothetical protein;protein_id=WP_011166427.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	137089	137748	.	-	.	ID=gene-TS60_RS01240;Name=TS60_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01240;old_locus_tag=TS60_0265
NZ_LAEX01000002.1	Protein Homology	CDS	137089	137748	.	-	0	ID=cds-WP_015545285.1;Parent=gene-TS60_RS01240;Dbxref=GenBank:WP_015545285.1;Name=WP_015545285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.6;locus_tag=TS60_RS01240;product=Abi family protein;protein_id=WP_015545285.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	137881	138558	.	-	.	ID=gene-TS60_RS01245;Name=TS60_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01245;old_locus_tag=TS60_0266
NZ_LAEX01000002.1	Protein Homology	CDS	137881	138558	.	-	0	ID=cds-WP_015545546.1;Parent=gene-TS60_RS01245;Dbxref=GenBank:WP_015545546.1;Name=WP_015545546.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545546.1;locus_tag=TS60_RS01245;product=chromate transporter;protein_id=WP_015545546.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	138558	139137	.	-	.	ID=gene-TS60_RS07775;Name=TS60_RS07775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07775;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	138558	139137	.	-	0	ID=cds-TS60_RS07775;Parent=gene-TS60_RS07775;Note=frameshifted;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387087.1;locus_tag=TS60_RS07775;product=chromate transporter;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	139156	139269	.	-	.	ID=gene-TS60_RS06950;Name=TS60_RS06950;end_range=139269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06950;partial=true;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	139156	139269	.	-	0	ID=cds-TS60_RS06950;Parent=gene-TS60_RS06950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=139269,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06950;partial=true;product=IS3 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	139503	140915	.	+	.	ID=gene-TS60_RS01255;Name=TS60_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01255;old_locus_tag=TS60_0269
NZ_LAEX01000002.1	Protein Homology	CDS	139503	140915	.	+	0	ID=cds-WP_011166430.1;Parent=gene-TS60_RS01255;Dbxref=GenBank:WP_011166430.1;Name=WP_011166430.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS01255;product=IS1634-like element ISMmy1 family transposase;protein_id=WP_011166430.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	140939	142257	.	-	.	ID=gene-TS60_RS06405;Name=TS60_RS06405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06405;partial=true;pseudo=true;start_range=.,140939
NZ_LAEX01000002.1	Protein Homology	CDS	140939	142257	.	-	0	ID=cds-TS60_RS06405;Parent=gene-TS60_RS06405;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06405;partial=true;product=IS3-like element IS1296 family transposase;pseudo=true;start_range=.,140939;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	142511	143806	.	+	.	ID=gene-TS60_RS01270;Name=TS60_RS01270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01270;old_locus_tag=TS60_0272;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	142511	143806	.	+	0	ID=cds-TS60_RS01270;Parent=gene-TS60_RS01270;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269195.1;locus_tag=TS60_RS01270;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	143922	145276	.	+	.	ID=gene-TS60_RS01275;Name=TS60_RS01275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01275;old_locus_tag=TS60_0274;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	143922	145276	.	+	0	ID=cds-TS60_RS01275;Parent=gene-TS60_RS01275;Note=frameshifted;Ontology_term=GO:0019538,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862568.1;locus_tag=TS60_RS01275;product=M17 family metallopeptidase;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	145292	145975	.	+	.	ID=gene-TS60_RS01280;Name=TS60_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01280;old_locus_tag=TS60_0275
NZ_LAEX01000002.1	Protein Homology	CDS	145292	145975	.	+	0	ID=cds-WP_011166435.1;Parent=gene-TS60_RS01280;Dbxref=GenBank:WP_011166435.1;Name=WP_011166435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862567.1;locus_tag=TS60_RS01280;product=restriction endonuclease subunit S domain-containing protein;protein_id=WP_011166435.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	145975	147765	.	+	.	ID=gene-TS60_RS01285;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=TS60_RS01285;old_locus_tag=TS60_0276
NZ_LAEX01000002.1	Protein Homology	CDS	145975	147765	.	+	0	ID=cds-WP_011166436.1;Parent=gene-TS60_RS01285;Dbxref=GenBank:WP_011166436.1;Name=WP_011166436.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004428412.1;locus_tag=TS60_RS01285;product=oligoendopeptidase F;protein_id=WP_011166436.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	147838	149249	.	+	.	ID=gene-TS60_RS06410;Name=TS60_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06410
NZ_LAEX01000002.1	Protein Homology	CDS	147838	148321	.	+	0	ID=cds-WP_139552553.1;Parent=gene-TS60_RS06410;Dbxref=GenBank:WP_139552553.1;Name=WP_139552553.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06410;product=IS3-like element IS1296 family transposase;protein_id=WP_139552553.1;transl_table=4
NZ_LAEX01000002.1	Protein Homology	CDS	148321	149249	.	+	2	ID=cds-WP_139552553.1;Parent=gene-TS60_RS06410;Dbxref=GenBank:WP_139552553.1;Name=WP_139552553.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06410;product=IS3-like element IS1296 family transposase;protein_id=WP_139552553.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	149356	151020	.	+	.	ID=gene-TS60_RS01300;Name=TS60_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01300;old_locus_tag=TS60_0279
NZ_LAEX01000002.1	Protein Homology	CDS	149356	151020	.	+	0	ID=cds-WP_011166438.1;Parent=gene-TS60_RS01300;Dbxref=GenBank:WP_011166438.1;Name=WP_011166438.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166438.1;locus_tag=TS60_RS01300;product=LppA family lipoprotein;protein_id=WP_011166438.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	gene	151054	151935	.	-	.	ID=gene-TS60_RS01305;Name=TS60_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01305;old_locus_tag=TS60_0280
NZ_LAEX01000002.1	Protein Homology	CDS	151054	151935	.	-	0	ID=cds-WP_011166439.1;Parent=gene-TS60_RS01305;Dbxref=GenBank:WP_011166439.1;Name=WP_011166439.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269187.1;locus_tag=TS60_RS01305;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011166439.1;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	152256	153548	.	+	.	ID=gene-TS60_RS01310;Name=TS60_RS01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01310;old_locus_tag=TS60_0282;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	152256	153548	.	+	0	ID=cds-TS60_RS01310;Parent=gene-TS60_RS01310;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729249.1;locus_tag=TS60_RS01310;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	153858	154043	.	+	.	ID=gene-TS60_RS01315;Name=TS60_RS01315;end_range=154043,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01315;old_locus_tag=TS60_0283;partial=true;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	153858	154043	.	+	0	ID=cds-TS60_RS01315;Parent=gene-TS60_RS01315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=154043,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS01315;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000002.1	RefSeq	pseudogene	154154	155051	.	+	.	ID=gene-TS60_RS01320;Name=TS60_RS01320;end_range=155051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01320;old_locus_tag=TS60_0284;partial=true;pseudo=true
NZ_LAEX01000002.1	Protein Homology	CDS	154154	155051	.	+	0	ID=cds-TS60_RS01320;Parent=gene-TS60_RS01320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=155051,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01320;partial=true;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
##sequence-region NZ_LAEX01000003.1 1 113854
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000003.1	RefSeq	region	1	113854	.	+	.	ID=NZ_LAEX01000003.1:1..113854;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000003.1	RefSeq	gene	113	1786	.	+	.	ID=gene-TS60_RS01325;Name=TS60_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01325;old_locus_tag=TS60_0285
NZ_LAEX01000003.1	Protein Homology	CDS	113	1786	.	+	0	ID=cds-WP_011166528.1;Parent=gene-TS60_RS01325;Dbxref=GenBank:WP_011166528.1;Name=WP_011166528.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01325;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166528.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	1876	3137	.	+	.	ID=gene-TS60_RS01335;Name=TS60_RS01335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01335;old_locus_tag=TS60_0287;partial=true;pseudo=true;start_range=.,1876
NZ_LAEX01000003.1	Protein Homology	CDS	1876	3137	.	+	0	ID=cds-TS60_RS01335;Parent=gene-TS60_RS01335;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS01335;partial=true;product=IS3-like element IS1296 family transposase;pseudo=true;start_range=.,1876;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	3519	3695	.	+	.	ID=gene-TS60_RS07250;Name=TS60_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07250;old_locus_tag=TS60_0288
NZ_LAEX01000003.1	Protein Homology	CDS	3519	3695	.	+	0	ID=cds-WP_011166444.1;Parent=gene-TS60_RS07250;Dbxref=GenBank:WP_011166444.1;Name=WP_011166444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166444.1;locus_tag=TS60_RS07250;product=hypothetical protein;protein_id=WP_011166444.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	3728	3910	.	+	.	ID=gene-TS60_RS07255;Name=TS60_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07255
NZ_LAEX01000003.1	Protein Homology	CDS	3728	3910	.	+	0	ID=cds-WP_230592197.1;Parent=gene-TS60_RS07255;Dbxref=GenBank:WP_230592197.1;Name=WP_230592197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.6;locus_tag=TS60_RS07255;product=DUF285 domain-containing protein;protein_id=WP_230592197.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	4227	5135	.	-	.	ID=gene-TS60_RS01345;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=TS60_RS01345;old_locus_tag=TS60_0289
NZ_LAEX01000003.1	Protein Homology	CDS	4227	5135	.	-	0	ID=cds-WP_011166445.1;Parent=gene-TS60_RS01345;Dbxref=GenBank:WP_011166445.1;Name=WP_011166445.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166445.1;locus_tag=TS60_RS01345;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_011166445.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	5138	5758	.	-	.	ID=gene-TS60_RS01350;Name=TS60_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01350;old_locus_tag=TS60_0290
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	5138	5758	.	-	0	ID=cds-WP_015545503.1;Parent=gene-TS60_RS01350;Dbxref=GenBank:WP_015545503.1;Name=WP_015545503.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS01350;product=PTS transporter subunit EIIC;protein_id=WP_015545503.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	5855	7528	.	+	.	ID=gene-TS60_RS01355;Name=TS60_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01355;old_locus_tag=TS60_0291
NZ_LAEX01000003.1	Protein Homology	CDS	5855	7528	.	+	0	ID=cds-WP_011166446.1;Parent=gene-TS60_RS01355;Dbxref=GenBank:WP_011166446.1;Name=WP_011166446.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01355;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166446.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	7598	8731	.	-	.	ID=gene-TS60_RS01360;Name=TS60_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01360;old_locus_tag=TS60_0292
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	7598	8731	.	-	0	ID=cds-WP_011166447.1;Parent=gene-TS60_RS01360;Dbxref=GenBank:WP_011166447.1;Name=WP_011166447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS01360;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_011166447.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	8850	9683	.	-	.	ID=gene-TS60_RS01365;Name=TS60_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01365;old_locus_tag=TS60_0293
NZ_LAEX01000003.1	Protein Homology	CDS	8850	9683	.	-	0	ID=cds-WP_015545360.1;Parent=gene-TS60_RS01365;Dbxref=GenBank:WP_015545360.1;Name=WP_015545360.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697990.1;locus_tag=TS60_RS01365;product=MurR/RpiR family transcriptional regulator;protein_id=WP_015545360.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	10074	11429	.	+	.	ID=gene-TS60_RS01375;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=TS60_RS01375;old_locus_tag=TS60_0295
NZ_LAEX01000003.1	Protein Homology	CDS	10074	11429	.	+	0	ID=cds-WP_011166450.1;Parent=gene-TS60_RS01375;Dbxref=GenBank:WP_011166450.1;Name=WP_011166450.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363711.1;locus_tag=TS60_RS01375;product=phosphopyruvate hydratase;protein_id=WP_011166450.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	11496	12317	.	+	.	ID=gene-TS60_RS01380;Name=TS60_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01380;old_locus_tag=TS60_0296
NZ_LAEX01000003.1	Protein Homology	CDS	11496	12317	.	+	0	ID=cds-WP_011166451.1;Parent=gene-TS60_RS01380;Dbxref=GenBank:WP_011166451.1;Name=WP_011166451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269229.1;locus_tag=TS60_RS01380;product=phosphatase PAP2 family protein;protein_id=WP_011166451.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	12319	12750	.	+	.	ID=gene-TS60_RS01385;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=TS60_RS01385;old_locus_tag=TS60_0297
NZ_LAEX01000003.1	Protein Homology	CDS	12319	12750	.	+	0	ID=cds-WP_011166452.1;Parent=gene-TS60_RS01385;Dbxref=GenBank:WP_011166452.1;Name=WP_011166452.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269230.1;locus_tag=TS60_RS01385;product=Holliday junction resolvase RuvX;protein_id=WP_011166452.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	12756	13328	.	+	.	ID=gene-TS60_RS01390;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=TS60_RS01390;old_locus_tag=TS60_0298
NZ_LAEX01000003.1	Protein Homology	CDS	12756	13328	.	+	0	ID=cds-WP_011166453.1;Parent=gene-TS60_RS01390;Dbxref=GenBank:WP_011166453.1;Name=WP_011166453.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166453.1;locus_tag=TS60_RS01390;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011166453.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	13373	14152	.	-	.	ID=gene-TS60_RS01395;Name=TS60_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01395;old_locus_tag=TS60_0299
NZ_LAEX01000003.1	Protein Homology	CDS	13373	14152	.	-	0	ID=cds-WP_011166454.1;Parent=gene-TS60_RS01395;Dbxref=GenBank:WP_011166454.1;Name=WP_011166454.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269232.1;locus_tag=TS60_RS01395;product=MIP/aquaporin family protein;protein_id=WP_011166454.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	14188	15705	.	-	.	ID=gene-TS60_RS01400;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=TS60_RS01400;old_locus_tag=TS60_0300
NZ_LAEX01000003.1	Protein Homology	CDS	14188	15705	.	-	0	ID=cds-WP_015545468.1;Parent=gene-TS60_RS01400;Dbxref=GenBank:WP_015545468.1;Name=WP_015545468.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729427.1;locus_tag=TS60_RS01400;product=glycerol kinase GlpK;protein_id=WP_015545468.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	15722	16885	.	-	.	ID=gene-TS60_RS01405;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=TS60_RS01405;old_locus_tag=TS60_0301
NZ_LAEX01000003.1	Protein Homology	CDS	15722	16885	.	-	0	ID=cds-WP_015545438.1;Parent=gene-TS60_RS01405;Dbxref=GenBank:WP_015545438.1;Name=WP_015545438.1;gbkey=CDS;gene=glpO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862587.1;locus_tag=TS60_RS01405;product=type 2 glycerol-3-phosphate oxidase;protein_id=WP_015545438.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	17219	18199	.	+	.	ID=gene-TS60_RS01410;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=TS60_RS01410;old_locus_tag=TS60_0302
NZ_LAEX01000003.1	Protein Homology	CDS	17219	18199	.	+	0	ID=cds-WP_045596478.1;Parent=gene-TS60_RS01410;Dbxref=GenBank:WP_045596478.1;Name=WP_045596478.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697981.1;locus_tag=TS60_RS01410;product=6-phosphofructokinase;protein_id=WP_045596478.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	18271	19707	.	+	.	ID=gene-TS60_RS01415;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=TS60_RS01415;old_locus_tag=TS60_0303
NZ_LAEX01000003.1	Protein Homology	CDS	18271	19707	.	+	0	ID=cds-WP_045596463.1;Parent=gene-TS60_RS01415;Dbxref=GenBank:WP_045596463.1;Name=WP_045596463.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862588.1;locus_tag=TS60_RS01415;product=pyruvate kinase;protein_id=WP_045596463.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	19974	21893	.	+	.	ID=gene-TS60_RS01420;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=TS60_RS01420;old_locus_tag=TS60_0304
NZ_LAEX01000003.1	Protein Homology	CDS	19974	21893	.	+	0	ID=cds-WP_011166459.1;Parent=gene-TS60_RS01420;Dbxref=GenBank:WP_011166459.1;Name=WP_011166459.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862589.1;locus_tag=TS60_RS01420;product=threonine--tRNA ligase;protein_id=WP_011166459.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	22567	23931	.	+	.	ID=gene-TS60_RS01425;Name=TS60_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01425;old_locus_tag=TS60_0305
NZ_LAEX01000003.1	Protein Homology	CDS	22567	23931	.	+	0	ID=cds-WP_011166460.1;Parent=gene-TS60_RS01425;Dbxref=GenBank:WP_011166460.1;Name=WP_011166460.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545267.1;locus_tag=TS60_RS01425;product=FAD-dependent oxidoreductase;protein_id=WP_011166460.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	23934	24938	.	+	.	ID=gene-TS60_RS01430;Name=TS60_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01430;old_locus_tag=TS60_0306
NZ_LAEX01000003.1	Protein Homology	CDS	23934	24938	.	+	0	ID=cds-WP_045596465.1;Parent=gene-TS60_RS01430;Dbxref=GenBank:WP_045596465.1;Name=WP_045596465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862590.1;locus_tag=TS60_RS01430;product=lipoate--protein ligase;protein_id=WP_045596465.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	24982	26094	.	+	.	ID=gene-TS60_RS01435;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=TS60_RS01435;old_locus_tag=TS60_0307
NZ_LAEX01000003.1	Protein Homology	CDS	24982	26094	.	+	0	ID=cds-WP_011166462.1;Parent=gene-TS60_RS01435;Dbxref=GenBank:WP_011166462.1;Name=WP_011166462.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697977.1;locus_tag=TS60_RS01435;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_011166462.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	26094	27083	.	+	.	ID=gene-TS60_RS01440;Name=TS60_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01440;old_locus_tag=TS60_0308
NZ_LAEX01000003.1	Protein Homology	CDS	26094	27083	.	+	0	ID=cds-WP_013447584.1;Parent=gene-TS60_RS01440;Dbxref=GenBank:WP_013447584.1;Name=WP_013447584.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697976.1;locus_tag=TS60_RS01440;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_013447584.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	27112	28398	.	+	.	ID=gene-TS60_RS01445;Name=TS60_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01445;old_locus_tag=TS60_0309
NZ_LAEX01000003.1	Protein Homology	CDS	27112	28398	.	+	0	ID=cds-WP_011166464.1;Parent=gene-TS60_RS01445;Dbxref=GenBank:WP_011166464.1;Name=WP_011166464.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387115.1;locus_tag=TS60_RS01445;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_011166464.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	28417	30204	.	+	.	ID=gene-TS60_RS01450;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=TS60_RS01450;old_locus_tag=TS60_0310
NZ_LAEX01000003.1	Protein Homology	CDS	28417	30204	.	+	0	ID=cds-WP_011166465.1;Parent=gene-TS60_RS01450;Dbxref=GenBank:WP_011166465.1;Name=WP_011166465.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:TIGR01350.1;locus_tag=TS60_RS01450;product=dihydrolipoyl dehydrogenase;protein_id=WP_011166465.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	30226	31194	.	+	.	ID=gene-TS60_RS01455;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=TS60_RS01455;old_locus_tag=TS60_0311
NZ_LAEX01000003.1	Protein Homology	CDS	30226	31194	.	+	0	ID=cds-WP_011166466.1;Parent=gene-TS60_RS01455;Dbxref=GenBank:WP_011166466.1;Name=WP_011166466.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697973.1;locus_tag=TS60_RS01455;product=phosphate acetyltransferase;protein_id=WP_011166466.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	31207	32388	.	+	.	ID=gene-TS60_RS01460;Name=TS60_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01460;old_locus_tag=TS60_0312
NZ_LAEX01000003.1	Protein Homology	CDS	31207	32388	.	+	0	ID=cds-WP_011166467.1;Parent=gene-TS60_RS01460;Dbxref=GenBank:WP_011166467.1;Name=WP_011166467.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862594.1;locus_tag=TS60_RS01460;product=acetate kinase;protein_id=WP_011166467.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	32458	34413	.	+	.	ID=gene-TS60_RS01465;Name=TS60_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01465;old_locus_tag=TS60_0313
NZ_LAEX01000003.1	Protein Homology	CDS	32458	34413	.	+	0	ID=cds-WP_011166468.1;Parent=gene-TS60_RS01465;Dbxref=GenBank:WP_011166468.1;Name=WP_011166468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387119.1;locus_tag=TS60_RS01465;product=MIP family Ig-specific serine endopeptidase;protein_id=WP_011166468.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	34423	34845	.	+	.	ID=gene-TS60_RS01470;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=TS60_RS01470;old_locus_tag=TS60_0314
NZ_LAEX01000003.1	Protein Homology	CDS	34423	34845	.	+	0	ID=cds-WP_011166469.1;Parent=gene-TS60_RS01470;Dbxref=GenBank:WP_011166469.1;Name=WP_011166469.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387120.1;locus_tag=TS60_RS01470;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_011166469.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	34939	36660	.	+	.	ID=gene-TS60_RS01475;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=TS60_RS01475;old_locus_tag=TS60_0315
NZ_LAEX01000003.1	Protein Homology	CDS	34939	36660	.	+	0	ID=cds-WP_011166470.1;Parent=gene-TS60_RS01475;Dbxref=GenBank:WP_011166470.1;Name=WP_011166470.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545277.1;locus_tag=TS60_RS01475;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_011166470.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	36740	37204	.	+	.	ID=gene-TS60_RS01480;Name=TS60_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01480;old_locus_tag=TS60_0316
NZ_LAEX01000003.1	Protein Homology	CDS	36740	37204	.	+	0	ID=cds-WP_011166471.1;Parent=gene-TS60_RS01480;Dbxref=GenBank:WP_011166471.1;Name=WP_011166471.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447592.1;locus_tag=TS60_RS01480;product=PTS sugar transporter subunit IIA;protein_id=WP_011166471.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	37568	38194	.	+	.	ID=gene-TS60_RS01490;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=TS60_RS01490;old_locus_tag=TS60_0317
NZ_LAEX01000003.1	Protein Homology	CDS	37568	38194	.	+	0	ID=cds-WP_011166473.1;Parent=gene-TS60_RS01490;Dbxref=GenBank:WP_011166473.1;Name=WP_011166473.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697967.1;locus_tag=TS60_RS01490;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_011166473.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	38202	38597	.	+	.	ID=gene-TS60_RS01495;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=TS60_RS01495;old_locus_tag=TS60_0318
NZ_LAEX01000003.1	Protein Homology	CDS	38202	38597	.	+	0	ID=cds-WP_015545461.1;Parent=gene-TS60_RS01495;Dbxref=GenBank:WP_015545461.1;Name=WP_015545461.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545461.1;locus_tag=TS60_RS01495;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_015545461.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	38642	39268	.	-	.	ID=gene-TS60_RS01500;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=TS60_RS01500;old_locus_tag=TS60_0319
NZ_LAEX01000003.1	Protein Homology	CDS	38642	39268	.	-	0	ID=cds-WP_011166475.1;Parent=gene-TS60_RS01500;Dbxref=GenBank:WP_011166475.1;Name=WP_011166475.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429135.1;locus_tag=TS60_RS01500;product=30S ribosomal protein S4;protein_id=WP_011166475.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	39523	41310	.	+	.	ID=gene-TS60_RS01505;Name=TS60_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01505;old_locus_tag=TS60_0320
NZ_LAEX01000003.1	Protein Homology	CDS	39523	41310	.	+	0	ID=cds-WP_015545314.1;Parent=gene-TS60_RS01505;Dbxref=GenBank:WP_015545314.1;Name=WP_015545314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545314.1;locus_tag=TS60_RS01505;product=hypothetical protein;protein_id=WP_015545314.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	41318	42505	.	+	.	ID=gene-TS60_RS01510;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=TS60_RS01510;old_locus_tag=TS60_0321
NZ_LAEX01000003.1	Protein Homology	CDS	41318	42505	.	+	0	ID=cds-WP_011166477.1;Parent=gene-TS60_RS01510;Dbxref=GenBank:WP_011166477.1;Name=WP_011166477.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269250.1;locus_tag=TS60_RS01510;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_011166477.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	42638	44548	.	+	.	ID=gene-TS60_RS01515;Name=TS60_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01515;old_locus_tag=TS60_0322
NZ_LAEX01000003.1	Protein Homology	CDS	42638	44548	.	+	0	ID=cds-WP_011166478.1;Parent=gene-TS60_RS01515;Dbxref=GenBank:WP_011166478.1;Name=WP_011166478.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166478.1;locus_tag=TS60_RS01515;product=S41 family peptidase;protein_id=WP_011166478.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	44665	45483	.	+	.	ID=gene-TS60_RS07260;Name=TS60_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07260;old_locus_tag=TS60_0323
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	44665	45483	.	+	0	ID=cds-WP_011166479.1;Parent=gene-TS60_RS07260;Dbxref=GenBank:WP_011166479.1;Name=WP_011166479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07260;product=hypothetical protein;protein_id=WP_011166479.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	46117	46350	.	+	.	ID=gene-TS60_RS07265;Name=TS60_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07265;old_locus_tag=TS60_0324
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	46117	46350	.	+	0	ID=cds-WP_011166481.1;Parent=gene-TS60_RS07265;Dbxref=GenBank:WP_011166481.1;Name=WP_011166481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07265;product=hypothetical protein;protein_id=WP_011166481.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	46361	48647	.	+	.	ID=gene-TS60_RS07780;Name=TS60_RS07780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07780;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	46361	48647	.	+	0	ID=cds-TS60_RS07780;Parent=gene-TS60_RS07780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584458.1;locus_tag=TS60_RS07780;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	48803	50944	.	+	.	ID=gene-TS60_RS01540;Name=TS60_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01540;old_locus_tag=TS60_0328
NZ_LAEX01000003.1	Protein Homology	CDS	48803	50944	.	+	0	ID=cds-WP_080739931.1;Parent=gene-TS60_RS01540;Dbxref=GenBank:WP_080739931.1;Name=WP_080739931.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862605.1;locus_tag=TS60_RS01540;product=PTS sugar transporter subunit IIC;protein_id=WP_080739931.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	50971	53877	.	-	.	ID=gene-TS60_RS01545;Name=TS60_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01545;old_locus_tag=TS60_0329
NZ_LAEX01000003.1	Protein Homology	CDS	50971	53877	.	-	0	ID=cds-WP_015545596.1;Parent=gene-TS60_RS01545;Dbxref=GenBank:WP_015545596.1;Name=WP_015545596.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166486.1;locus_tag=TS60_RS01545;product=cation-translocating P-type ATPase;protein_id=WP_015545596.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	53886	54476	.	-	.	ID=gene-TS60_RS01550;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=TS60_RS01550;old_locus_tag=TS60_0330
NZ_LAEX01000003.1	Protein Homology	CDS	53886	54476	.	-	0	ID=cds-WP_011166487.1;Parent=gene-TS60_RS01550;Dbxref=GenBank:WP_011166487.1;Name=WP_011166487.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269253.1;locus_tag=TS60_RS01550;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_011166487.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	54470	55030	.	-	.	ID=gene-TS60_RS01555;Name=TS60_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01555;old_locus_tag=TS60_0331
NZ_LAEX01000003.1	Protein Homology	CDS	54470	55030	.	-	0	ID=cds-WP_011166488.1;Parent=gene-TS60_RS01555;Dbxref=GenBank:WP_011166488.1;Name=WP_011166488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729398.1;locus_tag=TS60_RS01555;product=hypothetical protein;protein_id=WP_011166488.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	55032	55610	.	-	.	ID=gene-TS60_RS01560;Name=TS60_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01560;old_locus_tag=TS60_0332
NZ_LAEX01000003.1	Protein Homology	CDS	55032	55610	.	-	0	ID=cds-WP_011166489.1;Parent=gene-TS60_RS01560;Dbxref=GenBank:WP_011166489.1;Name=WP_011166489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447607.1;locus_tag=TS60_RS01560;product=hypothetical protein;protein_id=WP_011166489.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	55613	56302	.	-	.	ID=gene-TS60_RS01565;Name=TS60_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01565;old_locus_tag=TS60_0333
NZ_LAEX01000003.1	Protein Homology	CDS	55613	56302	.	-	0	ID=cds-WP_011166490.1;Parent=gene-TS60_RS01565;Dbxref=GenBank:WP_011166490.1;Name=WP_011166490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269255.1;locus_tag=TS60_RS01565;product=hypothetical protein;protein_id=WP_011166490.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	56384	57076	.	+	.	ID=gene-TS60_RS01570;Name=TS60_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01570;old_locus_tag=TS60_0334
NZ_LAEX01000003.1	Protein Homology	CDS	56384	57076	.	+	0	ID=cds-WP_011166491.1;Parent=gene-TS60_RS01570;Dbxref=GenBank:WP_011166491.1;Name=WP_011166491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862610.1;locus_tag=TS60_RS01570;product=hypothetical protein;protein_id=WP_011166491.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	57077	57799	.	-	.	ID=gene-TS60_RS01575;Name=TS60_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01575;old_locus_tag=TS60_0335
NZ_LAEX01000003.1	Protein Homology	CDS	57077	57799	.	-	0	ID=cds-WP_011166492.1;Parent=gene-TS60_RS01575;Dbxref=GenBank:WP_011166492.1;Name=WP_011166492.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364438.1;locus_tag=TS60_RS01575;product=SDR family oxidoreductase;protein_id=WP_011166492.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	57842	58315	.	-	.	ID=gene-TS60_RS01580;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=TS60_RS01580;old_locus_tag=TS60_0336
NZ_LAEX01000003.1	Protein Homology	CDS	57842	58315	.	-	0	ID=cds-WP_011166493.1;Parent=gene-TS60_RS01580;Dbxref=GenBank:WP_011166493.1;Name=WP_011166493.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697950.1;locus_tag=TS60_RS01580;product=transcription elongation factor GreA;protein_id=WP_011166493.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	58438	60192	.	-	.	ID=gene-TS60_RS01585;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=TS60_RS01585;old_locus_tag=TS60_0337
NZ_LAEX01000003.1	Protein Homology	CDS	58438	60192	.	-	0	ID=cds-WP_011166494.1;Parent=gene-TS60_RS01585;Dbxref=GenBank:WP_011166494.1;Name=WP_011166494.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166494.1;locus_tag=TS60_RS01585;product=excinuclease ABC subunit UvrC;protein_id=WP_011166494.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	60202	61263	.	-	.	ID=gene-TS60_RS01590;Name=TS60_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01590;old_locus_tag=TS60_0338
NZ_LAEX01000003.1	Protein Homology	CDS	60202	61263	.	-	0	ID=cds-WP_011166495.1;Parent=gene-TS60_RS01590;Dbxref=GenBank:WP_011166495.1;Name=WP_011166495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862613.1;locus_tag=TS60_RS01590;product=membrane protein;protein_id=WP_011166495.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	61328	62932	.	-	.	ID=gene-TS60_RS01595;Name=TS60_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01595;old_locus_tag=TS60_0339
NZ_LAEX01000003.1	Protein Homology	CDS	61328	62932	.	-	0	ID=cds-WP_230592173.1;Parent=gene-TS60_RS01595;Dbxref=GenBank:WP_230592173.1;Name=WP_230592173.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166496.1;locus_tag=TS60_RS01595;product=APC family permease;protein_id=WP_230592173.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	63055	64807	.	-	.	ID=gene-TS60_RS01600;Name=TS60_RS01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01600;old_locus_tag=TS60_0340;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	63055	64807	.	-	0	ID=cds-TS60_RS01600;Parent=gene-TS60_RS01600;Note=frameshifted;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697946.1;locus_tag=TS60_RS01600;product=ribonuclease J;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	64933	65652	.	-	.	ID=gene-TS60_RS01605;Name=TS60_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01605;old_locus_tag=TS60_0342
NZ_LAEX01000003.1	Protein Homology	CDS	64933	65652	.	-	0	ID=cds-WP_011166498.1;Parent=gene-TS60_RS01605;Dbxref=GenBank:WP_011166498.1;Name=WP_011166498.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387143.1;locus_tag=TS60_RS01605;product=SDR family oxidoreductase;protein_id=WP_011166498.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	65664	66461	.	-	.	ID=gene-TS60_RS01610;Name=TS60_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01610;old_locus_tag=TS60_0343
NZ_LAEX01000003.1	Protein Homology	CDS	65664	66461	.	-	0	ID=cds-WP_015545431.1;Parent=gene-TS60_RS01610;Dbxref=GenBank:WP_015545431.1;Name=WP_015545431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862616.1;locus_tag=TS60_RS01610;product=diacylglycerol kinase catalytic domain-containing protein;protein_id=WP_015545431.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	66572	69190	.	-	.	ID=gene-TS60_RS01615;Name=TS60_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01615;old_locus_tag=TS60_0344
NZ_LAEX01000003.1	Protein Homology	CDS	66572	69190	.	-	0	ID=cds-WP_011166500.1;Parent=gene-TS60_RS01615;Dbxref=GenBank:WP_011166500.1;Name=WP_011166500.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166500.1;locus_tag=TS60_RS01615;product=valine--tRNA ligase;protein_id=WP_011166500.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	69277	69903	.	-	.	ID=gene-TS60_RS01620;Name=TS60_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01620;old_locus_tag=TS60_0345
NZ_LAEX01000003.1	Protein Homology	CDS	69277	69903	.	-	0	ID=cds-WP_015545668.1;Parent=gene-TS60_RS01620;Dbxref=GenBank:WP_015545668.1;Name=WP_015545668.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862618.1;locus_tag=TS60_RS01620;product=thiamine diphosphokinase;protein_id=WP_015545668.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	69893	70570	.	-	.	ID=gene-TS60_RS01625;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=TS60_RS01625;old_locus_tag=TS60_0346
NZ_LAEX01000003.1	Protein Homology	CDS	69893	70570	.	-	0	ID=cds-WP_011166502.1;Parent=gene-TS60_RS01625;Dbxref=GenBank:WP_011166502.1;Name=WP_011166502.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862619.1;locus_tag=TS60_RS01625;product=ribulose-phosphate 3-epimerase;protein_id=WP_011166502.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	70572	71474	.	-	.	ID=gene-TS60_RS01630;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=TS60_RS01630;old_locus_tag=TS60_0347
NZ_LAEX01000003.1	Protein Homology	CDS	70572	71474	.	-	0	ID=cds-WP_045596469.1;Parent=gene-TS60_RS01630;Dbxref=GenBank:WP_045596469.1;Name=WP_045596469.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166503.1;locus_tag=TS60_RS01630;product=ribosome small subunit-dependent GTPase A;protein_id=WP_045596469.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	71484	72599	.	-	.	ID=gene-TS60_RS01635;Name=TS60_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01635;old_locus_tag=TS60_0348
NZ_LAEX01000003.1	Protein Homology	CDS	71484	72599	.	-	0	ID=cds-WP_045596472.1;Parent=gene-TS60_RS01635;Dbxref=GenBank:WP_045596472.1;Name=WP_045596472.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863089.1;locus_tag=TS60_RS01635;product=serine/threonine-protein kinase;protein_id=WP_045596472.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	72599	73343	.	-	.	ID=gene-TS60_RS07785;Name=TS60_RS07785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07785;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	72599	73343	.	-	0	ID=cds-TS60_RS07785;Parent=gene-TS60_RS07785;Note=frameshifted;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729381.1;locus_tag=TS60_RS07785;product=PP2C family protein-serine/threonine phosphatase;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	73557	73742	.	-	.	ID=gene-TS60_RS07920;Name=TS60_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07920;old_locus_tag=TS60_0351
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	73557	73742	.	-	0	ID=cds-WP_011166506.1;Parent=gene-TS60_RS07920;Dbxref=GenBank:WP_011166506.1;Name=WP_011166506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07920;product=hypothetical protein;protein_id=WP_011166506.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	74016	74780	.	-	.	ID=gene-TS60_RS07925;Name=TS60_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07925;old_locus_tag=TS60_0352
NZ_LAEX01000003.1	Protein Homology	CDS	74016	74780	.	-	0	ID=cds-WP_015545259.1;Parent=gene-TS60_RS07925;Dbxref=GenBank:WP_015545259.1;Name=WP_015545259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545259.1;locus_tag=TS60_RS07925;product=hypothetical protein;protein_id=WP_015545259.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	74900	75316	.	+	.	ID=gene-TS60_RS01655;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=TS60_RS01655;old_locus_tag=TS60_0353
NZ_LAEX01000003.1	Protein Homology	CDS	74900	75316	.	+	0	ID=cds-WP_015545512.1;Parent=gene-TS60_RS01655;Dbxref=GenBank:WP_015545512.1;Name=WP_015545512.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364458.1;locus_tag=TS60_RS01655;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_015545512.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	75318	75881	.	+	.	ID=gene-TS60_RS01660;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=TS60_RS01660;old_locus_tag=TS60_0354
NZ_LAEX01000003.1	Protein Homology	CDS	75318	75881	.	+	0	ID=cds-WP_011166509.1;Parent=gene-TS60_RS01660;Dbxref=GenBank:WP_011166509.1;Name=WP_011166509.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862623.1;locus_tag=TS60_RS01660;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_011166509.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	75916	81222	.	-	.	ID=gene-TS60_RS06975;Name=TS60_RS06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06975;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	75916	81222	.	-	0	ID=cds-TS60_RS06975;Parent=gene-TS60_RS06975;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862624.1;locus_tag=TS60_RS06975;product=FtsX-like permease family protein;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	81435	84575	.	+	.	ID=gene-TS60_RS01670;Name=TS60_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01670;old_locus_tag=TS60_0358
NZ_LAEX01000003.1	Protein Homology	CDS	81435	84575	.	+	0	ID=cds-WP_011166513.1;Parent=gene-TS60_RS01670;Dbxref=GenBank:WP_011166513.1;Name=WP_011166513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862625.1;locus_tag=TS60_RS01670;product=STREFT protein;protein_id=WP_011166513.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	84590	84859	.	+	.	ID=gene-TS60_RS07295;Name=TS60_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07295;old_locus_tag=TS60_0359
NZ_LAEX01000003.1	Protein Homology	CDS	84590	84859	.	+	0	ID=cds-WP_011166514.1;Parent=gene-TS60_RS07295;Dbxref=GenBank:WP_011166514.1;Name=WP_011166514.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166514.1;locus_tag=TS60_RS07295;product=lipoprotein;protein_id=WP_011166514.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	84874	85236	.	+	.	ID=gene-TS60_RS07300;Name=TS60_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07300;old_locus_tag=TS60_0360
NZ_LAEX01000003.1	Protein Homology	CDS	84874	85236	.	+	0	ID=cds-WP_011166515.1;Parent=gene-TS60_RS07300;Dbxref=GenBank:WP_011166515.1;Name=WP_011166515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166515.1;locus_tag=TS60_RS07300;product=hypothetical protein;protein_id=WP_011166515.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	85354	87027	.	+	.	ID=gene-TS60_RS01685;Name=TS60_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01685;old_locus_tag=TS60_0361
NZ_LAEX01000003.1	Protein Homology	CDS	85354	87027	.	+	0	ID=cds-WP_015545370.1;Parent=gene-TS60_RS01685;Dbxref=GenBank:WP_015545370.1;Name=WP_015545370.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01685;product=IS1634-like element IS1634 family transposase;protein_id=WP_015545370.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	87116	87232	.	+	.	ID=gene-TS60_RS06435;Name=TS60_RS06435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06435;partial=true;pseudo=true;start_range=.,87116
NZ_LAEX01000003.1	Protein Homology	CDS	87116	87232	.	+	0	ID=cds-TS60_RS06435;Parent=gene-TS60_RS06435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06435;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,87116;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	87408	87536	.	-	.	ID=gene-TS60_RS07685;Name=TS60_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07685;old_locus_tag=TS60_0362
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	87408	87536	.	-	0	ID=cds-WP_015545500.1;Parent=gene-TS60_RS07685;Dbxref=GenBank:WP_015545500.1;Name=WP_015545500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07685;product=hypothetical protein;protein_id=WP_015545500.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	88261	89130	.	-	.	ID=gene-TS60_RS01690;Name=TS60_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01690;old_locus_tag=TS60_0363
NZ_LAEX01000003.1	Protein Homology	CDS	88261	89130	.	-	0	ID=cds-WP_011166516.1;Parent=gene-TS60_RS01690;Dbxref=GenBank:WP_011166516.1;Name=WP_011166516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584523.1;locus_tag=TS60_RS01690;product=aromatic motif membrane protein;protein_id=WP_011166516.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	89120	89980	.	-	.	ID=gene-TS60_RS01695;Name=TS60_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01695;old_locus_tag=TS60_0364
NZ_LAEX01000003.1	Protein Homology	CDS	89120	89980	.	-	0	ID=cds-WP_011166517.1;Parent=gene-TS60_RS01695;Dbxref=GenBank:WP_011166517.1;Name=WP_011166517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166517.1;locus_tag=TS60_RS01695;product=aromatic motif membrane protein;protein_id=WP_011166517.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	89973	91100	.	-	.	ID=gene-TS60_RS01700;Name=TS60_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01700;old_locus_tag=TS60_0365
NZ_LAEX01000003.1	Protein Homology	CDS	89973	91100	.	-	0	ID=cds-WP_011166518.1;Parent=gene-TS60_RS01700;Dbxref=GenBank:WP_011166518.1;Name=WP_011166518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166518.1;locus_tag=TS60_RS01700;product=aromatic motif membrane protein;protein_id=WP_011166518.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	91078	91782	.	-	.	ID=gene-TS60_RS01705;Name=TS60_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01705;old_locus_tag=TS60_0366
NZ_LAEX01000003.1	Protein Homology	CDS	91078	91782	.	-	0	ID=cds-WP_011166519.1;Parent=gene-TS60_RS01705;Dbxref=GenBank:WP_011166519.1;Name=WP_011166519.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448035.1;locus_tag=TS60_RS01705;product=ABC transporter ATP-binding protein;protein_id=WP_011166519.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	91785	93617	.	-	.	ID=gene-TS60_RS01710;Name=TS60_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01710;old_locus_tag=TS60_0367
NZ_LAEX01000003.1	Protein Homology	CDS	91785	93617	.	-	0	ID=cds-WP_011166520.1;Parent=gene-TS60_RS01710;Dbxref=GenBank:WP_011166520.1;Name=WP_011166520.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166520.1;locus_tag=TS60_RS01710;product=ABC transporter permease;protein_id=WP_011166520.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	93972	94619	.	+	.	ID=gene-TS60_RS07795;Name=TS60_RS07795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07795;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	93972	94619	.	+	0	ID=cds-TS60_RS07795;Parent=gene-TS60_RS07795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448037.1;locus_tag=TS60_RS07795;product=deoxynucleoside kinase;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	94802	95002	.	+	.	ID=gene-TS60_RS01725;Name=TS60_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01725
NZ_LAEX01000003.1	GeneMarkS-2+	CDS	94802	95002	.	+	0	ID=cds-WP_015545573.1;Parent=gene-TS60_RS01725;Dbxref=GenBank:WP_015545573.1;Name=WP_015545573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS01725;product=hypothetical protein;protein_id=WP_015545573.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	95167	95256	.	+	.	ID=gene-TS60_RS01730;Name=TS60_RS01730;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS01730;old_locus_tag=TS60_0369
NZ_LAEX01000003.1	tRNAscan-SE	tRNA	95167	95256	.	+	.	ID=rna-TS60_RS01730;Parent=gene-TS60_RS01730;anticodon=(pos:95201..95203);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS01730;product=tRNA-Ser
NZ_LAEX01000003.1	tRNAscan-SE	exon	95167	95256	.	+	.	ID=exon-TS60_RS01730-1;Parent=rna-TS60_RS01730;anticodon=(pos:95201..95203);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS01730;product=tRNA-Ser
NZ_LAEX01000003.1	RefSeq	gene	95376	96056	.	+	.	ID=gene-TS60_RS01735;Name=TS60_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01735;old_locus_tag=TS60_0370
NZ_LAEX01000003.1	Protein Homology	CDS	95376	96056	.	+	0	ID=cds-WP_011166522.1;Parent=gene-TS60_RS01735;Dbxref=GenBank:WP_011166522.1;Name=WP_011166522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166522.1;locus_tag=TS60_RS01735;product=hypothetical protein;protein_id=WP_011166522.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	96037	97461	.	+	.	ID=gene-TS60_RS01740;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=TS60_RS01740;old_locus_tag=TS60_0371
NZ_LAEX01000003.1	Protein Homology	CDS	96037	97461	.	+	0	ID=cds-WP_015545294.1;Parent=gene-TS60_RS01740;Dbxref=GenBank:WP_015545294.1;Name=WP_015545294.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269328.1;locus_tag=TS60_RS01740;product=proline--tRNA ligase;protein_id=WP_015545294.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	97474	98091	.	+	.	ID=gene-TS60_RS01745;Name=TS60_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01745;old_locus_tag=TS60_0372
NZ_LAEX01000003.1	Protein Homology	CDS	97474	98091	.	+	0	ID=cds-WP_015545652.1;Parent=gene-TS60_RS01745;Dbxref=GenBank:WP_015545652.1;Name=WP_015545652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729451.1;locus_tag=TS60_RS01745;product=ribonuclease H1 domain-containing protein;protein_id=WP_015545652.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	98093	98980	.	+	.	ID=gene-TS60_RS01750;Name=TS60_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01750;old_locus_tag=TS60_0373
NZ_LAEX01000003.1	Protein Homology	CDS	98093	98980	.	+	0	ID=cds-WP_011166525.1;Parent=gene-TS60_RS01750;Dbxref=GenBank:WP_011166525.1;Name=WP_011166525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862633.1;locus_tag=TS60_RS01750;product=serine aminopeptidase domain-containing protein;protein_id=WP_011166525.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	99004	100806	.	+	.	ID=gene-TS60_RS01755;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=TS60_RS01755;old_locus_tag=TS60_0374
NZ_LAEX01000003.1	Protein Homology	CDS	99004	100806	.	+	0	ID=cds-WP_011166526.1;Parent=gene-TS60_RS01755;Dbxref=GenBank:WP_011166526.1;Name=WP_011166526.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364471.1;locus_tag=TS60_RS01755;product=translation elongation factor 4;protein_id=WP_011166526.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	100833	101690	.	+	.	ID=gene-TS60_RS01760;Name=TS60_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01760;old_locus_tag=TS60_0375
NZ_LAEX01000003.1	Protein Homology	CDS	100833	101690	.	+	0	ID=cds-WP_011166527.1;Parent=gene-TS60_RS01760;Dbxref=GenBank:WP_011166527.1;Name=WP_011166527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166527.1;locus_tag=TS60_RS01760;product=hypothetical protein;protein_id=WP_011166527.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	101760	103433	.	-	.	ID=gene-TS60_RS01765;Name=TS60_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01765;old_locus_tag=TS60_0376
NZ_LAEX01000003.1	Protein Homology	CDS	101760	103433	.	-	0	ID=cds-WP_011166528.1-2;Parent=gene-TS60_RS01765;Dbxref=GenBank:WP_011166528.1;Name=WP_011166528.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01765;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166528.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	103545	105269	.	-	.	ID=gene-TS60_RS01770;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=TS60_RS01770;old_locus_tag=TS60_0377
NZ_LAEX01000003.1	Protein Homology	CDS	103545	105269	.	-	0	ID=cds-WP_045596476.1;Parent=gene-TS60_RS01770;Dbxref=GenBank:WP_045596476.1;Name=WP_045596476.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862635.1;locus_tag=TS60_RS01770;product=aspartate--tRNA ligase;protein_id=WP_045596476.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	105278	106522	.	-	.	ID=gene-TS60_RS01775;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=TS60_RS01775;old_locus_tag=TS60_0378
NZ_LAEX01000003.1	Protein Homology	CDS	105278	106522	.	-	0	ID=cds-WP_011166530.1;Parent=gene-TS60_RS01775;Dbxref=GenBank:WP_011166530.1;Name=WP_011166530.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447644.1;locus_tag=TS60_RS01775;product=histidine--tRNA ligase;protein_id=WP_011166530.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	106707	107060	.	+	.	ID=gene-TS60_RS01780;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=TS60_RS01780;old_locus_tag=TS60_0379
NZ_LAEX01000003.1	Protein Homology	CDS	106707	107060	.	+	0	ID=cds-WP_011166531.1;Parent=gene-TS60_RS01780;Dbxref=GenBank:WP_011166531.1;Name=WP_011166531.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269335.1;locus_tag=TS60_RS01780;product=30S ribosome-binding factor RbfA;protein_id=WP_011166531.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	107110	107988	.	+	.	ID=gene-TS60_RS01785;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=TS60_RS01785;old_locus_tag=TS60_0380
NZ_LAEX01000003.1	Protein Homology	CDS	107110	107988	.	+	0	ID=cds-WP_011166532.1;Parent=gene-TS60_RS01785;Dbxref=GenBank:WP_011166532.1;Name=WP_011166532.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729458.1;locus_tag=TS60_RS01785;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_011166532.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	gene	107975	108529	.	+	.	ID=gene-TS60_RS01790;Name=TS60_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01790;old_locus_tag=TS60_0381
