##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM303430v1
#!genome-build-accession NCBI_Assembly:GCF_003034305.1
#!annotation-date 08/02/2026 18:20:12
#!annotation-source NCBI RefSeq GCF_003034305.1-RS_2026_08_02
##sequence-region NZ_LAUX01000127.1 1 500
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000127.1	RefSeq	region	1	500	.	+	.	ID=NZ_LAUX01000127.1:1..500;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000127.1	RefSeq	gene	1	500	.	+	.	ID=gene-MSCD_RS04445;Name=MSCD_RS04445;end_range=500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04445;partial=true;start_range=.,1
NZ_LAUX01000127.1	Protein Homology	CDS	1	500	.	+	1	ID=cds-WP_258177044.1;Parent=gene-MSCD_RS04445;Dbxref=GenBank:WP_258177044.1;Name=WP_258177044.1;Ontology_term=GO:0006508,GO:0008236;end_range=500,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729460.1;locus_tag=MSCD_RS04445;partial=true;product=S41 family peptidase;protein_id=WP_258177044.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000128.1 1 1002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000128.1	RefSeq	region	1	1002	.	+	.	ID=NZ_LAUX01000128.1:1..1002;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000128.1	RefSeq	gene	84	1002	.	+	.	ID=gene-MSCD_RS04450;Name=MSCD_RS04450;end_range=1002,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04450;partial=true
NZ_LAUX01000128.1	Protein Homology	CDS	84	1002	.	+	0	ID=cds-WP_181256870.1;Parent=gene-MSCD_RS04450;Dbxref=GenBank:WP_181256870.1;Name=WP_181256870.1;Ontology_term=GO:0016020;end_range=1002,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167050.1;locus_tag=MSCD_RS04450;partial=true;product=lipoprotein;protein_id=WP_181256870.1;transl_table=4
##sequence-region NZ_LAUX01000129.1 1 506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000129.1	RefSeq	region	1	506	.	+	.	ID=NZ_LAUX01000129.1:1..506;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000129.1	RefSeq	gene	1	506	.	-	.	ID=gene-MSCD_RS04455;Name=MSCD_RS04455;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04455;partial=true;start_range=.,1
NZ_LAUX01000129.1	Protein Homology	CDS	1	506	.	-	0	ID=cds-WP_146146876.1;Parent=gene-MSCD_RS04455;Dbxref=GenBank:WP_146146876.1;Name=WP_146146876.1;end_range=506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166973.1;locus_tag=MSCD_RS04455;partial=true;product=BspA family leucine-rich repeat surface protein;protein_id=WP_146146876.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000130.1 1 629
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000130.1	RefSeq	region	1	629	.	+	.	ID=NZ_LAUX01000130.1:1..629;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000130.1	RefSeq	gene	262	629	.	-	.	ID=gene-MSCD_RS05035;Name=MSCD_RS05035;end_range=629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05035;partial=true
NZ_LAUX01000130.1	GeneMarkS-2+	CDS	262	629	.	-	2	ID=cds-WP_107646694.1;Parent=gene-MSCD_RS05035;Dbxref=GenBank:WP_107646694.1;Name=WP_107646694.1;end_range=629,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05035;partial=true;product=hypothetical protein;protein_id=WP_107646694.1;transl_table=4
##sequence-region NZ_LAUX01000079.1 1 10930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000079.1	RefSeq	region	1	10930	.	+	.	ID=NZ_LAUX01000079.1:1..10930;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000079.1	RefSeq	gene	1	545	.	+	.	ID=gene-MSCD_RS02640;Name=MSCD_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02640;partial=true;start_range=.,1
NZ_LAUX01000079.1	Protein Homology	CDS	1	545	.	+	2	ID=cds-WP_416371526.1;Parent=gene-MSCD_RS02640;Dbxref=GenBank:WP_416371526.1;Name=WP_416371526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447607.1;locus_tag=MSCD_RS02640;partial=true;product=hypothetical protein;protein_id=WP_416371526.1;start_range=.,1;transl_table=4
NZ_LAUX01000079.1	RefSeq	gene	547	1107	.	+	.	ID=gene-MSCD_RS02645;Name=MSCD_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02645;old_locus_tag=MSCd_4590
NZ_LAUX01000079.1	Protein Homology	CDS	547	1107	.	+	0	ID=cds-WP_011166488.1;Parent=gene-MSCD_RS02645;Dbxref=GenBank:WP_011166488.1;Name=WP_011166488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729398.1;locus_tag=MSCD_RS02645;product=hypothetical protein;protein_id=WP_011166488.1;transl_table=4
NZ_LAUX01000079.1	RefSeq	gene	1101	1691	.	+	.	ID=gene-MSCD_RS02650;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=MSCD_RS02650;old_locus_tag=MSCd_4600
NZ_LAUX01000079.1	Protein Homology	CDS	1101	1691	.	+	0	ID=cds-WP_011166487.1;Parent=gene-MSCD_RS02650;Dbxref=GenBank:WP_011166487.1;Name=WP_011166487.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269253.1;locus_tag=MSCD_RS02650;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_011166487.1;transl_table=4
NZ_LAUX01000079.1	RefSeq	gene	1700	4606	.	+	.	ID=gene-MSCD_RS02655;Name=MSCD_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02655;old_locus_tag=MSCd_4610
NZ_LAUX01000079.1	Protein Homology	CDS	1700	4606	.	+	0	ID=cds-WP_015545596.1;Parent=gene-MSCD_RS02655;Dbxref=GenBank:WP_015545596.1;Name=WP_015545596.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166486.1;locus_tag=MSCD_RS02655;product=cation-translocating P-type ATPase;protein_id=WP_015545596.1;transl_table=4
NZ_LAUX01000079.1	RefSeq	pseudogene	4633	6772	.	-	.	ID=gene-MSCD_RS02660;Name=MSCD_RS02660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02660;old_locus_tag=MSCd_4630;pseudo=true
NZ_LAUX01000079.1	Protein Homology	CDS	4633	6772	.	-	0	ID=cds-MSCD_RS02660;Parent=gene-MSCD_RS02660;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862605.1;locus_tag=MSCD_RS02660;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=4
NZ_LAUX01000079.1	RefSeq	pseudogene	6928	9213	.	-	.	ID=gene-MSCD_RS05665;Name=MSCD_RS05665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05665;pseudo=true
NZ_LAUX01000079.1	Protein Homology	CDS	6928	9213	.	-	0	ID=cds-MSCD_RS05665;Parent=gene-MSCD_RS05665;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584458.1;locus_tag=MSCD_RS05665;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
NZ_LAUX01000079.1	RefSeq	gene	9224	9457	.	-	.	ID=gene-MSCD_RS05350;Name=MSCD_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05350
NZ_LAUX01000079.1	GeneMarkS-2+	CDS	9224	9457	.	-	0	ID=cds-WP_011166481.1;Parent=gene-MSCD_RS05350;Dbxref=GenBank:WP_011166481.1;Name=WP_011166481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05350;product=hypothetical protein;protein_id=WP_011166481.1;transl_table=4
NZ_LAUX01000079.1	RefSeq	gene	10091	10909	.	-	.	ID=gene-MSCD_RS05355;Name=MSCD_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05355
NZ_LAUX01000079.1	GeneMarkS-2+	CDS	10091	10909	.	-	0	ID=cds-WP_011166479.1;Parent=gene-MSCD_RS05355;Dbxref=GenBank:WP_011166479.1;Name=WP_011166479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05355;product=hypothetical protein;protein_id=WP_011166479.1;transl_table=4
##sequence-region NZ_LAUX01000080.1 1 10041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000080.1	RefSeq	region	1	10041	.	+	.	ID=NZ_LAUX01000080.1:1..10041;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000080.1	RefSeq	gene	146	1333	.	-	.	ID=gene-MSCD_RS02690;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=MSCD_RS02690;old_locus_tag=MSCd_4680
NZ_LAUX01000080.1	Protein Homology	CDS	146	1333	.	-	0	ID=cds-WP_011166477.1;Parent=gene-MSCD_RS02690;Dbxref=GenBank:WP_011166477.1;Name=WP_011166477.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269250.1;locus_tag=MSCD_RS02690;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_011166477.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	1341	3128	.	-	.	ID=gene-MSCD_RS02695;Name=MSCD_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02695;old_locus_tag=MSCd_4690
NZ_LAUX01000080.1	Protein Homology	CDS	1341	3128	.	-	0	ID=cds-WP_015545314.1;Parent=gene-MSCD_RS02695;Dbxref=GenBank:WP_015545314.1;Name=WP_015545314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545314.1;locus_tag=MSCD_RS02695;product=hypothetical protein;protein_id=WP_015545314.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	3383	4009	.	+	.	ID=gene-MSCD_RS02700;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=MSCD_RS02700;old_locus_tag=MSCd_4700
NZ_LAUX01000080.1	Protein Homology	CDS	3383	4009	.	+	0	ID=cds-WP_011166475.1;Parent=gene-MSCD_RS02700;Dbxref=GenBank:WP_011166475.1;Name=WP_011166475.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429135.1;locus_tag=MSCD_RS02700;product=30S ribosomal protein S4;protein_id=WP_011166475.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	4054	4449	.	-	.	ID=gene-MSCD_RS02705;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=MSCD_RS02705;old_locus_tag=MSCd_4710
NZ_LAUX01000080.1	Protein Homology	CDS	4054	4449	.	-	0	ID=cds-WP_015545461.1;Parent=gene-MSCD_RS02705;Dbxref=GenBank:WP_015545461.1;Name=WP_015545461.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545461.1;locus_tag=MSCD_RS02705;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_015545461.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	4457	5083	.	-	.	ID=gene-MSCD_RS02710;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=MSCD_RS02710;old_locus_tag=MSCd_4720
NZ_LAUX01000080.1	Protein Homology	CDS	4457	5083	.	-	0	ID=cds-WP_011166473.1;Parent=gene-MSCD_RS02710;Dbxref=GenBank:WP_011166473.1;Name=WP_011166473.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697967.1;locus_tag=MSCD_RS02710;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_011166473.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	5447	5911	.	-	.	ID=gene-MSCD_RS02720;Name=MSCD_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02720;old_locus_tag=MSCd_4730
NZ_LAUX01000080.1	Protein Homology	CDS	5447	5911	.	-	0	ID=cds-WP_011166471.1;Parent=gene-MSCD_RS02720;Dbxref=GenBank:WP_011166471.1;Name=WP_011166471.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447592.1;locus_tag=MSCD_RS02720;product=PTS sugar transporter subunit IIA;protein_id=WP_011166471.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	5991	7712	.	-	.	ID=gene-MSCD_RS02725;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=MSCD_RS02725;old_locus_tag=MSCd_4740
NZ_LAUX01000080.1	Protein Homology	CDS	5991	7712	.	-	0	ID=cds-WP_011166470.1;Parent=gene-MSCD_RS02725;Dbxref=GenBank:WP_011166470.1;Name=WP_011166470.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545277.1;locus_tag=MSCD_RS02725;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_011166470.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	7806	8228	.	-	.	ID=gene-MSCD_RS02730;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=MSCD_RS02730;old_locus_tag=MSCd_4750
NZ_LAUX01000080.1	Protein Homology	CDS	7806	8228	.	-	0	ID=cds-WP_011166469.1;Parent=gene-MSCD_RS02730;Dbxref=GenBank:WP_011166469.1;Name=WP_011166469.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387120.1;locus_tag=MSCD_RS02730;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_011166469.1;transl_table=4
NZ_LAUX01000080.1	RefSeq	gene	8238	10040	.	-	.	ID=gene-MSCD_RS02735;Name=MSCD_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02735
NZ_LAUX01000080.1	Protein Homology	CDS	8238	10040	.	-	0	ID=cds-WP_258177031.1;Parent=gene-MSCD_RS02735;Dbxref=GenBank:WP_258177031.1;Name=WP_258177031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387119.1;locus_tag=MSCD_RS02735;product=MIP family Ig-specific serine endopeptidase;protein_id=WP_258177031.1;transl_table=4
##sequence-region NZ_LAUX01000081.1 1 19283
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000081.1	RefSeq	region	1	19283	.	+	.	ID=NZ_LAUX01000081.1:1..19283;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000081.1	RefSeq	gene	197	1378	.	-	.	ID=gene-MSCD_RS02740;Name=MSCD_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02740;old_locus_tag=MSCd_4760
NZ_LAUX01000081.1	Protein Homology	CDS	197	1378	.	-	0	ID=cds-WP_011166467.1;Parent=gene-MSCD_RS02740;Dbxref=GenBank:WP_011166467.1;Name=WP_011166467.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862594.1;locus_tag=MSCD_RS02740;product=acetate kinase;protein_id=WP_011166467.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	1391	2359	.	-	.	ID=gene-MSCD_RS02745;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=MSCD_RS02745;old_locus_tag=MSCd_4770
NZ_LAUX01000081.1	Protein Homology	CDS	1391	2359	.	-	0	ID=cds-WP_011166466.1;Parent=gene-MSCD_RS02745;Dbxref=GenBank:WP_011166466.1;Name=WP_011166466.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697973.1;locus_tag=MSCD_RS02745;product=phosphate acetyltransferase;protein_id=WP_011166466.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	2381	4168	.	-	.	ID=gene-MSCD_RS02750;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=MSCD_RS02750;old_locus_tag=MSCd_4780
NZ_LAUX01000081.1	Protein Homology	CDS	2381	4168	.	-	0	ID=cds-WP_011166465.1;Parent=gene-MSCD_RS02750;Dbxref=GenBank:WP_011166465.1;Name=WP_011166465.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:TIGR01350.1;locus_tag=MSCD_RS02750;product=dihydrolipoyl dehydrogenase;protein_id=WP_011166465.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	4187	5473	.	-	.	ID=gene-MSCD_RS02755;Name=MSCD_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02755;old_locus_tag=MSCd_4790
NZ_LAUX01000081.1	Protein Homology	CDS	4187	5473	.	-	0	ID=cds-WP_011166464.1;Parent=gene-MSCD_RS02755;Dbxref=GenBank:WP_011166464.1;Name=WP_011166464.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387115.1;locus_tag=MSCD_RS02755;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_011166464.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	5502	6491	.	-	.	ID=gene-MSCD_RS02760;Name=MSCD_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02760;old_locus_tag=MSCd_4800
NZ_LAUX01000081.1	Protein Homology	CDS	5502	6491	.	-	0	ID=cds-WP_013447584.1;Parent=gene-MSCD_RS02760;Dbxref=GenBank:WP_013447584.1;Name=WP_013447584.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697976.1;locus_tag=MSCD_RS02760;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_013447584.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	6491	7603	.	-	.	ID=gene-MSCD_RS02765;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=MSCD_RS02765;old_locus_tag=MSCd_4810
NZ_LAUX01000081.1	Protein Homology	CDS	6491	7603	.	-	0	ID=cds-WP_011166462.1;Parent=gene-MSCD_RS02765;Dbxref=GenBank:WP_011166462.1;Name=WP_011166462.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697977.1;locus_tag=MSCD_RS02765;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_011166462.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	7647	8651	.	-	.	ID=gene-MSCD_RS02770;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=MSCD_RS02770;old_locus_tag=MSCd_4820
NZ_LAUX01000081.1	Protein Homology	CDS	7647	8651	.	-	0	ID=cds-WP_107682097.1;Parent=gene-MSCD_RS02770;Dbxref=GenBank:WP_107682097.1;Name=WP_107682097.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862590.1;locus_tag=MSCD_RS02770;product=lipoate--protein ligase;protein_id=WP_107682097.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	8654	10018	.	-	.	ID=gene-MSCD_RS02775;Name=MSCD_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02775;old_locus_tag=MSCd_4830
NZ_LAUX01000081.1	Protein Homology	CDS	8654	10018	.	-	0	ID=cds-WP_011166460.1;Parent=gene-MSCD_RS02775;Dbxref=GenBank:WP_011166460.1;Name=WP_011166460.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545267.1;locus_tag=MSCD_RS02775;product=FAD-dependent oxidoreductase;protein_id=WP_011166460.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	10692	12611	.	-	.	ID=gene-MSCD_RS02780;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=MSCD_RS02780;old_locus_tag=MSCd_4840
NZ_LAUX01000081.1	Protein Homology	CDS	10692	12611	.	-	0	ID=cds-WP_011166459.1;Parent=gene-MSCD_RS02780;Dbxref=GenBank:WP_011166459.1;Name=WP_011166459.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862589.1;locus_tag=MSCD_RS02780;product=threonine--tRNA ligase;protein_id=WP_011166459.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	12878	14314	.	-	.	ID=gene-MSCD_RS02785;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=MSCD_RS02785;old_locus_tag=MSCd_4850
NZ_LAUX01000081.1	Protein Homology	CDS	12878	14314	.	-	0	ID=cds-WP_045596463.1;Parent=gene-MSCD_RS02785;Dbxref=GenBank:WP_045596463.1;Name=WP_045596463.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862588.1;locus_tag=MSCD_RS02785;product=pyruvate kinase;protein_id=WP_045596463.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	14386	15366	.	-	.	ID=gene-MSCD_RS02790;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=MSCD_RS02790;old_locus_tag=MSCd_4860
NZ_LAUX01000081.1	Protein Homology	CDS	14386	15366	.	-	0	ID=cds-WP_015545480.1;Parent=gene-MSCD_RS02790;Dbxref=GenBank:WP_015545480.1;Name=WP_015545480.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697981.1;locus_tag=MSCD_RS02790;product=6-phosphofructokinase;protein_id=WP_015545480.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	15700	16863	.	+	.	ID=gene-MSCD_RS02795;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=MSCD_RS02795;old_locus_tag=MSCd_4870
NZ_LAUX01000081.1	Protein Homology	CDS	15700	16863	.	+	0	ID=cds-WP_015545438.1;Parent=gene-MSCD_RS02795;Dbxref=GenBank:WP_015545438.1;Name=WP_015545438.1;gbkey=CDS;gene=glpO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862587.1;locus_tag=MSCD_RS02795;product=type 2 glycerol-3-phosphate oxidase;protein_id=WP_015545438.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	16880	18397	.	+	.	ID=gene-MSCD_RS02800;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=MSCD_RS02800;old_locus_tag=MSCd_4880
NZ_LAUX01000081.1	Protein Homology	CDS	16880	18397	.	+	0	ID=cds-WP_107682098.1;Parent=gene-MSCD_RS02800;Dbxref=GenBank:WP_107682098.1;Name=WP_107682098.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729427.1;locus_tag=MSCD_RS02800;product=glycerol kinase GlpK;protein_id=WP_107682098.1;transl_table=4
NZ_LAUX01000081.1	RefSeq	gene	18433	19212	.	+	.	ID=gene-MSCD_RS02805;Name=MSCD_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02805;old_locus_tag=MSCd_4890
NZ_LAUX01000081.1	Protein Homology	CDS	18433	19212	.	+	0	ID=cds-WP_011166454.1;Parent=gene-MSCD_RS02805;Dbxref=GenBank:WP_011166454.1;Name=WP_011166454.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269232.1;locus_tag=MSCD_RS02805;product=MIP/aquaporin family protein;protein_id=WP_011166454.1;transl_table=4
##sequence-region NZ_LAUX01000082.1 1 2571
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000082.1	RefSeq	region	1	2571	.	+	.	ID=NZ_LAUX01000082.1:1..2571;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000082.1	RefSeq	gene	339	1343	.	+	.	ID=gene-MSCD_RS02810;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=MSCD_RS02810;old_locus_tag=MSCd_4900
NZ_LAUX01000082.1	Protein Homology	CDS	339	1343	.	+	0	ID=cds-WP_011167120.1;Parent=gene-MSCD_RS02810;Dbxref=GenBank:WP_011167120.1;Name=WP_011167120.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167127.1;locus_tag=MSCD_RS02810;product=UDP-glucose 4-epimerase GalE;protein_id=WP_011167120.1;transl_table=4
NZ_LAUX01000082.1	RefSeq	gene	1356	2282	.	+	.	ID=gene-MSCD_RS02815;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=MSCD_RS02815;old_locus_tag=MSCd_4910
NZ_LAUX01000082.1	Protein Homology	CDS	1356	2282	.	+	0	ID=cds-WP_060954726.1;Parent=gene-MSCD_RS02815;Dbxref=GenBank:WP_060954726.1;Name=WP_060954726.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167126.1;locus_tag=MSCD_RS02815;product=UDP-galactopyranose mutase;protein_id=WP_060954726.1;transl_table=4
NZ_LAUX01000082.1	RefSeq	gene	2303	2542	.	+	.	ID=gene-MSCD_RS05360;Name=MSCD_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05360
NZ_LAUX01000082.1	Protein Homology	CDS	2303	2542	.	+	0	ID=cds-WP_250635719.1;Parent=gene-MSCD_RS05360;Dbxref=GenBank:WP_250635719.1;Name=WP_250635719.1;Ontology_term=GO:0008767;gbkey=CDS;go_function=UDP-galactopyranose mutase activity|0008767||IEA;inference=COORDINATES: protein motif:HMM:NF015247.7;locus_tag=MSCD_RS05360;product=UDP-galactopyranose mutase;protein_id=WP_250635719.1;transl_table=4
##sequence-region NZ_LAUX01000083.1 1 12798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000083.1	RefSeq	region	1	12798	.	+	.	ID=NZ_LAUX01000083.1:1..12798;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000083.1	RefSeq	pseudogene	1	182	.	-	.	ID=gene-MSCD_RS02825;Name=MSCD_RS02825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02825;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000083.1	Protein Homology	CDS	1	182	.	-	0	ID=cds-MSCD_RS02825;Parent=gene-MSCD_RS02825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447480.1;locus_tag=MSCD_RS02825;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000083.1	RefSeq	gene	175	1620	.	-	.	ID=gene-MSCD_RS02830;Name=MSCD_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02830;old_locus_tag=MSCd_4920
NZ_LAUX01000083.1	Protein Homology	CDS	175	1620	.	-	0	ID=cds-WP_015545361.1;Parent=gene-MSCD_RS02830;Dbxref=GenBank:WP_015545361.1;Name=WP_015545361.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447479.1;locus_tag=MSCD_RS02830;product=ABC transporter ATP-binding protein;protein_id=WP_015545361.1;transl_table=4
NZ_LAUX01000083.1	RefSeq	gene	1628	2638	.	-	.	ID=gene-MSCD_RS02835;Name=MSCD_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02835;old_locus_tag=MSCd_4930
NZ_LAUX01000083.1	Protein Homology	CDS	1628	2638	.	-	0	ID=cds-WP_011167115.1;Parent=gene-MSCD_RS02835;Dbxref=GenBank:WP_011167115.1;Name=WP_011167115.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863025.1;locus_tag=MSCD_RS02835;product=ABC transporter permease;protein_id=WP_011167115.1;transl_table=4
NZ_LAUX01000083.1	RefSeq	gene	2640	3713	.	-	.	ID=gene-MSCD_RS02840;Name=MSCD_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02840;old_locus_tag=MSCd_4940
NZ_LAUX01000083.1	Protein Homology	CDS	2640	3713	.	-	0	ID=cds-WP_011167114.1;Parent=gene-MSCD_RS02840;Dbxref=GenBank:WP_011167114.1;Name=WP_011167114.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698074.1;locus_tag=MSCD_RS02840;product=ABC transporter permease;protein_id=WP_011167114.1;transl_table=4
NZ_LAUX01000083.1	RefSeq	gene	3713	6670	.	-	.	ID=gene-MSCD_RS02845;Name=MSCD_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02845;old_locus_tag=MSCd_4950
NZ_LAUX01000083.1	Protein Homology	CDS	3713	6670	.	-	0	ID=cds-WP_011167113.1;Parent=gene-MSCD_RS02845;Dbxref=GenBank:WP_011167113.1;Name=WP_011167113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863024.1;locus_tag=MSCD_RS02845;product=periplasmic substrate-binding domain-containing protein;protein_id=WP_011167113.1;transl_table=4
NZ_LAUX01000083.1	RefSeq	gene	6680	12598	.	-	.	ID=gene-MSCD_RS02850;Name=MSCD_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02850;old_locus_tag=MSCd_4960
NZ_LAUX01000083.1	Protein Homology	CDS	6680	12598	.	-	0	ID=cds-WP_015545321.1;Parent=gene-MSCD_RS02850;Dbxref=GenBank:WP_015545321.1;Name=WP_015545321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167112.1;locus_tag=MSCD_RS02850;product=PDxFFG protein;protein_id=WP_015545321.1;transl_table=4
##sequence-region NZ_LAUX01000084.1 1 16720
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000084.1	RefSeq	region	1	16720	.	+	.	ID=NZ_LAUX01000084.1:1..16720;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000084.1	RefSeq	gene	113	754	.	-	.	ID=gene-MSCD_RS02855;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=MSCD_RS02855;old_locus_tag=MSCd_4970
NZ_LAUX01000084.1	Protein Homology	CDS	113	754	.	-	0	ID=cds-WP_107682099.1;Parent=gene-MSCD_RS02855;Dbxref=GenBank:WP_107682099.1;Name=WP_107682099.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729924.1;locus_tag=MSCD_RS02855;product=transcription termination/antitermination protein NusG;protein_id=WP_107682099.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	771	1085	.	-	.	ID=gene-MSCD_RS02860;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=MSCD_RS02860;old_locus_tag=MSCd_4980
NZ_LAUX01000084.1	Protein Homology	CDS	771	1085	.	-	0	ID=cds-WP_011167110.1;Parent=gene-MSCD_RS02860;Dbxref=GenBank:WP_011167110.1;Name=WP_011167110.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698077.1;locus_tag=MSCD_RS02860;product=preprotein translocase subunit SecE;protein_id=WP_011167110.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	1085	1246	.	-	.	ID=gene-MSCD_RS02865;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=MSCD_RS02865;old_locus_tag=MSCd_4990
NZ_LAUX01000084.1	Protein Homology	CDS	1085	1246	.	-	0	ID=cds-WP_013729926.1;Parent=gene-MSCD_RS02865;Dbxref=GenBank:WP_013729926.1;Name=WP_013729926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387009.1;locus_tag=MSCD_RS02865;product=50S ribosomal protein L33;protein_id=WP_013729926.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	1307	2041	.	-	.	ID=gene-MSCD_RS02870;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=MSCD_RS02870;old_locus_tag=MSCd_5000
NZ_LAUX01000084.1	Protein Homology	CDS	1307	2041	.	-	0	ID=cds-WP_011167109.1;Parent=gene-MSCD_RS02870;Dbxref=GenBank:WP_011167109.1;Name=WP_011167109.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698078.1;locus_tag=MSCD_RS02870;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_011167109.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	2043	3368	.	-	.	ID=gene-MSCD_RS02875;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=MSCD_RS02875;old_locus_tag=MSCd_5010
NZ_LAUX01000084.1	Protein Homology	CDS	2043	3368	.	-	0	ID=cds-WP_011167108.1;Parent=gene-MSCD_RS02875;Dbxref=GenBank:WP_011167108.1;Name=WP_011167108.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863020.1;locus_tag=MSCD_RS02875;product=cysteine--tRNA ligase;protein_id=WP_011167108.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	3377	4303	.	-	.	ID=gene-MSCD_RS02880;Name=MSCD_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02880;old_locus_tag=MSCd_5020
NZ_LAUX01000084.1	Protein Homology	CDS	3377	4303	.	-	0	ID=cds-WP_045596681.1;Parent=gene-MSCD_RS02880;Dbxref=GenBank:WP_045596681.1;Name=WP_045596681.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863019.1;locus_tag=MSCD_RS02880;product=ECF transporter S component;protein_id=WP_045596681.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	4446	5747	.	-	.	ID=gene-MSCD_RS02885;Name=MSCD_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02885;old_locus_tag=MSCd_5030
NZ_LAUX01000084.1	Protein Homology	CDS	4446	5747	.	-	0	ID=cds-WP_011167106.1;Parent=gene-MSCD_RS02885;Dbxref=GenBank:WP_011167106.1;Name=WP_011167106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167106.1;locus_tag=MSCD_RS02885;product=hypothetical protein;protein_id=WP_011167106.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	5814	7130	.	-	.	ID=gene-MSCD_RS02890;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=MSCD_RS02890;old_locus_tag=MSCd_5040
NZ_LAUX01000084.1	Protein Homology	CDS	5814	7130	.	-	0	ID=cds-WP_015545685.1;Parent=gene-MSCD_RS02890;Dbxref=GenBank:WP_015545685.1;Name=WP_015545685.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729931.1;locus_tag=MSCD_RS02890;product=replicative DNA helicase;protein_id=WP_015545685.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	7115	7576	.	-	.	ID=gene-MSCD_RS02895;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=MSCD_RS02895;old_locus_tag=MSCd_5050
NZ_LAUX01000084.1	Protein Homology	CDS	7115	7576	.	-	0	ID=cds-WP_015545494.1;Parent=gene-MSCD_RS02895;Dbxref=GenBank:WP_015545494.1;Name=WP_015545494.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545494.1;locus_tag=MSCD_RS02895;product=50S ribosomal protein L9;protein_id=WP_015545494.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	7697	8257	.	-	.	ID=gene-MSCD_RS02900;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=MSCD_RS02900;old_locus_tag=MSCd_5060
NZ_LAUX01000084.1	Protein Homology	CDS	7697	8257	.	-	0	ID=cds-WP_011167103.1;Parent=gene-MSCD_RS02900;Dbxref=GenBank:WP_011167103.1;Name=WP_011167103.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387002.1;locus_tag=MSCD_RS02900;product=aminoacyl-tRNA hydrolase;protein_id=WP_011167103.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	8439	8588	.	-	.	ID=gene-MSCD_RS02905;Name=MSCD_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02905;old_locus_tag=MSCd_5070
NZ_LAUX01000084.1	Protein Homology	CDS	8439	8588	.	-	0	ID=cds-WP_011167102.1;Parent=gene-MSCD_RS02905;Dbxref=GenBank:WP_011167102.1;Name=WP_011167102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167102.1;locus_tag=MSCD_RS02905;product=hypothetical protein;protein_id=WP_011167102.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	8678	9712	.	-	.	ID=gene-MSCD_RS02910;Name=MSCD_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02910;old_locus_tag=MSCd_5080
NZ_LAUX01000084.1	Protein Homology	CDS	8678	9712	.	-	0	ID=cds-WP_015545575.1;Parent=gene-MSCD_RS02910;Dbxref=GenBank:WP_015545575.1;Name=WP_015545575.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0002189;gbkey=CDS;go_component=ribose phosphate diphosphokinase complex|0002189||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698084.1;locus_tag=MSCD_RS02910;product=ribose-phosphate diphosphokinase;protein_id=WP_015545575.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	9837	10136	.	-	.	ID=gene-MSCD_RS05365;Name=MSCD_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05365;old_locus_tag=MSCd_5090
NZ_LAUX01000084.1	Protein Homology	CDS	9837	10136	.	-	0	ID=cds-WP_049764043.1;Parent=gene-MSCD_RS05365;Dbxref=GenBank:WP_049764043.1;Name=WP_049764043.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=MSCD_RS05365;product=DNA methyltransferase;protein_id=WP_049764043.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	10076	11623	.	-	.	ID=gene-MSCD_RS02920;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=MSCD_RS02920;old_locus_tag=MSCd_5100
NZ_LAUX01000084.1	Protein Homology	CDS	10076	11623	.	-	0	ID=cds-WP_107326325.1;Parent=gene-MSCD_RS02920;Dbxref=GenBank:WP_107326325.1;Name=WP_107326325.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF012372.7;locus_tag=MSCD_RS02920;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_107326325.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	11711	12649	.	+	.	ID=gene-MSCD_RS02925;Name=MSCD_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02925;old_locus_tag=MSCd_5110
NZ_LAUX01000084.1	Protein Homology	CDS	11711	12649	.	+	0	ID=cds-WP_011167098.1;Parent=gene-MSCD_RS02925;Dbxref=GenBank:WP_011167098.1;Name=WP_011167098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167098.1;locus_tag=MSCD_RS02925;product=hypothetical protein;protein_id=WP_011167098.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	12652	12885	.	+	.	ID=gene-MSCD_RS05780;Name=MSCD_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05780
NZ_LAUX01000084.1	Protein Homology	CDS	12652	12885	.	+	0	ID=cds-WP_416371508.1;Parent=gene-MSCD_RS05780;Dbxref=GenBank:WP_416371508.1;Name=WP_416371508.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013964.7;locus_tag=MSCD_RS05780;product=HNH endonuclease;protein_id=WP_416371508.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	12899	13102	.	-	.	ID=gene-MSCD_RS02935;Name=MSCD_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02935
NZ_LAUX01000084.1	Protein Homology	CDS	12899	13102	.	-	0	ID=cds-WP_011167097.1;Parent=gene-MSCD_RS02935;Dbxref=GenBank:WP_011167097.1;Name=WP_011167097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167097.1;locus_tag=MSCD_RS02935;product=hypothetical protein;protein_id=WP_011167097.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	13156	13953	.	-	.	ID=gene-MSCD_RS02940;Name=MSCD_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02940;old_locus_tag=MSCd_5120
NZ_LAUX01000084.1	Protein Homology	CDS	13156	13953	.	-	0	ID=cds-WP_015545398.1;Parent=gene-MSCD_RS02940;Dbxref=GenBank:WP_015545398.1;Name=WP_015545398.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863015.1;locus_tag=MSCD_RS02940;product=TatD family hydrolase;protein_id=WP_015545398.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	14089	14163	.	-	.	ID=gene-MSCD_RS02945;Name=MSCD_RS02945;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS02945;old_locus_tag=MSCd_5130
NZ_LAUX01000084.1	tRNAscan-SE	tRNA	14089	14163	.	-	.	ID=rna-MSCD_RS02945;Parent=gene-MSCD_RS02945;anticodon=(pos:complement(14128..14130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS02945;product=tRNA-Cys
NZ_LAUX01000084.1	tRNAscan-SE	exon	14089	14163	.	-	.	ID=exon-MSCD_RS02945-1;Parent=rna-MSCD_RS02945;anticodon=(pos:complement(14128..14130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS02945;product=tRNA-Cys
NZ_LAUX01000084.1	RefSeq	gene	14329	15798	.	-	.	ID=gene-MSCD_RS02950;Name=MSCD_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02950;old_locus_tag=MSCd_5140
NZ_LAUX01000084.1	Protein Homology	CDS	14329	15798	.	-	0	ID=cds-WP_015545509.1;Parent=gene-MSCD_RS02950;Dbxref=GenBank:WP_015545509.1;Name=WP_015545509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167095.1;locus_tag=MSCD_RS02950;product=hypothetical protein;protein_id=WP_015545509.1;transl_table=4
NZ_LAUX01000084.1	RefSeq	gene	15801	16718	.	-	.	ID=gene-MSCD_RS02955;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=MSCD_RS02955
NZ_LAUX01000084.1	Protein Homology	CDS	15801	16718	.	-	0	ID=cds-WP_107682100.1;Parent=gene-MSCD_RS02955;Dbxref=GenBank:WP_107682100.1;Name=WP_107682100.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863013.1;locus_tag=MSCD_RS02955;product=DNA polymerase III subunit delta;protein_id=WP_107682100.1;transl_table=4
##sequence-region NZ_LAUX01000085.1 1 9100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000085.1	RefSeq	region	1	9100	.	+	.	ID=NZ_LAUX01000085.1:1..9100;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000085.1	RefSeq	gene	102	2099	.	+	.	ID=gene-MSCD_RS02960;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=MSCD_RS02960;old_locus_tag=MSCd_5150
NZ_LAUX01000085.1	Protein Homology	CDS	102	2099	.	+	0	ID=cds-WP_015545642.1;Parent=gene-MSCD_RS02960;Dbxref=GenBank:WP_015545642.1;Name=WP_015545642.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863012.1;locus_tag=MSCD_RS02960;product=excinuclease ABC subunit UvrB;protein_id=WP_015545642.1;transl_table=4
NZ_LAUX01000085.1	RefSeq	gene	2108	4948	.	+	.	ID=gene-MSCD_RS02965;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=MSCD_RS02965;old_locus_tag=MSCd_5160
NZ_LAUX01000085.1	Protein Homology	CDS	2108	4948	.	+	0	ID=cds-WP_015545467.1;Parent=gene-MSCD_RS02965;Dbxref=GenBank:WP_015545467.1;Name=WP_015545467.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863011.1;locus_tag=MSCD_RS02965;product=excinuclease ABC subunit UvrA;protein_id=WP_015545467.1;transl_table=4
NZ_LAUX01000085.1	RefSeq	gene	4941	6050	.	+	.	ID=gene-MSCD_RS02970;Name=MSCD_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02970;old_locus_tag=MSCd_5170
NZ_LAUX01000085.1	Protein Homology	CDS	4941	6050	.	+	0	ID=cds-WP_011167091.1;Parent=gene-MSCD_RS02970;Dbxref=GenBank:WP_011167091.1;Name=WP_011167091.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167091.1;locus_tag=MSCD_RS02970;product=Mur ligase family protein;protein_id=WP_011167091.1;transl_table=4
NZ_LAUX01000085.1	RefSeq	gene	6078	6752	.	+	.	ID=gene-MSCD_RS02975;Name=MSCD_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02975;old_locus_tag=MSCd_5180
NZ_LAUX01000085.1	Protein Homology	CDS	6078	6752	.	+	0	ID=cds-WP_107682101.1;Parent=gene-MSCD_RS02975;Dbxref=GenBank:WP_107682101.1;Name=WP_107682101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448048.1;locus_tag=MSCD_RS02975;product=folate family ECF transporter S component;protein_id=WP_107682101.1;transl_table=4
NZ_LAUX01000085.1	RefSeq	gene	6831	7772	.	+	.	ID=gene-MSCD_RS02980;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=MSCD_RS02980;old_locus_tag=MSCd_5190
NZ_LAUX01000085.1	Protein Homology	CDS	6831	7772	.	+	0	ID=cds-WP_107682102.1;Parent=gene-MSCD_RS02980;Dbxref=GenBank:WP_107682102.1;Name=WP_107682102.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698093.1;locus_tag=MSCD_RS02980;product=HPr(Ser) kinase/phosphatase;protein_id=WP_107682102.1;transl_table=4
NZ_LAUX01000085.1	RefSeq	pseudogene	7783	9090	.	+	.	ID=gene-MSCD_RS02985;Name=MSCD_RS02985;end_range=9090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02985;old_locus_tag=MSCd_5200;partial=true;pseudo=true
NZ_LAUX01000085.1	Protein Homology	CDS	7783	9090	.	+	0	ID=cds-MSCD_RS02985;Parent=gene-MSCD_RS02985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042158,GO:0008961,GO:0005886;end_range=9090,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698094.1;locus_tag=MSCD_RS02985;partial=true;product=prolipoprotein diacylglyceryl transferase family protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000086.1 1 4002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000086.1	RefSeq	region	1	4002	.	+	.	ID=NZ_LAUX01000086.1:1..4002;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000086.1	RefSeq	pseudogene	1	301	.	+	.	ID=gene-MSCD_RS05005;Name=MSCD_RS05005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05005;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000086.1	Protein Homology	CDS	1	301	.	+	1	ID=cds-MSCD_RS05005;Parent=gene-MSCD_RS05005;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698094.1;locus_tag=MSCD_RS05005;partial=true;product=diacylglyceryl transferase;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000086.1	RefSeq	gene	285	1217	.	+	.	ID=gene-MSCD_RS02995;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=MSCD_RS02995;old_locus_tag=MSCd_5210
NZ_LAUX01000086.1	Protein Homology	CDS	285	1217	.	+	0	ID=cds-WP_011167087.1;Parent=gene-MSCD_RS02995;Dbxref=GenBank:WP_011167087.1;Name=WP_011167087.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863007.1;locus_tag=MSCD_RS02995;product=thioredoxin-disulfide reductase;protein_id=WP_011167087.1;transl_table=4
NZ_LAUX01000086.1	RefSeq	pseudogene	1226	2657	.	+	.	ID=gene-MSCD_RS05670;Name=MSCD_RS05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05670;old_locus_tag=MSCd_5230;pseudo=true
NZ_LAUX01000086.1	Protein Homology	CDS	1226	2657	.	+	0	ID=cds-MSCD_RS05670;Parent=gene-MSCD_RS05670;Note=frameshifted;Ontology_term=GO:0009249,GO:0042158,GO:0008961,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387613.1;locus_tag=MSCD_RS05670;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=4
NZ_LAUX01000086.1	RefSeq	gene	2669	3598	.	+	.	ID=gene-MSCD_RS03005;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=MSCD_RS03005;old_locus_tag=MSCd_5240
NZ_LAUX01000086.1	Protein Homology	CDS	2669	3598	.	+	0	ID=cds-WP_011167084.1;Parent=gene-MSCD_RS03005;Dbxref=GenBank:WP_011167084.1;Name=WP_011167084.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269687.1;locus_tag=MSCD_RS03005;product=DNA-binding protein WhiA;protein_id=WP_011167084.1;transl_table=4
##sequence-region NZ_LAUX01000087.1 1 4099
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000087.1	RefSeq	region	1	4099	.	+	.	ID=NZ_LAUX01000087.1:1..4099;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000087.1	RefSeq	gene	1	192	.	+	.	ID=gene-MSCD_RS04915;Name=MSCD_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04915;partial=true;start_range=.,1
NZ_LAUX01000087.1	GeneMarkS-2+	CDS	1	192	.	+	0	ID=cds-WP_181256861.1;Parent=gene-MSCD_RS04915;Dbxref=GenBank:WP_181256861.1;Name=WP_181256861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS04915;partial=true;product=hypothetical protein;protein_id=WP_181256861.1;start_range=.,1;transl_table=4
NZ_LAUX01000087.1	RefSeq	gene	225	545	.	+	.	ID=gene-MSCD_RS03015;Name=MSCD_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03015;old_locus_tag=MSCd_5250
NZ_LAUX01000087.1	Protein Homology	CDS	225	545	.	+	0	ID=cds-WP_302479659.1;Parent=gene-MSCD_RS03015;Dbxref=GenBank:WP_302479659.1;Name=WP_302479659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.7;locus_tag=MSCD_RS03015;product=DUF2326 domain-containing protein;protein_id=WP_302479659.1;transl_table=4
NZ_LAUX01000087.1	RefSeq	gene	585	1400	.	-	.	ID=gene-MSCD_RS03020;Name=MSCD_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03020;old_locus_tag=MSCd_5260
NZ_LAUX01000087.1	Protein Homology	CDS	585	1400	.	-	0	ID=cds-WP_045596676.1;Parent=gene-MSCD_RS03020;Dbxref=GenBank:WP_045596676.1;Name=WP_045596676.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863037.1;locus_tag=MSCD_RS03020;product=MurR/RpiR family transcriptional regulator;protein_id=WP_045596676.1;transl_table=4
NZ_LAUX01000087.1	RefSeq	gene	1587	3518	.	+	.	ID=gene-MSCD_RS03025;Name=MSCD_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03025;old_locus_tag=MSCd_5270
NZ_LAUX01000087.1	Protein Homology	CDS	1587	3518	.	+	0	ID=cds-WP_011167080.1;Parent=gene-MSCD_RS03025;Dbxref=GenBank:WP_011167080.1;Name=WP_011167080.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584532.1;locus_tag=MSCD_RS03025;product=type IA DNA topoisomerase;protein_id=WP_011167080.1;transl_table=4
##sequence-region NZ_LAUX01000088.1 1 3552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000088.1	RefSeq	region	1	3552	.	+	.	ID=NZ_LAUX01000088.1:1..3552;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000088.1	RefSeq	gene	44	265	.	-	.	ID=gene-MSCD_RS05385;Name=MSCD_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05385
NZ_LAUX01000088.1	GeneMarkS-2+	CDS	44	265	.	-	0	ID=cds-WP_015545264.1;Parent=gene-MSCD_RS05385;Dbxref=GenBank:WP_015545264.1;Name=WP_015545264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05385;product=hypothetical protein;protein_id=WP_015545264.1;transl_table=4
NZ_LAUX01000088.1	RefSeq	gene	374	508	.	-	.	ID=gene-MSCD_RS05390;Name=MSCD_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05390
NZ_LAUX01000088.1	GeneMarkS-2+	CDS	374	508	.	-	0	ID=cds-WP_011167078.1;Parent=gene-MSCD_RS05390;Dbxref=GenBank:WP_011167078.1;Name=WP_011167078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05390;product=hypothetical protein;protein_id=WP_011167078.1;transl_table=4
NZ_LAUX01000088.1	RefSeq	gene	1025	1399	.	-	.	ID=gene-MSCD_RS05395;Name=MSCD_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05395;old_locus_tag=MSCd_5290
NZ_LAUX01000088.1	Protein Homology	CDS	1025	1399	.	-	0	ID=cds-WP_011167077.1;Parent=gene-MSCD_RS05395;Dbxref=GenBank:WP_011167077.1;Name=WP_011167077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167077.1;locus_tag=MSCD_RS05395;product=hypothetical protein;protein_id=WP_011167077.1;transl_table=4
NZ_LAUX01000088.1	RefSeq	gene	1377	2081	.	-	.	ID=gene-MSCD_RS03050;Name=MSCD_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03050;old_locus_tag=MSCd_5300
NZ_LAUX01000088.1	Protein Homology	CDS	1377	2081	.	-	0	ID=cds-WP_015545600.1;Parent=gene-MSCD_RS03050;Dbxref=GenBank:WP_015545600.1;Name=WP_015545600.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448073.1;locus_tag=MSCD_RS03050;product=ABC transporter ATP-binding protein;protein_id=WP_015545600.1;transl_table=4
NZ_LAUX01000088.1	RefSeq	gene	2083	2568	.	-	.	ID=gene-MSCD_RS05010;Name=MSCD_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05010;old_locus_tag=MSCd_5310
NZ_LAUX01000088.1	Protein Homology	CDS	2083	2568	.	-	0	ID=cds-WP_015545256.1;Parent=gene-MSCD_RS05010;Dbxref=GenBank:WP_015545256.1;Name=WP_015545256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545256.1;locus_tag=MSCD_RS05010;product=hypothetical protein;protein_id=WP_015545256.1;transl_table=4
NZ_LAUX01000088.1	RefSeq	gene	2662	3549	.	-	.	ID=gene-MSCD_RS03060;Name=MSCD_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03060
NZ_LAUX01000088.1	Protein Homology	CDS	2662	3549	.	-	0	ID=cds-WP_015545581.1;Parent=gene-MSCD_RS03060;Dbxref=GenBank:WP_015545581.1;Name=WP_015545581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863045.1;locus_tag=MSCD_RS03060;product=aromatic motif membrane protein;protein_id=WP_015545581.1;transl_table=4
##sequence-region NZ_LAUX01000001.1 1 2202
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000001.1	RefSeq	region	1	2202	.	+	.	ID=NZ_LAUX01000001.1:1..2202;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000001.1	RefSeq	gene	1	827	.	-	.	ID=gene-MSCD_RS00005;Name=MSCD_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00005;old_locus_tag=MSCd_0010;partial=true;start_range=.,1
NZ_LAUX01000001.1	Protein Homology	CDS	1	827	.	-	0	ID=cds-WP_107682057.1;Parent=gene-MSCD_RS00005;Dbxref=GenBank:WP_107682057.1;Name=WP_107682057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863046.1;locus_tag=MSCD_RS00005;partial=true;product=aromatic motif membrane protein;protein_id=WP_107682057.1;start_range=.,1;transl_table=4
NZ_LAUX01000001.1	RefSeq	gene	814	2016	.	-	.	ID=gene-MSCD_RS00010;Name=MSCD_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00010;old_locus_tag=MSCd_0020
NZ_LAUX01000001.1	Protein Homology	CDS	814	2016	.	-	0	ID=cds-WP_011167072.1;Parent=gene-MSCD_RS00010;Dbxref=GenBank:WP_011167072.1;Name=WP_011167072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729968.1;locus_tag=MSCD_RS00010;product=aromatic motif membrane protein;protein_id=WP_011167072.1;transl_table=4
##sequence-region NZ_LAUX01000089.1 1 1795
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000089.1	RefSeq	region	1	1795	.	+	.	ID=NZ_LAUX01000089.1:1..1795;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000089.1	RefSeq	pseudogene	1	1782	.	-	.	ID=gene-MSCD_RS03070;Name=MSCD_RS03070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03070;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000089.1	Protein Homology	CDS	1	1782	.	-	0	ID=cds-MSCD_RS03070;Parent=gene-MSCD_RS03070;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387634.1;locus_tag=MSCD_RS03070;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000090.1 1 12911
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000090.1	RefSeq	region	1	12911	.	+	.	ID=NZ_LAUX01000090.1:1..12911;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000090.1	RefSeq	gene	1	1495	.	-	.	ID=gene-MSCD_RS03075;Name=MSCD_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03075;partial=true;start_range=.,1
NZ_LAUX01000090.1	Protein Homology	CDS	1	1495	.	-	0	ID=cds-WP_107682103.1;Parent=gene-MSCD_RS03075;Dbxref=GenBank:WP_107682103.1;Name=WP_107682103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167067.1;locus_tag=MSCD_RS03075;partial=true;product=YfcC family protein;protein_id=WP_107682103.1;start_range=.,1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	1564	2271	.	-	.	ID=gene-MSCD_RS03080;Name=MSCD_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03080;old_locus_tag=MSCd_5320
NZ_LAUX01000090.1	Protein Homology	CDS	1564	2271	.	-	0	ID=cds-WP_039275787.1;Parent=gene-MSCD_RS03080;Dbxref=GenBank:WP_039275787.1;Name=WP_039275787.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863050.1;locus_tag=MSCD_RS03080;product=YgjP family zinc-dependent metalloprotease;protein_id=WP_039275787.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	2243	3337	.	-	.	ID=gene-MSCD_RS03085;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=MSCD_RS03085;old_locus_tag=MSCd_5330
NZ_LAUX01000090.1	Protein Homology	CDS	2243	3337	.	-	0	ID=cds-WP_011167065.1;Parent=gene-MSCD_RS03085;Dbxref=GenBank:WP_011167065.1;Name=WP_011167065.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698114.1;locus_tag=MSCD_RS03085;product=redox-regulated ATPase YchF;protein_id=WP_011167065.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	3373	3573	.	-	.	ID=gene-MSCD_RS03090;Name=MSCD_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03090;old_locus_tag=MSCd_5340
NZ_LAUX01000090.1	Protein Homology	CDS	3373	3573	.	-	0	ID=cds-WP_011167064.1;Parent=gene-MSCD_RS03090;Dbxref=GenBank:WP_011167064.1;Name=WP_011167064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863051.1;locus_tag=MSCD_RS03090;product=DUF951 domain-containing protein;protein_id=WP_011167064.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	3575	3808	.	-	.	ID=gene-MSCD_RS03095;Name=MSCD_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03095;old_locus_tag=MSCd_5350
NZ_LAUX01000090.1	Protein Homology	CDS	3575	3808	.	-	0	ID=cds-WP_250635716.1;Parent=gene-MSCD_RS03095;Dbxref=GenBank:WP_250635716.1;Name=WP_250635716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014575.7;locus_tag=MSCD_RS03095;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_250635716.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	3856	4269	.	-	.	ID=gene-MSCD_RS03100;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=MSCD_RS03100;old_locus_tag=MSCd_5360
NZ_LAUX01000090.1	Protein Homology	CDS	3856	4269	.	-	0	ID=cds-WP_011167063.1;Parent=gene-MSCD_RS03100;Dbxref=GenBank:WP_011167063.1;Name=WP_011167063.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167063.1;locus_tag=MSCD_RS03100;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_011167063.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	4269	4865	.	-	.	ID=gene-MSCD_RS03105;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=MSCD_RS03105;old_locus_tag=MSCd_5370
NZ_LAUX01000090.1	Protein Homology	CDS	4269	4865	.	-	0	ID=cds-WP_015545630.1;Parent=gene-MSCD_RS03105;Dbxref=GenBank:WP_015545630.1;Name=WP_015545630.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698116.1;locus_tag=MSCD_RS03105;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_015545630.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	pseudogene	4969	6550	.	-	.	ID=gene-MSCD_RS03110;Name=MSCD_RS03110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03110;old_locus_tag=MSCd_5380;pseudo=true
NZ_LAUX01000090.1	Protein Homology	CDS	4969	6550	.	-	0	ID=cds-MSCD_RS03110;Parent=gene-MSCD_RS03110;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545437.1;locus_tag=MSCD_RS03110;product=APC family permease;pseudo=true;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	6696	7376	.	-	.	ID=gene-MSCD_RS03115;Name=MSCD_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03115;old_locus_tag=MSCd_5390
NZ_LAUX01000090.1	Protein Homology	CDS	6696	7376	.	-	0	ID=cds-WP_015545684.1;Parent=gene-MSCD_RS03115;Dbxref=GenBank:WP_015545684.1;Name=WP_015545684.1;Ontology_term=GO:0034220,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167060.1;locus_tag=MSCD_RS03115;product=ECF transporter S component;protein_id=WP_015545684.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	7348	8886	.	-	.	ID=gene-MSCD_RS03120;Name=MSCD_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03120;old_locus_tag=MSCd_5400
NZ_LAUX01000090.1	Protein Homology	CDS	7348	8886	.	-	0	ID=cds-WP_011167059.1;Parent=gene-MSCD_RS03120;Dbxref=GenBank:WP_011167059.1;Name=WP_011167059.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863055.1;locus_tag=MSCD_RS03120;product=APC family permease;protein_id=WP_011167059.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	8945	11602	.	-	.	ID=gene-MSCD_RS03125;Name=MSCD_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03125;old_locus_tag=MSCd_5410
NZ_LAUX01000090.1	Protein Homology	CDS	8945	11602	.	-	0	ID=cds-WP_015545297.1;Parent=gene-MSCD_RS03125;Dbxref=GenBank:WP_015545297.1;Name=WP_015545297.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729978.1;locus_tag=MSCD_RS03125;product=HAD-IC family P-type ATPase;protein_id=WP_015545297.1;transl_table=4
NZ_LAUX01000090.1	RefSeq	gene	11595	12608	.	-	.	ID=gene-MSCD_RS05820;Name=MSCD_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05820;old_locus_tag=MSCd_5420
NZ_LAUX01000090.1	Protein Homology	CDS	11595	12608	.	-	0	ID=cds-WP_011167057.1;Parent=gene-MSCD_RS05820;Dbxref=GenBank:WP_011167057.1;Name=WP_011167057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167057.1;locus_tag=MSCD_RS05820;product=DNA-binding protein;protein_id=WP_011167057.1;transl_table=4
##sequence-region NZ_LAUX01000091.1 1 2488
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000091.1	RefSeq	region	1	2488	.	+	.	ID=NZ_LAUX01000091.1:1..2488;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000091.1	RefSeq	gene	1	626	.	+	.	ID=gene-MSCD_RS03135;Name=MSCD_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03135;partial=true;start_range=.,1
NZ_LAUX01000091.1	Protein Homology	CDS	1	626	.	+	2	ID=cds-WP_107682105.1;Parent=gene-MSCD_RS03135;Dbxref=GenBank:WP_107682105.1;Name=WP_107682105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166824.1;locus_tag=MSCD_RS03135;partial=true;product=hypothetical protein;protein_id=WP_107682105.1;start_range=.,1;transl_table=4
NZ_LAUX01000091.1	RefSeq	gene	1044	2258	.	+	.	ID=gene-MSCD_RS03140;Name=MSCD_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03140;old_locus_tag=MSCd_5440
NZ_LAUX01000091.1	Protein Homology	CDS	1044	2258	.	+	0	ID=cds-WP_230592200.1;Parent=gene-MSCD_RS03140;Dbxref=GenBank:WP_230592200.1;Name=WP_230592200.1;Ontology_term=GO:0032508,GO:0003677,GO:0003678,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;go_process=obsolete DNA duplex unwinding|0032508||IEA;inference=COORDINATES: protein motif:HMM:NF024754.7;locus_tag=MSCD_RS03140;product=ATP-dependent DNA helicase;protein_id=WP_230592200.1;transl_table=4
##sequence-region NZ_LAUX01000092.1 1 2761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000092.1	RefSeq	region	1	2761	.	+	.	ID=NZ_LAUX01000092.1:1..2761;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000092.1	RefSeq	gene	1	552	.	+	.	ID=gene-MSCD_RS03145;Name=MSCD_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03145;partial=true;start_range=.,1
NZ_LAUX01000092.1	Protein Homology	CDS	1	552	.	+	0	ID=cds-WP_334198879.1;Parent=gene-MSCD_RS03145;Dbxref=GenBank:WP_334198879.1;Name=WP_334198879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447896.1;locus_tag=MSCD_RS03145;partial=true;product=ABC-three component system protein;protein_id=WP_334198879.1;start_range=.,1;transl_table=4
NZ_LAUX01000092.1	RefSeq	gene	555	782	.	+	.	ID=gene-MSCD_RS03150;Name=MSCD_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03150
NZ_LAUX01000092.1	Protein Homology	CDS	555	782	.	+	0	ID=cds-WP_011166816.1;Parent=gene-MSCD_RS03150;Dbxref=GenBank:WP_011166816.1;Name=WP_011166816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447895.1;locus_tag=MSCD_RS03150;product=ABC-three component system middle component 6;protein_id=WP_011166816.1;transl_table=4
NZ_LAUX01000092.1	RefSeq	gene	773	1102	.	+	.	ID=gene-MSCD_RS05410;Name=MSCD_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05410;old_locus_tag=MSCd_5450
NZ_LAUX01000092.1	GeneMarkS-2+	CDS	773	1102	.	+	0	ID=cds-WP_011166815.1;Parent=gene-MSCD_RS05410;Dbxref=GenBank:WP_011166815.1;Name=WP_011166815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05410;product=hypothetical protein;protein_id=WP_011166815.1;transl_table=4
NZ_LAUX01000092.1	RefSeq	gene	1240	1737	.	+	.	ID=gene-MSCD_RS05415;Name=MSCD_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05415;old_locus_tag=MSCd_5460
NZ_LAUX01000092.1	GeneMarkS-2+	CDS	1240	1737	.	+	0	ID=cds-WP_011166814.1;Parent=gene-MSCD_RS05415;Dbxref=GenBank:WP_011166814.1;Name=WP_011166814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05415;product=hypothetical protein;protein_id=WP_011166814.1;transl_table=4
NZ_LAUX01000092.1	RefSeq	gene	1755	2171	.	+	.	ID=gene-MSCD_RS05420;Name=MSCD_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05420;old_locus_tag=MSCd_5470
NZ_LAUX01000092.1	GeneMarkS-2+	CDS	1755	2171	.	+	0	ID=cds-WP_230592180.1;Parent=gene-MSCD_RS05420;Dbxref=GenBank:WP_230592180.1;Name=WP_230592180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05420;product=hypothetical protein;protein_id=WP_230592180.1;transl_table=4
NZ_LAUX01000092.1	RefSeq	gene	2191	2484	.	+	.	ID=gene-MSCD_RS05425;Name=MSCD_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05425
NZ_LAUX01000092.1	Protein Homology	CDS	2191	2484	.	+	0	ID=cds-WP_230592199.1;Parent=gene-MSCD_RS05425;Dbxref=GenBank:WP_230592199.1;Name=WP_230592199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.7;locus_tag=MSCD_RS05425;product=DUF2326 domain-containing protein;protein_id=WP_230592199.1;transl_table=4
NZ_LAUX01000092.1	RefSeq	gene	2639	2761	.	+	.	ID=gene-MSCD_RS03160;Name=MSCD_RS03160;end_range=2761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03160;partial=true
NZ_LAUX01000092.1	Protein Homology	CDS	2639	2761	.	+	0	ID=cds-WP_181256862.1;Parent=gene-MSCD_RS03160;Dbxref=GenBank:WP_181256862.1;Name=WP_181256862.1;end_range=2761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729710.1;locus_tag=MSCD_RS03160;partial=true;product=MspA/MspB/MIB-like signal-anchor domain-contatining protein;protein_id=WP_181256862.1;transl_table=4
##sequence-region NZ_LAUX01000131.1 1 1438
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000131.1	RefSeq	region	1	1438	.	+	.	ID=NZ_LAUX01000131.1:1..1438;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000131.1	RefSeq	gene	86	175	.	-	.	ID=gene-MSCD_RS04465;Name=MSCD_RS04465;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04465;old_locus_tag=MSCd_7810
NZ_LAUX01000131.1	tRNAscan-SE	tRNA	86	175	.	-	.	ID=rna-MSCD_RS04465;Parent=gene-MSCD_RS04465;anticodon=(pos:complement(139..141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04465;product=tRNA-Ser
NZ_LAUX01000131.1	tRNAscan-SE	exon	86	175	.	-	.	ID=exon-MSCD_RS04465-1;Parent=rna-MSCD_RS04465;anticodon=(pos:complement(139..141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04465;product=tRNA-Ser
NZ_LAUX01000131.1	RefSeq	gene	340	498	.	-	.	ID=gene-MSCD_RS05560;Name=MSCD_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05560
NZ_LAUX01000131.1	GeneMarkS-2+	CDS	340	498	.	-	0	ID=cds-WP_230592174.1;Parent=gene-MSCD_RS05560;Dbxref=GenBank:WP_230592174.1;Name=WP_230592174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05560;product=hypothetical protein;protein_id=WP_230592174.1;transl_table=4
NZ_LAUX01000131.1	RefSeq	pseudogene	723	1370	.	-	.	ID=gene-MSCD_RS05700;Name=MSCD_RS05700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05700;pseudo=true
NZ_LAUX01000131.1	Protein Homology	CDS	723	1370	.	-	0	ID=cds-MSCD_RS05700;Parent=gene-MSCD_RS05700;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448037.1;locus_tag=MSCD_RS05700;product=deoxynucleoside kinase;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000093.1 1 4164
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000093.1	RefSeq	region	1	4164	.	+	.	ID=NZ_LAUX01000093.1:1..4164;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000093.1	RefSeq	gene	56	466	.	-	.	ID=gene-MSCD_RS03165;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=MSCD_RS03165;old_locus_tag=MSCd_5480
NZ_LAUX01000093.1	cmsearch	tmRNA	56	466	.	-	.	ID=rna-MSCD_RS03165;Parent=gene-MSCD_RS03165;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03165;product=transfer-messenger RNA
NZ_LAUX01000093.1	cmsearch	exon	56	466	.	-	.	ID=exon-MSCD_RS03165-1;Parent=rna-MSCD_RS03165;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03165;product=transfer-messenger RNA
NZ_LAUX01000093.1	RefSeq	pseudogene	611	2013	.	+	.	ID=gene-MSCD_RS03170;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=pseudogene;locus_tag=MSCD_RS03170;old_locus_tag=MSCd_5500;pseudo=true
NZ_LAUX01000093.1	Protein Homology	CDS	611	2013	.	+	0	ID=cds-MSCD_RS03170;Parent=gene-MSCD_RS03170;Note=frameshifted;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729301.1;locus_tag=MSCD_RS03170;product=magnesium transporter;pseudo=true;transl_table=4
NZ_LAUX01000093.1	RefSeq	gene	2015	2680	.	+	.	ID=gene-MSCD_RS03175;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=MSCD_RS03175;old_locus_tag=MSCd_5510
NZ_LAUX01000093.1	Protein Homology	CDS	2015	2680	.	+	0	ID=cds-WP_011166368.1;Parent=gene-MSCD_RS03175;Dbxref=GenBank:WP_011166368.1;Name=WP_011166368.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698026.1;locus_tag=MSCD_RS03175;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_011166368.1;transl_table=4
NZ_LAUX01000093.1	RefSeq	gene	2743	3360	.	-	.	ID=gene-MSCD_RS03180;Name=MSCD_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03180;old_locus_tag=MSCd_5520
NZ_LAUX01000093.1	Protein Homology	CDS	2743	3360	.	-	0	ID=cds-WP_011166367.1;Parent=gene-MSCD_RS03180;Dbxref=GenBank:WP_011166367.1;Name=WP_011166367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166367.1;locus_tag=MSCD_RS03180;product=hypothetical protein;protein_id=WP_011166367.1;transl_table=4
##sequence-region NZ_LAUX01000094.1 1 2436
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000094.1	RefSeq	region	1	2436	.	+	.	ID=NZ_LAUX01000094.1:1..2436;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000094.1	RefSeq	pseudogene	130	515	.	+	.	ID=gene-MSCD_RS03190;Name=MSCD_RS03190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03190;old_locus_tag=MSCd_5540;pseudo=true
NZ_LAUX01000094.1	Protein Homology	CDS	130	515	.	+	0	ID=cds-MSCD_RS03190;Parent=gene-MSCD_RS03190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387365.1;locus_tag=MSCD_RS03190;product=MAG6450 family protein;pseudo=true;transl_table=4
NZ_LAUX01000094.1	RefSeq	gene	831	2436	.	+	.	ID=gene-MSCD_RS03195;Name=MSCD_RS03195;end_range=2436,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03195;partial=true
NZ_LAUX01000094.1	Protein Homology	CDS	831	2436	.	+	0	ID=cds-WP_146149237.1;Parent=gene-MSCD_RS03195;Dbxref=GenBank:WP_146149237.1;Name=WP_146149237.1;Ontology_term=GO:0051276,GO:0005515,GO:0005524,GO:0005694;end_range=2436,.;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447799.1;locus_tag=MSCD_RS03195;partial=true;product=SMC hinge domain-related protein;protein_id=WP_146149237.1;transl_table=4
##sequence-region NZ_LAUX01000095.1 1 1823
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000095.1	RefSeq	region	1	1823	.	+	.	ID=NZ_LAUX01000095.1:1..1823;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000095.1	RefSeq	gene	168	1055	.	+	.	ID=gene-MSCD_RS03200;Name=MSCD_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03200;old_locus_tag=MSCd_5550
NZ_LAUX01000095.1	Protein Homology	CDS	168	1055	.	+	0	ID=cds-WP_011166874.1;Parent=gene-MSCD_RS03200;Dbxref=GenBank:WP_011166874.1;Name=WP_011166874.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447938.1;locus_tag=MSCD_RS03200;product=ABC transporter ATP-binding protein;protein_id=WP_011166874.1;transl_table=4
NZ_LAUX01000095.1	RefSeq	gene	1057	1539	.	+	.	ID=gene-MSCD_RS03205;Name=MSCD_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03205;old_locus_tag=MSCd_5560
NZ_LAUX01000095.1	Protein Homology	CDS	1057	1539	.	+	0	ID=cds-WP_011166875.1;Parent=gene-MSCD_RS03205;Dbxref=GenBank:WP_011166875.1;Name=WP_011166875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166875.1;locus_tag=MSCD_RS03205;product=hypothetical protein;protein_id=WP_011166875.1;transl_table=4
NZ_LAUX01000095.1	RefSeq	gene	1532	1819	.	+	.	ID=gene-MSCD_RS03210;Name=MSCD_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03210;old_locus_tag=MSCd_5570
NZ_LAUX01000095.1	Protein Homology	CDS	1532	1819	.	+	0	ID=cds-WP_011166876.1;Parent=gene-MSCD_RS03210;Dbxref=GenBank:WP_011166876.1;Name=WP_011166876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166876.1;locus_tag=MSCD_RS03210;product=hypothetical protein;protein_id=WP_011166876.1;transl_table=4
##sequence-region NZ_LAUX01000096.1 1 2738
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000096.1	RefSeq	region	1	2738	.	+	.	ID=NZ_LAUX01000096.1:1..2738;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000096.1	RefSeq	gene	90	166	.	-	.	ID=gene-MSCD_RS03215;Name=MSCD_RS03215;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS03215;old_locus_tag=MSCd_5580
NZ_LAUX01000096.1	tRNAscan-SE	tRNA	90	166	.	-	.	ID=rna-MSCD_RS03215;Parent=gene-MSCD_RS03215;anticodon=(pos:complement(130..132));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS03215;product=tRNA-Ile
NZ_LAUX01000096.1	tRNAscan-SE	exon	90	166	.	-	.	ID=exon-MSCD_RS03215-1;Parent=rna-MSCD_RS03215;anticodon=(pos:complement(130..132));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS03215;product=tRNA-Ile
NZ_LAUX01000096.1	RefSeq	gene	239	2738	.	-	.	ID=gene-MSCD_RS03220;Name=MSCD_RS03220;end_range=2738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03220;partial=true
NZ_LAUX01000096.1	Protein Homology	CDS	239	2738	.	-	1	ID=cds-WP_107682106.1;Parent=gene-MSCD_RS03220;Dbxref=GenBank:WP_107682106.1;Name=WP_107682106.1;Ontology_term=GO:0009897;end_range=2738,.;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584493.1;locus_tag=MSCD_RS03220;partial=true;product=MOLPALP family lipoprotein;protein_id=WP_107682106.1;transl_table=4
##sequence-region NZ_LAUX01000097.1 1 3162
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000097.1	RefSeq	region	1	3162	.	+	.	ID=NZ_LAUX01000097.1:1..3162;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000097.1	RefSeq	pseudogene	1	276	.	-	.	ID=gene-MSCD_RS03225;Name=MSCD_RS03225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03225;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000097.1	Protein Homology	CDS	1	276	.	-	0	ID=cds-MSCD_RS03225;Parent=gene-MSCD_RS03225;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862878.1;locus_tag=MSCD_RS03225;partial=true;product=DnaD domain protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000097.1	RefSeq	gene	433	1257	.	-	.	ID=gene-MSCD_RS03230;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=MSCD_RS03230;old_locus_tag=MSCd_5590
NZ_LAUX01000097.1	Protein Homology	CDS	433	1257	.	-	0	ID=cds-WP_011166853.1;Parent=gene-MSCD_RS03230;Dbxref=GenBank:WP_011166853.1;Name=WP_011166853.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862879.1;locus_tag=MSCD_RS03230;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_011166853.1;transl_table=4
NZ_LAUX01000097.1	RefSeq	gene	1268	3162	.	-	.	ID=gene-MSCD_RS03235;Name=MSCD_RS03235;end_range=3162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03235;partial=true
NZ_LAUX01000097.1	Protein Homology	CDS	1268	3162	.	-	2	ID=cds-WP_107682107.1;Parent=gene-MSCD_RS03235;Dbxref=GenBank:WP_107682107.1;Name=WP_107682107.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;end_range=3162,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698357.1;locus_tag=MSCD_RS03235;partial=true;product=DNA polymerase;protein_id=WP_107682107.1;transl_table=4
##sequence-region NZ_LAUX01000132.1 1 836
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000132.1	RefSeq	region	1	836	.	+	.	ID=NZ_LAUX01000132.1:1..836;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000132.1	RefSeq	pseudogene	631	836	.	-	.	ID=gene-MSCD_RS05705;Name=MSCD_RS05705;end_range=836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05705;partial=true;pseudo=true
NZ_LAUX01000132.1	Protein Homology	CDS	631	836	.	-	0	ID=cds-MSCD_RS05705;Parent=gene-MSCD_RS05705;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954660.1;locus_tag=MSCD_RS05705;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000133.1 1 1371
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000133.1	RefSeq	region	1	1371	.	+	.	ID=NZ_LAUX01000133.1:1..1371;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000133.1	RefSeq	gene	91	399	.	-	.	ID=gene-MSCD_RS04490;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=MSCD_RS04490;old_locus_tag=MSCd_7850
NZ_LAUX01000133.1	Protein Homology	CDS	91	399	.	-	0	ID=cds-WP_011166282.1;Parent=gene-MSCD_RS04490;Dbxref=GenBank:WP_011166282.1;Name=WP_011166282.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862470.1;locus_tag=MSCD_RS04490;product=thioredoxin;protein_id=WP_011166282.1;transl_table=4
NZ_LAUX01000133.1	RefSeq	gene	410	1252	.	-	.	ID=gene-MSCD_RS04495;Name=MSCD_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04495;old_locus_tag=MSCd_7860
NZ_LAUX01000133.1	Protein Homology	CDS	410	1252	.	-	0	ID=cds-WP_011166283.1;Parent=gene-MSCD_RS04495;Dbxref=GenBank:WP_011166283.1;Name=WP_011166283.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698203.1;locus_tag=MSCD_RS04495;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011166283.1;transl_table=4
##sequence-region NZ_LAUX01000098.1 1 6996
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000098.1	RefSeq	region	1	6996	.	+	.	ID=NZ_LAUX01000098.1:1..6996;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000098.1	RefSeq	gene	1	999	.	-	.	ID=gene-MSCD_RS03240;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=MSCD_RS03240;partial=true;start_range=.,1
NZ_LAUX01000098.1	Protein Homology	CDS	1	999	.	-	0	ID=cds-WP_146147728.1;Parent=gene-MSCD_RS03240;Dbxref=GenBank:WP_146147728.1;Name=WP_146147728.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862522.1;locus_tag=MSCD_RS03240;partial=true;product=CTP synthase;protein_id=WP_146147728.1;start_range=.,1;transl_table=4
NZ_LAUX01000098.1	RefSeq	gene	1090	1518	.	-	.	ID=gene-MSCD_RS03245;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=MSCD_RS03245;old_locus_tag=MSCd_5600
NZ_LAUX01000098.1	Protein Homology	CDS	1090	1518	.	-	0	ID=cds-WP_011166337.1;Parent=gene-MSCD_RS03245;Dbxref=GenBank:WP_011166337.1;Name=WP_011166337.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729276.1;locus_tag=MSCD_RS03245;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_011166337.1;transl_table=4
NZ_LAUX01000098.1	RefSeq	pseudogene	1544	2757	.	-	.	ID=gene-MSCD_RS05675;Name=MSCD_RS05675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05675;pseudo=true
NZ_LAUX01000098.1	Protein Homology	CDS	1544	2757	.	-	0	ID=cds-MSCD_RS05675;Parent=gene-MSCD_RS05675;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862521.1;locus_tag=MSCD_RS05675;product=HD domain-containing protein;pseudo=true;transl_table=4
NZ_LAUX01000098.1	RefSeq	gene	2760	4211	.	-	.	ID=gene-MSCD_RS03255;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=MSCD_RS03255;old_locus_tag=MSCd_5630
NZ_LAUX01000098.1	Protein Homology	CDS	2760	4211	.	-	0	ID=cds-WP_011166335.1;Parent=gene-MSCD_RS03255;Dbxref=GenBank:WP_011166335.1;Name=WP_011166335.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862520.1;locus_tag=MSCD_RS03255;product=glutamate--tRNA ligase;protein_id=WP_011166335.1;transl_table=4
NZ_LAUX01000098.1	RefSeq	gene	4342	6015	.	-	.	ID=gene-MSCD_RS03260;Name=MSCD_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03260;old_locus_tag=MSCd_5640
NZ_LAUX01000098.1	Protein Homology	CDS	4342	6015	.	-	0	ID=cds-WP_107682108.1;Parent=gene-MSCD_RS03260;Dbxref=GenBank:WP_107682108.1;Name=WP_107682108.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862519.1;locus_tag=MSCD_RS03260;product=PTS transporter subunit EIIC;protein_id=WP_107682108.1;transl_table=4
NZ_LAUX01000098.1	RefSeq	gene	6019	6795	.	-	.	ID=gene-MSCD_RS03265;Name=MSCD_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03265;old_locus_tag=MSCd_5650
NZ_LAUX01000098.1	Protein Homology	CDS	6019	6795	.	-	0	ID=cds-WP_011166333.1;Parent=gene-MSCD_RS03265;Dbxref=GenBank:WP_011166333.1;Name=WP_011166333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166333.1;locus_tag=MSCD_RS03265;product=glucosamine-6-phosphate deaminase;protein_id=WP_011166333.1;transl_table=4
##sequence-region NZ_LAUX01000099.1 1 4209
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000099.1	RefSeq	region	1	4209	.	+	.	ID=NZ_LAUX01000099.1:1..4209;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000099.1	RefSeq	pseudogene	48	1374	.	-	.	ID=gene-MSCD_RS05680;Name=MSCD_RS05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05680;pseudo=true
NZ_LAUX01000099.1	Protein Homology	CDS	48	1374	.	-	0	ID=cds-MSCD_RS05680;Parent=gene-MSCD_RS05680;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954660.1;locus_tag=MSCD_RS05680;product=transposase;pseudo=true;transl_table=4
NZ_LAUX01000099.1	RefSeq	gene	1506	2921	.	-	.	ID=gene-MSCD_RS03280;Name=MSCD_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03280;old_locus_tag=MSCd_5680
NZ_LAUX01000099.1	Protein Homology	CDS	1506	2921	.	-	0	ID=cds-WP_011166327.1;Parent=gene-MSCD_RS03280;Dbxref=GenBank:WP_011166327.1;Name=WP_011166327.1;Ontology_term=GO:0055085,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698050.1;locus_tag=MSCD_RS03280;product=hexose phosphate transporter;protein_id=WP_011166327.1;transl_table=4
NZ_LAUX01000099.1	RefSeq	gene	3238	3954	.	-	.	ID=gene-MSCD_RS03285;Name=MSCD_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03285;old_locus_tag=MSCd_5690
NZ_LAUX01000099.1	Protein Homology	CDS	3238	3954	.	-	0	ID=cds-WP_011166326.1;Parent=gene-MSCD_RS03285;Dbxref=GenBank:WP_011166326.1;Name=WP_011166326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166326.1;locus_tag=MSCD_RS03285;product=Vmc-like lipoprotein signal peptide domain-containing protein;protein_id=WP_011166326.1;transl_table=4
##sequence-region NZ_LAUX01000100.1 1 8899
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000100.1	RefSeq	region	1	8899	.	+	.	ID=NZ_LAUX01000100.1:1..8899;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000100.1	RefSeq	gene	18	878	.	-	.	ID=gene-MSCD_RS03290;Name=MSCD_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03290;old_locus_tag=MSCd_5700
NZ_LAUX01000100.1	Protein Homology	CDS	18	878	.	-	0	ID=cds-WP_011166325.1;Parent=gene-MSCD_RS03290;Dbxref=GenBank:WP_011166325.1;Name=WP_011166325.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862516.1;locus_tag=MSCD_RS03290;product=alpha/beta hydrolase;protein_id=WP_011166325.1;transl_table=4
NZ_LAUX01000100.1	RefSeq	pseudogene	890	2471	.	-	.	ID=gene-MSCD_RS03295;Name=MSCD_RS03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03295;old_locus_tag=MSCd_5710;pseudo=true
NZ_LAUX01000100.1	Protein Homology	CDS	890	2471	.	-	0	ID=cds-MSCD_RS03295;Parent=gene-MSCD_RS03295;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862515.1;locus_tag=MSCD_RS03295;product=MFS transporter;pseudo=true;transl_table=4
NZ_LAUX01000100.1	RefSeq	gene	2689	3915	.	-	.	ID=gene-MSCD_RS03300;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=MSCD_RS03300;old_locus_tag=MSCd_5730
NZ_LAUX01000100.1	Protein Homology	CDS	2689	3915	.	-	0	ID=cds-WP_107682109.1;Parent=gene-MSCD_RS03300;Dbxref=GenBank:WP_107682109.1;Name=WP_107682109.1;Ontology_term=GO:0006567,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729268.1;locus_tag=MSCD_RS03300;product=threonine ammonia-lyase;protein_id=WP_107682109.1;transl_table=4
NZ_LAUX01000100.1	RefSeq	pseudogene	4101	4899	.	+	.	ID=gene-MSCD_RS03305;Name=MSCD_RS03305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03305;pseudo=true
NZ_LAUX01000100.1	Protein Homology	CDS	4101	4899	.	+	0	ID=cds-MSCD_RS03305;Parent=gene-MSCD_RS03305;Note=frameshifted;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387021.1;locus_tag=MSCD_RS03305;product=TatD family hydrolase;pseudo=true;transl_table=4
NZ_LAUX01000100.1	RefSeq	gene	4928	6466	.	-	.	ID=gene-MSCD_RS03310;Name=MSCD_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03310;old_locus_tag=MSCd_5750
NZ_LAUX01000100.1	Protein Homology	CDS	4928	6466	.	-	0	ID=cds-WP_011166322.1;Parent=gene-MSCD_RS03310;Dbxref=GenBank:WP_011166322.1;Name=WP_011166322.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862513.1;locus_tag=MSCD_RS03310;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_011166322.1;transl_table=4
NZ_LAUX01000100.1	RefSeq	gene	6530	7306	.	-	.	ID=gene-MSCD_RS03315;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=MSCD_RS03315;old_locus_tag=MSCd_5760
NZ_LAUX01000100.1	Protein Homology	CDS	6530	7306	.	-	0	ID=cds-WP_011166321.1;Parent=gene-MSCD_RS03315;Dbxref=GenBank:WP_011166321.1;Name=WP_011166321.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166321.1;locus_tag=MSCD_RS03315;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_011166321.1;transl_table=4
NZ_LAUX01000100.1	RefSeq	pseudogene	7360	7799	.	+	.	ID=gene-MSCD_RS05685;Name=MSCD_RS05685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05685;pseudo=true
NZ_LAUX01000100.1	Protein Homology	CDS	7360	7799	.	+	0	ID=cds-MSCD_RS05685;Parent=gene-MSCD_RS05685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729264.1;locus_tag=MSCD_RS05685;product=hypothetical protein;pseudo=true;transl_table=4
NZ_LAUX01000100.1	RefSeq	gene	8008	8880	.	+	.	ID=gene-MSCD_RS03330;Name=MSCD_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03330;old_locus_tag=MSCd_5790
NZ_LAUX01000100.1	Protein Homology	CDS	8008	8880	.	+	0	ID=cds-WP_015545394.1;Parent=gene-MSCD_RS03330;Dbxref=GenBank:WP_015545394.1;Name=WP_015545394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167136.1;locus_tag=MSCD_RS03330;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_015545394.1;transl_table=4
##sequence-region NZ_LAUX01000101.1 1 7844
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000101.1	RefSeq	region	1	7844	.	+	.	ID=NZ_LAUX01000101.1:1..7844;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000101.1	RefSeq	gene	286	2421	.	+	.	ID=gene-MSCD_RS03335;Name=MSCD_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03335;old_locus_tag=MSCd_5800
NZ_LAUX01000101.1	Protein Homology	CDS	286	2421	.	+	0	ID=cds-WP_011166316.1;Parent=gene-MSCD_RS03335;Dbxref=GenBank:WP_011166316.1;Name=WP_011166316.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862507.1;locus_tag=MSCD_RS03335;product=S41 family peptidase;protein_id=WP_011166316.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	2485	2560	.	+	.	ID=gene-MSCD_RS03340;Name=MSCD_RS03340;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS03340;old_locus_tag=MSCd_5810
NZ_LAUX01000101.1	tRNAscan-SE	tRNA	2485	2560	.	+	.	ID=rna-MSCD_RS03340;Parent=gene-MSCD_RS03340;anticodon=(pos:2518..2520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS03340;product=tRNA-Lys
NZ_LAUX01000101.1	tRNAscan-SE	exon	2485	2560	.	+	.	ID=exon-MSCD_RS03340-1;Parent=rna-MSCD_RS03340;anticodon=(pos:2518..2520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS03340;product=tRNA-Lys
NZ_LAUX01000101.1	RefSeq	gene	2635	3387	.	+	.	ID=gene-MSCD_RS03345;Name=MSCD_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03345;old_locus_tag=MSCd_5820
NZ_LAUX01000101.1	Protein Homology	CDS	2635	3387	.	+	0	ID=cds-WP_011166315.1;Parent=gene-MSCD_RS03345;Dbxref=GenBank:WP_011166315.1;Name=WP_011166315.1;Ontology_term=GO:0009231,GO:0005524,GO:0008531,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,riboflavin kinase activity|0008531||IEA,metal ion binding|0046872||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166315.1;locus_tag=MSCD_RS03345;product=riboflavin kinase;protein_id=WP_011166315.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	3380	4249	.	+	.	ID=gene-MSCD_RS03350;Name=MSCD_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03350;old_locus_tag=MSCd_5830
NZ_LAUX01000101.1	Protein Homology	CDS	3380	4249	.	+	0	ID=cds-WP_011166314.1;Parent=gene-MSCD_RS03350;Dbxref=GenBank:WP_011166314.1;Name=WP_011166314.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362937.1;locus_tag=MSCD_RS03350;product=deoxyribonuclease IV;protein_id=WP_011166314.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	4275	5384	.	+	.	ID=gene-MSCD_RS03355;Name=MSCD_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03355;old_locus_tag=MSCd_5840
NZ_LAUX01000101.1	Protein Homology	CDS	4275	5384	.	+	0	ID=cds-WP_039275548.1;Parent=gene-MSCD_RS03355;Dbxref=GenBank:WP_039275548.1;Name=WP_039275548.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545631.1;locus_tag=MSCD_RS03355;product=lipoprotein;protein_id=WP_039275548.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	5396	5794	.	+	.	ID=gene-MSCD_RS03360;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=MSCD_RS03360;old_locus_tag=MSCd_5850