NZ_LAEX01000003.1	Protein Homology	CDS	107975	108529	.	+	0	ID=cds-WP_011166533.1;Parent=gene-TS60_RS01790;Dbxref=GenBank:WP_011166533.1;Name=WP_011166533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862639.1;locus_tag=TS60_RS01790;product=nucleotidyl transferase family protein;protein_id=WP_011166533.1;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	108552	108830	.	-	.	ID=gene-TS60_RS07930;Name=TS60_RS07930;end_range=108830,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07930;partial=true;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	108552	108830	.	-	0	ID=cds-TS60_RS07930;Parent=gene-TS60_RS07930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=108830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729460.1;locus_tag=TS60_RS07930;partial=true;product=S41 family peptidase;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	108880	109152	.	+	.	ID=gene-TS60_RS01800;Name=TS60_RS01800;end_range=109152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01800;old_locus_tag=TS60_0382;partial=true;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	108880	109152	.	+	0	ID=cds-TS60_RS01800;Parent=gene-TS60_RS01800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=109152,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS01800;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	109241	110918	.	-	.	ID=gene-TS60_RS01805;Name=TS60_RS01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01805;old_locus_tag=TS60_0384;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	109241	110918	.	-	0	ID=cds-TS60_RS01805;Parent=gene-TS60_RS01805;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01805;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	111028	112181	.	+	.	ID=gene-TS60_RS06450;Name=TS60_RS06450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06450;partial=true;pseudo=true;start_range=.,111028
NZ_LAEX01000003.1	Protein Homology	CDS	111028	112181	.	+	0	ID=cds-TS60_RS06450;Parent=gene-TS60_RS06450;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06450;partial=true;product=IS3-like element IS1296 family transposase;pseudo=true;start_range=.,111028;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	112119	112700	.	-	.	ID=gene-TS60_RS01820;Name=TS60_RS01820;end_range=112700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01820;old_locus_tag=TS60_0387;partial=true;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	112119	112700	.	-	0	ID=cds-TS60_RS01820;Parent=gene-TS60_RS01820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=112700,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447648.1;locus_tag=TS60_RS01820;partial=true;product=S41 family peptidase;pseudo=true;transl_table=4
NZ_LAEX01000003.1	RefSeq	pseudogene	112811	113854	.	+	.	ID=gene-TS60_RS01825;Name=TS60_RS01825;end_range=113854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS01825;old_locus_tag=TS60_0388;partial=true;pseudo=true
NZ_LAEX01000003.1	Protein Homology	CDS	112811	113854	.	+	0	ID=cds-TS60_RS01825;Parent=gene-TS60_RS01825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=113854,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01825;partial=true;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
##sequence-region NZ_LAEX01000004.1 1 41567
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000004.1	RefSeq	region	1	41567	.	+	.	ID=NZ_LAEX01000004.1:1..41567;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000004.1	RefSeq	pseudogene	1	561	.	+	.	ID=gene-TS60_RS07995;Name=TS60_RS07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07995;old_locus_tag=TS60_0389;partial=true;pseudo=true;start_range=.,1
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	1	561	.	+	0	ID=cds-TS60_RS07995;Parent=gene-TS60_RS07995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07995;partial=true;product=IS1634 family transposase;pseudo=true;start_range=.,1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	467	1561	.	+	.	ID=gene-TS60_RS01835;Name=TS60_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01835;old_locus_tag=TS60_0390
NZ_LAEX01000004.1	Protein Homology	CDS	467	1561	.	+	0	ID=cds-WP_457602201.1;Parent=gene-TS60_RS01835;Dbxref=GenBank:WP_457602201.1;Name=WP_457602201.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033559.2;locus_tag=TS60_RS01835;product=IS1634 family transposase;protein_id=WP_457602201.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	pseudogene	1627	2963	.	-	.	ID=gene-TS60_RS07935;Name=TS60_RS07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07935;partial=true;pseudo=true;start_range=.,1627
NZ_LAEX01000004.1	Protein Homology	CDS	1627	2963	.	-	0	ID=cds-TS60_RS07935;Parent=gene-TS60_RS07935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729460.1;locus_tag=TS60_RS07935;partial=true;product=S41 family peptidase;pseudo=true;start_range=.,1627;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	2988	4766	.	-	.	ID=gene-TS60_RS06985;Name=TS60_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06985;old_locus_tag=TS60_0393
NZ_LAEX01000004.1	Protein Homology	CDS	2988	4766	.	-	0	ID=cds-WP_045596496.1;Parent=gene-TS60_RS06985;Dbxref=GenBank:WP_045596496.1;Name=WP_045596496.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545362.1;locus_tag=TS60_RS06985;product=S41 family peptidase;protein_id=WP_045596496.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	4979	5245	.	+	.	ID=gene-TS60_RS01855;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=TS60_RS01855;old_locus_tag=TS60_0394
NZ_LAEX01000004.1	Protein Homology	CDS	4979	5245	.	+	0	ID=cds-WP_011166540.1;Parent=gene-TS60_RS01855;Dbxref=GenBank:WP_011166540.1;Name=WP_011166540.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166540.1;locus_tag=TS60_RS01855;product=30S ribosomal protein S15;protein_id=WP_011166540.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	5305	5378	.	+	.	ID=gene-TS60_RS01860;Name=TS60_RS01860;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS01860;old_locus_tag=TS60_0395
NZ_LAEX01000004.1	tRNAscan-SE	tRNA	5305	5378	.	+	.	ID=rna-TS60_RS01860;Parent=gene-TS60_RS01860;anticodon=(pos:5337..5339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS01860;product=tRNA-Gly
NZ_LAEX01000004.1	tRNAscan-SE	exon	5305	5378	.	+	.	ID=exon-TS60_RS01860-1;Parent=rna-TS60_RS01860;anticodon=(pos:5337..5339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS01860;product=tRNA-Gly
NZ_LAEX01000004.1	RefSeq	gene	5477	6121	.	+	.	ID=gene-TS60_RS01865;Name=TS60_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01865;old_locus_tag=TS60_0396
NZ_LAEX01000004.1	Protein Homology	CDS	5477	6121	.	+	0	ID=cds-WP_011166541.1;Parent=gene-TS60_RS01865;Dbxref=GenBank:WP_011166541.1;Name=WP_011166541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697919.1;locus_tag=TS60_RS01865;product=DxFTY motif-containing membrane protein;protein_id=WP_011166541.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	6140	8002	.	-	.	ID=gene-TS60_RS01870;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=TS60_RS01870;old_locus_tag=TS60_0397
NZ_LAEX01000004.1	Protein Homology	CDS	6140	8002	.	-	0	ID=cds-WP_011166542.1;Parent=gene-TS60_RS01870;Dbxref=GenBank:WP_011166542.1;Name=WP_011166542.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862643.1;locus_tag=TS60_RS01870;product=translation initiation factor IF-2;protein_id=WP_011166542.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	8024	8323	.	-	.	ID=gene-TS60_RS01875;Name=TS60_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01875;old_locus_tag=TS60_0398
NZ_LAEX01000004.1	Protein Homology	CDS	8024	8323	.	-	0	ID=cds-WP_011166543.1;Parent=gene-TS60_RS01875;Dbxref=GenBank:WP_011166543.1;Name=WP_011166543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364486.1;locus_tag=TS60_RS01875;product=L7Ae/L30e/S12e/Gadd45 family ribosomal protein;protein_id=WP_011166543.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	8310	8597	.	-	.	ID=gene-TS60_RS01880;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=TS60_RS01880;old_locus_tag=TS60_0399
NZ_LAEX01000004.1	Protein Homology	CDS	8310	8597	.	-	0	ID=cds-WP_011166544.1;Parent=gene-TS60_RS01880;Dbxref=GenBank:WP_011166544.1;Name=WP_011166544.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166544.1;locus_tag=TS60_RS01880;product=RNase P modulator RnpM;protein_id=WP_011166544.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	8572	10326	.	-	.	ID=gene-TS60_RS01885;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=TS60_RS01885;old_locus_tag=TS60_0400
NZ_LAEX01000004.1	Protein Homology	CDS	8572	10326	.	-	0	ID=cds-WP_039275603.1;Parent=gene-TS60_RS01885;Dbxref=GenBank:WP_039275603.1;Name=WP_039275603.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545475.1;locus_tag=TS60_RS01885;product=transcription termination factor NusA;protein_id=WP_039275603.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	10335	10829	.	-	.	ID=gene-TS60_RS01890;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=TS60_RS01890;old_locus_tag=TS60_0401
NZ_LAEX01000004.1	Protein Homology	CDS	10335	10829	.	-	0	ID=cds-WP_011166546.1;Parent=gene-TS60_RS01890;Dbxref=GenBank:WP_011166546.1;Name=WP_011166546.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862646.1;locus_tag=TS60_RS01890;product=ribosome maturation factor RimP;protein_id=WP_011166546.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	10943	11593	.	-	.	ID=gene-TS60_RS01895;Name=TS60_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01895;old_locus_tag=TS60_0402
NZ_LAEX01000004.1	Protein Homology	CDS	10943	11593	.	-	0	ID=cds-WP_011166547.1;Parent=gene-TS60_RS01895;Dbxref=GenBank:WP_011166547.1;Name=WP_011166547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729468.1;locus_tag=TS60_RS01895;product=nitroreductase family protein;protein_id=WP_011166547.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	11606	16054	.	-	.	ID=gene-TS60_RS01900;Name=TS60_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01900;old_locus_tag=TS60_0403
NZ_LAEX01000004.1	Protein Homology	CDS	11606	16054	.	-	0	ID=cds-WP_011166548.1;Parent=gene-TS60_RS01900;Dbxref=GenBank:WP_011166548.1;Name=WP_011166548.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862648.1;locus_tag=TS60_RS01900;product=PolC-type DNA polymerase III;protein_id=WP_011166548.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	16063	17088	.	-	.	ID=gene-TS60_RS01905;Name=TS60_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01905;old_locus_tag=TS60_0404
NZ_LAEX01000004.1	Protein Homology	CDS	16063	17088	.	-	0	ID=cds-WP_011166549.1;Parent=gene-TS60_RS01905;Dbxref=GenBank:WP_011166549.1;Name=WP_011166549.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729470.1;locus_tag=TS60_RS01905;product=phosphatidate cytidylyltransferase;protein_id=WP_011166549.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	17288	18364	.	-	.	ID=gene-TS60_RS01910;Name=TS60_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01910;old_locus_tag=TS60_0405
NZ_LAEX01000004.1	Protein Homology	CDS	17288	18364	.	-	0	ID=cds-WP_015545634.1;Parent=gene-TS60_RS01910;Dbxref=GenBank:WP_015545634.1;Name=WP_015545634.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545634.1;locus_tag=TS60_RS01910;product=M24 family metallopeptidase;protein_id=WP_015545634.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	18509	19519	.	+	.	ID=gene-TS60_RS01915;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=TS60_RS01915;old_locus_tag=TS60_0406
NZ_LAEX01000004.1	Protein Homology	CDS	18509	19519	.	+	0	ID=cds-WP_011166551.1;Parent=gene-TS60_RS01915;Dbxref=GenBank:WP_011166551.1;Name=WP_011166551.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862651.1;locus_tag=TS60_RS01915;product=tryptophan--tRNA ligase;protein_id=WP_011166551.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	19548	20417	.	-	.	ID=gene-TS60_RS01920;Name=TS60_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01920;old_locus_tag=TS60_0407
NZ_LAEX01000004.1	Protein Homology	CDS	19548	20417	.	-	0	ID=cds-WP_015545599.1;Parent=gene-TS60_RS01920;Dbxref=GenBank:WP_015545599.1;Name=WP_015545599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862652.1;locus_tag=TS60_RS01920;product=hypothetical protein;protein_id=WP_015545599.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	20530	21162	.	+	.	ID=gene-TS60_RS01925;Name=TS60_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01925;old_locus_tag=TS60_0408
NZ_LAEX01000004.1	Protein Homology	CDS	20530	21162	.	+	0	ID=cds-WP_011166553.1;Parent=gene-TS60_RS01925;Dbxref=GenBank:WP_011166553.1;Name=WP_011166553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166553.1;locus_tag=TS60_RS01925;product=hypothetical protein;protein_id=WP_011166553.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	21392	22462	.	-	.	ID=gene-TS60_RS01930;Name=TS60_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01930;old_locus_tag=TS60_0409
NZ_LAEX01000004.1	Protein Homology	CDS	21392	22462	.	-	0	ID=cds-WP_011166554.1;Parent=gene-TS60_RS01930;Dbxref=GenBank:WP_011166554.1;Name=WP_011166554.1;Ontology_term=GO:0006310;gbkey=CDS;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166554.1;locus_tag=TS60_RS01930;product=DNA recombination protein RmuC;protein_id=WP_011166554.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	22951	23337	.	+	.	ID=gene-TS60_RS06990;Name=TS60_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06990;old_locus_tag=TS60_0410
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	22951	23337	.	+	0	ID=cds-WP_236252316.1;Parent=gene-TS60_RS06990;Dbxref=GenBank:WP_236252316.1;Name=WP_236252316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS06990;product=hypothetical protein;protein_id=WP_236252316.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	23312	23461	.	+	.	ID=gene-TS60_RS07315;Name=TS60_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07315;old_locus_tag=TS60_0411
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	23312	23461	.	+	0	ID=cds-WP_236252317.1;Parent=gene-TS60_RS07315;Dbxref=GenBank:WP_236252317.1;Name=WP_236252317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07315;product=hypothetical protein;protein_id=WP_236252317.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	23502	25175	.	-	.	ID=gene-TS60_RS01940;Name=TS60_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01940;old_locus_tag=TS60_0412
NZ_LAEX01000004.1	Protein Homology	CDS	23502	25175	.	-	0	ID=cds-WP_011166271.1;Parent=gene-TS60_RS01940;Dbxref=GenBank:WP_011166271.1;Name=WP_011166271.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS01940;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166271.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	25255	25464	.	+	.	ID=gene-TS60_RS07320;Name=TS60_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07320;old_locus_tag=TS60_0413
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	25255	25464	.	+	0	ID=cds-WP_227716908.1;Parent=gene-TS60_RS07320;Dbxref=GenBank:WP_227716908.1;Name=WP_227716908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07320;product=hypothetical protein;protein_id=WP_227716908.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	26515	26985	.	-	.	ID=gene-TS60_RS01945;Name=TS60_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01945;old_locus_tag=TS60_0414
NZ_LAEX01000004.1	Protein Homology	CDS	26515	26985	.	-	0	ID=cds-WP_011166557.1;Parent=gene-TS60_RS01945;Dbxref=GenBank:WP_011166557.1;Name=WP_011166557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166557.1;locus_tag=TS60_RS01945;product=variable surface lipoprotein;protein_id=WP_011166557.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	pseudogene	27171	28582	.	-	.	ID=gene-TS60_RS06470;Name=TS60_RS06470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06470;pseudo=true
NZ_LAEX01000004.1	Protein Homology	CDS	27171	28582	.	-	0	ID=cds-TS60_RS06470;Parent=gene-TS60_RS06470;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06470;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	29014	29319	.	-	.	ID=gene-TS60_RS06475;Name=TS60_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06475;old_locus_tag=TS60_0417
NZ_LAEX01000004.1	Protein Homology	CDS	29014	29319	.	-	0	ID=cds-WP_011166558.1;Parent=gene-TS60_RS06475;Dbxref=GenBank:WP_011166558.1;Name=WP_011166558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166558.1;locus_tag=TS60_RS06475;product=hypothetical protein;protein_id=WP_011166558.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	29417	30202	.	-	.	ID=gene-TS60_RS01965;Name=TS60_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01965;old_locus_tag=TS60_0418
NZ_LAEX01000004.1	Protein Homology	CDS	29417	30202	.	-	0	ID=cds-WP_011166559.1;Parent=gene-TS60_RS01965;Dbxref=GenBank:WP_011166559.1;Name=WP_011166559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862662.1;locus_tag=TS60_RS01965;product=alpha/beta fold hydrolase;protein_id=WP_011166559.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	30211	30357	.	-	.	ID=gene-TS60_RS05835;Name=TS60_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05835;old_locus_tag=TS60_0419
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	30211	30357	.	-	0	ID=cds-WP_011166560.1;Parent=gene-TS60_RS05835;Dbxref=GenBank:WP_011166560.1;Name=WP_011166560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS05835;product=hypothetical protein;protein_id=WP_011166560.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	30433	31977	.	-	.	ID=gene-TS60_RS01970;Name=TS60_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01970;old_locus_tag=TS60_0420
NZ_LAEX01000004.1	Protein Homology	CDS	30433	31977	.	-	0	ID=cds-WP_011166561.1;Parent=gene-TS60_RS01970;Dbxref=GenBank:WP_011166561.1;Name=WP_011166561.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862660.1;locus_tag=TS60_RS01970;product=SNF2-related protein;protein_id=WP_011166561.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	32044	32289	.	-	.	ID=gene-TS60_RS01975;Name=TS60_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01975;old_locus_tag=TS60_0421
NZ_LAEX01000004.1	Protein Homology	CDS	32044	32289	.	-	0	ID=cds-WP_011166562.1;Parent=gene-TS60_RS01975;Dbxref=GenBank:WP_011166562.1;Name=WP_011166562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862659.1;locus_tag=TS60_RS01975;product=YneF family protein;protein_id=WP_011166562.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	32305	34275	.	-	.	ID=gene-TS60_RS01980;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=TS60_RS01980;old_locus_tag=TS60_0422
NZ_LAEX01000004.1	Protein Homology	CDS	32305	34275	.	-	0	ID=cds-WP_039275610.1;Parent=gene-TS60_RS01980;Dbxref=GenBank:WP_039275610.1;Name=WP_039275610.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862658.1;locus_tag=TS60_RS01980;product=transketolase;protein_id=WP_039275610.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	34334	34486	.	-	.	ID=gene-TS60_RS01985;Name=TS60_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01985;old_locus_tag=TS60_0423
NZ_LAEX01000004.1	Protein Homology	CDS	34334	34486	.	-	0	ID=cds-WP_011166564.1;Parent=gene-TS60_RS01985;Dbxref=GenBank:WP_011166564.1;Name=WP_011166564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166564.1;locus_tag=TS60_RS01985;product=hypothetical protein;protein_id=WP_011166564.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	34608	35342	.	-	.	ID=gene-TS60_RS01990;Name=TS60_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS01990;old_locus_tag=TS60_0424
NZ_LAEX01000004.1	Protein Homology	CDS	34608	35342	.	-	0	ID=cds-WP_011166565.1;Parent=gene-TS60_RS01990;Dbxref=GenBank:WP_011166565.1;Name=WP_011166565.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729479.1;locus_tag=TS60_RS01990;product=folate family ECF transporter S component;protein_id=WP_011166565.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	35447	36721	.	-	.	ID=gene-TS60_RS01995;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=TS60_RS01995;old_locus_tag=TS60_0425
NZ_LAEX01000004.1	Protein Homology	CDS	35447	36721	.	-	0	ID=cds-WP_011166566.1;Parent=gene-TS60_RS01995;Dbxref=GenBank:WP_011166566.1;Name=WP_011166566.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697905.1;locus_tag=TS60_RS01995;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_011166566.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	36997	37305	.	-	.	ID=gene-TS60_RS07325;Name=TS60_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07325;old_locus_tag=TS60_0426
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	36997	37305	.	-	0	ID=cds-WP_011166567.1;Parent=gene-TS60_RS07325;Dbxref=GenBank:WP_011166567.1;Name=WP_011166567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07325;product=hypothetical protein;protein_id=WP_011166567.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	37594	38013	.	+	.	ID=gene-TS60_RS02005;Name=TS60_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02005;old_locus_tag=TS60_0427
NZ_LAEX01000004.1	Protein Homology	CDS	37594	38013	.	+	0	ID=cds-WP_015545666.1;Parent=gene-TS60_RS02005;Dbxref=GenBank:WP_015545666.1;Name=WP_015545666.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166568.1;locus_tag=TS60_RS02005;product=lipoprotein;protein_id=WP_015545666.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	pseudogene	38359	38589	.	+	.	ID=gene-TS60_RS07330;Name=TS60_RS07330;end_range=38589,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07330;partial=true;pseudo=true
NZ_LAEX01000004.1	Protein Homology	CDS	38359	38589	.	+	0	ID=cds-TS60_RS07330;Parent=gene-TS60_RS07330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676;end_range=38589,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF016232.6;locus_tag=TS60_RS07330;partial=true;product=AlbA family DNA-binding domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	38623	39048	.	+	.	ID=gene-TS60_RS07335;Name=TS60_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07335;old_locus_tag=TS60_0428
NZ_LAEX01000004.1	GeneMarkS-2+	CDS	38623	39048	.	+	0	ID=cds-WP_052672459.1;Parent=gene-TS60_RS07335;Dbxref=GenBank:WP_052672459.1;Name=WP_052672459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07335;product=hypothetical protein;protein_id=WP_052672459.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	39110	39394	.	+	.	ID=gene-TS60_RS07340;Name=TS60_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07340
NZ_LAEX01000004.1	Protein Homology	CDS	39110	39394	.	+	0	ID=cds-WP_045596502.1;Parent=gene-TS60_RS07340;Dbxref=GenBank:WP_045596502.1;Name=WP_045596502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025124.6;locus_tag=TS60_RS07340;product=ATP-binding protein;protein_id=WP_045596502.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	gene	39309	39731	.	+	.	ID=gene-TS60_RS07345;Name=TS60_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07345;old_locus_tag=TS60_0429
NZ_LAEX01000004.1	Protein Homology	CDS	39309	39731	.	+	0	ID=cds-WP_011166570.1;Parent=gene-TS60_RS07345;Dbxref=GenBank:WP_011166570.1;Name=WP_011166570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166570.1;locus_tag=TS60_RS07345;product=hypothetical protein;protein_id=WP_011166570.1;transl_table=4
NZ_LAEX01000004.1	RefSeq	pseudogene	39832	40395	.	-	.	ID=gene-TS60_RS02025;Name=TS60_RS02025;end_range=40395,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02025;old_locus_tag=TS60_0430;partial=true;pseudo=true
NZ_LAEX01000004.1	Protein Homology	CDS	39832	40395	.	-	0	ID=cds-TS60_RS02025;Parent=gene-TS60_RS02025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=40395,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02025;partial=true;product=IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000004.1	RefSeq	pseudogene	40505	41567	.	+	.	ID=gene-TS60_RS02030;Name=TS60_RS02030;end_range=41567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02030;old_locus_tag=TS60_0431;partial=true;pseudo=true
NZ_LAEX01000004.1	Protein Homology	CDS	40505	41567	.	+	0	ID=cds-TS60_RS02030;Parent=gene-TS60_RS02030;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=41567,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02030;partial=true;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
##sequence-region NZ_LAEX01000005.1 1 34901
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000005.1	RefSeq	region	1	34901	.	+	.	ID=NZ_LAEX01000005.1:1..34901;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000005.1	RefSeq	gene	1	1125	.	-	.	ID=gene-TS60_RS02035;Name=TS60_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02035;old_locus_tag=TS60_0432;partial=true;start_range=.,1
NZ_LAEX01000005.1	Protein Homology	CDS	1	1125	.	-	0	ID=cds-WP_045596517.1;Parent=gene-TS60_RS02035;Dbxref=GenBank:WP_045596517.1;Name=WP_045596517.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02035;partial=true;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596517.1;start_range=.,1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	1317	1475	.	-	.	ID=gene-TS60_RS02040;Name=TS60_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02040;old_locus_tag=TS60_0433
NZ_LAEX01000005.1	Protein Homology	CDS	1317	1475	.	-	0	ID=cds-WP_011166571.1;Parent=gene-TS60_RS02040;Dbxref=GenBank:WP_011166571.1;Name=WP_011166571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166571.1;locus_tag=TS60_RS02040;product=hypothetical protein;protein_id=WP_011166571.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	2306	3808	.	+	.	ID=gene-TS60_RS02050;Name=TS60_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02050;old_locus_tag=TS60_0434
NZ_LAEX01000005.1	Protein Homology	CDS	2306	3808	.	+	0	ID=cds-WP_011166572.1;Parent=gene-TS60_RS02050;Dbxref=GenBank:WP_011166572.1;Name=WP_011166572.1;Ontology_term=GO:0055085,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729492.1;locus_tag=TS60_RS02050;product=MFS cation transporter;protein_id=WP_011166572.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	pseudogene	3826	4588	.	+	.	ID=gene-TS60_RS02055;Name=TS60_RS02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02055;old_locus_tag=TS60_0436;pseudo=true
NZ_LAEX01000005.1	Protein Homology	CDS	3826	4588	.	+	0	ID=cds-TS60_RS02055;Parent=gene-TS60_RS02055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729493.1;locus_tag=TS60_RS02055;product=hypothetical protein;pseudo=true;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	4598	5434	.	+	.	ID=gene-TS60_RS02060;Name=TS60_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02060;old_locus_tag=TS60_0437
NZ_LAEX01000005.1	Protein Homology	CDS	4598	5434	.	+	0	ID=cds-WP_045596524.1;Parent=gene-TS60_RS02060;Dbxref=GenBank:WP_045596524.1;Name=WP_045596524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447884.1;locus_tag=TS60_RS02060;product=segregation/condensation protein A;protein_id=WP_045596524.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	5418	6047	.	+	.	ID=gene-TS60_RS02065;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=TS60_RS02065;old_locus_tag=TS60_0438
NZ_LAEX01000005.1	Protein Homology	CDS	5418	6047	.	+	0	ID=cds-WP_011166575.1;Parent=gene-TS60_RS02065;Dbxref=GenBank:WP_011166575.1;Name=WP_011166575.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862668.1;locus_tag=TS60_RS02065;product=SMC-Scp complex subunit ScpB;protein_id=WP_011166575.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	pseudogene	6115	6874	.	+	.	ID=gene-TS60_RS07800;Name=TS60_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07800;pseudo=true
NZ_LAEX01000005.1	Protein Homology	CDS	6115	6874	.	+	0	ID=cds-TS60_RS07800;Parent=gene-TS60_RS07800;Note=frameshifted;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447882.1;locus_tag=TS60_RS07800;product=pseudouridine synthase;pseudo=true;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	6884	7501	.	+	.	ID=gene-TS60_RS02075;Name=TS60_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02075;old_locus_tag=TS60_0441
NZ_LAEX01000005.1	Protein Homology	CDS	6884	7501	.	+	0	ID=cds-WP_011166577.1;Parent=gene-TS60_RS02075;Dbxref=GenBank:WP_011166577.1;Name=WP_011166577.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447881.1;locus_tag=TS60_RS02075;product=deoxynucleoside kinase;protein_id=WP_011166577.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	7513	8226	.	+	.	ID=gene-TS60_RS02080;Name=TS60_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02080;old_locus_tag=TS60_0442
NZ_LAEX01000005.1	Protein Homology	CDS	7513	8226	.	+	0	ID=cds-WP_015545296.1;Parent=gene-TS60_RS02080;Dbxref=GenBank:WP_015545296.1;Name=WP_015545296.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862670.1;locus_tag=TS60_RS02080;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_015545296.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	8326	9153	.	+	.	ID=gene-TS60_RS02085;Name=TS60_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02085;old_locus_tag=TS60_0443
NZ_LAEX01000005.1	Protein Homology	CDS	8326	9153	.	+	0	ID=cds-WP_011166578.1;Parent=gene-TS60_RS02085;Dbxref=GenBank:WP_011166578.1;Name=WP_011166578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862671.1;locus_tag=TS60_RS02085;product=hypothetical protein;protein_id=WP_011166578.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	9420	9599	.	+	.	ID=gene-TS60_RS02090;Name=TS60_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02090;old_locus_tag=TS60_0444
NZ_LAEX01000005.1	Protein Homology	CDS	9420	9599	.	+	0	ID=cds-WP_011166579.1;Parent=gene-TS60_RS02090;Dbxref=GenBank:WP_011166579.1;Name=WP_011166579.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166579.1;locus_tag=TS60_RS02090;product=lipoprotein;protein_id=WP_011166579.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	pseudogene	9979	10580	.	+	.	ID=gene-TS60_RS07805;Name=TS60_RS07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07805;partial=true;pseudo=true;start_range=.,9979
NZ_LAEX01000005.1	Protein Homology	CDS	9979	10580	.	+	0	ID=cds-TS60_RS07805;Parent=gene-TS60_RS07805;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954660.1;locus_tag=TS60_RS07805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9979;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	11462	11806	.	+	.	ID=gene-TS60_RS02105;Name=TS60_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02105;old_locus_tag=TS60_0447
NZ_LAEX01000005.1	Protein Homology	CDS	11462	11806	.	+	0	ID=cds-WP_011166581.1;Parent=gene-TS60_RS02105;Dbxref=GenBank:WP_011166581.1;Name=WP_011166581.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166581.1;locus_tag=TS60_RS02105;product=lipoprotein;protein_id=WP_011166581.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	12280	12609	.	+	.	ID=gene-TS60_RS02110;Name=TS60_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02110;old_locus_tag=TS60_0448
NZ_LAEX01000005.1	Protein Homology	CDS	12280	12609	.	+	0	ID=cds-WP_015545335.1;Parent=gene-TS60_RS02110;Dbxref=GenBank:WP_015545335.1;Name=WP_015545335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF038029.1;locus_tag=TS60_RS02110;product=lipoprotein;protein_id=WP_015545335.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	13245	13694	.	+	.	ID=gene-TS60_RS02115;Name=TS60_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02115;old_locus_tag=TS60_0449
NZ_LAEX01000005.1	Protein Homology	CDS	13245	13694	.	+	0	ID=cds-WP_011166583.1;Parent=gene-TS60_RS02115;Dbxref=GenBank:WP_011166583.1;Name=WP_011166583.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387455.1;locus_tag=TS60_RS02115;product=PTS sugar transporter subunit IIA;protein_id=WP_011166583.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	13706	15514	.	+	.	ID=gene-TS60_RS02120;Name=TS60_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02120;old_locus_tag=TS60_0450
NZ_LAEX01000005.1	Protein Homology	CDS	13706	15514	.	+	0	ID=cds-WP_011166584.1;Parent=gene-TS60_RS02120;Dbxref=GenBank:WP_011166584.1;Name=WP_011166584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387454.1;locus_tag=TS60_RS02120;product=PTS ascorbate-specific subunit IIBC;protein_id=WP_011166584.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	15514	16170	.	+	.	ID=gene-TS60_RS02125;Name=TS60_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02125;old_locus_tag=TS60_0451
NZ_LAEX01000005.1	Protein Homology	CDS	15514	16170	.	+	0	ID=cds-WP_011166585.1;Parent=gene-TS60_RS02125;Dbxref=GenBank:WP_011166585.1;Name=WP_011166585.1;Ontology_term=GO:0004750,GO:0046872;gbkey=CDS;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166585.1;locus_tag=TS60_RS02125;product=ribulose-phosphate 3-epimerase;protein_id=WP_011166585.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	16358	17071	.	+	.	ID=gene-TS60_RS02130;Name=TS60_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02130;old_locus_tag=TS60_0452
NZ_LAEX01000005.1	Protein Homology	CDS	16358	17071	.	+	0	ID=cds-WP_011166586.1;Parent=gene-TS60_RS02130;Dbxref=GenBank:WP_011166586.1;Name=WP_011166586.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447871.1;locus_tag=TS60_RS02130;product=lipoprotein;protein_id=WP_011166586.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	17363	19240	.	+	.	ID=gene-TS60_RS02135;Name=TS60_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02135;old_locus_tag=TS60_0453
NZ_LAEX01000005.1	Protein Homology	CDS	17363	19240	.	+	0	ID=cds-WP_045596527.1;Parent=gene-TS60_RS02135;Dbxref=GenBank:WP_045596527.1;Name=WP_045596527.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545648.1;locus_tag=TS60_RS02135;product=ABC transporter ATP-binding protein;protein_id=WP_045596527.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	20283	21053	.	+	.	ID=gene-TS60_RS02145;Name=TS60_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02145;old_locus_tag=TS60_0455
NZ_LAEX01000005.1	Protein Homology	CDS	20283	21053	.	+	0	ID=cds-WP_227716909.1;Parent=gene-TS60_RS02145;Dbxref=GenBank:WP_227716909.1;Name=WP_227716909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166589.1;locus_tag=TS60_RS02145;product=hypothetical protein;protein_id=WP_227716909.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	21414	21554	.	+	.	ID=gene-TS60_RS07365;Name=TS60_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07365;old_locus_tag=TS60_0457
NZ_LAEX01000005.1	GeneMarkS-2+	CDS	21414	21554	.	+	0	ID=cds-WP_176687146.1;Parent=gene-TS60_RS07365;Dbxref=GenBank:WP_176687146.1;Name=WP_176687146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07365;product=hypothetical protein;protein_id=WP_176687146.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	21499	23613	.	+	.	ID=gene-TS60_RS02155;Name=TS60_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02155;old_locus_tag=TS60_0458
NZ_LAEX01000005.1	Protein Homology	CDS	21499	23613	.	+	0	ID=cds-WP_015545307.1;Parent=gene-TS60_RS02155;Dbxref=GenBank:WP_015545307.1;Name=WP_015545307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545307.1;locus_tag=TS60_RS02155;product=hypothetical protein;protein_id=WP_015545307.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	23871	23993	.	-	.	ID=gene-TS60_RS07690;Name=TS60_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07690
NZ_LAEX01000005.1	GeneMarkS-2+	CDS	23871	23993	.	-	0	ID=cds-WP_256122291.1;Parent=gene-TS60_RS07690;Dbxref=GenBank:WP_256122291.1;Name=WP_256122291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07690;product=hypothetical protein;protein_id=WP_256122291.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	24129	24281	.	-	.	ID=gene-TS60_RS07000;Name=TS60_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07000
NZ_LAEX01000005.1	GeneMarkS-2+	CDS	24129	24281	.	-	0	ID=cds-WP_173846762.1;Parent=gene-TS60_RS07000;Dbxref=GenBank:WP_173846762.1;Name=WP_173846762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07000;product=hypothetical protein;protein_id=WP_173846762.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	24547	26220	.	+	.	ID=gene-TS60_RS02160;Name=TS60_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02160;old_locus_tag=TS60_0459
NZ_LAEX01000005.1	Protein Homology	CDS	24547	26220	.	+	0	ID=cds-WP_011166528.1-3;Parent=gene-TS60_RS02160;Dbxref=GenBank:WP_011166528.1;Name=WP_011166528.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02160;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166528.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	26402	26962	.	-	.	ID=gene-TS60_RS02165;Name=TS60_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02165;old_locus_tag=TS60_0460
NZ_LAEX01000005.1	Protein Homology	CDS	26402	26962	.	-	0	ID=cds-WP_011166592.1;Parent=gene-TS60_RS02165;Dbxref=GenBank:WP_011166592.1;Name=WP_011166592.1;Ontology_term=GO:0006796,GO:0000287,GO:0004427,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862682.1;locus_tag=TS60_RS02165;product=inorganic diphosphatase;protein_id=WP_011166592.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	27111	27998	.	+	.	ID=gene-TS60_RS02170;Name=TS60_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02170;old_locus_tag=TS60_0461
NZ_LAEX01000005.1	Protein Homology	CDS	27111	27998	.	+	0	ID=cds-WP_011166593.1;Parent=gene-TS60_RS02170;Dbxref=GenBank:WP_011166593.1;Name=WP_011166593.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387445.1;locus_tag=TS60_RS02170;product=ECF transporter S component;protein_id=WP_011166593.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	28067	28762	.	+	.	ID=gene-TS60_RS02175;Name=TS60_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02175;old_locus_tag=TS60_0462
NZ_LAEX01000005.1	Protein Homology	CDS	28067	28762	.	+	0	ID=cds-WP_011166594.1;Parent=gene-TS60_RS02175;Dbxref=GenBank:WP_011166594.1;Name=WP_011166594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387444.1;locus_tag=TS60_RS02175;product=hypothetical protein;protein_id=WP_011166594.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	28771	29439	.	+	.	ID=gene-TS60_RS02180;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=TS60_RS02180;old_locus_tag=TS60_0463
NZ_LAEX01000005.1	Protein Homology	CDS	28771	29439	.	+	0	ID=cds-WP_011166595.1;Parent=gene-TS60_RS02180;Dbxref=GenBank:WP_011166595.1;Name=WP_011166595.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447859.1;locus_tag=TS60_RS02180;product=(d)CMP kinase;protein_id=WP_011166595.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	29439	30746	.	+	.	ID=gene-TS60_RS02185;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=TS60_RS02185;old_locus_tag=TS60_0464
NZ_LAEX01000005.1	Protein Homology	CDS	29439	30746	.	+	0	ID=cds-WP_011166596.1;Parent=gene-TS60_RS02185;Dbxref=GenBank:WP_011166596.1;Name=WP_011166596.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447858.1;locus_tag=TS60_RS02185;product=ribosome biogenesis GTPase Der;protein_id=WP_011166596.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	30748	31746	.	+	.	ID=gene-TS60_RS02190;Name=TS60_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02190;old_locus_tag=TS60_0465
NZ_LAEX01000005.1	Protein Homology	CDS	30748	31746	.	+	0	ID=cds-WP_011166597.1;Parent=gene-TS60_RS02190;Dbxref=GenBank:WP_011166597.1;Name=WP_011166597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166597.1;locus_tag=TS60_RS02190;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_011166597.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	31778	32050	.	+	.	ID=gene-TS60_RS02195;Name=TS60_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02195;old_locus_tag=TS60_0466
NZ_LAEX01000005.1	Protein Homology	CDS	31778	32050	.	+	0	ID=cds-WP_011166598.1;Parent=gene-TS60_RS02195;Dbxref=GenBank:WP_011166598.1;Name=WP_011166598.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166598.1;locus_tag=TS60_RS02195;product=HU family DNA-binding protein;protein_id=WP_011166598.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	32108	32644	.	+	.	ID=gene-TS60_RS02200;Name=TS60_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02200;old_locus_tag=TS60_0467
NZ_LAEX01000005.1	Protein Homology	CDS	32108	32644	.	+	0	ID=cds-WP_045596530.1;Parent=gene-TS60_RS02200;Dbxref=GenBank:WP_045596530.1;Name=WP_045596530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269533.1;locus_tag=TS60_RS02200;product=DnaD family protein;protein_id=WP_045596530.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	pseudogene	32616	32699	.	-	.	ID=gene-TS60_RS07810;Name=TS60_RS07810;end_range=32699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07810;partial=true;pseudo=true
NZ_LAEX01000005.1	Protein Homology	CDS	32616	32699	.	-	0	ID=cds-TS60_RS07810;Parent=gene-TS60_RS07810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387439.1;locus_tag=TS60_RS07810;partial=true;product=Holliday junction resolvase RecU;pseudo=true;transl_table=4
NZ_LAEX01000005.1	RefSeq	gene	32752	32904	.	+	.	ID=gene-TS60_RS06885;Name=TS60_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06885;old_locus_tag=TS60_0468
NZ_LAEX01000005.1	GeneMarkS-2+	CDS	32752	32904	.	+	0	ID=cds-WP_015545426.1;Parent=gene-TS60_RS06885;Dbxref=GenBank:WP_015545426.1;Name=WP_015545426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS06885;product=hypothetical protein;protein_id=WP_015545426.1;transl_table=4
NZ_LAEX01000005.1	RefSeq	pseudogene	32945	34608	.	-	.	ID=gene-TS60_RS05865;Name=TS60_RS05865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05865;pseudo=true
NZ_LAEX01000005.1	Protein Homology	CDS	32945	34608	.	-	0	ID=cds-TS60_RS05865;Parent=gene-TS60_RS05865;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05865;product=IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000005.1	RefSeq	pseudogene	34730	34901	.	+	.	ID=gene-TS60_RS05870;Name=TS60_RS05870;end_range=34901,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05870;partial=true;pseudo=true
NZ_LAEX01000005.1	Protein Homology	CDS	34730	34901	.	+	0	ID=cds-TS60_RS05870;Parent=gene-TS60_RS05870;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0003677;end_range=34901,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS05870;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=4
##sequence-region NZ_LAEX01000006.1 1 132729
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000006.1	RefSeq	region	1	132729	.	+	.	ID=NZ_LAEX01000006.1:1..132729;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000006.1	RefSeq	pseudogene	1	119	.	+	.	ID=gene-TS60_RS07815;Name=TS60_RS07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07815;partial=true;pseudo=true;start_range=.,1
NZ_LAEX01000006.1	Protein Homology	CDS	1	119	.	+	2	ID=cds-TS60_RS07815;Parent=gene-TS60_RS07815;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545501.1;locus_tag=TS60_RS07815;partial=true;product=glycine cleavage system protein H;pseudo=true;start_range=.,1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	753	980	.	+	.	ID=gene-TS60_RS07370;Name=TS60_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07370;old_locus_tag=TS60_0471
NZ_LAEX01000006.1	GeneMarkS-2+	CDS	753	980	.	+	0	ID=cds-WP_236252322.1;Parent=gene-TS60_RS07370;Dbxref=GenBank:WP_236252322.1;Name=WP_236252322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07370;product=hypothetical protein;protein_id=WP_236252322.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	958	1998	.	+	.	ID=gene-TS60_RS02225;Name=TS60_RS02225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02225;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	958	1998	.	+	0	ID=cds-TS60_RS02225;Parent=gene-TS60_RS02225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166709.1;locus_tag=TS60_RS02225;product=lipoate--protein ligase;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	1998	3177	.	+	.	ID=gene-TS60_RS02230;Name=TS60_RS02230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02230;old_locus_tag=TS60_0474;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	1998	3177	.	+	0	ID=cds-TS60_RS02230;Parent=gene-TS60_RS02230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862771.1;locus_tag=TS60_RS02230;product=NADH-dependent flavin oxidoreductase;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	3254	4665	.	+	.	ID=gene-TS60_RS06505;Name=TS60_RS06505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06505;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	3254	4665	.	+	0	ID=cds-TS60_RS06505;Parent=gene-TS60_RS06505;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06505;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	4716	6167	.	-	.	ID=gene-TS60_RS02250;Name=TS60_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02250;old_locus_tag=TS60_0479
NZ_LAEX01000006.1	Protein Homology	CDS	4716	6167	.	-	0	ID=cds-WP_236252323.1;Parent=gene-TS60_RS02250;Dbxref=GenBank:WP_236252323.1;Name=WP_236252323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166707.1;locus_tag=TS60_RS02250;product=BspA family leucine-rich repeat surface protein;protein_id=WP_236252323.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	6169	7719	.	-	.	ID=gene-TS60_RS02255;Name=TS60_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02255;old_locus_tag=TS60_0480
NZ_LAEX01000006.1	Protein Homology	CDS	6169	7719	.	-	0	ID=cds-WP_011166706.1;Parent=gene-TS60_RS02255;Dbxref=GenBank:WP_011166706.1;Name=WP_011166706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166706.1;locus_tag=TS60_RS02255;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166706.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	7970	8110	.	-	.	ID=gene-TS60_RS05885;Name=TS60_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05885;old_locus_tag=TS60_0481
NZ_LAEX01000006.1	Protein Homology	CDS	7970	8110	.	-	0	ID=cds-WP_015545288.1;Parent=gene-TS60_RS05885;Dbxref=GenBank:WP_015545288.1;Name=WP_015545288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545288.1;locus_tag=TS60_RS05885;product=hypothetical protein;protein_id=WP_015545288.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	8307	8675	.	-	.	ID=gene-TS60_RS02265;Name=TS60_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02265;old_locus_tag=TS60_0482
NZ_LAEX01000006.1	GeneMarkS-2+	CDS	8307	8675	.	-	0	ID=cds-WP_227716891.1;Parent=gene-TS60_RS02265;Dbxref=GenBank:WP_227716891.1;Name=WP_227716891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS02265;product=hypothetical protein;protein_id=WP_227716891.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	8772	10445	.	+	.	ID=gene-TS60_RS02270;Name=TS60_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02270;old_locus_tag=TS60_0483
NZ_LAEX01000006.1	Protein Homology	CDS	8772	10445	.	+	0	ID=cds-WP_011166704.1;Parent=gene-TS60_RS02270;Dbxref=GenBank:WP_011166704.1;Name=WP_011166704.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02270;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166704.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	10657	12525	.	-	.	ID=gene-TS60_RS02275;Name=TS60_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02275;old_locus_tag=TS60_0484
NZ_LAEX01000006.1	Protein Homology	CDS	10657	12525	.	-	0	ID=cds-WP_011166703.1;Parent=gene-TS60_RS02275;Dbxref=GenBank:WP_011166703.1;Name=WP_011166703.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166703.1;locus_tag=TS60_RS02275;product=P68 family surface lipoprotein;protein_id=WP_011166703.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	12652	13461	.	-	.	ID=gene-TS60_RS02280;Name=TS60_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02280;old_locus_tag=TS60_0485
NZ_LAEX01000006.1	Protein Homology	CDS	12652	13461	.	-	0	ID=cds-WP_011166702.1;Parent=gene-TS60_RS02280;Dbxref=GenBank:WP_011166702.1;Name=WP_011166702.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447755.1;locus_tag=TS60_RS02280;product=ABC transporter permease subunit;protein_id=WP_011166702.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	13439	14452	.	-	.	ID=gene-TS60_RS02285;Name=TS60_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02285;old_locus_tag=TS60_0486
NZ_LAEX01000006.1	Protein Homology	CDS	13439	14452	.	-	0	ID=cds-WP_015545349.1;Parent=gene-TS60_RS02285;Dbxref=GenBank:WP_015545349.1;Name=WP_015545349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447756.1;locus_tag=TS60_RS02285;product=sugar ABC transporter permease;protein_id=WP_015545349.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	14445	15665	.	-	.	ID=gene-TS60_RS02290;Name=TS60_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02290;old_locus_tag=TS60_0487
NZ_LAEX01000006.1	Protein Homology	CDS	14445	15665	.	-	0	ID=cds-WP_011166700.1;Parent=gene-TS60_RS02290;Dbxref=GenBank:WP_011166700.1;Name=WP_011166700.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447757.1;locus_tag=TS60_RS02290;product=ATP-binding cassette domain-containing protein;protein_id=WP_011166700.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	16041	16931	.	+	.	ID=gene-TS60_RS07940;Name=TS60_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07940;old_locus_tag=TS60_0488
NZ_LAEX01000006.1	Protein Homology	CDS	16041	16931	.	+	0	ID=cds-WP_015545460.1;Parent=gene-TS60_RS07940;Dbxref=GenBank:WP_015545460.1;Name=WP_015545460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545460.1;locus_tag=TS60_RS07940;product=MFS transporter;protein_id=WP_015545460.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	17001	17555	.	+	.	ID=gene-TS60_RS07945;Name=TS60_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07945;old_locus_tag=TS60_0489
NZ_LAEX01000006.1	GeneMarkS-2+	CDS	17001	17555	.	+	0	ID=cds-WP_236252324.1;Parent=gene-TS60_RS07945;Dbxref=GenBank:WP_236252324.1;Name=WP_236252324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07945;product=hypothetical protein;protein_id=WP_236252324.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	17597	19780	.	-	.	ID=gene-TS60_RS02300;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=TS60_RS02300;old_locus_tag=TS60_0490
NZ_LAEX01000006.1	Protein Homology	CDS	17597	19780	.	-	0	ID=cds-WP_015545313.1;Parent=gene-TS60_RS02300;Dbxref=GenBank:WP_015545313.1;Name=WP_015545313.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862764.1;locus_tag=TS60_RS02300;product=SF1B family DNA helicase RecD2;protein_id=WP_015545313.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	19888	22584	.	-	.	ID=gene-TS60_RS02305;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=TS60_RS02305;old_locus_tag=TS60_0491
NZ_LAEX01000006.1	Protein Homology	CDS	19888	22584	.	-	0	ID=cds-WP_015545306.1;Parent=gene-TS60_RS02305;Dbxref=GenBank:WP_015545306.1;Name=WP_015545306.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862763.1;locus_tag=TS60_RS02305;product=DNA topoisomerase IV subunit A;protein_id=WP_015545306.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	22586	24517	.	-	.	ID=gene-TS60_RS02310;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=TS60_RS02310;old_locus_tag=TS60_0492
NZ_LAEX01000006.1	Protein Homology	CDS	22586	24517	.	-	0	ID=cds-WP_011166694.1;Parent=gene-TS60_RS02310;Dbxref=GenBank:WP_011166694.1;Name=WP_011166694.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697794.1;locus_tag=TS60_RS02310;product=DNA topoisomerase IV subunit B;protein_id=WP_011166694.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	24704	26119	.	-	.	ID=gene-TS60_RS02315;Name=TS60_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02315;old_locus_tag=TS60_0493
NZ_LAEX01000006.1	Protein Homology	CDS	24704	26119	.	-	0	ID=cds-WP_011166693.1;Parent=gene-TS60_RS02315;Dbxref=GenBank:WP_011166693.1;Name=WP_011166693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269448.1;locus_tag=TS60_RS02315;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_011166693.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	26287	27054	.	-	.	ID=gene-TS60_RS02320;Name=TS60_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02320;old_locus_tag=TS60_0494
NZ_LAEX01000006.1	Protein Homology	CDS	26287	27054	.	-	0	ID=cds-WP_011166692.1;Parent=gene-TS60_RS02320;Dbxref=GenBank:WP_011166692.1;Name=WP_011166692.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862761.1;locus_tag=TS60_RS02320;product=TrmH family RNA methyltransferase;protein_id=WP_011166692.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	27071	27574	.	-	.	ID=gene-TS60_RS02325;Name=TS60_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02325;old_locus_tag=TS60_0495