NZ_LAUX01000101.1	Protein Homology	CDS	5396	5794	.	+	0	ID=cds-WP_011166311.1;Parent=gene-MSCD_RS03360;Dbxref=GenBank:WP_011166311.1;Name=WP_011166311.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698065.1;locus_tag=MSCD_RS03360;product=transcription antitermination factor NusB;protein_id=WP_011166311.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	5796	7205	.	+	.	ID=gene-MSCD_RS03365;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=MSCD_RS03365;old_locus_tag=MSCd_5860
NZ_LAUX01000101.1	Protein Homology	CDS	5796	7205	.	+	0	ID=cds-WP_011166310.1;Parent=gene-MSCD_RS03365;Dbxref=GenBank:WP_011166310.1;Name=WP_011166310.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166310.1;locus_tag=MSCD_RS03365;product=exodeoxyribonuclease VII large subunit;protein_id=WP_011166310.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	7195	7410	.	+	.	ID=gene-MSCD_RS03370;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=MSCD_RS03370;old_locus_tag=MSCd_5870
NZ_LAUX01000101.1	Protein Homology	CDS	7195	7410	.	+	0	ID=cds-WP_011166309.1;Parent=gene-MSCD_RS03370;Dbxref=GenBank:WP_011166309.1;Name=WP_011166309.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166309.1;locus_tag=MSCD_RS03370;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011166309.1;transl_table=4
NZ_LAUX01000101.1	RefSeq	gene	7410	7844	.	+	.	ID=gene-MSCD_RS03375;Name=MSCD_RS03375;end_range=7844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03375;partial=true
NZ_LAUX01000101.1	Protein Homology	CDS	7410	7844	.	+	0	ID=cds-WP_258177036.1;Parent=gene-MSCD_RS03375;Dbxref=GenBank:WP_258177036.1;Name=WP_258177036.1;Ontology_term=GO:0032259,GO:0008168;end_range=7844,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447416.1;locus_tag=MSCD_RS03375;partial=true;product=SAM-dependent methyltransferase;protein_id=WP_258177036.1;transl_table=4
##sequence-region NZ_LAUX01000102.1 1 22977
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000102.1	RefSeq	region	1	22977	.	+	.	ID=NZ_LAUX01000102.1:1..22977;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000102.1	RefSeq	gene	41	598	.	-	.	ID=gene-MSCD_RS03380;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=MSCD_RS03380;old_locus_tag=MSCd_5880
NZ_LAUX01000102.1	Protein Homology	CDS	41	598	.	-	0	ID=cds-WP_015545517.1;Parent=gene-MSCD_RS03380;Dbxref=GenBank:WP_015545517.1;Name=WP_015545517.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545517.1;locus_tag=MSCD_RS03380;product=dephospho-CoA kinase;protein_id=WP_015545517.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	600	875	.	-	.	ID=gene-MSCD_RS03385;Name=MSCD_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03385;old_locus_tag=MSCd_5890
NZ_LAUX01000102.1	Protein Homology	CDS	600	875	.	-	0	ID=cds-WP_011166305.1;Parent=gene-MSCD_RS03385;Dbxref=GenBank:WP_011166305.1;Name=WP_011166305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729250.1;locus_tag=MSCD_RS03385;product=hypothetical protein;protein_id=WP_011166305.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	pseudogene	1441	2735	.	-	.	ID=gene-MSCD_RS04940;Name=MSCD_RS04940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04940;pseudo=true
NZ_LAUX01000102.1	Protein Homology	CDS	1441	2735	.	-	0	ID=cds-MSCD_RS04940;Parent=gene-MSCD_RS04940;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269195.1;locus_tag=MSCD_RS04940;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	3272	3826	.	-	.	ID=gene-MSCD_RS05470;Name=MSCD_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05470;old_locus_tag=MSCd_5920
NZ_LAUX01000102.1	Protein Homology	CDS	3272	3826	.	-	0	ID=cds-WP_011166302.1;Parent=gene-MSCD_RS05470;Dbxref=GenBank:WP_011166302.1;Name=WP_011166302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166302.1;locus_tag=MSCD_RS05470;product=DUF4357 domain-containing protein;protein_id=WP_011166302.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	pseudogene	3986	4901	.	-	.	ID=gene-MSCD_RS03410;Name=MSCD_RS03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03410;pseudo=true
NZ_LAUX01000102.1	Protein Homology	CDS	3986	4901	.	-	0	ID=cds-MSCD_RS03410;Parent=gene-MSCD_RS03410;Note=frameshifted;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698226.1;locus_tag=MSCD_RS03410;product=5'-3' exonuclease;pseudo=true;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	4977	5552	.	-	.	ID=gene-MSCD_RS03415;Name=MSCD_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03415;old_locus_tag=MSCd_5940
NZ_LAUX01000102.1	Protein Homology	CDS	4977	5552	.	-	0	ID=cds-WP_011166300.1;Parent=gene-MSCD_RS03415;Dbxref=GenBank:WP_011166300.1;Name=WP_011166300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698225.1;locus_tag=MSCD_RS03415;product=IMPACT family protein;protein_id=WP_011166300.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	5643	8477	.	+	.	ID=gene-MSCD_RS03420;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=MSCD_RS03420;old_locus_tag=MSCd_5950
NZ_LAUX01000102.1	Protein Homology	CDS	5643	8477	.	+	0	ID=cds-WP_011166299.1;Parent=gene-MSCD_RS03420;Dbxref=GenBank:WP_011166299.1;Name=WP_011166299.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166299.1;locus_tag=MSCD_RS03420;product=preprotein translocase subunit SecA;protein_id=WP_011166299.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	8592	9308	.	+	.	ID=gene-MSCD_RS03425;Name=MSCD_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03425;old_locus_tag=MSCd_5960
NZ_LAUX01000102.1	Protein Homology	CDS	8592	9308	.	+	0	ID=cds-WP_015545282.1;Parent=gene-MSCD_RS03425;Dbxref=GenBank:WP_015545282.1;Name=WP_015545282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862491.1;locus_tag=MSCD_RS03425;product=hypothetical protein;protein_id=WP_015545282.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	9292	10023	.	+	.	ID=gene-MSCD_RS03430;Name=MSCD_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03430;old_locus_tag=MSCd_5970
NZ_LAUX01000102.1	Protein Homology	CDS	9292	10023	.	+	0	ID=cds-WP_045596386.1;Parent=gene-MSCD_RS03430;Dbxref=GenBank:WP_045596386.1;Name=WP_045596386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166297.1;locus_tag=MSCD_RS03430;product=hypothetical protein;protein_id=WP_045596386.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	10350	10595	.	+	.	ID=gene-MSCD_RS03435;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=MSCD_RS03435;old_locus_tag=MSCd_5980
NZ_LAUX01000102.1	Protein Homology	CDS	10350	10595	.	+	0	ID=cds-WP_008362910.1;Parent=gene-MSCD_RS03435;Dbxref=GenBank:WP_008362910.1;Name=WP_008362910.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387649.1;locus_tag=MSCD_RS03435;product=30S ribosomal protein S20;protein_id=WP_008362910.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	10643	12001	.	-	.	ID=gene-MSCD_RS03440;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=MSCD_RS03440;old_locus_tag=MSCd_5990
NZ_LAUX01000102.1	Protein Homology	CDS	10643	12001	.	-	0	ID=cds-WP_011166295.1;Parent=gene-MSCD_RS03440;Dbxref=GenBank:WP_011166295.1;Name=WP_011166295.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166295.1;locus_tag=MSCD_RS03440;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_011166295.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	12201	12425	.	+	.	ID=gene-MSCD_RS03445;Name=MSCD_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03445;old_locus_tag=MSCd_6000
NZ_LAUX01000102.1	Protein Homology	CDS	12201	12425	.	+	0	ID=cds-WP_011166294.1;Parent=gene-MSCD_RS03445;Dbxref=GenBank:WP_011166294.1;Name=WP_011166294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387651.1;locus_tag=MSCD_RS03445;product=DUF2188 domain-containing protein;protein_id=WP_011166294.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	12519	13478	.	+	.	ID=gene-MSCD_RS03450;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=MSCD_RS03450;old_locus_tag=MSCd_6010
NZ_LAUX01000102.1	Protein Homology	CDS	12519	13478	.	+	0	ID=cds-WP_015545253.1;Parent=gene-MSCD_RS03450;Dbxref=GenBank:WP_015545253.1;Name=WP_015545253.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448099.1;locus_tag=MSCD_RS03450;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_015545253.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	13501	14631	.	+	.	ID=gene-MSCD_RS03455;Name=MSCD_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03455;old_locus_tag=MSCd_6020
NZ_LAUX01000102.1	Protein Homology	CDS	13501	14631	.	+	0	ID=cds-WP_011166292.1;Parent=gene-MSCD_RS03455;Dbxref=GenBank:WP_011166292.1;Name=WP_011166292.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862477.1;locus_tag=MSCD_RS03455;product=alpha/beta hydrolase;protein_id=WP_011166292.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	14642	15481	.	+	.	ID=gene-MSCD_RS03460;Name=MSCD_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03460;old_locus_tag=MSCd_6030
NZ_LAUX01000102.1	Protein Homology	CDS	14642	15481	.	+	0	ID=cds-WP_011166291.1;Parent=gene-MSCD_RS03460;Dbxref=GenBank:WP_011166291.1;Name=WP_011166291.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862476.1;locus_tag=MSCD_RS03460;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011166291.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	15490	16854	.	+	.	ID=gene-MSCD_RS03465;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=MSCD_RS03465;old_locus_tag=MSCd_6040
NZ_LAUX01000102.1	Protein Homology	CDS	15490	16854	.	+	0	ID=cds-WP_015545614.1;Parent=gene-MSCD_RS03465;Dbxref=GenBank:WP_015545614.1;Name=WP_015545614.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362895.1;locus_tag=MSCD_RS03465;product=asparagine--tRNA ligase;protein_id=WP_015545614.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	17145	18488	.	+	.	ID=gene-MSCD_RS03470;Name=MSCD_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03470;old_locus_tag=MSCd_6050
NZ_LAUX01000102.1	Protein Homology	CDS	17145	18488	.	+	0	ID=cds-WP_015545270.1;Parent=gene-MSCD_RS03470;Dbxref=GenBank:WP_015545270.1;Name=WP_015545270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166289.1;locus_tag=MSCD_RS03470;product=substrate-binding domain-containing protein;protein_id=WP_015545270.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	18502	19254	.	+	.	ID=gene-MSCD_RS03475;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=MSCD_RS03475;old_locus_tag=MSCd_6060
NZ_LAUX01000102.1	Protein Homology	CDS	18502	19254	.	+	0	ID=cds-WP_107682111.1;Parent=gene-MSCD_RS03475;Dbxref=GenBank:WP_107682111.1;Name=WP_107682111.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166288.1;locus_tag=MSCD_RS03475;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_107682111.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	19258	21990	.	+	.	ID=gene-MSCD_RS03480;Name=MSCD_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03480;old_locus_tag=MSCd_6070
NZ_LAUX01000102.1	Protein Homology	CDS	19258	21990	.	+	0	ID=cds-WP_015545312.1;Parent=gene-MSCD_RS03480;Dbxref=GenBank:WP_015545312.1;Name=WP_015545312.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387658.1;locus_tag=MSCD_RS03480;product=PhnE/PtxC family ABC transporter permease;protein_id=WP_015545312.1;transl_table=4
NZ_LAUX01000102.1	RefSeq	gene	22023	22977	.	-	.	ID=gene-MSCD_RS03485;Name=MSCD_RS03485;end_range=22977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03485;partial=true
NZ_LAUX01000102.1	Protein Homology	CDS	22023	22977	.	-	1	ID=cds-WP_181256863.1;Parent=gene-MSCD_RS03485;Dbxref=GenBank:WP_181256863.1;Name=WP_181256863.1;Ontology_term=GO:0030420,GO:0016787,GO:0046872,GO:0016020;end_range=22977,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729220.1;locus_tag=MSCD_RS03485;partial=true;product=ComEC/Rec2 family competence protein;protein_id=WP_181256863.1;transl_table=4
##sequence-region NZ_LAUX01000103.1 1 4914
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000103.1	RefSeq	region	1	4914	.	+	.	ID=NZ_LAUX01000103.1:1..4914;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000103.1	RefSeq	gene	80	1602	.	+	.	ID=gene-MSCD_RS03490;Name=MSCD_RS03490;gbkey=Gene;gene_biotype=rRNA;locus_tag=MSCD_RS03490;old_locus_tag=MSCd_6080
NZ_LAUX01000103.1	cmsearch	rRNA	80	1602	.	+	.	ID=rna-MSCD_RS03490;Parent=gene-MSCD_RS03490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03490;product=16S ribosomal RNA
NZ_LAUX01000103.1	cmsearch	exon	80	1602	.	+	.	ID=exon-MSCD_RS03490-1;Parent=rna-MSCD_RS03490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03490;product=16S ribosomal RNA
NZ_LAUX01000103.1	RefSeq	gene	1831	4741	.	+	.	ID=gene-MSCD_RS03495;Name=MSCD_RS03495;gbkey=Gene;gene_biotype=rRNA;locus_tag=MSCD_RS03495;old_locus_tag=MSCd_6090
NZ_LAUX01000103.1	cmsearch	rRNA	1831	4741	.	+	.	ID=rna-MSCD_RS03495;Parent=gene-MSCD_RS03495;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03495;product=23S ribosomal RNA
NZ_LAUX01000103.1	cmsearch	exon	1831	4741	.	+	.	ID=exon-MSCD_RS03495-1;Parent=rna-MSCD_RS03495;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03495;product=23S ribosomal RNA
NZ_LAUX01000103.1	RefSeq	gene	4805	4913	.	+	.	ID=gene-MSCD_RS03500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=MSCD_RS03500;old_locus_tag=MSCd_6100
NZ_LAUX01000103.1	cmsearch	rRNA	4805	4913	.	+	.	ID=rna-MSCD_RS03500;Parent=gene-MSCD_RS03500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03500;product=5S ribosomal RNA
NZ_LAUX01000103.1	cmsearch	exon	4805	4913	.	+	.	ID=exon-MSCD_RS03500-1;Parent=rna-MSCD_RS03500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03500;product=5S ribosomal RNA
##sequence-region NZ_LAUX01000104.1 1 8470
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000104.1	RefSeq	region	1	8470	.	+	.	ID=NZ_LAUX01000104.1:1..8470;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000104.1	RefSeq	gene	31	1533	.	-	.	ID=gene-MSCD_RS03505;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=MSCD_RS03505;old_locus_tag=MSCd_6110
NZ_LAUX01000104.1	Protein Homology	CDS	31	1533	.	-	0	ID=cds-WP_011166280.1;Parent=gene-MSCD_RS03505;Dbxref=GenBank:WP_011166280.1;Name=WP_011166280.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862469.1;locus_tag=MSCD_RS03505;product=lysine--tRNA ligase;protein_id=WP_011166280.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	1536	2510	.	-	.	ID=gene-MSCD_RS03510;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=MSCD_RS03510;old_locus_tag=MSCd_6120
NZ_LAUX01000104.1	Protein Homology	CDS	1536	2510	.	-	0	ID=cds-WP_011166279.1;Parent=gene-MSCD_RS03510;Dbxref=GenBank:WP_011166279.1;Name=WP_011166279.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862468.1;locus_tag=MSCD_RS03510;product=tRNA dihydrouridine synthase DusB;protein_id=WP_011166279.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	2512	2826	.	-	.	ID=gene-MSCD_RS03515;Name=MSCD_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03515;old_locus_tag=MSCd_6130
NZ_LAUX01000104.1	Protein Homology	CDS	2512	2826	.	-	0	ID=cds-WP_011166278.1;Parent=gene-MSCD_RS03515;Dbxref=GenBank:WP_011166278.1;Name=WP_011166278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166278.1;locus_tag=MSCD_RS03515;product=DUF1904 family protein;protein_id=WP_011166278.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	2928	4196	.	-	.	ID=gene-MSCD_RS03520;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=MSCD_RS03520;old_locus_tag=MSCd_6140
NZ_LAUX01000104.1	Protein Homology	CDS	2928	4196	.	-	0	ID=cds-WP_011166277.1;Parent=gene-MSCD_RS03520;Dbxref=GenBank:WP_011166277.1;Name=WP_011166277.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166277.1;locus_tag=MSCD_RS03520;product=serine--tRNA ligase;protein_id=WP_011166277.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	pseudogene	4278	5101	.	-	.	ID=gene-MSCD_RS05690;Name=MSCD_RS05690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05690;pseudo=true
NZ_LAUX01000104.1	Protein Homology	CDS	4278	5101	.	-	0	ID=cds-MSCD_RS05690;Parent=gene-MSCD_RS05690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862465.1;locus_tag=MSCD_RS05690;product=SPE_1075/MLC_0560 family membrane protein;pseudo=true;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	5502	6614	.	-	.	ID=gene-MSCD_RS03530;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=MSCD_RS03530;old_locus_tag=MSCd_6170
NZ_LAUX01000104.1	Protein Homology	CDS	5502	6614	.	-	0	ID=cds-WP_015545592.1;Parent=gene-MSCD_RS03530;Dbxref=GenBank:WP_015545592.1;Name=WP_015545592.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448114.1;locus_tag=MSCD_RS03530;product=alanine dehydrogenase;protein_id=WP_015545592.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	6729	7310	.	-	.	ID=gene-MSCD_RS03535;Name=MSCD_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03535;old_locus_tag=MSCd_6180
NZ_LAUX01000104.1	Protein Homology	CDS	6729	7310	.	-	0	ID=cds-WP_011166274.1;Parent=gene-MSCD_RS03535;Dbxref=GenBank:WP_011166274.1;Name=WP_011166274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862463.1;locus_tag=MSCD_RS03535;product=ECF transporter S component family protein;protein_id=WP_011166274.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	7329	7619	.	-	.	ID=gene-MSCD_RS03540;Name=MSCD_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03540;old_locus_tag=MSCd_6190
NZ_LAUX01000104.1	Protein Homology	CDS	7329	7619	.	-	0	ID=cds-WP_015545644.1;Parent=gene-MSCD_RS03540;Dbxref=GenBank:WP_015545644.1;Name=WP_015545644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387668.1;locus_tag=MSCD_RS03540;product=hypothetical protein;protein_id=WP_015545644.1;transl_table=4
NZ_LAUX01000104.1	RefSeq	gene	7802	8470	.	+	.	ID=gene-MSCD_RS03545;Name=MSCD_RS03545;end_range=8470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03545;partial=true
NZ_LAUX01000104.1	Protein Homology	CDS	7802	8470	.	+	0	ID=cds-WP_107682112.1;Parent=gene-MSCD_RS03545;Dbxref=GenBank:WP_107682112.1;Name=WP_107682112.1;end_range=8470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166272.1;locus_tag=MSCD_RS03545;partial=true;product=hypothetical protein;protein_id=WP_107682112.1;transl_table=4
##sequence-region NZ_LAUX01000105.1 1 17356
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000105.1	RefSeq	region	1	17356	.	+	.	ID=NZ_LAUX01000105.1:1..17356;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000105.1	RefSeq	gene	29	1771	.	-	.	ID=gene-MSCD_RS03550;Name=MSCD_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03550;old_locus_tag=MSCd_6200
NZ_LAUX01000105.1	Protein Homology	CDS	29	1771	.	-	0	ID=cds-WP_015545481.1;Parent=gene-MSCD_RS03550;Dbxref=GenBank:WP_015545481.1;Name=WP_015545481.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166265.1;locus_tag=MSCD_RS03550;product=PTS transporter subunit EIIC;protein_id=WP_015545481.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	1842	2291	.	+	.	ID=gene-MSCD_RS03555;Name=MSCD_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03555;old_locus_tag=MSCd_6210
NZ_LAUX01000105.1	Protein Homology	CDS	1842	2291	.	+	0	ID=cds-WP_011166264.1;Parent=gene-MSCD_RS03555;Dbxref=GenBank:WP_011166264.1;Name=WP_011166264.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862459.1;locus_tag=MSCD_RS03555;product=peroxiredoxin;protein_id=WP_011166264.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	pseudogene	2441	4544	.	+	.	ID=gene-MSCD_RS03560;Name=MSCD_RS03560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03560;old_locus_tag=MSCd_6220;pseudo=true
NZ_LAUX01000105.1	Protein Homology	CDS	2441	4544	.	+	0	ID=cds-MSCD_RS03560;Parent=gene-MSCD_RS03560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363206.1;locus_tag=MSCD_RS03560;product=MAG2960 family serine endopeptidase lipoprotein;pseudo=true;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	4650	4958	.	+	.	ID=gene-MSCD_RS03565;Name=MSCD_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03565;old_locus_tag=MSCd_6230
NZ_LAUX01000105.1	GeneMarkS-2+	CDS	4650	4958	.	+	0	ID=cds-WP_227716899.1;Parent=gene-MSCD_RS03565;Dbxref=GenBank:WP_227716899.1;Name=WP_227716899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS03565;product=hypothetical protein;protein_id=WP_227716899.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	5093	5620	.	+	.	ID=gene-MSCD_RS03570;Name=MSCD_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03570;old_locus_tag=MSCd_6240
NZ_LAUX01000105.1	Protein Homology	CDS	5093	5620	.	+	0	ID=cds-WP_015545611.1;Parent=gene-MSCD_RS03570;Dbxref=GenBank:WP_015545611.1;Name=WP_015545611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545611.1;locus_tag=MSCD_RS03570;product=hypothetical protein;protein_id=WP_015545611.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	5971	6933	.	+	.	ID=gene-MSCD_RS03580;Name=MSCD_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03580;old_locus_tag=MSCd_6250
NZ_LAUX01000105.1	Protein Homology	CDS	5971	6933	.	+	0	ID=cds-WP_015545495.1;Parent=gene-MSCD_RS03580;Dbxref=GenBank:WP_015545495.1;Name=WP_015545495.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862456.1;locus_tag=MSCD_RS03580;product=GMP reductase;protein_id=WP_015545495.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	6973	7068	.	+	.	ID=gene-MSCD_RS03585;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=MSCD_RS03585
NZ_LAUX01000105.1	cmsearch	SRP_RNA	6973	7068	.	+	.	ID=rna-MSCD_RS03585;Parent=gene-MSCD_RS03585;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03585;product=signal recognition particle sRNA small type
NZ_LAUX01000105.1	cmsearch	exon	6973	7068	.	+	.	ID=exon-MSCD_RS03585-1;Parent=rna-MSCD_RS03585;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS03585;product=signal recognition particle sRNA small type
NZ_LAUX01000105.1	RefSeq	gene	7074	7517	.	+	.	ID=gene-MSCD_RS03590;Name=MSCD_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03590;old_locus_tag=MSCd_6260
NZ_LAUX01000105.1	Protein Homology	CDS	7074	7517	.	+	0	ID=cds-WP_015545301.1;Parent=gene-MSCD_RS03590;Dbxref=GenBank:WP_015545301.1;Name=WP_015545301.1;Ontology_term=GO:0009116,GO:0001882,GO:0008270,GO:0019239;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447332.1;locus_tag=MSCD_RS03590;product=nucleoside deaminase;protein_id=WP_015545301.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	7599	9545	.	+	.	ID=gene-MSCD_RS03595;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=MSCD_RS03595;old_locus_tag=MSCd_6270
NZ_LAUX01000105.1	Protein Homology	CDS	7599	9545	.	+	0	ID=cds-WP_181256864.1;Parent=gene-MSCD_RS03595;Dbxref=GenBank:WP_181256864.1;Name=WP_181256864.1;Ontology_term=GO:0006260,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545330.1;locus_tag=MSCD_RS03595;product=DNA polymerase III subunit gamma/tau;protein_id=WP_181256864.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	pseudogene	9547	10136	.	+	.	ID=gene-MSCD_RS05695;Name=recR;gbkey=Gene;gene=recR;gene_biotype=pseudogene;locus_tag=MSCD_RS05695;pseudo=true
NZ_LAUX01000105.1	Protein Homology	CDS	9547	10136	.	+	0	ID=cds-MSCD_RS05695;Parent=gene-MSCD_RS05695;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447334.1;locus_tag=MSCD_RS05695;product=recombination mediator RecR;pseudo=true;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	10139	10780	.	+	.	ID=gene-MSCD_RS03605;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=MSCD_RS03605;old_locus_tag=MSCd_6290
NZ_LAUX01000105.1	Protein Homology	CDS	10139	10780	.	+	0	ID=cds-WP_011166257.1;Parent=gene-MSCD_RS03605;Dbxref=GenBank:WP_011166257.1;Name=WP_011166257.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862452.1;locus_tag=MSCD_RS03605;product=dTMP kinase;protein_id=WP_011166257.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	10758	11498	.	+	.	ID=gene-MSCD_RS03610;Name=MSCD_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03610;old_locus_tag=MSCd_6300
NZ_LAUX01000105.1	Protein Homology	CDS	10758	11498	.	+	0	ID=cds-WP_011166256.1;Parent=gene-MSCD_RS03610;Dbxref=GenBank:WP_011166256.1;Name=WP_011166256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698185.1;locus_tag=MSCD_RS03610;product=DNA polymerase III delta subunit-related protein;protein_id=WP_011166256.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	11498	12220	.	+	.	ID=gene-MSCD_RS03615;Name=MSCD_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03615;old_locus_tag=MSCd_6310
NZ_LAUX01000105.1	Protein Homology	CDS	11498	12220	.	+	0	ID=cds-WP_011166255.1;Parent=gene-MSCD_RS03615;Dbxref=GenBank:WP_011166255.1;Name=WP_011166255.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862450.1;locus_tag=MSCD_RS03615;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_011166255.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	12272	13099	.	+	.	ID=gene-MSCD_RS03620;Name=MSCD_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03620;old_locus_tag=MSCd_6320
NZ_LAUX01000105.1	Protein Homology	CDS	12272	13099	.	+	0	ID=cds-WP_015545419.1;Parent=gene-MSCD_RS03620;Dbxref=GenBank:WP_015545419.1;Name=WP_015545419.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729196.1;locus_tag=MSCD_RS03620;product=MurR/RpiR family transcriptional regulator;protein_id=WP_015545419.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	13102	14307	.	+	.	ID=gene-MSCD_RS03625;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=MSCD_RS03625;old_locus_tag=MSCd_6330
NZ_LAUX01000105.1	Protein Homology	CDS	13102	14307	.	+	0	ID=cds-WP_011166253.1;Parent=gene-MSCD_RS03625;Dbxref=GenBank:WP_011166253.1;Name=WP_011166253.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729195.1;locus_tag=MSCD_RS03625;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_011166253.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	14291	14755	.	-	.	ID=gene-MSCD_RS05495;Name=MSCD_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05495;old_locus_tag=MSCd_6340
NZ_LAUX01000105.1	Protein Homology	CDS	14291	14755	.	-	0	ID=cds-WP_308506914.1;Parent=gene-MSCD_RS05495;Dbxref=GenBank:WP_308506914.1;Name=WP_308506914.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.7;locus_tag=MSCD_RS05495;product=DUF3800 domain-containing protein;protein_id=WP_308506914.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	14752	15135	.	-	.	ID=gene-MSCD_RS05500;Name=MSCD_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05500;old_locus_tag=MSCd_6350
NZ_LAUX01000105.1	Protein Homology	CDS	14752	15135	.	-	0	ID=cds-WP_011166251.1;Parent=gene-MSCD_RS05500;Dbxref=GenBank:WP_011166251.1;Name=WP_011166251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.7;locus_tag=MSCD_RS05500;product=DUF3800 domain-containing protein;protein_id=WP_011166251.1;transl_table=4
NZ_LAUX01000105.1	RefSeq	gene	15367	17313	.	+	.	ID=gene-MSCD_RS03635;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=MSCD_RS03635;old_locus_tag=MSCd_6360
NZ_LAUX01000105.1	Protein Homology	CDS	15367	17313	.	+	0	ID=cds-WP_015545357.1;Parent=gene-MSCD_RS03635;Dbxref=GenBank:WP_015545357.1;Name=WP_015545357.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447341.1;locus_tag=MSCD_RS03635;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_015545357.1;transl_table=4
##sequence-region NZ_LAUX01000134.1 1 1023
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000134.1	RefSeq	region	1	1023	.	+	.	ID=NZ_LAUX01000134.1:1..1023;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000134.1	RefSeq	gene	1	1022	.	-	.	ID=gene-MSCD_RS05040;Name=MSCD_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05040;partial=true;start_range=.,1
NZ_LAUX01000134.1	Protein Homology	CDS	1	1022	.	-	0	ID=cds-WP_258177045.1;Parent=gene-MSCD_RS05040;Dbxref=GenBank:WP_258177045.1;Name=WP_258177045.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166972.1;locus_tag=MSCD_RS05040;partial=true;product=BspA family leucine-rich repeat surface protein;protein_id=WP_258177045.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000106.1 1 24082
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000106.1	RefSeq	region	1	24082	.	+	.	ID=NZ_LAUX01000106.1:1..24082;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000106.1	RefSeq	pseudogene	97	1384	.	-	.	ID=gene-MSCD_RS03640;Name=MSCD_RS03640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03640;old_locus_tag=MSCd_6380;pseudo=true
NZ_LAUX01000106.1	Protein Homology	CDS	97	1384	.	-	0	ID=cds-MSCD_RS03640;Parent=gene-MSCD_RS03640;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698179.1;locus_tag=MSCD_RS03640;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	1736	2860	.	-	.	ID=gene-MSCD_RS03645;Name=MSCD_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03645;old_locus_tag=MSCd_6390
NZ_LAUX01000106.1	Protein Homology	CDS	1736	2860	.	-	0	ID=cds-WP_011166246.1;Parent=gene-MSCD_RS03645;Dbxref=GenBank:WP_011166246.1;Name=WP_011166246.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862445.1;locus_tag=MSCD_RS03645;product=AEC family transporter;protein_id=WP_011166246.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	2879	3865	.	-	.	ID=gene-MSCD_RS03650;Name=MSCD_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03650;old_locus_tag=MSCd_6400
NZ_LAUX01000106.1	Protein Homology	CDS	2879	3865	.	-	0	ID=cds-WP_011166245.1;Parent=gene-MSCD_RS03650;Dbxref=GenBank:WP_011166245.1;Name=WP_011166245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862444.1;locus_tag=MSCD_RS03650;product=2-hydroxyacid dehydrogenase;protein_id=WP_011166245.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	4303	9690	.	-	.	ID=gene-MSCD_RS03655;Name=MSCD_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03655;old_locus_tag=MSCd_6410
NZ_LAUX01000106.1	Protein Homology	CDS	4303	9690	.	-	0	ID=cds-WP_039275519.1;Parent=gene-MSCD_RS03655;Dbxref=GenBank:WP_039275519.1;Name=WP_039275519.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166244.1;locus_tag=MSCD_RS03655;product=ABC transporter permease;protein_id=WP_039275519.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	9837	12989	.	+	.	ID=gene-MSCD_RS03660;Name=MSCD_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03660;old_locus_tag=MSCd_6420
NZ_LAUX01000106.1	Protein Homology	CDS	9837	12989	.	+	0	ID=cds-WP_107682114.1;Parent=gene-MSCD_RS03660;Dbxref=GenBank:WP_107682114.1;Name=WP_107682114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545413.1;locus_tag=MSCD_RS03660;product=STREFT protein;protein_id=WP_107682114.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	13198	14064	.	+	.	ID=gene-MSCD_RS03665;Name=MSCD_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03665;old_locus_tag=MSCd_6430
NZ_LAUX01000106.1	Protein Homology	CDS	13198	14064	.	+	0	ID=cds-WP_015545661.1;Parent=gene-MSCD_RS03665;Dbxref=GenBank:WP_015545661.1;Name=WP_015545661.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;go_function=obsolete unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862439.1;locus_tag=MSCD_RS03665;product=Hsp33 family molecular chaperone HslO;protein_id=WP_015545661.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	14112	15146	.	+	.	ID=gene-MSCD_RS03670;Name=MSCD_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03670;old_locus_tag=MSCd_6440
NZ_LAUX01000106.1	Protein Homology	CDS	14112	15146	.	+	0	ID=cds-WP_015545463.1;Parent=gene-MSCD_RS03670;Dbxref=GenBank:WP_015545463.1;Name=WP_015545463.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698171.1;locus_tag=MSCD_RS03670;product=ABC transporter ATP-binding protein;protein_id=WP_015545463.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	15183	15782	.	-	.	ID=gene-MSCD_RS03675;Name=MSCD_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03675;old_locus_tag=MSCd_6450
NZ_LAUX01000106.1	Protein Homology	CDS	15183	15782	.	-	0	ID=cds-WP_015545499.1;Parent=gene-MSCD_RS03675;Dbxref=GenBank:WP_015545499.1;Name=WP_015545499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729183.1;locus_tag=MSCD_RS03675;product=FMN-dependent NADH-azoreductase;protein_id=WP_015545499.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	15968	16177	.	+	.	ID=gene-MSCD_RS03680;Name=MSCD_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03680;old_locus_tag=MSCd_6460
NZ_LAUX01000106.1	Protein Homology	CDS	15968	16177	.	+	0	ID=cds-WP_015545525.1;Parent=gene-MSCD_RS03680;Dbxref=GenBank:WP_015545525.1;Name=WP_015545525.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362747.1;locus_tag=MSCD_RS03680;product=cold-shock protein;protein_id=WP_015545525.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	16383	16796	.	+	.	ID=gene-MSCD_RS03685;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=MSCD_RS03685;old_locus_tag=MSCd_6470
NZ_LAUX01000106.1	Protein Homology	CDS	16383	16796	.	+	0	ID=cds-WP_011166238.1;Parent=gene-MSCD_RS03685;Dbxref=GenBank:WP_011166238.1;Name=WP_011166238.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447353.1;locus_tag=MSCD_RS03685;product=30S ribosomal protein S6;protein_id=WP_011166238.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	16808	17248	.	+	.	ID=gene-MSCD_RS03690;Name=MSCD_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03690;old_locus_tag=MSCd_6480
NZ_LAUX01000106.1	Protein Homology	CDS	16808	17248	.	+	0	ID=cds-WP_011166237.1;Parent=gene-MSCD_RS03690;Dbxref=GenBank:WP_011166237.1;Name=WP_011166237.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386928.1;locus_tag=MSCD_RS03690;product=single-stranded DNA-binding protein;protein_id=WP_011166237.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	pseudogene	17268	17493	.	+	.	ID=gene-MSCD_RS03695;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=pseudogene;locus_tag=MSCD_RS03695;pseudo=true
NZ_LAUX01000106.1	Protein Homology	CDS	17268	17493	.	+	0	ID=cds-MSCD_RS03695;Parent=gene-MSCD_RS03695;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386929.1;locus_tag=MSCD_RS03695;product=30S ribosomal protein S18;pseudo=true;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	17847	18338	.	+	.	ID=gene-MSCD_RS05505;Name=MSCD_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05505;old_locus_tag=MSCd_6490
NZ_LAUX01000106.1	Protein Homology	CDS	17847	18338	.	+	0	ID=cds-WP_011166235.1;Parent=gene-MSCD_RS05505;Dbxref=GenBank:WP_011166235.1;Name=WP_011166235.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166235.1;locus_tag=MSCD_RS05505;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_011166235.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	18385	18996	.	+	.	ID=gene-MSCD_RS05510;Name=MSCD_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05510;old_locus_tag=MSCd_6500
NZ_LAUX01000106.1	Protein Homology	CDS	18385	18996	.	+	0	ID=cds-WP_011166234.1;Parent=gene-MSCD_RS05510;Dbxref=GenBank:WP_011166234.1;Name=WP_011166234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166234.1;locus_tag=MSCD_RS05510;product=ATP-binding protein;protein_id=WP_011166234.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	19026	19226	.	+	.	ID=gene-MSCD_RS05515;Name=MSCD_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05515;old_locus_tag=MSCd_6510
NZ_LAUX01000106.1	GeneMarkS-2+	CDS	19026	19226	.	+	0	ID=cds-WP_015545332.1;Parent=gene-MSCD_RS05515;Dbxref=GenBank:WP_015545332.1;Name=WP_015545332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05515;product=putative DNA binding domain-containing protein;protein_id=WP_015545332.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	19480	21039	.	+	.	ID=gene-MSCD_RS03705;Name=MSCD_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03705;old_locus_tag=MSCd_6520
NZ_LAUX01000106.1	Protein Homology	CDS	19480	21039	.	+	0	ID=cds-WP_015545511.1;Parent=gene-MSCD_RS03705;Dbxref=GenBank:WP_015545511.1;Name=WP_015545511.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729178.1;locus_tag=MSCD_RS03705;product=PTS transporter subunit EIIC;protein_id=WP_015545511.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	21039	21797	.	+	.	ID=gene-MSCD_RS03710;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=MSCD_RS03710;old_locus_tag=MSCd_6530
NZ_LAUX01000106.1	Protein Homology	CDS	21039	21797	.	+	0	ID=cds-WP_011166231.1;Parent=gene-MSCD_RS03710;Dbxref=GenBank:WP_011166231.1;Name=WP_011166231.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862436.1;locus_tag=MSCD_RS03710;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_011166231.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	21797	22225	.	+	.	ID=gene-MSCD_RS03715;Name=MSCD_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03715;old_locus_tag=MSCd_6540
NZ_LAUX01000106.1	Protein Homology	CDS	21797	22225	.	+	0	ID=cds-WP_011166230.1;Parent=gene-MSCD_RS03715;Dbxref=GenBank:WP_011166230.1;Name=WP_011166230.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698166.1;locus_tag=MSCD_RS03715;product=PTS mannitol transporter subunit IIA;protein_id=WP_011166230.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	22259	23056	.	+	.	ID=gene-MSCD_RS03720;Name=MSCD_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03720;old_locus_tag=MSCd_6550
NZ_LAUX01000106.1	Protein Homology	CDS	22259	23056	.	+	0	ID=cds-WP_011166229.1;Parent=gene-MSCD_RS03720;Dbxref=GenBank:WP_011166229.1;Name=WP_011166229.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862434.1;locus_tag=MSCD_RS03720;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011166229.1;transl_table=4
NZ_LAUX01000106.1	RefSeq	gene	23057	24043	.	+	.	ID=gene-MSCD_RS03725;Name=MSCD_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03725;old_locus_tag=MSCd_6560
NZ_LAUX01000106.1	Protein Homology	CDS	23057	24043	.	+	0	ID=cds-WP_011166228.1;Parent=gene-MSCD_RS03725;Dbxref=GenBank:WP_011166228.1;Name=WP_011166228.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862433.1;locus_tag=MSCD_RS03725;product=mannitol dehydrogenase family protein;protein_id=WP_011166228.1;transl_table=4
##sequence-region NZ_LAUX01000107.1 1 30319
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000107.1	RefSeq	region	1	30319	.	+	.	ID=NZ_LAUX01000107.1:1..30319;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000107.1	RefSeq	gene	29	1627	.	-	.	ID=gene-MSCD_RS03730;Name=MSCD_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03730;old_locus_tag=MSCd_6570
NZ_LAUX01000107.1	Protein Homology	CDS	29	1627	.	-	0	ID=cds-WP_107682115.1;Parent=gene-MSCD_RS03730;Dbxref=GenBank:WP_107682115.1;Name=WP_107682115.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_107682115.1;locus_tag=MSCD_RS03730;product=LppA family lipoprotein;protein_id=WP_107682115.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	1660	3306	.	-	.	ID=gene-MSCD_RS03735;Name=MSCD_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03735;old_locus_tag=MSCd_6580
NZ_LAUX01000107.1	Protein Homology	CDS	1660	3306	.	-	0	ID=cds-WP_045596367.1;Parent=gene-MSCD_RS03735;Dbxref=GenBank:WP_045596367.1;Name=WP_045596367.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166224.1;locus_tag=MSCD_RS03735;product=LppA family lipoprotein;protein_id=WP_045596367.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	3510	5039	.	+	.	ID=gene-MSCD_RS03740;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=MSCD_RS03740;old_locus_tag=MSCd_6590
NZ_LAUX01000107.1	Protein Homology	CDS	3510	5039	.	+	0	ID=cds-WP_011166223.1;Parent=gene-MSCD_RS03740;Dbxref=GenBank:WP_011166223.1;Name=WP_011166223.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698156.1;locus_tag=MSCD_RS03740;product=methionine--tRNA ligase;protein_id=WP_011166223.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	5224	6876	.	+	.	ID=gene-MSCD_RS03745;Name=MSCD_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03745;old_locus_tag=MSCd_6600