NZ_LAEX01000006.1	Protein Homology	CDS	27071	27574	.	-	0	ID=cds-WP_015545320.1;Parent=gene-TS60_RS02325;Dbxref=GenBank:WP_015545320.1;Name=WP_015545320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364013.1;locus_tag=TS60_RS02325;product=dUTP diphosphatase;protein_id=WP_015545320.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	27614	28060	.	-	.	ID=gene-TS60_RS02330;Name=TS60_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02330;old_locus_tag=TS60_0496
NZ_LAEX01000006.1	Protein Homology	CDS	27614	28060	.	-	0	ID=cds-WP_011166690.1;Parent=gene-TS60_RS02330;Dbxref=GenBank:WP_011166690.1;Name=WP_011166690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166690.1;locus_tag=TS60_RS02330;product=hypothetical protein;protein_id=WP_011166690.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	28086	29369	.	-	.	ID=gene-TS60_RS02335;Name=TS60_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02335;old_locus_tag=TS60_0497
NZ_LAEX01000006.1	Protein Homology	CDS	28086	29369	.	-	0	ID=cds-WP_011166689.1;Parent=gene-TS60_RS02335;Dbxref=GenBank:WP_011166689.1;Name=WP_011166689.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364005.1;locus_tag=TS60_RS02335;product=glucose-6-phosphate isomerase;protein_id=WP_011166689.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	29588	31484	.	-	.	ID=gene-TS60_RS02340;Name=TS60_RS02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02340;old_locus_tag=TS60_0498;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	29588	31484	.	-	0	ID=cds-TS60_RS02340;Parent=gene-TS60_RS02340;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697799.1;locus_tag=TS60_RS02340;product=M13 family metallopeptidase;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	31505	32068	.	-	.	ID=gene-TS60_RS02345;Name=TS60_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02345;old_locus_tag=TS60_0499
NZ_LAEX01000006.1	Protein Homology	CDS	31505	32068	.	-	0	ID=cds-WP_011166687.1;Parent=gene-TS60_RS02345;Dbxref=GenBank:WP_011166687.1;Name=WP_011166687.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862756.1;locus_tag=TS60_RS02345;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011166687.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	32061	32498	.	-	.	ID=gene-TS60_RS02350;Name=TS60_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02350;old_locus_tag=TS60_0500
NZ_LAEX01000006.1	Protein Homology	CDS	32061	32498	.	-	0	ID=cds-WP_011166686.1;Parent=gene-TS60_RS02350;Dbxref=GenBank:WP_011166686.1;Name=WP_011166686.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862755.1;locus_tag=TS60_RS02350;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_011166686.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	32501	33739	.	-	.	ID=gene-TS60_RS02355;Name=TS60_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02355;old_locus_tag=TS60_0501
NZ_LAEX01000006.1	Protein Homology	CDS	32501	33739	.	-	0	ID=cds-WP_011166685.1;Parent=gene-TS60_RS02355;Dbxref=GenBank:WP_011166685.1;Name=WP_011166685.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447773.1;locus_tag=TS60_RS02355;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_011166685.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	33942	36854	.	+	.	ID=gene-TS60_RS02360;Name=TS60_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02360;old_locus_tag=TS60_0502
NZ_LAEX01000006.1	Protein Homology	CDS	33942	36854	.	+	0	ID=cds-WP_011166684.1;Parent=gene-TS60_RS02360;Dbxref=GenBank:WP_011166684.1;Name=WP_011166684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545514.1;locus_tag=TS60_RS02360;product=lipoprotein;protein_id=WP_011166684.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	36854	39007	.	+	.	ID=gene-TS60_RS02365;Name=TS60_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02365;old_locus_tag=TS60_0503
NZ_LAEX01000006.1	Protein Homology	CDS	36854	39007	.	+	0	ID=cds-WP_011166683.1;Parent=gene-TS60_RS02365;Dbxref=GenBank:WP_011166683.1;Name=WP_011166683.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584394.1;locus_tag=TS60_RS02365;product=lipoprotein;protein_id=WP_011166683.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	39010	39408	.	+	.	ID=gene-TS60_RS02370;Name=TS60_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02370;old_locus_tag=TS60_0504
NZ_LAEX01000006.1	Protein Homology	CDS	39010	39408	.	+	0	ID=cds-WP_011166682.1;Parent=gene-TS60_RS02370;Dbxref=GenBank:WP_011166682.1;Name=WP_011166682.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447776.1;locus_tag=TS60_RS02370;product=HIT family protein;protein_id=WP_011166682.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	39439	40419	.	-	.	ID=gene-TS60_RS02375;Name=TS60_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02375;old_locus_tag=TS60_0505
NZ_LAEX01000006.1	Protein Homology	CDS	39439	40419	.	-	0	ID=cds-WP_011166681.1;Parent=gene-TS60_RS02375;Dbxref=GenBank:WP_011166681.1;Name=WP_011166681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269458.1;locus_tag=TS60_RS02375;product=3'-5' exoribonuclease YhaM family protein;protein_id=WP_011166681.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	40492	41145	.	-	.	ID=gene-TS60_RS02380;Name=TS60_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02380;old_locus_tag=TS60_0506
NZ_LAEX01000006.1	Protein Homology	CDS	40492	41145	.	-	0	ID=cds-WP_011166680.1;Parent=gene-TS60_RS02380;Dbxref=GenBank:WP_011166680.1;Name=WP_011166680.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697806.1;locus_tag=TS60_RS02380;product=uracil-DNA glycosylase;protein_id=WP_011166680.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	41138	42069	.	-	.	ID=gene-TS60_RS07825;Name=TS60_RS07825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07825;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	41138	42069	.	-	0	ID=cds-TS60_RS07825;Parent=gene-TS60_RS07825;Note=frameshifted;Ontology_term=GO:0004476,GO:0008270;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166679.1;locus_tag=TS60_RS07825;product=type I phosphomannose isomerase catalytic subunit;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	42095	43411	.	-	.	ID=gene-TS60_RS02390;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=TS60_RS02390;old_locus_tag=TS60_0508
NZ_LAEX01000006.1	Protein Homology	CDS	42095	43411	.	-	0	ID=cds-WP_011166678.1;Parent=gene-TS60_RS02390;Dbxref=GenBank:WP_011166678.1;Name=WP_011166678.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166678.1;locus_tag=TS60_RS02390;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_011166678.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	43404	44087	.	-	.	ID=gene-TS60_RS02395;Name=TS60_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02395;old_locus_tag=TS60_0509
NZ_LAEX01000006.1	Protein Homology	CDS	43404	44087	.	-	0	ID=cds-WP_011166677.1;Parent=gene-TS60_RS02395;Dbxref=GenBank:WP_011166677.1;Name=WP_011166677.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697808.1;locus_tag=TS60_RS02395;product=copper homeostasis protein CutC;protein_id=WP_011166677.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	44078	45241	.	-	.	ID=gene-TS60_RS02400;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=TS60_RS02400;old_locus_tag=TS60_0510
NZ_LAEX01000006.1	Protein Homology	CDS	44078	45241	.	-	0	ID=cds-WP_011166676.1;Parent=gene-TS60_RS02400;Dbxref=GenBank:WP_011166676.1;Name=WP_011166676.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862746.1;locus_tag=TS60_RS02400;product=methionine adenosyltransferase;protein_id=WP_011166676.1;transl_table=4
NZ_LAEX01000006.1	cmsearch	riboswitch	45315	45410	.	-	.	ID=id-NZ_LAEX01000006.1:45315..45410;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_LAEX01000006.1	RefSeq	gene	45451	46224	.	-	.	ID=gene-TS60_RS02405;Name=TS60_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02405;old_locus_tag=TS60_0511
NZ_LAEX01000006.1	Protein Homology	CDS	45451	46224	.	-	0	ID=cds-WP_015545671.1;Parent=gene-TS60_RS02405;Dbxref=GenBank:WP_015545671.1;Name=WP_015545671.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729595.1;locus_tag=TS60_RS02405;product=TIGR00282 family metallophosphoesterase;protein_id=WP_015545671.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	46212	46553	.	-	.	ID=gene-TS60_RS02410;Name=TS60_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02410;old_locus_tag=TS60_0512
NZ_LAEX01000006.1	Protein Homology	CDS	46212	46553	.	-	0	ID=cds-WP_039275658.1;Parent=gene-TS60_RS02410;Dbxref=GenBank:WP_039275658.1;Name=WP_039275658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387353.1;locus_tag=TS60_RS02410;product=putative DNA-binding protein;protein_id=WP_039275658.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	46537	47784	.	-	.	ID=gene-TS60_RS02415;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=TS60_RS02415;old_locus_tag=TS60_0513
NZ_LAEX01000006.1	Protein Homology	CDS	46537	47784	.	-	0	ID=cds-WP_045596541.1;Parent=gene-TS60_RS02415;Dbxref=GenBank:WP_045596541.1;Name=WP_045596541.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545633.1;locus_tag=TS60_RS02415;product=signal recognition particle-docking protein FtsY;protein_id=WP_045596541.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	47851	48525	.	-	.	ID=gene-TS60_RS02420;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=TS60_RS02420;old_locus_tag=TS60_0514
NZ_LAEX01000006.1	Protein Homology	CDS	47851	48525	.	-	0	ID=cds-WP_015545483.1;Parent=gene-TS60_RS02420;Dbxref=GenBank:WP_015545483.1;Name=WP_015545483.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863090.1;locus_tag=TS60_RS02420;product=phosphate signaling complex protein PhoU;protein_id=WP_015545483.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	48534	49346	.	-	.	ID=gene-TS60_RS02425;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=TS60_RS02425;old_locus_tag=TS60_0515
NZ_LAEX01000006.1	Protein Homology	CDS	48534	49346	.	-	0	ID=cds-WP_015545672.1;Parent=gene-TS60_RS02425;Dbxref=GenBank:WP_015545672.1;Name=WP_015545672.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269467.1;locus_tag=TS60_RS02425;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_015545672.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	49339	51429	.	-	.	ID=gene-TS60_RS02430;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=TS60_RS02430;old_locus_tag=TS60_0516
NZ_LAEX01000006.1	Protein Homology	CDS	49339	51429	.	-	0	ID=cds-WP_045596542.1;Parent=gene-TS60_RS02430;Dbxref=GenBank:WP_045596542.1;Name=WP_045596542.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862741.1;locus_tag=TS60_RS02430;product=phosphate ABC transporter permease PstA;protein_id=WP_045596542.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	51489	52640	.	-	.	ID=gene-TS60_RS02435;Name=ptsS;gbkey=Gene;gene=ptsS;gene_biotype=protein_coding;locus_tag=TS60_RS02435;old_locus_tag=TS60_0517
NZ_LAEX01000006.1	Protein Homology	CDS	51489	52640	.	-	0	ID=cds-WP_011166669.1;Parent=gene-TS60_RS02435;Dbxref=GenBank:WP_011166669.1;Name=WP_011166669.1;gbkey=CDS;gene=ptsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166669.1;locus_tag=TS60_RS02435;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_011166669.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	53031	53174	.	-	.	ID=gene-TS60_RS07390;Name=TS60_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07390;old_locus_tag=TS60_0518
NZ_LAEX01000006.1	GeneMarkS-2+	CDS	53031	53174	.	-	0	ID=cds-WP_236252326.1;Parent=gene-TS60_RS07390;Dbxref=GenBank:WP_236252326.1;Name=WP_236252326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07390;product=hypothetical protein;protein_id=WP_236252326.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	53257	53341	.	-	.	ID=gene-TS60_RS02445;Name=TS60_RS02445;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS02445;old_locus_tag=TS60_0519
NZ_LAEX01000006.1	tRNAscan-SE	tRNA	53257	53341	.	-	.	ID=rna-TS60_RS02445;Parent=gene-TS60_RS02445;anticodon=(pos:complement(53305..53307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS02445;product=tRNA-Leu
NZ_LAEX01000006.1	tRNAscan-SE	exon	53257	53341	.	-	.	ID=exon-TS60_RS02445-1;Parent=rna-TS60_RS02445;anticodon=(pos:complement(53305..53307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS02445;product=tRNA-Leu
NZ_LAEX01000006.1	RefSeq	gene	53405	53602	.	-	.	ID=gene-TS60_RS02450;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=TS60_RS02450;old_locus_tag=TS60_0520
NZ_LAEX01000006.1	Protein Homology	CDS	53405	53602	.	-	0	ID=cds-WP_015545544.1;Parent=gene-TS60_RS02450;Dbxref=GenBank:WP_015545544.1;Name=WP_015545544.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447791.1;locus_tag=TS60_RS02450;product=50S ribosomal protein L28;protein_id=WP_015545544.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	53770	54081	.	+	.	ID=gene-TS60_RS02455;Name=TS60_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02455;old_locus_tag=TS60_0521
NZ_LAEX01000006.1	Protein Homology	CDS	53770	54081	.	+	0	ID=cds-WP_013729586.1;Parent=gene-TS60_RS02455;Dbxref=GenBank:WP_013729586.1;Name=WP_013729586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729586.1;locus_tag=TS60_RS02455;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_013729586.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	54107	55750	.	+	.	ID=gene-TS60_RS02460;Name=TS60_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02460;old_locus_tag=TS60_0522
NZ_LAEX01000006.1	Protein Homology	CDS	54107	55750	.	+	0	ID=cds-WP_011166665.1;Parent=gene-TS60_RS02460;Dbxref=GenBank:WP_011166665.1;Name=WP_011166665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862739.1;locus_tag=TS60_RS02460;product=DAK2 domain-containing protein;protein_id=WP_011166665.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	55783	56787	.	+	.	ID=gene-TS60_RS02465;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=TS60_RS02465;old_locus_tag=TS60_0523
NZ_LAEX01000006.1	Protein Homology	CDS	55783	56787	.	+	0	ID=cds-WP_011166664.1;Parent=gene-TS60_RS02465;Dbxref=GenBank:WP_011166664.1;Name=WP_011166664.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862738.1;locus_tag=TS60_RS02465;product=phosphate acyltransferase PlsX;protein_id=WP_011166664.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	56777	57475	.	+	.	ID=gene-TS60_RS02470;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=TS60_RS02470;old_locus_tag=TS60_0524
NZ_LAEX01000006.1	Protein Homology	CDS	56777	57475	.	+	0	ID=cds-WP_011166663.1;Parent=gene-TS60_RS02470;Dbxref=GenBank:WP_011166663.1;Name=WP_011166663.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166663.1;locus_tag=TS60_RS02470;product=ribonuclease III;protein_id=WP_011166663.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	57632	58084	.	+	.	ID=gene-TS60_RS02475;Name=TS60_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02475;old_locus_tag=TS60_0525
NZ_LAEX01000006.1	Protein Homology	CDS	57632	58084	.	+	0	ID=cds-WP_015545381.1;Parent=gene-TS60_RS02475;Dbxref=GenBank:WP_015545381.1;Name=WP_015545381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269475.1;locus_tag=TS60_RS02475;product=Panacea domain-containing protein;protein_id=WP_015545381.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	58087	58472	.	+	.	ID=gene-TS60_RS02480;Name=TS60_RS02480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02480;old_locus_tag=TS60_0526;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	58087	58472	.	+	0	ID=cds-TS60_RS02480;Parent=gene-TS60_RS02480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387365.1;locus_tag=TS60_RS02480;product=MAG6450 family protein;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	58788	61754	.	+	.	ID=gene-TS60_RS02485;Name=TS60_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02485;old_locus_tag=TS60_0527
NZ_LAEX01000006.1	Protein Homology	CDS	58788	61754	.	+	0	ID=cds-WP_011166660.1;Parent=gene-TS60_RS02485;Dbxref=GenBank:WP_011166660.1;Name=WP_011166660.1;Ontology_term=GO:0030261,GO:0051301,GO:0003677,GO:0003682,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,chromatin binding|0003682||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome condensation|0030261||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447799.1;locus_tag=TS60_RS02485;product=chromosome segregation protein SMC;protein_id=WP_011166660.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	61802	64054	.	-	.	ID=gene-TS60_RS02490;Name=TS60_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02490;old_locus_tag=TS60_0528
NZ_LAEX01000006.1	Protein Homology	CDS	61802	64054	.	-	0	ID=cds-WP_011166659.1;Parent=gene-TS60_RS02490;Dbxref=GenBank:WP_011166659.1;Name=WP_011166659.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166659.1;locus_tag=TS60_RS02490;product=RelA/SpoT family protein;protein_id=WP_011166659.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	64137	64649	.	-	.	ID=gene-TS60_RS02495;Name=TS60_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02495;old_locus_tag=TS60_0529
NZ_LAEX01000006.1	Protein Homology	CDS	64137	64649	.	-	0	ID=cds-WP_011166658.1;Parent=gene-TS60_RS02495;Dbxref=GenBank:WP_011166658.1;Name=WP_011166658.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862735.1;locus_tag=TS60_RS02495;product=adenine phosphoribosyltransferase;protein_id=WP_011166658.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	64661	68815	.	-	.	ID=gene-TS60_RS02500;Name=TS60_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02500;old_locus_tag=TS60_0530
NZ_LAEX01000006.1	Protein Homology	CDS	64661	68815	.	-	0	ID=cds-WP_039275646.1;Parent=gene-TS60_RS02500;Dbxref=GenBank:WP_039275646.1;Name=WP_039275646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862734.1;locus_tag=TS60_RS02500;product=protein translocase SecDF%2C variant type;protein_id=WP_039275646.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	68930	70444	.	-	.	ID=gene-TS60_RS02505;Name=TS60_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02505;old_locus_tag=TS60_0531
NZ_LAEX01000006.1	Protein Homology	CDS	68930	70444	.	-	0	ID=cds-WP_015545622.1;Parent=gene-TS60_RS02505;Dbxref=GenBank:WP_015545622.1;Name=WP_015545622.1;Ontology_term=GO:0055085,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545622.1;locus_tag=TS60_RS02505;product=YitT family ABC transporter;protein_id=WP_015545622.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	70484	71845	.	-	.	ID=gene-TS60_RS02510;Name=TS60_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02510;old_locus_tag=TS60_0532
NZ_LAEX01000006.1	Protein Homology	CDS	70484	71845	.	-	0	ID=cds-WP_011166653.1;Parent=gene-TS60_RS02510;Dbxref=GenBank:WP_011166653.1;Name=WP_011166653.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729574.1;locus_tag=TS60_RS02510;product=DEAD/DEAH box helicase;protein_id=WP_011166653.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	71854	72630	.	-	.	ID=gene-TS60_RS02515;Name=TS60_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02515;old_locus_tag=TS60_0533
NZ_LAEX01000006.1	Protein Homology	CDS	71854	72630	.	-	0	ID=cds-WP_011166652.1;Parent=gene-TS60_RS02515;Dbxref=GenBank:WP_011166652.1;Name=WP_011166652.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269482.1;locus_tag=TS60_RS02515;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_011166652.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	72617	73294	.	-	.	ID=gene-TS60_RS02520;Name=TS60_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02520;old_locus_tag=TS60_0534
NZ_LAEX01000006.1	Protein Homology	CDS	72617	73294	.	-	0	ID=cds-WP_011166651.1;Parent=gene-TS60_RS02520;Dbxref=GenBank:WP_011166651.1;Name=WP_011166651.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729572.1;locus_tag=TS60_RS02520;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_011166651.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	73294	74814	.	-	.	ID=gene-TS60_RS02525;Name=TS60_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02525;old_locus_tag=TS60_0535
NZ_LAEX01000006.1	Protein Homology	CDS	73294	74814	.	-	0	ID=cds-WP_015545287.1;Parent=gene-TS60_RS02525;Dbxref=GenBank:WP_015545287.1;Name=WP_015545287.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729571.1;locus_tag=TS60_RS02525;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_015545287.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	74817	76655	.	-	.	ID=gene-TS60_RS02530;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=TS60_RS02530;old_locus_tag=TS60_0536
NZ_LAEX01000006.1	Protein Homology	CDS	74817	76655	.	-	0	ID=cds-WP_011166649.1;Parent=gene-TS60_RS02530;Dbxref=GenBank:WP_011166649.1;Name=WP_011166649.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729570.1;locus_tag=TS60_RS02530;product=DNA primase;protein_id=WP_011166649.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	76690	78060	.	-	.	ID=gene-TS60_RS06520;Name=TS60_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06520;old_locus_tag=TS60_0537
NZ_LAEX01000006.1	Protein Homology	CDS	76690	78060	.	-	0	ID=cds-WP_011166648.1;Parent=gene-TS60_RS06520;Dbxref=GenBank:WP_011166648.1;Name=WP_011166648.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862727.1;locus_tag=TS60_RS06520;product=glycine--tRNA ligase;protein_id=WP_011166648.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	78124	78873	.	-	.	ID=gene-TS60_RS06525;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=TS60_RS06525;old_locus_tag=TS60_0538
NZ_LAEX01000006.1	Protein Homology	CDS	78124	78873	.	-	0	ID=cds-WP_011166647.1;Parent=gene-TS60_RS06525;Dbxref=GenBank:WP_011166647.1;Name=WP_011166647.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697827.1;locus_tag=TS60_RS06525;product=DNA repair protein RecO;protein_id=WP_011166647.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	78873	79778	.	-	.	ID=gene-TS60_RS02545;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=TS60_RS02545;old_locus_tag=TS60_0539
NZ_LAEX01000006.1	Protein Homology	CDS	78873	79778	.	-	0	ID=cds-WP_011166646.1;Parent=gene-TS60_RS02545;Dbxref=GenBank:WP_011166646.1;Name=WP_011166646.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862726.1;locus_tag=TS60_RS02545;product=GTPase Era;protein_id=WP_011166646.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	79782	80276	.	-	.	ID=gene-TS60_RS02550;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=TS60_RS02550;old_locus_tag=TS60_0540
NZ_LAEX01000006.1	Protein Homology	CDS	79782	80276	.	-	0	ID=cds-WP_011166645.1;Parent=gene-TS60_RS02550;Dbxref=GenBank:WP_011166645.1;Name=WP_011166645.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166645.1;locus_tag=TS60_RS02550;product=rRNA maturation RNase YbeY;protein_id=WP_011166645.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	80282	82067	.	-	.	ID=gene-TS60_RS02555;Name=TS60_RS02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02555;old_locus_tag=TS60_0542;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	80282	82067	.	-	0	ID=cds-TS60_RS02555;Parent=gene-TS60_RS02555;Note=frameshifted;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447813.1;locus_tag=TS60_RS02555;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	82165	82716	.	-	.	ID=gene-TS60_RS02560;Name=TS60_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02560;old_locus_tag=TS60_0543
NZ_LAEX01000006.1	Protein Homology	CDS	82165	82716	.	-	0	ID=cds-WP_011166642.1;Parent=gene-TS60_RS02560;Dbxref=GenBank:WP_011166642.1;Name=WP_011166642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729564.1;locus_tag=TS60_RS02560;product=DJ-1 family glyoxalase III;protein_id=WP_011166642.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	82764	88028	.	-	.	ID=gene-TS60_RS02565;Name=TS60_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02565;old_locus_tag=TS60_0544
NZ_LAEX01000006.1	Protein Homology	CDS	82764	88028	.	-	0	ID=cds-WP_039275635.1;Parent=gene-TS60_RS02565;Dbxref=GenBank:WP_039275635.1;Name=WP_039275635.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166641.1;locus_tag=TS60_RS02565;product=ABC transporter permease;protein_id=WP_039275635.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	88179	90641	.	+	.	ID=gene-TS60_RS02570;Name=TS60_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02570;old_locus_tag=TS60_0545
NZ_LAEX01000006.1	Protein Homology	CDS	88179	90641	.	+	0	ID=cds-WP_011166640.1;Parent=gene-TS60_RS02570;Dbxref=GenBank:WP_011166640.1;Name=WP_011166640.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862725.1;locus_tag=TS60_RS02570;product=MOLPALP family lipoprotein;protein_id=WP_011166640.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	90679	90869	.	+	.	ID=gene-TS60_RS07950;Name=TS60_RS07950;end_range=90869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07950;partial=true;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	90679	90869	.	+	0	ID=cds-TS60_RS07950;Parent=gene-TS60_RS07950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=90869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_265510105.1;locus_tag=TS60_RS07950;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	90896	92131	.	-	.	ID=gene-TS60_RS02575;Name=TS60_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02575;old_locus_tag=TS60_0546
NZ_LAEX01000006.1	Protein Homology	CDS	90896	92131	.	-	0	ID=cds-WP_011166639.1;Parent=gene-TS60_RS02575;Dbxref=GenBank:WP_011166639.1;Name=WP_011166639.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363915.1;locus_tag=TS60_RS02575;product=replication-associated recombination protein A;protein_id=WP_011166639.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	92248	94599	.	-	.	ID=gene-TS60_RS02580;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=TS60_RS02580;old_locus_tag=TS60_0547
NZ_LAEX01000006.1	Protein Homology	CDS	92248	94599	.	-	0	ID=cds-WP_015545289.1;Parent=gene-TS60_RS02580;Dbxref=GenBank:WP_015545289.1;Name=WP_015545289.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545289.1;locus_tag=TS60_RS02580;product=endopeptidase La;protein_id=WP_015545289.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	94722	96008	.	-	.	ID=gene-TS60_RS02585;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=TS60_RS02585;old_locus_tag=TS60_0548
NZ_LAEX01000006.1	Protein Homology	CDS	94722	96008	.	-	0	ID=cds-WP_011166637.1;Parent=gene-TS60_RS02585;Dbxref=GenBank:WP_011166637.1;Name=WP_011166637.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387387.1;locus_tag=TS60_RS02585;product=trigger factor;protein_id=WP_011166637.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	96025	96327	.	-	.	ID=gene-TS60_RS02590;Name=TS60_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02590;old_locus_tag=TS60_0549
NZ_LAEX01000006.1	Protein Homology	CDS	96025	96327	.	-	0	ID=cds-WP_011166636.1;Parent=gene-TS60_RS02590;Dbxref=GenBank:WP_011166636.1;Name=WP_011166636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166636.1;locus_tag=TS60_RS02590;product=MMB_0454 family protein;protein_id=WP_011166636.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	96345	96899	.	-	.	ID=gene-TS60_RS02595;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=TS60_RS02595;old_locus_tag=TS60_0550
NZ_LAEX01000006.1	Protein Homology	CDS	96345	96899	.	-	0	ID=cds-WP_011166635.1;Parent=gene-TS60_RS02595;Dbxref=GenBank:WP_011166635.1;Name=WP_011166635.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387389.1;locus_tag=TS60_RS02595;product=elongation factor P;protein_id=WP_011166635.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	96986	97939	.	-	.	ID=gene-TS60_RS02600;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=TS60_RS02600;old_locus_tag=TS60_0551
NZ_LAEX01000006.1	Protein Homology	CDS	96986	97939	.	-	0	ID=cds-WP_011166634.1;Parent=gene-TS60_RS02600;Dbxref=GenBank:WP_011166634.1;Name=WP_011166634.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166634.1;locus_tag=TS60_RS02600;product=methionyl-tRNA formyltransferase;protein_id=WP_011166634.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	97929	100073	.	-	.	ID=gene-TS60_RS02605;Name=TS60_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02605;old_locus_tag=TS60_0552
NZ_LAEX01000006.1	Protein Homology	CDS	97929	100073	.	-	0	ID=cds-WP_011166633.1;Parent=gene-TS60_RS02605;Dbxref=GenBank:WP_011166633.1;Name=WP_011166633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862718.1;locus_tag=TS60_RS02605;product=DUF2779 domain-containing protein;protein_id=WP_011166633.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	100151	100768	.	-	.	ID=gene-TS60_RS02610;Name=TS60_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02610;old_locus_tag=TS60_0553
NZ_LAEX01000006.1	Protein Homology	CDS	100151	100768	.	-	0	ID=cds-WP_011166632.1;Parent=gene-TS60_RS02610;Dbxref=GenBank:WP_011166632.1;Name=WP_011166632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729552.1;locus_tag=TS60_RS02610;product=hypothetical protein;protein_id=WP_011166632.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	100810	101937	.	-	.	ID=gene-TS60_RS02615;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=TS60_RS02615;old_locus_tag=TS60_0554
NZ_LAEX01000006.1	Protein Homology	CDS	100810	101937	.	-	0	ID=cds-WP_011166631.1;Parent=gene-TS60_RS02615;Dbxref=GenBank:WP_011166631.1;Name=WP_011166631.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269505.1;locus_tag=TS60_RS02615;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_011166631.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	102034	102795	.	-	.	ID=gene-TS60_RS02620;Name=TS60_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02620;old_locus_tag=TS60_0555
NZ_LAEX01000006.1	Protein Homology	CDS	102034	102795	.	-	0	ID=cds-WP_181256977.1;Parent=gene-TS60_RS02620;Dbxref=GenBank:WP_181256977.1;Name=WP_181256977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166630.1;locus_tag=TS60_RS02620;product=hypothetical protein;protein_id=WP_181256977.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	102752	102853	.	-	.	ID=gene-TS60_RS07955;Name=TS60_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07955
NZ_LAEX01000006.1	Protein Homology	CDS	102752	102853	.	-	0	ID=cds-WP_394296899.1;Parent=gene-TS60_RS07955;Dbxref=GenBank:WP_394296899.1;Name=WP_394296899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045726.2;locus_tag=TS60_RS07955;product=Vmc-like lipoprotein signal peptide domain-containing protein;protein_id=WP_394296899.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	103330	103656	.	-	.	ID=gene-TS60_RS07960;Name=TS60_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07960
NZ_LAEX01000006.1	Protein Homology	CDS	103330	103656	.	-	0	ID=cds-WP_394297399.1;Parent=gene-TS60_RS07960;Dbxref=GenBank:WP_394297399.1;Name=WP_394297399.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045950.1;locus_tag=TS60_RS07960;product=MAG6090-like repeat-containing lipoprotein;protein_id=WP_394297399.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	104003	104647	.	-	.	ID=gene-TS60_RS02635;Name=TS60_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02635;old_locus_tag=TS60_0557
NZ_LAEX01000006.1	Protein Homology	CDS	104003	104647	.	-	0	ID=cds-WP_011166628.1;Parent=gene-TS60_RS02635;Dbxref=GenBank:WP_011166628.1;Name=WP_011166628.1;Ontology_term=GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387397.1;locus_tag=TS60_RS02635;product=deoxynucleoside kinase;protein_id=WP_011166628.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	104669	105325	.	-	.	ID=gene-TS60_RS02640;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=TS60_RS02640;old_locus_tag=TS60_0558
NZ_LAEX01000006.1	Protein Homology	CDS	104669	105325	.	-	0	ID=cds-WP_011166627.1;Parent=gene-TS60_RS02640;Dbxref=GenBank:WP_011166627.1;Name=WP_011166627.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166627.1;locus_tag=TS60_RS02640;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_011166627.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	105327	106430	.	-	.	ID=gene-TS60_RS02645;Name=TS60_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02645;old_locus_tag=TS60_0559
NZ_LAEX01000006.1	Protein Homology	CDS	105327	106430	.	-	0	ID=cds-WP_011166626.1;Parent=gene-TS60_RS02645;Dbxref=GenBank:WP_011166626.1;Name=WP_011166626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447834.1;locus_tag=TS60_RS02645;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_011166626.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	106448	106693	.	-	.	ID=gene-TS60_RS02650;Name=TS60_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02650;old_locus_tag=TS60_0560
NZ_LAEX01000006.1	Protein Homology	CDS	106448	106693	.	-	0	ID=cds-WP_011166625.1;Parent=gene-TS60_RS02650;Dbxref=GenBank:WP_011166625.1;Name=WP_011166625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166625.1;locus_tag=TS60_RS02650;product=TIGR04561 family membrane protein;protein_id=WP_011166625.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	106711	107448	.	-	.	ID=gene-TS60_RS02655;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=TS60_RS02655;old_locus_tag=TS60_0561
NZ_LAEX01000006.1	Protein Homology	CDS	106711	107448	.	-	0	ID=cds-WP_015545638.1;Parent=gene-TS60_RS02655;Dbxref=GenBank:WP_015545638.1;Name=WP_015545638.1;Ontology_term=GO:0009435,GO:0008795,GO:0005737;gbkey=CDS;gene=nadE;go_component=cytoplasm|0005737||IEA;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447835.1;locus_tag=TS60_RS02655;product=NAD(+) synthase;protein_id=WP_015545638.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	107450	108751	.	-	.	ID=gene-TS60_RS02660;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=TS60_RS02660;old_locus_tag=TS60_0562
NZ_LAEX01000006.1	Protein Homology	CDS	107450	108751	.	-	0	ID=cds-WP_011166623.1;Parent=gene-TS60_RS02660;Dbxref=GenBank:WP_011166623.1;Name=WP_011166623.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447836.1;locus_tag=TS60_RS02660;product=GTPase ObgE;protein_id=WP_011166623.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	108822	109133	.	-	.	ID=gene-TS60_RS02665;Name=TS60_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02665;old_locus_tag=TS60_0563
NZ_LAEX01000006.1	Protein Homology	CDS	108822	109133	.	-	0	ID=cds-WP_015545559.1;Parent=gene-TS60_RS02665;Dbxref=GenBank:WP_015545559.1;Name=WP_015545559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447837.1;locus_tag=TS60_RS02665;product=hypothetical protein;protein_id=WP_015545559.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	109123	109875	.	-	.	ID=gene-TS60_RS02670;Name=TS60_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02670;old_locus_tag=TS60_0564
NZ_LAEX01000006.1	Protein Homology	CDS	109123	109875	.	-	0	ID=cds-WP_011166621.1;Parent=gene-TS60_RS02670;Dbxref=GenBank:WP_011166621.1;Name=WP_011166621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166621.1;locus_tag=TS60_RS02670;product=DUF3196 family protein;protein_id=WP_011166621.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	109931	110007	.	-	.	ID=gene-TS60_RS02675;Name=TS60_RS02675;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS02675;old_locus_tag=TS60_0565
NZ_LAEX01000006.1	tRNAscan-SE	tRNA	109931	110007	.	-	.	ID=rna-TS60_RS02675;Parent=gene-TS60_RS02675;anticodon=(pos:complement(109971..109973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS02675;product=tRNA-Arg
NZ_LAEX01000006.1	tRNAscan-SE	exon	109931	110007	.	-	.	ID=exon-TS60_RS02675-1;Parent=rna-TS60_RS02675;anticodon=(pos:complement(109971..109973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS02675;product=tRNA-Arg
NZ_LAEX01000006.1	RefSeq	gene	110063	111670	.	-	.	ID=gene-TS60_RS02680;Name=TS60_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02680;old_locus_tag=TS60_0566
NZ_LAEX01000006.1	Protein Homology	CDS	110063	111670	.	-	0	ID=cds-WP_011166620.1;Parent=gene-TS60_RS02680;Dbxref=GenBank:WP_011166620.1;Name=WP_011166620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363871.1;locus_tag=TS60_RS02680;product=hypothetical protein;protein_id=WP_011166620.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	111710	113563	.	-	.	ID=gene-TS60_RS02685;Name=TS60_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02685;old_locus_tag=TS60_0567
NZ_LAEX01000006.1	Protein Homology	CDS	111710	113563	.	-	0	ID=cds-WP_015545427.1;Parent=gene-TS60_RS02685;Dbxref=GenBank:WP_015545427.1;Name=WP_015545427.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269518.1;locus_tag=TS60_RS02685;product=ABC transporter ATP-binding protein;protein_id=WP_015545427.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	113581	115452	.	-	.	ID=gene-TS60_RS02690;Name=TS60_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02690;old_locus_tag=TS60_0568
NZ_LAEX01000006.1	Protein Homology	CDS	113581	115452	.	-	0	ID=cds-WP_011166618.1;Parent=gene-TS60_RS02690;Dbxref=GenBank:WP_011166618.1;Name=WP_011166618.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269519.1;locus_tag=TS60_RS02690;product=ABC transporter ATP-binding protein;protein_id=WP_011166618.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	115671	115976	.	-	.	ID=gene-TS60_RS02695;Name=TS60_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02695;old_locus_tag=TS60_0569
NZ_LAEX01000006.1	Protein Homology	CDS	115671	115976	.	-	0	ID=cds-WP_011166617.1;Parent=gene-TS60_RS02695;Dbxref=GenBank:WP_011166617.1;Name=WP_011166617.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035082.1;locus_tag=TS60_RS02695;product=single-stranded DNA-binding protein;protein_id=WP_011166617.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	116380	117154	.	+	.	ID=gene-TS60_RS07830;Name=TS60_RS07830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07830;partial=true;pseudo=true;start_range=.,116380
NZ_LAEX01000006.1	Protein Homology	CDS	116380	117154	.	+	0	ID=cds-TS60_RS07830;Parent=gene-TS60_RS07830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269333.1;locus_tag=TS60_RS07830;partial=true;product=amino acid--tRNA ligase-related protein;pseudo=true;start_range=.,116380;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	117252	118313	.	+	.	ID=gene-TS60_RS02715;Name=TS60_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02715;old_locus_tag=TS60_0573
NZ_LAEX01000006.1	Protein Homology	CDS	117252	118313	.	+	0	ID=cds-WP_039275626.1;Parent=gene-TS60_RS02715;Dbxref=GenBank:WP_039275626.1;Name=WP_039275626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545657.1;locus_tag=TS60_RS02715;product=BspA family leucine-rich repeat surface protein;protein_id=WP_039275626.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	118824	119447	.	-	.	ID=gene-TS60_RS02725;Name=TS60_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02725;old_locus_tag=TS60_0574
NZ_LAEX01000006.1	Protein Homology	CDS	118824	119447	.	-	0	ID=cds-WP_011166614.1;Parent=gene-TS60_RS02725;Dbxref=GenBank:WP_011166614.1;Name=WP_011166614.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862699.1;locus_tag=TS60_RS02725;product=ribonuclease HII;protein_id=WP_011166614.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	119441	120391	.	-	.	ID=gene-TS60_RS02730;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=TS60_RS02730;old_locus_tag=TS60_0575
NZ_LAEX01000006.1	Protein Homology	CDS	119441	120391	.	-	0	ID=cds-WP_011166613.1;Parent=gene-TS60_RS02730;Dbxref=GenBank:WP_011166613.1;Name=WP_011166613.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363860.1;locus_tag=TS60_RS02730;product=ribosome biogenesis GTPase YlqF;protein_id=WP_011166613.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	120483	120875	.	-	.	ID=gene-TS60_RS02735;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=TS60_RS02735;old_locus_tag=TS60_0576
NZ_LAEX01000006.1	Protein Homology	CDS	120483	120875	.	-	0	ID=cds-WP_011387413.1;Parent=gene-TS60_RS02735;Dbxref=GenBank:WP_011387413.1;Name=WP_011387413.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269524.1;locus_tag=TS60_RS02735;product=50S ribosomal protein L19;protein_id=WP_011387413.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	120877	121599	.	-	.	ID=gene-TS60_RS02740;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=TS60_RS02740;old_locus_tag=TS60_0577
NZ_LAEX01000006.1	Protein Homology	CDS	120877	121599	.	-	0	ID=cds-WP_011166611.1;Parent=gene-TS60_RS02740;Dbxref=GenBank:WP_011166611.1;Name=WP_011166611.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862697.1;locus_tag=TS60_RS02740;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_011166611.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	121601	122089	.	-	.	ID=gene-TS60_RS02745;Name=TS60_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02745;old_locus_tag=TS60_0578
NZ_LAEX01000006.1	Protein Homology	CDS	121601	122089	.	-	0	ID=cds-WP_011166610.1;Parent=gene-TS60_RS02745;Dbxref=GenBank:WP_011166610.1;Name=WP_011166610.1;Ontology_term=GO:0006364,GO:0042274,GO:0043022,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA,ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729528.1;locus_tag=TS60_RS02745;product=ribosome maturation factor RimM;protein_id=WP_011166610.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	122107	122433	.	-	.	ID=gene-TS60_RS02750;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=TS60_RS02750;old_locus_tag=TS60_0579
NZ_LAEX01000006.1	Protein Homology	CDS	122107	122433	.	-	0	ID=cds-WP_011166609.1;Parent=gene-TS60_RS02750;Dbxref=GenBank:WP_011166609.1;Name=WP_011166609.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269527.1;locus_tag=TS60_RS02750;product=30S ribosomal protein S16;protein_id=WP_011166609.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	122523	122990	.	-	.	ID=gene-TS60_RS02755;Name=TS60_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02755;old_locus_tag=TS60_0580
NZ_LAEX01000006.1	Protein Homology	CDS	122523	122990	.	-	0	ID=cds-WP_011166608.1;Parent=gene-TS60_RS02755;Dbxref=GenBank:WP_011166608.1;Name=WP_011166608.1;Ontology_term=GO:0032259,GO:0003723,GO:0070038,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (pseudouridine-N3-)-methyltransferase activity|0070038||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729526.1;locus_tag=TS60_RS02755;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011166608.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	122996	124339	.	-	.	ID=gene-TS60_RS02760;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=TS60_RS02760;old_locus_tag=TS60_0581
NZ_LAEX01000006.1	Protein Homology	CDS	122996	124339	.	-	0	ID=cds-WP_011166607.1;Parent=gene-TS60_RS02760;Dbxref=GenBank:WP_011166607.1;Name=WP_011166607.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862694.1;locus_tag=TS60_RS02760;product=signal recognition particle protein;protein_id=WP_011166607.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	124369	125898	.	-	.	ID=gene-TS60_RS02765;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=TS60_RS02765;old_locus_tag=TS60_0582
NZ_LAEX01000006.1	Protein Homology	CDS	124369	125898	.	-	0	ID=cds-WP_011166606.1;Parent=gene-TS60_RS02765;Dbxref=GenBank:WP_011166606.1;Name=WP_011166606.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269530.1;locus_tag=TS60_RS02765;product=ribonuclease Y;protein_id=WP_011166606.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	126048	127085	.	-	.	ID=gene-TS60_RS02770;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=TS60_RS02770;old_locus_tag=TS60_0583
NZ_LAEX01000006.1	Protein Homology	CDS	126048	127085	.	-	0	ID=cds-WP_011166605.1;Parent=gene-TS60_RS02770;Dbxref=GenBank:WP_011166605.1;Name=WP_011166605.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166605.1;locus_tag=TS60_RS02770;product=recombinase RecA;protein_id=WP_011166605.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	127124	127594	.	-	.	ID=gene-TS60_RS02775;Name=TS60_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02775;old_locus_tag=TS60_0584
NZ_LAEX01000006.1	Protein Homology	CDS	127124	127594	.	-	0	ID=cds-WP_015545303.1;Parent=gene-TS60_RS02775;Dbxref=GenBank:WP_015545303.1;Name=WP_015545303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545303.1;locus_tag=TS60_RS02775;product=CinA family protein;protein_id=WP_015545303.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	127634	127972	.	-	.	ID=gene-TS60_RS05920;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=TS60_RS05920
NZ_LAEX01000006.1	cmsearch	RNase_P_RNA	127634	127972	.	-	.	ID=rna-TS60_RS05920;Parent=gene-TS60_RS05920;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS05920;product=RNase P RNA component class B
NZ_LAEX01000006.1	cmsearch	exon	127634	127972	.	-	.	ID=exon-TS60_RS05920-1;Parent=rna-TS60_RS05920;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS05920;product=RNase P RNA component class B
NZ_LAEX01000006.1	RefSeq	gene	128061	129284	.	-	.	ID=gene-TS60_RS02780;Name=TS60_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02780;old_locus_tag=TS60_0585
NZ_LAEX01000006.1	Protein Homology	CDS	128061	129284	.	-	0	ID=cds-WP_011166603.1;Parent=gene-TS60_RS02780;Dbxref=GenBank:WP_011166603.1;Name=WP_011166603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862690.1;locus_tag=TS60_RS02780;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166603.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	129387	130844	.	-	.	ID=gene-TS60_RS02785;Name=TS60_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02785;old_locus_tag=TS60_0586
NZ_LAEX01000006.1	Protein Homology	CDS	129387	130844	.	-	0	ID=cds-WP_256122303.1;Parent=gene-TS60_RS02785;Dbxref=GenBank:WP_256122303.1;Name=WP_256122303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447853.1;locus_tag=TS60_RS02785;product=BspA family leucine-rich repeat surface protein;protein_id=WP_256122303.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	131012	131389	.	-	.	ID=gene-TS60_RS02790;Name=TS60_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02790;old_locus_tag=TS60_0587
NZ_LAEX01000006.1	Protein Homology	CDS	131012	131389	.	-	0	ID=cds-WP_015545535.1;Parent=gene-TS60_RS02790;Dbxref=GenBank:WP_015545535.1;Name=WP_015545535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447854.1;locus_tag=TS60_RS02790;product=DivIVA domain-containing protein;protein_id=WP_015545535.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	gene	131452	131907	.	+	.	ID=gene-TS60_RS02795;Name=TS60_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02795;old_locus_tag=TS60_0588
NZ_LAEX01000006.1	Protein Homology	CDS	131452	131907	.	+	0	ID=cds-WP_045596555.1;Parent=gene-TS60_RS02795;Dbxref=GenBank:WP_045596555.1;Name=WP_045596555.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447855.1;locus_tag=TS60_RS02795;product=Holliday junction resolvase RecU;protein_id=WP_045596555.1;transl_table=4
NZ_LAEX01000006.1	RefSeq	pseudogene	131904	132729	.	-	.	ID=gene-TS60_RS06545;Name=TS60_RS06545;end_range=132729,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06545;partial=true;pseudo=true
NZ_LAEX01000006.1	Protein Homology	CDS	131904	132729	.	-	2	ID=cds-TS60_RS06545;Parent=gene-TS60_RS06545;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=132729,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06545;partial=true;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
##sequence-region NZ_LAEX01000007.1 1 504069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000007.1	RefSeq	region	1	504069	.	+	.	ID=NZ_LAEX01000007.1:1..504069;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000007.1	RefSeq	pseudogene	1	1323	.	-	.	ID=gene-TS60_RS06550;Name=TS60_RS06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06550;partial=true;pseudo=true;start_range=.,1
NZ_LAEX01000007.1	Protein Homology	CDS	1	1323	.	-	0	ID=cds-TS60_RS06550;Parent=gene-TS60_RS06550;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06550;partial=true;product=IS3-like element IS1296 family transposase;pseudo=true;start_range=.,1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	1400	2578	.	-	.	ID=gene-TS60_RS02820;Name=TS60_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02820;old_locus_tag=TS60_0595
NZ_LAEX01000007.1	Protein Homology	CDS	1400	2578	.	-	0	ID=cds-WP_011166708.1;Parent=gene-TS60_RS02820;Dbxref=GenBank:WP_011166708.1;Name=WP_011166708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862771.1;locus_tag=TS60_RS02820;product=NADH-dependent flavin oxidoreductase;protein_id=WP_011166708.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	2578	3615	.	-	.	ID=gene-TS60_RS02825;Name=TS60_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02825;old_locus_tag=TS60_0596
NZ_LAEX01000007.1	Protein Homology	CDS	2578	3615	.	-	0	ID=cds-WP_011166709.1;Parent=gene-TS60_RS02825;Dbxref=GenBank:WP_011166709.1;Name=WP_011166709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166709.1;locus_tag=TS60_RS02825;product=lipoate--protein ligase;protein_id=WP_011166709.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	3593	4450	.	-	.	ID=gene-TS60_RS02830;Name=TS60_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02830;old_locus_tag=TS60_0597
NZ_LAEX01000007.1	Protein Homology	CDS	3593	4450	.	-	0	ID=cds-WP_011166710.1;Parent=gene-TS60_RS02830;Dbxref=GenBank:WP_011166710.1;Name=WP_011166710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697784.1;locus_tag=TS60_RS02830;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_011166710.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	4452	4796	.	-	.	ID=gene-TS60_RS02835;Name=TS60_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02835;old_locus_tag=TS60_0598
NZ_LAEX01000007.1	Protein Homology	CDS	4452	4796	.	-	0	ID=cds-WP_015545501.1;Parent=gene-TS60_RS02835;Dbxref=GenBank:WP_015545501.1;Name=WP_015545501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545501.1;locus_tag=TS60_RS02835;product=glycine cleavage system protein H;protein_id=WP_015545501.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	4983	5774	.	+	.	ID=gene-TS60_RS02840;Name=TS60_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02840;old_locus_tag=TS60_0599
NZ_LAEX01000007.1	Protein Homology	CDS	4983	5774	.	+	0	ID=cds-WP_011166712.1;Parent=gene-TS60_RS02840;Dbxref=GenBank:WP_011166712.1;Name=WP_011166712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166712.1;locus_tag=TS60_RS02840;product=alpha/beta fold hydrolase;protein_id=WP_011166712.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	5777	6577	.	+	.	ID=gene-TS60_RS02845;Name=TS60_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02845;old_locus_tag=TS60_0600
NZ_LAEX01000007.1	Protein Homology	CDS	5777	6577	.	+	0	ID=cds-WP_011166713.1;Parent=gene-TS60_RS02845;Dbxref=GenBank:WP_011166713.1;Name=WP_011166713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447745.1;locus_tag=TS60_RS02845;product=alpha/beta fold hydrolase;protein_id=WP_011166713.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	6801	7757	.	-	.	ID=gene-TS60_RS02850;Name=TS60_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02850;old_locus_tag=TS60_0601
NZ_LAEX01000007.1	Protein Homology	CDS	6801	7757	.	-	0	ID=cds-WP_011166714.1;Parent=gene-TS60_RS02850;Dbxref=GenBank:WP_011166714.1;Name=WP_011166714.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862782.1;locus_tag=TS60_RS02850;product=L-lactate dehydrogenase;protein_id=WP_011166714.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	7809	8966	.	-	.	ID=gene-TS60_RS02855;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=TS60_RS02855;old_locus_tag=TS60_0602
NZ_LAEX01000007.1	Protein Homology	CDS	7809	8966	.	-	0	ID=cds-WP_015545643.1;Parent=gene-TS60_RS02855;Dbxref=GenBank:WP_015545643.1;Name=WP_015545643.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269430.1;locus_tag=TS60_RS02855;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_015545643.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	9060	9869	.	+	.	ID=gene-TS60_RS02860;Name=TS60_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02860;old_locus_tag=TS60_0603
NZ_LAEX01000007.1	Protein Homology	CDS	9060	9869	.	+	0	ID=cds-WP_011166716.1;Parent=gene-TS60_RS02860;Dbxref=GenBank:WP_011166716.1;Name=WP_011166716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447742.1;locus_tag=TS60_RS02860;product=hypothetical protein;protein_id=WP_011166716.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	9881	10465	.	-	.	ID=gene-TS60_RS02865;Name=TS60_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02865;old_locus_tag=TS60_0604