NZ_LAUX01000107.1	Protein Homology	CDS	5224	6876	.	+	0	ID=cds-WP_015545632.1;Parent=gene-MSCD_RS03745;Dbxref=GenBank:WP_015545632.1;Name=WP_015545632.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545632.1;locus_tag=MSCD_RS03745;product=BMP family ABC transporter substrate-binding protein;protein_id=WP_015545632.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	6879	8495	.	+	.	ID=gene-MSCD_RS03750;Name=MSCD_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03750;old_locus_tag=MSCd_6610
NZ_LAUX01000107.1	Protein Homology	CDS	6879	8495	.	+	0	ID=cds-WP_107682116.1;Parent=gene-MSCD_RS03750;Dbxref=GenBank:WP_107682116.1;Name=WP_107682116.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698154.1;locus_tag=MSCD_RS03750;product=ABC transporter ATP-binding protein;protein_id=WP_107682116.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	8485	11052	.	+	.	ID=gene-MSCD_RS03755;Name=MSCD_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03755;old_locus_tag=MSCd_6620
NZ_LAUX01000107.1	Protein Homology	CDS	8485	11052	.	+	0	ID=cds-WP_015545679.1;Parent=gene-MSCD_RS03755;Dbxref=GenBank:WP_015545679.1;Name=WP_015545679.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545679.1;locus_tag=MSCD_RS03755;product=ABC transporter permease subunit;protein_id=WP_015545679.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	11052	12029	.	+	.	ID=gene-MSCD_RS03760;Name=MSCD_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03760;old_locus_tag=MSCd_6630
NZ_LAUX01000107.1	Protein Homology	CDS	11052	12029	.	+	0	ID=cds-WP_107682117.1;Parent=gene-MSCD_RS03760;Dbxref=GenBank:WP_107682117.1;Name=WP_107682117.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729166.1;locus_tag=MSCD_RS03760;product=ABC transporter permease;protein_id=WP_107682117.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	12080	14584	.	-	.	ID=gene-MSCD_RS03765;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=MSCD_RS03765;old_locus_tag=MSCd_6640
NZ_LAUX01000107.1	Protein Homology	CDS	12080	14584	.	-	0	ID=cds-WP_045596363.1;Parent=gene-MSCD_RS03765;Dbxref=GenBank:WP_045596363.1;Name=WP_045596363.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862422.1;locus_tag=MSCD_RS03765;product=DNA gyrase subunit A;protein_id=WP_045596363.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	14600	16504	.	-	.	ID=gene-MSCD_RS03770;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=MSCD_RS03770;old_locus_tag=MSCd_6650
NZ_LAUX01000107.1	Protein Homology	CDS	14600	16504	.	-	0	ID=cds-WP_107682118.1;Parent=gene-MSCD_RS03770;Dbxref=GenBank:WP_107682118.1;Name=WP_107682118.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862421.1;locus_tag=MSCD_RS03770;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_107682118.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	16864	17955	.	-	.	ID=gene-MSCD_RS03775;Name=MSCD_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03775;old_locus_tag=MSCd_6660
NZ_LAUX01000107.1	Protein Homology	CDS	16864	17955	.	-	0	ID=cds-WP_011166216.1;Parent=gene-MSCD_RS03775;Dbxref=GenBank:WP_011166216.1;Name=WP_011166216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166216.1;locus_tag=MSCD_RS03775;product=hypothetical protein;protein_id=WP_011166216.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	18012	18812	.	-	.	ID=gene-MSCD_RS03780;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=MSCD_RS03780;old_locus_tag=MSCd_6670
NZ_LAUX01000107.1	Protein Homology	CDS	18012	18812	.	-	0	ID=cds-WP_011166215.1;Parent=gene-MSCD_RS03780;Dbxref=GenBank:WP_011166215.1;Name=WP_011166215.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447330.1;locus_tag=MSCD_RS03780;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_011166215.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	18812	19345	.	-	.	ID=gene-MSCD_RS03785;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=MSCD_RS03785;old_locus_tag=MSCd_6680
NZ_LAUX01000107.1	Protein Homology	CDS	18812	19345	.	-	0	ID=cds-WP_011166214.1;Parent=gene-MSCD_RS03785;Dbxref=GenBank:WP_011166214.1;Name=WP_011166214.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166214.1;locus_tag=MSCD_RS03785;product=ribonuclease M5;protein_id=WP_011166214.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	19382	20509	.	-	.	ID=gene-MSCD_RS03790;Name=MSCD_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03790;old_locus_tag=MSCd_6690
NZ_LAUX01000107.1	Protein Homology	CDS	19382	20509	.	-	0	ID=cds-WP_011166213.1;Parent=gene-MSCD_RS03790;Dbxref=GenBank:WP_011166213.1;Name=WP_011166213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698146.1;locus_tag=MSCD_RS03790;product=DNA polymerase III subunit beta;protein_id=WP_011166213.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	20671	22023	.	-	.	ID=gene-MSCD_RS03795;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=MSCD_RS03795;old_locus_tag=MSCd_6700
NZ_LAUX01000107.1	Protein Homology	CDS	20671	22023	.	-	0	ID=cds-WP_039275826.1;Parent=gene-MSCD_RS03795;Dbxref=GenBank:WP_039275826.1;Name=WP_039275826.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698145.1;locus_tag=MSCD_RS03795;product=chromosomal replication initiator protein DnaA;protein_id=WP_039275826.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	22316	22450	.	+	.	ID=gene-MSCD_RS03800;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=MSCD_RS03800;old_locus_tag=MSCd_6710
NZ_LAUX01000107.1	Protein Homology	CDS	22316	22450	.	+	0	ID=cds-WP_015545533.1;Parent=gene-MSCD_RS03800;Dbxref=GenBank:WP_015545533.1;Name=WP_015545533.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269762.1;locus_tag=MSCD_RS03800;product=50S ribosomal protein L34;protein_id=WP_015545533.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	22457	22786	.	+	.	ID=gene-MSCD_RS03805;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=MSCD_RS03805;old_locus_tag=MSCd_6720
NZ_LAUX01000107.1	Protein Homology	CDS	22457	22786	.	+	0	ID=cds-WP_011167186.1;Parent=gene-MSCD_RS03805;Dbxref=GenBank:WP_011167186.1;Name=WP_011167186.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863082.1;locus_tag=MSCD_RS03805;product=ribonuclease P protein component;protein_id=WP_011167186.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	22804	23994	.	+	.	ID=gene-MSCD_RS03810;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=MSCD_RS03810;old_locus_tag=MSCd_6730
NZ_LAUX01000107.1	Protein Homology	CDS	22804	23994	.	+	0	ID=cds-WP_011167185.1;Parent=gene-MSCD_RS03810;Dbxref=GenBank:WP_011167185.1;Name=WP_011167185.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863081.1;locus_tag=MSCD_RS03810;product=membrane protein insertase YidC;protein_id=WP_011167185.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	24071	24865	.	+	.	ID=gene-MSCD_RS03815;Name=MSCD_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03815;old_locus_tag=MSCd_6740
NZ_LAUX01000107.1	Protein Homology	CDS	24071	24865	.	+	0	ID=cds-WP_107682119.1;Parent=gene-MSCD_RS03815;Dbxref=GenBank:WP_107682119.1;Name=WP_107682119.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863080.1;locus_tag=MSCD_RS03815;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_107682119.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	24865	25581	.	+	.	ID=gene-MSCD_RS03820;Name=MSCD_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03820;old_locus_tag=MSCd_6750
NZ_LAUX01000107.1	Protein Homology	CDS	24865	25581	.	+	0	ID=cds-WP_015545424.1;Parent=gene-MSCD_RS03820;Dbxref=GenBank:WP_015545424.1;Name=WP_015545424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863079.1;locus_tag=MSCD_RS03820;product=phosphotransferase;protein_id=WP_015545424.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	25639	26796	.	+	.	ID=gene-MSCD_RS03825;Name=MSCD_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03825;old_locus_tag=MSCd_6760
NZ_LAUX01000107.1	Protein Homology	CDS	25639	26796	.	+	0	ID=cds-WP_015545469.1;Parent=gene-MSCD_RS03825;Dbxref=GenBank:WP_015545469.1;Name=WP_015545469.1;Ontology_term=GO:0008610,GO:0046839,GO:0042577;gbkey=CDS;go_function=lipid phosphatase activity|0042577||IEA;go_process=lipid biosynthetic process|0008610||IEA,phospholipid dephosphorylation|0046839||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545469.1;locus_tag=MSCD_RS03825;product=phosphatase PAP2 family protein;protein_id=WP_015545469.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	26993	28042	.	+	.	ID=gene-MSCD_RS03830;Name=MSCD_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03830;old_locus_tag=MSCd_6770
NZ_LAUX01000107.1	Protein Homology	CDS	26993	28042	.	+	0	ID=cds-WP_045596732.1;Parent=gene-MSCD_RS03830;Dbxref=GenBank:WP_045596732.1;Name=WP_045596732.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545280.1;locus_tag=MSCD_RS03830;product=ATP-binding protein;protein_id=WP_045596732.1;transl_table=4
NZ_LAUX01000107.1	RefSeq	gene	28032	30272	.	+	.	ID=gene-MSCD_RS03835;Name=MSCD_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03835;old_locus_tag=MSCd_6780
NZ_LAUX01000107.1	Protein Homology	CDS	28032	30272	.	+	0	ID=cds-WP_045596728.1;Parent=gene-MSCD_RS03835;Dbxref=GenBank:WP_045596728.1;Name=WP_045596728.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167180.1;locus_tag=MSCD_RS03835;product=S8 family peptidase;protein_id=WP_045596728.1;transl_table=4
##sequence-region NZ_LAUX01000108.1 1 16408
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000108.1	RefSeq	region	1	16408	.	+	.	ID=NZ_LAUX01000108.1:1..16408;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000108.1	RefSeq	gene	147	431	.	-	.	ID=gene-MSCD_RS04945;Name=MSCD_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04945
NZ_LAUX01000108.1	GeneMarkS-2+	CDS	147	431	.	-	0	ID=cds-WP_015545255.1;Parent=gene-MSCD_RS04945;Dbxref=GenBank:WP_015545255.1;Name=WP_015545255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS04945;product=hypothetical protein;protein_id=WP_015545255.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	448	657	.	+	.	ID=gene-MSCD_RS03850;Name=MSCD_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03850
NZ_LAUX01000108.1	Protein Homology	CDS	448	657	.	+	0	ID=cds-WP_011167171.1;Parent=gene-MSCD_RS03850;Dbxref=GenBank:WP_011167171.1;Name=WP_011167171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167171.1;locus_tag=MSCD_RS03850;product=hypothetical protein;protein_id=WP_011167171.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	973	1431	.	+	.	ID=gene-MSCD_RS03855;Name=MSCD_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03855;old_locus_tag=MSCd_6790
NZ_LAUX01000108.1	Protein Homology	CDS	973	1431	.	+	0	ID=cds-WP_011167170.1;Parent=gene-MSCD_RS03855;Dbxref=GenBank:WP_011167170.1;Name=WP_011167170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167170.1;locus_tag=MSCD_RS03855;product=hypothetical protein;protein_id=WP_011167170.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	1501	2919	.	+	.	ID=gene-MSCD_RS03860;Name=MSCD_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03860;old_locus_tag=MSCd_6800
NZ_LAUX01000108.1	Protein Homology	CDS	1501	2919	.	+	0	ID=cds-WP_045596725.1;Parent=gene-MSCD_RS03860;Dbxref=GenBank:WP_045596725.1;Name=WP_045596725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055091.1;locus_tag=MSCD_RS03860;product=helix-rich protein;protein_id=WP_045596725.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	2929	3705	.	+	.	ID=gene-MSCD_RS04790;Name=MSCD_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04790;old_locus_tag=MSCd_6810
NZ_LAUX01000108.1	Protein Homology	CDS	2929	3705	.	+	0	ID=cds-WP_011167168.1;Parent=gene-MSCD_RS04790;Dbxref=GenBank:WP_011167168.1;Name=WP_011167168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167168.1;locus_tag=MSCD_RS04790;product=helix-rich protein;protein_id=WP_011167168.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	pseudogene	3863	3979	.	+	.	ID=gene-MSCD_RS05520;Name=MSCD_RS05520;end_range=3979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05520;partial=true;pseudo=true
NZ_LAUX01000108.1	Protein Homology	CDS	3863	3979	.	+	0	ID=cds-MSCD_RS05520;Parent=gene-MSCD_RS05520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3979,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014757.7;locus_tag=MSCD_RS05520;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	4157	4450	.	+	.	ID=gene-MSCD_RS05525;Name=MSCD_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05525;old_locus_tag=MSCd_6820
NZ_LAUX01000108.1	Protein Homology	CDS	4157	4450	.	+	0	ID=cds-WP_011167167.1;Parent=gene-MSCD_RS05525;Dbxref=GenBank:WP_011167167.1;Name=WP_011167167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167167.1;locus_tag=MSCD_RS05525;product=hypothetical protein;protein_id=WP_011167167.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	4681	4899	.	+	.	ID=gene-MSCD_RS04805;Name=MSCD_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04805;old_locus_tag=MSCd_6830
NZ_LAUX01000108.1	Protein Homology	CDS	4681	4899	.	+	0	ID=cds-WP_011167166.1;Parent=gene-MSCD_RS04805;Dbxref=GenBank:WP_011167166.1;Name=WP_011167166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167166.1;locus_tag=MSCD_RS04805;product=hypothetical protein;protein_id=WP_011167166.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	5287	5721	.	-	.	ID=gene-MSCD_RS05530;Name=MSCD_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05530;old_locus_tag=MSCd_6850
NZ_LAUX01000108.1	Protein Homology	CDS	5287	5721	.	-	0	ID=cds-WP_015545342.1;Parent=gene-MSCD_RS05530;Dbxref=GenBank:WP_015545342.1;Name=WP_015545342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545342.1;locus_tag=MSCD_RS05530;product=hypothetical protein;protein_id=WP_015545342.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	6048	7385	.	-	.	ID=gene-MSCD_RS03875;Name=MSCD_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03875;old_locus_tag=MSCd_6860
NZ_LAUX01000108.1	Protein Homology	CDS	6048	7385	.	-	0	ID=cds-WP_011167164.1;Parent=gene-MSCD_RS03875;Dbxref=GenBank:WP_011167164.1;Name=WP_011167164.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729989.1;locus_tag=MSCD_RS03875;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011167164.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	7578	8078	.	-	.	ID=gene-MSCD_RS03880;Name=MSCD_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03880;old_locus_tag=MSCd_6870
NZ_LAUX01000108.1	Protein Homology	CDS	7578	8078	.	-	0	ID=cds-WP_011167163.1;Parent=gene-MSCD_RS03880;Dbxref=GenBank:WP_011167163.1;Name=WP_011167163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698129.1;locus_tag=MSCD_RS03880;product=isochorismatase family protein;protein_id=WP_011167163.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	8270	9613	.	+	.	ID=gene-MSCD_RS03885;Name=MSCD_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03885;old_locus_tag=MSCd_6880
NZ_LAUX01000108.1	Protein Homology	CDS	8270	9613	.	+	0	ID=cds-WP_015545454.1;Parent=gene-MSCD_RS03885;Dbxref=GenBank:WP_015545454.1;Name=WP_015545454.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698128.1;locus_tag=MSCD_RS03885;product=CoA-disulfide reductase;protein_id=WP_015545454.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	9633	11207	.	+	.	ID=gene-MSCD_RS03890;Name=MSCD_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03890;old_locus_tag=MSCd_6890
NZ_LAUX01000108.1	Protein Homology	CDS	9633	11207	.	+	0	ID=cds-WP_107682121.1;Parent=gene-MSCD_RS03890;Dbxref=GenBank:WP_107682121.1;Name=WP_107682121.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729985.1;locus_tag=MSCD_RS03890;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_107682121.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	11358	13247	.	+	.	ID=gene-MSCD_RS03895;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=MSCD_RS03895;old_locus_tag=MSCd_6900
NZ_LAUX01000108.1	Protein Homology	CDS	11358	13247	.	+	0	ID=cds-WP_015545387.1;Parent=gene-MSCD_RS03895;Dbxref=GenBank:WP_015545387.1;Name=WP_015545387.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167160.1;locus_tag=MSCD_RS03895;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_015545387.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	13509	14270	.	-	.	ID=gene-MSCD_RS03900;Name=MSCD_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03900;old_locus_tag=MSCd_6920
NZ_LAUX01000108.1	Protein Homology	CDS	13509	14270	.	-	0	ID=cds-WP_011167159.1;Parent=gene-MSCD_RS03900;Dbxref=GenBank:WP_011167159.1;Name=WP_011167159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167159.1;locus_tag=MSCD_RS03900;product=DUF3800 domain-containing protein;protein_id=WP_011167159.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	14475	15455	.	+	.	ID=gene-MSCD_RS03905;Name=MSCD_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03905;old_locus_tag=MSCd_6930
NZ_LAUX01000108.1	Protein Homology	CDS	14475	15455	.	+	0	ID=cds-WP_011167158.1;Parent=gene-MSCD_RS03905;Dbxref=GenBank:WP_011167158.1;Name=WP_011167158.1;Ontology_term=GO:0070981,GO:0004071,GO:0005524;gbkey=CDS;go_function=aspartate-ammonia ligase activity|0004071||IEA,ATP binding|0005524||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363077.1;locus_tag=MSCD_RS03905;product=aspartate--ammonia ligase;protein_id=WP_011167158.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	15512	15661	.	+	.	ID=gene-MSCD_RS03910;Name=MSCD_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03910
NZ_LAUX01000108.1	Protein Homology	CDS	15512	15661	.	+	0	ID=cds-WP_011167157.1;Parent=gene-MSCD_RS03910;Dbxref=GenBank:WP_011167157.1;Name=WP_011167157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167157.1;locus_tag=MSCD_RS03910;product=hypothetical protein;protein_id=WP_011167157.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	15661	15918	.	+	.	ID=gene-MSCD_RS03915;Name=MSCD_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03915;old_locus_tag=MSCd_6940
NZ_LAUX01000108.1	Protein Homology	CDS	15661	15918	.	+	0	ID=cds-WP_011167156.1;Parent=gene-MSCD_RS03915;Dbxref=GenBank:WP_011167156.1;Name=WP_011167156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167156.1;locus_tag=MSCD_RS03915;product=hypothetical protein;protein_id=WP_011167156.1;transl_table=4
NZ_LAUX01000108.1	RefSeq	gene	15950	16120	.	+	.	ID=gene-MSCD_RS03920;Name=MSCD_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03920
NZ_LAUX01000108.1	Protein Homology	CDS	15950	16120	.	+	0	ID=cds-WP_015545543.1;Parent=gene-MSCD_RS03920;Dbxref=GenBank:WP_015545543.1;Name=WP_015545543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545543.1;locus_tag=MSCD_RS03920;product=hypothetical protein;protein_id=WP_015545543.1;transl_table=4
##sequence-region NZ_LAUX01000109.1 1 11214
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000109.1	RefSeq	region	1	11214	.	+	.	ID=NZ_LAUX01000109.1:1..11214;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000109.1	RefSeq	gene	98	3865	.	-	.	ID=gene-MSCD_RS03925;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=MSCD_RS03925;old_locus_tag=MSCd_6950
NZ_LAUX01000109.1	Protein Homology	CDS	98	3865	.	-	0	ID=cds-WP_107682122.1;Parent=gene-MSCD_RS03925;Dbxref=GenBank:WP_107682122.1;Name=WP_107682122.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386971.1;locus_tag=MSCD_RS03925;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_107682122.1;transl_table=4
NZ_LAUX01000109.1	RefSeq	gene	3877	7752	.	-	.	ID=gene-MSCD_RS03930;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=MSCD_RS03930;old_locus_tag=MSCd_6960
NZ_LAUX01000109.1	Protein Homology	CDS	3877	7752	.	-	0	ID=cds-WP_107682123.1;Parent=gene-MSCD_RS03930;Dbxref=GenBank:WP_107682123.1;Name=WP_107682123.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862998.1;locus_tag=MSCD_RS03930;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_107682123.1;transl_table=4
NZ_LAUX01000109.1	RefSeq	gene	7742	8917	.	-	.	ID=gene-MSCD_RS03935;Name=MSCD_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03935;old_locus_tag=MSCd_6970
NZ_LAUX01000109.1	Protein Homology	CDS	7742	8917	.	-	0	ID=cds-WP_015545323.1;Parent=gene-MSCD_RS03935;Dbxref=GenBank:WP_015545323.1;Name=WP_015545323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363028.1;locus_tag=MSCD_RS03935;product=hypothetical protein;protein_id=WP_015545323.1;transl_table=4
NZ_LAUX01000109.1	RefSeq	gene	9088	9456	.	-	.	ID=gene-MSCD_RS03940;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=MSCD_RS03940;old_locus_tag=MSCd_6980
NZ_LAUX01000109.1	Protein Homology	CDS	9088	9456	.	-	0	ID=cds-WP_011167151.1;Parent=gene-MSCD_RS03940;Dbxref=GenBank:WP_011167151.1;Name=WP_011167151.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269103.1;locus_tag=MSCD_RS03940;product=50S ribosomal protein L7/L12;protein_id=WP_011167151.1;transl_table=4
NZ_LAUX01000109.1	RefSeq	gene	9525	10022	.	-	.	ID=gene-MSCD_RS03945;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=MSCD_RS03945;old_locus_tag=MSCd_6990
NZ_LAUX01000109.1	Protein Homology	CDS	9525	10022	.	-	0	ID=cds-WP_011167150.1;Parent=gene-MSCD_RS03945;Dbxref=GenBank:WP_011167150.1;Name=WP_011167150.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729912.1;locus_tag=MSCD_RS03945;product=50S ribosomal protein L10;protein_id=WP_011167150.1;transl_table=4
NZ_LAUX01000109.1	cmsearch	sequence_feature	10041	10179	.	-	.	ID=id-NZ_LAUX01000109.1:10041..10179;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_LAUX01000109.1	RefSeq	gene	10344	11214	.	-	.	ID=gene-MSCD_RS03950;Name=MSCD_RS03950;end_range=11214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03950;partial=true
NZ_LAUX01000109.1	Protein Homology	CDS	10344	11214	.	-	1	ID=cds-WP_258176379.1;Parent=gene-MSCD_RS03950;Dbxref=GenBank:WP_258176379.1;Name=WP_258176379.1;Ontology_term=GO:0005515;end_range=11214,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167149.1;locus_tag=MSCD_RS03950;partial=true;product=BspA family leucine-rich repeat surface protein;protein_id=WP_258176379.1;transl_table=4
##sequence-region NZ_LAUX01000110.1 1 5820
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000110.1	RefSeq	region	1	5820	.	+	.	ID=NZ_LAUX01000110.1:1..5820;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000110.1	RefSeq	gene	1	171	.	-	.	ID=gene-MSCD_RS03955;Name=MSCD_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03955;partial=true;start_range=.,1
NZ_LAUX01000110.1	Protein Homology	CDS	1	171	.	-	0	ID=cds-WP_107682124.1;Parent=gene-MSCD_RS03955;Dbxref=GenBank:WP_107682124.1;Name=WP_107682124.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF038029.1;locus_tag=MSCD_RS03955;partial=true;product=lipoprotein;protein_id=WP_107682124.1;start_range=.,1;transl_table=4
NZ_LAUX01000110.1	RefSeq	pseudogene	287	1694	.	-	.	ID=gene-MSCD_RS03960;Name=MSCD_RS03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS03960;pseudo=true
NZ_LAUX01000110.1	Protein Homology	CDS	287	1694	.	-	0	ID=cds-MSCD_RS03960;Parent=gene-MSCD_RS03960;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=MSCD_RS03960;product=IS3 family transposase;pseudo=true;transl_table=4
NZ_LAUX01000110.1	RefSeq	gene	1847	2533	.	-	.	ID=gene-MSCD_RS05020;Name=MSCD_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05020;old_locus_tag=MSCd_7030
NZ_LAUX01000110.1	GeneMarkS-2+	CDS	1847	2533	.	-	0	ID=cds-WP_107682125.1;Parent=gene-MSCD_RS05020;Dbxref=GenBank:WP_107682125.1;Name=WP_107682125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05020;product=hypothetical protein;protein_id=WP_107682125.1;transl_table=4
NZ_LAUX01000110.1	RefSeq	gene	2690	3652	.	-	.	ID=gene-MSCD_RS03970;Name=MSCD_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03970;old_locus_tag=MSCd_7040
NZ_LAUX01000110.1	Protein Homology	CDS	2690	3652	.	-	0	ID=cds-WP_230592189.1;Parent=gene-MSCD_RS03970;Dbxref=GenBank:WP_230592189.1;Name=WP_230592189.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545452.1;locus_tag=MSCD_RS03970;product=transglutaminase domain-containing protein;protein_id=WP_230592189.1;transl_table=4
NZ_LAUX01000110.1	RefSeq	gene	3787	3960	.	-	.	ID=gene-MSCD_RS03975;Name=MSCD_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03975
NZ_LAUX01000110.1	Protein Homology	CDS	3787	3960	.	-	0	ID=cds-WP_011167142.1;Parent=gene-MSCD_RS03975;Dbxref=GenBank:WP_011167142.1;Name=WP_011167142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167142.1;locus_tag=MSCD_RS03975;product=hypothetical protein;protein_id=WP_011167142.1;transl_table=4
NZ_LAUX01000110.1	RefSeq	gene	4323	5003	.	-	.	ID=gene-MSCD_RS03980;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=MSCD_RS03980;old_locus_tag=MSCd_7050
NZ_LAUX01000110.1	Protein Homology	CDS	4323	5003	.	-	0	ID=cds-WP_015545311.1;Parent=gene-MSCD_RS03980;Dbxref=GenBank:WP_015545311.1;Name=WP_015545311.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386966.1;locus_tag=MSCD_RS03980;product=50S ribosomal protein L1;protein_id=WP_015545311.1;transl_table=4
NZ_LAUX01000110.1	RefSeq	gene	5003	5431	.	-	.	ID=gene-MSCD_RS03985;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=MSCD_RS03985;old_locus_tag=MSCd_7060
NZ_LAUX01000110.1	Protein Homology	CDS	5003	5431	.	-	0	ID=cds-WP_011167140.1;Parent=gene-MSCD_RS03985;Dbxref=GenBank:WP_011167140.1;Name=WP_011167140.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447424.1;locus_tag=MSCD_RS03985;product=50S ribosomal protein L11;protein_id=WP_011167140.1;transl_table=4
##sequence-region NZ_LAUX01000135.1 1 1327
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000135.1	RefSeq	region	1	1327	.	+	.	ID=NZ_LAUX01000135.1:1..1327;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000135.1	RefSeq	pseudogene	52	1327	.	+	.	ID=gene-MSCD_RS04505;Name=MSCD_RS04505;end_range=1327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04505;old_locus_tag=MSCd_7870;partial=true;pseudo=true
NZ_LAUX01000135.1	Protein Homology	CDS	52	1327	.	+	0	ID=cds-MSCD_RS04505;Parent=gene-MSCD_RS04505;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448011.1;locus_tag=MSCD_RS04505;partial=true;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000002.1 1 2100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000002.1	RefSeq	region	1	2100	.	+	.	ID=NZ_LAUX01000002.1:1..2100;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000002.1	RefSeq	gene	1	1075	.	+	.	ID=gene-MSCD_RS00015;Name=MSCD_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00015;partial=true;start_range=.,1
NZ_LAUX01000002.1	Protein Homology	CDS	1	1075	.	+	1	ID=cds-WP_498049556.1;Parent=gene-MSCD_RS00015;Dbxref=GenBank:WP_498049556.1;Name=WP_498049556.1;Ontology_term=GO:0008643,GO:0009401,GO:0022857,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698397.1;locus_tag=MSCD_RS00015;partial=true;product=PTS sugar transporter subunit IIC;protein_id=WP_498049556.1;start_range=.,1;transl_table=4
NZ_LAUX01000002.1	RefSeq	gene	1088	1462	.	+	.	ID=gene-MSCD_RS05055;Name=MSCD_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05055;old_locus_tag=MSCd_0030
NZ_LAUX01000002.1	GeneMarkS-2+	CDS	1088	1462	.	+	0	ID=cds-WP_011166821.1;Parent=gene-MSCD_RS05055;Dbxref=GenBank:WP_011166821.1;Name=WP_011166821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05055;product=carbohydrate kinase family protein;protein_id=WP_011166821.1;transl_table=4
NZ_LAUX01000002.1	RefSeq	gene	1467	2030	.	+	.	ID=gene-MSCD_RS05060;Name=MSCD_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05060;old_locus_tag=MSCd_0040
NZ_LAUX01000002.1	Protein Homology	CDS	1467	2030	.	+	0	ID=cds-WP_015545589.1;Parent=gene-MSCD_RS05060;Dbxref=GenBank:WP_015545589.1;Name=WP_015545589.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012515.7;locus_tag=MSCD_RS05060;product=1-phosphofructokinase family hexose kinase;protein_id=WP_015545589.1;transl_table=4
##sequence-region NZ_LAUX01000003.1 1 2908
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000003.1	RefSeq	region	1	2908	.	+	.	ID=NZ_LAUX01000003.1:1..2908;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000003.1	RefSeq	pseudogene	1	211	.	-	.	ID=gene-MSCD_RS05815;Name=MSCD_RS05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05815;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000003.1	GeneMarkS-2+	CDS	1	211	.	-	0	ID=cds-MSCD_RS05815;Parent=gene-MSCD_RS05815;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05815;partial=true;product=DUF2130 domain-containing protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000003.1	RefSeq	gene	1129	2908	.	+	.	ID=gene-MSCD_RS00040;Name=MSCD_RS00040;end_range=2908,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00040;partial=true
NZ_LAUX01000003.1	Protein Homology	CDS	1129	2908	.	+	0	ID=cds-WP_107682058.1;Parent=gene-MSCD_RS00040;Dbxref=GenBank:WP_107682058.1;Name=WP_107682058.1;end_range=2908,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729725.1;locus_tag=MSCD_RS00040;partial=true;product=DUF4011 domain-containing protein;protein_id=WP_107682058.1;transl_table=4
##sequence-region NZ_LAUX01000111.1 1 1695
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000111.1	RefSeq	region	1	1695	.	+	.	ID=NZ_LAUX01000111.1:1..1695;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000111.1	RefSeq	gene	1	1695	.	+	.	ID=gene-MSCD_RS03990;Name=MSCD_RS03990;end_range=1695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS03990;partial=true;start_range=.,1
NZ_LAUX01000111.1	Protein Homology	CDS	1	1695	.	+	1	ID=cds-WP_107682126.1;Parent=gene-MSCD_RS03990;Dbxref=GenBank:WP_107682126.1;Name=WP_107682126.1;Ontology_term=GO:0055085,GO:0016020;end_range=1695,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862930.1;locus_tag=MSCD_RS03990;partial=true;product=ABC transporter permease subunit;protein_id=WP_107682126.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000112.1 1 1916
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000112.1	RefSeq	region	1	1916	.	+	.	ID=NZ_LAUX01000112.1:1..1916;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000112.1	RefSeq	gene	1	1203	.	+	.	ID=gene-MSCD_RS03995;Name=cypl;gbkey=Gene;gene=cypl;gene_biotype=protein_coding;locus_tag=MSCD_RS03995;partial=true;start_range=.,1
NZ_LAUX01000112.1	Protein Homology	CDS	1	1203	.	+	0	ID=cds-WP_107326330.1;Parent=gene-MSCD_RS03995;Dbxref=GenBank:WP_107326330.1;Name=WP_107326330.1;Ontology_term=GO:0030976,GO:0009897;gbkey=CDS;gene=cypl;go_component=external side of plasma membrane|0009897||IEA;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166956.1;locus_tag=MSCD_RS03995;partial=true;product=ABC transporter thiamine pyrophosphate-binding lipoprotein p37/Cypl;protein_id=WP_107326330.1;start_range=.,1;transl_table=4
NZ_LAUX01000112.1	RefSeq	gene	1214	1916	.	+	.	ID=gene-MSCD_RS04000;Name=MSCD_RS04000;end_range=1916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04000;partial=true
NZ_LAUX01000112.1	Protein Homology	CDS	1214	1916	.	+	0	ID=cds-WP_107682127.1;Parent=gene-MSCD_RS04000;Dbxref=GenBank:WP_107682127.1;Name=WP_107682127.1;Ontology_term=GO:0005524,GO:0015416,GO:0016887,GO:0042626,GO:0140359,GO:0005886;end_range=1916,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729833.1;locus_tag=MSCD_RS04000;partial=true;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_107682127.1;transl_table=4
##sequence-region NZ_LAUX01000113.1 1 2121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000113.1	RefSeq	region	1	2121	.	+	.	ID=NZ_LAUX01000113.1:1..2121;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000113.1	RefSeq	pseudogene	1	1977	.	+	.	ID=gene-MSCD_RS04005;Name=MSCD_RS04005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04005;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000113.1	Protein Homology	CDS	1	1977	.	+	1	ID=cds-MSCD_RS04005;Parent=gene-MSCD_RS04005;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387571.1;locus_tag=MSCD_RS04005;partial=true;product=MSC_0775 family lipoprotein;pseudo=true;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000114.1 1 2793
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000114.1	RefSeq	region	1	2793	.	+	.	ID=NZ_LAUX01000114.1:1..2793;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000114.1	RefSeq	gene	1	600	.	+	.	ID=gene-MSCD_RS04010;Name=MSCD_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04010;partial=true;start_range=.,1
NZ_LAUX01000114.1	Protein Homology	CDS	1	600	.	+	0	ID=cds-WP_181256865.1;Parent=gene-MSCD_RS04010;Dbxref=GenBank:WP_181256865.1;Name=WP_181256865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862522.1;locus_tag=MSCD_RS04010;partial=true;product=glutamine amidotransferase-related protein;protein_id=WP_181256865.1;start_range=.,1;transl_table=4
NZ_LAUX01000114.1	RefSeq	pseudogene	834	1795	.	+	.	ID=gene-MSCD_RS04015;Name=MSCD_RS04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04015;old_locus_tag=MSCd_7080;pseudo=true
NZ_LAUX01000114.1	Protein Homology	CDS	834	1795	.	+	0	ID=cds-MSCD_RS04015;Parent=gene-MSCD_RS04015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167052.1;locus_tag=MSCD_RS04015;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
NZ_LAUX01000114.1	RefSeq	gene	1810	2778	.	+	.	ID=gene-MSCD_RS04020;Name=MSCD_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04020;old_locus_tag=MSCd_7090
NZ_LAUX01000114.1	Protein Homology	CDS	1810	2778	.	+	0	ID=cds-WP_011166340.1;Parent=gene-MSCD_RS04020;Dbxref=GenBank:WP_011166340.1;Name=WP_011166340.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166340.1;locus_tag=MSCD_RS04020;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166340.1;transl_table=4
##sequence-region NZ_LAUX01000115.1 1 11210
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000115.1	RefSeq	region	1	11210	.	+	.	ID=NZ_LAUX01000115.1:1..11210;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000115.1	RefSeq	pseudogene	1	1296	.	+	.	ID=gene-MSCD_RS04025;Name=MSCD_RS04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04025;old_locus_tag=MSCd_7100;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000115.1	Protein Homology	CDS	1	1296	.	+	0	ID=cds-MSCD_RS04025;Parent=gene-MSCD_RS04025;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167050.1;locus_tag=MSCD_RS04025;partial=true;product=MAG2960 family serine endopeptidase lipoprotein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	1305	1601	.	-	.	ID=gene-MSCD_RS04030;Name=MSCD_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04030;old_locus_tag=MSCd_7110
NZ_LAUX01000115.1	Protein Homology	CDS	1305	1601	.	-	0	ID=cds-WP_011167049.1;Parent=gene-MSCD_RS04030;Dbxref=GenBank:WP_011167049.1;Name=WP_011167049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729906.1;locus_tag=MSCD_RS04030;product=rhodanese-like domain-containing protein;protein_id=WP_011167049.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	1680	2123	.	+	.	ID=gene-MSCD_RS04035;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=MSCD_RS04035;old_locus_tag=MSCd_7120
NZ_LAUX01000115.1	Protein Homology	CDS	1680	2123	.	+	0	ID=cds-WP_015545390.1;Parent=gene-MSCD_RS04035;Dbxref=GenBank:WP_015545390.1;Name=WP_015545390.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862995.1;locus_tag=MSCD_RS04035;product=ribose 5-phosphate isomerase B;protein_id=WP_015545390.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	2107	3348	.	+	.	ID=gene-MSCD_RS04040;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=MSCD_RS04040;old_locus_tag=MSCd_7130
NZ_LAUX01000115.1	Protein Homology	CDS	2107	3348	.	+	0	ID=cds-WP_011167047.1;Parent=gene-MSCD_RS04040;Dbxref=GenBank:WP_011167047.1;Name=WP_011167047.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447441.1;locus_tag=MSCD_RS04040;product=serine hydroxymethyltransferase;protein_id=WP_011167047.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	3448	4071	.	+	.	ID=gene-MSCD_RS04045;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=MSCD_RS04045;old_locus_tag=MSCd_7140
NZ_LAUX01000115.1	Protein Homology	CDS	3448	4071	.	+	0	ID=cds-WP_015545345.1;Parent=gene-MSCD_RS04045;Dbxref=GenBank:WP_015545345.1;Name=WP_015545345.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183004.1;locus_tag=MSCD_RS04045;product=uracil phosphoribosyltransferase;protein_id=WP_015545345.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	4212	4592	.	+	.	ID=gene-MSCD_RS04050;Name=MSCD_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04050;old_locus_tag=MSCd_7150
NZ_LAUX01000115.1	Protein Homology	CDS	4212	4592	.	+	0	ID=cds-WP_011167045.1;Parent=gene-MSCD_RS04050;Dbxref=GenBank:WP_011167045.1;Name=WP_011167045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033688.1;locus_tag=MSCD_RS04050;product=MG406 family protein;protein_id=WP_011167045.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	4610	5473	.	+	.	ID=gene-MSCD_RS04055;Name=MSCD_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04055;old_locus_tag=MSCd_7160
NZ_LAUX01000115.1	Protein Homology	CDS	4610	5473	.	+	0	ID=cds-WP_011167044.1;Parent=gene-MSCD_RS04055;Dbxref=GenBank:WP_011167044.1;Name=WP_011167044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167044.1;locus_tag=MSCD_RS04055;product=F0F1 ATP synthase subunit A;protein_id=WP_011167044.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	5503	5808	.	+	.	ID=gene-MSCD_RS04060;Name=MSCD_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04060;old_locus_tag=MSCd_7170
NZ_LAUX01000115.1	Protein Homology	CDS	5503	5808	.	+	0	ID=cds-WP_011167043.1;Parent=gene-MSCD_RS04060;Dbxref=GenBank:WP_011167043.1;Name=WP_011167043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862992.1;locus_tag=MSCD_RS04060;product=ATP synthase subunit C;protein_id=WP_011167043.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	5837	6382	.	+	.	ID=gene-MSCD_RS04065;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=MSCD_RS04065;old_locus_tag=MSCd_7180
NZ_LAUX01000115.1	Protein Homology	CDS	5837	6382	.	+	0	ID=cds-WP_107682128.1;Parent=gene-MSCD_RS04065;Dbxref=GenBank:WP_107682128.1;Name=WP_107682128.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167042.1;locus_tag=MSCD_RS04065;product=F0F1 ATP synthase subunit B;protein_id=WP_107682128.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	6384	6929	.	+	.	ID=gene-MSCD_RS04070;Name=MSCD_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04070;old_locus_tag=MSCd_7190
NZ_LAUX01000115.1	Protein Homology	CDS	6384	6929	.	+	0	ID=cds-WP_011167041.1;Parent=gene-MSCD_RS04070;Dbxref=GenBank:WP_011167041.1;Name=WP_011167041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167041.1;locus_tag=MSCD_RS04070;product=F0F1 ATP synthase subunit delta;protein_id=WP_011167041.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	6941	8518	.	+	.	ID=gene-MSCD_RS04075;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=MSCD_RS04075;old_locus_tag=MSCd_7200
NZ_LAUX01000115.1	Protein Homology	CDS	6941	8518	.	+	0	ID=cds-WP_015545272.1;Parent=gene-MSCD_RS04075;Dbxref=GenBank:WP_015545272.1;Name=WP_015545272.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545272.1;locus_tag=MSCD_RS04075;product=F0F1 ATP synthase subunit alpha;protein_id=WP_015545272.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	8520	9362	.	+	.	ID=gene-MSCD_RS04080;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=MSCD_RS04080;old_locus_tag=MSCd_7210
NZ_LAUX01000115.1	Protein Homology	CDS	8520	9362	.	+	0	ID=cds-WP_015545588.1;Parent=gene-MSCD_RS04080;Dbxref=GenBank:WP_015545588.1;Name=WP_015545588.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698248.1;locus_tag=MSCD_RS04080;product=ATP synthase F1 subunit gamma;protein_id=WP_015545588.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	9371	10798	.	+	.	ID=gene-MSCD_RS04085;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=MSCD_RS04085;old_locus_tag=MSCd_7220