NZ_LAEX01000007.1	Protein Homology	CDS	9881	10465	.	-	0	ID=cds-WP_011166717.1;Parent=gene-TS60_RS02865;Dbxref=GenBank:WP_011166717.1;Name=WP_011166717.1;Ontology_term=GO:0006810,GO:0015075;gbkey=CDS;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862785.1;locus_tag=TS60_RS02865;product=MFS transporter;protein_id=WP_011166717.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	10470	12116	.	-	.	ID=gene-TS60_RS07015;Name=TS60_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07015;old_locus_tag=TS60_0605
NZ_LAEX01000007.1	Protein Homology	CDS	10470	12116	.	-	0	ID=cds-WP_045596565.1;Parent=gene-TS60_RS07015;Dbxref=GenBank:WP_045596565.1;Name=WP_045596565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545331.1;locus_tag=TS60_RS07015;product=hypothetical protein;protein_id=WP_045596565.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	12268	12393	.	+	.	ID=gene-TS60_RS07700;Name=TS60_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07700;old_locus_tag=TS60_0606
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	12268	12393	.	+	0	ID=cds-WP_015545621.1;Parent=gene-TS60_RS07700;Dbxref=GenBank:WP_015545621.1;Name=WP_015545621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07700;product=hypothetical protein;protein_id=WP_015545621.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	12463	14136	.	-	.	ID=gene-TS60_RS02875;Name=TS60_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02875;old_locus_tag=TS60_0607
NZ_LAEX01000007.1	Protein Homology	CDS	12463	14136	.	-	0	ID=cds-WP_039275537.1;Parent=gene-TS60_RS02875;Dbxref=GenBank:WP_039275537.1;Name=WP_039275537.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02875;product=IS1634-like element IS1634 family transposase;protein_id=WP_039275537.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	14375	16201	.	+	.	ID=gene-TS60_RS02880;Name=TS60_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02880;old_locus_tag=TS60_0608
NZ_LAEX01000007.1	Protein Homology	CDS	14375	16201	.	+	0	ID=cds-WP_011166721.1;Parent=gene-TS60_RS02880;Dbxref=GenBank:WP_011166721.1;Name=WP_011166721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729641.1;locus_tag=TS60_RS02880;product=hypothetical protein;protein_id=WP_011166721.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	16250	16789	.	-	.	ID=gene-TS60_RS02885;Name=TS60_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02885;old_locus_tag=TS60_0609
NZ_LAEX01000007.1	Protein Homology	CDS	16250	16789	.	-	0	ID=cds-WP_011166722.1;Parent=gene-TS60_RS02885;Dbxref=GenBank:WP_011166722.1;Name=WP_011166722.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166722.1;locus_tag=TS60_RS02885;product=lipoprotein;protein_id=WP_011166722.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	17068	17232	.	+	.	ID=gene-TS60_RS02890;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=TS60_RS02890;old_locus_tag=TS60_0610
NZ_LAEX01000007.1	Protein Homology	CDS	17068	17232	.	+	0	ID=cds-WP_008362785.1;Parent=gene-TS60_RS02890;Dbxref=GenBank:WP_008362785.1;Name=WP_008362785.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362785.1;locus_tag=TS60_RS02890;product=30S ribosomal protein S21;protein_id=WP_008362785.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	17340	17900	.	+	.	ID=gene-TS60_RS02895;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=TS60_RS02895;old_locus_tag=TS60_0611
NZ_LAEX01000007.1	Protein Homology	CDS	17340	17900	.	+	0	ID=cds-WP_011166724.1;Parent=gene-TS60_RS02895;Dbxref=GenBank:WP_011166724.1;Name=WP_011166724.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166724.1;locus_tag=TS60_RS02895;product=Holliday junction branch migration protein RuvA;protein_id=WP_011166724.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	17917	18840	.	+	.	ID=gene-TS60_RS02900;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=TS60_RS02900;old_locus_tag=TS60_0612
NZ_LAEX01000007.1	Protein Homology	CDS	17917	18840	.	+	0	ID=cds-WP_011166725.1;Parent=gene-TS60_RS02900;Dbxref=GenBank:WP_011166725.1;Name=WP_011166725.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729645.1;locus_tag=TS60_RS02900;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_011166725.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	18918	20276	.	+	.	ID=gene-TS60_RS02905;Name=TS60_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02905;old_locus_tag=TS60_0613
NZ_LAEX01000007.1	Protein Homology	CDS	18918	20276	.	+	0	ID=cds-WP_011166726.1;Parent=gene-TS60_RS02905;Dbxref=GenBank:WP_011166726.1;Name=WP_011166726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697765.1;locus_tag=TS60_RS02905;product=dihydrolipoyl dehydrogenase;protein_id=WP_011166726.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	20292	20429	.	-	.	ID=gene-TS60_RS07405;Name=TS60_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07405;old_locus_tag=TS60_0614
NZ_LAEX01000007.1	Protein Homology	CDS	20292	20429	.	-	0	ID=cds-WP_011166727.1;Parent=gene-TS60_RS07405;Dbxref=GenBank:WP_011166727.1;Name=WP_011166727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166727.1;locus_tag=TS60_RS07405;product=hypothetical protein;protein_id=WP_011166727.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	20483	21064	.	-	.	ID=gene-TS60_RS02910;Name=TS60_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02910;old_locus_tag=TS60_0615
NZ_LAEX01000007.1	Protein Homology	CDS	20483	21064	.	-	0	ID=cds-WP_011166728.1;Parent=gene-TS60_RS02910;Dbxref=GenBank:WP_011166728.1;Name=WP_011166728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166728.1;locus_tag=TS60_RS02910;product=hypothetical protein;protein_id=WP_011166728.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	21175	22095	.	+	.	ID=gene-TS60_RS02915;Name=TS60_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02915;old_locus_tag=TS60_0616
NZ_LAEX01000007.1	Protein Homology	CDS	21175	22095	.	+	0	ID=cds-WP_015545344.1;Parent=gene-TS60_RS02915;Dbxref=GenBank:WP_015545344.1;Name=WP_015545344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862792.1;locus_tag=TS60_RS02915;product=hypothetical protein;protein_id=WP_015545344.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	22104	23207	.	+	.	ID=gene-TS60_RS02920;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=TS60_RS02920;old_locus_tag=TS60_0617
NZ_LAEX01000007.1	Protein Homology	CDS	22104	23207	.	+	0	ID=cds-WP_011166730.1;Parent=gene-TS60_RS02920;Dbxref=GenBank:WP_011166730.1;Name=WP_011166730.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166730.1;locus_tag=TS60_RS02920;product=ribosome biogenesis GTPase YqeH;protein_id=WP_011166730.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	23230	24437	.	-	.	ID=gene-TS60_RS02925;Name=TS60_RS02925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS02925;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	23230	24437	.	-	0	ID=cds-TS60_RS02925;Parent=gene-TS60_RS02925;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166731.1;locus_tag=TS60_RS02925;product=Y-family DNA polymerase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	24585	25550	.	+	.	ID=gene-TS60_RS07410;Name=TS60_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07410;old_locus_tag=TS60_0620
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	24585	25550	.	+	0	ID=cds-WP_236252327.1;Parent=gene-TS60_RS07410;Dbxref=GenBank:WP_236252327.1;Name=WP_236252327.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07410;product=C1 family peptidase;protein_id=WP_236252327.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	25531	27330	.	+	.	ID=gene-TS60_RS02930;Name=TS60_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02930;old_locus_tag=TS60_0621
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	25531	27330	.	+	0	ID=cds-WP_236252328.1;Parent=gene-TS60_RS02930;Dbxref=GenBank:WP_236252328.1;Name=WP_236252328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS02930;product=hypothetical protein;protein_id=WP_236252328.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	27471	29144	.	-	.	ID=gene-TS60_RS02935;Name=TS60_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02935;old_locus_tag=TS60_0622
NZ_LAEX01000007.1	Protein Homology	CDS	27471	29144	.	-	0	ID=cds-WP_015545453.1;Parent=gene-TS60_RS02935;Dbxref=GenBank:WP_015545453.1;Name=WP_015545453.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS02935;product=IS1634-like element IS1634 family transposase;protein_id=WP_015545453.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	29359	29976	.	-	.	ID=gene-TS60_RS02940;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=TS60_RS02940;old_locus_tag=TS60_0623
NZ_LAEX01000007.1	Protein Homology	CDS	29359	29976	.	-	0	ID=cds-WP_011166734.1;Parent=gene-TS60_RS02940;Dbxref=GenBank:WP_011166734.1;Name=WP_011166734.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447728.1;locus_tag=TS60_RS02940;product=uridine kinase;protein_id=WP_011166734.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	30000	30440	.	-	.	ID=gene-TS60_RS02945;Name=TS60_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02945;old_locus_tag=TS60_0624
NZ_LAEX01000007.1	Protein Homology	CDS	30000	30440	.	-	0	ID=cds-WP_011166735.1;Parent=gene-TS60_RS02945;Dbxref=GenBank:WP_011166735.1;Name=WP_011166735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862796.1;locus_tag=TS60_RS02945;product=hypothetical protein;protein_id=WP_011166735.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	30513	31862	.	-	.	ID=gene-TS60_RS02950;Name=TS60_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02950;old_locus_tag=TS60_0625
NZ_LAEX01000007.1	Protein Homology	CDS	30513	31862	.	-	0	ID=cds-WP_015545333.1;Parent=gene-TS60_RS02950;Dbxref=GenBank:WP_015545333.1;Name=WP_015545333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387295.1;locus_tag=TS60_RS02950;product=M20 family metallopeptidase;protein_id=WP_015545333.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	32018	32698	.	-	.	ID=gene-TS60_RS02955;Name=TS60_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02955;old_locus_tag=TS60_0626
NZ_LAEX01000007.1	Protein Homology	CDS	32018	32698	.	-	0	ID=cds-WP_011166737.1;Parent=gene-TS60_RS02955;Dbxref=GenBank:WP_011166737.1;Name=WP_011166737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729654.1;locus_tag=TS60_RS02955;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_011166737.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	32757	33632	.	-	.	ID=gene-TS60_RS02960;Name=TS60_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02960;old_locus_tag=TS60_0627
NZ_LAEX01000007.1	Protein Homology	CDS	32757	33632	.	-	0	ID=cds-WP_011166738.1;Parent=gene-TS60_RS02960;Dbxref=GenBank:WP_011166738.1;Name=WP_011166738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697726.1;locus_tag=TS60_RS02960;product=ROK family protein;protein_id=WP_011166738.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	33671	34072	.	-	.	ID=gene-TS60_RS02965;Name=TS60_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02965;old_locus_tag=TS60_0628
NZ_LAEX01000007.1	Protein Homology	CDS	33671	34072	.	-	0	ID=cds-WP_011166739.1;Parent=gene-TS60_RS02965;Dbxref=GenBank:WP_011166739.1;Name=WP_011166739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166739.1;locus_tag=TS60_RS02965;product=YhcH/YjgK/YiaL family protein;protein_id=WP_011166739.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	34081	35784	.	-	.	ID=gene-TS60_RS02970;Name=TS60_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02970;old_locus_tag=TS60_0629
NZ_LAEX01000007.1	Protein Homology	CDS	34081	35784	.	-	0	ID=cds-WP_011166740.1;Parent=gene-TS60_RS02970;Dbxref=GenBank:WP_011166740.1;Name=WP_011166740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697728.1;locus_tag=TS60_RS02970;product=sodium:solute symporter;protein_id=WP_011166740.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	35786	36673	.	-	.	ID=gene-TS60_RS02975;Name=TS60_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02975;old_locus_tag=TS60_0630
NZ_LAEX01000007.1	Protein Homology	CDS	35786	36673	.	-	0	ID=cds-WP_011166741.1;Parent=gene-TS60_RS02975;Dbxref=GenBank:WP_011166741.1;Name=WP_011166741.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862801.1;locus_tag=TS60_RS02975;product=N-acetylneuraminate lyase;protein_id=WP_011166741.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	36837	37118	.	-	.	ID=gene-TS60_RS02980;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=TS60_RS02980;old_locus_tag=TS60_0631
NZ_LAEX01000007.1	Protein Homology	CDS	36837	37118	.	-	0	ID=cds-WP_008362816.1;Parent=gene-TS60_RS02980;Dbxref=GenBank:WP_008362816.1;Name=WP_008362816.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387289.1;locus_tag=TS60_RS02980;product=50S ribosomal protein L27;protein_id=WP_008362816.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	37120	37434	.	-	.	ID=gene-TS60_RS02985;Name=TS60_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02985;old_locus_tag=TS60_0632
NZ_LAEX01000007.1	Protein Homology	CDS	37120	37434	.	-	0	ID=cds-WP_011166742.1;Parent=gene-TS60_RS02985;Dbxref=GenBank:WP_011166742.1;Name=WP_011166742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362817.1;locus_tag=TS60_RS02985;product=ribosomal-processing cysteine protease Prp;protein_id=WP_011166742.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	37437	37739	.	-	.	ID=gene-TS60_RS02990;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=TS60_RS02990;old_locus_tag=TS60_0633
NZ_LAEX01000007.1	Protein Homology	CDS	37437	37739	.	-	0	ID=cds-WP_011166743.1;Parent=gene-TS60_RS02990;Dbxref=GenBank:WP_011166743.1;Name=WP_011166743.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387287.1;locus_tag=TS60_RS02990;product=50S ribosomal protein L21;protein_id=WP_011166743.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	37883	38284	.	-	.	ID=gene-TS60_RS02995;Name=TS60_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS02995;old_locus_tag=TS60_0634
NZ_LAEX01000007.1	Protein Homology	CDS	37883	38284	.	-	0	ID=cds-WP_015545405.1;Parent=gene-TS60_RS02995;Dbxref=GenBank:WP_015545405.1;Name=WP_015545405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697730.1;locus_tag=TS60_RS02995;product=hypothetical protein;protein_id=WP_015545405.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	38307	39194	.	-	.	ID=gene-TS60_RS03000;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=TS60_RS03000;old_locus_tag=TS60_0635
NZ_LAEX01000007.1	Protein Homology	CDS	38307	39194	.	-	0	ID=cds-WP_011166745.1;Parent=gene-TS60_RS03000;Dbxref=GenBank:WP_011166745.1;Name=WP_011166745.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862803.1;locus_tag=TS60_RS03000;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_011166745.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	39254	39397	.	-	.	ID=gene-TS60_RS03005;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=TS60_RS03005;old_locus_tag=TS60_0636
NZ_LAEX01000007.1	Protein Homology	CDS	39254	39397	.	-	0	ID=cds-WP_013729662.1;Parent=gene-TS60_RS03005;Dbxref=GenBank:WP_013729662.1;Name=WP_013729662.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183279.1;locus_tag=TS60_RS03005;product=50S ribosomal protein L33;protein_id=WP_013729662.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	39740	41123	.	-	.	ID=gene-TS60_RS06565;Name=TS60_RS06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06565;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	39740	41123	.	-	0	ID=cds-TS60_RS06565;Parent=gene-TS60_RS06565;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06565;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	41242	42918	.	+	.	ID=gene-TS60_RS03025;Name=TS60_RS03025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS03025;old_locus_tag=TS60_0640;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	41242	42918	.	+	0	ID=cds-TS60_RS03025;Parent=gene-TS60_RS03025;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03025;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	43153	43518	.	-	.	ID=gene-TS60_RS03030;Name=TS60_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03030;old_locus_tag=TS60_0642
NZ_LAEX01000007.1	Protein Homology	CDS	43153	43518	.	-	0	ID=cds-WP_011166746.1;Parent=gene-TS60_RS03030;Dbxref=GenBank:WP_011166746.1;Name=WP_011166746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166746.1;locus_tag=TS60_RS03030;product=hypothetical protein;protein_id=WP_011166746.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	43853	44527	.	-	.	ID=gene-TS60_RS03035;Name=TS60_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03035;old_locus_tag=TS60_0643
NZ_LAEX01000007.1	Protein Homology	CDS	43853	44527	.	-	0	ID=cds-WP_011166748.1;Parent=gene-TS60_RS03035;Dbxref=GenBank:WP_011166748.1;Name=WP_011166748.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166748.1;locus_tag=TS60_RS03035;product=lipoprotein;protein_id=WP_011166748.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	44624	46036	.	-	.	ID=gene-TS60_RS03040;Name=TS60_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03040;old_locus_tag=TS60_0644
NZ_LAEX01000007.1	Protein Homology	CDS	44624	46036	.	-	0	ID=cds-WP_011166749.1;Parent=gene-TS60_RS03040;Dbxref=GenBank:WP_011166749.1;Name=WP_011166749.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS03040;product=IS1634-like element ISMmy1 family transposase;protein_id=WP_011166749.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	47084	47776	.	-	.	ID=gene-TS60_RS03045;Name=TS60_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03045;old_locus_tag=TS60_0645
NZ_LAEX01000007.1	Protein Homology	CDS	47084	47776	.	-	0	ID=cds-WP_011166751.1;Parent=gene-TS60_RS03045;Dbxref=GenBank:WP_011166751.1;Name=WP_011166751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166751.1;locus_tag=TS60_RS03045;product=hypothetical protein;protein_id=WP_011166751.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	47803	48519	.	-	.	ID=gene-TS60_RS03050;Name=TS60_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03050;old_locus_tag=TS60_0646
NZ_LAEX01000007.1	Protein Homology	CDS	47803	48519	.	-	0	ID=cds-WP_011166752.1;Parent=gene-TS60_RS03050;Dbxref=GenBank:WP_011166752.1;Name=WP_011166752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166752.1;locus_tag=TS60_RS03050;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166752.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	49028	49300	.	+	.	ID=gene-TS60_RS06890;Name=TS60_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06890;old_locus_tag=TS60_0647
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	49028	49300	.	+	0	ID=cds-WP_015545565.1;Parent=gene-TS60_RS06890;Dbxref=GenBank:WP_015545565.1;Name=WP_015545565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS06890;product=hypothetical protein;protein_id=WP_015545565.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	49646	50671	.	+	.	ID=gene-TS60_RS03060;Name=TS60_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03060;old_locus_tag=TS60_0648
NZ_LAEX01000007.1	Protein Homology	CDS	49646	50671	.	+	0	ID=cds-WP_011166753.1;Parent=gene-TS60_RS03060;Dbxref=GenBank:WP_011166753.1;Name=WP_011166753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166753.1;locus_tag=TS60_RS03060;product=hypothetical protein;protein_id=WP_011166753.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	50770	50858	.	-	.	ID=gene-TS60_RS03065;Name=TS60_RS03065;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03065;old_locus_tag=TS60_0649
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	50770	50858	.	-	.	ID=rna-TS60_RS03065;Parent=gene-TS60_RS03065;anticodon=(pos:complement(50822..50824));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03065;product=tRNA-Leu
NZ_LAEX01000007.1	tRNAscan-SE	exon	50770	50858	.	-	.	ID=exon-TS60_RS03065-1;Parent=rna-TS60_RS03065;anticodon=(pos:complement(50822..50824));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03065;product=tRNA-Leu
NZ_LAEX01000007.1	RefSeq	gene	50869	50944	.	-	.	ID=gene-TS60_RS03070;Name=TS60_RS03070;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03070;old_locus_tag=TS60_0650
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	50869	50944	.	-	.	ID=rna-TS60_RS03070;Parent=gene-TS60_RS03070;anticodon=(pos:complement(50909..50911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03070;product=tRNA-Lys
NZ_LAEX01000007.1	tRNAscan-SE	exon	50869	50944	.	-	.	ID=exon-TS60_RS03070-1;Parent=rna-TS60_RS03070;anticodon=(pos:complement(50909..50911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03070;product=tRNA-Lys
NZ_LAEX01000007.1	RefSeq	gene	50949	51023	.	-	.	ID=gene-TS60_RS03075;Name=TS60_RS03075;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03075;old_locus_tag=TS60_0651
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	50949	51023	.	-	.	ID=rna-TS60_RS03075;Parent=gene-TS60_RS03075;anticodon=(pos:complement(50989..50991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03075;product=tRNA-Gln
NZ_LAEX01000007.1	tRNAscan-SE	exon	50949	51023	.	-	.	ID=exon-TS60_RS03075-1;Parent=rna-TS60_RS03075;anticodon=(pos:complement(50989..50991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03075;product=tRNA-Gln
NZ_LAEX01000007.1	RefSeq	gene	51031	51114	.	-	.	ID=gene-TS60_RS03080;Name=TS60_RS03080;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03080;old_locus_tag=TS60_0652
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	51031	51114	.	-	.	ID=rna-TS60_RS03080;Parent=gene-TS60_RS03080;anticodon=(pos:complement(51078..51080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03080;product=tRNA-Tyr
NZ_LAEX01000007.1	tRNAscan-SE	exon	51031	51114	.	-	.	ID=exon-TS60_RS03080-1;Parent=rna-TS60_RS03080;anticodon=(pos:complement(51078..51080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03080;product=tRNA-Tyr
NZ_LAEX01000007.1	RefSeq	gene	51121	51196	.	-	.	ID=gene-TS60_RS03085;Name=TS60_RS03085;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03085;old_locus_tag=TS60_0653
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	51121	51196	.	-	.	ID=rna-TS60_RS03085;Parent=gene-TS60_RS03085;anticodon=(pos:complement(51161..51163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03085;product=tRNA-Thr
NZ_LAEX01000007.1	tRNAscan-SE	exon	51121	51196	.	-	.	ID=exon-TS60_RS03085-1;Parent=rna-TS60_RS03085;anticodon=(pos:complement(51161..51163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03085;product=tRNA-Thr
NZ_LAEX01000007.1	RefSeq	gene	51322	51945	.	-	.	ID=gene-TS60_RS03090;Name=TS60_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03090;old_locus_tag=TS60_0654
NZ_LAEX01000007.1	Protein Homology	CDS	51322	51945	.	-	0	ID=cds-WP_011166754.1;Parent=gene-TS60_RS03090;Dbxref=GenBank:WP_011166754.1;Name=WP_011166754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862805.1;locus_tag=TS60_RS03090;product=hypothetical protein;protein_id=WP_011166754.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	51994	52932	.	-	.	ID=gene-TS60_RS03095;Name=TS60_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03095;old_locus_tag=TS60_0655
NZ_LAEX01000007.1	Protein Homology	CDS	51994	52932	.	-	0	ID=cds-WP_015545553.1;Parent=gene-TS60_RS03095;Dbxref=GenBank:WP_015545553.1;Name=WP_015545553.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545553.1;locus_tag=TS60_RS03095;product=lysophospholipid acyltransferase family protein;protein_id=WP_015545553.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	53128	53460	.	-	.	ID=gene-TS60_RS03100;Name=TS60_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03100;old_locus_tag=TS60_0656
NZ_LAEX01000007.1	Protein Homology	CDS	53128	53460	.	-	0	ID=cds-WP_011166756.1;Parent=gene-TS60_RS03100;Dbxref=GenBank:WP_011166756.1;Name=WP_011166756.1;Ontology_term=GO:0006633,GO:0000287,GO:0008897,GO:0016740;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166756.1;locus_tag=TS60_RS03100;product=holo-ACP synthase;protein_id=WP_011166756.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	54359	54529	.	-	.	ID=gene-TS60_RS07415;Name=TS60_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07415;old_locus_tag=TS60_0657
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	54359	54529	.	-	0	ID=cds-WP_011166758.1;Parent=gene-TS60_RS07415;Dbxref=GenBank:WP_011166758.1;Name=WP_011166758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07415;product=hypothetical protein;protein_id=WP_011166758.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	54603	55085	.	-	.	ID=gene-TS60_RS03110;Name=TS60_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03110;old_locus_tag=TS60_0658
NZ_LAEX01000007.1	Protein Homology	CDS	54603	55085	.	-	0	ID=cds-WP_011166759.1;Parent=gene-TS60_RS03110;Dbxref=GenBank:WP_011166759.1;Name=WP_011166759.1;Ontology_term=GO:0006220,GO:0009972,GO:0004132,GO:0008270;gbkey=CDS;go_function=dCMP deaminase activity|0004132||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine nucleotide metabolic process|0006220||IEA,obsolete cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362837.1;locus_tag=TS60_RS03110;product=deoxycytidylate deaminase;protein_id=WP_011166759.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	55088	56389	.	-	.	ID=gene-TS60_RS03115;Name=TS60_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03115;old_locus_tag=TS60_0659
NZ_LAEX01000007.1	Protein Homology	CDS	55088	56389	.	-	0	ID=cds-WP_039275688.1;Parent=gene-TS60_RS03115;Dbxref=GenBank:WP_039275688.1;Name=WP_039275688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862808.1;locus_tag=TS60_RS03115;product=hypothetical protein;protein_id=WP_039275688.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	56382	57314	.	-	.	ID=gene-TS60_RS03120;Name=TS60_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03120;old_locus_tag=TS60_0660
NZ_LAEX01000007.1	Protein Homology	CDS	56382	57314	.	-	0	ID=cds-WP_011166761.1;Parent=gene-TS60_RS03120;Dbxref=GenBank:WP_011166761.1;Name=WP_011166761.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862809.1;locus_tag=TS60_RS03120;product=RluA family pseudouridine synthase;protein_id=WP_011166761.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	57295	57903	.	-	.	ID=gene-TS60_RS03125;Name=TS60_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03125;old_locus_tag=TS60_0661
NZ_LAEX01000007.1	Protein Homology	CDS	57295	57903	.	-	0	ID=cds-WP_011166762.1;Parent=gene-TS60_RS03125;Dbxref=GenBank:WP_011166762.1;Name=WP_011166762.1;Ontology_term=GO:0006508,GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862810.1;locus_tag=TS60_RS03125;product=signal peptidase II;protein_id=WP_011166762.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	57894	60641	.	-	.	ID=gene-TS60_RS03130;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=TS60_RS03130;old_locus_tag=TS60_0662
NZ_LAEX01000007.1	Protein Homology	CDS	57894	60641	.	-	0	ID=cds-WP_045596573.1;Parent=gene-TS60_RS03130;Dbxref=GenBank:WP_045596573.1;Name=WP_045596573.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863092.1;locus_tag=TS60_RS03130;product=isoleucine--tRNA ligase;protein_id=WP_045596573.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	61392	62381	.	-	.	ID=gene-TS60_RS03135;Name=TS60_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03135;old_locus_tag=TS60_0663
NZ_LAEX01000007.1	Protein Homology	CDS	61392	62381	.	-	0	ID=cds-WP_011166764.1;Parent=gene-TS60_RS03135;Dbxref=GenBank:WP_011166764.1;Name=WP_011166764.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166764.1;locus_tag=TS60_RS03135;product=alpha/beta hydrolase;protein_id=WP_011166764.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	62394	62810	.	-	.	ID=gene-TS60_RS03140;Name=TS60_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03140;old_locus_tag=TS60_0664
NZ_LAEX01000007.1	Protein Homology	CDS	62394	62810	.	-	0	ID=cds-WP_011166765.1;Parent=gene-TS60_RS03140;Dbxref=GenBank:WP_011166765.1;Name=WP_011166765.1;Ontology_term=GO:0000917,GO:0043093;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862813.1;locus_tag=TS60_RS03140;product=cell division protein SepF;protein_id=WP_011166765.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	62822	63982	.	-	.	ID=gene-TS60_RS03145;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=TS60_RS03145;old_locus_tag=TS60_0665
NZ_LAEX01000007.1	Protein Homology	CDS	62822	63982	.	-	0	ID=cds-WP_011166766.1;Parent=gene-TS60_RS03145;Dbxref=GenBank:WP_011166766.1;Name=WP_011166766.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729674.1;locus_tag=TS60_RS03145;product=cell division protein FtsZ;protein_id=WP_011166766.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	64037	65257	.	-	.	ID=gene-TS60_RS03150;Name=TS60_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03150;old_locus_tag=TS60_0666
NZ_LAEX01000007.1	Protein Homology	CDS	64037	65257	.	-	0	ID=cds-WP_045596691.1;Parent=gene-TS60_RS03150;Dbxref=GenBank:WP_045596691.1;Name=WP_045596691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545441.1;locus_tag=TS60_RS03150;product=hypothetical protein;protein_id=WP_045596691.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	65266	66192	.	-	.	ID=gene-TS60_RS03155;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=TS60_RS03155;old_locus_tag=TS60_0667
NZ_LAEX01000007.1	Protein Homology	CDS	65266	66192	.	-	0	ID=cds-WP_011166769.1;Parent=gene-TS60_RS03155;Dbxref=GenBank:WP_011166769.1;Name=WP_011166769.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862815.1;locus_tag=TS60_RS03155;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_011166769.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	66201	66602	.	-	.	ID=gene-TS60_RS03160;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=TS60_RS03160;old_locus_tag=TS60_0668
NZ_LAEX01000007.1	Protein Homology	CDS	66201	66602	.	-	0	ID=cds-WP_011166770.1;Parent=gene-TS60_RS03160;Dbxref=GenBank:WP_011166770.1;Name=WP_011166770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166770.1;locus_tag=TS60_RS03160;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_011166770.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	66709	66888	.	-	.	ID=gene-TS60_RS03165;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=TS60_RS03165;old_locus_tag=TS60_0669
NZ_LAEX01000007.1	Protein Homology	CDS	66709	66888	.	-	0	ID=cds-WP_008362864.1;Parent=gene-TS60_RS03165;Dbxref=GenBank:WP_008362864.1;Name=WP_008362864.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362864.1;locus_tag=TS60_RS03165;product=50S ribosomal protein L32;protein_id=WP_008362864.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	66903	67421	.	-	.	ID=gene-TS60_RS03170;Name=TS60_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03170;old_locus_tag=TS60_0670
NZ_LAEX01000007.1	Protein Homology	CDS	66903	67421	.	-	0	ID=cds-WP_011166771.1;Parent=gene-TS60_RS03170;Dbxref=GenBank:WP_011166771.1;Name=WP_011166771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862817.1;locus_tag=TS60_RS03170;product=YceD family protein;protein_id=WP_011166771.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	67421	69805	.	-	.	ID=gene-TS60_RS03175;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=TS60_RS03175;old_locus_tag=TS60_0671
NZ_LAEX01000007.1	Protein Homology	CDS	67421	69805	.	-	0	ID=cds-WP_011166772.1;Parent=gene-TS60_RS03175;Dbxref=GenBank:WP_011166772.1;Name=WP_011166772.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729679.1;locus_tag=TS60_RS03175;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011166772.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	69814	70866	.	-	.	ID=gene-TS60_RS03180;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=TS60_RS03180;old_locus_tag=TS60_0672
NZ_LAEX01000007.1	Protein Homology	CDS	69814	70866	.	-	0	ID=cds-WP_015545258.1;Parent=gene-TS60_RS03180;Dbxref=GenBank:WP_015545258.1;Name=WP_015545258.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697747.1;locus_tag=TS60_RS03180;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_015545258.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	70895	71503	.	-	.	ID=gene-TS60_RS03185;Name=TS60_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03185;old_locus_tag=TS60_0673
NZ_LAEX01000007.1	Protein Homology	CDS	70895	71503	.	-	0	ID=cds-WP_011166774.1;Parent=gene-TS60_RS03185;Dbxref=GenBank:WP_011166774.1;Name=WP_011166774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729681.1;locus_tag=TS60_RS03185;product=hypothetical protein;protein_id=WP_011166774.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	71512	75960	.	-	.	ID=gene-TS60_RS03190;Name=TS60_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03190;old_locus_tag=TS60_0674
NZ_LAEX01000007.1	Protein Homology	CDS	71512	75960	.	-	0	ID=cds-WP_015545577.1;Parent=gene-TS60_RS03190;Dbxref=GenBank:WP_015545577.1;Name=WP_015545577.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862821.1;locus_tag=TS60_RS03190;product=ABC transporter permease;protein_id=WP_015545577.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	76079	76187	.	-	.	ID=gene-TS60_RS03195;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=TS60_RS03195;old_locus_tag=TS60_0675
NZ_LAEX01000007.1	cmsearch	rRNA	76079	76187	.	-	.	ID=rna-TS60_RS03195;Parent=gene-TS60_RS03195;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS03195;product=5S ribosomal RNA
NZ_LAEX01000007.1	cmsearch	exon	76079	76187	.	-	.	ID=exon-TS60_RS03195-1;Parent=rna-TS60_RS03195;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS03195;product=5S ribosomal RNA
NZ_LAEX01000007.1	RefSeq	gene	76250	79160	.	-	.	ID=gene-TS60_RS03200;Name=TS60_RS03200;gbkey=Gene;gene_biotype=rRNA;locus_tag=TS60_RS03200;old_locus_tag=TS60_0676
NZ_LAEX01000007.1	cmsearch	rRNA	76250	79160	.	-	.	ID=rna-TS60_RS03200;Parent=gene-TS60_RS03200;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS03200;product=23S ribosomal RNA
NZ_LAEX01000007.1	cmsearch	exon	76250	79160	.	-	.	ID=exon-TS60_RS03200-1;Parent=rna-TS60_RS03200;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS03200;product=23S ribosomal RNA
NZ_LAEX01000007.1	RefSeq	gene	79388	80909	.	-	.	ID=gene-TS60_RS03205;Name=TS60_RS03205;gbkey=Gene;gene_biotype=rRNA;locus_tag=TS60_RS03205;old_locus_tag=TS60_0677
NZ_LAEX01000007.1	cmsearch	rRNA	79388	80909	.	-	.	ID=rna-TS60_RS03205;Parent=gene-TS60_RS03205;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS03205;product=16S ribosomal RNA
NZ_LAEX01000007.1	cmsearch	exon	79388	80909	.	-	.	ID=exon-TS60_RS03205-1;Parent=rna-TS60_RS03205;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=TS60_RS03205;product=16S ribosomal RNA
NZ_LAEX01000007.1	RefSeq	gene	81124	82788	.	-	.	ID=gene-TS60_RS03210;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=TS60_RS03210;old_locus_tag=TS60_0678
NZ_LAEX01000007.1	Protein Homology	CDS	81124	82788	.	-	0	ID=cds-WP_011166776.1;Parent=gene-TS60_RS03210;Dbxref=GenBank:WP_011166776.1;Name=WP_011166776.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387261.1;locus_tag=TS60_RS03210;product=arginine--tRNA ligase;protein_id=WP_011166776.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	82790	83338	.	-	.	ID=gene-TS60_RS03215;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=TS60_RS03215;old_locus_tag=TS60_0679
NZ_LAEX01000007.1	Protein Homology	CDS	82790	83338	.	-	0	ID=cds-WP_011166777.1;Parent=gene-TS60_RS03215;Dbxref=GenBank:WP_011166777.1;Name=WP_011166777.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862823.1;locus_tag=TS60_RS03215;product=ribosome recycling factor;protein_id=WP_011166777.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	83349	84062	.	-	.	ID=gene-TS60_RS03220;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=TS60_RS03220;old_locus_tag=TS60_0680
NZ_LAEX01000007.1	Protein Homology	CDS	83349	84062	.	-	0	ID=cds-WP_015545348.1;Parent=gene-TS60_RS03220;Dbxref=GenBank:WP_015545348.1;Name=WP_015545348.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362997.1;locus_tag=TS60_RS03220;product=UMP kinase;protein_id=WP_015545348.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	84451	86124	.	+	.	ID=gene-TS60_RS03230;Name=TS60_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03230;old_locus_tag=TS60_0681
NZ_LAEX01000007.1	Protein Homology	CDS	84451	86124	.	+	0	ID=cds-WP_045596577.1;Parent=gene-TS60_RS03230;Dbxref=GenBank:WP_045596577.1;Name=WP_045596577.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03230;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596577.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	86360	86776	.	+	.	ID=gene-TS60_RS07420;Name=TS60_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07420;old_locus_tag=TS60_0682
NZ_LAEX01000007.1	Protein Homology	CDS	86360	86776	.	+	0	ID=cds-WP_015545584.1;Parent=gene-TS60_RS07420;Dbxref=GenBank:WP_015545584.1;Name=WP_015545584.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.6;locus_tag=TS60_RS07420;product=helix-turn-helix domain-containing protein;protein_id=WP_015545584.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	87198	87353	.	+	.	ID=gene-TS60_RS07425;Name=TS60_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07425;old_locus_tag=TS60_0683
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	87198	87353	.	+	0	ID=cds-WP_015545605.1;Parent=gene-TS60_RS07425;Dbxref=GenBank:WP_015545605.1;Name=WP_015545605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07425;product=transposase;protein_id=WP_015545605.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	87472	87681	.	-	.	ID=gene-TS60_RS03250;Name=TS60_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03250;old_locus_tag=TS60_0684
NZ_LAEX01000007.1	Protein Homology	CDS	87472	87681	.	-	0	ID=cds-WP_045596579.1;Parent=gene-TS60_RS03250;Dbxref=GenBank:WP_045596579.1;Name=WP_045596579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166780.1;locus_tag=TS60_RS03250;product=hypothetical protein;protein_id=WP_045596579.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	88059	89732	.	-	.	ID=gene-TS60_RS03255;Name=TS60_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03255;old_locus_tag=TS60_0685
NZ_LAEX01000007.1	Protein Homology	CDS	88059	89732	.	-	0	ID=cds-WP_045596581.1;Parent=gene-TS60_RS03255;Dbxref=GenBank:WP_045596581.1;Name=WP_045596581.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03255;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596581.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	90035	90640	.	-	.	ID=gene-TS60_RS03260;Name=TS60_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03260;old_locus_tag=TS60_0686
NZ_LAEX01000007.1	Protein Homology	CDS	90035	90640	.	-	0	ID=cds-WP_015545521.1;Parent=gene-TS60_RS03260;Dbxref=GenBank:WP_015545521.1;Name=WP_015545521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545521.1;locus_tag=TS60_RS03260;product=hypothetical protein;protein_id=WP_015545521.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	90640	91527	.	-	.	ID=gene-TS60_RS03265;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=TS60_RS03265;old_locus_tag=TS60_0687
NZ_LAEX01000007.1	Protein Homology	CDS	90640	91527	.	-	0	ID=cds-WP_011166783.1;Parent=gene-TS60_RS03265;Dbxref=GenBank:WP_011166783.1;Name=WP_011166783.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862825.1;locus_tag=TS60_RS03265;product=translation elongation factor Ts;protein_id=WP_011166783.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	91539	92417	.	-	.	ID=gene-TS60_RS03270;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=TS60_RS03270;old_locus_tag=TS60_0688
NZ_LAEX01000007.1	Protein Homology	CDS	91539	92417	.	-	0	ID=cds-WP_015545445.1;Parent=gene-TS60_RS03270;Dbxref=GenBank:WP_015545445.1;Name=WP_015545445.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729687.1;locus_tag=TS60_RS03270;product=30S ribosomal protein S2;protein_id=WP_015545445.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	92623	93741	.	-	.	ID=gene-TS60_RS03275;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=TS60_RS03275;old_locus_tag=TS60_0689
NZ_LAEX01000007.1	Protein Homology	CDS	92623	93741	.	-	0	ID=cds-WP_011166785.1;Parent=gene-TS60_RS03275;Dbxref=GenBank:WP_011166785.1;Name=WP_011166785.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862826.1;locus_tag=TS60_RS03275;product=molecular chaperone DnaJ;protein_id=WP_011166785.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	93805	95580	.	-	.	ID=gene-TS60_RS03280;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=TS60_RS03280;old_locus_tag=TS60_0690
NZ_LAEX01000007.1	Protein Homology	CDS	93805	95580	.	-	0	ID=cds-WP_011166786.1;Parent=gene-TS60_RS03280;Dbxref=GenBank:WP_011166786.1;Name=WP_011166786.1;Ontology_term=GO:0006457,GO:0005524,GO:0051082;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269380.1;locus_tag=TS60_RS03280;product=molecular chaperone DnaK;protein_id=WP_011166786.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	95636	96238	.	-	.	ID=gene-TS60_RS03285;Name=TS60_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03285;old_locus_tag=TS60_0691
NZ_LAEX01000007.1	Protein Homology	CDS	95636	96238	.	-	0	ID=cds-WP_015545681.1;Parent=gene-TS60_RS03285;Dbxref=GenBank:WP_015545681.1;Name=WP_015545681.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051082,GO:0051087;gbkey=CDS;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,unfolded protein binding|0051082||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269379.1;locus_tag=TS60_RS03285;product=nucleotide exchange factor GrpE;protein_id=WP_015545681.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	96240	97262	.	-	.	ID=gene-TS60_RS03290;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=TS60_RS03290;old_locus_tag=TS60_0692
NZ_LAEX01000007.1	Protein Homology	CDS	96240	97262	.	-	0	ID=cds-WP_013729691.1;Parent=gene-TS60_RS03290;Dbxref=GenBank:WP_013729691.1;Name=WP_013729691.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729691.1;locus_tag=TS60_RS03290;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_013729691.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	97267	99408	.	-	.	ID=gene-TS60_RS03295;Name=TS60_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03295;old_locus_tag=TS60_0693
NZ_LAEX01000007.1	Protein Homology	CDS	97267	99408	.	-	0	ID=cds-WP_011166789.1;Parent=gene-TS60_RS03295;Dbxref=GenBank:WP_011166789.1;Name=WP_011166789.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447684.1;locus_tag=TS60_RS03295;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_011166789.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	99571	100437	.	-	.	ID=gene-TS60_RS03300;Name=TS60_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03300;old_locus_tag=TS60_0694
NZ_LAEX01000007.1	Protein Homology	CDS	99571	100437	.	-	0	ID=cds-WP_015545416.1;Parent=gene-TS60_RS03300;Dbxref=GenBank:WP_015545416.1;Name=WP_015545416.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584372.1;locus_tag=TS60_RS03300;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_015545416.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	100437	100982	.	-	.	ID=gene-TS60_RS03305;Name=TS60_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03305;old_locus_tag=TS60_0695
NZ_LAEX01000007.1	Protein Homology	CDS	100437	100982	.	-	0	ID=cds-WP_011166791.1;Parent=gene-TS60_RS03305;Dbxref=GenBank:WP_011166791.1;Name=WP_011166791.1;Ontology_term=GO:0030488,GO:0003723,GO:0008175,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA methyltransferase activity|0008175||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698376.1;locus_tag=TS60_RS03305;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_011166791.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	100995	101597	.	-	.	ID=gene-TS60_RS03310;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=TS60_RS03310;old_locus_tag=TS60_0696
NZ_LAEX01000007.1	Protein Homology	CDS	100995	101597	.	-	0	ID=cds-WP_011166792.1;Parent=gene-TS60_RS03310;Dbxref=GenBank:WP_011166792.1;Name=WP_011166792.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698377.1;locus_tag=TS60_RS03310;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_011166792.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	101798	104296	.	+	.	ID=gene-TS60_RS03315;Name=TS60_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03315;old_locus_tag=TS60_0697
NZ_LAEX01000007.1	Protein Homology	CDS	101798	104296	.	+	0	ID=cds-WP_015545590.1;Parent=gene-TS60_RS03315;Dbxref=GenBank:WP_015545590.1;Name=WP_015545590.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545590.1;locus_tag=TS60_RS03315;product=MOLPALP family lipoprotein;protein_id=WP_015545590.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	104352	105731	.	-	.	ID=gene-TS60_RS03320;Name=TS60_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03320;old_locus_tag=TS60_0698
NZ_LAEX01000007.1	Protein Homology	CDS	104352	105731	.	-	0	ID=cds-WP_011166794.1;Parent=gene-TS60_RS03320;Dbxref=GenBank:WP_011166794.1;Name=WP_011166794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545601.1;locus_tag=TS60_RS03320;product=MSC_0618 family F1-like ATPase beta subunit;protein_id=WP_011166794.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	105731	107278	.	-	.	ID=gene-TS60_RS03325;Name=TS60_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03325;old_locus_tag=TS60_0699
NZ_LAEX01000007.1	Protein Homology	CDS	105731	107278	.	-	0	ID=cds-WP_015545383.1;Parent=gene-TS60_RS03325;Dbxref=GenBank:WP_015545383.1;Name=WP_015545383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862852.1;locus_tag=TS60_RS03325;product=MSC_0619 family F1-like ATPase alpha subunit;protein_id=WP_015545383.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	107283	109595	.	-	.	ID=gene-TS60_RS03330;Name=TS60_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03330;old_locus_tag=TS60_0700
NZ_LAEX01000007.1	Protein Homology	CDS	107283	109595	.	-	0	ID=cds-WP_011166796.1;Parent=gene-TS60_RS03330;Dbxref=GenBank:WP_011166796.1;Name=WP_011166796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447673.1;locus_tag=TS60_RS03330;product=MSC_0620 family F1-like ATPase-associated subunit;protein_id=WP_011166796.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	109597	110040	.	-	.	ID=gene-TS60_RS03335;Name=TS60_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03335;old_locus_tag=TS60_0701
NZ_LAEX01000007.1	Protein Homology	CDS	109597	110040	.	-	0	ID=cds-WP_011166797.1;Parent=gene-TS60_RS03335;Dbxref=GenBank:WP_011166797.1;Name=WP_011166797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166797.1;locus_tag=TS60_RS03335;product=MSC_0621 family F1-like ATPase epsilon subunit;protein_id=WP_011166797.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	110040	110951	.	-	.	ID=gene-TS60_RS03340;Name=TS60_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03340;old_locus_tag=TS60_0702
NZ_LAEX01000007.1	Protein Homology	CDS	110040	110951	.	-	0	ID=cds-WP_011166798.1;Parent=gene-TS60_RS03340;Dbxref=GenBank:WP_011166798.1;Name=WP_011166798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729702.1;locus_tag=TS60_RS03340;product=MSC_0622 family F1-like ATPase gamma subunit;protein_id=WP_011166798.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	110953	111447	.	-	.	ID=gene-TS60_RS03345;Name=TS60_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03345;old_locus_tag=TS60_0703
NZ_LAEX01000007.1	Protein Homology	CDS	110953	111447	.	-	0	ID=cds-WP_011166799.1;Parent=gene-TS60_RS03345;Dbxref=GenBank:WP_011166799.1;Name=WP_011166799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862856.1;locus_tag=TS60_RS03345;product=DUF2714 domain-containing protein;protein_id=WP_011166799.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	111422	112885	.	-	.	ID=gene-TS60_RS03350;Name=TS60_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03350;old_locus_tag=TS60_0704
NZ_LAEX01000007.1	Protein Homology	CDS	111422	112885	.	-	0	ID=cds-WP_011166800.1;Parent=gene-TS60_RS03350;Dbxref=GenBank:WP_011166800.1;Name=WP_011166800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862857.1;locus_tag=TS60_RS03350;product=MSC_0624 family F1-like ATPase-associated membrane protein;protein_id=WP_011166800.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	112916	115495	.	-	.	ID=gene-TS60_RS03355;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=TS60_RS03355;old_locus_tag=TS60_0705
NZ_LAEX01000007.1	Protein Homology	CDS	112916	115495	.	-	0	ID=cds-WP_011166801.1;Parent=gene-TS60_RS03355;Dbxref=GenBank:WP_011166801.1;Name=WP_011166801.1;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166801.1;locus_tag=TS60_RS03355;product=Ig-specific serine endopeptidase MIP;protein_id=WP_011166801.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	115519	117771	.	-	.	ID=gene-TS60_RS03360;Name=TS60_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03360;old_locus_tag=TS60_0706
NZ_LAEX01000007.1	Protein Homology	CDS	115519	117771	.	-	0	ID=cds-WP_011166802.1;Parent=gene-TS60_RS03360;Dbxref=GenBank:WP_011166802.1;Name=WP_011166802.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584365.1;locus_tag=TS60_RS03360;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_011166802.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	118044	120599	.	-	.	ID=gene-TS60_RS03365;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=TS60_RS03365;old_locus_tag=TS60_0707
NZ_LAEX01000007.1	Protein Homology	CDS	118044	120599	.	-	0	ID=cds-WP_011166803.1;Parent=gene-TS60_RS03365;Dbxref=GenBank:WP_011166803.1;Name=WP_011166803.1;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862860.1;locus_tag=TS60_RS03365;product=Ig-specific serine endopeptidase MIP;protein_id=WP_011166803.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	120619	122871	.	-	.	ID=gene-TS60_RS03370;Name=TS60_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03370;old_locus_tag=TS60_0708
NZ_LAEX01000007.1	Protein Homology	CDS	120619	122871	.	-	0	ID=cds-WP_015545324.1;Parent=gene-TS60_RS03370;Dbxref=GenBank:WP_015545324.1;Name=WP_015545324.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584365.1;locus_tag=TS60_RS03370;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_015545324.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	123038	124464	.	-	.	ID=gene-TS60_RS06600;Name=TS60_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06600
NZ_LAEX01000007.1	Protein Homology	CDS	123972	124464	.	-	0	ID=cds-WP_145837453.1;Parent=gene-TS60_RS06600;Dbxref=GenBank:WP_145837453.1;Name=WP_145837453.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06600;product=IS3-like element IS1296 family transposase;protein_id=WP_145837453.1;transl_table=4
NZ_LAEX01000007.1	Protein Homology	CDS	123038	123972	.	-	2	ID=cds-WP_145837453.1;Parent=gene-TS60_RS06600;Dbxref=GenBank:WP_145837453.1;Name=WP_145837453.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06600;product=IS3-like element IS1296 family transposase;protein_id=WP_145837453.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	124541	127101	.	-	.	ID=gene-TS60_RS07020;Name=mip;gbkey=Gene;gene=mip;gene_biotype=pseudogene;locus_tag=TS60_RS07020;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	124541	127101	.	-	0	ID=cds-TS60_RS07020;Parent=gene-TS60_RS07020;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729709.1;locus_tag=TS60_RS07020;product=Ig-specific serine endopeptidase MIP;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	127116	129368	.	-	.	ID=gene-TS60_RS03390;Name=TS60_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03390;old_locus_tag=TS60_0713
NZ_LAEX01000007.1	Protein Homology	CDS	127116	129368	.	-	0	ID=cds-WP_011166808.1;Parent=gene-TS60_RS03390;Dbxref=GenBank:WP_011166808.1;Name=WP_011166808.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729710.1;locus_tag=TS60_RS03390;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_011166808.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	129599	131275	.	-	.	ID=gene-TS60_RS03395;Name=TS60_RS03395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS03395;old_locus_tag=TS60_0715;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	129599	131275	.	-	0	ID=cds-TS60_RS03395;Parent=gene-TS60_RS03395;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03395;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	131563	134151	.	-	.	ID=gene-TS60_RS03400;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=TS60_RS03400;old_locus_tag=TS60_0716
NZ_LAEX01000007.1	Protein Homology	CDS	131563	134151	.	-	0	ID=cds-WP_011166809.1;Parent=gene-TS60_RS03400;Dbxref=GenBank:WP_011166809.1;Name=WP_011166809.1;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387231.1;locus_tag=TS60_RS03400;product=Ig-specific serine endopeptidase MIP;protein_id=WP_011166809.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	134172	136430	.	-	.	ID=gene-TS60_RS03405;Name=TS60_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03405;old_locus_tag=TS60_0717
NZ_LAEX01000007.1	Protein Homology	CDS	134172	136430	.	-	0	ID=cds-WP_045596587.1;Parent=gene-TS60_RS03405;Dbxref=GenBank:WP_045596587.1;Name=WP_045596587.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862865.1;locus_tag=TS60_RS03405;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_045596587.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	136585	136923	.	-	.	ID=gene-TS60_RS07430;Name=TS60_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07430
NZ_LAEX01000007.1	Protein Homology	CDS	136585	136923	.	-	0	ID=cds-WP_308810653.1;Parent=gene-TS60_RS07430;Dbxref=GenBank:WP_308810653.1;Name=WP_308810653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.6;locus_tag=TS60_RS07430;product=DUF2326 domain-containing protein;protein_id=WP_308810653.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	136898	137314	.	-	.	ID=gene-TS60_RS07435;Name=TS60_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07435;old_locus_tag=TS60_0719
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	136898	137314	.	-	0	ID=cds-WP_230592180.1;Parent=gene-TS60_RS07435;Dbxref=GenBank:WP_230592180.1;Name=WP_230592180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07435;product=hypothetical protein;protein_id=WP_230592180.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	137332	137829	.	-	.	ID=gene-TS60_RS07440;Name=TS60_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07440;old_locus_tag=TS60_0720
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	137332	137829	.	-	0	ID=cds-WP_011166814.1;Parent=gene-TS60_RS07440;Dbxref=GenBank:WP_011166814.1;Name=WP_011166814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07440;product=hypothetical protein;protein_id=WP_011166814.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	137967	138296	.	-	.	ID=gene-TS60_RS07445;Name=TS60_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07445;old_locus_tag=TS60_0721
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	137967	138296	.	-	0	ID=cds-WP_011166815.1;Parent=gene-TS60_RS07445;Dbxref=GenBank:WP_011166815.1;Name=WP_011166815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07445;product=hypothetical protein;protein_id=WP_011166815.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	138287	138514	.	-	.	ID=gene-TS60_RS03415;Name=TS60_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03415;old_locus_tag=TS60_0722
NZ_LAEX01000007.1	Protein Homology	CDS	138287	138514	.	-	0	ID=cds-WP_011166816.1;Parent=gene-TS60_RS03415;Dbxref=GenBank:WP_011166816.1;Name=WP_011166816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447895.1;locus_tag=TS60_RS03415;product=ABC-three component system middle component 6;protein_id=WP_011166816.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	138517	138981	.	-	.	ID=gene-TS60_RS07450;Name=TS60_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07450;old_locus_tag=TS60_0723
NZ_LAEX01000007.1	Protein Homology	CDS	138517	138981	.	-	0	ID=cds-WP_011166817.1;Parent=gene-TS60_RS07450;Dbxref=GenBank:WP_011166817.1;Name=WP_011166817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166817.1;locus_tag=TS60_RS07450;product=ABC-three component system protein;protein_id=WP_011166817.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	139108	139281	.	-	.	ID=gene-TS60_RS07965;Name=TS60_RS07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07965;partial=true;pseudo=true;start_range=.,139108
NZ_LAEX01000007.1	Protein Homology	CDS	139108	139281	.	-	0	ID=cds-TS60_RS07965;Parent=gene-TS60_RS07965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046551.2;locus_tag=TS60_RS07965;partial=true;product=SMEK domain-containing protein;pseudo=true;start_range=.,139108;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	139509	140354	.	-	.	ID=gene-TS60_RS03425;Name=TS60_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03425;old_locus_tag=TS60_0724
NZ_LAEX01000007.1	Protein Homology	CDS	139509	140354	.	-	0	ID=cds-WP_011166818.1;Parent=gene-TS60_RS03425;Dbxref=GenBank:WP_011166818.1;Name=WP_011166818.1;Ontology_term=GO:0006096,GO:0030388,GO:0004332,GO:0008270;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=glycolytic process|0006096||IEA,fructose 1%2C6-bisphosphate metabolic process|0030388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387480.1;locus_tag=TS60_RS03425;product=class II fructose-bisphosphate aldolase;protein_id=WP_011166818.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	140557	141291	.	+	.	ID=gene-TS60_RS03430;Name=TS60_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03430;old_locus_tag=TS60_0725
NZ_LAEX01000007.1	Protein Homology	CDS	140557	141291	.	+	0	ID=cds-WP_011166819.1;Parent=gene-TS60_RS03430;Dbxref=GenBank:WP_011166819.1;Name=WP_011166819.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269574.1;locus_tag=TS60_RS03430;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011166819.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	141300	143186	.	+	.	ID=gene-TS60_RS03435;Name=TS60_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03435;old_locus_tag=TS60_0726
NZ_LAEX01000007.1	Protein Homology	CDS	141300	143186	.	+	0	ID=cds-WP_011166820.1;Parent=gene-TS60_RS03435;Dbxref=GenBank:WP_011166820.1;Name=WP_011166820.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698397.1;locus_tag=TS60_RS03435;product=PTS transporter subunit EIIC;protein_id=WP_011166820.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	143199	143573	.	+	.	ID=gene-TS60_RS07460;Name=TS60_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07460;old_locus_tag=TS60_0727
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	143199	143573	.	+	0	ID=cds-WP_011166821.1;Parent=gene-TS60_RS07460;Dbxref=GenBank:WP_011166821.1;Name=WP_011166821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07460;product=carbohydrate kinase family protein;protein_id=WP_011166821.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	143578	144141	.	+	.	ID=gene-TS60_RS07465;Name=TS60_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07465;old_locus_tag=TS60_0728
NZ_LAEX01000007.1	Protein Homology	CDS	143578	144141	.	+	0	ID=cds-WP_015545589.1;Parent=gene-TS60_RS07465;Dbxref=GenBank:WP_015545589.1;Name=WP_015545589.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012515.6;locus_tag=TS60_RS07465;product=1-phosphofructokinase family hexose kinase;protein_id=WP_015545589.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	144109	144621	.	-	.	ID=gene-TS60_RS03445;Name=TS60_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03445;old_locus_tag=TS60_0729
NZ_LAEX01000007.1	Protein Homology	CDS	144109	144621	.	-	0	ID=cds-WP_011166822.1;Parent=gene-TS60_RS03445;Dbxref=GenBank:WP_011166822.1;Name=WP_011166822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166822.1;locus_tag=TS60_RS03445;product=SMEK domain-containing protein;protein_id=WP_011166822.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	144724	146181	.	-	.	ID=gene-TS60_RS06615;Name=TS60_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06615;old_locus_tag=TS60_0730
NZ_LAEX01000007.1	Protein Homology	CDS	144724	146181	.	-	0	ID=cds-WP_308810654.1;Parent=gene-TS60_RS06615;Dbxref=GenBank:WP_308810654.1;Name=WP_308810654.1;Ontology_term=GO:0032508,GO:0003677,GO:0003678,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;go_process=obsolete DNA duplex unwinding|0032508||IEA;inference=COORDINATES: protein motif:HMM:NF024991.6;locus_tag=TS60_RS06615;product=ATP-dependent DNA helicase;protein_id=WP_308810654.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	146356	146988	.	-	.	ID=gene-TS60_RS06620;Name=TS60_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06620;old_locus_tag=TS60_0731
NZ_LAEX01000007.1	Protein Homology	CDS	146356	146988	.	-	0	ID=cds-WP_011166824.1;Parent=gene-TS60_RS06620;Dbxref=GenBank:WP_011166824.1;Name=WP_011166824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166824.1;locus_tag=TS60_RS06620;product=hypothetical protein;protein_id=WP_011166824.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	147909	148286	.	-	.	ID=gene-TS60_RS03460;Name=TS60_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03460;old_locus_tag=TS60_0732
NZ_LAEX01000007.1	Protein Homology	CDS	147909	148286	.	-	0	ID=cds-WP_011166826.1;Parent=gene-TS60_RS03460;Dbxref=GenBank:WP_011166826.1;Name=WP_011166826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166826.1;locus_tag=TS60_RS03460;product=DUF2130 domain-containing protein;protein_id=WP_011166826.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	148359	149516	.	-	.	ID=gene-TS60_RS03465;Name=TS60_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03465;old_locus_tag=TS60_0733
NZ_LAEX01000007.1	Protein Homology	CDS	148359	149516	.	-	0	ID=cds-WP_011166827.1;Parent=gene-TS60_RS03465;Dbxref=GenBank:WP_011166827.1;Name=WP_011166827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166827.1;locus_tag=TS60_RS03465;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166827.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	149501	150292	.	-	.	ID=gene-TS60_RS07840;Name=TS60_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07840
NZ_LAEX01000007.1	Protein Homology	CDS	149501	150292	.	-	0	ID=cds-WP_334198831.1;Parent=gene-TS60_RS07840;Dbxref=GenBank:WP_334198831.1;Name=WP_334198831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021427.6;locus_tag=TS60_RS07840;product=DUF2130 domain-containing protein;protein_id=WP_334198831.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	150694	152625	.	+	.	ID=gene-TS60_RS07475;Name=TS60_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07475;old_locus_tag=TS60_0735
NZ_LAEX01000007.1	Protein Homology	CDS	150694	152625	.	+	0	ID=cds-WP_011166830.1;Parent=gene-TS60_RS07475;Dbxref=GenBank:WP_011166830.1;Name=WP_011166830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166830.1;locus_tag=TS60_RS07475;product=DUF4011 domain-containing protein;protein_id=WP_011166830.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	152707	153063	.	+	.	ID=gene-TS60_RS07480;Name=TS60_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07480;old_locus_tag=TS60_0736
NZ_LAEX01000007.1	Protein Homology	CDS	152707	153063	.	+	0	ID=cds-WP_011166831.1;Parent=gene-TS60_RS07480;Dbxref=GenBank:WP_011166831.1;Name=WP_011166831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166831.1;locus_tag=TS60_RS07480;product=hypothetical protein;protein_id=WP_011166831.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	153233	155374	.	+	.	ID=gene-TS60_RS07485;Name=TS60_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07485;old_locus_tag=TS60_0737
NZ_LAEX01000007.1	Protein Homology	CDS	153233	155374	.	+	0	ID=cds-WP_011166832.1;Parent=gene-TS60_RS07485;Dbxref=GenBank:WP_011166832.1;Name=WP_011166832.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.6;locus_tag=TS60_RS07485;product=AAA domain-containing protein;protein_id=WP_011166832.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	155791	156276	.	+	.	ID=gene-TS60_RS07845;Name=TS60_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07845;old_locus_tag=TS60_0738
NZ_LAEX01000007.1	Protein Homology	CDS	155791	156276	.	+	0	ID=cds-WP_011166833.1;Parent=gene-TS60_RS07845;Dbxref=GenBank:WP_011166833.1;Name=WP_011166833.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=TS60_RS07845;product=Fic family protein;protein_id=WP_011166833.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	156558	157861	.	+	.	ID=gene-TS60_RS07970;Name=TS60_RS07970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07970;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	156558	157861	.	+	0	ID=cds-TS60_RS07970;Parent=gene-TS60_RS07970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862871.1;locus_tag=TS60_RS07970;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	157937	159336	.	+	.	ID=gene-TS60_RS06645;Name=TS60_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06645
NZ_LAEX01000007.1	Protein Homology	CDS	157937	158429	.	+	0	ID=cds-WP_139552578.1;Parent=gene-TS60_RS06645;Dbxref=GenBank:WP_139552578.1;Name=WP_139552578.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06645;product=IS3-like element IS1296 family transposase;protein_id=WP_139552578.1;transl_table=4
NZ_LAEX01000007.1	Protein Homology	CDS	158429	159336	.	+	2	ID=cds-WP_139552578.1;Parent=gene-TS60_RS06645;Dbxref=GenBank:WP_139552578.1;Name=WP_139552578.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06645;product=IS3-like element IS1296 family transposase;protein_id=WP_139552578.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	159353	159493	.	-	.	ID=gene-TS60_RS03500;Name=TS60_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03500;old_locus_tag=TS60_0743
NZ_LAEX01000007.1	Protein Homology	CDS	159353	159493	.	-	0	ID=cds-WP_015545647.1;Parent=gene-TS60_RS03500;Dbxref=GenBank:WP_015545647.1;Name=WP_015545647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697753.1;locus_tag=TS60_RS03500;product=hypothetical protein;protein_id=WP_015545647.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	159535	159948	.	-	.	ID=gene-TS60_RS07500;Name=TS60_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07500
NZ_LAEX01000007.1	Protein Homology	CDS	159535	159948	.	-	0	ID=cds-WP_230592182.1;Parent=gene-TS60_RS07500;Dbxref=GenBank:WP_230592182.1;Name=WP_230592182.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: protein motif:HMM:TIGR01550.1;locus_tag=TS60_RS07500;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_230592182.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	160666	160944	.	-	.	ID=gene-TS60_RS07505;Name=TS60_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07505;old_locus_tag=TS60_0745
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	160666	160944	.	-	0	ID=cds-WP_015545683.1;Parent=gene-TS60_RS07505;Dbxref=GenBank:WP_015545683.1;Name=WP_015545683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07505;product=hypothetical protein;protein_id=WP_015545683.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	161289	161888	.	-	.	ID=gene-TS60_RS07040;Name=TS60_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07040;old_locus_tag=TS60_0746
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	161289	161888	.	-	0	ID=cds-WP_015545682.1;Parent=gene-TS60_RS07040;Dbxref=GenBank:WP_015545682.1;Name=WP_015545682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07040;product=hypothetical protein;protein_id=WP_015545682.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	162009	163683	.	+	.	ID=gene-TS60_RS03520;Name=TS60_RS03520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS03520;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	162009	163683	.	+	0	ID=cds-TS60_RS03520;Parent=gene-TS60_RS03520;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03520;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	163692	164579	.	-	.	ID=gene-TS60_RS03525;Name=TS60_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03525;old_locus_tag=TS60_0749
NZ_LAEX01000007.1	Protein Homology	CDS	163692	164579	.	-	0	ID=cds-WP_011166840.1;Parent=gene-TS60_RS03525;Dbxref=GenBank:WP_011166840.1;Name=WP_011166840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166840.1;locus_tag=TS60_RS03525;product=Mbov_0396 family ICE element transmembrane protein;protein_id=WP_011166840.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	164872	166095	.	-	.	ID=gene-TS60_RS03530;Name=TS60_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03530;old_locus_tag=TS60_0750
NZ_LAEX01000007.1	Protein Homology	CDS	164872	166095	.	-	0	ID=cds-WP_045596591.1;Parent=gene-TS60_RS03530;Dbxref=GenBank:WP_045596591.1;Name=WP_045596591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166841.1;locus_tag=TS60_RS03530;product=hypothetical protein;protein_id=WP_045596591.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	166459	166662	.	-	.	ID=gene-TS60_RS03535;Name=TS60_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03535;old_locus_tag=TS60_0751
NZ_LAEX01000007.1	Protein Homology	CDS	166459	166662	.	-	0	ID=cds-WP_011166842.1;Parent=gene-TS60_RS03535;Dbxref=GenBank:WP_011166842.1;Name=WP_011166842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166842.1;locus_tag=TS60_RS03535;product=hypothetical protein;protein_id=WP_011166842.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	167035	168867	.	+	.	ID=gene-TS60_RS03540;Name=TS60_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03540;old_locus_tag=TS60_0752
NZ_LAEX01000007.1	Protein Homology	CDS	167035	168867	.	+	0	ID=cds-WP_015545606.1;Parent=gene-TS60_RS03540;Dbxref=GenBank:WP_015545606.1;Name=WP_015545606.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862872.1;locus_tag=TS60_RS03540;product=ribonuclease J;protein_id=WP_015545606.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	168942	169886	.	+	.	ID=gene-TS60_RS03545;Name=TS60_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03545;old_locus_tag=TS60_0753
NZ_LAEX01000007.1	Protein Homology	CDS	168942	169886	.	+	0	ID=cds-WP_045596594.1;Parent=gene-TS60_RS03545;Dbxref=GenBank:WP_045596594.1;Name=WP_045596594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862873.1;locus_tag=TS60_RS03545;product=hypothetical protein;protein_id=WP_045596594.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	169934	170050	.	-	.	ID=gene-TS60_RS06660;Name=TS60_RS06660;end_range=170050,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06660;partial=true;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	169934	170050	.	-	0	ID=cds-TS60_RS06660;Parent=gene-TS60_RS06660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=170050,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06660;partial=true;product=IS3 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	170139	171812	.	-	.	ID=gene-TS60_RS03550;Name=TS60_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03550;old_locus_tag=TS60_0754
NZ_LAEX01000007.1	Protein Homology	CDS	170139	171812	.	-	0	ID=cds-WP_011166374.1-2;Parent=gene-TS60_RS03550;Dbxref=GenBank:WP_011166374.1;Name=WP_011166374.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03550;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166374.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	171923	173239	.	-	.	ID=gene-TS60_RS06665;Name=TS60_RS06665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06665;partial=true;pseudo=true;start_range=.,171923
NZ_LAEX01000007.1	Protein Homology	CDS	171923	173239	.	-	0	ID=cds-TS60_RS06665;Parent=gene-TS60_RS06665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06665;partial=true;product=IS3-like element IS1296 family transposase;pseudo=true;start_range=.,171923;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	173552	173857	.	-	.	ID=gene-TS60_RS03570;Name=TS60_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03570;old_locus_tag=TS60_0758
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	173552	173857	.	-	0	ID=cds-WP_011166846.1;Parent=gene-TS60_RS03570;Dbxref=GenBank:WP_011166846.1;Name=WP_011166846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS03570;product=hypothetical protein;protein_id=WP_011166846.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	173874	176492	.	-	.	ID=gene-TS60_RS03575;Name=TS60_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03575;old_locus_tag=TS60_0759
NZ_LAEX01000007.1	Protein Homology	CDS	173874	176492	.	-	0	ID=cds-WP_045596597.1;Parent=gene-TS60_RS03575;Dbxref=GenBank:WP_045596597.1;Name=WP_045596597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166847.1;locus_tag=TS60_RS03575;product=YobI family P-loop NTPase;protein_id=WP_045596597.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	176552	177055	.	-	.	ID=gene-TS60_RS03580;Name=TS60_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03580;old_locus_tag=TS60_0760
NZ_LAEX01000007.1	Protein Homology	CDS	176552	177055	.	-	0	ID=cds-WP_011166848.1;Parent=gene-TS60_RS03580;Dbxref=GenBank:WP_011166848.1;Name=WP_011166848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166848.1;locus_tag=TS60_RS03580;product=AbiJ-related protein;protein_id=WP_011166848.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	177233	178447	.	-	.	ID=gene-TS60_RS03585;Name=TS60_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03585;old_locus_tag=TS60_0761
NZ_LAEX01000007.1	Protein Homology	CDS	177233	178447	.	-	0	ID=cds-WP_011166849.1;Parent=gene-TS60_RS03585;Dbxref=GenBank:WP_011166849.1;Name=WP_011166849.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447921.1;locus_tag=TS60_RS03585;product=phosphoglycerate kinase;protein_id=WP_011166849.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	178562	179578	.	-	.	ID=gene-TS60_RS03590;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=TS60_RS03590;old_locus_tag=TS60_0762
NZ_LAEX01000007.1	Protein Homology	CDS	178562	179578	.	-	0	ID=cds-WP_015545284.1;Parent=gene-TS60_RS03590;Dbxref=GenBank:WP_015545284.1;Name=WP_015545284.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166850.1;locus_tag=TS60_RS03590;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_015545284.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	179679	180617	.	-	.	ID=gene-TS60_RS03595;Name=TS60_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03595;old_locus_tag=TS60_0763
NZ_LAEX01000007.1	Protein Homology	CDS	179679	180617	.	-	0	ID=cds-WP_011166851.1;Parent=gene-TS60_RS03595;Dbxref=GenBank:WP_011166851.1;Name=WP_011166851.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862877.1;locus_tag=TS60_RS03595;product=ATP-binding protein;protein_id=WP_011166851.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	180627	181811	.	-	.	ID=gene-TS60_RS03600;Name=TS60_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03600;old_locus_tag=TS60_0764
NZ_LAEX01000007.1	Protein Homology	CDS	180627	181811	.	-	0	ID=cds-WP_011166852.1;Parent=gene-TS60_RS03600;Dbxref=GenBank:WP_011166852.1;Name=WP_011166852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862878.1;locus_tag=TS60_RS03600;product=DnaD domain protein;protein_id=WP_011166852.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	181968	182792	.	-	.	ID=gene-TS60_RS03605;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=TS60_RS03605;old_locus_tag=TS60_0765
NZ_LAEX01000007.1	Protein Homology	CDS	181968	182792	.	-	0	ID=cds-WP_011166853.1;Parent=gene-TS60_RS03605;Dbxref=GenBank:WP_011166853.1;Name=WP_011166853.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862879.1;locus_tag=TS60_RS03605;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_011166853.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	182803	185538	.	-	.	ID=gene-TS60_RS03610;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=TS60_RS03610;old_locus_tag=TS60_0766
NZ_LAEX01000007.1	Protein Homology	CDS	182803	185538	.	-	0	ID=cds-WP_045596599.1;Parent=gene-TS60_RS03610;Dbxref=GenBank:WP_045596599.1;Name=WP_045596599.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698357.1;locus_tag=TS60_RS03610;product=DNA polymerase I;protein_id=WP_045596599.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	185547	188510	.	-	.	ID=gene-TS60_RS03615;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=TS60_RS03615;old_locus_tag=TS60_0767
NZ_LAEX01000007.1	Protein Homology	CDS	185547	188510	.	-	0	ID=cds-WP_011166855.1;Parent=gene-TS60_RS03615;Dbxref=GenBank:WP_011166855.1;Name=WP_011166855.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;gene=dnaE;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862881.1;locus_tag=TS60_RS03615;product=DNA polymerase III subunit alpha;protein_id=WP_011166855.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	188821	190494	.	-	.	ID=gene-TS60_RS03620;Name=TS60_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03620;old_locus_tag=TS60_0768
NZ_LAEX01000007.1	Protein Homology	CDS	188821	190494	.	-	0	ID=cds-WP_080889693.1;Parent=gene-TS60_RS03620;Dbxref=GenBank:WP_080889693.1;Name=WP_080889693.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03620;product=IS1634-like element IS1634 family transposase;protein_id=WP_080889693.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	190666	191910	.	-	.	ID=gene-TS60_RS03625;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=TS60_RS03625;old_locus_tag=TS60_0769
NZ_LAEX01000007.1	Protein Homology	CDS	190666	191910	.	-	0	ID=cds-WP_011166856.1;Parent=gene-TS60_RS03625;Dbxref=GenBank:WP_011166856.1;Name=WP_011166856.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862882.1;locus_tag=TS60_RS03625;product=tyrosine--tRNA ligase;protein_id=WP_011166856.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	191919	192980	.	-	.	ID=gene-TS60_RS03630;Name=TS60_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03630;old_locus_tag=TS60_0770
NZ_LAEX01000007.1	Protein Homology	CDS	191919	192980	.	-	0	ID=cds-WP_015545670.1;Parent=gene-TS60_RS03630;Dbxref=GenBank:WP_015545670.1;Name=WP_015545670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729760.1;locus_tag=TS60_RS03630;product=nicotinate phosphoribosyltransferase;protein_id=WP_015545670.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	192958	193566	.	-	.	ID=gene-TS60_RS03635;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=TS60_RS03635;old_locus_tag=TS60_0771
NZ_LAEX01000007.1	Protein Homology	CDS	192958	193566	.	-	0	ID=cds-WP_015545492.1;Parent=gene-TS60_RS03635;Dbxref=GenBank:WP_015545492.1;Name=WP_015545492.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364155.1;locus_tag=TS60_RS03635;product=YtpR family tRNA-binding protein;protein_id=WP_015545492.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	193641	194480	.	+	.	ID=gene-TS60_RS03640;Name=TS60_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03640;old_locus_tag=TS60_0772
NZ_LAEX01000007.1	Protein Homology	CDS	193641	194480	.	+	0	ID=cds-WP_011166859.1;Parent=gene-TS60_RS03640;Dbxref=GenBank:WP_011166859.1;Name=WP_011166859.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862885.1;locus_tag=TS60_RS03640;product=DegV family protein;protein_id=WP_011166859.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	194491	195342	.	+	.	ID=gene-TS60_RS03645;Name=TS60_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03645;old_locus_tag=TS60_0773
NZ_LAEX01000007.1	Protein Homology	CDS	194491	195342	.	+	0	ID=cds-WP_015545626.1;Parent=gene-TS60_RS03645;Dbxref=GenBank:WP_015545626.1;Name=WP_015545626.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269605.1;locus_tag=TS60_RS03645;product=DegV family protein;protein_id=WP_015545626.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	195379	195453	.	-	.	ID=gene-TS60_RS03650;Name=TS60_RS03650;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03650;old_locus_tag=TS60_0774
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	195379	195453	.	-	.	ID=rna-TS60_RS03650;Parent=gene-TS60_RS03650;anticodon=(pos:complement(195419..195421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03650;product=tRNA-Trp
NZ_LAEX01000007.1	tRNAscan-SE	exon	195379	195453	.	-	.	ID=exon-TS60_RS03650-1;Parent=rna-TS60_RS03650;anticodon=(pos:complement(195419..195421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03650;product=tRNA-Trp
NZ_LAEX01000007.1	RefSeq	gene	195491	195566	.	-	.	ID=gene-TS60_RS03655;Name=TS60_RS03655;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03655;old_locus_tag=TS60_0775
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	195491	195566	.	-	.	ID=rna-TS60_RS03655;Parent=gene-TS60_RS03655;anticodon=(pos:complement(195531..195533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03655;product=tRNA-Trp
NZ_LAEX01000007.1	tRNAscan-SE	exon	195491	195566	.	-	.	ID=exon-TS60_RS03655-1;Parent=rna-TS60_RS03655;anticodon=(pos:complement(195531..195533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03655;product=tRNA-Trp
NZ_LAEX01000007.1	RefSeq	gene	195642	196106	.	-	.	ID=gene-TS60_RS03660;Name=TS60_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03660;old_locus_tag=TS60_0776
NZ_LAEX01000007.1	Protein Homology	CDS	195642	196106	.	-	0	ID=cds-WP_011166861.1;Parent=gene-TS60_RS03660;Dbxref=GenBank:WP_011166861.1;Name=WP_011166861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166861.1;locus_tag=TS60_RS03660;product=Fur family transcriptional regulator;protein_id=WP_011166861.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	196107	196328	.	-	.	ID=gene-TS60_RS03665;Name=TS60_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03665;old_locus_tag=TS60_0777
NZ_LAEX01000007.1	Protein Homology	CDS	196107	196328	.	-	0	ID=cds-WP_011166862.1;Parent=gene-TS60_RS03665;Dbxref=GenBank:WP_011166862.1;Name=WP_011166862.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166862.1;locus_tag=TS60_RS03665;product=acyl carrier protein;protein_id=WP_011166862.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	196352	196714	.	-	.	ID=gene-TS60_RS03670;Name=TS60_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03670;old_locus_tag=TS60_0778
NZ_LAEX01000007.1	Protein Homology	CDS	196352	196714	.	-	0	ID=cds-WP_011166863.1;Parent=gene-TS60_RS03670;Dbxref=GenBank:WP_011166863.1;Name=WP_011166863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862887.1;locus_tag=TS60_RS03670;product=hypothetical protein;protein_id=WP_011166863.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	196701	196838	.	-	.	ID=gene-TS60_RS07515;Name=TS60_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07515
NZ_LAEX01000007.1	Protein Homology	CDS	196701	196838	.	-	0	ID=cds-WP_011166864.1;Parent=gene-TS60_RS07515;Dbxref=GenBank:WP_011166864.1;Name=WP_011166864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166864.1;locus_tag=TS60_RS07515;product=hypothetical protein;protein_id=WP_011166864.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	197510	197770	.	-	.	ID=gene-TS60_RS07520;Name=TS60_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07520;old_locus_tag=TS60_0779
NZ_LAEX01000007.1	Protein Homology	CDS	197510	197770	.	-	0	ID=cds-WP_015545518.1;Parent=gene-TS60_RS07520;Dbxref=GenBank:WP_015545518.1;Name=WP_015545518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545518.1;locus_tag=TS60_RS07520;product=hypothetical protein;protein_id=WP_015545518.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	197870	197945	.	-	.	ID=gene-TS60_RS03680;Name=TS60_RS03680;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03680;old_locus_tag=TS60_0780
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	197870	197945	.	-	.	ID=rna-TS60_RS03680;Parent=gene-TS60_RS03680;anticodon=(pos:complement(197910..197912));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03680;product=tRNA-His
NZ_LAEX01000007.1	tRNAscan-SE	exon	197870	197945	.	-	.	ID=exon-TS60_RS03680-1;Parent=rna-TS60_RS03680;anticodon=(pos:complement(197910..197912));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03680;product=tRNA-His
NZ_LAEX01000007.1	RefSeq	gene	198264	200159	.	+	.	ID=gene-TS60_RS03685;Name=TS60_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03685;old_locus_tag=TS60_0781
NZ_LAEX01000007.1	Protein Homology	CDS	198264	200159	.	+	0	ID=cds-WP_011166866.1;Parent=gene-TS60_RS03685;Dbxref=GenBank:WP_011166866.1;Name=WP_011166866.1;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166866.1;locus_tag=TS60_RS03685;product=M13 family metallopeptidase;protein_id=WP_011166866.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	200890	202568	.	+	.	ID=gene-TS60_RS03695;Name=TS60_RS03695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS03695;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	200890	202568	.	+	0	ID=cds-TS60_RS03695;Parent=gene-TS60_RS03695;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03695;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	202837	204136	.	+	.	ID=gene-TS60_RS06055;Name=TS60_RS06055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06055;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	202837	204136	.	+	0	ID=cds-TS60_RS06055;Parent=gene-TS60_RS06055;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729261.1;locus_tag=TS60_RS06055;product=IS3 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	204110	205042	.	-	.	ID=gene-TS60_RS03715;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=TS60_RS03715;old_locus_tag=TS60_0788
NZ_LAEX01000007.1	Protein Homology	CDS	204110	205042	.	-	0	ID=cds-WP_015545551.1;Parent=gene-TS60_RS03715;Dbxref=GenBank:WP_015545551.1;Name=WP_015545551.1;Ontology_term=GO:0016310,GO:0019546,GO:0005524,GO:0008804;gbkey=CDS;gene=arcC;go_function=ATP binding|0005524||IEA,carbamate kinase activity|0008804||IEA;go_process=phosphorylation|0016310||IEA,L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862889.1;locus_tag=TS60_RS03715;product=carbamate kinase;protein_id=WP_015545551.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	205158	206252	.	-	.	ID=gene-TS60_RS03720;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=TS60_RS03720;old_locus_tag=TS60_0789
NZ_LAEX01000007.1	Protein Homology	CDS	205158	206252	.	-	0	ID=cds-WP_011166871.1;Parent=gene-TS60_RS03720;Dbxref=GenBank:WP_011166871.1;Name=WP_011166871.1;Ontology_term=GO:0009446,GO:0047632,GO:0005737;gbkey=CDS;gene=aguA;go_component=cytoplasm|0005737||IEA;go_function=agmatine deiminase activity|0047632||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387513.1;locus_tag=TS60_RS03720;product=agmatine deiminase;protein_id=WP_011166871.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	206259	206807	.	-	.	ID=gene-TS60_RS07705;Name=TS60_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07705;old_locus_tag=TS60_0790
NZ_LAEX01000007.1	Protein Homology	CDS	206259	206807	.	-	0	ID=cds-WP_015545516.1;Parent=gene-TS60_RS07705;Dbxref=GenBank:WP_015545516.1;Name=WP_015545516.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.6;locus_tag=TS60_RS07705;product=amino acid permease;protein_id=WP_015545516.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	206782	207675	.	-	.	ID=gene-TS60_RS07710;Name=TS60_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07710;old_locus_tag=TS60_0791
NZ_LAEX01000007.1	Protein Homology	CDS	206782	207675	.	-	0	ID=cds-WP_011166872.1;Parent=gene-TS60_RS07710;Dbxref=GenBank:WP_011166872.1;Name=WP_011166872.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.6;locus_tag=TS60_RS07710;product=APC family permease;protein_id=WP_011166872.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	207696	208793	.	-	.	ID=gene-TS60_RS03730;Name=ptcA;gbkey=Gene;gene=ptcA;gene_biotype=protein_coding;locus_tag=TS60_RS03730;old_locus_tag=TS60_0792
NZ_LAEX01000007.1	Protein Homology	CDS	207696	208793	.	-	0	ID=cds-WP_015545373.1;Parent=gene-TS60_RS03730;Dbxref=GenBank:WP_015545373.1;Name=WP_015545373.1;Ontology_term=GO:0033390,GO:0050231;gbkey=CDS;gene=ptcA;go_function=putrescine carbamoyltransferase activity|0050231||IEA;go_process=putrescine biosynthetic process from arginine via N-carbamoylputrescine|0033390||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545373.1;locus_tag=TS60_RS03730;product=putrescine carbamoyltransferase;protein_id=WP_015545373.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	209026	209913	.	+	.	ID=gene-TS60_RS03735;Name=TS60_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03735;old_locus_tag=TS60_0793
NZ_LAEX01000007.1	Protein Homology	CDS	209026	209913	.	+	0	ID=cds-WP_011166874.1;Parent=gene-TS60_RS03735;Dbxref=GenBank:WP_011166874.1;Name=WP_011166874.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447938.1;locus_tag=TS60_RS03735;product=ABC transporter ATP-binding protein;protein_id=WP_011166874.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	209915	210397	.	+	.	ID=gene-TS60_RS03740;Name=TS60_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03740;old_locus_tag=TS60_0794
NZ_LAEX01000007.1	Protein Homology	CDS	209915	210397	.	+	0	ID=cds-WP_011166875.1;Parent=gene-TS60_RS03740;Dbxref=GenBank:WP_011166875.1;Name=WP_011166875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166875.1;locus_tag=TS60_RS03740;product=hypothetical protein;protein_id=WP_011166875.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	210390	210677	.	+	.	ID=gene-TS60_RS03745;Name=TS60_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03745;old_locus_tag=TS60_0795
NZ_LAEX01000007.1	Protein Homology	CDS	210390	210677	.	+	0	ID=cds-WP_011166876.1;Parent=gene-TS60_RS03745;Dbxref=GenBank:WP_011166876.1;Name=WP_011166876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166876.1;locus_tag=TS60_RS03745;product=hypothetical protein;protein_id=WP_011166876.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	210709	211188	.	-	.	ID=gene-TS60_RS03750;Name=TS60_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03750;old_locus_tag=TS60_0796
NZ_LAEX01000007.1	Protein Homology	CDS	210709	211188	.	-	0	ID=cds-WP_011166877.1;Parent=gene-TS60_RS03750;Dbxref=GenBank:WP_011166877.1;Name=WP_011166877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166877.1;locus_tag=TS60_RS03750;product=hypothetical protein;protein_id=WP_011166877.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	211277	212839	.	-	.	ID=gene-TS60_RS03755;Name=TS60_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03755;old_locus_tag=TS60_0797
NZ_LAEX01000007.1	Protein Homology	CDS	211277	212839	.	-	0	ID=cds-WP_015545496.1;Parent=gene-TS60_RS03755;Dbxref=GenBank:WP_015545496.1;Name=WP_015545496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447943.1;locus_tag=TS60_RS03755;product=hypothetical protein;protein_id=WP_015545496.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	212906	215320	.	-	.	ID=gene-TS60_RS03760;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=TS60_RS03760;old_locus_tag=TS60_0798
NZ_LAEX01000007.1	Protein Homology	CDS	212906	215320	.	-	0	ID=cds-WP_015545302.1;Parent=gene-TS60_RS03760;Dbxref=GenBank:WP_015545302.1;Name=WP_015545302.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269612.1;locus_tag=TS60_RS03760;product=leucine--tRNA ligase;protein_id=WP_015545302.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	215457	215533	.	-	.	ID=gene-TS60_RS03765;Name=TS60_RS03765;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03765;old_locus_tag=TS60_0799
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	215457	215533	.	-	.	ID=rna-TS60_RS03765;Parent=gene-TS60_RS03765;anticodon=(pos:complement(215497..215499));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03765;product=tRNA-Ile
NZ_LAEX01000007.1	tRNAscan-SE	exon	215457	215533	.	-	.	ID=exon-TS60_RS03765-1;Parent=rna-TS60_RS03765;anticodon=(pos:complement(215497..215499));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03765;product=tRNA-Ile
NZ_LAEX01000007.1	RefSeq	gene	215606	218410	.	-	.	ID=gene-TS60_RS03770;Name=TS60_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03770;old_locus_tag=TS60_0800
NZ_LAEX01000007.1	Protein Homology	CDS	215606	218410	.	-	0	ID=cds-WP_045596608.1;Parent=gene-TS60_RS03770;Dbxref=GenBank:WP_045596608.1;Name=WP_045596608.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545568.1;locus_tag=TS60_RS03770;product=MOLPALP family lipoprotein;protein_id=WP_045596608.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	218569	218967	.	-	.	ID=gene-TS60_RS03775;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=TS60_RS03775;old_locus_tag=TS60_0801
NZ_LAEX01000007.1	Protein Homology	CDS	218569	218967	.	-	0	ID=cds-WP_011166882.1;Parent=gene-TS60_RS03775;Dbxref=GenBank:WP_011166882.1;Name=WP_011166882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729777.1;locus_tag=TS60_RS03775;product=30S ribosomal protein S9;protein_id=WP_011166882.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	218967	219422	.	-	.	ID=gene-TS60_RS03780;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=TS60_RS03780;old_locus_tag=TS60_0802
NZ_LAEX01000007.1	Protein Homology	CDS	218967	219422	.	-	0	ID=cds-WP_011166883.1;Parent=gene-TS60_RS03780;Dbxref=GenBank:WP_011166883.1;Name=WP_011166883.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387522.1;locus_tag=TS60_RS03780;product=50S ribosomal protein L13;protein_id=WP_011166883.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	219552	223697	.	-	.	ID=gene-TS60_RS03785;Name=TS60_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03785;old_locus_tag=TS60_0803
NZ_LAEX01000007.1	Protein Homology	CDS	219552	223697	.	-	0	ID=cds-WP_015545298.1;Parent=gene-TS60_RS03785;Dbxref=GenBank:WP_015545298.1;Name=WP_015545298.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862895.1;locus_tag=TS60_RS03785;product=ABC transporter permease;protein_id=WP_015545298.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	223792	224547	.	-	.	ID=gene-TS60_RS03790;Name=TS60_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03790;old_locus_tag=TS60_0804
NZ_LAEX01000007.1	Protein Homology	CDS	223792	224547	.	-	0	ID=cds-WP_045596612.1;Parent=gene-TS60_RS03790;Dbxref=GenBank:WP_045596612.1;Name=WP_045596612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862896.1;locus_tag=TS60_RS03790;product=tRNA pseudouridine synthase A;protein_id=WP_045596612.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	224550	225560	.	-	.	ID=gene-TS60_RS03795;Name=TS60_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03795;old_locus_tag=TS60_0805
NZ_LAEX01000007.1	Protein Homology	CDS	224550	225560	.	-	0	ID=cds-WP_011166886.1;Parent=gene-TS60_RS03795;Dbxref=GenBank:WP_011166886.1;Name=WP_011166886.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362463.1;locus_tag=TS60_RS03795;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_011166886.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	225574	226485	.	-	.	ID=gene-TS60_RS03800;Name=TS60_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03800;old_locus_tag=TS60_0806
NZ_LAEX01000007.1	Protein Homology	CDS	225574	226485	.	-	0	ID=cds-WP_011166887.1;Parent=gene-TS60_RS03800;Dbxref=GenBank:WP_011166887.1;Name=WP_011166887.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729782.1;locus_tag=TS60_RS03800;product=energy-coupling factor transporter ATPase;protein_id=WP_011166887.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	226473	227699	.	-	.	ID=gene-TS60_RS03805;Name=TS60_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03805;old_locus_tag=TS60_0807
NZ_LAEX01000007.1	Protein Homology	CDS	226473	227699	.	-	0	ID=cds-WP_011166888.1;Parent=gene-TS60_RS03805;Dbxref=GenBank:WP_011166888.1;Name=WP_011166888.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862899.1;locus_tag=TS60_RS03805;product=energy-coupling factor transporter ATPase;protein_id=WP_011166888.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	227936	229609	.	-	.	ID=gene-TS60_RS03810;Name=TS60_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03810;old_locus_tag=TS60_0808
NZ_LAEX01000007.1	Protein Homology	CDS	227936	229609	.	-	0	ID=cds-WP_011166528.1-4;Parent=gene-TS60_RS03810;Dbxref=GenBank:WP_011166528.1;Name=WP_011166528.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS03810;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166528.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	229769	230128	.	-	.	ID=gene-TS60_RS03815;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=TS60_RS03815;old_locus_tag=TS60_0809
NZ_LAEX01000007.1	Protein Homology	CDS	229769	230128	.	-	0	ID=cds-WP_011166889.1;Parent=gene-TS60_RS03815;Dbxref=GenBank:WP_011166889.1;Name=WP_011166889.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166889.1;locus_tag=TS60_RS03815;product=50S ribosomal protein L17;protein_id=WP_011166889.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	230148	231101	.	-	.	ID=gene-TS60_RS03820;Name=TS60_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03820;old_locus_tag=TS60_0810
NZ_LAEX01000007.1	Protein Homology	CDS	230148	231101	.	-	0	ID=cds-WP_011166890.1;Parent=gene-TS60_RS03820;Dbxref=GenBank:WP_011166890.1;Name=WP_011166890.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387528.1;locus_tag=TS60_RS03820;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_011166890.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	231105	231494	.	-	.	ID=gene-TS60_RS03825;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=TS60_RS03825;old_locus_tag=TS60_0811
NZ_LAEX01000007.1	Protein Homology	CDS	231105	231494	.	-	0	ID=cds-WP_008362476.1;Parent=gene-TS60_RS03825;Dbxref=GenBank:WP_008362476.1;Name=WP_008362476.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014034919.1;locus_tag=TS60_RS03825;product=30S ribosomal protein S11;protein_id=WP_008362476.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	231520	231885	.	-	.	ID=gene-TS60_RS03830;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=TS60_RS03830;old_locus_tag=TS60_0812
NZ_LAEX01000007.1	Protein Homology	CDS	231520	231885	.	-	0	ID=cds-WP_011166891.1;Parent=gene-TS60_RS03830;Dbxref=GenBank:WP_011166891.1;Name=WP_011166891.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183045.1;locus_tag=TS60_RS03830;product=30S ribosomal protein S13;protein_id=WP_011166891.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	231922	232035	.	-	.	ID=gene-TS60_RS06070;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=TS60_RS06070;old_locus_tag=TS60_0813
NZ_LAEX01000007.1	Protein Homology	CDS	231922	232035	.	-	0	ID=cds-WP_004429078.1;Parent=gene-TS60_RS06070;Dbxref=GenBank:WP_004429078.1;Name=WP_004429078.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004028447.1;locus_tag=TS60_RS06070;product=50S ribosomal protein L36;protein_id=WP_004429078.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	232104	232328	.	-	.	ID=gene-TS60_RS03835;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=TS60_RS03835;old_locus_tag=TS60_0814
NZ_LAEX01000007.1	Protein Homology	CDS	232104	232328	.	-	0	ID=cds-WP_011167188.1;Parent=gene-TS60_RS03835;Dbxref=GenBank:WP_011167188.1;Name=WP_011167188.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167188.1;locus_tag=TS60_RS03835;product=translation initiation factor IF-1;protein_id=WP_011167188.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	232340	233095	.	-	.	ID=gene-TS60_RS03840;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=TS60_RS03840;old_locus_tag=TS60_0815
NZ_LAEX01000007.1	Protein Homology	CDS	232340	233095	.	-	0	ID=cds-WP_011166892.1;Parent=gene-TS60_RS03840;Dbxref=GenBank:WP_011166892.1;Name=WP_011166892.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729785.1;locus_tag=TS60_RS03840;product=type I methionyl aminopeptidase;protein_id=WP_011166892.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	233095	233736	.	-	.	ID=gene-TS60_RS03845;Name=TS60_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03845;old_locus_tag=TS60_0816
NZ_LAEX01000007.1	Protein Homology	CDS	233095	233736	.	-	0	ID=cds-WP_011166893.1;Parent=gene-TS60_RS03845;Dbxref=GenBank:WP_011166893.1;Name=WP_011166893.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387531.1;locus_tag=TS60_RS03845;product=adenylate kinase;protein_id=WP_011166893.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	233864	235312	.	-	.	ID=gene-TS60_RS03850;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=TS60_RS03850;old_locus_tag=TS60_0817
NZ_LAEX01000007.1	Protein Homology	CDS	233864	235312	.	-	0	ID=cds-WP_011166894.1;Parent=gene-TS60_RS03850;Dbxref=GenBank:WP_011166894.1;Name=WP_011166894.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387532.1;locus_tag=TS60_RS03850;product=preprotein translocase subunit SecY;protein_id=WP_011166894.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	235312	235749	.	-	.	ID=gene-TS60_RS03855;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=TS60_RS03855;old_locus_tag=TS60_0818
NZ_LAEX01000007.1	Protein Homology	CDS	235312	235749	.	-	0	ID=cds-WP_011166895.1;Parent=gene-TS60_RS03855;Dbxref=GenBank:WP_011166895.1;Name=WP_011166895.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362500.1;locus_tag=TS60_RS03855;product=50S ribosomal protein L15;protein_id=WP_011166895.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	235768	236532	.	-	.	ID=gene-TS60_RS07850;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=TS60_RS07850;old_locus_tag=TS60_0819
NZ_LAEX01000007.1	Protein Homology	CDS	235768	236532	.	-	0	ID=cds-WP_011166896.1;Parent=gene-TS60_RS07850;Dbxref=GenBank:WP_011166896.1;Name=WP_011166896.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862901.1;locus_tag=TS60_RS07850;product=30S ribosomal protein S5;protein_id=WP_011166896.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	236551	236901	.	-	.	ID=gene-TS60_RS03865;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=TS60_RS03865;old_locus_tag=TS60_0820
NZ_LAEX01000007.1	Protein Homology	CDS	236551	236901	.	-	0	ID=cds-WP_011166897.1;Parent=gene-TS60_RS03865;Dbxref=GenBank:WP_011166897.1;Name=WP_011166897.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387535.1;locus_tag=TS60_RS03865;product=50S ribosomal protein L18;protein_id=WP_011166897.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	236927	237469	.	-	.	ID=gene-TS60_RS03870;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=TS60_RS03870;old_locus_tag=TS60_0821
NZ_LAEX01000007.1	Protein Homology	CDS	236927	237469	.	-	0	ID=cds-WP_011166898.1;Parent=gene-TS60_RS03870;Dbxref=GenBank:WP_011166898.1;Name=WP_011166898.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269626.1;locus_tag=TS60_RS03870;product=50S ribosomal protein L6;protein_id=WP_011166898.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	237483	237872	.	-	.	ID=gene-TS60_RS03875;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=TS60_RS03875;old_locus_tag=TS60_0822
NZ_LAEX01000007.1	Protein Homology	CDS	237483	237872	.	-	0	ID=cds-WP_013729790.1;Parent=gene-TS60_RS03875;Dbxref=GenBank:WP_013729790.1;Name=WP_013729790.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362508.1;locus_tag=TS60_RS03875;product=30S ribosomal protein S8;protein_id=WP_013729790.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	237892	238077	.	-	.	ID=gene-TS60_RS03880;Name=TS60_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03880;old_locus_tag=TS60_0823
NZ_LAEX01000007.1	Protein Homology	CDS	237892	238077	.	-	0	ID=cds-WP_008362512.1;Parent=gene-TS60_RS03880;Dbxref=GenBank:WP_008362512.1;Name=WP_008362512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183033.1;locus_tag=TS60_RS03880;product=type Z 30S ribosomal protein S14;protein_id=WP_008362512.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	238096	238638	.	-	.	ID=gene-TS60_RS03885;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=TS60_RS03885;old_locus_tag=TS60_0824
NZ_LAEX01000007.1	Protein Homology	CDS	238096	238638	.	-	0	ID=cds-WP_045596617.1;Parent=gene-TS60_RS03885;Dbxref=GenBank:WP_045596617.1;Name=WP_045596617.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387537.1;locus_tag=TS60_RS03885;product=50S ribosomal protein L5;protein_id=WP_045596617.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	238657	238983	.	-	.	ID=gene-TS60_RS03890;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=TS60_RS03890;old_locus_tag=TS60_0825