NZ_LAUX01000115.1	Protein Homology	CDS	9371	10798	.	+	0	ID=cds-WP_015545389.1;Parent=gene-MSCD_RS04085;Dbxref=GenBank:WP_015545389.1;Name=WP_015545389.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167038.1;locus_tag=MSCD_RS04085;product=F0F1 ATP synthase subunit beta;protein_id=WP_015545389.1;transl_table=4
NZ_LAUX01000115.1	RefSeq	gene	10798	11097	.	+	.	ID=gene-MSCD_RS04090;Name=MSCD_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04090;old_locus_tag=MSCd_7230
NZ_LAUX01000115.1	Protein Homology	CDS	10798	11097	.	+	0	ID=cds-WP_011167037.1;Parent=gene-MSCD_RS04090;Dbxref=GenBank:WP_011167037.1;Name=WP_011167037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167037.1;locus_tag=MSCD_RS04090;product=hypothetical protein;protein_id=WP_011167037.1;transl_table=4
##sequence-region NZ_LAUX01000116.1 1 6204
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000116.1	RefSeq	region	1	6204	.	+	.	ID=NZ_LAUX01000116.1:1..6204;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000116.1	RefSeq	gene	1	1109	.	-	.	ID=gene-MSCD_RS04095;Name=MSCD_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04095;partial=true;start_range=.,1
NZ_LAUX01000116.1	Protein Homology	CDS	1	1109	.	-	0	ID=cds-WP_181256866.1;Parent=gene-MSCD_RS04095;Dbxref=GenBank:WP_181256866.1;Name=WP_181256866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545271.1;locus_tag=MSCD_RS04095;partial=true;product=MSC_0882 family membrane protein;protein_id=WP_181256866.1;start_range=.,1;transl_table=4
NZ_LAUX01000116.1	RefSeq	pseudogene	1431	4258	.	+	.	ID=gene-MSCD_RS04100;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=pseudogene;locus_tag=MSCD_RS04100;old_locus_tag=MSCd_7240;pseudo=true
NZ_LAUX01000116.1	Protein Homology	CDS	1431	4258	.	+	0	ID=cds-MSCD_RS04100;Parent=gene-MSCD_RS04100;Note=frameshifted;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269119.1;locus_tag=MSCD_RS04100;product=magnesium-translocating P-type ATPase;pseudo=true;transl_table=4
NZ_LAUX01000116.1	RefSeq	gene	4634	5029	.	+	.	ID=gene-MSCD_RS05025;Name=MSCD_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05025;old_locus_tag=MSCd_7260
NZ_LAUX01000116.1	Protein Homology	CDS	4634	5029	.	+	0	ID=cds-WP_230592210.1;Parent=gene-MSCD_RS05025;Dbxref=GenBank:WP_230592210.1;Name=WP_230592210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.7;locus_tag=MSCD_RS05025;product=hypothetical protein;protein_id=WP_230592210.1;transl_table=4
NZ_LAUX01000116.1	RefSeq	gene	5118	5282	.	+	.	ID=gene-MSCD_RS04110;Name=MSCD_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04110;old_locus_tag=MSCd_7270
NZ_LAUX01000116.1	Protein Homology	CDS	5118	5282	.	+	0	ID=cds-WP_011167021.1;Parent=gene-MSCD_RS04110;Dbxref=GenBank:WP_011167021.1;Name=WP_011167021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167021.1;locus_tag=MSCD_RS04110;product=hypothetical protein;protein_id=WP_011167021.1;transl_table=4
NZ_LAUX01000116.1	RefSeq	gene	5326	5649	.	+	.	ID=gene-MSCD_RS04115;Name=MSCD_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04115;old_locus_tag=MSCd_7280
NZ_LAUX01000116.1	Protein Homology	CDS	5326	5649	.	+	0	ID=cds-WP_011167033.1;Parent=gene-MSCD_RS04115;Dbxref=GenBank:WP_011167033.1;Name=WP_011167033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167033.1;locus_tag=MSCD_RS04115;product=membrane arginine transporter;protein_id=WP_011167033.1;transl_table=4
NZ_LAUX01000116.1	RefSeq	gene	5662	6204	.	+	.	ID=gene-MSCD_RS04120;Name=MSCD_RS04120;end_range=6204,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04120;partial=true
NZ_LAUX01000116.1	Protein Homology	CDS	5662	6204	.	+	0	ID=cds-WP_465100975.1;Parent=gene-MSCD_RS04120;Dbxref=GenBank:WP_465100975.1;Name=WP_465100975.1;end_range=6204,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862889.1;locus_tag=MSCD_RS04120;partial=true;product=amino acid kinase family protein;protein_id=WP_465100975.1;transl_table=4
##sequence-region NZ_LAUX01000117.1 1 3823
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000117.1	RefSeq	region	1	3823	.	+	.	ID=NZ_LAUX01000117.1:1..3823;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000117.1	RefSeq	pseudogene	144	1185	.	-	.	ID=gene-MSCD_RS04125;Name=MSCD_RS04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04125;old_locus_tag=MSCd_7290;pseudo=true
NZ_LAUX01000117.1	Protein Homology	CDS	144	1185	.	-	0	ID=cds-MSCD_RS04125;Parent=gene-MSCD_RS04125;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269123.1;locus_tag=MSCD_RS04125;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=4
NZ_LAUX01000117.1	RefSeq	gene	1280	1471	.	-	.	ID=gene-MSCD_RS05785;Name=MSCD_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05785
NZ_LAUX01000117.1	GeneMarkS-2+	CDS	1280	1471	.	-	0	ID=cds-WP_039275770.1;Parent=gene-MSCD_RS05785;Dbxref=GenBank:WP_039275770.1;Name=WP_039275770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05785;product=hypothetical protein;protein_id=WP_039275770.1;transl_table=4
NZ_LAUX01000117.1	RefSeq	gene	1449	3479	.	-	.	ID=gene-MSCD_RS04135;Name=MSCD_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04135;old_locus_tag=MSCd_7300
NZ_LAUX01000117.1	Protein Homology	CDS	1449	3479	.	-	0	ID=cds-WP_107682131.1;Parent=gene-MSCD_RS04135;Dbxref=GenBank:WP_107682131.1;Name=WP_107682131.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167016.1;locus_tag=MSCD_RS04135;product=PTS transporter subunit EIIC;protein_id=WP_107682131.1;transl_table=4
NZ_LAUX01000117.1	RefSeq	gene	3529	3823	.	-	.	ID=gene-MSCD_RS04140;Name=MSCD_RS04140;end_range=3823,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04140;old_locus_tag=MSCd_7310;partial=true
NZ_LAUX01000117.1	Protein Homology	CDS	3529	3823	.	-	1	ID=cds-WP_258176821.1;Parent=gene-MSCD_RS04140;Dbxref=GenBank:WP_258176821.1;Name=WP_258176821.1;end_range=3823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269124.1;locus_tag=MSCD_RS04140;partial=true;product=hypothetical protein;protein_id=WP_258176821.1;transl_table=4
##sequence-region NZ_LAUX01000118.1 1 7474
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000118.1	RefSeq	region	1	7474	.	+	.	ID=NZ_LAUX01000118.1:1..7474;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000118.1	RefSeq	gene	76	558	.	-	.	ID=gene-MSCD_RS04145;Name=MSCD_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04145;old_locus_tag=MSCd_7320
NZ_LAUX01000118.1	Protein Homology	CDS	76	558	.	-	0	ID=cds-WP_011167014.1;Parent=gene-MSCD_RS04145;Dbxref=GenBank:WP_011167014.1;Name=WP_011167014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862981.1;locus_tag=MSCD_RS04145;product=hypothetical protein;protein_id=WP_011167014.1;transl_table=4
NZ_LAUX01000118.1	RefSeq	gene	558	1004	.	-	.	ID=gene-MSCD_RS04150;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=MSCD_RS04150;old_locus_tag=MSCd_7330
NZ_LAUX01000118.1	Protein Homology	CDS	558	1004	.	-	0	ID=cds-WP_011167013.1;Parent=gene-MSCD_RS04150;Dbxref=GenBank:WP_011167013.1;Name=WP_011167013.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167013.1;locus_tag=MSCD_RS04150;product=SsrA-binding protein SmpB;protein_id=WP_011167013.1;transl_table=4
NZ_LAUX01000118.1	RefSeq	gene	1014	3128	.	-	.	ID=gene-MSCD_RS04155;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=MSCD_RS04155;old_locus_tag=MSCd_7340
NZ_LAUX01000118.1	Protein Homology	CDS	1014	3128	.	-	0	ID=cds-WP_107682132.1;Parent=gene-MSCD_RS04155;Dbxref=GenBank:WP_107682132.1;Name=WP_107682132.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862980.1;locus_tag=MSCD_RS04155;product=ribonuclease R;protein_id=WP_107682132.1;transl_table=4
NZ_LAUX01000118.1	RefSeq	gene	3164	3448	.	-	.	ID=gene-MSCD_RS04160;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=MSCD_RS04160;old_locus_tag=MSCd_7350
NZ_LAUX01000118.1	Protein Homology	CDS	3164	3448	.	-	0	ID=cds-WP_013729883.1;Parent=gene-MSCD_RS04160;Dbxref=GenBank:WP_013729883.1;Name=WP_013729883.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729883.1;locus_tag=MSCD_RS04160;product=preprotein translocase subunit SecG;protein_id=WP_013729883.1;transl_table=4
NZ_LAUX01000118.1	RefSeq	gene	3750	4769	.	+	.	ID=gene-MSCD_RS04165;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=MSCD_RS04165;old_locus_tag=MSCd_7360
NZ_LAUX01000118.1	Protein Homology	CDS	3750	4769	.	+	0	ID=cds-WP_011167011.1;Parent=gene-MSCD_RS04165;Dbxref=GenBank:WP_011167011.1;Name=WP_011167011.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269128.1;locus_tag=MSCD_RS04165;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_011167011.1;transl_table=4
NZ_LAUX01000118.1	RefSeq	gene	4778	5251	.	+	.	ID=gene-MSCD_RS04170;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=MSCD_RS04170;old_locus_tag=MSCd_7370
NZ_LAUX01000118.1	Protein Homology	CDS	4778	5251	.	+	0	ID=cds-WP_045596645.1;Parent=gene-MSCD_RS04170;Dbxref=GenBank:WP_045596645.1;Name=WP_045596645.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362672.1;locus_tag=MSCD_RS04170;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_045596645.1;transl_table=4
NZ_LAUX01000118.1	RefSeq	gene	5238	7400	.	+	.	ID=gene-MSCD_RS04175;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=MSCD_RS04175;old_locus_tag=MSCd_7380
NZ_LAUX01000118.1	Protein Homology	CDS	5238	7400	.	+	0	ID=cds-WP_181256867.1;Parent=gene-MSCD_RS04175;Dbxref=GenBank:WP_181256867.1;Name=WP_181256867.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447463.1;locus_tag=MSCD_RS04175;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_181256867.1;transl_table=4
##sequence-region NZ_LAUX01000119.1 1 8497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000119.1	RefSeq	region	1	8497	.	+	.	ID=NZ_LAUX01000119.1:1..8497;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000119.1	RefSeq	gene	162	1460	.	+	.	ID=gene-MSCD_RS04180;Name=MSCD_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04180;old_locus_tag=MSCd_7390
NZ_LAUX01000119.1	Protein Homology	CDS	162	1460	.	+	0	ID=cds-WP_011167008.1;Parent=gene-MSCD_RS04180;Dbxref=GenBank:WP_011167008.1;Name=WP_011167008.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167008.1;locus_tag=MSCD_RS04180;product=adenylosuccinate synthase;protein_id=WP_011167008.1;transl_table=4
NZ_LAUX01000119.1	RefSeq	gene	1453	2751	.	+	.	ID=gene-MSCD_RS04185;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=MSCD_RS04185;old_locus_tag=MSCd_7400
NZ_LAUX01000119.1	Protein Homology	CDS	1453	2751	.	+	0	ID=cds-WP_015545429.1;Parent=gene-MSCD_RS04185;Dbxref=GenBank:WP_015545429.1;Name=WP_015545429.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862972.1;locus_tag=MSCD_RS04185;product=adenylosuccinate lyase;protein_id=WP_015545429.1;transl_table=4
NZ_LAUX01000119.1	RefSeq	gene	2787	3338	.	+	.	ID=gene-MSCD_RS04190;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=MSCD_RS04190;old_locus_tag=MSCd_7410
NZ_LAUX01000119.1	Protein Homology	CDS	2787	3338	.	+	0	ID=cds-WP_011167006.1;Parent=gene-MSCD_RS04190;Dbxref=GenBank:WP_011167006.1;Name=WP_011167006.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269674.1;locus_tag=MSCD_RS04190;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011167006.1;transl_table=4
NZ_LAUX01000119.1	RefSeq	gene	3495	4268	.	+	.	ID=gene-MSCD_RS04195;Name=MSCD_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04195;old_locus_tag=MSCd_7420
NZ_LAUX01000119.1	Protein Homology	CDS	3495	4268	.	+	0	ID=cds-WP_011167005.1;Parent=gene-MSCD_RS04195;Dbxref=GenBank:WP_011167005.1;Name=WP_011167005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448121.1;locus_tag=MSCD_RS04195;product=hypothetical protein;protein_id=WP_011167005.1;transl_table=4
NZ_LAUX01000119.1	RefSeq	gene	4283	5068	.	+	.	ID=gene-MSCD_RS05540;Name=MSCD_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05540;old_locus_tag=MSCd_7430
NZ_LAUX01000119.1	Protein Homology	CDS	4283	5068	.	+	0	ID=cds-WP_258177041.1;Parent=gene-MSCD_RS05540;Dbxref=GenBank:WP_258177041.1;Name=WP_258177041.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF051954.2;locus_tag=MSCD_RS05540;product=fructose PTS transporter subunit IIB;protein_id=WP_258177041.1;transl_table=4
NZ_LAUX01000119.1	RefSeq	gene	5161	6123	.	+	.	ID=gene-MSCD_RS05545;Name=MSCD_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05545;old_locus_tag=MSCd_7440
NZ_LAUX01000119.1	GeneMarkS-2+	CDS	5161	6123	.	+	0	ID=cds-WP_258177042.1;Parent=gene-MSCD_RS05545;Dbxref=GenBank:WP_258177042.1;Name=WP_258177042.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05545;product=PTS transporter subunit EIIC;protein_id=WP_258177042.1;transl_table=4
NZ_LAUX01000119.1	RefSeq	gene	6135	8497	.	+	.	ID=gene-MSCD_RS04205;Name=MSCD_RS04205;end_range=8497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04205;partial=true
NZ_LAUX01000119.1	Protein Homology	CDS	6135	8497	.	+	0	ID=cds-WP_107682134.1;Parent=gene-MSCD_RS04205;Dbxref=GenBank:WP_107682134.1;Name=WP_107682134.1;Ontology_term=GO:0006013,GO:0004559;end_range=8497,.;gbkey=CDS;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698271.1;locus_tag=MSCD_RS04205;partial=true;product=glycoside hydrolase family 38 N-terminal domain-containing protein;protein_id=WP_107682134.1;transl_table=4
##sequence-region NZ_LAUX01000120.1 1 6334
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000120.1	RefSeq	region	1	6334	.	+	.	ID=NZ_LAUX01000120.1:1..6334;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000120.1	RefSeq	gene	1	320	.	+	.	ID=gene-MSCD_RS04210;Name=MSCD_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04210;partial=true;start_range=.,1
NZ_LAUX01000120.1	Protein Homology	CDS	1	320	.	+	2	ID=cds-WP_258177043.1;Parent=gene-MSCD_RS04210;Dbxref=GenBank:WP_258177043.1;Name=WP_258177043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698271.1;locus_tag=MSCD_RS04210;partial=true;product=glycosyl hydrolase-related protein;protein_id=WP_258177043.1;start_range=.,1;transl_table=4
NZ_LAUX01000120.1	RefSeq	gene	329	787	.	+	.	ID=gene-MSCD_RS04215;Name=MSCD_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04215;old_locus_tag=MSCd_7450
NZ_LAUX01000120.1	Protein Homology	CDS	329	787	.	+	0	ID=cds-WP_011167001.1;Parent=gene-MSCD_RS04215;Dbxref=GenBank:WP_011167001.1;Name=WP_011167001.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584604.1;locus_tag=MSCD_RS04215;product=PTS sugar transporter subunit IIA;protein_id=WP_011167001.1;transl_table=4
NZ_LAUX01000120.1	RefSeq	gene	789	1667	.	+	.	ID=gene-MSCD_RS04220;Name=MSCD_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04220;old_locus_tag=MSCd_7460
NZ_LAUX01000120.1	Protein Homology	CDS	789	1667	.	+	0	ID=cds-WP_181256868.1;Parent=gene-MSCD_RS04220;Dbxref=GenBank:WP_181256868.1;Name=WP_181256868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729869.1;locus_tag=MSCD_RS04220;product=ROK family protein;protein_id=WP_181256868.1;transl_table=4
NZ_LAUX01000120.1	RefSeq	gene	1660	3048	.	+	.	ID=gene-MSCD_RS04225;Name=MSCD_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04225;old_locus_tag=MSCd_7470
NZ_LAUX01000120.1	Protein Homology	CDS	1660	3048	.	+	0	ID=cds-WP_045596641.1;Parent=gene-MSCD_RS04225;Dbxref=GenBank:WP_045596641.1;Name=WP_045596641.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448126.1;locus_tag=MSCD_RS04225;product=glycoside hydrolase family 1 protein;protein_id=WP_045596641.1;transl_table=4
NZ_LAUX01000120.1	RefSeq	gene	3050	4135	.	+	.	ID=gene-MSCD_RS04230;Name=MSCD_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04230;old_locus_tag=MSCd_7480
NZ_LAUX01000120.1	Protein Homology	CDS	3050	4135	.	+	0	ID=cds-WP_015545472.1;Parent=gene-MSCD_RS04230;Dbxref=GenBank:WP_015545472.1;Name=WP_015545472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862965.1;locus_tag=MSCD_RS04230;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_015545472.1;transl_table=4
NZ_LAUX01000120.1	RefSeq	gene	4511	5083	.	-	.	ID=gene-MSCD_RS05030;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=MSCD_RS05030;old_locus_tag=MSCd_7490
NZ_LAUX01000120.1	Protein Homology	CDS	4511	5083	.	-	0	ID=cds-WP_011166997.1;Parent=gene-MSCD_RS05030;Dbxref=GenBank:WP_011166997.1;Name=WP_011166997.1;Ontology_term=GO:0018117,GO:0042803,GO:0070733;gbkey=CDS;gene=fic;go_function=protein homodimerization activity|0042803||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698276.1;locus_tag=MSCD_RS05030;product=protein adenylyltransferase Fic;protein_id=WP_011166997.1;transl_table=4
NZ_LAUX01000120.1	RefSeq	gene	5464	6334	.	+	.	ID=gene-MSCD_RS04245;Name=MSCD_RS04245;end_range=6334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04245;partial=true
NZ_LAUX01000120.1	Protein Homology	CDS	5464	6334	.	+	0	ID=cds-WP_107682136.1;Parent=gene-MSCD_RS04245;Dbxref=GenBank:WP_107682136.1;Name=WP_107682136.1;end_range=6334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698279.1;locus_tag=MSCD_RS04245;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_107682136.1;transl_table=4
##sequence-region NZ_LAUX01000121.1 1 13168
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000121.1	RefSeq	region	1	13168	.	+	.	ID=NZ_LAUX01000121.1:1..13168;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000121.1	RefSeq	pseudogene	1	396	.	-	.	ID=gene-MSCD_RS04250;Name=MSCD_RS04250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04250;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000121.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-MSCD_RS04250;Parent=gene-MSCD_RS04250;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166994.1;locus_tag=MSCD_RS04250;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	548	1246	.	+	.	ID=gene-MSCD_RS04255;Name=MSCD_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04255;old_locus_tag=MSCd_7500
NZ_LAUX01000121.1	Protein Homology	CDS	548	1246	.	+	0	ID=cds-WP_011166993.1;Parent=gene-MSCD_RS04255;Dbxref=GenBank:WP_011166993.1;Name=WP_011166993.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166993.1;locus_tag=MSCD_RS04255;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011166993.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	1246	2181	.	+	.	ID=gene-MSCD_RS04260;Name=MSCD_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04260;old_locus_tag=MSCd_7510
NZ_LAUX01000121.1	Protein Homology	CDS	1246	2181	.	+	0	ID=cds-WP_011166992.1;Parent=gene-MSCD_RS04260;Dbxref=GenBank:WP_011166992.1;Name=WP_011166992.1;Ontology_term=GO:0005524,GO:0008662;gbkey=CDS;go_function=ATP binding|0005524||IEA,1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448135.1;locus_tag=MSCD_RS04260;product=1-phosphofructokinase;protein_id=WP_011166992.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	2184	4220	.	+	.	ID=gene-MSCD_RS04265;Name=MSCD_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04265;old_locus_tag=MSCd_7520
NZ_LAUX01000121.1	Protein Homology	CDS	2184	4220	.	+	0	ID=cds-WP_039275757.1;Parent=gene-MSCD_RS04265;Dbxref=GenBank:WP_039275757.1;Name=WP_039275757.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545567.1;locus_tag=MSCD_RS04265;product=PTS fructose transporter subunit IIABC;protein_id=WP_039275757.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	4297	5610	.	-	.	ID=gene-MSCD_RS04270;Name=MSCD_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04270;old_locus_tag=MSCd_7530
NZ_LAUX01000121.1	Protein Homology	CDS	4297	5610	.	-	0	ID=cds-WP_015545572.1;Parent=gene-MSCD_RS04270;Dbxref=GenBank:WP_015545572.1;Name=WP_015545572.1;Ontology_term=GO:0006206;gbkey=CDS;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862947.1;locus_tag=MSCD_RS04270;product=thymidine phosphorylase;protein_id=WP_015545572.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	5772	7448	.	+	.	ID=gene-MSCD_RS04275;Name=MSCD_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04275;old_locus_tag=MSCd_7540
NZ_LAUX01000121.1	Protein Homology	CDS	5772	7448	.	+	0	ID=cds-WP_107682137.1;Parent=gene-MSCD_RS04275;Dbxref=GenBank:WP_107682137.1;Name=WP_107682137.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862946.1;locus_tag=MSCD_RS04275;product=phospho-sugar mutase;protein_id=WP_107682137.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	7460	8128	.	+	.	ID=gene-MSCD_RS04280;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=MSCD_RS04280;old_locus_tag=MSCd_7550
NZ_LAUX01000121.1	Protein Homology	CDS	7460	8128	.	+	0	ID=cds-WP_015545363.1;Parent=gene-MSCD_RS04280;Dbxref=GenBank:WP_015545363.1;Name=WP_015545363.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862945.1;locus_tag=MSCD_RS04280;product=deoxyribose-phosphate aldolase;protein_id=WP_015545363.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	8194	9195	.	-	.	ID=gene-MSCD_RS04285;Name=MSCD_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04285;old_locus_tag=MSCd_7560
NZ_LAUX01000121.1	Protein Homology	CDS	8194	9195	.	-	0	ID=cds-WP_015545474.1;Parent=gene-MSCD_RS04285;Dbxref=GenBank:WP_015545474.1;Name=WP_015545474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698287.1;locus_tag=MSCD_RS04285;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_015545474.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	9188	9796	.	-	.	ID=gene-MSCD_RS04290;Name=MSCD_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04290;old_locus_tag=MSCd_7570
NZ_LAUX01000121.1	Protein Homology	CDS	9188	9796	.	-	0	ID=cds-WP_011166986.1;Parent=gene-MSCD_RS04290;Dbxref=GenBank:WP_011166986.1;Name=WP_011166986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698288.1;locus_tag=MSCD_RS04290;product=DUF6088 family protein;protein_id=WP_011166986.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	9894	11489	.	-	.	ID=gene-MSCD_RS04295;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=MSCD_RS04295;old_locus_tag=MSCd_7580
NZ_LAUX01000121.1	Protein Homology	CDS	9894	11489	.	-	0	ID=cds-WP_011166985.1;Parent=gene-MSCD_RS04295;Dbxref=GenBank:WP_011166985.1;Name=WP_011166985.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862942.1;locus_tag=MSCD_RS04295;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_011166985.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	11492	12328	.	-	.	ID=gene-MSCD_RS04300;Name=MSCD_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04300;old_locus_tag=MSCd_7590
NZ_LAUX01000121.1	Protein Homology	CDS	11492	12328	.	-	0	ID=cds-WP_015545680.1;Parent=gene-MSCD_RS04300;Dbxref=GenBank:WP_015545680.1;Name=WP_015545680.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862941.1;locus_tag=MSCD_RS04300;product=HAD-IIB family hydrolase;protein_id=WP_015545680.1;transl_table=4
NZ_LAUX01000121.1	RefSeq	gene	12321	13067	.	-	.	ID=gene-MSCD_RS04305;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=MSCD_RS04305;old_locus_tag=MSCd_7600
NZ_LAUX01000121.1	Protein Homology	CDS	12321	13067	.	-	0	ID=cds-WP_011166983.1;Parent=gene-MSCD_RS04305;Dbxref=GenBank:WP_011166983.1;Name=WP_011166983.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862940.1;locus_tag=MSCD_RS04305;product=triose-phosphate isomerase;protein_id=WP_011166983.1;transl_table=4
##sequence-region NZ_LAUX01000122.1 1 3160
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000122.1	RefSeq	region	1	3160	.	+	.	ID=NZ_LAUX01000122.1:1..3160;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000122.1	RefSeq	gene	43	777	.	-	.	ID=gene-MSCD_RS04310;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=MSCD_RS04310;old_locus_tag=MSCd_7610
NZ_LAUX01000122.1	Protein Homology	CDS	43	777	.	-	0	ID=cds-WP_011166981.1;Parent=gene-MSCD_RS04310;Dbxref=GenBank:WP_011166981.1;Name=WP_011166981.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448015.1;locus_tag=MSCD_RS04310;product=glucosamine-6-phosphate deaminase;protein_id=WP_011166981.1;transl_table=4
NZ_LAUX01000122.1	RefSeq	gene	884	959	.	-	.	ID=gene-MSCD_RS04315;Name=MSCD_RS04315;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04315;old_locus_tag=MSCd_7620
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	884	959	.	-	.	ID=rna-MSCD_RS04315;Parent=gene-MSCD_RS04315;anticodon=(pos:complement(924..926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04315;product=tRNA-Phe
NZ_LAUX01000122.1	tRNAscan-SE	exon	884	959	.	-	.	ID=exon-MSCD_RS04315-1;Parent=rna-MSCD_RS04315;anticodon=(pos:complement(924..926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04315;product=tRNA-Phe
NZ_LAUX01000122.1	RefSeq	gene	968	1044	.	-	.	ID=gene-MSCD_RS04320;Name=MSCD_RS04320;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04320;old_locus_tag=MSCd_7630
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	968	1044	.	-	.	ID=rna-MSCD_RS04320;Parent=gene-MSCD_RS04320;anticodon=(pos:complement(1008..1010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04320;product=tRNA-Asp
NZ_LAUX01000122.1	tRNAscan-SE	exon	968	1044	.	-	.	ID=exon-MSCD_RS04320-1;Parent=rna-MSCD_RS04320;anticodon=(pos:complement(1008..1010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04320;product=tRNA-Asp
NZ_LAUX01000122.1	RefSeq	gene	1047	1122	.	-	.	ID=gene-MSCD_RS04325;Name=MSCD_RS04325;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04325;old_locus_tag=MSCd_7640
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1047	1122	.	-	.	ID=rna-MSCD_RS04325;Parent=gene-MSCD_RS04325;anticodon=(pos:complement(1087..1089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04325;product=tRNA-Met
NZ_LAUX01000122.1	tRNAscan-SE	exon	1047	1122	.	-	.	ID=exon-MSCD_RS04325-1;Parent=rna-MSCD_RS04325;anticodon=(pos:complement(1087..1089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04325;product=tRNA-Met
NZ_LAUX01000122.1	RefSeq	gene	1145	1237	.	-	.	ID=gene-MSCD_RS04330;Name=MSCD_RS04330;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04330;old_locus_tag=MSCd_7650
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1145	1237	.	-	.	ID=rna-MSCD_RS04330;Parent=gene-MSCD_RS04330;anticodon=(pos:complement(1199..1201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04330;product=tRNA-Ser
NZ_LAUX01000122.1	tRNAscan-SE	exon	1145	1237	.	-	.	ID=exon-MSCD_RS04330-1;Parent=rna-MSCD_RS04330;anticodon=(pos:complement(1199..1201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04330;product=tRNA-Ser
NZ_LAUX01000122.1	RefSeq	gene	1280	1356	.	-	.	ID=gene-MSCD_RS04335;Name=MSCD_RS04335;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04335;old_locus_tag=MSCd_7660
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1280	1356	.	-	.	ID=rna-MSCD_RS04335;Parent=gene-MSCD_RS04335;anticodon=(pos:complement(1320..1322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04335;product=tRNA-Ile
NZ_LAUX01000122.1	tRNAscan-SE	exon	1280	1356	.	-	.	ID=exon-MSCD_RS04335-1;Parent=rna-MSCD_RS04335;anticodon=(pos:complement(1320..1322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04335;product=tRNA-Ile
NZ_LAUX01000122.1	RefSeq	gene	1368	1444	.	-	.	ID=gene-MSCD_RS04340;Name=MSCD_RS04340;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04340;old_locus_tag=MSCd_7670
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1368	1444	.	-	.	ID=rna-MSCD_RS04340;Parent=gene-MSCD_RS04340;anticodon=(pos:complement(1408..1410));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04340;product=tRNA-Met
NZ_LAUX01000122.1	tRNAscan-SE	exon	1368	1444	.	-	.	ID=exon-MSCD_RS04340-1;Parent=rna-MSCD_RS04340;anticodon=(pos:complement(1408..1410));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04340;product=tRNA-Met
NZ_LAUX01000122.1	RefSeq	gene	1450	1525	.	-	.	ID=gene-MSCD_RS04345;Name=MSCD_RS04345;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04345;old_locus_tag=MSCd_7680
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1450	1525	.	-	.	ID=rna-MSCD_RS04345;Parent=gene-MSCD_RS04345;anticodon=(pos:complement(1490..1492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04345;product=tRNA-Ala
NZ_LAUX01000122.1	tRNAscan-SE	exon	1450	1525	.	-	.	ID=exon-MSCD_RS04345-1;Parent=rna-MSCD_RS04345;anticodon=(pos:complement(1490..1492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04345;product=tRNA-Ala
NZ_LAUX01000122.1	RefSeq	gene	1536	1612	.	-	.	ID=gene-MSCD_RS04350;Name=MSCD_RS04350;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04350;old_locus_tag=MSCd_7690
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1536	1612	.	-	.	ID=rna-MSCD_RS04350;Parent=gene-MSCD_RS04350;anticodon=(pos:complement(1576..1578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04350;product=tRNA-Pro
NZ_LAUX01000122.1	tRNAscan-SE	exon	1536	1612	.	-	.	ID=exon-MSCD_RS04350-1;Parent=rna-MSCD_RS04350;anticodon=(pos:complement(1576..1578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04350;product=tRNA-Pro
NZ_LAUX01000122.1	RefSeq	gene	1660	1736	.	-	.	ID=gene-MSCD_RS04355;Name=MSCD_RS04355;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04355;old_locus_tag=MSCd_7700
NZ_LAUX01000122.1	tRNAscan-SE	tRNA	1660	1736	.	-	.	ID=rna-MSCD_RS04355;Parent=gene-MSCD_RS04355;anticodon=(pos:complement(1700..1702));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04355;product=tRNA-Arg
NZ_LAUX01000122.1	tRNAscan-SE	exon	1660	1736	.	-	.	ID=exon-MSCD_RS04355-1;Parent=rna-MSCD_RS04355;anticodon=(pos:complement(1700..1702));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04355;product=tRNA-Arg
NZ_LAUX01000122.1	RefSeq	pseudogene	1931	3080	.	-	.	ID=gene-MSCD_RS04360;Name=MSCD_RS04360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04360;pseudo=true
NZ_LAUX01000122.1	Protein Homology	CDS	1931	3080	.	-	0	ID=cds-MSCD_RS04360;Parent=gene-MSCD_RS04360;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448014.1;locus_tag=MSCD_RS04360;product=alpha/beta hydrolase;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000004.1 1 5694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000004.1	RefSeq	region	1	5694	.	+	.	ID=NZ_LAUX01000004.1:1..5694;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000004.1	RefSeq	gene	1	555	.	-	.	ID=gene-MSCD_RS00045;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=MSCD_RS00045;partial=true;start_range=.,1
NZ_LAUX01000004.1	Protein Homology	CDS	1	555	.	-	0	ID=cds-WP_107682059.1;Parent=gene-MSCD_RS00045;Dbxref=GenBank:WP_107682059.1;Name=WP_107682059.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166453.1;locus_tag=MSCD_RS00045;partial=true;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_107682059.1;start_range=.,1;transl_table=4
NZ_LAUX01000004.1	RefSeq	gene	561	992	.	-	.	ID=gene-MSCD_RS00050;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=MSCD_RS00050;old_locus_tag=MSCd_0050
NZ_LAUX01000004.1	Protein Homology	CDS	561	992	.	-	0	ID=cds-WP_011166452.1;Parent=gene-MSCD_RS00050;Dbxref=GenBank:WP_011166452.1;Name=WP_011166452.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269230.1;locus_tag=MSCD_RS00050;product=Holliday junction resolvase RuvX;protein_id=WP_011166452.1;transl_table=4
NZ_LAUX01000004.1	RefSeq	gene	994	1815	.	-	.	ID=gene-MSCD_RS00055;Name=MSCD_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00055;old_locus_tag=MSCd_0060
NZ_LAUX01000004.1	Protein Homology	CDS	994	1815	.	-	0	ID=cds-WP_011166451.1;Parent=gene-MSCD_RS00055;Dbxref=GenBank:WP_011166451.1;Name=WP_011166451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269229.1;locus_tag=MSCD_RS00055;product=phosphatase PAP2 family protein;protein_id=WP_011166451.1;transl_table=4
NZ_LAUX01000004.1	RefSeq	gene	1882	3237	.	-	.	ID=gene-MSCD_RS00060;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=MSCD_RS00060;old_locus_tag=MSCd_0070
NZ_LAUX01000004.1	Protein Homology	CDS	1882	3237	.	-	0	ID=cds-WP_011166450.1;Parent=gene-MSCD_RS00060;Dbxref=GenBank:WP_011166450.1;Name=WP_011166450.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363711.1;locus_tag=MSCD_RS00060;product=phosphopyruvate hydratase;protein_id=WP_011166450.1;transl_table=4
NZ_LAUX01000004.1	RefSeq	gene	3628	4461	.	+	.	ID=gene-MSCD_RS00070;Name=MSCD_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00070;old_locus_tag=MSCd_0080
NZ_LAUX01000004.1	Protein Homology	CDS	3628	4461	.	+	0	ID=cds-WP_015545360.1;Parent=gene-MSCD_RS00070;Dbxref=GenBank:WP_015545360.1;Name=WP_015545360.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697990.1;locus_tag=MSCD_RS00070;product=MurR/RpiR family transcriptional regulator;protein_id=WP_015545360.1;transl_table=4
NZ_LAUX01000004.1	RefSeq	gene	4580	5694	.	+	.	ID=gene-MSCD_RS00075;Name=MSCD_RS00075;end_range=5694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00075;partial=true
NZ_LAUX01000004.1	Protein Homology	CDS	4580	5694	.	+	0	ID=cds-WP_039275865.1;Parent=gene-MSCD_RS00075;Dbxref=GenBank:WP_039275865.1;Name=WP_039275865.1;Ontology_term=GO:0009254,GO:0009401,GO:0005351,GO:0008982,GO:0016301,GO:0090588,GO:0016020;end_range=5694,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity|0090588||IEA;go_process=peptidoglycan turnover|0009254||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862580.1;locus_tag=MSCD_RS00075;partial=true;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_039275865.1;transl_table=4
##sequence-region NZ_LAUX01000123.1 1 2375
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000123.1	RefSeq	region	1	2375	.	+	.	ID=NZ_LAUX01000123.1:1..2375;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000123.1	RefSeq	gene	36	167	.	+	.	ID=gene-MSCD_RS04365;Name=MSCD_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04365
NZ_LAUX01000123.1	Protein Homology	CDS	36	167	.	+	0	ID=cds-WP_011166412.1;Parent=gene-MSCD_RS04365;Dbxref=GenBank:WP_011166412.1;Name=WP_011166412.1;Ontology_term=GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;inference=COORDINATES: protein motif:HMM:NF012442.7;locus_tag=MSCD_RS04365;product=HU family DNA-binding protein;protein_id=WP_011166412.1;transl_table=4
NZ_LAUX01000123.1	RefSeq	gene	222	1514	.	+	.	ID=gene-MSCD_RS04370;Name=MSCD_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04370;old_locus_tag=MSCd_7720
NZ_LAUX01000123.1	Protein Homology	CDS	222	1514	.	+	0	ID=cds-WP_011166411.1;Parent=gene-MSCD_RS04370;Dbxref=GenBank:WP_011166411.1;Name=WP_011166411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584600.1;locus_tag=MSCD_RS04370;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166411.1;transl_table=4
NZ_LAUX01000123.1	RefSeq	gene	1568	2053	.	+	.	ID=gene-MSCD_RS04375;Name=MSCD_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04375;old_locus_tag=MSCd_7730
NZ_LAUX01000123.1	Protein Homology	CDS	1568	2053	.	+	0	ID=cds-WP_011166410.1;Parent=gene-MSCD_RS04375;Dbxref=GenBank:WP_011166410.1;Name=WP_011166410.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166410.1;locus_tag=MSCD_RS04375;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166410.1;transl_table=4
NZ_LAUX01000123.1	RefSeq	pseudogene	2166	2375	.	+	.	ID=gene-MSCD_RS04380;Name=MSCD_RS04380;end_range=2375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04380;partial=true;pseudo=true
NZ_LAUX01000123.1	Protein Homology	CDS	2166	2375	.	+	0	ID=cds-MSCD_RS04380;Parent=gene-MSCD_RS04380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035082.1;locus_tag=MSCD_RS04380;partial=true;product=single-stranded DNA-binding protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000005.1 1 2587
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000005.1	RefSeq	region	1	2587	.	+	.	ID=NZ_LAUX01000005.1:1..2587;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000005.1	RefSeq	gene	1	610	.	+	.	ID=gene-MSCD_RS00080;Name=MSCD_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00080;partial=true;start_range=.,1
NZ_LAUX01000005.1	Protein Homology	CDS	1	610	.	+	1	ID=cds-WP_334198890.1;Parent=gene-MSCD_RS00080;Dbxref=GenBank:WP_334198890.1;Name=WP_334198890.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862580.1;locus_tag=MSCD_RS00080;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_334198890.1;start_range=.,1;transl_table=4
NZ_LAUX01000005.1	RefSeq	gene	613	1521	.	+	.	ID=gene-MSCD_RS00085;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=MSCD_RS00085;old_locus_tag=MSCd_0090
NZ_LAUX01000005.1	Protein Homology	CDS	613	1521	.	+	0	ID=cds-WP_011166445.1;Parent=gene-MSCD_RS00085;Dbxref=GenBank:WP_011166445.1;Name=WP_011166445.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166445.1;locus_tag=MSCD_RS00085;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_011166445.1;transl_table=4
NZ_LAUX01000005.1	RefSeq	gene	1838	2056	.	-	.	ID=gene-MSCD_RS05070;Name=MSCD_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05070
NZ_LAUX01000005.1	Protein Homology	CDS	1838	2056	.	-	0	ID=cds-WP_227716913.1;Parent=gene-MSCD_RS05070;Dbxref=GenBank:WP_227716913.1;Name=WP_227716913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=MSCD_RS05070;product=BspA family leucine-rich repeat surface protein;protein_id=WP_227716913.1;transl_table=4
NZ_LAUX01000005.1	RefSeq	gene	2053	2229	.	-	.	ID=gene-MSCD_RS05075;Name=MSCD_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05075
NZ_LAUX01000005.1	Protein Homology	CDS	2053	2229	.	-	0	ID=cds-WP_011166444.1;Parent=gene-MSCD_RS05075;Dbxref=GenBank:WP_011166444.1;Name=WP_011166444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166444.1;locus_tag=MSCD_RS05075;product=hypothetical protein;protein_id=WP_011166444.1;transl_table=4
##sequence-region NZ_LAUX01000006.1 1 4544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000006.1	RefSeq	region	1	4544	.	+	.	ID=NZ_LAUX01000006.1:1..4544;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000006.1	RefSeq	pseudogene	269	1561	.	-	.	ID=gene-MSCD_RS00100;Name=MSCD_RS00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00100;old_locus_tag=MSCd_0100;pseudo=true
NZ_LAUX01000006.1	Protein Homology	CDS	269	1561	.	-	0	ID=cds-MSCD_RS00100;Parent=gene-MSCD_RS00100;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729249.1;locus_tag=MSCD_RS00100;product=ATP-binding protein;pseudo=true;transl_table=4
NZ_LAUX01000006.1	RefSeq	gene	1882	2763	.	+	.	ID=gene-MSCD_RS00105;Name=MSCD_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00105;old_locus_tag=MSCd_0120
NZ_LAUX01000006.1	Protein Homology	CDS	1882	2763	.	+	0	ID=cds-WP_011166439.1;Parent=gene-MSCD_RS00105;Dbxref=GenBank:WP_011166439.1;Name=WP_011166439.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269187.1;locus_tag=MSCD_RS00105;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_011166439.1;transl_table=4
NZ_LAUX01000006.1	RefSeq	gene	2797	4461	.	-	.	ID=gene-MSCD_RS00110;Name=MSCD_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00110;old_locus_tag=MSCd_0130
NZ_LAUX01000006.1	Protein Homology	CDS	2797	4461	.	-	0	ID=cds-WP_011166438.1;Parent=gene-MSCD_RS00110;Dbxref=GenBank:WP_011166438.1;Name=WP_011166438.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166438.1;locus_tag=MSCD_RS00110;product=LppA family lipoprotein;protein_id=WP_011166438.1;transl_table=4
##sequence-region NZ_LAUX01000124.1 1 3151
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000124.1	RefSeq	region	1	3151	.	+	.	ID=NZ_LAUX01000124.1:1..3151;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000124.1	RefSeq	gene	98	499	.	-	.	ID=gene-MSCD_RS04385;Name=MSCD_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04385;old_locus_tag=MSCd_7740
NZ_LAUX01000124.1	Protein Homology	CDS	98	499	.	-	0	ID=cds-WP_011166961.1;Parent=gene-MSCD_RS04385;Dbxref=GenBank:WP_011166961.1;Name=WP_011166961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729837.1;locus_tag=MSCD_RS04385;product=RidA family protein;protein_id=WP_011166961.1;transl_table=4
NZ_LAUX01000124.1	RefSeq	gene	509	1699	.	-	.	ID=gene-MSCD_RS04390;Name=MSCD_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04390;old_locus_tag=MSCd_7750
NZ_LAUX01000124.1	Protein Homology	CDS	509	1699	.	-	0	ID=cds-WP_011166960.1;Parent=gene-MSCD_RS04390;Dbxref=GenBank:WP_011166960.1;Name=WP_011166960.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166969.1;locus_tag=MSCD_RS04390;product=MalY/PatB family protein;protein_id=WP_011166960.1;transl_table=4