NZ_LAEX01000007.1	Protein Homology	CDS	238657	238983	.	-	0	ID=cds-WP_011166902.1;Parent=gene-TS60_RS03890;Dbxref=GenBank:WP_011166902.1;Name=WP_011166902.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269628.1;locus_tag=TS60_RS03890;product=50S ribosomal protein L24;protein_id=WP_011166902.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	238997	239365	.	-	.	ID=gene-TS60_RS03895;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=TS60_RS03895;old_locus_tag=TS60_0826
NZ_LAEX01000007.1	Protein Homology	CDS	238997	239365	.	-	0	ID=cds-WP_011166903.1;Parent=gene-TS60_RS03895;Dbxref=GenBank:WP_011166903.1;Name=WP_011166903.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429034.1;locus_tag=TS60_RS03895;product=50S ribosomal protein L14;protein_id=WP_011166903.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	239381	239638	.	-	.	ID=gene-TS60_RS03900;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=TS60_RS03900;old_locus_tag=TS60_0827
NZ_LAEX01000007.1	Protein Homology	CDS	239381	239638	.	-	0	ID=cds-WP_011166904.1;Parent=gene-TS60_RS03900;Dbxref=GenBank:WP_011166904.1;Name=WP_011166904.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587539.1;locus_tag=TS60_RS03900;product=30S ribosomal protein S17;protein_id=WP_011166904.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	239638	240054	.	-	.	ID=gene-TS60_RS03905;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=TS60_RS03905;old_locus_tag=TS60_0828
NZ_LAEX01000007.1	Protein Homology	CDS	239638	240054	.	-	0	ID=cds-WP_011166905.1;Parent=gene-TS60_RS03905;Dbxref=GenBank:WP_011166905.1;Name=WP_011166905.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387539.1;locus_tag=TS60_RS03905;product=50S ribosomal protein L29;protein_id=WP_011166905.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	240054	240467	.	-	.	ID=gene-TS60_RS03910;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=TS60_RS03910;old_locus_tag=TS60_0829
NZ_LAEX01000007.1	Protein Homology	CDS	240054	240467	.	-	0	ID=cds-WP_011387540.1;Parent=gene-TS60_RS03910;Dbxref=GenBank:WP_011387540.1;Name=WP_011387540.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166906.1;locus_tag=TS60_RS03910;product=50S ribosomal protein L16;protein_id=WP_011387540.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	240470	241171	.	-	.	ID=gene-TS60_RS03915;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=TS60_RS03915;old_locus_tag=TS60_0830
NZ_LAEX01000007.1	Protein Homology	CDS	240470	241171	.	-	0	ID=cds-WP_011166907.1;Parent=gene-TS60_RS03915;Dbxref=GenBank:WP_011166907.1;Name=WP_011166907.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166907.1;locus_tag=TS60_RS03915;product=30S ribosomal protein S3;protein_id=WP_011166907.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	241189	241524	.	-	.	ID=gene-TS60_RS03920;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=TS60_RS03920;old_locus_tag=TS60_0831
NZ_LAEX01000007.1	Protein Homology	CDS	241189	241524	.	-	0	ID=cds-WP_011166908.1;Parent=gene-TS60_RS03920;Dbxref=GenBank:WP_011166908.1;Name=WP_011166908.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362527.1;locus_tag=TS60_RS03920;product=50S ribosomal protein L22;protein_id=WP_011166908.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	241548	241814	.	-	.	ID=gene-TS60_RS03925;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=TS60_RS03925;old_locus_tag=TS60_0832
NZ_LAEX01000007.1	Protein Homology	CDS	241548	241814	.	-	0	ID=cds-WP_011166909.1;Parent=gene-TS60_RS03925;Dbxref=GenBank:WP_011166909.1;Name=WP_011166909.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166909.1;locus_tag=TS60_RS03925;product=30S ribosomal protein S19;protein_id=WP_011166909.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	241836	242684	.	-	.	ID=gene-TS60_RS03930;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=TS60_RS03930;old_locus_tag=TS60_0833
NZ_LAEX01000007.1	Protein Homology	CDS	241836	242684	.	-	0	ID=cds-WP_011166910.1;Parent=gene-TS60_RS03930;Dbxref=GenBank:WP_011166910.1;Name=WP_011166910.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362531.1;locus_tag=TS60_RS03930;product=50S ribosomal protein L2;protein_id=WP_011166910.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	242739	243023	.	-	.	ID=gene-TS60_RS03935;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=TS60_RS03935;old_locus_tag=TS60_0834
NZ_LAEX01000007.1	Protein Homology	CDS	242739	243023	.	-	0	ID=cds-WP_011166911.1;Parent=gene-TS60_RS03935;Dbxref=GenBank:WP_011166911.1;Name=WP_011166911.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269631.1;locus_tag=TS60_RS03935;product=50S ribosomal protein L23;protein_id=WP_011166911.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	243023	243649	.	-	.	ID=gene-TS60_RS03940;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=TS60_RS03940;old_locus_tag=TS60_0835
NZ_LAEX01000007.1	Protein Homology	CDS	243023	243649	.	-	0	ID=cds-WP_011166912.1;Parent=gene-TS60_RS03940;Dbxref=GenBank:WP_011166912.1;Name=WP_011166912.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729795.1;locus_tag=TS60_RS03940;product=50S ribosomal protein L4;protein_id=WP_011166912.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	243662	244333	.	-	.	ID=gene-TS60_RS03945;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=TS60_RS03945;old_locus_tag=TS60_0836
NZ_LAEX01000007.1	Protein Homology	CDS	243662	244333	.	-	0	ID=cds-WP_011166913.1;Parent=gene-TS60_RS03945;Dbxref=GenBank:WP_011166913.1;Name=WP_011166913.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166913.1;locus_tag=TS60_RS03945;product=50S ribosomal protein L3;protein_id=WP_011166913.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	244409	244717	.	-	.	ID=gene-TS60_RS03950;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=TS60_RS03950;old_locus_tag=TS60_0837
NZ_LAEX01000007.1	Protein Homology	CDS	244409	244717	.	-	0	ID=cds-WP_011166914.1;Parent=gene-TS60_RS03950;Dbxref=GenBank:WP_011166914.1;Name=WP_011166914.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362538.1;locus_tag=TS60_RS03950;product=30S ribosomal protein S10;protein_id=WP_011166914.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	244969	245967	.	-	.	ID=gene-TS60_RS03955;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=TS60_RS03955;old_locus_tag=TS60_0838
NZ_LAEX01000007.1	Protein Homology	CDS	244969	245967	.	-	0	ID=cds-WP_011166915.1;Parent=gene-TS60_RS03955;Dbxref=GenBank:WP_011166915.1;Name=WP_011166915.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698326.1;locus_tag=TS60_RS03955;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_011166915.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	246073	247701	.	-	.	ID=gene-TS60_RS03960;Name=TS60_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03960;old_locus_tag=TS60_0839
NZ_LAEX01000007.1	Protein Homology	CDS	246073	247701	.	-	0	ID=cds-WP_039275732.1;Parent=gene-TS60_RS03960;Dbxref=GenBank:WP_039275732.1;Name=WP_039275732.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863094.1;locus_tag=TS60_RS03960;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_039275732.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	247709	249256	.	-	.	ID=gene-TS60_RS03965;Name=TS60_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03965;old_locus_tag=TS60_0840
NZ_LAEX01000007.1	Protein Homology	CDS	247709	249256	.	-	0	ID=cds-WP_015545411.1;Parent=gene-TS60_RS03965;Dbxref=GenBank:WP_015545411.1;Name=WP_015545411.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862905.1;locus_tag=TS60_RS03965;product=PTS transporter subunit EIIC;protein_id=WP_015545411.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	249321	250307	.	-	.	ID=gene-TS60_RS03970;Name=TS60_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03970;old_locus_tag=TS60_0841
NZ_LAEX01000007.1	Protein Homology	CDS	249321	250307	.	-	0	ID=cds-WP_045596621.1;Parent=gene-TS60_RS03970;Dbxref=GenBank:WP_045596621.1;Name=WP_045596621.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545281.1;locus_tag=TS60_RS03970;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_045596621.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	250297	250560	.	-	.	ID=gene-TS60_RS03975;Name=TS60_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03975;old_locus_tag=TS60_0842
NZ_LAEX01000007.1	Protein Homology	CDS	250297	250560	.	-	0	ID=cds-WP_011166920.1;Parent=gene-TS60_RS03975;Dbxref=GenBank:WP_011166920.1;Name=WP_011166920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04570.1;locus_tag=TS60_RS03975;product=TIGR04570 family membrane protein;protein_id=WP_011166920.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	250689	250856	.	+	.	ID=gene-TS60_RS03980;Name=TS60_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03980;old_locus_tag=TS60_0843
NZ_LAEX01000007.1	Protein Homology	CDS	250689	250856	.	+	0	ID=cds-WP_011166921.1;Parent=gene-TS60_RS03980;Dbxref=GenBank:WP_011166921.1;Name=WP_011166921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166921.1;locus_tag=TS60_RS03980;product=hypothetical protein;protein_id=WP_011166921.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	250937	251581	.	+	.	ID=gene-TS60_RS03985;Name=TS60_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS03985;old_locus_tag=TS60_0844
NZ_LAEX01000007.1	Protein Homology	CDS	250937	251581	.	+	0	ID=cds-WP_011166922.1;Parent=gene-TS60_RS03985;Dbxref=GenBank:WP_011166922.1;Name=WP_011166922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166922.1;locus_tag=TS60_RS03985;product=hypothetical protein;protein_id=WP_011166922.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	251824	251899	.	-	.	ID=gene-TS60_RS03990;Name=TS60_RS03990;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03990;old_locus_tag=TS60_0845
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	251824	251899	.	-	.	ID=rna-TS60_RS03990;Parent=gene-TS60_RS03990;anticodon=(pos:complement(251864..251866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03990;product=tRNA-Thr
NZ_LAEX01000007.1	tRNAscan-SE	exon	251824	251899	.	-	.	ID=exon-TS60_RS03990-1;Parent=rna-TS60_RS03990;anticodon=(pos:complement(251864..251866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03990;product=tRNA-Thr
NZ_LAEX01000007.1	RefSeq	gene	251912	251987	.	-	.	ID=gene-TS60_RS03995;Name=TS60_RS03995;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS03995;old_locus_tag=TS60_0846
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	251912	251987	.	-	.	ID=rna-TS60_RS03995;Parent=gene-TS60_RS03995;anticodon=(pos:complement(251952..251954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03995;product=tRNA-Val
NZ_LAEX01000007.1	tRNAscan-SE	exon	251912	251987	.	-	.	ID=exon-TS60_RS03995-1;Parent=rna-TS60_RS03995;anticodon=(pos:complement(251952..251954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS03995;product=tRNA-Val
NZ_LAEX01000007.1	RefSeq	gene	251995	252070	.	-	.	ID=gene-TS60_RS04000;Name=TS60_RS04000;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04000;old_locus_tag=TS60_0847
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	251995	252070	.	-	.	ID=rna-TS60_RS04000;Parent=gene-TS60_RS04000;anticodon=(pos:complement(252035..252037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04000;product=tRNA-Glu
NZ_LAEX01000007.1	tRNAscan-SE	exon	251995	252070	.	-	.	ID=exon-TS60_RS04000-1;Parent=rna-TS60_RS04000;anticodon=(pos:complement(252035..252037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04000;product=tRNA-Glu
NZ_LAEX01000007.1	RefSeq	gene	252078	252153	.	-	.	ID=gene-TS60_RS04005;Name=TS60_RS04005;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04005;old_locus_tag=TS60_0848
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	252078	252153	.	-	.	ID=rna-TS60_RS04005;Parent=gene-TS60_RS04005;anticodon=(pos:complement(252118..252120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04005;product=tRNA-Asn
NZ_LAEX01000007.1	tRNAscan-SE	exon	252078	252153	.	-	.	ID=exon-TS60_RS04005-1;Parent=rna-TS60_RS04005;anticodon=(pos:complement(252118..252120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04005;product=tRNA-Asn
NZ_LAEX01000007.1	RefSeq	gene	252254	252853	.	-	.	ID=gene-TS60_RS07530;Name=TS60_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07530;old_locus_tag=TS60_0849
NZ_LAEX01000007.1	Protein Homology	CDS	252254	252853	.	-	0	ID=cds-WP_227716922.1;Parent=gene-TS60_RS07530;Dbxref=GenBank:WP_227716922.1;Name=WP_227716922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.6;locus_tag=TS60_RS07530;product=BspA family leucine-rich repeat surface protein;protein_id=WP_227716922.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	252801	252959	.	+	.	ID=gene-TS60_RS07535;Name=TS60_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07535
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	252801	252959	.	+	0	ID=cds-WP_158423311.1;Parent=gene-TS60_RS07535;Dbxref=GenBank:WP_158423311.1;Name=WP_158423311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07535;product=hypothetical protein;protein_id=WP_158423311.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	253328	254089	.	-	.	ID=gene-TS60_RS04015;Name=TS60_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04015;old_locus_tag=TS60_0850
NZ_LAEX01000007.1	Protein Homology	CDS	253328	254089	.	-	0	ID=cds-WP_011166925.1;Parent=gene-TS60_RS04015;Dbxref=GenBank:WP_011166925.1;Name=WP_011166925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862909.1;locus_tag=TS60_RS04015;product=tetraspanin family protein;protein_id=WP_011166925.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	254079	254945	.	-	.	ID=gene-TS60_RS04020;Name=TS60_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04020;old_locus_tag=TS60_0851
NZ_LAEX01000007.1	Protein Homology	CDS	254079	254945	.	-	0	ID=cds-WP_015545610.1;Parent=gene-TS60_RS04020;Dbxref=GenBank:WP_015545610.1;Name=WP_015545610.1;Ontology_term=GO:0006164,GO:0006730,GO:0009086,GO:0003824,GO:0004488,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA,hydrolase activity|0016787||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,one-carbon metabolic process|0006730||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447977.1;locus_tag=TS60_RS04020;product=bifunctional 5%2C10-methylenetetrahydrofolate dehydrogenase/5%2C10-methenyltetrahydrofolate cyclohydrolase;protein_id=WP_015545610.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	254954	256555	.	-	.	ID=gene-TS60_RS04025;Name=TS60_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04025;old_locus_tag=TS60_0852
NZ_LAEX01000007.1	Protein Homology	CDS	254954	256555	.	-	0	ID=cds-WP_015545563.1;Parent=gene-TS60_RS04025;Dbxref=GenBank:WP_015545563.1;Name=WP_015545563.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387551.1;locus_tag=TS60_RS04025;product=potassium transporter TrkG;protein_id=WP_015545563.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	256634	257359	.	+	.	ID=gene-TS60_RS04030;Name=TS60_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04030;old_locus_tag=TS60_0853
NZ_LAEX01000007.1	Protein Homology	CDS	256634	257359	.	+	0	ID=cds-WP_045596623.1;Parent=gene-TS60_RS04030;Dbxref=GenBank:WP_045596623.1;Name=WP_045596623.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166928.1;locus_tag=TS60_RS04030;product=potassium channel family protein;protein_id=WP_045596623.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	257392	258831	.	-	.	ID=gene-TS60_RS04035;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=TS60_RS04035;old_locus_tag=TS60_0854
NZ_LAEX01000007.1	Protein Homology	CDS	257392	258831	.	-	0	ID=cds-WP_015545356.1;Parent=gene-TS60_RS04035;Dbxref=GenBank:WP_015545356.1;Name=WP_015545356.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862912.1;locus_tag=TS60_RS04035;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_015545356.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	258833	260290	.	-	.	ID=gene-TS60_RS04040;Name=TS60_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04040;old_locus_tag=TS60_0855
NZ_LAEX01000007.1	Protein Homology	CDS	258833	260290	.	-	0	ID=cds-WP_011166930.1;Parent=gene-TS60_RS04040;Dbxref=GenBank:WP_011166930.1;Name=WP_011166930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862913.1;locus_tag=TS60_RS04040;product=amidase family protein;protein_id=WP_011166930.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	260290	260586	.	-	.	ID=gene-TS60_RS04045;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=TS60_RS04045;old_locus_tag=TS60_0856
NZ_LAEX01000007.1	Protein Homology	CDS	260290	260586	.	-	0	ID=cds-WP_011166931.1;Parent=gene-TS60_RS04045;Dbxref=GenBank:WP_011166931.1;Name=WP_011166931.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387555.1;locus_tag=TS60_RS04045;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_011166931.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	260588	262594	.	-	.	ID=gene-TS60_RS04050;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=TS60_RS04050;old_locus_tag=TS60_0857
NZ_LAEX01000007.1	Protein Homology	CDS	260588	262594	.	-	0	ID=cds-WP_011166932.1;Parent=gene-TS60_RS04050;Dbxref=GenBank:WP_011166932.1;Name=WP_011166932.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698316.1;locus_tag=TS60_RS04050;product=NAD-dependent DNA ligase LigA;protein_id=WP_011166932.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	262598	264619	.	-	.	ID=gene-TS60_RS04055;Name=TS60_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04055;old_locus_tag=TS60_0858
NZ_LAEX01000007.1	Protein Homology	CDS	262598	264619	.	-	0	ID=cds-WP_011166933.1;Parent=gene-TS60_RS04055;Dbxref=GenBank:WP_011166933.1;Name=WP_011166933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166933.1;locus_tag=TS60_RS04055;product=hypothetical protein;protein_id=WP_011166933.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	264622	265530	.	-	.	ID=gene-TS60_RS04060;Name=TS60_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04060;old_locus_tag=TS60_0859
NZ_LAEX01000007.1	Protein Homology	CDS	264622	265530	.	-	0	ID=cds-WP_011166934.1;Parent=gene-TS60_RS04060;Dbxref=GenBank:WP_011166934.1;Name=WP_011166934.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729815.1;locus_tag=TS60_RS04060;product=RluA family pseudouridine synthase;protein_id=WP_011166934.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	265533	266501	.	-	.	ID=gene-TS60_RS04065;Name=TS60_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04065;old_locus_tag=TS60_0860
NZ_LAEX01000007.1	Protein Homology	CDS	265533	266501	.	-	0	ID=cds-WP_011166935.1;Parent=gene-TS60_RS04065;Dbxref=GenBank:WP_011166935.1;Name=WP_011166935.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862917.1;locus_tag=TS60_RS04065;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_011166935.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	266558	266827	.	-	.	ID=gene-TS60_RS04070;Name=TS60_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04070;old_locus_tag=TS60_0861
NZ_LAEX01000007.1	Protein Homology	CDS	266558	266827	.	-	0	ID=cds-WP_011166936.1;Parent=gene-TS60_RS04070;Dbxref=GenBank:WP_011166936.1;Name=WP_011166936.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862918.1;locus_tag=TS60_RS04070;product=HPr family phosphocarrier protein;protein_id=WP_011166936.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	266892	269060	.	-	.	ID=gene-TS60_RS04075;Name=TS60_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04075;old_locus_tag=TS60_0862
NZ_LAEX01000007.1	Protein Homology	CDS	266892	269060	.	-	0	ID=cds-WP_011166937.1;Parent=gene-TS60_RS04075;Dbxref=GenBank:WP_011166937.1;Name=WP_011166937.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862919.1;locus_tag=TS60_RS04075;product=ATP-dependent helicase;protein_id=WP_011166937.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	269077	269832	.	-	.	ID=gene-TS60_RS04080;Name=TS60_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04080;old_locus_tag=TS60_0863
NZ_LAEX01000007.1	Protein Homology	CDS	269077	269832	.	-	0	ID=cds-WP_011166938.1;Parent=gene-TS60_RS04080;Dbxref=GenBank:WP_011166938.1;Name=WP_011166938.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729819.1;locus_tag=TS60_RS04080;product=RDD family protein;protein_id=WP_011166938.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	269832	270788	.	-	.	ID=gene-TS60_RS04085;Name=TS60_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04085;old_locus_tag=TS60_0864
NZ_LAEX01000007.1	Protein Homology	CDS	269832	270788	.	-	0	ID=cds-WP_011166939.1;Parent=gene-TS60_RS04085;Dbxref=GenBank:WP_011166939.1;Name=WP_011166939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166939.1;locus_tag=TS60_RS04085;product=glycosyltransferase family A protein;protein_id=WP_011166939.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	271077	271394	.	-	.	ID=gene-TS60_RS07540;Name=TS60_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07540;old_locus_tag=TS60_0865
NZ_LAEX01000007.1	Protein Homology	CDS	271077	271394	.	-	0	ID=cds-WP_011166940.1;Parent=gene-TS60_RS07540;Dbxref=GenBank:WP_011166940.1;Name=WP_011166940.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.6;locus_tag=TS60_RS07540;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166940.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	271400	271933	.	-	.	ID=gene-TS60_RS07545;Name=TS60_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07545;old_locus_tag=TS60_0866
NZ_LAEX01000007.1	Protein Homology	CDS	271400	271933	.	-	0	ID=cds-WP_011166941.1;Parent=gene-TS60_RS07545;Dbxref=GenBank:WP_011166941.1;Name=WP_011166941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166941.1;locus_tag=TS60_RS07545;product=hypothetical protein;protein_id=WP_011166941.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	271975	272235	.	-	.	ID=gene-TS60_RS07975;Name=TS60_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07975
NZ_LAEX01000007.1	Protein Homology	CDS	271975	272235	.	-	0	ID=cds-WP_394296902.1;Parent=gene-TS60_RS07975;Dbxref=GenBank:WP_394296902.1;Name=WP_394296902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045726.2;locus_tag=TS60_RS07975;product=Vmc-like lipoprotein signal peptide domain-containing protein;protein_id=WP_394296902.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	272267	273196	.	-	.	ID=gene-TS60_RS04100;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=TS60_RS04100;old_locus_tag=TS60_0867
NZ_LAEX01000007.1	Protein Homology	CDS	272267	273196	.	-	0	ID=cds-WP_011166942.1;Parent=gene-TS60_RS04100;Dbxref=GenBank:WP_011166942.1;Name=WP_011166942.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862923.1;locus_tag=TS60_RS04100;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_011166942.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	273311	275494	.	-	.	ID=gene-TS60_RS04105;Name=TS60_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04105;old_locus_tag=TS60_0868
NZ_LAEX01000007.1	Protein Homology	CDS	273311	275494	.	-	0	ID=cds-WP_011166943.1;Parent=gene-TS60_RS04105;Dbxref=GenBank:WP_011166943.1;Name=WP_011166943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_265498390.1;locus_tag=TS60_RS04105;product=MSC_0775 family lipoprotein;protein_id=WP_011166943.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	275742	278090	.	-	.	ID=gene-TS60_RS04110;Name=TS60_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04110;old_locus_tag=TS60_0869
NZ_LAEX01000007.1	Protein Homology	CDS	275742	278090	.	-	0	ID=cds-WP_011166944.1;Parent=gene-TS60_RS04110;Dbxref=GenBank:WP_011166944.1;Name=WP_011166944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_278308000.1;locus_tag=TS60_RS04110;product=MSC_0775 family lipoprotein;protein_id=WP_011166944.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	278099	279001	.	-	.	ID=gene-TS60_RS04115;Name=TS60_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04115;old_locus_tag=TS60_0870
NZ_LAEX01000007.1	Protein Homology	CDS	278099	279001	.	-	0	ID=cds-WP_011166945.1;Parent=gene-TS60_RS04115;Dbxref=GenBank:WP_011166945.1;Name=WP_011166945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862926.1;locus_tag=TS60_RS04115;product=MAG4940 family membrane protein;protein_id=WP_011166945.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	279138	279446	.	-	.	ID=gene-TS60_RS07550;Name=TS60_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07550
NZ_LAEX01000007.1	Protein Homology	CDS	279138	279446	.	-	0	ID=cds-WP_080512671.1;Parent=gene-TS60_RS07550;Dbxref=GenBank:WP_080512671.1;Name=WP_080512671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019151.6;locus_tag=TS60_RS07550;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_080512671.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	279436	280980	.	-	.	ID=gene-TS60_RS04120;Name=TS60_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04120;old_locus_tag=TS60_0871
NZ_LAEX01000007.1	Protein Homology	CDS	279436	280980	.	-	0	ID=cds-WP_011166946.1;Parent=gene-TS60_RS04120;Dbxref=GenBank:WP_011166946.1;Name=WP_011166946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166946.1;locus_tag=TS60_RS04120;product=DUF262 domain-containing protein;protein_id=WP_011166946.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	280983	281561	.	-	.	ID=gene-TS60_RS04125;Name=TS60_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04125;old_locus_tag=TS60_0872
NZ_LAEX01000007.1	Protein Homology	CDS	280983	281561	.	-	0	ID=cds-WP_011166947.1;Parent=gene-TS60_RS04125;Dbxref=GenBank:WP_011166947.1;Name=WP_011166947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448000.1;locus_tag=TS60_RS04125;product=hypothetical protein;protein_id=WP_011166947.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	281564	282403	.	-	.	ID=gene-TS60_RS04130;Name=TS60_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04130;old_locus_tag=TS60_0873
NZ_LAEX01000007.1	Protein Homology	CDS	281564	282403	.	-	0	ID=cds-WP_015545618.1;Parent=gene-TS60_RS04130;Dbxref=GenBank:WP_015545618.1;Name=WP_015545618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545618.1;locus_tag=TS60_RS04130;product=hypothetical protein;protein_id=WP_015545618.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	282485	283896	.	-	.	ID=gene-TS60_RS04135;Name=TS60_RS04135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04135;old_locus_tag=TS60_0874;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	282485	283896	.	-	0	ID=cds-TS60_RS04135;Parent=gene-TS60_RS04135;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS04135;product=IS1634-like element ISMmy1 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	284642	286534	.	-	.	ID=gene-TS60_RS04145;Name=TS60_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04145;old_locus_tag=TS60_0876
NZ_LAEX01000007.1	Protein Homology	CDS	284642	286534	.	-	0	ID=cds-WP_015545388.1;Parent=gene-TS60_RS04145;Dbxref=GenBank:WP_015545388.1;Name=WP_015545388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045981.1;locus_tag=TS60_RS04145;product=MSC_0775 family lipoprotein;protein_id=WP_015545388.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	286546	287445	.	-	.	ID=gene-TS60_RS04150;Name=TS60_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04150;old_locus_tag=TS60_0877
NZ_LAEX01000007.1	Protein Homology	CDS	286546	287445	.	-	0	ID=cds-WP_015545262.1;Parent=gene-TS60_RS04150;Dbxref=GenBank:WP_015545262.1;Name=WP_015545262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387572.1;locus_tag=TS60_RS04150;product=MAG4940 family membrane protein;protein_id=WP_015545262.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	287561	289234	.	+	.	ID=gene-TS60_RS04155;Name=TS60_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04155;old_locus_tag=TS60_0878
NZ_LAEX01000007.1	Protein Homology	CDS	287561	289234	.	+	0	ID=cds-WP_011166953.1;Parent=gene-TS60_RS04155;Dbxref=GenBank:WP_011166953.1;Name=WP_011166953.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04155;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166953.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	289275	289418	.	-	.	ID=gene-TS60_RS06905;Name=TS60_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06905;old_locus_tag=TS60_0879
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	289275	289418	.	-	0	ID=cds-WP_158423312.1;Parent=gene-TS60_RS06905;Dbxref=GenBank:WP_158423312.1;Name=WP_158423312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS06905;product=hypothetical protein;protein_id=WP_158423312.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	289572	290980	.	+	.	ID=gene-TS60_RS06695;Name=TS60_RS06695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06695;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	289572	290980	.	+	0	ID=cds-TS60_RS06695;Parent=gene-TS60_RS06695;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06695;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	290918	292750	.	-	.	ID=gene-TS60_RS04175;Name=TS60_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04175;old_locus_tag=TS60_0883
NZ_LAEX01000007.1	Protein Homology	CDS	290918	292750	.	-	0	ID=cds-WP_039275742.1;Parent=gene-TS60_RS04175;Dbxref=GenBank:WP_039275742.1;Name=WP_039275742.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166954.1;locus_tag=TS60_RS04175;product=ABC transporter permease subunit;protein_id=WP_039275742.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	292714	293463	.	-	.	ID=gene-TS60_RS04180;Name=TS60_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04180;old_locus_tag=TS60_0884
NZ_LAEX01000007.1	Protein Homology	CDS	292714	293463	.	-	0	ID=cds-WP_011166955.1;Parent=gene-TS60_RS04180;Dbxref=GenBank:WP_011166955.1;Name=WP_011166955.1;Ontology_term=GO:0005524,GO:0015416,GO:0016887,GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729833.1;locus_tag=TS60_RS04180;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_011166955.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	293474	294907	.	-	.	ID=gene-TS60_RS04185;Name=cypl;gbkey=Gene;gene=cypl;gene_biotype=protein_coding;locus_tag=TS60_RS04185;old_locus_tag=TS60_0885
NZ_LAEX01000007.1	Protein Homology	CDS	293474	294907	.	-	0	ID=cds-WP_011166967.1;Parent=gene-TS60_RS04185;Dbxref=GenBank:WP_011166967.1;Name=WP_011166967.1;Ontology_term=GO:0030976,GO:0009897;gbkey=CDS;gene=cypl;go_component=external side of plasma membrane|0009897||IEA;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166967.1;locus_tag=TS60_RS04185;product=ABC transporter thiamine pyrophosphate-binding lipoprotein p37/Cypl;protein_id=WP_011166967.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	295130	295992	.	-	.	ID=gene-TS60_RS07855;Name=TS60_RS07855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07855;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	295130	295992	.	-	0	ID=cds-TS60_RS07855;Parent=gene-TS60_RS07855;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448008.1;locus_tag=TS60_RS07855;product=HAD family hydrolase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	296435	297313	.	+	.	ID=gene-TS60_RS04195;Name=TS60_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04195;old_locus_tag=TS60_0888
NZ_LAEX01000007.1	Protein Homology	CDS	296435	297313	.	+	0	ID=cds-WP_329955257.1;Parent=gene-TS60_RS04195;Dbxref=GenBank:WP_329955257.1;Name=WP_329955257.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=TS60_RS04195;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_329955257.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	297323	297724	.	+	.	ID=gene-TS60_RS04200;Name=TS60_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04200;old_locus_tag=TS60_0889
NZ_LAEX01000007.1	Protein Homology	CDS	297323	297724	.	+	0	ID=cds-WP_011166961.1;Parent=gene-TS60_RS04200;Dbxref=GenBank:WP_011166961.1;Name=WP_011166961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729837.1;locus_tag=TS60_RS04200;product=RidA family protein;protein_id=WP_011166961.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	297844	299277	.	-	.	ID=gene-TS60_RS04205;Name=TS60_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04205;old_locus_tag=TS60_0890
NZ_LAEX01000007.1	Protein Homology	CDS	297844	299277	.	-	0	ID=cds-WP_045596627.1;Parent=gene-TS60_RS04205;Dbxref=GenBank:WP_045596627.1;Name=WP_045596627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS04205;product=IS4 family transposase;protein_id=WP_045596627.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	299688	301361	.	-	.	ID=gene-TS60_RS04215;Name=TS60_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04215;old_locus_tag=TS60_0891
NZ_LAEX01000007.1	Protein Homology	CDS	299688	301361	.	-	0	ID=cds-WP_011166963.1;Parent=gene-TS60_RS04215;Dbxref=GenBank:WP_011166963.1;Name=WP_011166963.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04215;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166963.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	301613	303990	.	-	.	ID=gene-TS60_RS04220;Name=TS60_RS04220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04220;old_locus_tag=TS60_0892;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	301613	303990	.	-	0	ID=cds-TS60_RS04220;Parent=gene-TS60_RS04220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387571.1;locus_tag=TS60_RS04220;product=MSC_0775 family lipoprotein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	304002	304900	.	-	.	ID=gene-TS60_RS04230;Name=TS60_RS04230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04230;old_locus_tag=TS60_0894;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	304002	304900	.	-	0	ID=cds-TS60_RS04230;Parent=gene-TS60_RS04230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046011.1;locus_tag=TS60_RS04230;product=MAG4940 family membrane protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	304945	306747	.	-	.	ID=gene-TS60_RS04235;Name=TS60_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04235;old_locus_tag=TS60_0895
NZ_LAEX01000007.1	Protein Homology	CDS	304945	306747	.	-	0	ID=cds-WP_015545597.1;Parent=gene-TS60_RS04235;Dbxref=GenBank:WP_015545597.1;Name=WP_015545597.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545597.1;locus_tag=TS60_RS04235;product=ABC transporter permease subunit;protein_id=WP_015545597.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	306859	308532	.	-	.	ID=gene-TS60_RS04240;Name=TS60_RS04240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04240;old_locus_tag=TS60_0896;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	306859	308532	.	-	0	ID=cds-TS60_RS04240;Parent=gene-TS60_RS04240;Note=internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04240;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	308656	309405	.	-	.	ID=gene-TS60_RS04245;Name=TS60_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04245;old_locus_tag=TS60_0897
NZ_LAEX01000007.1	Protein Homology	CDS	308656	309405	.	-	0	ID=cds-WP_045596631.1;Parent=gene-TS60_RS04245;Dbxref=GenBank:WP_045596631.1;Name=WP_045596631.1;Ontology_term=GO:0005524,GO:0015416,GO:0016887,GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729833.1;locus_tag=TS60_RS04245;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_045596631.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	309416	310888	.	-	.	ID=gene-TS60_RS04250;Name=cypl;gbkey=Gene;gene=cypl;gene_biotype=protein_coding;locus_tag=TS60_RS04250;old_locus_tag=TS60_0898
NZ_LAEX01000007.1	Protein Homology	CDS	309416	310888	.	-	0	ID=cds-WP_011166956.1;Parent=gene-TS60_RS04250;Dbxref=GenBank:WP_011166956.1;Name=WP_011166956.1;Ontology_term=GO:0030976,GO:0009897;gbkey=CDS;gene=cypl;go_component=external side of plasma membrane|0009897||IEA;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166956.1;locus_tag=TS60_RS04250;product=ABC transporter thiamine pyrophosphate-binding lipoprotein p37/Cypl;protein_id=WP_011166956.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	311111	311974	.	-	.	ID=gene-TS60_RS04255;Name=TS60_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04255;old_locus_tag=TS60_0899
NZ_LAEX01000007.1	Protein Homology	CDS	311111	311974	.	-	0	ID=cds-WP_011166968.1;Parent=gene-TS60_RS04255;Dbxref=GenBank:WP_011166968.1;Name=WP_011166968.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448008.1;locus_tag=TS60_RS04255;product=HAD family hydrolase;protein_id=WP_011166968.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	312106	313296	.	+	.	ID=gene-TS60_RS04260;Name=TS60_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04260;old_locus_tag=TS60_0900
NZ_LAEX01000007.1	Protein Homology	CDS	312106	313296	.	+	0	ID=cds-WP_011166960.1;Parent=gene-TS60_RS04260;Dbxref=GenBank:WP_011166960.1;Name=WP_011166960.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166969.1;locus_tag=TS60_RS04260;product=MalY/PatB family protein;protein_id=WP_011166960.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	313306	313707	.	+	.	ID=gene-TS60_RS04265;Name=TS60_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04265;old_locus_tag=TS60_0901
NZ_LAEX01000007.1	Protein Homology	CDS	313306	313707	.	+	0	ID=cds-WP_011166961.1-2;Parent=gene-TS60_RS04265;Dbxref=GenBank:WP_011166961.1;Name=WP_011166961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729837.1;locus_tag=TS60_RS04265;product=RidA family protein;protein_id=WP_011166961.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	313827	315239	.	-	.	ID=gene-TS60_RS04270;Name=TS60_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04270;old_locus_tag=TS60_0902
NZ_LAEX01000007.1	Protein Homology	CDS	313827	315239	.	-	0	ID=cds-WP_045596633.1;Parent=gene-TS60_RS04270;Dbxref=GenBank:WP_045596633.1;Name=WP_045596633.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS04270;product=IS1634-like element ISMmy1 family transposase;protein_id=WP_045596633.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	315441	316756	.	-	.	ID=gene-TS60_RS04285;Name=TS60_RS04285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04285;old_locus_tag=TS60_0904;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	315441	316756	.	-	0	ID=cds-TS60_RS04285;Parent=gene-TS60_RS04285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448011.1;locus_tag=TS60_RS04285;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	316974	318497	.	-	.	ID=gene-TS60_RS04290;Name=TS60_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04290;old_locus_tag=TS60_0905
NZ_LAEX01000007.1	Protein Homology	CDS	316974	318497	.	-	0	ID=cds-WP_011166972.1;Parent=gene-TS60_RS04290;Dbxref=GenBank:WP_011166972.1;Name=WP_011166972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166972.1;locus_tag=TS60_RS04290;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166972.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	318787	320460	.	+	.	ID=gene-TS60_RS04295;Name=TS60_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04295;old_locus_tag=TS60_0906
NZ_LAEX01000007.1	Protein Homology	CDS	318787	320460	.	+	0	ID=cds-WP_011166528.1-5;Parent=gene-TS60_RS04295;Dbxref=GenBank:WP_011166528.1;Name=WP_011166528.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04295;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166528.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	320591	322030	.	-	.	ID=gene-TS60_RS04300;Name=TS60_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04300;old_locus_tag=TS60_0907
NZ_LAEX01000007.1	Protein Homology	CDS	320591	322030	.	-	0	ID=cds-WP_015545624.1;Parent=gene-TS60_RS04300;Dbxref=GenBank:WP_015545624.1;Name=WP_015545624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166973.1;locus_tag=TS60_RS04300;product=Myrrcad domain-containing protein;protein_id=WP_015545624.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	322238	323678	.	-	.	ID=gene-TS60_RS04305;Name=TS60_RS04305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04305;old_locus_tag=TS60_0908;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	322238	323678	.	-	0	ID=cds-TS60_RS04305;Parent=gene-TS60_RS04305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166973.1;locus_tag=TS60_RS04305;product=Myrrcad domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	323821	324970	.	+	.	ID=gene-TS60_RS06715;Name=TS60_RS06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06715;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	323821	324970	.	+	0	ID=cds-TS60_RS06715;Parent=gene-TS60_RS06715;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448014.1;locus_tag=TS60_RS06715;product=alpha/beta hydrolase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	325165	325241	.	+	.	ID=gene-TS60_RS04315;Name=TS60_RS04315;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04315;old_locus_tag=TS60_0911
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325165	325241	.	+	.	ID=rna-TS60_RS04315;Parent=gene-TS60_RS04315;anticodon=(pos:325199..325201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04315;product=tRNA-Arg
NZ_LAEX01000007.1	tRNAscan-SE	exon	325165	325241	.	+	.	ID=exon-TS60_RS04315-1;Parent=rna-TS60_RS04315;anticodon=(pos:325199..325201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04315;product=tRNA-Arg
NZ_LAEX01000007.1	RefSeq	gene	325289	325365	.	+	.	ID=gene-TS60_RS04320;Name=TS60_RS04320;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04320;old_locus_tag=TS60_0912
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325289	325365	.	+	.	ID=rna-TS60_RS04320;Parent=gene-TS60_RS04320;anticodon=(pos:325323..325325);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04320;product=tRNA-Pro
NZ_LAEX01000007.1	tRNAscan-SE	exon	325289	325365	.	+	.	ID=exon-TS60_RS04320-1;Parent=rna-TS60_RS04320;anticodon=(pos:325323..325325);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04320;product=tRNA-Pro
NZ_LAEX01000007.1	RefSeq	gene	325376	325451	.	+	.	ID=gene-TS60_RS04325;Name=TS60_RS04325;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04325;old_locus_tag=TS60_0913
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325376	325451	.	+	.	ID=rna-TS60_RS04325;Parent=gene-TS60_RS04325;anticodon=(pos:325409..325411);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04325;product=tRNA-Ala
NZ_LAEX01000007.1	tRNAscan-SE	exon	325376	325451	.	+	.	ID=exon-TS60_RS04325-1;Parent=rna-TS60_RS04325;anticodon=(pos:325409..325411);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04325;product=tRNA-Ala
NZ_LAEX01000007.1	RefSeq	gene	325457	325533	.	+	.	ID=gene-TS60_RS04330;Name=TS60_RS04330;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04330;old_locus_tag=TS60_0914
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325457	325533	.	+	.	ID=rna-TS60_RS04330;Parent=gene-TS60_RS04330;anticodon=(pos:325491..325493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04330;product=tRNA-Met
NZ_LAEX01000007.1	tRNAscan-SE	exon	325457	325533	.	+	.	ID=exon-TS60_RS04330-1;Parent=rna-TS60_RS04330;anticodon=(pos:325491..325493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04330;product=tRNA-Met
NZ_LAEX01000007.1	RefSeq	gene	325545	325621	.	+	.	ID=gene-TS60_RS04335;Name=TS60_RS04335;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04335;old_locus_tag=TS60_0915
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325545	325621	.	+	.	ID=rna-TS60_RS04335;Parent=gene-TS60_RS04335;anticodon=(pos:325579..325581);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04335;product=tRNA-Ile
NZ_LAEX01000007.1	tRNAscan-SE	exon	325545	325621	.	+	.	ID=exon-TS60_RS04335-1;Parent=rna-TS60_RS04335;anticodon=(pos:325579..325581);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04335;product=tRNA-Ile
NZ_LAEX01000007.1	RefSeq	gene	325664	325756	.	+	.	ID=gene-TS60_RS04340;Name=TS60_RS04340;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04340;old_locus_tag=TS60_0916
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325664	325756	.	+	.	ID=rna-TS60_RS04340;Parent=gene-TS60_RS04340;anticodon=(pos:325700..325702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04340;product=tRNA-Ser
NZ_LAEX01000007.1	tRNAscan-SE	exon	325664	325756	.	+	.	ID=exon-TS60_RS04340-1;Parent=rna-TS60_RS04340;anticodon=(pos:325700..325702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04340;product=tRNA-Ser
NZ_LAEX01000007.1	RefSeq	gene	325779	325854	.	+	.	ID=gene-TS60_RS04345;Name=TS60_RS04345;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04345;old_locus_tag=TS60_0917
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325779	325854	.	+	.	ID=rna-TS60_RS04345;Parent=gene-TS60_RS04345;anticodon=(pos:325812..325814);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04345;product=tRNA-Met
NZ_LAEX01000007.1	tRNAscan-SE	exon	325779	325854	.	+	.	ID=exon-TS60_RS04345-1;Parent=rna-TS60_RS04345;anticodon=(pos:325812..325814);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04345;product=tRNA-Met
NZ_LAEX01000007.1	RefSeq	gene	325857	325933	.	+	.	ID=gene-TS60_RS04350;Name=TS60_RS04350;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04350;old_locus_tag=TS60_0918
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325857	325933	.	+	.	ID=rna-TS60_RS04350;Parent=gene-TS60_RS04350;anticodon=(pos:325891..325893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04350;product=tRNA-Asp
NZ_LAEX01000007.1	tRNAscan-SE	exon	325857	325933	.	+	.	ID=exon-TS60_RS04350-1;Parent=rna-TS60_RS04350;anticodon=(pos:325891..325893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04350;product=tRNA-Asp
NZ_LAEX01000007.1	RefSeq	gene	325942	326017	.	+	.	ID=gene-TS60_RS04355;Name=TS60_RS04355;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS04355;old_locus_tag=TS60_0919
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	325942	326017	.	+	.	ID=rna-TS60_RS04355;Parent=gene-TS60_RS04355;anticodon=(pos:325975..325977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04355;product=tRNA-Phe
NZ_LAEX01000007.1	tRNAscan-SE	exon	325942	326017	.	+	.	ID=exon-TS60_RS04355-1;Parent=rna-TS60_RS04355;anticodon=(pos:325975..325977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS04355;product=tRNA-Phe
NZ_LAEX01000007.1	RefSeq	gene	326124	326858	.	+	.	ID=gene-TS60_RS04360;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=TS60_RS04360;old_locus_tag=TS60_0920
NZ_LAEX01000007.1	Protein Homology	CDS	326124	326858	.	+	0	ID=cds-WP_011166981.1;Parent=gene-TS60_RS04360;Dbxref=GenBank:WP_011166981.1;Name=WP_011166981.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448015.1;locus_tag=TS60_RS04360;product=glucosamine-6-phosphate deaminase;protein_id=WP_011166981.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	327008	328681	.	+	.	ID=gene-TS60_RS04365;Name=TS60_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04365;old_locus_tag=TS60_0921
NZ_LAEX01000007.1	Protein Homology	CDS	327008	328681	.	+	0	ID=cds-WP_011166982.1;Parent=gene-TS60_RS04365;Dbxref=GenBank:WP_011166982.1;Name=WP_011166982.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04365;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166982.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	328872	329618	.	+	.	ID=gene-TS60_RS04370;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=TS60_RS04370;old_locus_tag=TS60_0922
NZ_LAEX01000007.1	Protein Homology	CDS	328872	329618	.	+	0	ID=cds-WP_011166983.1;Parent=gene-TS60_RS04370;Dbxref=GenBank:WP_011166983.1;Name=WP_011166983.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862940.1;locus_tag=TS60_RS04370;product=triose-phosphate isomerase;protein_id=WP_011166983.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	329611	330447	.	+	.	ID=gene-TS60_RS04375;Name=TS60_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04375;old_locus_tag=TS60_0923
NZ_LAEX01000007.1	Protein Homology	CDS	329611	330447	.	+	0	ID=cds-WP_015545680.1;Parent=gene-TS60_RS04375;Dbxref=GenBank:WP_015545680.1;Name=WP_015545680.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862941.1;locus_tag=TS60_RS04375;product=HAD-IIB family hydrolase;protein_id=WP_015545680.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	330450	332046	.	+	.	ID=gene-TS60_RS04380;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=pseudogene;locus_tag=TS60_RS04380;old_locus_tag=TS60_0925;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	330450	332046	.	+	0	ID=cds-TS60_RS04380;Parent=gene-TS60_RS04380;Note=frameshifted;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862942.1;locus_tag=TS60_RS04380;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	332144	332752	.	+	.	ID=gene-TS60_RS04385;Name=TS60_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04385;old_locus_tag=TS60_0926
NZ_LAEX01000007.1	Protein Homology	CDS	332144	332752	.	+	0	ID=cds-WP_011166986.1;Parent=gene-TS60_RS04385;Dbxref=GenBank:WP_011166986.1;Name=WP_011166986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698288.1;locus_tag=TS60_RS04385;product=DUF6088 family protein;protein_id=WP_011166986.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	332745	333746	.	+	.	ID=gene-TS60_RS04390;Name=TS60_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04390;old_locus_tag=TS60_0927
NZ_LAEX01000007.1	Protein Homology	CDS	332745	333746	.	+	0	ID=cds-WP_015545474.1;Parent=gene-TS60_RS04390;Dbxref=GenBank:WP_015545474.1;Name=WP_015545474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698287.1;locus_tag=TS60_RS04390;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_015545474.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	333812	334480	.	-	.	ID=gene-TS60_RS04395;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=TS60_RS04395;old_locus_tag=TS60_0928
NZ_LAEX01000007.1	Protein Homology	CDS	333812	334480	.	-	0	ID=cds-WP_015545363.1;Parent=gene-TS60_RS04395;Dbxref=GenBank:WP_015545363.1;Name=WP_015545363.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862945.1;locus_tag=TS60_RS04395;product=deoxyribose-phosphate aldolase;protein_id=WP_015545363.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	334492	336168	.	-	.	ID=gene-TS60_RS04400;Name=TS60_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04400;old_locus_tag=TS60_0929
NZ_LAEX01000007.1	Protein Homology	CDS	334492	336168	.	-	0	ID=cds-WP_011166989.1;Parent=gene-TS60_RS04400;Dbxref=GenBank:WP_011166989.1;Name=WP_011166989.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862946.1;locus_tag=TS60_RS04400;product=phospho-sugar mutase;protein_id=WP_011166989.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	336330	337643	.	+	.	ID=gene-TS60_RS04405;Name=TS60_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04405;old_locus_tag=TS60_0930
NZ_LAEX01000007.1	Protein Homology	CDS	336330	337643	.	+	0	ID=cds-WP_015545572.1;Parent=gene-TS60_RS04405;Dbxref=GenBank:WP_015545572.1;Name=WP_015545572.1;Ontology_term=GO:0006206;gbkey=CDS;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862947.1;locus_tag=TS60_RS04405;product=thymidine phosphorylase;protein_id=WP_015545572.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	337720	339756	.	-	.	ID=gene-TS60_RS04410;Name=TS60_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04410;old_locus_tag=TS60_0931
NZ_LAEX01000007.1	Protein Homology	CDS	337720	339756	.	-	0	ID=cds-WP_039275757.1;Parent=gene-TS60_RS04410;Dbxref=GenBank:WP_039275757.1;Name=WP_039275757.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545567.1;locus_tag=TS60_RS04410;product=PTS fructose transporter subunit IIABC;protein_id=WP_039275757.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	339759	340694	.	-	.	ID=gene-TS60_RS04415;Name=TS60_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04415;old_locus_tag=TS60_0932
NZ_LAEX01000007.1	Protein Homology	CDS	339759	340694	.	-	0	ID=cds-WP_011166992.1;Parent=gene-TS60_RS04415;Dbxref=GenBank:WP_011166992.1;Name=WP_011166992.1;Ontology_term=GO:0005524,GO:0008662;gbkey=CDS;go_function=ATP binding|0005524||IEA,1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448135.1;locus_tag=TS60_RS04415;product=1-phosphofructokinase;protein_id=WP_011166992.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	340694	341392	.	-	.	ID=gene-TS60_RS04420;Name=TS60_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04420;old_locus_tag=TS60_0933