NZ_LAUX01000124.1	RefSeq	pseudogene	1831	2693	.	+	.	ID=gene-MSCD_RS04395;Name=MSCD_RS04395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04395;pseudo=true
NZ_LAUX01000124.1	Protein Homology	CDS	1831	2693	.	+	0	ID=cds-MSCD_RS04395;Parent=gene-MSCD_RS04395;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448008.1;locus_tag=MSCD_RS04395;product=HAD family hydrolase;pseudo=true;transl_table=4
NZ_LAUX01000124.1	RefSeq	pseudogene	2916	3151	.	+	.	ID=gene-MSCD_RS04400;Name=MSCD_RS04400;end_range=3151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04400;partial=true;pseudo=true
NZ_LAUX01000124.1	Protein Homology	CDS	2916	3151	.	+	0	ID=cds-MSCD_RS04400;Parent=gene-MSCD_RS04400;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3151,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584514.1;locus_tag=MSCD_RS04400;partial=true;product=ABC transporter thiamine pyrophosphate-binding lipoprotein p37/Cypl;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000125.1 1 1070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000125.1	RefSeq	region	1	1070	.	+	.	ID=NZ_LAUX01000125.1:1..1070;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000125.1	RefSeq	pseudogene	76	806	.	+	.	ID=gene-MSCD_RS05790;Name=MSCD_RS05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05790;pseudo=true
NZ_LAUX01000125.1	Protein Homology	CDS	76	806	.	+	0	ID=cds-MSCD_RS05790;Parent=gene-MSCD_RS05790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046011.1;locus_tag=MSCD_RS05790;product=MAG4940 family membrane protein;pseudo=true;transl_table=4
NZ_LAUX01000125.1	RefSeq	pseudogene	818	1070	.	+	.	ID=gene-MSCD_RS04415;Name=MSCD_RS04415;end_range=1070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04415;partial=true;pseudo=true
NZ_LAUX01000125.1	Protein Homology	CDS	818	1070	.	+	0	ID=cds-MSCD_RS04415;Parent=gene-MSCD_RS04415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387571.1;locus_tag=MSCD_RS04415;partial=true;product=MSC_0775 family lipoprotein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000126.1 1 3980
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000126.1	RefSeq	region	1	3980	.	+	.	ID=NZ_LAUX01000126.1:1..3980;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000126.1	RefSeq	gene	69	908	.	+	.	ID=gene-MSCD_RS04420;Name=MSCD_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04420
NZ_LAUX01000126.1	Protein Homology	CDS	69	908	.	+	0	ID=cds-WP_015545618.1;Parent=gene-MSCD_RS04420;Dbxref=GenBank:WP_015545618.1;Name=WP_015545618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545618.1;locus_tag=MSCD_RS04420;product=hypothetical protein;protein_id=WP_015545618.1;transl_table=4
NZ_LAUX01000126.1	RefSeq	gene	911	1489	.	+	.	ID=gene-MSCD_RS04425;Name=MSCD_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04425;old_locus_tag=MSCd_7790
NZ_LAUX01000126.1	Protein Homology	CDS	911	1489	.	+	0	ID=cds-WP_011166947.1;Parent=gene-MSCD_RS04425;Dbxref=GenBank:WP_011166947.1;Name=WP_011166947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448000.1;locus_tag=MSCD_RS04425;product=hypothetical protein;protein_id=WP_011166947.1;transl_table=4
NZ_LAUX01000126.1	RefSeq	gene	1492	3036	.	+	.	ID=gene-MSCD_RS04430;Name=MSCD_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04430;old_locus_tag=MSCd_7800
NZ_LAUX01000126.1	Protein Homology	CDS	1492	3036	.	+	0	ID=cds-WP_107682139.1;Parent=gene-MSCD_RS04430;Dbxref=GenBank:WP_107682139.1;Name=WP_107682139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166946.1;locus_tag=MSCD_RS04430;product=DUF262 domain-containing protein;protein_id=WP_107682139.1;transl_table=4
NZ_LAUX01000126.1	RefSeq	gene	3101	3334	.	+	.	ID=gene-MSCD_RS05555;Name=MSCD_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05555
NZ_LAUX01000126.1	Protein Homology	CDS	3101	3334	.	+	0	ID=cds-WP_230592205.1;Parent=gene-MSCD_RS05555;Dbxref=GenBank:WP_230592205.1;Name=WP_230592205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019151.7;locus_tag=MSCD_RS05555;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_230592205.1;transl_table=4
NZ_LAUX01000126.1	RefSeq	gene	3471	3980	.	+	.	ID=gene-MSCD_RS04440;Name=MSCD_RS04440;end_range=3980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04440;partial=true
NZ_LAUX01000126.1	Protein Homology	CDS	3471	3980	.	+	0	ID=cds-WP_416371527.1;Parent=gene-MSCD_RS04440;Dbxref=GenBank:WP_416371527.1;Name=WP_416371527.1;end_range=3980,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862926.1;locus_tag=MSCD_RS04440;partial=true;product=MAG4940 family membrane protein;protein_id=WP_416371527.1;transl_table=4
##sequence-region NZ_LAUX01000007.1 1 5506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000007.1	RefSeq	region	1	5506	.	+	.	ID=NZ_LAUX01000007.1:1..5506;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000007.1	RefSeq	gene	36	1826	.	-	.	ID=gene-MSCD_RS00115;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=MSCD_RS00115;old_locus_tag=MSCd_0140
NZ_LAUX01000007.1	Protein Homology	CDS	36	1826	.	-	0	ID=cds-WP_011166436.1;Parent=gene-MSCD_RS00115;Dbxref=GenBank:WP_011166436.1;Name=WP_011166436.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004428412.1;locus_tag=MSCD_RS00115;product=oligoendopeptidase F;protein_id=WP_011166436.1;transl_table=4
NZ_LAUX01000007.1	RefSeq	gene	1826	2509	.	-	.	ID=gene-MSCD_RS00120;Name=MSCD_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00120;old_locus_tag=MSCd_0150
NZ_LAUX01000007.1	Protein Homology	CDS	1826	2509	.	-	0	ID=cds-WP_011166435.1;Parent=gene-MSCD_RS00120;Dbxref=GenBank:WP_011166435.1;Name=WP_011166435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862567.1;locus_tag=MSCD_RS00120;product=restriction endonuclease subunit S domain-containing protein;protein_id=WP_011166435.1;transl_table=4
NZ_LAUX01000007.1	RefSeq	pseudogene	2525	3879	.	-	.	ID=gene-MSCD_RS00125;Name=MSCD_RS00125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00125;old_locus_tag=MSCd_0160;pseudo=true
NZ_LAUX01000007.1	Protein Homology	CDS	2525	3879	.	-	0	ID=cds-MSCD_RS00125;Parent=gene-MSCD_RS00125;Note=frameshifted;Ontology_term=GO:0019538,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862568.1;locus_tag=MSCD_RS00125;product=M17 family metallopeptidase;pseudo=true;transl_table=4
NZ_LAUX01000007.1	RefSeq	pseudogene	3995	5290	.	-	.	ID=gene-MSCD_RS00135;Name=MSCD_RS00135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00135;old_locus_tag=MSCd_0190;pseudo=true
NZ_LAUX01000007.1	Protein Homology	CDS	3995	5290	.	-	0	ID=cds-MSCD_RS00135;Parent=gene-MSCD_RS00135;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269195.1;locus_tag=MSCD_RS00135;product=ATP-binding protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000008.1 1 17965
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000008.1	RefSeq	region	1	17965	.	+	.	ID=NZ_LAUX01000008.1:1..17965;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000008.1	RefSeq	gene	1	115	.	+	.	ID=gene-MSCD_RS04820;Name=MSCD_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04820;partial=true;start_range=.,1
NZ_LAUX01000008.1	Protein Homology	CDS	1	115	.	+	1	ID=cds-WP_181256852.1;Parent=gene-MSCD_RS04820;Dbxref=GenBank:WP_181256852.1;Name=WP_181256852.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=MSCD_RS04820;partial=true;product=IS3 family transposase;protein_id=WP_181256852.1;start_range=.,1;transl_table=4
NZ_LAUX01000008.1	RefSeq	pseudogene	134	713	.	+	.	ID=gene-MSCD_RS05615;Name=MSCD_RS05615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05615;pseudo=true
NZ_LAUX01000008.1	Protein Homology	CDS	134	713	.	+	0	ID=cds-MSCD_RS05615;Parent=gene-MSCD_RS05615;Note=frameshifted;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387087.1;locus_tag=MSCD_RS05615;product=chromate transporter;pseudo=true;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	713	1390	.	+	.	ID=gene-MSCD_RS00145;Name=MSCD_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00145;old_locus_tag=MSCd_0220
NZ_LAUX01000008.1	Protein Homology	CDS	713	1390	.	+	0	ID=cds-WP_015545546.1;Parent=gene-MSCD_RS00145;Dbxref=GenBank:WP_015545546.1;Name=WP_015545546.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545546.1;locus_tag=MSCD_RS00145;product=chromate transporter;protein_id=WP_015545546.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	1523	2182	.	+	.	ID=gene-MSCD_RS00150;Name=MSCD_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00150;old_locus_tag=MSCd_0230
NZ_LAUX01000008.1	Protein Homology	CDS	1523	2182	.	+	0	ID=cds-WP_015545285.1;Parent=gene-MSCD_RS00150;Dbxref=GenBank:WP_015545285.1;Name=WP_015545285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.7;locus_tag=MSCD_RS00150;product=Abi family protein;protein_id=WP_015545285.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	2227	2481	.	+	.	ID=gene-MSCD_RS05090;Name=MSCD_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05090;old_locus_tag=MSCd_0240
NZ_LAUX01000008.1	GeneMarkS-2+	CDS	2227	2481	.	+	0	ID=cds-WP_011166427.1;Parent=gene-MSCD_RS05090;Dbxref=GenBank:WP_011166427.1;Name=WP_011166427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05090;product=hypothetical protein;protein_id=WP_011166427.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	2827	5955	.	-	.	ID=gene-MSCD_RS00155;Name=potCD;gbkey=Gene;gene=potCD;gene_biotype=protein_coding;locus_tag=MSCD_RS00155;old_locus_tag=MSCd_0250
NZ_LAUX01000008.1	Protein Homology	CDS	2827	5955	.	-	0	ID=cds-WP_011166426.1;Parent=gene-MSCD_RS00155;Dbxref=GenBank:WP_011166426.1;Name=WP_011166426.1;Ontology_term=GO:0015846,GO:0022857;gbkey=CDS;gene=potCD;go_function=transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862571.1;locus_tag=MSCD_RS00155;product=spermidine/putrescine ABC transporter permease/substrate-binding protein;protein_id=WP_011166426.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	5940	6932	.	-	.	ID=gene-MSCD_RS00160;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=MSCD_RS00160;old_locus_tag=MSCd_0260
NZ_LAUX01000008.1	Protein Homology	CDS	5940	6932	.	-	0	ID=cds-WP_011166425.1;Parent=gene-MSCD_RS00160;Dbxref=GenBank:WP_011166425.1;Name=WP_011166425.1;Ontology_term=GO:0015846,GO:0022857;gbkey=CDS;gene=potB;go_function=transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166425.1;locus_tag=MSCD_RS00160;product=spermidine/putrescine ABC transporter permease;protein_id=WP_011166425.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	6932	7987	.	-	.	ID=gene-MSCD_RS00165;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=MSCD_RS00165;old_locus_tag=MSCd_0270
NZ_LAUX01000008.1	Protein Homology	CDS	6932	7987	.	-	0	ID=cds-WP_011166424.1;Parent=gene-MSCD_RS00165;Dbxref=GenBank:WP_011166424.1;Name=WP_011166424.1;Ontology_term=GO:1902047,GO:0005524;gbkey=CDS;gene=potA;go_function=ATP binding|0005524||IEA;go_process=polyamine transmembrane transport|1902047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269219.1;locus_tag=MSCD_RS00165;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_011166424.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	8352	8717	.	-	.	ID=gene-MSCD_RS00170;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=MSCD_RS00170;old_locus_tag=MSCd_0280
NZ_LAUX01000008.1	Protein Homology	CDS	8352	8717	.	-	0	ID=cds-WP_011166423.1;Parent=gene-MSCD_RS00170;Dbxref=GenBank:WP_011166423.1;Name=WP_011166423.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166423.1;locus_tag=MSCD_RS00170;product=50S ribosomal protein L20;protein_id=WP_011166423.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	8736	8927	.	-	.	ID=gene-MSCD_RS00175;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=MSCD_RS00175;old_locus_tag=MSCd_0290
NZ_LAUX01000008.1	Protein Homology	CDS	8736	8927	.	-	0	ID=cds-WP_011166422.1;Parent=gene-MSCD_RS00175;Dbxref=GenBank:WP_011166422.1;Name=WP_011166422.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166422.1;locus_tag=MSCD_RS00175;product=50S ribosomal protein L35;protein_id=WP_011166422.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	8953	9498	.	-	.	ID=gene-MSCD_RS00180;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=MSCD_RS00180;old_locus_tag=MSCd_0300
NZ_LAUX01000008.1	Protein Homology	CDS	8953	9498	.	-	0	ID=cds-WP_011166421.1;Parent=gene-MSCD_RS00180;Dbxref=GenBank:WP_011166421.1;Name=WP_011166421.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269221.1;locus_tag=MSCD_RS00180;product=translation initiation factor IF-3;protein_id=WP_011166421.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	9688	10290	.	-	.	ID=gene-MSCD_RS00185;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=MSCD_RS00185;old_locus_tag=MSCd_0310
NZ_LAUX01000008.1	Protein Homology	CDS	9688	10290	.	-	0	ID=cds-WP_011166420.1;Parent=gene-MSCD_RS00185;Dbxref=GenBank:WP_011166420.1;Name=WP_011166420.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729347.1;locus_tag=MSCD_RS00185;product=peptide deformylase;protein_id=WP_011166420.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	10349	10921	.	+	.	ID=gene-MSCD_RS00190;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=MSCD_RS00190;old_locus_tag=MSCd_0320
NZ_LAUX01000008.1	Protein Homology	CDS	10349	10921	.	+	0	ID=cds-WP_011166419.1;Parent=gene-MSCD_RS00190;Dbxref=GenBank:WP_011166419.1;Name=WP_011166419.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729348.1;locus_tag=MSCD_RS00190;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_011166419.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	10924	11817	.	+	.	ID=gene-MSCD_RS00195;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=MSCD_RS00195;old_locus_tag=MSCd_0330
NZ_LAUX01000008.1	Protein Homology	CDS	10924	11817	.	+	0	ID=cds-WP_011166418.1;Parent=gene-MSCD_RS00195;Dbxref=GenBank:WP_011166418.1;Name=WP_011166418.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269224.1;locus_tag=MSCD_RS00195;product=guanylate kinase;protein_id=WP_011166418.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	11807	13078	.	+	.	ID=gene-MSCD_RS00200;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=MSCD_RS00200;old_locus_tag=MSCd_0340
NZ_LAUX01000008.1	Protein Homology	CDS	11807	13078	.	+	0	ID=cds-WP_015545663.1;Parent=gene-MSCD_RS00200;Dbxref=GenBank:WP_015545663.1;Name=WP_015545663.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729349.1;locus_tag=MSCD_RS00200;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_015545663.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	13071	14096	.	+	.	ID=gene-MSCD_RS00205;Name=MSCD_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00205;old_locus_tag=MSCd_0350
NZ_LAUX01000008.1	Protein Homology	CDS	13071	14096	.	+	0	ID=cds-WP_011166416.1;Parent=gene-MSCD_RS00205;Dbxref=GenBank:WP_011166416.1;Name=WP_011166416.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269225.1;locus_tag=MSCD_RS00205;product=DNA cytosine methyltransferase;protein_id=WP_011166416.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	14089	14853	.	+	.	ID=gene-MSCD_RS00210;Name=MSCD_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00210;old_locus_tag=MSCd_0360
NZ_LAUX01000008.1	Protein Homology	CDS	14089	14853	.	+	0	ID=cds-WP_011166415.1;Parent=gene-MSCD_RS00210;Dbxref=GenBank:WP_011166415.1;Name=WP_011166415.1;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269226.1;locus_tag=MSCD_RS00210;product=Eco47II family restriction endonuclease;protein_id=WP_011166415.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	14885	16714	.	-	.	ID=gene-MSCD_RS00215;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=MSCD_RS00215;old_locus_tag=MSCd_0370
NZ_LAUX01000008.1	Protein Homology	CDS	14885	16714	.	-	0	ID=cds-WP_015545564.1;Parent=gene-MSCD_RS00215;Dbxref=GenBank:WP_015545564.1;Name=WP_015545564.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862576.1;locus_tag=MSCD_RS00215;product=translational GTPase TypA;protein_id=WP_015545564.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	16958	17161	.	-	.	ID=gene-MSCD_RS05095;Name=MSCD_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05095
NZ_LAUX01000008.1	GeneMarkS-2+	CDS	16958	17161	.	-	0	ID=cds-WP_230592172.1;Parent=gene-MSCD_RS05095;Dbxref=GenBank:WP_230592172.1;Name=WP_230592172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05095;product=hypothetical protein;protein_id=WP_230592172.1;transl_table=4
NZ_LAUX01000008.1	RefSeq	gene	17101	17877	.	-	.	ID=gene-MSCD_RS05100;Name=MSCD_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05100
NZ_LAUX01000008.1	Protein Homology	CDS	17101	17877	.	-	0	ID=cds-WP_308506910.1;Parent=gene-MSCD_RS05100;Dbxref=GenBank:WP_308506910.1;Name=WP_308506910.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.7;locus_tag=MSCD_RS05100;product=DDE-type integrase/transposase/recombinase;protein_id=WP_308506910.1;transl_table=4
##sequence-region NZ_LAUX01000009.1 1 3229
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000009.1	RefSeq	region	1	3229	.	+	.	ID=NZ_LAUX01000009.1:1..3229;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000009.1	RefSeq	gene	3	638	.	+	.	ID=gene-MSCD_RS00225;Name=MSCD_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00225
NZ_LAUX01000009.1	Protein Homology	CDS	3	638	.	+	0	ID=cds-WP_308506911.1;Parent=gene-MSCD_RS00225;Dbxref=GenBank:WP_308506911.1;Name=WP_308506911.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166405.1;locus_tag=MSCD_RS00225;product=BspA family leucine-rich repeat surface protein;protein_id=WP_308506911.1;transl_table=4
NZ_LAUX01000009.1	RefSeq	gene	698	1111	.	+	.	ID=gene-MSCD_RS00230;Name=MSCD_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00230;old_locus_tag=MSCd_0380
NZ_LAUX01000009.1	Protein Homology	CDS	698	1111	.	+	0	ID=cds-WP_011166404.1;Parent=gene-MSCD_RS00230;Dbxref=GenBank:WP_011166404.1;Name=WP_011166404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387182.1;locus_tag=MSCD_RS00230;product=hypothetical protein;protein_id=WP_011166404.1;transl_table=4
NZ_LAUX01000009.1	RefSeq	gene	1190	1993	.	+	.	ID=gene-MSCD_RS00235;Name=MSCD_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00235;old_locus_tag=MSCd_0390
NZ_LAUX01000009.1	Protein Homology	CDS	1190	1993	.	+	0	ID=cds-WP_011166403.1;Parent=gene-MSCD_RS00235;Dbxref=GenBank:WP_011166403.1;Name=WP_011166403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387183.1;locus_tag=MSCD_RS00235;product=hypothetical protein;protein_id=WP_011166403.1;transl_table=4
NZ_LAUX01000009.1	RefSeq	gene	1994	2662	.	+	.	ID=gene-MSCD_RS00240;Name=MSCD_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00240;old_locus_tag=MSCd_0400
NZ_LAUX01000009.1	Protein Homology	CDS	1994	2662	.	+	0	ID=cds-WP_011166402.1;Parent=gene-MSCD_RS00240;Dbxref=GenBank:WP_011166402.1;Name=WP_011166402.1;Ontology_term=GO:0009307,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269302.1;locus_tag=MSCD_RS00240;product=DNA adenine methylase;protein_id=WP_011166402.1;transl_table=4
NZ_LAUX01000009.1	RefSeq	gene	2666	3061	.	+	.	ID=gene-MSCD_RS00245;Name=MSCD_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00245;old_locus_tag=MSCd_0410
NZ_LAUX01000009.1	Protein Homology	CDS	2666	3061	.	+	0	ID=cds-WP_011166401.1;Parent=gene-MSCD_RS00245;Dbxref=GenBank:WP_011166401.1;Name=WP_011166401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166401.1;locus_tag=MSCD_RS00245;product=hypothetical protein;protein_id=WP_011166401.1;transl_table=4
##sequence-region NZ_LAUX01000010.1 1 5688
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000010.1	RefSeq	region	1	5688	.	+	.	ID=NZ_LAUX01000010.1:1..5688;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000010.1	RefSeq	pseudogene	1	717	.	+	.	ID=gene-MSCD_RS00250;Name=MSCD_RS00250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00250;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000010.1	GeneMarkS-2+	CDS	1	717	.	+	0	ID=cds-MSCD_RS00250;Parent=gene-MSCD_RS00250;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS00250;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000010.1	RefSeq	gene	669	2318	.	+	.	ID=gene-MSCD_RS00255;Name=MSCD_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00255;old_locus_tag=MSCd_0420
NZ_LAUX01000010.1	Protein Homology	CDS	669	2318	.	+	0	ID=cds-WP_080512640.1;Parent=gene-MSCD_RS00255;Dbxref=GenBank:WP_080512640.1;Name=WP_080512640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166399.1;locus_tag=MSCD_RS00255;product=hypothetical protein;protein_id=WP_080512640.1;transl_table=4
NZ_LAUX01000010.1	RefSeq	gene	2566	3852	.	+	.	ID=gene-MSCD_RS00260;Name=MSCD_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00260;old_locus_tag=MSCd_0430
NZ_LAUX01000010.1	Protein Homology	CDS	2566	3852	.	+	0	ID=cds-WP_011166398.1;Parent=gene-MSCD_RS00260;Dbxref=GenBank:WP_011166398.1;Name=WP_011166398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166398.1;locus_tag=MSCD_RS00260;product=hypothetical protein;protein_id=WP_011166398.1;transl_table=4
NZ_LAUX01000010.1	RefSeq	gene	3886	4056	.	+	.	ID=gene-MSCD_RS05105;Name=MSCD_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05105
NZ_LAUX01000010.1	GeneMarkS-2+	CDS	3886	4056	.	+	0	ID=cds-WP_258177014.1;Parent=gene-MSCD_RS05105;Dbxref=GenBank:WP_258177014.1;Name=WP_258177014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05105;product=hypothetical protein;protein_id=WP_258177014.1;transl_table=4
NZ_LAUX01000010.1	RefSeq	gene	4034	5041	.	+	.	ID=gene-MSCD_RS00265;Name=MSCD_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00265;old_locus_tag=MSCd_0440
NZ_LAUX01000010.1	GeneMarkS-2+	CDS	4034	5041	.	+	0	ID=cds-WP_258177015.1;Parent=gene-MSCD_RS00265;Dbxref=GenBank:WP_258177015.1;Name=WP_258177015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS00265;product=hypothetical protein;protein_id=WP_258177015.1;transl_table=4
##sequence-region NZ_LAUX01000011.1 1 5099
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000011.1	RefSeq	region	1	5099	.	+	.	ID=NZ_LAUX01000011.1:1..5099;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000011.1	RefSeq	gene	297	437	.	-	.	ID=gene-MSCD_RS00270;Name=MSCD_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00270
NZ_LAUX01000011.1	Protein Homology	CDS	297	437	.	-	0	ID=cds-WP_011166395.1;Parent=gene-MSCD_RS00270;Dbxref=GenBank:WP_011166395.1;Name=WP_011166395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697753.1;locus_tag=MSCD_RS00270;product=hypothetical protein;protein_id=WP_011166395.1;transl_table=4
NZ_LAUX01000011.1	RefSeq	gene	427	1347	.	-	.	ID=gene-MSCD_RS00275;Name=MSCD_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00275;old_locus_tag=MSCd_0450
NZ_LAUX01000011.1	Protein Homology	CDS	427	1347	.	-	0	ID=cds-WP_107682060.1;Parent=gene-MSCD_RS00275;Dbxref=GenBank:WP_107682060.1;Name=WP_107682060.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545545.1;locus_tag=MSCD_RS00275;product=Fic family protein;protein_id=WP_107682060.1;transl_table=4
NZ_LAUX01000011.1	RefSeq	gene	1475	3919	.	-	.	ID=gene-MSCD_RS00280;Name=MSCD_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00280;old_locus_tag=MSCd_0460
NZ_LAUX01000011.1	Protein Homology	CDS	1475	3919	.	-	0	ID=cds-WP_011166393.1;Parent=gene-MSCD_RS00280;Dbxref=GenBank:WP_011166393.1;Name=WP_011166393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545300.1;locus_tag=MSCD_RS00280;product=Mbov_0397 family ICE element conjugal transfer ATPase;protein_id=WP_011166393.1;transl_table=4
NZ_LAUX01000011.1	RefSeq	gene	3925	4446	.	-	.	ID=gene-MSCD_RS00285;Name=MSCD_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00285;old_locus_tag=MSCd_0470
NZ_LAUX01000011.1	Protein Homology	CDS	3925	4446	.	-	0	ID=cds-WP_011166392.1;Parent=gene-MSCD_RS00285;Dbxref=GenBank:WP_011166392.1;Name=WP_011166392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166392.1;locus_tag=MSCD_RS00285;product=hypothetical protein;protein_id=WP_011166392.1;transl_table=4
NZ_LAUX01000011.1	RefSeq	gene	4528	4989	.	-	.	ID=gene-MSCD_RS00290;Name=MSCD_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00290;old_locus_tag=MSCd_0480
NZ_LAUX01000011.1	Protein Homology	CDS	4528	4989	.	-	0	ID=cds-WP_011166391.1;Parent=gene-MSCD_RS00290;Dbxref=GenBank:WP_011166391.1;Name=WP_011166391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584583.1;locus_tag=MSCD_RS00290;product=hypothetical protein;protein_id=WP_011166391.1;transl_table=4
##sequence-region NZ_LAUX01000012.1 1 17532
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000012.1	RefSeq	region	1	17532	.	+	.	ID=NZ_LAUX01000012.1:1..17532;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000012.1	RefSeq	gene	1	1065	.	-	.	ID=gene-MSCD_RS00295;Name=MSCD_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00295;partial=true;start_range=.,1
NZ_LAUX01000012.1	Protein Homology	CDS	1	1065	.	-	0	ID=cds-WP_181256853.1;Parent=gene-MSCD_RS00295;Dbxref=GenBank:WP_181256853.1;Name=WP_181256853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545315.1;locus_tag=MSCD_RS00295;partial=true;product=DNA-methyltransferase;protein_id=WP_181256853.1;start_range=.,1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	1111	1695	.	-	.	ID=gene-MSCD_RS00300;Name=MSCD_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00300;old_locus_tag=MSCd_0490
NZ_LAUX01000012.1	Protein Homology	CDS	1111	1695	.	-	0	ID=cds-WP_015545268.1;Parent=gene-MSCD_RS00300;Dbxref=GenBank:WP_015545268.1;Name=WP_015545268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545268.1;locus_tag=MSCD_RS00300;product=ApaLI family restriction endonuclease;protein_id=WP_015545268.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	1977	5120	.	-	.	ID=gene-MSCD_RS00305;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=MSCD_RS00305;old_locus_tag=MSCd_0500
NZ_LAUX01000012.1	Protein Homology	CDS	1977	5120	.	-	0	ID=cds-WP_045596430.1;Parent=gene-MSCD_RS00305;Dbxref=GenBank:WP_045596430.1;Name=WP_045596430.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=oppA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166386.1;locus_tag=MSCD_RS00305;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_045596430.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	5137	7005	.	-	.	ID=gene-MSCD_RS00310;Name=MSCD_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00310;old_locus_tag=MSCd_0510
NZ_LAUX01000012.1	Protein Homology	CDS	5137	7005	.	-	0	ID=cds-WP_015545443.1;Parent=gene-MSCD_RS00310;Dbxref=GenBank:WP_015545443.1;Name=WP_015545443.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545443.1;locus_tag=MSCD_RS00310;product=ATP-binding cassette domain-containing protein;protein_id=WP_015545443.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	7007	8707	.	-	.	ID=gene-MSCD_RS00315;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=MSCD_RS00315;old_locus_tag=MSCd_0520
NZ_LAUX01000012.1	Protein Homology	CDS	7007	8707	.	-	0	ID=cds-WP_011166384.1;Parent=gene-MSCD_RS00315;Dbxref=GenBank:WP_011166384.1;Name=WP_011166384.1;Ontology_term=GO:0006810,GO:0042626;gbkey=CDS;gene=oppD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269182.1;locus_tag=MSCD_RS00315;product=oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_011166384.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	8721	9731	.	-	.	ID=gene-MSCD_RS00320;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=MSCD_RS00320;old_locus_tag=MSCd_0530
NZ_LAUX01000012.1	Protein Homology	CDS	8721	9731	.	-	0	ID=cds-WP_011166383.1;Parent=gene-MSCD_RS00320;Dbxref=GenBank:WP_011166383.1;Name=WP_011166383.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=oppC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166383.1;locus_tag=MSCD_RS00320;product=oligopeptide ABC transporter permease OppC;protein_id=WP_011166383.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	9747	10991	.	-	.	ID=gene-MSCD_RS00325;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=MSCD_RS00325;old_locus_tag=MSCd_0540
NZ_LAUX01000012.1	Protein Homology	CDS	9747	10991	.	-	0	ID=cds-WP_011166382.1;Parent=gene-MSCD_RS00325;Dbxref=GenBank:WP_011166382.1;Name=WP_011166382.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=oppB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862548.1;locus_tag=MSCD_RS00325;product=oligopeptide ABC transporter permease OppB;protein_id=WP_011166382.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	11206	11700	.	+	.	ID=gene-MSCD_RS00330;Name=MSCD_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00330;old_locus_tag=MSCd_0550
NZ_LAUX01000012.1	Protein Homology	CDS	11206	11700	.	+	0	ID=cds-WP_011166381.1;Parent=gene-MSCD_RS00330;Dbxref=GenBank:WP_011166381.1;Name=WP_011166381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698022.1;locus_tag=MSCD_RS00330;product=M48 family metallopeptidase;protein_id=WP_011166381.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	11772	14462	.	+	.	ID=gene-MSCD_RS00335;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=MSCD_RS00335;old_locus_tag=MSCd_0560
NZ_LAUX01000012.1	Protein Homology	CDS	11772	14462	.	+	0	ID=cds-WP_107682061.1;Parent=gene-MSCD_RS00335;Dbxref=GenBank:WP_107682061.1;Name=WP_107682061.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862547.1;locus_tag=MSCD_RS00335;product=alanine--tRNA ligase;protein_id=WP_107682061.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	14568	15872	.	+	.	ID=gene-MSCD_RS00340;Name=MSCD_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00340;old_locus_tag=MSCd_0570
NZ_LAUX01000012.1	Protein Homology	CDS	14568	15872	.	+	0	ID=cds-WP_011166379.1;Parent=gene-MSCD_RS00340;Dbxref=GenBank:WP_011166379.1;Name=WP_011166379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166379.1;locus_tag=MSCD_RS00340;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166379.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	16082	16678	.	+	.	ID=gene-MSCD_RS00345;Name=MSCD_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00345;old_locus_tag=MSCd_0580
NZ_LAUX01000012.1	Protein Homology	CDS	16082	16678	.	+	0	ID=cds-WP_015545367.1;Parent=gene-MSCD_RS00345;Dbxref=GenBank:WP_015545367.1;Name=WP_015545367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545367.1;locus_tag=MSCD_RS00345;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_015545367.1;transl_table=4
NZ_LAUX01000012.1	RefSeq	gene	16765	17517	.	+	.	ID=gene-MSCD_RS00350;Name=MSCD_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00350;old_locus_tag=MSCd_0590
NZ_LAUX01000012.1	Protein Homology	CDS	16765	17517	.	+	0	ID=cds-WP_230592171.1;Parent=gene-MSCD_RS00350;Dbxref=GenBank:WP_230592171.1;Name=WP_230592171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166377.1;locus_tag=MSCD_RS00350;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_230592171.1;transl_table=4
##sequence-region NZ_LAUX01000013.1 1 2282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000013.1	RefSeq	region	1	2282	.	+	.	ID=NZ_LAUX01000013.1:1..2282;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000013.1	RefSeq	pseudogene	32	2163	.	-	.	ID=gene-MSCD_RS05730;Name=MSCD_RS05730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05730;pseudo=true
NZ_LAUX01000013.1	Protein Homology	CDS	32	2163	.	-	0	ID=cds-MSCD_RS05730;Parent=gene-MSCD_RS05730;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_265493187.1;locus_tag=MSCD_RS05730;product=MAG6410 family transglutaminase-related lipoprotein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000014.1 1 4400
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000014.1	RefSeq	region	1	4400	.	+	.	ID=NZ_LAUX01000014.1:1..4400;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000014.1	RefSeq	gene	970	2325	.	-	.	ID=gene-MSCD_RS00370;Name=MSCD_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00370;old_locus_tag=MSCd_0620
NZ_LAUX01000014.1	Protein Homology	CDS	970	2325	.	-	0	ID=cds-WP_011166365.1;Parent=gene-MSCD_RS00370;Dbxref=GenBank:WP_011166365.1;Name=WP_011166365.1;Ontology_term=GO:0019538,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862541.1;locus_tag=MSCD_RS00370;product=M17 family metallopeptidase;protein_id=WP_011166365.1;transl_table=4
NZ_LAUX01000014.1	RefSeq	gene	2478	4400	.	-	.	ID=gene-MSCD_RS00375;Name=MSCD_RS00375;end_range=4400,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00375;partial=true
NZ_LAUX01000014.1	Protein Homology	CDS	2478	4400	.	-	0	ID=cds-WP_107682062.1;Parent=gene-MSCD_RS00375;Dbxref=GenBank:WP_107682062.1;Name=WP_107682062.1;Ontology_term=GO:0005975,GO:0004553;end_range=4400,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862540.1;locus_tag=MSCD_RS00375;partial=true;product=glycoside hydrolase family 31 protein;protein_id=WP_107682062.1;transl_table=4
##sequence-region NZ_LAUX01000015.1 1 18232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000015.1	RefSeq	region	1	18232	.	+	.	ID=NZ_LAUX01000015.1:1..18232;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000015.1	RefSeq	pseudogene	1	361	.	-	.	ID=gene-MSCD_RS00380;Name=MSCD_RS00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00380;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000015.1	Protein Homology	CDS	1	361	.	-	0	ID=cds-MSCD_RS00380;Parent=gene-MSCD_RS00380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862540.1;locus_tag=MSCD_RS00380;partial=true;product=alpha-xylosidase;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000015.1	RefSeq	pseudogene	345	2216	.	-	.	ID=gene-MSCD_RS05620;Name=MSCD_RS05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05620;pseudo=true
NZ_LAUX01000015.1	Protein Homology	CDS	345	2216	.	-	0	ID=cds-MSCD_RS05620;Parent=gene-MSCD_RS05620;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698029.1;locus_tag=MSCD_RS05620;product=PTS transporter subunit EIIC;pseudo=true;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	2352	3539	.	-	.	ID=gene-MSCD_RS00390;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=MSCD_RS00390;old_locus_tag=MSCd_0670
NZ_LAUX01000015.1	Protein Homology	CDS	2352	3539	.	-	0	ID=cds-WP_011166362.1;Parent=gene-MSCD_RS00390;Dbxref=GenBank:WP_011166362.1;Name=WP_011166362.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004428385.1;locus_tag=MSCD_RS00390;product=elongation factor Tu;protein_id=WP_011166362.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	3671	5740	.	-	.	ID=gene-MSCD_RS00395;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=MSCD_RS00395;old_locus_tag=MSCd_0680
NZ_LAUX01000015.1	Protein Homology	CDS	3671	5740	.	-	0	ID=cds-WP_011166361.1;Parent=gene-MSCD_RS00395;Dbxref=GenBank:WP_011166361.1;Name=WP_011166361.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447517.1;locus_tag=MSCD_RS00395;product=elongation factor G;protein_id=WP_011166361.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	5765	6232	.	-	.	ID=gene-MSCD_RS00400;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=MSCD_RS00400;old_locus_tag=MSCd_0690
NZ_LAUX01000015.1	Protein Homology	CDS	5765	6232	.	-	0	ID=cds-WP_011166360.1;Parent=gene-MSCD_RS00400;Dbxref=GenBank:WP_011166360.1;Name=WP_011166360.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035361.1;locus_tag=MSCD_RS00400;product=30S ribosomal protein S7;protein_id=WP_011166360.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	6319	6738	.	-	.	ID=gene-MSCD_RS00405;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=MSCD_RS00405;old_locus_tag=MSCd_0700
NZ_LAUX01000015.1	Protein Homology	CDS	6319	6738	.	-	0	ID=cds-WP_008362393.1;Parent=gene-MSCD_RS00405;Dbxref=GenBank:WP_008362393.1;Name=WP_008362393.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362393.1;locus_tag=MSCD_RS00405;product=30S ribosomal protein S12;protein_id=WP_008362393.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	6862	8391	.	-	.	ID=gene-MSCD_RS00410;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=MSCD_RS00410;old_locus_tag=MSCd_0710
NZ_LAUX01000015.1	Protein Homology	CDS	6862	8391	.	-	0	ID=cds-WP_011166358.1;Parent=gene-MSCD_RS00410;Dbxref=GenBank:WP_011166358.1;Name=WP_011166358.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269171.1;locus_tag=MSCD_RS00410;product=cardiolipin synthase;protein_id=WP_011166358.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	8391	9098	.	-	.	ID=gene-MSCD_RS00415;Name=MSCD_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00415;old_locus_tag=MSCd_0720
NZ_LAUX01000015.1	Protein Homology	CDS	8391	9098	.	-	0	ID=cds-WP_011166357.1;Parent=gene-MSCD_RS00415;Dbxref=GenBank:WP_011166357.1;Name=WP_011166357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862537.1;locus_tag=MSCD_RS00415;product=hypothetical protein;protein_id=WP_011166357.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	9327	10241	.	-	.	ID=gene-MSCD_RS00420;Name=MSCD_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00420;old_locus_tag=MSCd_0730
NZ_LAUX01000015.1	Protein Homology	CDS	9327	10241	.	-	0	ID=cds-WP_015545586.1;Parent=gene-MSCD_RS00420;Dbxref=GenBank:WP_015545586.1;Name=WP_015545586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862536.1;locus_tag=MSCD_RS00420;product=hypothetical protein;protein_id=WP_015545586.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	10354	10854	.	-	.	ID=gene-MSCD_RS00425;Name=MSCD_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00425;old_locus_tag=MSCd_0740
NZ_LAUX01000015.1	Protein Homology	CDS	10354	10854	.	-	0	ID=cds-WP_011166355.1;Parent=gene-MSCD_RS00425;Dbxref=GenBank:WP_011166355.1;Name=WP_011166355.1;Ontology_term=GO:0000166,GO:0003725,GO:0005524,GO:0061710;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362382.1;locus_tag=MSCD_RS00425;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_011166355.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	10863	12335	.	-	.	ID=gene-MSCD_RS00430;Name=MSCD_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00430;old_locus_tag=MSCd_0750
NZ_LAUX01000015.1	Protein Homology	CDS	10863	12335	.	-	0	ID=cds-WP_011166354.1;Parent=gene-MSCD_RS00430;Dbxref=GenBank:WP_011166354.1;Name=WP_011166354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729289.1;locus_tag=MSCD_RS00430;product=hypothetical protein;protein_id=WP_011166354.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	12344	13192	.	-	.	ID=gene-MSCD_RS00435;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=MSCD_RS00435;old_locus_tag=MSCd_0760
NZ_LAUX01000015.1	Protein Homology	CDS	12344	13192	.	-	0	ID=cds-WP_015545566.1;Parent=gene-MSCD_RS00435;Dbxref=GenBank:WP_015545566.1;Name=WP_015545566.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729288.1;locus_tag=MSCD_RS00435;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_015545566.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	13185	14279	.	-	.	ID=gene-MSCD_RS00440;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=MSCD_RS00440;old_locus_tag=MSCd_0770
NZ_LAUX01000015.1	Protein Homology	CDS	13185	14279	.	-	0	ID=cds-WP_011166352.1;Parent=gene-MSCD_RS00440;Dbxref=GenBank:WP_011166352.1;Name=WP_011166352.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387040.1;locus_tag=MSCD_RS00440;product=peptide chain release factor 1;protein_id=WP_011166352.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	14282	14911	.	-	.	ID=gene-MSCD_RS00445;Name=MSCD_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00445;old_locus_tag=MSCd_0780
NZ_LAUX01000015.1	Protein Homology	CDS	14282	14911	.	-	0	ID=cds-WP_015545523.1;Parent=gene-MSCD_RS00445;Dbxref=GenBank:WP_015545523.1;Name=WP_015545523.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698038.1;locus_tag=MSCD_RS00445;product=thymidine kinase;protein_id=WP_015545523.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	14913	15863	.	-	.	ID=gene-MSCD_RS00450;Name=MSCD_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00450;old_locus_tag=MSCd_0790
NZ_LAUX01000015.1	Protein Homology	CDS	14913	15863	.	-	0	ID=cds-WP_011166350.1;Parent=gene-MSCD_RS00450;Dbxref=GenBank:WP_011166350.1;Name=WP_011166350.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862531.1;locus_tag=MSCD_RS00450;product=DHH family phosphoesterase;protein_id=WP_011166350.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	15873	17771	.	-	.	ID=gene-MSCD_RS00455;Name=MSCD_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00455;old_locus_tag=MSCd_0800
NZ_LAUX01000015.1	Protein Homology	CDS	15873	17771	.	-	0	ID=cds-WP_015545339.1;Parent=gene-MSCD_RS00455;Dbxref=GenBank:WP_015545339.1;Name=WP_015545339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545339.1;locus_tag=MSCD_RS00455;product=hypothetical protein;protein_id=WP_015545339.1;transl_table=4
NZ_LAUX01000015.1	RefSeq	gene	17844	18122	.	-	.	ID=gene-MSCD_RS00460;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=MSCD_RS00460;old_locus_tag=MSCd_0810
NZ_LAUX01000015.1	Protein Homology	CDS	17844	18122	.	-	0	ID=cds-WP_011166348.1;Parent=gene-MSCD_RS00460;Dbxref=GenBank:WP_011166348.1;Name=WP_011166348.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862529.1;locus_tag=MSCD_RS00460;product=50S ribosomal protein L31;protein_id=WP_011166348.1;transl_table=4
##sequence-region NZ_LAUX01000016.1 1 2841
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000016.1	RefSeq	region	1	2841	.	+	.	ID=NZ_LAUX01000016.1:1..2841;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000016.1	RefSeq	gene	10	714	.	-	.	ID=gene-MSCD_RS00465;Name=MSCD_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00465;old_locus_tag=MSCd_0820
NZ_LAUX01000016.1	Protein Homology	CDS	10	714	.	-	0	ID=cds-WP_015545283.1;Parent=gene-MSCD_RS00465;Dbxref=GenBank:WP_015545283.1;Name=WP_015545283.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545283.1;locus_tag=MSCD_RS00465;product=glycerophosphodiester phosphodiesterase;protein_id=WP_015545283.1;transl_table=4
NZ_LAUX01000016.1	RefSeq	pseudogene	1308	2806	.	+	.	ID=gene-MSCD_RS00470;Name=MSCD_RS00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00470;old_locus_tag=MSCd_0840;pseudo=true
NZ_LAUX01000016.1	Protein Homology	CDS	1308	2806	.	+	0	ID=cds-MSCD_RS00470;Parent=gene-MSCD_RS00470;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584429.1;locus_tag=MSCD_RS00470;product=MFS transporter;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000017.1 1 2421
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000017.1	RefSeq	region	1	2421	.	+	.	ID=NZ_LAUX01000017.1:1..2421;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000017.1	RefSeq	gene	220	537	.	-	.	ID=gene-MSCD_RS05150;Name=MSCD_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05150;old_locus_tag=MSCd_0850
NZ_LAUX01000017.1	Protein Homology	CDS	220	537	.	-	0	ID=cds-WP_011166940.1;Parent=gene-MSCD_RS05150;Dbxref=GenBank:WP_011166940.1;Name=WP_011166940.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=MSCD_RS05150;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166940.1;transl_table=4
NZ_LAUX01000017.1	RefSeq	gene	543	1076	.	-	.	ID=gene-MSCD_RS05155;Name=MSCD_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05155;old_locus_tag=MSCd_0860
NZ_LAUX01000017.1	Protein Homology	CDS	543	1076	.	-	0	ID=cds-WP_011166941.1;Parent=gene-MSCD_RS05155;Dbxref=GenBank:WP_011166941.1;Name=WP_011166941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166941.1;locus_tag=MSCD_RS05155;product=hypothetical protein;protein_id=WP_011166941.1;transl_table=4
NZ_LAUX01000017.1	RefSeq	gene	1118	1378	.	-	.	ID=gene-MSCD_RS05735;Name=MSCD_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05735
NZ_LAUX01000017.1	Protein Homology	CDS	1118	1378	.	-	0	ID=cds-WP_394296902.1;Parent=gene-MSCD_RS05735;Dbxref=GenBank:WP_394296902.1;Name=WP_394296902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045726.2;locus_tag=MSCD_RS05735;product=Vmc-like lipoprotein signal peptide domain-containing protein;protein_id=WP_394296902.1;transl_table=4
NZ_LAUX01000017.1	RefSeq	gene	1410	2339	.	-	.	ID=gene-MSCD_RS00485;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=MSCD_RS00485;old_locus_tag=MSCd_0870
NZ_LAUX01000017.1	Protein Homology	CDS	1410	2339	.	-	0	ID=cds-WP_011166942.1;Parent=gene-MSCD_RS00485;Dbxref=GenBank:WP_011166942.1;Name=WP_011166942.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862923.1;locus_tag=MSCD_RS00485;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_011166942.1;transl_table=4
##sequence-region NZ_LAUX01000136.1 1 1598
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000136.1	RefSeq	region	1	1598	.	+	.	ID=NZ_LAUX01000136.1:1..1598;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000136.1	RefSeq	gene	1	595	.	+	.	ID=gene-MSCD_RS04510;Name=MSCD_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04510;partial=true;start_range=.,1
NZ_LAUX01000136.1	Protein Homology	CDS	1	595	.	+	1	ID=cds-WP_465100996.1;Parent=gene-MSCD_RS04510;Dbxref=GenBank:WP_465100996.1;Name=WP_465100996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363915.1;locus_tag=MSCD_RS04510;partial=true;product=AAA family ATPase;protein_id=WP_465100996.1;start_range=.,1;transl_table=4
NZ_LAUX01000136.1	RefSeq	pseudogene	622	812	.	-	.	ID=gene-MSCD_RS05795;Name=MSCD_RS05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05795;partial=true;pseudo=true;start_range=.,622
NZ_LAUX01000136.1	Protein Homology	CDS	622	812	.	-	0	ID=cds-MSCD_RS05795;Parent=gene-MSCD_RS05795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_265510105.1;locus_tag=MSCD_RS05795;partial=true;product=hypothetical protein;pseudo=true;start_range=.,622;transl_table=4
NZ_LAUX01000136.1	RefSeq	gene	850	1598	.	-	.	ID=gene-MSCD_RS04520;Name=MSCD_RS04520;end_range=1598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04520;partial=true
NZ_LAUX01000136.1	Protein Homology	CDS	850	1598	.	-	2	ID=cds-WP_146149238.1;Parent=gene-MSCD_RS04520;Dbxref=GenBank:WP_146149238.1;Name=WP_146149238.1;Ontology_term=GO:0009897;end_range=1598,.;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862725.1;locus_tag=MSCD_RS04520;partial=true;product=MOLPALP family lipoprotein;protein_id=WP_146149238.1;transl_table=4
##sequence-region NZ_LAUX01000018.1 1 5202
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000018.1	RefSeq	region	1	5202	.	+	.	ID=NZ_LAUX01000018.1:1..5202;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000018.1	RefSeq	gene	1	388	.	+	.	ID=gene-MSCD_RS00490;Name=MSCD_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00490;partial=true;start_range=.,1
NZ_LAUX01000018.1	Protein Homology	CDS	1	388	.	+	1	ID=cds-WP_416371521.1;Parent=gene-MSCD_RS00490;Dbxref=GenBank:WP_416371521.1;Name=WP_416371521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862926.1;locus_tag=MSCD_RS00490;partial=true;product=MAG4940 family membrane protein;protein_id=WP_416371521.1;start_range=.,1;transl_table=4
NZ_LAUX01000018.1	RefSeq	gene	397	2745	.	+	.	ID=gene-MSCD_RS00495;Name=MSCD_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00495;old_locus_tag=MSCd_0880
NZ_LAUX01000018.1	Protein Homology	CDS	397	2745	.	+	0	ID=cds-WP_011166944.1;Parent=gene-MSCD_RS00495;Dbxref=GenBank:WP_011166944.1;Name=WP_011166944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_278308000.1;locus_tag=MSCD_RS00495;product=MSC_0775 family lipoprotein;protein_id=WP_011166944.1;transl_table=4
NZ_LAUX01000018.1	RefSeq	gene	2993	5176	.	+	.	ID=gene-MSCD_RS00500;Name=MSCD_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00500;old_locus_tag=MSCd_0890
NZ_LAUX01000018.1	Protein Homology	CDS	2993	5176	.	+	0	ID=cds-WP_011166943.1;Parent=gene-MSCD_RS00500;Dbxref=GenBank:WP_011166943.1;Name=WP_011166943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_265498390.1;locus_tag=MSCD_RS00500;product=MSC_0775 family lipoprotein;protein_id=WP_011166943.1;transl_table=4
##sequence-region NZ_LAUX01000019.1 1 13493
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000019.1	RefSeq	region	1	13493	.	+	.	ID=NZ_LAUX01000019.1:1..13493;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000019.1	RefSeq	gene	89	1045	.	+	.	ID=gene-MSCD_RS00505;Name=MSCD_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00505;old_locus_tag=MSCd_0900
NZ_LAUX01000019.1	Protein Homology	CDS	89	1045	.	+	0	ID=cds-WP_011166939.1;Parent=gene-MSCD_RS00505;Dbxref=GenBank:WP_011166939.1;Name=WP_011166939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166939.1;locus_tag=MSCD_RS00505;product=glycosyltransferase family A protein;protein_id=WP_011166939.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	1045	1800	.	+	.	ID=gene-MSCD_RS00510;Name=MSCD_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00510;old_locus_tag=MSCd_0910
NZ_LAUX01000019.1	Protein Homology	CDS	1045	1800	.	+	0	ID=cds-WP_011166938.1;Parent=gene-MSCD_RS00510;Dbxref=GenBank:WP_011166938.1;Name=WP_011166938.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729819.1;locus_tag=MSCD_RS00510;product=RDD family protein;protein_id=WP_011166938.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	1817	3985	.	+	.	ID=gene-MSCD_RS00515;Name=MSCD_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00515;old_locus_tag=MSCd_0920
NZ_LAUX01000019.1	Protein Homology	CDS	1817	3985	.	+	0	ID=cds-WP_011166937.1;Parent=gene-MSCD_RS00515;Dbxref=GenBank:WP_011166937.1;Name=WP_011166937.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862919.1;locus_tag=MSCD_RS00515;product=ATP-dependent helicase;protein_id=WP_011166937.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	4050	4319	.	+	.	ID=gene-MSCD_RS00520;Name=MSCD_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00520;old_locus_tag=MSCd_0930
NZ_LAUX01000019.1	Protein Homology	CDS	4050	4319	.	+	0	ID=cds-WP_011166936.1;Parent=gene-MSCD_RS00520;Dbxref=GenBank:WP_011166936.1;Name=WP_011166936.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862918.1;locus_tag=MSCD_RS00520;product=HPr family phosphocarrier protein;protein_id=WP_011166936.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	4376	5344	.	+	.	ID=gene-MSCD_RS00525;Name=MSCD_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00525;old_locus_tag=MSCd_0940
NZ_LAUX01000019.1	Protein Homology	CDS	4376	5344	.	+	0	ID=cds-WP_011166935.1;Parent=gene-MSCD_RS00525;Dbxref=GenBank:WP_011166935.1;Name=WP_011166935.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862917.1;locus_tag=MSCD_RS00525;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_011166935.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	5347	6255	.	+	.	ID=gene-MSCD_RS00530;Name=MSCD_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00530;old_locus_tag=MSCd_0950
NZ_LAUX01000019.1	Protein Homology	CDS	5347	6255	.	+	0	ID=cds-WP_011166934.1;Parent=gene-MSCD_RS00530;Dbxref=GenBank:WP_011166934.1;Name=WP_011166934.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729815.1;locus_tag=MSCD_RS00530;product=RluA family pseudouridine synthase;protein_id=WP_011166934.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	6258	8279	.	+	.	ID=gene-MSCD_RS00535;Name=MSCD_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00535;old_locus_tag=MSCd_0960
NZ_LAUX01000019.1	Protein Homology	CDS	6258	8279	.	+	0	ID=cds-WP_011166933.1;Parent=gene-MSCD_RS00535;Dbxref=GenBank:WP_011166933.1;Name=WP_011166933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166933.1;locus_tag=MSCD_RS00535;product=hypothetical protein;protein_id=WP_011166933.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	8283	10289	.	+	.	ID=gene-MSCD_RS00540;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=MSCD_RS00540;old_locus_tag=MSCd_0970
NZ_LAUX01000019.1	Protein Homology	CDS	8283	10289	.	+	0	ID=cds-WP_011166932.1;Parent=gene-MSCD_RS00540;Dbxref=GenBank:WP_011166932.1;Name=WP_011166932.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698316.1;locus_tag=MSCD_RS00540;product=NAD-dependent DNA ligase LigA;protein_id=WP_011166932.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	10291	10587	.	+	.	ID=gene-MSCD_RS00545;Name=MSCD_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00545;old_locus_tag=MSCd_0980
NZ_LAUX01000019.1	Protein Homology	CDS	10291	10587	.	+	0	ID=cds-WP_107682063.1;Parent=gene-MSCD_RS00545;Dbxref=GenBank:WP_107682063.1;Name=WP_107682063.1;Ontology_term=GO:0006450,GO:0005524,GO:0050567;gbkey=CDS;go_function=ATP binding|0005524||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387555.1;locus_tag=MSCD_RS00545;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_107682063.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	10587	12044	.	+	.	ID=gene-MSCD_RS00550;Name=MSCD_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00550;old_locus_tag=MSCd_0990
NZ_LAUX01000019.1	Protein Homology	CDS	10587	12044	.	+	0	ID=cds-WP_011166930.1;Parent=gene-MSCD_RS00550;Dbxref=GenBank:WP_011166930.1;Name=WP_011166930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862913.1;locus_tag=MSCD_RS00550;product=amidase family protein;protein_id=WP_011166930.1;transl_table=4
NZ_LAUX01000019.1	RefSeq	gene	12046	13485	.	+	.	ID=gene-MSCD_RS00555;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=MSCD_RS00555;old_locus_tag=MSCd_1000
NZ_LAUX01000019.1	Protein Homology	CDS	12046	13485	.	+	0	ID=cds-WP_015545356.1;Parent=gene-MSCD_RS00555;Dbxref=GenBank:WP_015545356.1;Name=WP_015545356.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862912.1;locus_tag=MSCD_RS00555;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_015545356.1;transl_table=4
##sequence-region NZ_LAUX01000020.1 1 27658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000020.1	RefSeq	region	1	27658	.	+	.	ID=NZ_LAUX01000020.1:1..27658;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000020.1	RefSeq	gene	16	741	.	-	.	ID=gene-MSCD_RS00560;Name=MSCD_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00560;old_locus_tag=MSCd_1010
NZ_LAUX01000020.1	Protein Homology	CDS	16	741	.	-	0	ID=cds-WP_011166928.1;Parent=gene-MSCD_RS00560;Dbxref=GenBank:WP_011166928.1;Name=WP_011166928.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166928.1;locus_tag=MSCD_RS00560;product=potassium channel family protein;protein_id=WP_011166928.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	820	2421	.	+	.	ID=gene-MSCD_RS00565;Name=MSCD_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00565;old_locus_tag=MSCd_1020
NZ_LAUX01000020.1	Protein Homology	CDS	820	2421	.	+	0	ID=cds-WP_015545563.1;Parent=gene-MSCD_RS00565;Dbxref=GenBank:WP_015545563.1;Name=WP_015545563.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387551.1;locus_tag=MSCD_RS00565;product=potassium transporter TrkG;protein_id=WP_015545563.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	2430	3296	.	+	.	ID=gene-MSCD_RS00570;Name=MSCD_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00570;old_locus_tag=MSCd_1030
NZ_LAUX01000020.1	Protein Homology	CDS	2430	3296	.	+	0	ID=cds-WP_015545610.1;Parent=gene-MSCD_RS00570;Dbxref=GenBank:WP_015545610.1;Name=WP_015545610.1;Ontology_term=GO:0006164,GO:0006730,GO:0071265,GO:0003824,GO:0004488,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA,hydrolase activity|0016787||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,one-carbon metabolic process|0006730||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447977.1;locus_tag=MSCD_RS00570;product=bifunctional 5%2C10-methylenetetrahydrofolate dehydrogenase/5%2C10-methenyltetrahydrofolate cyclohydrolase;protein_id=WP_015545610.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	3286	4047	.	+	.	ID=gene-MSCD_RS00575;Name=MSCD_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00575;old_locus_tag=MSCd_1040
NZ_LAUX01000020.1	Protein Homology	CDS	3286	4047	.	+	0	ID=cds-WP_011166925.1;Parent=gene-MSCD_RS00575;Dbxref=GenBank:WP_011166925.1;Name=WP_011166925.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862909.1;locus_tag=MSCD_RS00575;product=tetraspanin family protein;protein_id=WP_011166925.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	4573	5121	.	+	.	ID=gene-MSCD_RS05165;Name=MSCD_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05165;old_locus_tag=MSCd_1050
NZ_LAUX01000020.1	Protein Homology	CDS	4573	5121	.	+	0	ID=cds-WP_011166923.1;Parent=gene-MSCD_RS05165;Dbxref=GenBank:WP_011166923.1;Name=WP_011166923.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=MSCD_RS05165;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166923.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	5222	5297	.	+	.	ID=gene-MSCD_RS00590;Name=MSCD_RS00590;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00590;old_locus_tag=MSCd_1060
NZ_LAUX01000020.1	tRNAscan-SE	tRNA	5222	5297	.	+	.	ID=rna-MSCD_RS00590;Parent=gene-MSCD_RS00590;anticodon=(pos:5255..5257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00590;product=tRNA-Asn
NZ_LAUX01000020.1	tRNAscan-SE	exon	5222	5297	.	+	.	ID=exon-MSCD_RS00590-1;Parent=rna-MSCD_RS00590;anticodon=(pos:5255..5257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00590;product=tRNA-Asn
NZ_LAUX01000020.1	RefSeq	gene	5305	5380	.	+	.	ID=gene-MSCD_RS00595;Name=MSCD_RS00595;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00595;old_locus_tag=MSCd_1070
NZ_LAUX01000020.1	tRNAscan-SE	tRNA	5305	5380	.	+	.	ID=rna-MSCD_RS00595;Parent=gene-MSCD_RS00595;anticodon=(pos:5338..5340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00595;product=tRNA-Glu
NZ_LAUX01000020.1	tRNAscan-SE	exon	5305	5380	.	+	.	ID=exon-MSCD_RS00595-1;Parent=rna-MSCD_RS00595;anticodon=(pos:5338..5340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00595;product=tRNA-Glu
NZ_LAUX01000020.1	RefSeq	gene	5388	5463	.	+	.	ID=gene-MSCD_RS00600;Name=MSCD_RS00600;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00600;old_locus_tag=MSCd_1080
NZ_LAUX01000020.1	tRNAscan-SE	tRNA	5388	5463	.	+	.	ID=rna-MSCD_RS00600;Parent=gene-MSCD_RS00600;anticodon=(pos:5421..5423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00600;product=tRNA-Val
NZ_LAUX01000020.1	tRNAscan-SE	exon	5388	5463	.	+	.	ID=exon-MSCD_RS00600-1;Parent=rna-MSCD_RS00600;anticodon=(pos:5421..5423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00600;product=tRNA-Val
NZ_LAUX01000020.1	RefSeq	gene	5476	5551	.	+	.	ID=gene-MSCD_RS00605;Name=MSCD_RS00605;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00605;old_locus_tag=MSCd_1090
NZ_LAUX01000020.1	tRNAscan-SE	tRNA	5476	5551	.	+	.	ID=rna-MSCD_RS00605;Parent=gene-MSCD_RS00605;anticodon=(pos:5509..5511);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00605;product=tRNA-Thr
NZ_LAUX01000020.1	tRNAscan-SE	exon	5476	5551	.	+	.	ID=exon-MSCD_RS00605-1;Parent=rna-MSCD_RS00605;anticodon=(pos:5509..5511);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00605;product=tRNA-Thr
NZ_LAUX01000020.1	RefSeq	gene	5794	6438	.	-	.	ID=gene-MSCD_RS00610;Name=MSCD_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00610;old_locus_tag=MSCd_1100
NZ_LAUX01000020.1	Protein Homology	CDS	5794	6438	.	-	0	ID=cds-WP_011166922.1;Parent=gene-MSCD_RS00610;Dbxref=GenBank:WP_011166922.1;Name=WP_011166922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166922.1;locus_tag=MSCD_RS00610;product=hypothetical protein;protein_id=WP_011166922.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	6519	6686	.	-	.	ID=gene-MSCD_RS00615;Name=MSCD_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00615
NZ_LAUX01000020.1	Protein Homology	CDS	6519	6686	.	-	0	ID=cds-WP_011166921.1;Parent=gene-MSCD_RS00615;Dbxref=GenBank:WP_011166921.1;Name=WP_011166921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166921.1;locus_tag=MSCD_RS00615;product=hypothetical protein;protein_id=WP_011166921.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	6815	7078	.	+	.	ID=gene-MSCD_RS00620;Name=MSCD_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00620;old_locus_tag=MSCd_1110
NZ_LAUX01000020.1	Protein Homology	CDS	6815	7078	.	+	0	ID=cds-WP_011166920.1;Parent=gene-MSCD_RS00620;Dbxref=GenBank:WP_011166920.1;Name=WP_011166920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166920.1;locus_tag=MSCD_RS00620;product=TIGR04570 family membrane protein;protein_id=WP_011166920.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	7068	8054	.	+	.	ID=gene-MSCD_RS00625;Name=MSCD_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00625;old_locus_tag=MSCd_1120
NZ_LAUX01000020.1	Protein Homology	CDS	7068	8054	.	+	0	ID=cds-WP_045596621.1;Parent=gene-MSCD_RS00625;Dbxref=GenBank:WP_045596621.1;Name=WP_045596621.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545281.1;locus_tag=MSCD_RS00625;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_045596621.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	8119	9666	.	+	.	ID=gene-MSCD_RS00630;Name=MSCD_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00630;old_locus_tag=MSCd_1130
NZ_LAUX01000020.1	Protein Homology	CDS	8119	9666	.	+	0	ID=cds-WP_015545411.1;Parent=gene-MSCD_RS00630;Dbxref=GenBank:WP_015545411.1;Name=WP_015545411.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862905.1;locus_tag=MSCD_RS00630;product=PTS transporter subunit EIIC;protein_id=WP_015545411.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	9674	11302	.	+	.	ID=gene-MSCD_RS00635;Name=MSCD_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00635;old_locus_tag=MSCd_1140
NZ_LAUX01000020.1	Protein Homology	CDS	9674	11302	.	+	0	ID=cds-WP_039275732.1;Parent=gene-MSCD_RS00635;Dbxref=GenBank:WP_039275732.1;Name=WP_039275732.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863094.1;locus_tag=MSCD_RS00635;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_039275732.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	11408	12406	.	+	.	ID=gene-MSCD_RS00640;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=MSCD_RS00640;old_locus_tag=MSCd_1150
NZ_LAUX01000020.1	Protein Homology	CDS	11408	12406	.	+	0	ID=cds-WP_011166915.1;Parent=gene-MSCD_RS00640;Dbxref=GenBank:WP_011166915.1;Name=WP_011166915.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698326.1;locus_tag=MSCD_RS00640;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_011166915.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	12658	12966	.	+	.	ID=gene-MSCD_RS00645;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=MSCD_RS00645;old_locus_tag=MSCd_1160
NZ_LAUX01000020.1	Protein Homology	CDS	12658	12966	.	+	0	ID=cds-WP_011166914.1;Parent=gene-MSCD_RS00645;Dbxref=GenBank:WP_011166914.1;Name=WP_011166914.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362538.1;locus_tag=MSCD_RS00645;product=30S ribosomal protein S10;protein_id=WP_011166914.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	13042	13713	.	+	.	ID=gene-MSCD_RS00650;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=MSCD_RS00650;old_locus_tag=MSCd_1170
NZ_LAUX01000020.1	Protein Homology	CDS	13042	13713	.	+	0	ID=cds-WP_011166913.1;Parent=gene-MSCD_RS00650;Dbxref=GenBank:WP_011166913.1;Name=WP_011166913.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166913.1;locus_tag=MSCD_RS00650;product=50S ribosomal protein L3;protein_id=WP_011166913.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	13726	14352	.	+	.	ID=gene-MSCD_RS00655;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=MSCD_RS00655;old_locus_tag=MSCd_1180
NZ_LAUX01000020.1	Protein Homology	CDS	13726	14352	.	+	0	ID=cds-WP_011166912.1;Parent=gene-MSCD_RS00655;Dbxref=GenBank:WP_011166912.1;Name=WP_011166912.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729795.1;locus_tag=MSCD_RS00655;product=50S ribosomal protein L4;protein_id=WP_011166912.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	14352	14636	.	+	.	ID=gene-MSCD_RS00660;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=MSCD_RS00660;old_locus_tag=MSCd_1190
NZ_LAUX01000020.1	Protein Homology	CDS	14352	14636	.	+	0	ID=cds-WP_011166911.1;Parent=gene-MSCD_RS00660;Dbxref=GenBank:WP_011166911.1;Name=WP_011166911.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269631.1;locus_tag=MSCD_RS00660;product=50S ribosomal protein L23;protein_id=WP_011166911.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	14691	15539	.	+	.	ID=gene-MSCD_RS00665;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=MSCD_RS00665;old_locus_tag=MSCd_1200
NZ_LAUX01000020.1	Protein Homology	CDS	14691	15539	.	+	0	ID=cds-WP_011166910.1;Parent=gene-MSCD_RS00665;Dbxref=GenBank:WP_011166910.1;Name=WP_011166910.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362531.1;locus_tag=MSCD_RS00665;product=50S ribosomal protein L2;protein_id=WP_011166910.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	15561	15827	.	+	.	ID=gene-MSCD_RS00670;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=MSCD_RS00670;old_locus_tag=MSCd_1210
NZ_LAUX01000020.1	Protein Homology	CDS	15561	15827	.	+	0	ID=cds-WP_011166909.1;Parent=gene-MSCD_RS00670;Dbxref=GenBank:WP_011166909.1;Name=WP_011166909.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166909.1;locus_tag=MSCD_RS00670;product=30S ribosomal protein S19;protein_id=WP_011166909.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	15851	16186	.	+	.	ID=gene-MSCD_RS00675;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=MSCD_RS00675;old_locus_tag=MSCd_1220
NZ_LAUX01000020.1	Protein Homology	CDS	15851	16186	.	+	0	ID=cds-WP_107682064.1;Parent=gene-MSCD_RS00675;Dbxref=GenBank:WP_107682064.1;Name=WP_107682064.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362527.1;locus_tag=MSCD_RS00675;product=50S ribosomal protein L22;protein_id=WP_107682064.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	16204	16905	.	+	.	ID=gene-MSCD_RS00680;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=MSCD_RS00680;old_locus_tag=MSCd_1230
NZ_LAUX01000020.1	Protein Homology	CDS	16204	16905	.	+	0	ID=cds-WP_011166907.1;Parent=gene-MSCD_RS00680;Dbxref=GenBank:WP_011166907.1;Name=WP_011166907.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166907.1;locus_tag=MSCD_RS00680;product=30S ribosomal protein S3;protein_id=WP_011166907.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	16908	17321	.	+	.	ID=gene-MSCD_RS00685;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=MSCD_RS00685;old_locus_tag=MSCd_1240
NZ_LAUX01000020.1	Protein Homology	CDS	16908	17321	.	+	0	ID=cds-WP_011387540.1;Parent=gene-MSCD_RS00685;Dbxref=GenBank:WP_011387540.1;Name=WP_011387540.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166906.1;locus_tag=MSCD_RS00685;product=50S ribosomal protein L16;protein_id=WP_011387540.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	17321	17737	.	+	.	ID=gene-MSCD_RS00690;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=MSCD_RS00690;old_locus_tag=MSCd_1250
NZ_LAUX01000020.1	Protein Homology	CDS	17321	17737	.	+	0	ID=cds-WP_011166905.1;Parent=gene-MSCD_RS00690;Dbxref=GenBank:WP_011166905.1;Name=WP_011166905.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387539.1;locus_tag=MSCD_RS00690;product=50S ribosomal protein L29;protein_id=WP_011166905.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	17737	17994	.	+	.	ID=gene-MSCD_RS00695;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=MSCD_RS00695;old_locus_tag=MSCd_1260
NZ_LAUX01000020.1	Protein Homology	CDS	17737	17994	.	+	0	ID=cds-WP_011166904.1;Parent=gene-MSCD_RS00695;Dbxref=GenBank:WP_011166904.1;Name=WP_011166904.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587539.1;locus_tag=MSCD_RS00695;product=30S ribosomal protein S17;protein_id=WP_011166904.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	18010	18378	.	+	.	ID=gene-MSCD_RS00700;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=MSCD_RS00700;old_locus_tag=MSCd_1270
NZ_LAUX01000020.1	Protein Homology	CDS	18010	18378	.	+	0	ID=cds-WP_011166903.1;Parent=gene-MSCD_RS00700;Dbxref=GenBank:WP_011166903.1;Name=WP_011166903.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429034.1;locus_tag=MSCD_RS00700;product=50S ribosomal protein L14;protein_id=WP_011166903.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	18392	18718	.	+	.	ID=gene-MSCD_RS00705;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=MSCD_RS00705;old_locus_tag=MSCd_1280
NZ_LAUX01000020.1	Protein Homology	CDS	18392	18718	.	+	0	ID=cds-WP_011166902.1;Parent=gene-MSCD_RS00705;Dbxref=GenBank:WP_011166902.1;Name=WP_011166902.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269628.1;locus_tag=MSCD_RS00705;product=50S ribosomal protein L24;protein_id=WP_011166902.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	18737	19279	.	+	.	ID=gene-MSCD_RS00710;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=MSCD_RS00710;old_locus_tag=MSCd_1290
NZ_LAUX01000020.1	Protein Homology	CDS	18737	19279	.	+	0	ID=cds-WP_011166900.1;Parent=gene-MSCD_RS00710;Dbxref=GenBank:WP_011166900.1;Name=WP_011166900.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387537.1;locus_tag=MSCD_RS00710;product=50S ribosomal protein L5;protein_id=WP_011166900.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	19298	19483	.	+	.	ID=gene-MSCD_RS00715;Name=MSCD_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00715;old_locus_tag=MSCd_1300
NZ_LAUX01000020.1	Protein Homology	CDS	19298	19483	.	+	0	ID=cds-WP_008362512.1;Parent=gene-MSCD_RS00715;Dbxref=GenBank:WP_008362512.1;Name=WP_008362512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183033.1;locus_tag=MSCD_RS00715;product=type Z 30S ribosomal protein S14;protein_id=WP_008362512.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	19503	19892	.	+	.	ID=gene-MSCD_RS00720;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=MSCD_RS00720;old_locus_tag=MSCd_1310
NZ_LAUX01000020.1	Protein Homology	CDS	19503	19892	.	+	0	ID=cds-WP_013729790.1;Parent=gene-MSCD_RS00720;Dbxref=GenBank:WP_013729790.1;Name=WP_013729790.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362508.1;locus_tag=MSCD_RS00720;product=30S ribosomal protein S8;protein_id=WP_013729790.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	19906	20448	.	+	.	ID=gene-MSCD_RS00725;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=MSCD_RS00725;old_locus_tag=MSCd_1320
NZ_LAUX01000020.1	Protein Homology	CDS	19906	20448	.	+	0	ID=cds-WP_011166898.1;Parent=gene-MSCD_RS00725;Dbxref=GenBank:WP_011166898.1;Name=WP_011166898.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269626.1;locus_tag=MSCD_RS00725;product=50S ribosomal protein L6;protein_id=WP_011166898.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	20474	20824	.	+	.	ID=gene-MSCD_RS00730;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=MSCD_RS00730;old_locus_tag=MSCd_1330
NZ_LAUX01000020.1	Protein Homology	CDS	20474	20824	.	+	0	ID=cds-WP_011166897.1;Parent=gene-MSCD_RS00730;Dbxref=GenBank:WP_011166897.1;Name=WP_011166897.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387535.1;locus_tag=MSCD_RS00730;product=50S ribosomal protein L18;protein_id=WP_011166897.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	20843	21607	.	+	.	ID=gene-MSCD_RS05740;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=MSCD_RS05740;old_locus_tag=MSCd_1340
NZ_LAUX01000020.1	Protein Homology	CDS	20843	21607	.	+	0	ID=cds-WP_011166896.1;Parent=gene-MSCD_RS05740;Dbxref=GenBank:WP_011166896.1;Name=WP_011166896.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862901.1;locus_tag=MSCD_RS05740;product=30S ribosomal protein S5;protein_id=WP_011166896.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	21626	22063	.	+	.	ID=gene-MSCD_RS00740;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=MSCD_RS00740;old_locus_tag=MSCd_1350
NZ_LAUX01000020.1	Protein Homology	CDS	21626	22063	.	+	0	ID=cds-WP_011166895.1;Parent=gene-MSCD_RS00740;Dbxref=GenBank:WP_011166895.1;Name=WP_011166895.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362500.1;locus_tag=MSCD_RS00740;product=50S ribosomal protein L15;protein_id=WP_011166895.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	22063	23511	.	+	.	ID=gene-MSCD_RS00745;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=MSCD_RS00745;old_locus_tag=MSCd_1360
NZ_LAUX01000020.1	Protein Homology	CDS	22063	23511	.	+	0	ID=cds-WP_011166894.1;Parent=gene-MSCD_RS00745;Dbxref=GenBank:WP_011166894.1;Name=WP_011166894.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387532.1;locus_tag=MSCD_RS00745;product=preprotein translocase subunit SecY;protein_id=WP_011166894.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	23639	24280	.	+	.	ID=gene-MSCD_RS00750;Name=MSCD_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00750;old_locus_tag=MSCd_1370
NZ_LAUX01000020.1	Protein Homology	CDS	23639	24280	.	+	0	ID=cds-WP_011166893.1;Parent=gene-MSCD_RS00750;Dbxref=GenBank:WP_011166893.1;Name=WP_011166893.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387531.1;locus_tag=MSCD_RS00750;product=adenylate kinase;protein_id=WP_011166893.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	24280	25035	.	+	.	ID=gene-MSCD_RS00755;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=MSCD_RS00755;old_locus_tag=MSCd_1380
NZ_LAUX01000020.1	Protein Homology	CDS	24280	25035	.	+	0	ID=cds-WP_011166892.1;Parent=gene-MSCD_RS00755;Dbxref=GenBank:WP_011166892.1;Name=WP_011166892.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729785.1;locus_tag=MSCD_RS00755;product=type I methionyl aminopeptidase;protein_id=WP_011166892.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	25047	25271	.	+	.	ID=gene-MSCD_RS00760;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=MSCD_RS00760;old_locus_tag=MSCd_1390
NZ_LAUX01000020.1	Protein Homology	CDS	25047	25271	.	+	0	ID=cds-WP_011167188.1;Parent=gene-MSCD_RS00760;Dbxref=GenBank:WP_011167188.1;Name=WP_011167188.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167188.1;locus_tag=MSCD_RS00760;product=translation initiation factor IF-1;protein_id=WP_011167188.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	25340	25453	.	+	.	ID=gene-MSCD_RS00765;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=MSCD_RS00765;old_locus_tag=MSCd_1400
NZ_LAUX01000020.1	Protein Homology	CDS	25340	25453	.	+	0	ID=cds-WP_004429078.1;Parent=gene-MSCD_RS00765;Dbxref=GenBank:WP_004429078.1;Name=WP_004429078.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004028447.1;locus_tag=MSCD_RS00765;product=50S ribosomal protein L36;protein_id=WP_004429078.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	25490	25855	.	+	.	ID=gene-MSCD_RS00770;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=MSCD_RS00770;old_locus_tag=MSCd_1410
NZ_LAUX01000020.1	Protein Homology	CDS	25490	25855	.	+	0	ID=cds-WP_011166891.1;Parent=gene-MSCD_RS00770;Dbxref=GenBank:WP_011166891.1;Name=WP_011166891.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183045.1;locus_tag=MSCD_RS00770;product=30S ribosomal protein S13;protein_id=WP_011166891.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	25881	26270	.	+	.	ID=gene-MSCD_RS00775;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=MSCD_RS00775;old_locus_tag=MSCd_1420
NZ_LAUX01000020.1	Protein Homology	CDS	25881	26270	.	+	0	ID=cds-WP_008362476.1;Parent=gene-MSCD_RS00775;Dbxref=GenBank:WP_008362476.1;Name=WP_008362476.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014034919.1;locus_tag=MSCD_RS00775;product=30S ribosomal protein S11;protein_id=WP_008362476.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	26274	27227	.	+	.	ID=gene-MSCD_RS00780;Name=MSCD_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00780;old_locus_tag=MSCd_1430
NZ_LAUX01000020.1	Protein Homology	CDS	26274	27227	.	+	0	ID=cds-WP_011166890.1;Parent=gene-MSCD_RS00780;Dbxref=GenBank:WP_011166890.1;Name=WP_011166890.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387528.1;locus_tag=MSCD_RS00780;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_011166890.1;transl_table=4
NZ_LAUX01000020.1	RefSeq	gene	27247	27606	.	+	.	ID=gene-MSCD_RS00785;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=MSCD_RS00785;old_locus_tag=MSCd_1440
NZ_LAUX01000020.1	Protein Homology	CDS	27247	27606	.	+	0	ID=cds-WP_011166889.1;Parent=gene-MSCD_RS00785;Dbxref=GenBank:WP_011166889.1;Name=WP_011166889.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166889.1;locus_tag=MSCD_RS00785;product=50S ribosomal protein L17;protein_id=WP_011166889.1;transl_table=4
##sequence-region NZ_LAUX01000021.1 1 9765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000021.1	RefSeq	region	1	9765	.	+	.	ID=NZ_LAUX01000021.1:1..9765;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000021.1	RefSeq	gene	150	1376	.	+	.	ID=gene-MSCD_RS00790;Name=MSCD_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00790;old_locus_tag=MSCd_1450
NZ_LAUX01000021.1	Protein Homology	CDS	150	1376	.	+	0	ID=cds-WP_011166888.1;Parent=gene-MSCD_RS00790;Dbxref=GenBank:WP_011166888.1;Name=WP_011166888.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862899.1;locus_tag=MSCD_RS00790;product=energy-coupling factor transporter ATPase;protein_id=WP_011166888.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	1364	2275	.	+	.	ID=gene-MSCD_RS00795;Name=MSCD_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00795;old_locus_tag=MSCd_1460
NZ_LAUX01000021.1	Protein Homology	CDS	1364	2275	.	+	0	ID=cds-WP_011166887.1;Parent=gene-MSCD_RS00795;Dbxref=GenBank:WP_011166887.1;Name=WP_011166887.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729782.1;locus_tag=MSCD_RS00795;product=energy-coupling factor transporter ATPase;protein_id=WP_011166887.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	2289	3299	.	+	.	ID=gene-MSCD_RS00800;Name=MSCD_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00800;old_locus_tag=MSCd_1470
NZ_LAUX01000021.1	Protein Homology	CDS	2289	3299	.	+	0	ID=cds-WP_011166886.1;Parent=gene-MSCD_RS00800;Dbxref=GenBank:WP_011166886.1;Name=WP_011166886.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362463.1;locus_tag=MSCD_RS00800;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_011166886.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	3302	4057	.	+	.	ID=gene-MSCD_RS00805;Name=MSCD_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00805;old_locus_tag=MSCd_1480
NZ_LAUX01000021.1	Protein Homology	CDS	3302	4057	.	+	0	ID=cds-WP_045596612.1;Parent=gene-MSCD_RS00805;Dbxref=GenBank:WP_045596612.1;Name=WP_045596612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862896.1;locus_tag=MSCD_RS00805;product=tRNA pseudouridine synthase A;protein_id=WP_045596612.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	4152	8297	.	+	.	ID=gene-MSCD_RS00810;Name=MSCD_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00810;old_locus_tag=MSCd_1490
NZ_LAUX01000021.1	Protein Homology	CDS	4152	8297	.	+	0	ID=cds-WP_015545298.1;Parent=gene-MSCD_RS00810;Dbxref=GenBank:WP_015545298.1;Name=WP_015545298.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862895.1;locus_tag=MSCD_RS00810;product=ABC transporter permease;protein_id=WP_015545298.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	8427	8882	.	+	.	ID=gene-MSCD_RS00815;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=MSCD_RS00815;old_locus_tag=MSCd_1500
NZ_LAUX01000021.1	Protein Homology	CDS	8427	8882	.	+	0	ID=cds-WP_011166883.1;Parent=gene-MSCD_RS00815;Dbxref=GenBank:WP_011166883.1;Name=WP_011166883.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387522.1;locus_tag=MSCD_RS00815;product=50S ribosomal protein L13;protein_id=WP_011166883.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	8882	9280	.	+	.	ID=gene-MSCD_RS00820;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=MSCD_RS00820;old_locus_tag=MSCd_1510
NZ_LAUX01000021.1	Protein Homology	CDS	8882	9280	.	+	0	ID=cds-WP_011166882.1;Parent=gene-MSCD_RS00820;Dbxref=GenBank:WP_011166882.1;Name=WP_011166882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729777.1;locus_tag=MSCD_RS00820;product=30S ribosomal protein S9;protein_id=WP_011166882.1;transl_table=4