NZ_LAEX01000007.1	Protein Homology	CDS	340694	341392	.	-	0	ID=cds-WP_011166993.1;Parent=gene-TS60_RS04420;Dbxref=GenBank:WP_011166993.1;Name=WP_011166993.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166993.1;locus_tag=TS60_RS04420;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011166993.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	341544	342524	.	+	.	ID=gene-TS60_RS04425;Name=TS60_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04425;old_locus_tag=TS60_0934
NZ_LAEX01000007.1	Protein Homology	CDS	341544	342524	.	+	0	ID=cds-WP_015545659.1;Parent=gene-TS60_RS04425;Dbxref=GenBank:WP_015545659.1;Name=WP_015545659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166994.1;locus_tag=TS60_RS04425;product=hypothetical protein;protein_id=WP_015545659.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	342727	343380	.	+	.	ID=gene-TS60_RS04430;Name=TS60_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04430;old_locus_tag=TS60_0935
NZ_LAEX01000007.1	Protein Homology	CDS	342727	343380	.	+	0	ID=cds-WP_011166995.1;Parent=gene-TS60_RS04430;Dbxref=GenBank:WP_011166995.1;Name=WP_011166995.1;Ontology_term=GO:0009116,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862957.1;locus_tag=TS60_RS04430;product=phosphorylase family protein;protein_id=WP_011166995.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	343427	343891	.	-	.	ID=gene-TS60_RS04435;Name=TS60_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04435;old_locus_tag=TS60_0936
NZ_LAEX01000007.1	Protein Homology	CDS	343427	343891	.	-	0	ID=cds-WP_013448131.1;Parent=gene-TS60_RS04435;Dbxref=GenBank:WP_013448131.1;Name=WP_013448131.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729860.1;locus_tag=TS60_RS04435;product=helix-turn-helix domain-containing protein;protein_id=WP_013448131.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	343946	344851	.	-	.	ID=gene-TS60_RS04440;Name=TS60_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04440;old_locus_tag=TS60_0937
NZ_LAEX01000007.1	Protein Homology	CDS	343946	344851	.	-	0	ID=cds-WP_011166996.1;Parent=gene-TS60_RS04440;Dbxref=GenBank:WP_011166996.1;Name=WP_011166996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698279.1;locus_tag=TS60_RS04440;product=alpha/beta fold hydrolase;protein_id=WP_011166996.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	345232	345804	.	+	.	ID=gene-TS60_RS04445;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=TS60_RS04445;old_locus_tag=TS60_0938
NZ_LAEX01000007.1	Protein Homology	CDS	345232	345804	.	+	0	ID=cds-WP_011166997.1;Parent=gene-TS60_RS04445;Dbxref=GenBank:WP_011166997.1;Name=WP_011166997.1;Ontology_term=GO:0018117,GO:0042803,GO:0070733;gbkey=CDS;gene=fic;go_function=protein homodimerization activity|0042803||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698276.1;locus_tag=TS60_RS04445;product=protein adenylyltransferase Fic;protein_id=WP_011166997.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	346180	347265	.	-	.	ID=gene-TS60_RS04450;Name=TS60_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04450;old_locus_tag=TS60_0939
NZ_LAEX01000007.1	Protein Homology	CDS	346180	347265	.	-	0	ID=cds-WP_015545472.1;Parent=gene-TS60_RS04450;Dbxref=GenBank:WP_015545472.1;Name=WP_015545472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862965.1;locus_tag=TS60_RS04450;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_015545472.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	347267	348655	.	-	.	ID=gene-TS60_RS04455;Name=TS60_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04455;old_locus_tag=TS60_0940
NZ_LAEX01000007.1	Protein Homology	CDS	347267	348655	.	-	0	ID=cds-WP_045596641.1;Parent=gene-TS60_RS04455;Dbxref=GenBank:WP_045596641.1;Name=WP_045596641.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448126.1;locus_tag=TS60_RS04455;product=glycoside hydrolase family 1 protein;protein_id=WP_045596641.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	348648	349526	.	-	.	ID=gene-TS60_RS04460;Name=TS60_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04460;old_locus_tag=TS60_0941
NZ_LAEX01000007.1	Protein Homology	CDS	348648	349526	.	-	0	ID=cds-WP_015545536.1;Parent=gene-TS60_RS04460;Dbxref=GenBank:WP_015545536.1;Name=WP_015545536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729869.1;locus_tag=TS60_RS04460;product=ROK family protein;protein_id=WP_015545536.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	349528	349986	.	-	.	ID=gene-TS60_RS04465;Name=TS60_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04465;old_locus_tag=TS60_0942
NZ_LAEX01000007.1	Protein Homology	CDS	349528	349986	.	-	0	ID=cds-WP_011167001.1;Parent=gene-TS60_RS04465;Dbxref=GenBank:WP_011167001.1;Name=WP_011167001.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584604.1;locus_tag=TS60_RS04465;product=PTS sugar transporter subunit IIA;protein_id=WP_011167001.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	349995	350318	.	-	.	ID=gene-TS60_RS07580;Name=TS60_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07580
NZ_LAEX01000007.1	Protein Homology	CDS	349995	350318	.	-	0	ID=cds-WP_309255142.1;Parent=gene-TS60_RS07580;Dbxref=GenBank:WP_309255142.1;Name=WP_309255142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036773.6;locus_tag=TS60_RS07580;product=glycosyl hydrolase-related protein;protein_id=WP_309255142.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	350352	351763	.	+	.	ID=gene-TS60_RS06730;Name=TS60_RS06730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06730;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	350352	351763	.	+	0	ID=cds-TS60_RS06730;Parent=gene-TS60_RS06730;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06730;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	351771	354149	.	-	.	ID=gene-TS60_RS04480;Name=TS60_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04480;old_locus_tag=TS60_0946
NZ_LAEX01000007.1	Protein Homology	CDS	351771	354149	.	-	0	ID=cds-WP_011167003.1;Parent=gene-TS60_RS04480;Dbxref=GenBank:WP_011167003.1;Name=WP_011167003.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167003.1;locus_tag=TS60_RS04480;product=glycoside hydrolase family 38 N-terminal domain-containing protein;protein_id=WP_011167003.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	354161	356002	.	-	.	ID=gene-TS60_RS04485;Name=TS60_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04485;old_locus_tag=TS60_0947
NZ_LAEX01000007.1	Protein Homology	CDS	354161	356002	.	-	0	ID=cds-WP_015545286.1;Parent=gene-TS60_RS04485;Dbxref=GenBank:WP_015545286.1;Name=WP_015545286.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862970.1;locus_tag=TS60_RS04485;product=PTS fructose transporter subunit IIC;protein_id=WP_015545286.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	356017	356790	.	-	.	ID=gene-TS60_RS04490;Name=TS60_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04490;old_locus_tag=TS60_0948
NZ_LAEX01000007.1	Protein Homology	CDS	356017	356790	.	-	0	ID=cds-WP_011167005.1;Parent=gene-TS60_RS04490;Dbxref=GenBank:WP_011167005.1;Name=WP_011167005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448121.1;locus_tag=TS60_RS04490;product=hypothetical protein;protein_id=WP_011167005.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	356956	357507	.	-	.	ID=gene-TS60_RS04495;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=TS60_RS04495;old_locus_tag=TS60_0949
NZ_LAEX01000007.1	Protein Homology	CDS	356956	357507	.	-	0	ID=cds-WP_011167006.1;Parent=gene-TS60_RS04495;Dbxref=GenBank:WP_011167006.1;Name=WP_011167006.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269674.1;locus_tag=TS60_RS04495;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011167006.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	357543	358841	.	-	.	ID=gene-TS60_RS04500;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=TS60_RS04500;old_locus_tag=TS60_0950
NZ_LAEX01000007.1	Protein Homology	CDS	357543	358841	.	-	0	ID=cds-WP_015545429.1;Parent=gene-TS60_RS04500;Dbxref=GenBank:WP_015545429.1;Name=WP_015545429.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862972.1;locus_tag=TS60_RS04500;product=adenylosuccinate lyase;protein_id=WP_015545429.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	358834	360132	.	-	.	ID=gene-TS60_RS04505;Name=TS60_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04505;old_locus_tag=TS60_0951
NZ_LAEX01000007.1	Protein Homology	CDS	358834	360132	.	-	0	ID=cds-WP_011167008.1;Parent=gene-TS60_RS04505;Dbxref=GenBank:WP_011167008.1;Name=WP_011167008.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167008.1;locus_tag=TS60_RS04505;product=adenylosuccinate synthase;protein_id=WP_011167008.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	360327	361737	.	+	.	ID=gene-TS60_RS06735;Name=TS60_RS06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06735;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	360327	361737	.	+	0	ID=cds-TS60_RS06735;Parent=gene-TS60_RS06735;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06735;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	361836	363998	.	-	.	ID=gene-TS60_RS04525;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=TS60_RS04525;old_locus_tag=TS60_0955
NZ_LAEX01000007.1	Protein Homology	CDS	361836	363998	.	-	0	ID=cds-WP_015545587.1;Parent=gene-TS60_RS04525;Dbxref=GenBank:WP_015545587.1;Name=WP_015545587.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447463.1;locus_tag=TS60_RS04525;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_015545587.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	363985	364458	.	-	.	ID=gene-TS60_RS04530;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=TS60_RS04530;old_locus_tag=TS60_0956
NZ_LAEX01000007.1	Protein Homology	CDS	363985	364458	.	-	0	ID=cds-WP_045596645.1;Parent=gene-TS60_RS04530;Dbxref=GenBank:WP_045596645.1;Name=WP_045596645.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362672.1;locus_tag=TS60_RS04530;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_045596645.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	364467	365486	.	-	.	ID=gene-TS60_RS04535;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=TS60_RS04535;old_locus_tag=TS60_0957
NZ_LAEX01000007.1	Protein Homology	CDS	364467	365486	.	-	0	ID=cds-WP_011167011.1;Parent=gene-TS60_RS04535;Dbxref=GenBank:WP_011167011.1;Name=WP_011167011.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269128.1;locus_tag=TS60_RS04535;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_011167011.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	365788	366072	.	+	.	ID=gene-TS60_RS04540;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=TS60_RS04540;old_locus_tag=TS60_0958
NZ_LAEX01000007.1	Protein Homology	CDS	365788	366072	.	+	0	ID=cds-WP_013729883.1;Parent=gene-TS60_RS04540;Dbxref=GenBank:WP_013729883.1;Name=WP_013729883.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729883.1;locus_tag=TS60_RS04540;product=preprotein translocase subunit SecG;protein_id=WP_013729883.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	366108	368222	.	+	.	ID=gene-TS60_RS04545;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=TS60_RS04545;old_locus_tag=TS60_0959
NZ_LAEX01000007.1	Protein Homology	CDS	366108	368222	.	+	0	ID=cds-WP_011167012.1;Parent=gene-TS60_RS04545;Dbxref=GenBank:WP_011167012.1;Name=WP_011167012.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862980.1;locus_tag=TS60_RS04545;product=ribonuclease R;protein_id=WP_011167012.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	368232	368678	.	+	.	ID=gene-TS60_RS04550;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=TS60_RS04550;old_locus_tag=TS60_0960
NZ_LAEX01000007.1	Protein Homology	CDS	368232	368678	.	+	0	ID=cds-WP_011167013.1;Parent=gene-TS60_RS04550;Dbxref=GenBank:WP_011167013.1;Name=WP_011167013.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167013.1;locus_tag=TS60_RS04550;product=SsrA-binding protein SmpB;protein_id=WP_011167013.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	368678	369160	.	+	.	ID=gene-TS60_RS04555;Name=TS60_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04555;old_locus_tag=TS60_0961
NZ_LAEX01000007.1	Protein Homology	CDS	368678	369160	.	+	0	ID=cds-WP_011167014.1;Parent=gene-TS60_RS04555;Dbxref=GenBank:WP_011167014.1;Name=WP_011167014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862981.1;locus_tag=TS60_RS04555;product=hypothetical protein;protein_id=WP_011167014.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	369348	371021	.	+	.	ID=gene-TS60_RS04560;Name=TS60_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04560;old_locus_tag=TS60_0962
NZ_LAEX01000007.1	Protein Homology	CDS	369348	371021	.	+	0	ID=cds-WP_045596649.1;Parent=gene-TS60_RS04560;Dbxref=GenBank:WP_045596649.1;Name=WP_045596649.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04560;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596649.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	371164	371415	.	+	.	ID=gene-TS60_RS04565;Name=TS60_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04565;old_locus_tag=TS60_0963
NZ_LAEX01000007.1	Protein Homology	CDS	371164	371415	.	+	0	ID=cds-WP_011167027.1;Parent=gene-TS60_RS04565;Dbxref=GenBank:WP_011167027.1;Name=WP_011167027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167027.1;locus_tag=TS60_RS04565;product=hypothetical protein;protein_id=WP_011167027.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	371465	373495	.	+	.	ID=gene-TS60_RS04570;Name=TS60_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04570;old_locus_tag=TS60_0964
NZ_LAEX01000007.1	Protein Homology	CDS	371465	373495	.	+	0	ID=cds-WP_045596651.1;Parent=gene-TS60_RS04570;Dbxref=GenBank:WP_045596651.1;Name=WP_045596651.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167016.1;locus_tag=TS60_RS04570;product=PTS transporter subunit EIIC;protein_id=WP_045596651.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	373473	373664	.	+	.	ID=gene-TS60_RS07980;Name=TS60_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07980;old_locus_tag=TS60_0965
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	373473	373664	.	+	0	ID=cds-WP_039275770.1;Parent=gene-TS60_RS07980;Dbxref=GenBank:WP_039275770.1;Name=WP_039275770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07980;product=hypothetical protein;protein_id=WP_039275770.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	373759	374800	.	+	.	ID=gene-TS60_RS04580;Name=TS60_RS04580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04580;old_locus_tag=TS60_0966;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	373759	374800	.	+	0	ID=cds-TS60_RS04580;Parent=gene-TS60_RS04580;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269123.1;locus_tag=TS60_RS04580;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	374895	375131	.	+	.	ID=gene-TS60_RS07720;Name=TS60_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07720;old_locus_tag=TS60_0967
NZ_LAEX01000007.1	Protein Homology	CDS	374895	375131	.	+	0	ID=cds-WP_015545425.1;Parent=gene-TS60_RS07720;Dbxref=GenBank:WP_015545425.1;Name=WP_015545425.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012692.6;locus_tag=TS60_RS07720;product=ROK family protein;protein_id=WP_015545425.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	375134	375862	.	+	.	ID=gene-TS60_RS04590;Name=TS60_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04590;old_locus_tag=TS60_0968
NZ_LAEX01000007.1	Protein Homology	CDS	375134	375862	.	+	0	ID=cds-WP_011167030.1;Parent=gene-TS60_RS04590;Dbxref=GenBank:WP_011167030.1;Name=WP_011167030.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167030.1;locus_tag=TS60_RS04590;product=ROK family protein;protein_id=WP_011167030.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	376073	377746	.	-	.	ID=gene-TS60_RS04595;Name=TS60_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04595;old_locus_tag=TS60_0969
NZ_LAEX01000007.1	Protein Homology	CDS	376073	377746	.	-	0	ID=cds-WP_011167031.1;Parent=gene-TS60_RS04595;Dbxref=GenBank:WP_011167031.1;Name=WP_011167031.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04595;product=IS1634-like element IS1634 family transposase;protein_id=WP_011167031.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	377838	378743	.	-	.	ID=gene-TS60_RS04600;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=TS60_RS04600;old_locus_tag=TS60_0970
NZ_LAEX01000007.1	Protein Homology	CDS	377838	378743	.	-	0	ID=cds-WP_011167032.1;Parent=gene-TS60_RS04600;Dbxref=GenBank:WP_011167032.1;Name=WP_011167032.1;Ontology_term=GO:0016310,GO:0019546,GO:0005524,GO:0008804;gbkey=CDS;gene=arcC;go_function=ATP binding|0005524||IEA,carbamate kinase activity|0008804||IEA;go_process=phosphorylation|0016310||IEA,L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167032.1;locus_tag=TS60_RS04600;product=carbamate kinase;protein_id=WP_011167032.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	378756	379079	.	-	.	ID=gene-TS60_RS04605;Name=TS60_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04605;old_locus_tag=TS60_0971
NZ_LAEX01000007.1	Protein Homology	CDS	378756	379079	.	-	0	ID=cds-WP_011167033.1;Parent=gene-TS60_RS04605;Dbxref=GenBank:WP_011167033.1;Name=WP_011167033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167033.1;locus_tag=TS60_RS04605;product=membrane arginine transporter;protein_id=WP_011167033.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	379123	379287	.	-	.	ID=gene-TS60_RS04610;Name=TS60_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04610;old_locus_tag=TS60_0972
NZ_LAEX01000007.1	Protein Homology	CDS	379123	379287	.	-	0	ID=cds-WP_011167021.1;Parent=gene-TS60_RS04610;Dbxref=GenBank:WP_011167021.1;Name=WP_011167021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167021.1;locus_tag=TS60_RS04610;product=hypothetical protein;protein_id=WP_011167021.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	379376	379843	.	-	.	ID=gene-TS60_RS07060;Name=TS60_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07060
NZ_LAEX01000007.1	Protein Homology	CDS	379376	379843	.	-	0	ID=cds-WP_211202783.1;Parent=gene-TS60_RS07060;Dbxref=GenBank:WP_211202783.1;Name=WP_211202783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.6;locus_tag=TS60_RS07060;product=hypothetical protein;protein_id=WP_211202783.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	380147	382975	.	-	.	ID=gene-TS60_RS04620;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=TS60_RS04620;old_locus_tag=TS60_0973
NZ_LAEX01000007.1	Protein Homology	CDS	380147	382975	.	-	0	ID=cds-WP_015545520.1;Parent=gene-TS60_RS04620;Dbxref=GenBank:WP_015545520.1;Name=WP_015545520.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269119.1;locus_tag=TS60_RS04620;product=magnesium-translocating P-type ATPase;protein_id=WP_015545520.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	383300	384459	.	+	.	ID=gene-TS60_RS04625;Name=TS60_RS04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04625;old_locus_tag=TS60_0974;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	383300	384459	.	+	0	ID=cds-TS60_RS04625;Parent=gene-TS60_RS04625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545271.1;locus_tag=TS60_RS04625;product=MSC_0882 family membrane protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	384500	385594	.	-	.	ID=gene-TS60_RS06120;Name=TS60_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06120;old_locus_tag=TS60_0975
NZ_LAEX01000007.1	Protein Homology	CDS	384500	385594	.	-	0	ID=cds-WP_457602202.1;Parent=gene-TS60_RS06120;Dbxref=GenBank:WP_457602202.1;Name=WP_457602202.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033559.2;locus_tag=TS60_RS06120;product=IS1634 family transposase;protein_id=WP_457602202.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	385500	386174	.	-	.	ID=gene-TS60_RS08000;Name=TS60_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS08000;old_locus_tag=TS60_0976
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	385500	386174	.	-	0	ID=cds-WP_045596657.1;Parent=gene-TS60_RS08000;Dbxref=GenBank:WP_045596657.1;Name=WP_045596657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS08000;product=hypothetical protein;protein_id=WP_045596657.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	386339	386590	.	+	.	ID=gene-TS60_RS04640;Name=TS60_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04640;old_locus_tag=TS60_0977
NZ_LAEX01000007.1	Protein Homology	CDS	386339	386590	.	+	0	ID=cds-WP_011167027.1-2;Parent=gene-TS60_RS04640;Dbxref=GenBank:WP_011167027.1;Name=WP_011167027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167027.1;locus_tag=TS60_RS04640;product=hypothetical protein;protein_id=WP_011167027.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	386691	388838	.	+	.	ID=gene-TS60_RS04645;Name=TS60_RS04645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04645;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	386691	388838	.	+	0	ID=cds-TS60_RS04645;Parent=gene-TS60_RS04645;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729888.1;locus_tag=TS60_RS04645;product=PTS transporter subunit EIIC;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	388933	389974	.	+	.	ID=gene-TS60_RS04655;Name=TS60_RS04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04655;old_locus_tag=TS60_0981;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	388933	389974	.	+	0	ID=cds-TS60_RS04655;Parent=gene-TS60_RS04655;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269123.1;locus_tag=TS60_RS04655;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	390069	390203	.	+	.	ID=gene-TS60_RS07725;Name=TS60_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07725;old_locus_tag=TS60_0982
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	390069	390203	.	+	0	ID=cds-WP_015545539.1;Parent=gene-TS60_RS07725;Dbxref=GenBank:WP_015545539.1;Name=WP_015545539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07725;product=hypothetical protein;protein_id=WP_015545539.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	390244	391917	.	-	.	ID=gene-TS60_RS04660;Name=TS60_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04660;old_locus_tag=TS60_0983
NZ_LAEX01000007.1	Protein Homology	CDS	390244	391917	.	-	0	ID=cds-WP_011166781.1;Parent=gene-TS60_RS04660;Dbxref=GenBank:WP_011166781.1;Name=WP_011166781.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04660;product=IS1634-like element IS1634 family transposase;protein_id=WP_011166781.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	392038	392913	.	+	.	ID=gene-TS60_RS04665;Name=TS60_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04665;old_locus_tag=TS60_0984
NZ_LAEX01000007.1	Protein Homology	CDS	392038	392913	.	+	0	ID=cds-WP_227716929.1;Parent=gene-TS60_RS04665;Dbxref=GenBank:WP_227716929.1;Name=WP_227716929.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012692.6;locus_tag=TS60_RS04665;product=ROK family protein;protein_id=WP_227716929.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	392981	393913	.	-	.	ID=gene-TS60_RS04670;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=TS60_RS04670;old_locus_tag=TS60_0985
NZ_LAEX01000007.1	Protein Homology	CDS	392981	393913	.	-	0	ID=cds-WP_011167019.1;Parent=gene-TS60_RS04670;Dbxref=GenBank:WP_011167019.1;Name=WP_011167019.1;Ontology_term=GO:0016310,GO:0019546,GO:0005524,GO:0008804;gbkey=CDS;gene=arcC;go_function=ATP binding|0005524||IEA,carbamate kinase activity|0008804||IEA;go_process=phosphorylation|0016310||IEA,L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862889.1;locus_tag=TS60_RS04670;product=carbamate kinase;protein_id=WP_011167019.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	393926	394456	.	-	.	ID=gene-TS60_RS07730;Name=TS60_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07730;old_locus_tag=TS60_0986
NZ_LAEX01000007.1	Protein Homology	CDS	393926	394456	.	-	0	ID=cds-WP_015545478.1;Parent=gene-TS60_RS07730;Dbxref=GenBank:WP_015545478.1;Name=WP_015545478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.6;locus_tag=TS60_RS07730;product=hypothetical protein;protein_id=WP_015545478.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	394545	395012	.	-	.	ID=gene-TS60_RS07735;Name=TS60_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07735
NZ_LAEX01000007.1	Protein Homology	CDS	394545	395012	.	-	0	ID=cds-WP_211202783.1-2;Parent=gene-TS60_RS07735;Dbxref=GenBank:WP_211202783.1;Name=WP_211202783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.6;locus_tag=TS60_RS07735;product=hypothetical protein;protein_id=WP_211202783.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	395315	398142	.	-	.	ID=gene-TS60_RS04685;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=pseudogene;locus_tag=TS60_RS04685;old_locus_tag=TS60_0988;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	395315	398142	.	-	0	ID=cds-TS60_RS04685;Parent=gene-TS60_RS04685;Note=frameshifted;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269119.1;locus_tag=TS60_RS04685;product=magnesium-translocating P-type ATPase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	398464	399624	.	+	.	ID=gene-TS60_RS04690;Name=TS60_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04690;old_locus_tag=TS60_0989
NZ_LAEX01000007.1	Protein Homology	CDS	398464	399624	.	+	0	ID=cds-WP_015545271.1;Parent=gene-TS60_RS04690;Dbxref=GenBank:WP_015545271.1;Name=WP_015545271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545271.1;locus_tag=TS60_RS04690;product=MSC_0882 family membrane protein;protein_id=WP_015545271.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	399665	401340	.	-	.	ID=gene-TS60_RS06140;Name=TS60_RS06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06140;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	399665	401340	.	-	0	ID=cds-TS60_RS06140;Parent=gene-TS60_RS06140;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS06140;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	401561	401860	.	-	.	ID=gene-TS60_RS04705;Name=TS60_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04705;old_locus_tag=TS60_0992
NZ_LAEX01000007.1	Protein Homology	CDS	401561	401860	.	-	0	ID=cds-WP_011167037.1;Parent=gene-TS60_RS04705;Dbxref=GenBank:WP_011167037.1;Name=WP_011167037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167037.1;locus_tag=TS60_RS04705;product=hypothetical protein;protein_id=WP_011167037.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	401860	403287	.	-	.	ID=gene-TS60_RS04710;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=TS60_RS04710;old_locus_tag=TS60_0993
NZ_LAEX01000007.1	Protein Homology	CDS	401860	403287	.	-	0	ID=cds-WP_015545389.1;Parent=gene-TS60_RS04710;Dbxref=GenBank:WP_015545389.1;Name=WP_015545389.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167038.1;locus_tag=TS60_RS04710;product=F0F1 ATP synthase subunit beta;protein_id=WP_015545389.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	403296	404138	.	-	.	ID=gene-TS60_RS04715;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=TS60_RS04715;old_locus_tag=TS60_0994
NZ_LAEX01000007.1	Protein Homology	CDS	403296	404138	.	-	0	ID=cds-WP_015545588.1;Parent=gene-TS60_RS04715;Dbxref=GenBank:WP_015545588.1;Name=WP_015545588.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698248.1;locus_tag=TS60_RS04715;product=ATP synthase F1 subunit gamma;protein_id=WP_015545588.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	404140	405717	.	-	.	ID=gene-TS60_RS04720;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=TS60_RS04720;old_locus_tag=TS60_0995
NZ_LAEX01000007.1	Protein Homology	CDS	404140	405717	.	-	0	ID=cds-WP_015545272.1;Parent=gene-TS60_RS04720;Dbxref=GenBank:WP_015545272.1;Name=WP_015545272.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545272.1;locus_tag=TS60_RS04720;product=F0F1 ATP synthase subunit alpha;protein_id=WP_015545272.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	405729	406274	.	-	.	ID=gene-TS60_RS04725;Name=TS60_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04725;old_locus_tag=TS60_0996
NZ_LAEX01000007.1	Protein Homology	CDS	405729	406274	.	-	0	ID=cds-WP_011167041.1;Parent=gene-TS60_RS04725;Dbxref=GenBank:WP_011167041.1;Name=WP_011167041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167041.1;locus_tag=TS60_RS04725;product=F0F1 ATP synthase subunit delta;protein_id=WP_011167041.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	406276	406821	.	-	.	ID=gene-TS60_RS04730;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=TS60_RS04730;old_locus_tag=TS60_0997
NZ_LAEX01000007.1	Protein Homology	CDS	406276	406821	.	-	0	ID=cds-WP_011167042.1;Parent=gene-TS60_RS04730;Dbxref=GenBank:WP_011167042.1;Name=WP_011167042.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167042.1;locus_tag=TS60_RS04730;product=F0F1 ATP synthase subunit B;protein_id=WP_011167042.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	406850	407155	.	-	.	ID=gene-TS60_RS04735;Name=TS60_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04735;old_locus_tag=TS60_0998
NZ_LAEX01000007.1	Protein Homology	CDS	406850	407155	.	-	0	ID=cds-WP_011167043.1;Parent=gene-TS60_RS04735;Dbxref=GenBank:WP_011167043.1;Name=WP_011167043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862992.1;locus_tag=TS60_RS04735;product=ATP synthase subunit C;protein_id=WP_011167043.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	407185	408048	.	-	.	ID=gene-TS60_RS04740;Name=TS60_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04740;old_locus_tag=TS60_0999
NZ_LAEX01000007.1	Protein Homology	CDS	407185	408048	.	-	0	ID=cds-WP_011167044.1;Parent=gene-TS60_RS04740;Dbxref=GenBank:WP_011167044.1;Name=WP_011167044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167044.1;locus_tag=TS60_RS04740;product=F0F1 ATP synthase subunit A;protein_id=WP_011167044.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	408066	408446	.	-	.	ID=gene-TS60_RS04745;Name=TS60_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04745;old_locus_tag=TS60_1000
NZ_LAEX01000007.1	Protein Homology	CDS	408066	408446	.	-	0	ID=cds-WP_011167045.1;Parent=gene-TS60_RS04745;Dbxref=GenBank:WP_011167045.1;Name=WP_011167045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033688.1;locus_tag=TS60_RS04745;product=MG406 family protein;protein_id=WP_011167045.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	408587	409210	.	-	.	ID=gene-TS60_RS04750;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=TS60_RS04750;old_locus_tag=TS60_1001
NZ_LAEX01000007.1	Protein Homology	CDS	408587	409210	.	-	0	ID=cds-WP_015545345.1;Parent=gene-TS60_RS04750;Dbxref=GenBank:WP_015545345.1;Name=WP_015545345.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183004.1;locus_tag=TS60_RS04750;product=uracil phosphoribosyltransferase;protein_id=WP_015545345.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	409310	410551	.	-	.	ID=gene-TS60_RS04755;Name=TS60_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04755;old_locus_tag=TS60_1002
NZ_LAEX01000007.1	Protein Homology	CDS	409310	410551	.	-	0	ID=cds-WP_011167047.1;Parent=gene-TS60_RS04755;Dbxref=GenBank:WP_011167047.1;Name=WP_011167047.1;Ontology_term=GO:0019264,GO:0004372;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447441.1;locus_tag=TS60_RS04755;product=serine hydroxymethyltransferase;protein_id=WP_011167047.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	410535	410978	.	-	.	ID=gene-TS60_RS04760;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=TS60_RS04760;old_locus_tag=TS60_1003
NZ_LAEX01000007.1	Protein Homology	CDS	410535	410978	.	-	0	ID=cds-WP_015545390.1;Parent=gene-TS60_RS04760;Dbxref=GenBank:WP_015545390.1;Name=WP_015545390.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862995.1;locus_tag=TS60_RS04760;product=ribose 5-phosphate isomerase B;protein_id=WP_015545390.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	411057	411353	.	+	.	ID=gene-TS60_RS04765;Name=TS60_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04765;old_locus_tag=TS60_1004
NZ_LAEX01000007.1	Protein Homology	CDS	411057	411353	.	+	0	ID=cds-WP_011167049.1;Parent=gene-TS60_RS04765;Dbxref=GenBank:WP_011167049.1;Name=WP_011167049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729906.1;locus_tag=TS60_RS04765;product=rhodanese-like domain-containing protein;protein_id=WP_011167049.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	411362	413548	.	-	.	ID=gene-TS60_RS04770;Name=TS60_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04770;old_locus_tag=TS60_1005
NZ_LAEX01000007.1	Protein Homology	CDS	411362	413548	.	-	0	ID=cds-WP_011167050.1;Parent=gene-TS60_RS04770;Dbxref=GenBank:WP_011167050.1;Name=WP_011167050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167050.1;locus_tag=TS60_RS04770;product=MAG2960 family serine endopeptidase lipoprotein;protein_id=WP_011167050.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	413669	415080	.	+	.	ID=gene-TS60_RS06765;Name=TS60_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06765
NZ_LAEX01000007.1	Protein Homology	CDS	413669	414161	.	+	0	ID=cds-WP_139552595.1;Parent=gene-TS60_RS06765;Dbxref=GenBank:WP_139552595.1;Name=WP_139552595.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06765;product=IS3-like element IS1296 family transposase;protein_id=WP_139552595.1;transl_table=4
NZ_LAEX01000007.1	Protein Homology	CDS	414161	415080	.	+	2	ID=cds-WP_139552595.1;Parent=gene-TS60_RS06765;Dbxref=GenBank:WP_139552595.1;Name=WP_139552595.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06765;product=IS3-like element IS1296 family transposase;protein_id=WP_139552595.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	415119	416087	.	-	.	ID=gene-TS60_RS04785;Name=TS60_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04785;old_locus_tag=TS60_1008
NZ_LAEX01000007.1	Protein Homology	CDS	415119	416087	.	-	0	ID=cds-WP_011166340.1-2;Parent=gene-TS60_RS04785;Dbxref=GenBank:WP_011166340.1;Name=WP_011166340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166340.1;locus_tag=TS60_RS04785;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166340.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	416102	417064	.	-	.	ID=gene-TS60_RS04790;Name=TS60_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04790;old_locus_tag=TS60_1009
NZ_LAEX01000007.1	Protein Homology	CDS	416102	417064	.	-	0	ID=cds-WP_011167052.1;Parent=gene-TS60_RS04790;Dbxref=GenBank:WP_011167052.1;Name=WP_011167052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167052.1;locus_tag=TS60_RS04790;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011167052.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	417300	417902	.	-	.	ID=gene-TS60_RS04795;Name=TS60_RS04795;end_range=417902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04795;old_locus_tag=TS60_1010;partial=true;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	417300	417902	.	-	0	ID=cds-TS60_RS04795;Parent=gene-TS60_RS04795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=417902,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862522.1;locus_tag=TS60_RS04795;partial=true;product=glutamine amidotransferase-related protein;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	418012	419441	.	+	.	ID=gene-TS60_RS04800;Name=TS60_RS04800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04800;old_locus_tag=TS60_1011;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	418012	419441	.	+	0	ID=cds-TS60_RS04800;Parent=gene-TS60_RS04800;Note=frameshifted;Ontology_term=GO:0055085,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863057.1;locus_tag=TS60_RS04800;product=hexose phosphate transporter;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	419487	420898	.	-	.	ID=gene-TS60_RS06775;Name=TS60_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06775
NZ_LAEX01000007.1	Protein Homology	CDS	420406	420898	.	-	0	ID=cds-WP_139552596.1;Parent=gene-TS60_RS06775;Dbxref=GenBank:WP_139552596.1;Name=WP_139552596.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06775;product=IS3-like element IS1296 family transposase;protein_id=WP_139552596.1;transl_table=4
NZ_LAEX01000007.1	Protein Homology	CDS	419487	420406	.	-	2	ID=cds-WP_139552596.1;Parent=gene-TS60_RS06775;Dbxref=GenBank:WP_139552596.1;Name=WP_139552596.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06775;product=IS3-like element IS1296 family transposase;protein_id=WP_139552596.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	421245	422252	.	+	.	ID=gene-TS60_RS08005;Name=TS60_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS08005;old_locus_tag=TS60_1014
NZ_LAEX01000007.1	Protein Homology	CDS	421245	422252	.	+	0	ID=cds-WP_434349380.1;Parent=gene-TS60_RS08005;Dbxref=GenBank:WP_434349380.1;Name=WP_434349380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545482.1;locus_tag=TS60_RS08005;product=DNA-binding protein;protein_id=WP_434349380.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	422245	424902	.	+	.	ID=gene-TS60_RS04820;Name=TS60_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04820;old_locus_tag=TS60_1015
NZ_LAEX01000007.1	Protein Homology	CDS	422245	424902	.	+	0	ID=cds-WP_015545297.1;Parent=gene-TS60_RS04820;Dbxref=GenBank:WP_015545297.1;Name=WP_015545297.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729978.1;locus_tag=TS60_RS04820;product=HAD-IC family P-type ATPase;protein_id=WP_015545297.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	424961	426499	.	+	.	ID=gene-TS60_RS04825;Name=TS60_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04825;old_locus_tag=TS60_1016
NZ_LAEX01000007.1	Protein Homology	CDS	424961	426499	.	+	0	ID=cds-WP_011167059.1;Parent=gene-TS60_RS04825;Dbxref=GenBank:WP_011167059.1;Name=WP_011167059.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863055.1;locus_tag=TS60_RS04825;product=APC family permease;protein_id=WP_011167059.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	426471	427151	.	+	.	ID=gene-TS60_RS04830;Name=TS60_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04830;old_locus_tag=TS60_1017
NZ_LAEX01000007.1	Protein Homology	CDS	426471	427151	.	+	0	ID=cds-WP_045596667.1;Parent=gene-TS60_RS04830;Dbxref=GenBank:WP_045596667.1;Name=WP_045596667.1;Ontology_term=GO:0034220,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167060.1;locus_tag=TS60_RS04830;product=ECF transporter S component;protein_id=WP_045596667.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	427296	428876	.	+	.	ID=gene-TS60_RS04835;Name=TS60_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04835;old_locus_tag=TS60_1018
NZ_LAEX01000007.1	Protein Homology	CDS	427296	428876	.	+	0	ID=cds-WP_015545437.1;Parent=gene-TS60_RS04835;Dbxref=GenBank:WP_015545437.1;Name=WP_015545437.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545437.1;locus_tag=TS60_RS04835;product=APC family permease;protein_id=WP_015545437.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	428980	429576	.	+	.	ID=gene-TS60_RS04840;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=TS60_RS04840;old_locus_tag=TS60_1019
NZ_LAEX01000007.1	Protein Homology	CDS	428980	429576	.	+	0	ID=cds-WP_015545630.1;Parent=gene-TS60_RS04840;Dbxref=GenBank:WP_015545630.1;Name=WP_015545630.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698116.1;locus_tag=TS60_RS04840;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_015545630.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	429576	429989	.	+	.	ID=gene-TS60_RS07740;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=TS60_RS07740;old_locus_tag=TS60_1020
NZ_LAEX01000007.1	Protein Homology	CDS	429576	429989	.	+	0	ID=cds-WP_011167063.1;Parent=gene-TS60_RS07740;Dbxref=GenBank:WP_011167063.1;Name=WP_011167063.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167063.1;locus_tag=TS60_RS07740;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_011167063.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	430037	430270	.	+	.	ID=gene-TS60_RS07745;Name=TS60_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07745;old_locus_tag=TS60_1021
NZ_LAEX01000007.1	Protein Homology	CDS	430037	430270	.	+	0	ID=cds-WP_250635716.1;Parent=gene-TS60_RS07745;Dbxref=GenBank:WP_250635716.1;Name=WP_250635716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014575.6;locus_tag=TS60_RS07745;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_250635716.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	430272	430472	.	+	.	ID=gene-TS60_RS04850;Name=TS60_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04850;old_locus_tag=TS60_1022
NZ_LAEX01000007.1	Protein Homology	CDS	430272	430472	.	+	0	ID=cds-WP_011167064.1;Parent=gene-TS60_RS04850;Dbxref=GenBank:WP_011167064.1;Name=WP_011167064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863051.1;locus_tag=TS60_RS04850;product=DUF951 domain-containing protein;protein_id=WP_011167064.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	430508	431602	.	+	.	ID=gene-TS60_RS04855;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=TS60_RS04855;old_locus_tag=TS60_1023
NZ_LAEX01000007.1	Protein Homology	CDS	430508	431602	.	+	0	ID=cds-WP_011167065.1;Parent=gene-TS60_RS04855;Dbxref=GenBank:WP_011167065.1;Name=WP_011167065.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698114.1;locus_tag=TS60_RS04855;product=redox-regulated ATPase YchF;protein_id=WP_011167065.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	431574	432281	.	+	.	ID=gene-TS60_RS04860;Name=TS60_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04860;old_locus_tag=TS60_1024
NZ_LAEX01000007.1	Protein Homology	CDS	431574	432281	.	+	0	ID=cds-WP_039275787.1;Parent=gene-TS60_RS04860;Dbxref=GenBank:WP_039275787.1;Name=WP_039275787.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863050.1;locus_tag=TS60_RS04860;product=YgjP family zinc-dependent metalloprotease;protein_id=WP_039275787.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	432350	434116	.	+	.	ID=gene-TS60_RS04865;Name=TS60_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04865;old_locus_tag=TS60_1025
NZ_LAEX01000007.1	Protein Homology	CDS	432350	434116	.	+	0	ID=cds-WP_015545529.1;Parent=gene-TS60_RS04865;Dbxref=GenBank:WP_015545529.1;Name=WP_015545529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167067.1;locus_tag=TS60_RS04865;product=YfcC family protein;protein_id=WP_015545529.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	434226	436085	.	+	.	ID=gene-TS60_RS04870;Name=TS60_RS04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS04870;old_locus_tag=TS60_1026;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	434226	436085	.	+	0	ID=cds-TS60_RS04870;Parent=gene-TS60_RS04870;Note=frameshifted;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387634.1;locus_tag=TS60_RS04870;product=ABC transporter permease;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	436094	437767	.	-	.	ID=gene-TS60_RS04880;Name=TS60_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04880;old_locus_tag=TS60_1028
NZ_LAEX01000007.1	Protein Homology	CDS	436094	437767	.	-	0	ID=cds-WP_045596670.1;Parent=gene-TS60_RS04880;Dbxref=GenBank:WP_045596670.1;Name=WP_045596670.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04880;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596670.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	438060	439262	.	+	.	ID=gene-TS60_RS04885;Name=TS60_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04885;old_locus_tag=TS60_1029
NZ_LAEX01000007.1	Protein Homology	CDS	438060	439262	.	+	0	ID=cds-WP_011167072.1;Parent=gene-TS60_RS04885;Dbxref=GenBank:WP_011167072.1;Name=WP_011167072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729968.1;locus_tag=TS60_RS04885;product=aromatic motif membrane protein;protein_id=WP_011167072.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	439249	440079	.	+	.	ID=gene-TS60_RS04890;Name=TS60_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04890;old_locus_tag=TS60_1030
NZ_LAEX01000007.1	Protein Homology	CDS	439249	440079	.	+	0	ID=cds-WP_011167073.1;Parent=gene-TS60_RS04890;Dbxref=GenBank:WP_011167073.1;Name=WP_011167073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863046.1;locus_tag=TS60_RS04890;product=aromatic motif membrane protein;protein_id=WP_011167073.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	440081	440968	.	+	.	ID=gene-TS60_RS04895;Name=TS60_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04895;old_locus_tag=TS60_1031
NZ_LAEX01000007.1	Protein Homology	CDS	440081	440968	.	+	0	ID=cds-WP_015545581.1;Parent=gene-TS60_RS04895;Dbxref=GenBank:WP_015545581.1;Name=WP_015545581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863045.1;locus_tag=TS60_RS04895;product=aromatic motif membrane protein;protein_id=WP_015545581.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	441062	441547	.	+	.	ID=gene-TS60_RS04900;Name=TS60_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04900;old_locus_tag=TS60_1032
NZ_LAEX01000007.1	Protein Homology	CDS	441062	441547	.	+	0	ID=cds-WP_015545256.1;Parent=gene-TS60_RS04900;Dbxref=GenBank:WP_015545256.1;Name=WP_015545256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545256.1;locus_tag=TS60_RS04900;product=hypothetical protein;protein_id=WP_015545256.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	441549	442253	.	+	.	ID=gene-TS60_RS04905;Name=TS60_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04905;old_locus_tag=TS60_1033
NZ_LAEX01000007.1	Protein Homology	CDS	441549	442253	.	+	0	ID=cds-WP_015545600.1;Parent=gene-TS60_RS04905;Dbxref=GenBank:WP_015545600.1;Name=WP_015545600.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448073.1;locus_tag=TS60_RS04905;product=ABC transporter ATP-binding protein;protein_id=WP_015545600.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	442231	442605	.	+	.	ID=gene-TS60_RS07610;Name=TS60_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07610;old_locus_tag=TS60_1034
NZ_LAEX01000007.1	Protein Homology	CDS	442231	442605	.	+	0	ID=cds-WP_011167077.1;Parent=gene-TS60_RS07610;Dbxref=GenBank:WP_011167077.1;Name=WP_011167077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167077.1;locus_tag=TS60_RS07610;product=hypothetical protein;protein_id=WP_011167077.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	443122	443256	.	+	.	ID=gene-TS60_RS07750;Name=TS60_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07750
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	443122	443256	.	+	0	ID=cds-WP_011167078.1;Parent=gene-TS60_RS07750;Dbxref=GenBank:WP_011167078.1;Name=WP_011167078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07750;product=hypothetical protein;protein_id=WP_011167078.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	443365	443586	.	+	.	ID=gene-TS60_RS07615;Name=TS60_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07615;old_locus_tag=TS60_1035
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	443365	443586	.	+	0	ID=cds-WP_015545264.1;Parent=gene-TS60_RS07615;Dbxref=GenBank:WP_015545264.1;Name=WP_015545264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07615;product=hypothetical protein;protein_id=WP_015545264.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	443769	445441	.	+	.	ID=gene-TS60_RS06160;Name=TS60_RS06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06160;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	443769	445441	.	+	0	ID=cds-TS60_RS06160;Parent=gene-TS60_RS06160;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS06160;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	446211	448142	.	-	.	ID=gene-TS60_RS04935;Name=TS60_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04935;old_locus_tag=TS60_1040
NZ_LAEX01000007.1	Protein Homology	CDS	446211	448142	.	-	0	ID=cds-WP_011167080.1;Parent=gene-TS60_RS04935;Dbxref=GenBank:WP_011167080.1;Name=WP_011167080.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584532.1;locus_tag=TS60_RS04935;product=type IA DNA topoisomerase;protein_id=WP_011167080.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	448329	449144	.	+	.	ID=gene-TS60_RS04940;Name=TS60_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04940;old_locus_tag=TS60_1041
NZ_LAEX01000007.1	Protein Homology	CDS	448329	449144	.	+	0	ID=cds-WP_045596676.1;Parent=gene-TS60_RS04940;Dbxref=GenBank:WP_045596676.1;Name=WP_045596676.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863037.1;locus_tag=TS60_RS04940;product=MurR/RpiR family transcriptional regulator;protein_id=WP_045596676.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	449184	449540	.	-	.	ID=gene-TS60_RS04945;Name=TS60_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04945;old_locus_tag=TS60_1042
NZ_LAEX01000007.1	Protein Homology	CDS	449184	449540	.	-	0	ID=cds-WP_080512665.1;Parent=gene-TS60_RS04945;Dbxref=GenBank:WP_080512665.1;Name=WP_080512665.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.6;locus_tag=TS60_RS04945;product=DUF2326 domain-containing protein;protein_id=WP_080512665.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	449537	449749	.	-	.	ID=gene-TS60_RS07075;Name=TS60_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07075;old_locus_tag=TS60_1043
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	449537	449749	.	-	0	ID=cds-WP_045610429.1;Parent=gene-TS60_RS07075;Dbxref=GenBank:WP_045610429.1;Name=WP_045610429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07075;product=hypothetical protein;protein_id=WP_045610429.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	449815	451488	.	-	.	ID=gene-TS60_RS04955;Name=TS60_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04955;old_locus_tag=TS60_1044
NZ_LAEX01000007.1	Protein Homology	CDS	449815	451488	.	-	0	ID=cds-WP_011167083.1;Parent=gene-TS60_RS04955;Dbxref=GenBank:WP_011167083.1;Name=WP_011167083.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS04955;product=IS1634-like element IS1634 family transposase;protein_id=WP_011167083.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	452001	452930	.	-	.	ID=gene-TS60_RS04960;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=TS60_RS04960;old_locus_tag=TS60_1045
NZ_LAEX01000007.1	Protein Homology	CDS	452001	452930	.	-	0	ID=cds-WP_011167084.1;Parent=gene-TS60_RS04960;Dbxref=GenBank:WP_011167084.1;Name=WP_011167084.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269687.1;locus_tag=TS60_RS04960;product=DNA-binding protein WhiA;protein_id=WP_011167084.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	452942	454373	.	-	.	ID=gene-TS60_RS07865;Name=TS60_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07865;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	452942	454373	.	-	0	ID=cds-TS60_RS07865;Parent=gene-TS60_RS07865;Note=frameshifted;Ontology_term=GO:0009249,GO:0042158,GO:0008961,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387613.1;locus_tag=TS60_RS07865;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	454382	455314	.	-	.	ID=gene-TS60_RS04970;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=TS60_RS04970;old_locus_tag=TS60_1048
NZ_LAEX01000007.1	Protein Homology	CDS	454382	455314	.	-	0	ID=cds-WP_011167087.1;Parent=gene-TS60_RS04970;Dbxref=GenBank:WP_011167087.1;Name=WP_011167087.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863007.1;locus_tag=TS60_RS04970;product=thioredoxin-disulfide reductase;protein_id=WP_011167087.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	455298	456878	.	-	.	ID=gene-TS60_RS04975;Name=TS60_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04975;old_locus_tag=TS60_1049
NZ_LAEX01000007.1	Protein Homology	CDS	455298	456878	.	-	0	ID=cds-WP_011167088.1;Parent=gene-TS60_RS04975;Dbxref=GenBank:WP_011167088.1;Name=WP_011167088.1;Ontology_term=GO:0042158,GO:0008961,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698094.1;locus_tag=TS60_RS04975;product=prolipoprotein diacylglyceryl transferase family protein;protein_id=WP_011167088.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	456889	457830	.	-	.	ID=gene-TS60_RS04980;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=TS60_RS04980;old_locus_tag=TS60_1050
NZ_LAEX01000007.1	Protein Homology	CDS	456889	457830	.	-	0	ID=cds-WP_011167089.1;Parent=gene-TS60_RS04980;Dbxref=GenBank:WP_011167089.1;Name=WP_011167089.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698093.1;locus_tag=TS60_RS04980;product=HPr(Ser) kinase/phosphatase;protein_id=WP_011167089.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	457909	458583	.	-	.	ID=gene-TS60_RS04985;Name=TS60_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04985;old_locus_tag=TS60_1051
NZ_LAEX01000007.1	Protein Homology	CDS	457909	458583	.	-	0	ID=cds-WP_015545603.1;Parent=gene-TS60_RS04985;Dbxref=GenBank:WP_015545603.1;Name=WP_015545603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448048.1;locus_tag=TS60_RS04985;product=folate family ECF transporter S component;protein_id=WP_015545603.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	458611	459720	.	-	.	ID=gene-TS60_RS04990;Name=TS60_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS04990;old_locus_tag=TS60_1052
NZ_LAEX01000007.1	Protein Homology	CDS	458611	459720	.	-	0	ID=cds-WP_011167091.1;Parent=gene-TS60_RS04990;Dbxref=GenBank:WP_011167091.1;Name=WP_011167091.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167091.1;locus_tag=TS60_RS04990;product=Mur ligase family protein;protein_id=WP_011167091.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	459713	462553	.	-	.	ID=gene-TS60_RS04995;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=TS60_RS04995;old_locus_tag=TS60_1053
NZ_LAEX01000007.1	Protein Homology	CDS	459713	462553	.	-	0	ID=cds-WP_015545467.1;Parent=gene-TS60_RS04995;Dbxref=GenBank:WP_015545467.1;Name=WP_015545467.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863011.1;locus_tag=TS60_RS04995;product=excinuclease ABC subunit UvrA;protein_id=WP_015545467.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	462562	464559	.	-	.	ID=gene-TS60_RS05000;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=TS60_RS05000;old_locus_tag=TS60_1054
NZ_LAEX01000007.1	Protein Homology	CDS	462562	464559	.	-	0	ID=cds-WP_015545642.1;Parent=gene-TS60_RS05000;Dbxref=GenBank:WP_015545642.1;Name=WP_015545642.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863012.1;locus_tag=TS60_RS05000;product=excinuclease ABC subunit UvrB;protein_id=WP_015545642.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	464846	465796	.	+	.	ID=gene-TS60_RS05005;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=TS60_RS05005;old_locus_tag=TS60_1055
NZ_LAEX01000007.1	Protein Homology	CDS	464846	465796	.	+	0	ID=cds-WP_015545650.1;Parent=gene-TS60_RS05005;Dbxref=GenBank:WP_015545650.1;Name=WP_015545650.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863013.1;locus_tag=TS60_RS05005;product=DNA polymerase III subunit delta;protein_id=WP_015545650.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	465799	467268	.	+	.	ID=gene-TS60_RS05010;Name=TS60_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05010;old_locus_tag=TS60_1056
NZ_LAEX01000007.1	Protein Homology	CDS	465799	467268	.	+	0	ID=cds-WP_015545509.1;Parent=gene-TS60_RS05010;Dbxref=GenBank:WP_015545509.1;Name=WP_015545509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167095.1;locus_tag=TS60_RS05010;product=hypothetical protein;protein_id=WP_015545509.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	467434	467508	.	+	.	ID=gene-TS60_RS05015;Name=TS60_RS05015;gbkey=Gene;gene_biotype=tRNA;locus_tag=TS60_RS05015;old_locus_tag=TS60_1057
NZ_LAEX01000007.1	tRNAscan-SE	tRNA	467434	467508	.	+	.	ID=rna-TS60_RS05015;Parent=gene-TS60_RS05015;anticodon=(pos:467467..467469);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS05015;product=tRNA-Cys
NZ_LAEX01000007.1	tRNAscan-SE	exon	467434	467508	.	+	.	ID=exon-TS60_RS05015-1;Parent=rna-TS60_RS05015;anticodon=(pos:467467..467469);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=TS60_RS05015;product=tRNA-Cys
NZ_LAEX01000007.1	RefSeq	gene	467644	468441	.	+	.	ID=gene-TS60_RS05020;Name=TS60_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05020;old_locus_tag=TS60_1058
NZ_LAEX01000007.1	Protein Homology	CDS	467644	468441	.	+	0	ID=cds-WP_015545398.1;Parent=gene-TS60_RS05020;Dbxref=GenBank:WP_015545398.1;Name=WP_015545398.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863015.1;locus_tag=TS60_RS05020;product=TatD family hydrolase;protein_id=WP_015545398.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	468495	468698	.	+	.	ID=gene-TS60_RS05025;Name=TS60_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05025
NZ_LAEX01000007.1	Protein Homology	CDS	468495	468698	.	+	0	ID=cds-WP_011167097.1;Parent=gene-TS60_RS05025;Dbxref=GenBank:WP_011167097.1;Name=WP_011167097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167097.1;locus_tag=TS60_RS05025;product=hypothetical protein;protein_id=WP_011167097.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	468712	468951	.	-	.	ID=gene-TS60_RS07985;Name=TS60_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07985
NZ_LAEX01000007.1	Protein Homology	CDS	468712	468951	.	-	0	ID=cds-WP_080512672.1;Parent=gene-TS60_RS07985;Dbxref=GenBank:WP_080512672.1;Name=WP_080512672.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013964.6;locus_tag=TS60_RS07985;product=HNH endonuclease;protein_id=WP_080512672.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	468948	469886	.	-	.	ID=gene-TS60_RS05030;Name=TS60_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05030;old_locus_tag=TS60_1059
NZ_LAEX01000007.1	Protein Homology	CDS	468948	469886	.	-	0	ID=cds-WP_011167098.1;Parent=gene-TS60_RS05030;Dbxref=GenBank:WP_011167098.1;Name=WP_011167098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167098.1;locus_tag=TS60_RS05030;product=hypothetical protein;protein_id=WP_011167098.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	469980	471521	.	+	.	ID=gene-TS60_RS05035;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=TS60_RS05035;old_locus_tag=TS60_1060
NZ_LAEX01000007.1	Protein Homology	CDS	469980	471521	.	+	0	ID=cds-WP_329955258.1;Parent=gene-TS60_RS05035;Dbxref=GenBank:WP_329955258.1;Name=WP_329955258.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF012372.6;locus_tag=TS60_RS05035;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_329955258.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	471461	471760	.	+	.	ID=gene-TS60_RS07635;Name=TS60_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07635;old_locus_tag=TS60_1061
NZ_LAEX01000007.1	Protein Homology	CDS	471461	471760	.	+	0	ID=cds-WP_049764043.1;Parent=gene-TS60_RS07635;Dbxref=GenBank:WP_049764043.1;Name=WP_049764043.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=TS60_RS07635;product=site-specific DNA-methyltransferase;protein_id=WP_049764043.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	471885	472919	.	+	.	ID=gene-TS60_RS05045;Name=TS60_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05045;old_locus_tag=TS60_1062
NZ_LAEX01000007.1	Protein Homology	CDS	471885	472919	.	+	0	ID=cds-WP_015545575.1;Parent=gene-TS60_RS05045;Dbxref=GenBank:WP_015545575.1;Name=WP_015545575.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0002189;gbkey=CDS;go_component=ribose phosphate diphosphokinase complex|0002189||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698084.1;locus_tag=TS60_RS05045;product=ribose-phosphate diphosphokinase;protein_id=WP_015545575.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	473009	473158	.	+	.	ID=gene-TS60_RS05050;Name=TS60_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05050;old_locus_tag=TS60_1063
NZ_LAEX01000007.1	Protein Homology	CDS	473009	473158	.	+	0	ID=cds-WP_011167102.1;Parent=gene-TS60_RS05050;Dbxref=GenBank:WP_011167102.1;Name=WP_011167102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167102.1;locus_tag=TS60_RS05050;product=hypothetical protein;protein_id=WP_011167102.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	473340	473900	.	+	.	ID=gene-TS60_RS05055;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=TS60_RS05055;old_locus_tag=TS60_1064
NZ_LAEX01000007.1	Protein Homology	CDS	473340	473900	.	+	0	ID=cds-WP_011167103.1;Parent=gene-TS60_RS05055;Dbxref=GenBank:WP_011167103.1;Name=WP_011167103.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387002.1;locus_tag=TS60_RS05055;product=aminoacyl-tRNA hydrolase;protein_id=WP_011167103.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	474021	474482	.	+	.	ID=gene-TS60_RS05060;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=TS60_RS05060;old_locus_tag=TS60_1065
NZ_LAEX01000007.1	Protein Homology	CDS	474021	474482	.	+	0	ID=cds-WP_045596679.1;Parent=gene-TS60_RS05060;Dbxref=GenBank:WP_045596679.1;Name=WP_045596679.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545494.1;locus_tag=TS60_RS05060;product=50S ribosomal protein L9;protein_id=WP_045596679.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	474467	475783	.	+	.	ID=gene-TS60_RS05065;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=TS60_RS05065;old_locus_tag=TS60_1066
NZ_LAEX01000007.1	Protein Homology	CDS	474467	475783	.	+	0	ID=cds-WP_015545685.1;Parent=gene-TS60_RS05065;Dbxref=GenBank:WP_015545685.1;Name=WP_015545685.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729931.1;locus_tag=TS60_RS05065;product=replicative DNA helicase;protein_id=WP_015545685.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	475850	477151	.	+	.	ID=gene-TS60_RS05070;Name=TS60_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05070;old_locus_tag=TS60_1067
NZ_LAEX01000007.1	Protein Homology	CDS	475850	477151	.	+	0	ID=cds-WP_011167106.1;Parent=gene-TS60_RS05070;Dbxref=GenBank:WP_011167106.1;Name=WP_011167106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167106.1;locus_tag=TS60_RS05070;product=hypothetical protein;protein_id=WP_011167106.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	477294	478220	.	+	.	ID=gene-TS60_RS05075;Name=TS60_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05075;old_locus_tag=TS60_1068
NZ_LAEX01000007.1	Protein Homology	CDS	477294	478220	.	+	0	ID=cds-WP_045596681.1;Parent=gene-TS60_RS05075;Dbxref=GenBank:WP_045596681.1;Name=WP_045596681.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863019.1;locus_tag=TS60_RS05075;product=ECF transporter S component;protein_id=WP_045596681.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	478229	479554	.	+	.	ID=gene-TS60_RS05080;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=TS60_RS05080;old_locus_tag=TS60_1069
NZ_LAEX01000007.1	Protein Homology	CDS	478229	479554	.	+	0	ID=cds-WP_011167108.1;Parent=gene-TS60_RS05080;Dbxref=GenBank:WP_011167108.1;Name=WP_011167108.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863020.1;locus_tag=TS60_RS05080;product=cysteine--tRNA ligase;protein_id=WP_011167108.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	479556	480290	.	+	.	ID=gene-TS60_RS05085;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=TS60_RS05085;old_locus_tag=TS60_1070
NZ_LAEX01000007.1	Protein Homology	CDS	479556	480290	.	+	0	ID=cds-WP_011167109.1;Parent=gene-TS60_RS05085;Dbxref=GenBank:WP_011167109.1;Name=WP_011167109.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698078.1;locus_tag=TS60_RS05085;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_011167109.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	480351	480512	.	+	.	ID=gene-TS60_RS05090;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=TS60_RS05090;old_locus_tag=TS60_1071
NZ_LAEX01000007.1	Protein Homology	CDS	480351	480512	.	+	0	ID=cds-WP_013729926.1;Parent=gene-TS60_RS05090;Dbxref=GenBank:WP_013729926.1;Name=WP_013729926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387009.1;locus_tag=TS60_RS05090;product=50S ribosomal protein L33;protein_id=WP_013729926.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	480512	480826	.	+	.	ID=gene-TS60_RS05095;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=TS60_RS05095;old_locus_tag=TS60_1072
NZ_LAEX01000007.1	Protein Homology	CDS	480512	480826	.	+	0	ID=cds-WP_011167110.1;Parent=gene-TS60_RS05095;Dbxref=GenBank:WP_011167110.1;Name=WP_011167110.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698077.1;locus_tag=TS60_RS05095;product=preprotein translocase subunit SecE;protein_id=WP_011167110.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	480843	481484	.	+	.	ID=gene-TS60_RS05100;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=TS60_RS05100;old_locus_tag=TS60_1073
NZ_LAEX01000007.1	Protein Homology	CDS	480843	481484	.	+	0	ID=cds-WP_015545656.1;Parent=gene-TS60_RS05100;Dbxref=GenBank:WP_015545656.1;Name=WP_015545656.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729924.1;locus_tag=TS60_RS05100;product=transcription termination/antitermination protein NusG;protein_id=WP_015545656.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	481924	487842	.	+	.	ID=gene-TS60_RS05105;Name=TS60_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05105;old_locus_tag=TS60_1074
NZ_LAEX01000007.1	Protein Homology	CDS	481924	487842	.	+	0	ID=cds-WP_045596683.1;Parent=gene-TS60_RS05105;Dbxref=GenBank:WP_045596683.1;Name=WP_045596683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167112.1;locus_tag=TS60_RS05105;product=PDxFFG protein;protein_id=WP_045596683.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	487852	490809	.	+	.	ID=gene-TS60_RS05110;Name=TS60_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05110;old_locus_tag=TS60_1075
NZ_LAEX01000007.1	Protein Homology	CDS	487852	490809	.	+	0	ID=cds-WP_045596686.1;Parent=gene-TS60_RS05110;Dbxref=GenBank:WP_045596686.1;Name=WP_045596686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863024.1;locus_tag=TS60_RS05110;product=periplasmic substrate-binding domain-containing protein;protein_id=WP_045596686.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	490809	491882	.	+	.	ID=gene-TS60_RS05115;Name=TS60_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05115;old_locus_tag=TS60_1076
NZ_LAEX01000007.1	Protein Homology	CDS	490809	491882	.	+	0	ID=cds-WP_011167114.1;Parent=gene-TS60_RS05115;Dbxref=GenBank:WP_011167114.1;Name=WP_011167114.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698074.1;locus_tag=TS60_RS05115;product=ABC transporter permease;protein_id=WP_011167114.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	491884	492894	.	+	.	ID=gene-TS60_RS05120;Name=TS60_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05120;old_locus_tag=TS60_1077
NZ_LAEX01000007.1	Protein Homology	CDS	491884	492894	.	+	0	ID=cds-WP_011167115.1;Parent=gene-TS60_RS05120;Dbxref=GenBank:WP_011167115.1;Name=WP_011167115.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863025.1;locus_tag=TS60_RS05120;product=ABC transporter permease;protein_id=WP_011167115.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	492902	494347	.	+	.	ID=gene-TS60_RS05125;Name=TS60_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05125;old_locus_tag=TS60_1078
NZ_LAEX01000007.1	Protein Homology	CDS	492902	494347	.	+	0	ID=cds-WP_015545361.1;Parent=gene-TS60_RS05125;Dbxref=GenBank:WP_015545361.1;Name=WP_015545361.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447479.1;locus_tag=TS60_RS05125;product=ABC transporter ATP-binding protein;protein_id=WP_015545361.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	494340	495674	.	+	.	ID=gene-TS60_RS05130;Name=TS60_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05130;old_locus_tag=TS60_1079
NZ_LAEX01000007.1	Protein Homology	CDS	494340	495674	.	+	0	ID=cds-WP_011167117.1;Parent=gene-TS60_RS05130;Dbxref=GenBank:WP_011167117.1;Name=WP_011167117.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447480.1;locus_tag=TS60_RS05130;product=ABC transporter ATP-binding protein;protein_id=WP_011167117.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	495804	497477	.	-	.	ID=gene-TS60_RS05135;Name=TS60_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05135;old_locus_tag=TS60_1080
NZ_LAEX01000007.1	Protein Homology	CDS	495804	497477	.	-	0	ID=cds-WP_011167118.1;Parent=gene-TS60_RS05135;Dbxref=GenBank:WP_011167118.1;Name=WP_011167118.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05135;product=IS1634-like element IS1634 family transposase;protein_id=WP_011167118.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	497607	497870	.	-	.	ID=gene-TS60_RS07755;Name=TS60_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07755
NZ_LAEX01000007.1	Protein Homology	CDS	497607	497870	.	-	0	ID=cds-WP_080512674.1;Parent=gene-TS60_RS07755;Dbxref=GenBank:WP_080512674.1;Name=WP_080512674.1;Ontology_term=GO:0008767;gbkey=CDS;go_function=UDP-galactopyranose mutase activity|0008767||IEA;inference=COORDINATES: protein motif:HMM:NF015247.6;locus_tag=TS60_RS07755;product=UDP-galactopyranose mutase;protein_id=WP_080512674.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	497867	498793	.	-	.	ID=gene-TS60_RS05140;Name=TS60_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05140;old_locus_tag=TS60_1081
NZ_LAEX01000007.1	Protein Homology	CDS	497867	498793	.	-	0	ID=cds-WP_011167119.1;Parent=gene-TS60_RS05140;Dbxref=GenBank:WP_011167119.1;Name=WP_011167119.1;Ontology_term=GO:0008767;gbkey=CDS;go_function=UDP-galactopyranose mutase activity|0008767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167126.1;locus_tag=TS60_RS05140;product=UDP-galactopyranose mutase;protein_id=WP_011167119.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	498806	499810	.	-	.	ID=gene-TS60_RS05145;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=TS60_RS05145;old_locus_tag=TS60_1082
NZ_LAEX01000007.1	Protein Homology	CDS	498806	499810	.	-	0	ID=cds-WP_011167120.1;Parent=gene-TS60_RS05145;Dbxref=GenBank:WP_011167120.1;Name=WP_011167120.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167127.1;locus_tag=TS60_RS05145;product=UDP-glucose 4-epimerase GalE;protein_id=WP_011167120.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	500184	500330	.	+	.	ID=gene-TS60_RS07640;Name=TS60_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07640
NZ_LAEX01000007.1	GeneMarkS-2+	CDS	500184	500330	.	+	0	ID=cds-WP_011167121.1;Parent=gene-TS60_RS07640;Dbxref=GenBank:WP_011167121.1;Name=WP_011167121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07640;product=hypothetical protein;protein_id=WP_011167121.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	500312	501460	.	+	.	ID=gene-TS60_RS05150;Name=TS60_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05150;old_locus_tag=TS60_1083
NZ_LAEX01000007.1	Protein Homology	CDS	500312	501460	.	+	0	ID=cds-WP_011167122.1;Parent=gene-TS60_RS05150;Dbxref=GenBank:WP_011167122.1;Name=WP_011167122.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167122.1;locus_tag=TS60_RS05150;product=glycosyltransferase family 2 protein;protein_id=WP_011167122.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	gene	501513	502313	.	-	.	ID=gene-TS60_RS05155;Name=TS60_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05155;old_locus_tag=TS60_1084
NZ_LAEX01000007.1	Protein Homology	CDS	501513	502313	.	-	0	ID=cds-WP_011167123.1;Parent=gene-TS60_RS05155;Dbxref=GenBank:WP_011167123.1;Name=WP_011167123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167123.1;locus_tag=TS60_RS05155;product=glycosyl transferase;protein_id=WP_011167123.1;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	502253	503407	.	+	.	ID=gene-TS60_RS05160;Name=TS60_RS05160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05160;old_locus_tag=TS60_1085;partial=true;pseudo=true;start_range=.,502253
NZ_LAEX01000007.1	Protein Homology	CDS	502253	503407	.	+	0	ID=cds-TS60_RS05160;Parent=gene-TS60_RS05160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447480.1;locus_tag=TS60_RS05160;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,502253;transl_table=4
NZ_LAEX01000007.1	RefSeq	pseudogene	503507	504069	.	-	.	ID=gene-TS60_RS06810;Name=TS60_RS06810;end_range=504069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06810;partial=true;pseudo=true
NZ_LAEX01000007.1	Protein Homology	CDS	503507	504069	.	-	2	ID=cds-TS60_RS06810;Parent=gene-TS60_RS06810;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=504069,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS06810;partial=true;product=IS1634 family transposase;pseudo=true;transl_table=4
##sequence-region NZ_LAEX01000008.1 1 71581
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2103
NZ_LAEX01000008.1	RefSeq	region	1	71581	.	+	.	ID=NZ_LAEX01000008.1:1..71581;Dbxref=taxon:2103;collected-by=Farcha Laboratory Tchad;collection-date=1965;country=Cameroon;gbkey=Src;genome=genomic;isolation-source=lung;mol_type=genomic DNA;nat-host=cattle;strain=Afade;sub-species=mycoides
NZ_LAEX01000008.1	RefSeq	gene	199	378	.	-	.	ID=gene-TS60_RS07870;Name=TS60_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07870;old_locus_tag=TS60_1088
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	199	378	.	-	0	ID=cds-WP_334198832.1;Parent=gene-TS60_RS07870;Dbxref=GenBank:WP_334198832.1;Name=WP_334198832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07870;product=hypothetical protein;protein_id=WP_334198832.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	350	514	.	-	.	ID=gene-TS60_RS07875;Name=TS60_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07875
NZ_LAEX01000008.1	Protein Homology	CDS	350	514	.	-	0	ID=cds-WP_334198833.1;Parent=gene-TS60_RS07875;Dbxref=GenBank:WP_334198833.1;Name=WP_334198833.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.6;locus_tag=TS60_RS07875;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_334198833.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	1070	2418	.	+	.	ID=gene-TS60_RS05175;Name=TS60_RS05175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05175;old_locus_tag=TS60_1090;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	1070	2418	.	+	0	ID=cds-TS60_RS05175;Parent=gene-TS60_RS05175;Note=frameshifted;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863001.1;locus_tag=TS60_RS05175;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	2598	4272	.	+	.	ID=gene-TS60_RS05185;Name=TS60_RS05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05185;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	2598	4272	.	+	0	ID=cds-TS60_RS05185;Parent=gene-TS60_RS05185;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05185;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	4342	5157	.	-	.	ID=gene-TS60_RS05190;Name=TS60_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05190;old_locus_tag=TS60_1092
NZ_LAEX01000008.1	Protein Homology	CDS	4342	5157	.	-	0	ID=cds-WP_011167130.1;Parent=gene-TS60_RS05190;Dbxref=GenBank:WP_011167130.1;Name=WP_011167130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167130.1;locus_tag=TS60_RS05190;product=glycosyl transferase;protein_id=WP_011167130.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	5097	6248	.	+	.	ID=gene-TS60_RS05195;Name=TS60_RS05195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05195;old_locus_tag=TS60_1093;partial=true;pseudo=true;start_range=.,5097
NZ_LAEX01000008.1	Protein Homology	CDS	5097	6248	.	+	0	ID=cds-TS60_RS05195;Parent=gene-TS60_RS05195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447480.1;locus_tag=TS60_RS05195;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,5097;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	6288	7475	.	-	.	ID=gene-TS60_RS05200;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=TS60_RS05200;old_locus_tag=TS60_1094
NZ_LAEX01000008.1	Protein Homology	CDS	6288	7475	.	-	0	ID=cds-WP_045596714.1;Parent=gene-TS60_RS05200;Dbxref=GenBank:WP_045596714.1;Name=WP_045596714.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167132.1;locus_tag=TS60_RS05200;product=UDP-galactopyranose mutase;protein_id=WP_045596714.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	7488	7754	.	-	.	ID=gene-TS60_RS07880;Name=TS60_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07880;old_locus_tag=TS60_1095
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	7488	7754	.	-	0	ID=cds-WP_015545609.1;Parent=gene-TS60_RS07880;Dbxref=GenBank:WP_015545609.1;Name=WP_015545609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07880;product=Rossmann-fold NAD(P)-binding domain-containing protein;protein_id=WP_015545609.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	7860	8492	.	-	.	ID=gene-TS60_RS07885;Name=TS60_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07885;old_locus_tag=TS60_1096
NZ_LAEX01000008.1	Protein Homology	CDS	7860	8492	.	-	0	ID=cds-WP_015545602.1;Parent=gene-TS60_RS07885;Dbxref=GenBank:WP_015545602.1;Name=WP_015545602.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.6;locus_tag=TS60_RS07885;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_015545602.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	8795	10143	.	+	.	ID=gene-TS60_RS05215;Name=TS60_RS05215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05215;old_locus_tag=TS60_1098;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	8795	10143	.	+	0	ID=cds-TS60_RS05215;Parent=gene-TS60_RS05215;Note=frameshifted;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863001.1;locus_tag=TS60_RS05215;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	10196	11111	.	-	.	ID=gene-TS60_RS05220;Name=TS60_RS05220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05220;old_locus_tag=TS60_1099;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	10196	11111	.	-	0	ID=cds-TS60_RS05220;Parent=gene-TS60_RS05220;Note=frameshifted;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167134.1;locus_tag=TS60_RS05220;product=glycosyltransferase family A protein;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	11582	13255	.	-	.	ID=gene-TS60_RS05225;Name=TS60_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05225;old_locus_tag=TS60_1100
NZ_LAEX01000008.1	Protein Homology	CDS	11582	13255	.	-	0	ID=cds-WP_011167135.1;Parent=gene-TS60_RS05225;Dbxref=GenBank:WP_011167135.1;Name=WP_011167135.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05225;product=IS1634-like element IS1634 family transposase;protein_id=WP_011167135.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	13481	14353	.	-	.	ID=gene-TS60_RS05230;Name=TS60_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05230;old_locus_tag=TS60_1101
NZ_LAEX01000008.1	Protein Homology	CDS	13481	14353	.	-	0	ID=cds-WP_015545394.1;Parent=gene-TS60_RS05230;Dbxref=GenBank:WP_015545394.1;Name=WP_015545394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167136.1;locus_tag=TS60_RS05230;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_015545394.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	14563	15101	.	-	.	ID=gene-TS60_RS07890;Name=TS60_RS07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07890;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	14563	15101	.	-	0	ID=cds-TS60_RS07890;Parent=gene-TS60_RS07890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545508.1;locus_tag=TS60_RS07890;product=hypothetical protein;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	15351	16724	.	+	.	ID=gene-TS60_RS05245;Name=TS60_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05245;old_locus_tag=TS60_1104
NZ_LAEX01000008.1	Protein Homology	CDS	15351	16724	.	+	0	ID=cds-WP_011167139.1;Parent=gene-TS60_RS05245;Dbxref=GenBank:WP_011167139.1;Name=WP_011167139.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863001.1;locus_tag=TS60_RS05245;product=glycosyltransferase family 2 protein;protein_id=WP_011167139.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	17082	17510	.	+	.	ID=gene-TS60_RS05250;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=TS60_RS05250;old_locus_tag=TS60_1105
NZ_LAEX01000008.1	Protein Homology	CDS	17082	17510	.	+	0	ID=cds-WP_011167140.1;Parent=gene-TS60_RS05250;Dbxref=GenBank:WP_011167140.1;Name=WP_011167140.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447424.1;locus_tag=TS60_RS05250;product=50S ribosomal protein L11;protein_id=WP_011167140.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	17510	18190	.	+	.	ID=gene-TS60_RS05255;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=TS60_RS05255;old_locus_tag=TS60_1106
NZ_LAEX01000008.1	Protein Homology	CDS	17510	18190	.	+	0	ID=cds-WP_015545311.1;Parent=gene-TS60_RS05255;Dbxref=GenBank:WP_015545311.1;Name=WP_015545311.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386966.1;locus_tag=TS60_RS05255;product=50S ribosomal protein L1;protein_id=WP_015545311.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	18553	18726	.	+	.	ID=gene-TS60_RS05260;Name=TS60_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05260;old_locus_tag=TS60_1107
NZ_LAEX01000008.1	Protein Homology	CDS	18553	18726	.	+	0	ID=cds-WP_011167142.1;Parent=gene-TS60_RS05260;Dbxref=GenBank:WP_011167142.1;Name=WP_011167142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167142.1;locus_tag=TS60_RS05260;product=hypothetical protein;protein_id=WP_011167142.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	18861	19823	.	+	.	ID=gene-TS60_RS05265;Name=TS60_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05265;old_locus_tag=TS60_1108
NZ_LAEX01000008.1	Protein Homology	CDS	18861	19823	.	+	0	ID=cds-WP_230592189.1;Parent=gene-TS60_RS05265;Dbxref=GenBank:WP_230592189.1;Name=WP_230592189.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545452.1;locus_tag=TS60_RS05265;product=transglutaminase domain-containing protein;protein_id=WP_230592189.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	19980	20666	.	+	.	ID=gene-TS60_RS05270;Name=TS60_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05270;old_locus_tag=TS60_1109
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	19980	20666	.	+	0	ID=cds-WP_011167144.1;Parent=gene-TS60_RS05270;Dbxref=GenBank:WP_011167144.1;Name=WP_011167144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS05270;product=hypothetical protein;protein_id=WP_011167144.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	20819	22225	.	+	.	ID=gene-TS60_RS06830;Name=TS60_RS06830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06830;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	20819	22225	.	+	0	ID=cds-TS60_RS06830;Parent=gene-TS60_RS06830;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06830;product=IS3 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	22341	22559	.	+	.	ID=gene-TS60_RS07655;Name=TS60_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07655;old_locus_tag=TS60_1111
NZ_LAEX01000008.1	Protein Homology	CDS	22341	22559	.	+	0	ID=cds-WP_015545570.1;Parent=gene-TS60_RS07655;Dbxref=GenBank:WP_015545570.1;Name=WP_015545570.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545570.1;locus_tag=TS60_RS07655;product=lipoprotein;protein_id=WP_015545570.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	22507	23184	.	+	.	ID=gene-TS60_RS07080;Name=TS60_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07080;old_locus_tag=TS60_1112
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	22507	23184	.	+	0	ID=cds-WP_049764044.1;Parent=gene-TS60_RS07080;Dbxref=GenBank:WP_049764044.1;Name=WP_049764044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07080;product=hypothetical protein;protein_id=WP_049764044.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	23235	24956	.	+	.	ID=gene-TS60_RS05295;Name=TS60_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05295;old_locus_tag=TS60_1113
NZ_LAEX01000008.1	Protein Homology	CDS	23235	24956	.	+	0	ID=cds-WP_045596719.1;Parent=gene-TS60_RS05295;Dbxref=GenBank:WP_045596719.1;Name=WP_045596719.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05295;product=IS1634-like element IS1634 family transposase;protein_id=WP_045596719.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	24974	25456	.	+	.	ID=gene-TS60_RS05300;Name=TS60_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05300;old_locus_tag=TS60_1114
NZ_LAEX01000008.1	Protein Homology	CDS	24974	25456	.	+	0	ID=cds-WP_227716898.1;Parent=gene-TS60_RS05300;Dbxref=GenBank:WP_227716898.1;Name=WP_227716898.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.6;locus_tag=TS60_RS05300;product=BspA family leucine-rich repeat surface protein;protein_id=WP_227716898.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	25494	25895	.	+	.	ID=gene-TS60_RS07660;Name=TS60_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07660;old_locus_tag=TS60_1115
NZ_LAEX01000008.1	Protein Homology	CDS	25494	25895	.	+	0	ID=cds-WP_230592191.1;Parent=gene-TS60_RS07660;Dbxref=GenBank:WP_230592191.1;Name=WP_230592191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=TS60_RS07660;product=variable surface lipoprotein;protein_id=WP_230592191.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	26563	27798	.	+	.	ID=gene-TS60_RS05310;Name=TS60_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05310;old_locus_tag=TS60_1116
NZ_LAEX01000008.1	Protein Homology	CDS	26563	27798	.	+	0	ID=cds-WP_011167149.1;Parent=gene-TS60_RS05310;Dbxref=GenBank:WP_011167149.1;Name=WP_011167149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167149.1;locus_tag=TS60_RS05310;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011167149.1;transl_table=4
NZ_LAEX01000008.1	cmsearch	sequence_feature	27963	28101	.	+	.	ID=id-NZ_LAEX01000008.1:27963..28101;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_LAEX01000008.1	RefSeq	gene	28120	28617	.	+	.	ID=gene-TS60_RS05315;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=TS60_RS05315;old_locus_tag=TS60_1117
NZ_LAEX01000008.1	Protein Homology	CDS	28120	28617	.	+	0	ID=cds-WP_011167150.1;Parent=gene-TS60_RS05315;Dbxref=GenBank:WP_011167150.1;Name=WP_011167150.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729912.1;locus_tag=TS60_RS05315;product=50S ribosomal protein L10;protein_id=WP_011167150.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	28686	29054	.	+	.	ID=gene-TS60_RS05320;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=TS60_RS05320;old_locus_tag=TS60_1118
NZ_LAEX01000008.1	Protein Homology	CDS	28686	29054	.	+	0	ID=cds-WP_011167151.1;Parent=gene-TS60_RS05320;Dbxref=GenBank:WP_011167151.1;Name=WP_011167151.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269103.1;locus_tag=TS60_RS05320;product=50S ribosomal protein L7/L12;protein_id=WP_011167151.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	29225	30034	.	+	.	ID=gene-TS60_RS05325;Name=TS60_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05325;old_locus_tag=TS60_1119
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	29225	30034	.	+	0	ID=cds-WP_236252335.1;Parent=gene-TS60_RS05325;Dbxref=GenBank:WP_236252335.1;Name=WP_236252335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS05325;product=hypothetical protein;protein_id=WP_236252335.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	30009	30389	.	+	.	ID=gene-TS60_RS07665;Name=TS60_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07665;old_locus_tag=TS60_1120
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	30009	30389	.	+	0	ID=cds-WP_236252336.1;Parent=gene-TS60_RS07665;Dbxref=GenBank:WP_236252336.1;Name=WP_236252336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07665;product=hypothetical protein;protein_id=WP_236252336.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	30379	34254	.	+	.	ID=gene-TS60_RS05330;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=TS60_RS05330;old_locus_tag=TS60_1121
NZ_LAEX01000008.1	Protein Homology	CDS	30379	34254	.	+	0	ID=cds-WP_015545524.1;Parent=gene-TS60_RS05330;Dbxref=GenBank:WP_015545524.1;Name=WP_015545524.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862998.1;locus_tag=TS60_RS05330;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_015545524.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	34266	38033	.	+	.	ID=gene-TS60_RS05335;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=TS60_RS05335;old_locus_tag=TS60_1122
NZ_LAEX01000008.1	Protein Homology	CDS	34266	38033	.	+	0	ID=cds-WP_015545338.1;Parent=gene-TS60_RS05335;Dbxref=GenBank:WP_015545338.1;Name=WP_015545338.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386971.1;locus_tag=TS60_RS05335;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_015545338.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	38074	38529	.	-	.	ID=gene-TS60_RS05340;Name=TS60_RS05340;end_range=38529,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05340;old_locus_tag=TS60_1123;partial=true;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	38074	38529	.	-	0	ID=cds-TS60_RS05340;Parent=gene-TS60_RS05340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=38529,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS05340;partial=true;product=IS3 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	38632	40305	.	+	.	ID=gene-TS60_RS05345;Name=TS60_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05345;old_locus_tag=TS60_1124
NZ_LAEX01000008.1	Protein Homology	CDS	38632	40305	.	+	0	ID=cds-WP_011167154.1;Parent=gene-TS60_RS05345;Dbxref=GenBank:WP_011167154.1;Name=WP_011167154.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05345;product=IS1634-like element IS1634 family transposase;protein_id=WP_011167154.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	40687	40857	.	-	.	ID=gene-TS60_RS05350;Name=TS60_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05350
NZ_LAEX01000008.1	Protein Homology	CDS	40687	40857	.	-	0	ID=cds-WP_015545543.1;Parent=gene-TS60_RS05350;Dbxref=GenBank:WP_015545543.1;Name=WP_015545543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545543.1;locus_tag=TS60_RS05350;product=hypothetical protein;protein_id=WP_015545543.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	40889	41146	.	-	.	ID=gene-TS60_RS05355;Name=TS60_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05355;old_locus_tag=TS60_1125
NZ_LAEX01000008.1	Protein Homology	CDS	40889	41146	.	-	0	ID=cds-WP_011167156.1;Parent=gene-TS60_RS05355;Dbxref=GenBank:WP_011167156.1;Name=WP_011167156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167156.1;locus_tag=TS60_RS05355;product=hypothetical protein;protein_id=WP_011167156.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	41146	41295	.	-	.	ID=gene-TS60_RS05360;Name=TS60_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05360;old_locus_tag=TS60_1126
NZ_LAEX01000008.1	Protein Homology	CDS	41146	41295	.	-	0	ID=cds-WP_011167157.1;Parent=gene-TS60_RS05360;Dbxref=GenBank:WP_011167157.1;Name=WP_011167157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167157.1;locus_tag=TS60_RS05360;product=hypothetical protein;protein_id=WP_011167157.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	41352	42332	.	-	.	ID=gene-TS60_RS05365;Name=TS60_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05365;old_locus_tag=TS60_1127
NZ_LAEX01000008.1	Protein Homology	CDS	41352	42332	.	-	0	ID=cds-WP_011167158.1;Parent=gene-TS60_RS05365;Dbxref=GenBank:WP_011167158.1;Name=WP_011167158.1;Ontology_term=GO:0070981,GO:0004071,GO:0005524;gbkey=CDS;go_function=aspartate-ammonia ligase activity|0004071||IEA,ATP binding|0005524||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363077.1;locus_tag=TS60_RS05365;product=aspartate--ammonia ligase;protein_id=WP_011167158.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	42537	43298	.	+	.	ID=gene-TS60_RS05370;Name=TS60_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05370;old_locus_tag=TS60_1128
NZ_LAEX01000008.1	Protein Homology	CDS	42537	43298	.	+	0	ID=cds-WP_011167159.1;Parent=gene-TS60_RS05370;Dbxref=GenBank:WP_011167159.1;Name=WP_011167159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167159.1;locus_tag=TS60_RS05370;product=DUF3800 domain-containing protein;protein_id=WP_011167159.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	43560	45449	.	-	.	ID=gene-TS60_RS05375;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=TS60_RS05375;old_locus_tag=TS60_1129
NZ_LAEX01000008.1	Protein Homology	CDS	43560	45449	.	-	0	ID=cds-WP_015545387.1;Parent=gene-TS60_RS05375;Dbxref=GenBank:WP_015545387.1;Name=WP_015545387.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167160.1;locus_tag=TS60_RS05375;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_015545387.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	45600	47174	.	-	.	ID=gene-TS60_RS05380;Name=TS60_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05380;old_locus_tag=TS60_1130
NZ_LAEX01000008.1	Protein Homology	CDS	45600	47174	.	-	0	ID=cds-WP_011167161.1;Parent=gene-TS60_RS05380;Dbxref=GenBank:WP_011167161.1;Name=WP_011167161.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729985.1;locus_tag=TS60_RS05380;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_011167161.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	47194	48537	.	-	.	ID=gene-TS60_RS05385;Name=TS60_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05385;old_locus_tag=TS60_1131
NZ_LAEX01000008.1	Protein Homology	CDS	47194	48537	.	-	0	ID=cds-WP_015545454.1;Parent=gene-TS60_RS05385;Dbxref=GenBank:WP_015545454.1;Name=WP_015545454.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698128.1;locus_tag=TS60_RS05385;product=CoA-disulfide reductase;protein_id=WP_015545454.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	48756	49256	.	+	.	ID=gene-TS60_RS05390;Name=TS60_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05390;old_locus_tag=TS60_1132
NZ_LAEX01000008.1	Protein Homology	CDS	48756	49256	.	+	0	ID=cds-WP_011167163.1;Parent=gene-TS60_RS05390;Dbxref=GenBank:WP_011167163.1;Name=WP_011167163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698129.1;locus_tag=TS60_RS05390;product=isochorismatase family protein;protein_id=WP_011167163.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	49449	50786	.	+	.	ID=gene-TS60_RS05395;Name=TS60_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05395;old_locus_tag=TS60_1133
NZ_LAEX01000008.1	Protein Homology	CDS	49449	50786	.	+	0	ID=cds-WP_011167164.1;Parent=gene-TS60_RS05395;Dbxref=GenBank:WP_011167164.1;Name=WP_011167164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729989.1;locus_tag=TS60_RS05395;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011167164.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	51935	52153	.	-	.	ID=gene-TS60_RS06845;Name=TS60_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06845;old_locus_tag=TS60_1135
NZ_LAEX01000008.1	Protein Homology	CDS	51935	52153	.	-	0	ID=cds-WP_011167166.1;Parent=gene-TS60_RS06845;Dbxref=GenBank:WP_011167166.1;Name=WP_011167166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167166.1;locus_tag=TS60_RS06845;product=hypothetical protein;protein_id=WP_011167166.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	52384	52677	.	-	.	ID=gene-TS60_RS07670;Name=TS60_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07670;old_locus_tag=TS60_1136
NZ_LAEX01000008.1	Protein Homology	CDS	52384	52677	.	-	0	ID=cds-WP_011167167.1;Parent=gene-TS60_RS07670;Dbxref=GenBank:WP_011167167.1;Name=WP_011167167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167167.1;locus_tag=TS60_RS07670;product=hypothetical protein;protein_id=WP_011167167.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	52855	53133	.	-	.	ID=gene-TS60_RS07895;Name=TS60_RS07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS07895;partial=true;pseudo=true;start_range=.,52855
NZ_LAEX01000008.1	Protein Homology	CDS	52855	53133	.	-	0	ID=cds-TS60_RS07895;Parent=gene-TS60_RS07895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014757.6;locus_tag=TS60_RS07895;partial=true;product=helix-rich protein;pseudo=true;start_range=.,52855;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	53129	53905	.	-	.	ID=gene-TS60_RS06860;Name=TS60_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS06860;old_locus_tag=TS60_1137
NZ_LAEX01000008.1	Protein Homology	CDS	53129	53905	.	-	0	ID=cds-WP_011167168.1;Parent=gene-TS60_RS06860;Dbxref=GenBank:WP_011167168.1;Name=WP_011167168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167168.1;locus_tag=TS60_RS06860;product=helix-rich protein;protein_id=WP_011167168.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	53915	55333	.	-	.	ID=gene-TS60_RS05420;Name=TS60_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05420;old_locus_tag=TS60_1138
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	53915	55333	.	-	0	ID=cds-WP_045596725.1;Parent=gene-TS60_RS05420;Dbxref=GenBank:WP_045596725.1;Name=WP_045596725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS05420;product=helix-rich protein;protein_id=WP_045596725.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	55403	55861	.	-	.	ID=gene-TS60_RS05425;Name=TS60_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05425;old_locus_tag=TS60_1139
NZ_LAEX01000008.1	Protein Homology	CDS	55403	55861	.	-	0	ID=cds-WP_011167170.1;Parent=gene-TS60_RS05425;Dbxref=GenBank:WP_011167170.1;Name=WP_011167170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167170.1;locus_tag=TS60_RS05425;product=hypothetical protein;protein_id=WP_011167170.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	56177	56386	.	-	.	ID=gene-TS60_RS05430;Name=TS60_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05430;old_locus_tag=TS60_1140
NZ_LAEX01000008.1	Protein Homology	CDS	56177	56386	.	-	0	ID=cds-WP_011167171.1;Parent=gene-TS60_RS05430;Dbxref=GenBank:WP_011167171.1;Name=WP_011167171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167171.1;locus_tag=TS60_RS05430;product=hypothetical protein;protein_id=WP_011167171.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	56403	56687	.	+	.	ID=gene-TS60_RS07095;Name=TS60_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07095;old_locus_tag=TS60_1141
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	56403	56687	.	+	0	ID=cds-WP_015545255.1;Parent=gene-TS60_RS07095;Dbxref=GenBank:WP_015545255.1;Name=WP_015545255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07095;product=hypothetical protein;protein_id=WP_015545255.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	57065	58477	.	+	.	ID=gene-TS60_RS05435;Name=TS60_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05435;old_locus_tag=TS60_1142
NZ_LAEX01000008.1	Protein Homology	CDS	57065	58477	.	+	0	ID=cds-WP_011167174.1;Parent=gene-TS60_RS05435;Dbxref=GenBank:WP_011167174.1;Name=WP_011167174.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=TS60_RS05435;product=IS1634-like element ISMmy1 family transposase;protein_id=WP_011167174.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	58765	60437	.	+	.	ID=gene-TS60_RS05440;Name=TS60_RS05440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS05440;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	58765	60437	.	+	0	ID=cds-TS60_RS05440;Parent=gene-TS60_RS05440;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167015.1;locus_tag=TS60_RS05440;product=IS1634-like element IS1634 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	61369	61611	.	+	.	ID=gene-TS60_RS07900;Name=TS60_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07900
NZ_LAEX01000008.1	Protein Homology	CDS	61369	61611	.	+	0	ID=cds-WP_011167175.1;Parent=gene-TS60_RS07900;Dbxref=GenBank:WP_011167175.1;Name=WP_011167175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167175.1;locus_tag=TS60_RS07900;product=lipoprotein;protein_id=WP_011167175.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	61526	61795	.	+	.	ID=gene-TS60_RS07905;Name=TS60_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS07905;old_locus_tag=TS60_1145
NZ_LAEX01000008.1	GeneMarkS-2+	CDS	61526	61795	.	+	0	ID=cds-WP_107326366.1;Parent=gene-TS60_RS07905;Dbxref=GenBank:WP_107326366.1;Name=WP_107326366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=TS60_RS07905;product=hypothetical protein;protein_id=WP_107326366.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	pseudogene	61839	63248	.	-	.	ID=gene-TS60_RS06870;Name=TS60_RS06870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TS60_RS06870;pseudo=true
NZ_LAEX01000008.1	Protein Homology	CDS	61839	63248	.	-	0	ID=cds-TS60_RS06870;Parent=gene-TS60_RS06870;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=TS60_RS06870;product=IS3-like element IS1296 family transposase;pseudo=true;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	63333	65573	.	-	.	ID=gene-TS60_RS05470;Name=TS60_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05470;old_locus_tag=TS60_1149
NZ_LAEX01000008.1	Protein Homology	CDS	63333	65573	.	-	0	ID=cds-WP_045596728.1;Parent=gene-TS60_RS05470;Dbxref=GenBank:WP_045596728.1;Name=WP_045596728.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167180.1;locus_tag=TS60_RS05470;product=S8 family peptidase;protein_id=WP_045596728.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	65563	66612	.	-	.	ID=gene-TS60_RS05475;Name=TS60_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05475;old_locus_tag=TS60_1150
NZ_LAEX01000008.1	Protein Homology	CDS	65563	66612	.	-	0	ID=cds-WP_045596732.1;Parent=gene-TS60_RS05475;Dbxref=GenBank:WP_045596732.1;Name=WP_045596732.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545280.1;locus_tag=TS60_RS05475;product=ATP-binding protein;protein_id=WP_045596732.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	66809	67966	.	-	.	ID=gene-TS60_RS05480;Name=TS60_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05480;old_locus_tag=TS60_1151
NZ_LAEX01000008.1	Protein Homology	CDS	66809	67966	.	-	0	ID=cds-WP_015545469.1;Parent=gene-TS60_RS05480;Dbxref=GenBank:WP_015545469.1;Name=WP_015545469.1;Ontology_term=GO:0008610,GO:0046839,GO:0042577;gbkey=CDS;go_function=lipid phosphatase activity|0042577||IEA;go_process=lipid biosynthetic process|0008610||IEA,phospholipid dephosphorylation|0046839||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545469.1;locus_tag=TS60_RS05480;product=phosphatase PAP2 family protein;protein_id=WP_015545469.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	68024	68740	.	-	.	ID=gene-TS60_RS05485;Name=TS60_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05485;old_locus_tag=TS60_1152
NZ_LAEX01000008.1	Protein Homology	CDS	68024	68740	.	-	0	ID=cds-WP_015545424.1;Parent=gene-TS60_RS05485;Dbxref=GenBank:WP_015545424.1;Name=WP_015545424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863079.1;locus_tag=TS60_RS05485;product=phosphotransferase;protein_id=WP_015545424.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	68740	69534	.	-	.	ID=gene-TS60_RS05490;Name=TS60_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TS60_RS05490;old_locus_tag=TS60_1153
NZ_LAEX01000008.1	Protein Homology	CDS	68740	69534	.	-	0	ID=cds-WP_011167184.1;Parent=gene-TS60_RS05490;Dbxref=GenBank:WP_011167184.1;Name=WP_011167184.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863080.1;locus_tag=TS60_RS05490;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011167184.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	69611	70801	.	-	.	ID=gene-TS60_RS05495;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=TS60_RS05495;old_locus_tag=TS60_1154
NZ_LAEX01000008.1	Protein Homology	CDS	69611	70801	.	-	0	ID=cds-WP_011167185.1;Parent=gene-TS60_RS05495;Dbxref=GenBank:WP_011167185.1;Name=WP_011167185.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863081.1;locus_tag=TS60_RS05495;product=membrane protein insertase YidC;protein_id=WP_011167185.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	70819	71148	.	-	.	ID=gene-TS60_RS05500;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=TS60_RS05500;old_locus_tag=TS60_1155
NZ_LAEX01000008.1	Protein Homology	CDS	70819	71148	.	-	0	ID=cds-WP_011167186.1;Parent=gene-TS60_RS05500;Dbxref=GenBank:WP_011167186.1;Name=WP_011167186.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863082.1;locus_tag=TS60_RS05500;product=ribonuclease P protein component;protein_id=WP_011167186.1;transl_table=4
NZ_LAEX01000008.1	RefSeq	gene	71155	71289	.	-	.	ID=gene-TS60_RS05505;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=TS60_RS05505;old_locus_tag=TS60_1156
NZ_LAEX01000008.1	Protein Homology	CDS	71155	71289	.	-	0	ID=cds-WP_015545533.1;Parent=gene-TS60_RS05505;Dbxref=GenBank:WP_015545533.1;Name=WP_015545533.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269762.1;locus_tag=TS60_RS05505;product=50S ribosomal protein L34;protein_id=WP_015545533.1;transl_table=4
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