NZ_LAUX01000021.1	RefSeq	gene	9439	9765	.	+	.	ID=gene-MSCD_RS00825;Name=MSCD_RS00825;end_range=9765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00825;partial=true
NZ_LAUX01000021.1	Protein Homology	CDS	9439	9765	.	+	0	ID=cds-WP_146149233.1;Parent=gene-MSCD_RS00825;Dbxref=GenBank:WP_146149233.1;Name=WP_146149233.1;Ontology_term=GO:0009897;end_range=9765,.;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584493.1;locus_tag=MSCD_RS00825;partial=true;product=MOLPALP family lipoprotein;protein_id=WP_146149233.1;transl_table=4
##sequence-region NZ_LAUX01000022.1 1 4689
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000022.1	RefSeq	region	1	4689	.	+	.	ID=NZ_LAUX01000022.1:1..4689;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000022.1	RefSeq	gene	53	2467	.	+	.	ID=gene-MSCD_RS00830;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=MSCD_RS00830;old_locus_tag=MSCd_1520
NZ_LAUX01000022.1	Protein Homology	CDS	53	2467	.	+	0	ID=cds-WP_015545302.1;Parent=gene-MSCD_RS00830;Dbxref=GenBank:WP_015545302.1;Name=WP_015545302.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269612.1;locus_tag=MSCD_RS00830;product=leucine--tRNA ligase;protein_id=WP_015545302.1;transl_table=4
NZ_LAUX01000022.1	RefSeq	gene	2534	4096	.	+	.	ID=gene-MSCD_RS00835;Name=MSCD_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00835;old_locus_tag=MSCd_1530
NZ_LAUX01000022.1	Protein Homology	CDS	2534	4096	.	+	0	ID=cds-WP_015545496.1;Parent=gene-MSCD_RS00835;Dbxref=GenBank:WP_015545496.1;Name=WP_015545496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447943.1;locus_tag=MSCD_RS00835;product=hypothetical protein;protein_id=WP_015545496.1;transl_table=4
NZ_LAUX01000022.1	RefSeq	gene	4185	4664	.	+	.	ID=gene-MSCD_RS00840;Name=MSCD_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00840;old_locus_tag=MSCd_1540
NZ_LAUX01000022.1	Protein Homology	CDS	4185	4664	.	+	0	ID=cds-WP_011166877.1;Parent=gene-MSCD_RS00840;Dbxref=GenBank:WP_011166877.1;Name=WP_011166877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166877.1;locus_tag=MSCD_RS00840;product=hypothetical protein;protein_id=WP_011166877.1;transl_table=4
##sequence-region NZ_LAUX01000023.1 1 4347
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000023.1	RefSeq	region	1	4347	.	+	.	ID=NZ_LAUX01000023.1:1..4347;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000023.1	RefSeq	gene	54	1151	.	+	.	ID=gene-MSCD_RS00845;Name=ptcA;gbkey=Gene;gene=ptcA;gene_biotype=protein_coding;locus_tag=MSCD_RS00845;old_locus_tag=MSCd_1550
NZ_LAUX01000023.1	Protein Homology	CDS	54	1151	.	+	0	ID=cds-WP_015545373.1;Parent=gene-MSCD_RS00845;Dbxref=GenBank:WP_015545373.1;Name=WP_015545373.1;Ontology_term=GO:0009446,GO:0050231;gbkey=CDS;gene=ptcA;go_function=putrescine carbamoyltransferase activity|0050231||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545373.1;locus_tag=MSCD_RS00845;product=putrescine carbamoyltransferase;protein_id=WP_015545373.1;transl_table=4
NZ_LAUX01000023.1	RefSeq	gene	1172	2065	.	+	.	ID=gene-MSCD_RS05170;Name=MSCD_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05170;old_locus_tag=MSCd_1560
NZ_LAUX01000023.1	Protein Homology	CDS	1172	2065	.	+	0	ID=cds-WP_011166872.1;Parent=gene-MSCD_RS05170;Dbxref=GenBank:WP_011166872.1;Name=WP_011166872.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.7;locus_tag=MSCD_RS05170;product=APC family permease;protein_id=WP_011166872.1;transl_table=4
NZ_LAUX01000023.1	RefSeq	gene	2040	2588	.	+	.	ID=gene-MSCD_RS05175;Name=MSCD_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05175;old_locus_tag=MSCd_1570
NZ_LAUX01000023.1	Protein Homology	CDS	2040	2588	.	+	0	ID=cds-WP_015545516.1;Parent=gene-MSCD_RS05175;Dbxref=GenBank:WP_015545516.1;Name=WP_015545516.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.7;locus_tag=MSCD_RS05175;product=amino acid permease;protein_id=WP_015545516.1;transl_table=4
NZ_LAUX01000023.1	RefSeq	gene	2595	3689	.	+	.	ID=gene-MSCD_RS00855;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=MSCD_RS00855;old_locus_tag=MSCd_1580
NZ_LAUX01000023.1	Protein Homology	CDS	2595	3689	.	+	0	ID=cds-WP_011166871.1;Parent=gene-MSCD_RS00855;Dbxref=GenBank:WP_011166871.1;Name=WP_011166871.1;Ontology_term=GO:0009446,GO:0047632,GO:0005737;gbkey=CDS;gene=aguA;go_component=cytoplasm|0005737||IEA;go_function=agmatine deiminase activity|0047632||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387513.1;locus_tag=MSCD_RS00855;product=agmatine deiminase;protein_id=WP_011166871.1;transl_table=4
NZ_LAUX01000023.1	RefSeq	gene	3805	4347	.	+	.	ID=gene-MSCD_RS00860;Name=MSCD_RS00860;end_range=4347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00860;partial=true
NZ_LAUX01000023.1	Protein Homology	CDS	3805	4347	.	+	0	ID=cds-WP_465100976.1;Parent=gene-MSCD_RS00860;Dbxref=GenBank:WP_465100976.1;Name=WP_465100976.1;end_range=4347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862889.1;locus_tag=MSCD_RS00860;partial=true;product=amino acid kinase family protein;protein_id=WP_465100976.1;transl_table=4
##sequence-region NZ_LAUX01000024.1 1 4002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000024.1	RefSeq	region	1	4002	.	+	.	ID=NZ_LAUX01000024.1:1..4002;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000024.1	RefSeq	gene	624	2519	.	-	.	ID=gene-MSCD_RS00865;Name=MSCD_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00865;old_locus_tag=MSCd_1590
NZ_LAUX01000024.1	Protein Homology	CDS	624	2519	.	-	0	ID=cds-WP_011166866.1;Parent=gene-MSCD_RS00865;Dbxref=GenBank:WP_011166866.1;Name=WP_011166866.1;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166866.1;locus_tag=MSCD_RS00865;product=M13 family metallopeptidase;protein_id=WP_011166866.1;transl_table=4
NZ_LAUX01000024.1	RefSeq	gene	2838	2913	.	+	.	ID=gene-MSCD_RS00870;Name=MSCD_RS00870;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00870;old_locus_tag=MSCd_1600
NZ_LAUX01000024.1	tRNAscan-SE	tRNA	2838	2913	.	+	.	ID=rna-MSCD_RS00870;Parent=gene-MSCD_RS00870;anticodon=(pos:2871..2873);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00870;product=tRNA-His
NZ_LAUX01000024.1	tRNAscan-SE	exon	2838	2913	.	+	.	ID=exon-MSCD_RS00870-1;Parent=rna-MSCD_RS00870;anticodon=(pos:2871..2873);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00870;product=tRNA-His
NZ_LAUX01000024.1	RefSeq	gene	3013	3273	.	+	.	ID=gene-MSCD_RS05180;Name=MSCD_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05180;old_locus_tag=MSCd_1610
NZ_LAUX01000024.1	Protein Homology	CDS	3013	3273	.	+	0	ID=cds-WP_015545518.1;Parent=gene-MSCD_RS05180;Dbxref=GenBank:WP_015545518.1;Name=WP_015545518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545518.1;locus_tag=MSCD_RS05180;product=hypothetical protein;protein_id=WP_015545518.1;transl_table=4
##sequence-region NZ_LAUX01000025.1 1 6105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000025.1	RefSeq	region	1	6105	.	+	.	ID=NZ_LAUX01000025.1:1..6105;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000025.1	RefSeq	gene	26	355	.	+	.	ID=gene-MSCD_RS00880;Name=MSCD_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00880;old_locus_tag=MSCd_1620
NZ_LAUX01000025.1	Protein Homology	CDS	26	355	.	+	0	ID=cds-WP_258177016.1;Parent=gene-MSCD_RS00880;Dbxref=GenBank:WP_258177016.1;Name=WP_258177016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429116.1;locus_tag=MSCD_RS00880;product=lipoprotein;protein_id=WP_258177016.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	379	600	.	+	.	ID=gene-MSCD_RS00885;Name=MSCD_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00885;old_locus_tag=MSCd_1630
NZ_LAUX01000025.1	Protein Homology	CDS	379	600	.	+	0	ID=cds-WP_011166862.1;Parent=gene-MSCD_RS00885;Dbxref=GenBank:WP_011166862.1;Name=WP_011166862.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166862.1;locus_tag=MSCD_RS00885;product=acyl carrier protein;protein_id=WP_011166862.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	601	1065	.	+	.	ID=gene-MSCD_RS00890;Name=MSCD_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00890;old_locus_tag=MSCd_1640
NZ_LAUX01000025.1	Protein Homology	CDS	601	1065	.	+	0	ID=cds-WP_011166861.1;Parent=gene-MSCD_RS00890;Dbxref=GenBank:WP_011166861.1;Name=WP_011166861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166861.1;locus_tag=MSCD_RS00890;product=Fur family transcriptional regulator;protein_id=WP_011166861.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	1141	1216	.	+	.	ID=gene-MSCD_RS00895;Name=MSCD_RS00895;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00895;old_locus_tag=MSCd_1650
NZ_LAUX01000025.1	tRNAscan-SE	tRNA	1141	1216	.	+	.	ID=rna-MSCD_RS00895;Parent=gene-MSCD_RS00895;anticodon=(pos:1174..1176);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00895;product=tRNA-Trp
NZ_LAUX01000025.1	tRNAscan-SE	exon	1141	1216	.	+	.	ID=exon-MSCD_RS00895-1;Parent=rna-MSCD_RS00895;anticodon=(pos:1174..1176);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00895;product=tRNA-Trp
NZ_LAUX01000025.1	RefSeq	gene	1254	1328	.	+	.	ID=gene-MSCD_RS00900;Name=MSCD_RS00900;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS00900;old_locus_tag=MSCd_1660
NZ_LAUX01000025.1	tRNAscan-SE	tRNA	1254	1328	.	+	.	ID=rna-MSCD_RS00900;Parent=gene-MSCD_RS00900;anticodon=(pos:1286..1288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00900;product=tRNA-Trp
NZ_LAUX01000025.1	tRNAscan-SE	exon	1254	1328	.	+	.	ID=exon-MSCD_RS00900-1;Parent=rna-MSCD_RS00900;anticodon=(pos:1286..1288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS00900;product=tRNA-Trp
NZ_LAUX01000025.1	RefSeq	gene	1365	2216	.	-	.	ID=gene-MSCD_RS00905;Name=MSCD_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00905;old_locus_tag=MSCd_1670
NZ_LAUX01000025.1	Protein Homology	CDS	1365	2216	.	-	0	ID=cds-WP_015545626.1;Parent=gene-MSCD_RS00905;Dbxref=GenBank:WP_015545626.1;Name=WP_015545626.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269605.1;locus_tag=MSCD_RS00905;product=DegV family protein;protein_id=WP_015545626.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	2227	3066	.	-	.	ID=gene-MSCD_RS00910;Name=MSCD_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00910;old_locus_tag=MSCd_1680
NZ_LAUX01000025.1	Protein Homology	CDS	2227	3066	.	-	0	ID=cds-WP_011166859.1;Parent=gene-MSCD_RS00910;Dbxref=GenBank:WP_011166859.1;Name=WP_011166859.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862885.1;locus_tag=MSCD_RS00910;product=DegV family protein;protein_id=WP_011166859.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	3141	3749	.	+	.	ID=gene-MSCD_RS00915;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=MSCD_RS00915;old_locus_tag=MSCd_1690
NZ_LAUX01000025.1	Protein Homology	CDS	3141	3749	.	+	0	ID=cds-WP_015545492.1;Parent=gene-MSCD_RS00915;Dbxref=GenBank:WP_015545492.1;Name=WP_015545492.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364155.1;locus_tag=MSCD_RS00915;product=YtpR family tRNA-binding protein;protein_id=WP_015545492.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	3727	4788	.	+	.	ID=gene-MSCD_RS00920;Name=MSCD_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00920;old_locus_tag=MSCd_1700
NZ_LAUX01000025.1	Protein Homology	CDS	3727	4788	.	+	0	ID=cds-WP_015545670.1;Parent=gene-MSCD_RS00920;Dbxref=GenBank:WP_015545670.1;Name=WP_015545670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729760.1;locus_tag=MSCD_RS00920;product=nicotinate phosphoribosyltransferase;protein_id=WP_015545670.1;transl_table=4
NZ_LAUX01000025.1	RefSeq	gene	4797	6041	.	+	.	ID=gene-MSCD_RS00925;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=MSCD_RS00925;old_locus_tag=MSCd_1710
NZ_LAUX01000025.1	Protein Homology	CDS	4797	6041	.	+	0	ID=cds-WP_011166856.1;Parent=gene-MSCD_RS00925;Dbxref=GenBank:WP_011166856.1;Name=WP_011166856.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862882.1;locus_tag=MSCD_RS00925;product=tyrosine--tRNA ligase;protein_id=WP_011166856.1;transl_table=4
##sequence-region NZ_LAUX01000026.1 1 3648
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000026.1	RefSeq	region	1	3648	.	+	.	ID=NZ_LAUX01000026.1:1..3648;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000026.1	RefSeq	gene	219	3182	.	+	.	ID=gene-MSCD_RS00930;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=MSCD_RS00930;old_locus_tag=MSCd_1720
NZ_LAUX01000026.1	Protein Homology	CDS	219	3182	.	+	0	ID=cds-WP_107682065.1;Parent=gene-MSCD_RS00930;Dbxref=GenBank:WP_107682065.1;Name=WP_107682065.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;gene=dnaE;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862881.1;locus_tag=MSCD_RS00930;product=DNA polymerase III subunit alpha;protein_id=WP_107682065.1;transl_table=4
NZ_LAUX01000026.1	RefSeq	pseudogene	3191	3648	.	+	.	ID=gene-MSCD_RS00935;Name=MSCD_RS00935;end_range=3648,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00935;partial=true;pseudo=true
NZ_LAUX01000026.1	Protein Homology	CDS	3191	3648	.	+	0	ID=cds-MSCD_RS00935;Parent=gene-MSCD_RS00935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698357.1;locus_tag=MSCD_RS00935;partial=true;product=PIN domain-containing protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000027.1 1 8100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000027.1	RefSeq	region	1	8100	.	+	.	ID=NZ_LAUX01000027.1:1..8100;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000027.1	RefSeq	gene	1	751	.	+	.	ID=gene-MSCD_RS00940;Name=MSCD_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00940;partial=true;start_range=.,1
NZ_LAUX01000027.1	Protein Homology	CDS	1	751	.	+	1	ID=cds-WP_181256854.1;Parent=gene-MSCD_RS00940;Dbxref=GenBank:WP_181256854.1;Name=WP_181256854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862878.1;locus_tag=MSCD_RS00940;partial=true;product=DnaD domain protein;protein_id=WP_181256854.1;start_range=.,1;transl_table=4
NZ_LAUX01000027.1	RefSeq	gene	761	1699	.	+	.	ID=gene-MSCD_RS00945;Name=MSCD_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00945;old_locus_tag=MSCd_1730
NZ_LAUX01000027.1	Protein Homology	CDS	761	1699	.	+	0	ID=cds-WP_011166851.1;Parent=gene-MSCD_RS00945;Dbxref=GenBank:WP_011166851.1;Name=WP_011166851.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862877.1;locus_tag=MSCD_RS00945;product=ATP-binding protein;protein_id=WP_011166851.1;transl_table=4
NZ_LAUX01000027.1	RefSeq	gene	1800	2816	.	+	.	ID=gene-MSCD_RS00950;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=MSCD_RS00950;old_locus_tag=MSCd_1740
NZ_LAUX01000027.1	Protein Homology	CDS	1800	2816	.	+	0	ID=cds-WP_015545284.1;Parent=gene-MSCD_RS00950;Dbxref=GenBank:WP_015545284.1;Name=WP_015545284.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166850.1;locus_tag=MSCD_RS00950;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_015545284.1;transl_table=4
NZ_LAUX01000027.1	RefSeq	gene	2931	4145	.	+	.	ID=gene-MSCD_RS00955;Name=MSCD_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00955;old_locus_tag=MSCd_1750
NZ_LAUX01000027.1	Protein Homology	CDS	2931	4145	.	+	0	ID=cds-WP_011166849.1;Parent=gene-MSCD_RS00955;Dbxref=GenBank:WP_011166849.1;Name=WP_011166849.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447921.1;locus_tag=MSCD_RS00955;product=phosphoglycerate kinase;protein_id=WP_011166849.1;transl_table=4
NZ_LAUX01000027.1	RefSeq	gene	4322	4825	.	+	.	ID=gene-MSCD_RS00960;Name=MSCD_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00960;old_locus_tag=MSCd_1760
NZ_LAUX01000027.1	Protein Homology	CDS	4322	4825	.	+	0	ID=cds-WP_011166848.1;Parent=gene-MSCD_RS00960;Dbxref=GenBank:WP_011166848.1;Name=WP_011166848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166848.1;locus_tag=MSCD_RS00960;product=AbiJ-related protein;protein_id=WP_011166848.1;transl_table=4
NZ_LAUX01000027.1	RefSeq	gene	4885	7503	.	+	.	ID=gene-MSCD_RS00965;Name=MSCD_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00965;old_locus_tag=MSCd_1770
NZ_LAUX01000027.1	Protein Homology	CDS	4885	7503	.	+	0	ID=cds-WP_045596597.1;Parent=gene-MSCD_RS00965;Dbxref=GenBank:WP_045596597.1;Name=WP_045596597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166847.1;locus_tag=MSCD_RS00965;product=YobI family P-loop NTPase;protein_id=WP_045596597.1;transl_table=4
NZ_LAUX01000027.1	RefSeq	gene	7520	7825	.	+	.	ID=gene-MSCD_RS00970;Name=MSCD_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00970
NZ_LAUX01000027.1	GeneMarkS-2+	CDS	7520	7825	.	+	0	ID=cds-WP_011166846.1;Parent=gene-MSCD_RS00970;Dbxref=GenBank:WP_011166846.1;Name=WP_011166846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS00970;product=hypothetical protein;protein_id=WP_011166846.1;transl_table=4
##sequence-region NZ_LAUX01000028.1 1 3129
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000028.1	RefSeq	region	1	3129	.	+	.	ID=NZ_LAUX01000028.1:1..3129;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000028.1	RefSeq	gene	107	1051	.	-	.	ID=gene-MSCD_RS00975;Name=MSCD_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00975;old_locus_tag=MSCd_1780
NZ_LAUX01000028.1	Protein Homology	CDS	107	1051	.	-	0	ID=cds-WP_045596594.1;Parent=gene-MSCD_RS00975;Dbxref=GenBank:WP_045596594.1;Name=WP_045596594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862873.1;locus_tag=MSCD_RS00975;product=hypothetical protein;protein_id=WP_045596594.1;transl_table=4
NZ_LAUX01000028.1	RefSeq	gene	1126	2958	.	-	.	ID=gene-MSCD_RS00980;Name=MSCD_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00980;old_locus_tag=MSCd_1790
NZ_LAUX01000028.1	Protein Homology	CDS	1126	2958	.	-	0	ID=cds-WP_015545606.1;Parent=gene-MSCD_RS00980;Dbxref=GenBank:WP_015545606.1;Name=WP_015545606.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862872.1;locus_tag=MSCD_RS00980;product=ribonuclease J;protein_id=WP_015545606.1;transl_table=4
##sequence-region NZ_LAUX01000029.1 1 1096
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000029.1	RefSeq	region	1	1096	.	+	.	ID=NZ_LAUX01000029.1:1..1096;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000029.1	RefSeq	gene	199	402	.	+	.	ID=gene-MSCD_RS00985;Name=MSCD_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS00985
NZ_LAUX01000029.1	Protein Homology	CDS	199	402	.	+	0	ID=cds-WP_011166842.1;Parent=gene-MSCD_RS00985;Dbxref=GenBank:WP_011166842.1;Name=WP_011166842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166842.1;locus_tag=MSCD_RS00985;product=hypothetical protein;protein_id=WP_011166842.1;transl_table=4
NZ_LAUX01000029.1	RefSeq	pseudogene	767	1096	.	+	.	ID=gene-MSCD_RS00990;Name=MSCD_RS00990;end_range=1096,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS00990;partial=true;pseudo=true
NZ_LAUX01000029.1	Protein Homology	CDS	767	1096	.	+	0	ID=cds-MSCD_RS00990;Parent=gene-MSCD_RS00990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1096,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166841.1;locus_tag=MSCD_RS00990;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000030.1 1 1484
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000030.1	RefSeq	region	1	1484	.	+	.	ID=NZ_LAUX01000030.1:1..1484;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000030.1	RefSeq	gene	562	1242	.	+	.	ID=gene-MSCD_RS01000;Name=MSCD_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01000;old_locus_tag=MSCd_1800
NZ_LAUX01000030.1	Protein Homology	CDS	562	1242	.	+	0	ID=cds-WP_011166838.1;Parent=gene-MSCD_RS01000;Dbxref=GenBank:WP_011166838.1;Name=WP_011166838.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166838.1;locus_tag=MSCD_RS01000;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_011166838.1;transl_table=4
NZ_LAUX01000030.1	RefSeq	gene	1284	1412	.	+	.	ID=gene-MSCD_RS05185;Name=MSCD_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05185
NZ_LAUX01000030.1	GeneMarkS-2+	CDS	1284	1412	.	+	0	ID=cds-WP_107682066.1;Parent=gene-MSCD_RS05185;Dbxref=GenBank:WP_107682066.1;Name=WP_107682066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05185;product=hypothetical protein;protein_id=WP_107682066.1;transl_table=4
##sequence-region NZ_LAUX01000031.1 1 1428
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000031.1	RefSeq	region	1	1428	.	+	.	ID=NZ_LAUX01000031.1:1..1428;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000031.1	RefSeq	pseudogene	39	1342	.	-	.	ID=gene-MSCD_RS05745;Name=MSCD_RS05745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05745;pseudo=true
NZ_LAUX01000031.1	Protein Homology	CDS	39	1342	.	-	0	ID=cds-MSCD_RS05745;Parent=gene-MSCD_RS05745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862871.1;locus_tag=MSCD_RS05745;product=BspA family leucine-rich repeat surface protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000032.1 1 3941
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000032.1	RefSeq	region	1	3941	.	+	.	ID=NZ_LAUX01000032.1:1..3941;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000032.1	RefSeq	gene	198	683	.	-	.	ID=gene-MSCD_RS05720;Name=MSCD_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05720;old_locus_tag=MSCd_1820
NZ_LAUX01000032.1	Protein Homology	CDS	198	683	.	-	0	ID=cds-WP_011166833.1;Parent=gene-MSCD_RS05720;Dbxref=GenBank:WP_011166833.1;Name=WP_011166833.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: protein motif:HMM:NF014691.7;locus_tag=MSCD_RS05720;product=Fic family protein;protein_id=WP_011166833.1;transl_table=4
NZ_LAUX01000032.1	RefSeq	gene	1100	3241	.	-	.	ID=gene-MSCD_RS01020;Name=MSCD_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01020;old_locus_tag=MSCd_1830
NZ_LAUX01000032.1	Protein Homology	CDS	1100	3241	.	-	0	ID=cds-WP_011166832.1;Parent=gene-MSCD_RS01020;Dbxref=GenBank:WP_011166832.1;Name=WP_011166832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024486.7;locus_tag=MSCD_RS01020;product=PDDEXK-like endonuclease domain-containing protein;protein_id=WP_011166832.1;transl_table=4
NZ_LAUX01000032.1	RefSeq	gene	3411	3767	.	-	.	ID=gene-MSCD_RS05200;Name=MSCD_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05200;old_locus_tag=MSCd_1840
NZ_LAUX01000032.1	Protein Homology	CDS	3411	3767	.	-	0	ID=cds-WP_011166831.1;Parent=gene-MSCD_RS05200;Dbxref=GenBank:WP_011166831.1;Name=WP_011166831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166831.1;locus_tag=MSCD_RS05200;product=hypothetical protein;protein_id=WP_011166831.1;transl_table=4
##sequence-region NZ_LAUX01000033.1 1 2386
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000033.1	RefSeq	region	1	2386	.	+	.	ID=NZ_LAUX01000033.1:1..2386;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000033.1	RefSeq	gene	32	439	.	+	.	ID=gene-MSCD_RS05205;Name=MSCD_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05205;old_locus_tag=MSCd_1850
NZ_LAUX01000033.1	GeneMarkS-2+	CDS	32	439	.	+	0	ID=cds-WP_258177017.1;Parent=gene-MSCD_RS05205;Dbxref=GenBank:WP_258177017.1;Name=WP_258177017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05205;product=hypothetical protein;protein_id=WP_258177017.1;transl_table=4
NZ_LAUX01000033.1	RefSeq	gene	698	1189	.	+	.	ID=gene-MSCD_RS05210;Name=MSCD_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05210;old_locus_tag=MSCd_1860
NZ_LAUX01000033.1	Protein Homology	CDS	698	1189	.	+	0	ID=cds-WP_258177018.1;Parent=gene-MSCD_RS05210;Dbxref=GenBank:WP_258177018.1;Name=WP_258177018.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=MSCD_RS05210;product=BspA family leucine-rich repeat surface protein;protein_id=WP_258177018.1;transl_table=4
NZ_LAUX01000033.1	RefSeq	gene	1262	1639	.	+	.	ID=gene-MSCD_RS01030;Name=MSCD_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01030;old_locus_tag=MSCd_1870
NZ_LAUX01000033.1	Protein Homology	CDS	1262	1639	.	+	0	ID=cds-WP_011166826.1;Parent=gene-MSCD_RS01030;Dbxref=GenBank:WP_011166826.1;Name=WP_011166826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166826.1;locus_tag=MSCD_RS01030;product=DUF2130 domain-containing protein;protein_id=WP_011166826.1;transl_table=4
##sequence-region NZ_LAUX01000034.1 1 2675
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000034.1	RefSeq	region	1	2675	.	+	.	ID=NZ_LAUX01000034.1:1..2675;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000034.1	RefSeq	gene	1	727	.	-	.	ID=gene-MSCD_RS01040;Name=MSCD_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01040;partial=true;start_range=.,1
NZ_LAUX01000034.1	Protein Homology	CDS	1	727	.	-	0	ID=cds-WP_181256855.1;Parent=gene-MSCD_RS01040;Dbxref=GenBank:WP_181256855.1;Name=WP_181256855.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698397.1;locus_tag=MSCD_RS01040;partial=true;product=PTS transporter subunit EIIB;protein_id=WP_181256855.1;start_range=.,1;transl_table=4
NZ_LAUX01000034.1	RefSeq	gene	736	1470	.	-	.	ID=gene-MSCD_RS01045;Name=MSCD_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01045;old_locus_tag=MSCd_1890
NZ_LAUX01000034.1	Protein Homology	CDS	736	1470	.	-	0	ID=cds-WP_011166819.1;Parent=gene-MSCD_RS01045;Dbxref=GenBank:WP_011166819.1;Name=WP_011166819.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269574.1;locus_tag=MSCD_RS01045;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011166819.1;transl_table=4
NZ_LAUX01000034.1	RefSeq	gene	1673	2518	.	+	.	ID=gene-MSCD_RS01050;Name=MSCD_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01050;old_locus_tag=MSCd_1900
NZ_LAUX01000034.1	Protein Homology	CDS	1673	2518	.	+	0	ID=cds-WP_011166818.1;Parent=gene-MSCD_RS01050;Dbxref=GenBank:WP_011166818.1;Name=WP_011166818.1;Ontology_term=GO:0006096,GO:0030388,GO:0004332,GO:0008270;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=glycolytic process|0006096||IEA,fructose 1%2C6-bisphosphate metabolic process|0030388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387480.1;locus_tag=MSCD_RS01050;product=class II fructose-bisphosphate aldolase;protein_id=WP_011166818.1;transl_table=4
##sequence-region NZ_LAUX01000035.1 1 4741
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000035.1	RefSeq	region	1	4741	.	+	.	ID=NZ_LAUX01000035.1:1..4741;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000035.1	RefSeq	gene	1	1950	.	+	.	ID=gene-MSCD_RS01055;Name=MSCD_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01055;partial=true;start_range=.,1
NZ_LAUX01000035.1	Protein Homology	CDS	1	1950	.	+	0	ID=cds-WP_107682067.1;Parent=gene-MSCD_RS01055;Dbxref=GenBank:WP_107682067.1;Name=WP_107682067.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545629.1;locus_tag=MSCD_RS01055;partial=true;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_107682067.1;start_range=.,1;transl_table=4
NZ_LAUX01000035.1	RefSeq	gene	1971	4559	.	+	.	ID=gene-MSCD_RS01060;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=MSCD_RS01060;old_locus_tag=MSCd_1910
NZ_LAUX01000035.1	Protein Homology	CDS	1971	4559	.	+	0	ID=cds-WP_107682068.1;Parent=gene-MSCD_RS01060;Dbxref=GenBank:WP_107682068.1;Name=WP_107682068.1;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387231.1;locus_tag=MSCD_RS01060;product=Ig-specific serine endopeptidase MIP;protein_id=WP_107682068.1;transl_table=4
##sequence-region NZ_LAUX01000036.1 1 4558
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000036.1	RefSeq	region	1	4558	.	+	.	ID=NZ_LAUX01000036.1:1..4558;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000036.1	RefSeq	gene	1	1944	.	+	.	ID=gene-MSCD_RS01065;Name=MSCD_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01065;partial=true;start_range=.,1
NZ_LAUX01000036.1	Protein Homology	CDS	1	1944	.	+	0	ID=cds-WP_107682069.1;Parent=gene-MSCD_RS01065;Dbxref=GenBank:WP_107682069.1;Name=WP_107682069.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729710.1;locus_tag=MSCD_RS01065;partial=true;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_107682069.1;start_range=.,1;transl_table=4
NZ_LAUX01000036.1	RefSeq	pseudogene	1959	4519	.	+	.	ID=gene-MSCD_RS04845;Name=mip;gbkey=Gene;gene=mip;gene_biotype=pseudogene;locus_tag=MSCD_RS04845;pseudo=true
NZ_LAUX01000036.1	Protein Homology	CDS	1959	4519	.	+	0	ID=cds-MSCD_RS04845;Parent=gene-MSCD_RS04845;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729709.1;locus_tag=MSCD_RS04845;product=Ig-specific serine endopeptidase MIP;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000037.1 1 13374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000037.1	RefSeq	region	1	13374	.	+	.	ID=NZ_LAUX01000037.1:1..13374;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000037.1	RefSeq	gene	158	2410	.	+	.	ID=gene-MSCD_RS01080;Name=MSCD_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01080;old_locus_tag=MSCd_1950
NZ_LAUX01000037.1	Protein Homology	CDS	158	2410	.	+	0	ID=cds-WP_015545324.1;Parent=gene-MSCD_RS01080;Dbxref=GenBank:WP_015545324.1;Name=WP_015545324.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584365.1;locus_tag=MSCD_RS01080;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_015545324.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	2430	4985	.	+	.	ID=gene-MSCD_RS01085;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=MSCD_RS01085;old_locus_tag=MSCd_1960
NZ_LAUX01000037.1	Protein Homology	CDS	2430	4985	.	+	0	ID=cds-WP_011166803.1;Parent=gene-MSCD_RS01085;Dbxref=GenBank:WP_011166803.1;Name=WP_011166803.1;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862860.1;locus_tag=MSCD_RS01085;product=Ig-specific serine endopeptidase MIP;protein_id=WP_011166803.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	5258	7510	.	+	.	ID=gene-MSCD_RS01090;Name=MSCD_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01090;old_locus_tag=MSCd_1970
NZ_LAUX01000037.1	Protein Homology	CDS	5258	7510	.	+	0	ID=cds-WP_011166802.1;Parent=gene-MSCD_RS01090;Dbxref=GenBank:WP_011166802.1;Name=WP_011166802.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584365.1;locus_tag=MSCD_RS01090;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_011166802.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	7534	10113	.	+	.	ID=gene-MSCD_RS01095;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=MSCD_RS01095;old_locus_tag=MSCd_1980
NZ_LAUX01000037.1	Protein Homology	CDS	7534	10113	.	+	0	ID=cds-WP_011166801.1;Parent=gene-MSCD_RS01095;Dbxref=GenBank:WP_011166801.1;Name=WP_011166801.1;gbkey=CDS;gene=mip;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166801.1;locus_tag=MSCD_RS01095;product=Ig-specific serine endopeptidase MIP;protein_id=WP_011166801.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	10144	11607	.	+	.	ID=gene-MSCD_RS01100;Name=MSCD_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01100;old_locus_tag=MSCd_1990
NZ_LAUX01000037.1	Protein Homology	CDS	10144	11607	.	+	0	ID=cds-WP_011166800.1;Parent=gene-MSCD_RS01100;Dbxref=GenBank:WP_011166800.1;Name=WP_011166800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862857.1;locus_tag=MSCD_RS01100;product=MSC_0624 family F1-like ATPase-associated membrane protein;protein_id=WP_011166800.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	11582	12076	.	+	.	ID=gene-MSCD_RS01105;Name=MSCD_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01105;old_locus_tag=MSCd_2000
NZ_LAUX01000037.1	Protein Homology	CDS	11582	12076	.	+	0	ID=cds-WP_011166799.1;Parent=gene-MSCD_RS01105;Dbxref=GenBank:WP_011166799.1;Name=WP_011166799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862856.1;locus_tag=MSCD_RS01105;product=DUF2714 domain-containing protein;protein_id=WP_011166799.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	12078	12989	.	+	.	ID=gene-MSCD_RS01110;Name=MSCD_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01110;old_locus_tag=MSCd_2010
NZ_LAUX01000037.1	Protein Homology	CDS	12078	12989	.	+	0	ID=cds-WP_011166798.1;Parent=gene-MSCD_RS01110;Dbxref=GenBank:WP_011166798.1;Name=WP_011166798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729702.1;locus_tag=MSCD_RS01110;product=MSC_0622 family F1-like ATPase gamma subunit;protein_id=WP_011166798.1;transl_table=4
NZ_LAUX01000037.1	RefSeq	gene	12989	13374	.	+	.	ID=gene-MSCD_RS01115;Name=MSCD_RS01115;end_range=13374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01115;partial=true
NZ_LAUX01000037.1	Protein Homology	CDS	12989	13374	.	+	0	ID=cds-WP_107682070.1;Parent=gene-MSCD_RS01115;Dbxref=GenBank:WP_107682070.1;Name=WP_107682070.1;end_range=13374,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045935.1;locus_tag=MSCD_RS01115;partial=true;product=MSC_0621 family F1-like ATPase epsilon subunit;protein_id=WP_107682070.1;transl_table=4
##sequence-region NZ_LAUX01000038.1 1 19821
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000038.1	RefSeq	region	1	19821	.	+	.	ID=NZ_LAUX01000038.1:1..19821;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000038.1	RefSeq	gene	66	2378	.	+	.	ID=gene-MSCD_RS01120;Name=MSCD_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01120;old_locus_tag=MSCd_2020
NZ_LAUX01000038.1	Protein Homology	CDS	66	2378	.	+	0	ID=cds-WP_011166796.1;Parent=gene-MSCD_RS01120;Dbxref=GenBank:WP_011166796.1;Name=WP_011166796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447673.1;locus_tag=MSCD_RS01120;product=MSC_0620 family F1-like ATPase-associated subunit;protein_id=WP_011166796.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	2383	3930	.	+	.	ID=gene-MSCD_RS01125;Name=MSCD_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01125;old_locus_tag=MSCd_2030
NZ_LAUX01000038.1	Protein Homology	CDS	2383	3930	.	+	0	ID=cds-WP_015545383.1;Parent=gene-MSCD_RS01125;Dbxref=GenBank:WP_015545383.1;Name=WP_015545383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862852.1;locus_tag=MSCD_RS01125;product=MSC_0619 family F1-like ATPase alpha subunit;protein_id=WP_015545383.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	3930	5309	.	+	.	ID=gene-MSCD_RS01130;Name=MSCD_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01130;old_locus_tag=MSCd_2040
NZ_LAUX01000038.1	Protein Homology	CDS	3930	5309	.	+	0	ID=cds-WP_011166794.1;Parent=gene-MSCD_RS01130;Dbxref=GenBank:WP_011166794.1;Name=WP_011166794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545601.1;locus_tag=MSCD_RS01130;product=MSC_0618 family F1-like ATPase beta subunit;protein_id=WP_011166794.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	5365	7863	.	-	.	ID=gene-MSCD_RS01135;Name=MSCD_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01135;old_locus_tag=MSCd_2050
NZ_LAUX01000038.1	Protein Homology	CDS	5365	7863	.	-	0	ID=cds-WP_015545590.1;Parent=gene-MSCD_RS01135;Dbxref=GenBank:WP_015545590.1;Name=WP_015545590.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545590.1;locus_tag=MSCD_RS01135;product=MOLPALP family lipoprotein;protein_id=WP_015545590.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	8064	8666	.	+	.	ID=gene-MSCD_RS01140;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=MSCD_RS01140;old_locus_tag=MSCd_2060
NZ_LAUX01000038.1	Protein Homology	CDS	8064	8666	.	+	0	ID=cds-WP_011166792.1;Parent=gene-MSCD_RS01140;Dbxref=GenBank:WP_011166792.1;Name=WP_011166792.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698377.1;locus_tag=MSCD_RS01140;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_011166792.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	8679	9224	.	+	.	ID=gene-MSCD_RS01145;Name=MSCD_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01145;old_locus_tag=MSCd_2070
NZ_LAUX01000038.1	Protein Homology	CDS	8679	9224	.	+	0	ID=cds-WP_011166791.1;Parent=gene-MSCD_RS01145;Dbxref=GenBank:WP_011166791.1;Name=WP_011166791.1;Ontology_term=GO:0030488,GO:0003723,GO:0008175,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA methyltransferase activity|0008175||IEA,tRNA (cytidine(34)-2'-O-ribose)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017698376.1;locus_tag=MSCD_RS01145;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_011166791.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	9224	10090	.	+	.	ID=gene-MSCD_RS01150;Name=MSCD_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01150;old_locus_tag=MSCd_2080
NZ_LAUX01000038.1	Protein Homology	CDS	9224	10090	.	+	0	ID=cds-WP_015545416.1;Parent=gene-MSCD_RS01150;Dbxref=GenBank:WP_015545416.1;Name=WP_015545416.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584372.1;locus_tag=MSCD_RS01150;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_015545416.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	10253	12394	.	+	.	ID=gene-MSCD_RS01155;Name=MSCD_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01155;old_locus_tag=MSCd_2090
NZ_LAUX01000038.1	Protein Homology	CDS	10253	12394	.	+	0	ID=cds-WP_011166789.1;Parent=gene-MSCD_RS01155;Dbxref=GenBank:WP_011166789.1;Name=WP_011166789.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447684.1;locus_tag=MSCD_RS01155;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_011166789.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	12399	13421	.	+	.	ID=gene-MSCD_RS01160;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=MSCD_RS01160;old_locus_tag=MSCd_2100
NZ_LAUX01000038.1	Protein Homology	CDS	12399	13421	.	+	0	ID=cds-WP_013729691.1;Parent=gene-MSCD_RS01160;Dbxref=GenBank:WP_013729691.1;Name=WP_013729691.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729691.1;locus_tag=MSCD_RS01160;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_013729691.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	13423	14025	.	+	.	ID=gene-MSCD_RS01165;Name=MSCD_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01165;old_locus_tag=MSCd_2110
NZ_LAUX01000038.1	Protein Homology	CDS	13423	14025	.	+	0	ID=cds-WP_015545681.1;Parent=gene-MSCD_RS01165;Dbxref=GenBank:WP_015545681.1;Name=WP_015545681.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051082,GO:0051087;gbkey=CDS;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,obsolete unfolded protein binding|0051082||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269379.1;locus_tag=MSCD_RS01165;product=nucleotide exchange factor GrpE;protein_id=WP_015545681.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	14081	15856	.	+	.	ID=gene-MSCD_RS01170;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=MSCD_RS01170;old_locus_tag=MSCd_2120
NZ_LAUX01000038.1	Protein Homology	CDS	14081	15856	.	+	0	ID=cds-WP_011166786.1;Parent=gene-MSCD_RS01170;Dbxref=GenBank:WP_011166786.1;Name=WP_011166786.1;Ontology_term=GO:0006457,GO:0005524;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269380.1;locus_tag=MSCD_RS01170;product=molecular chaperone DnaK;protein_id=WP_011166786.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	15920	17038	.	+	.	ID=gene-MSCD_RS01175;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=MSCD_RS01175;old_locus_tag=MSCd_2130
NZ_LAUX01000038.1	Protein Homology	CDS	15920	17038	.	+	0	ID=cds-WP_011166785.1;Parent=gene-MSCD_RS01175;Dbxref=GenBank:WP_011166785.1;Name=WP_011166785.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862826.1;locus_tag=MSCD_RS01175;product=molecular chaperone DnaJ;protein_id=WP_011166785.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	17244	18122	.	+	.	ID=gene-MSCD_RS01180;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=MSCD_RS01180;old_locus_tag=MSCd_2140
NZ_LAUX01000038.1	Protein Homology	CDS	17244	18122	.	+	0	ID=cds-WP_015545445.1;Parent=gene-MSCD_RS01180;Dbxref=GenBank:WP_015545445.1;Name=WP_015545445.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729687.1;locus_tag=MSCD_RS01180;product=30S ribosomal protein S2;protein_id=WP_015545445.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	18134	19021	.	+	.	ID=gene-MSCD_RS01185;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=MSCD_RS01185;old_locus_tag=MSCd_2150
NZ_LAUX01000038.1	Protein Homology	CDS	18134	19021	.	+	0	ID=cds-WP_011166783.1;Parent=gene-MSCD_RS01185;Dbxref=GenBank:WP_011166783.1;Name=WP_011166783.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862825.1;locus_tag=MSCD_RS01185;product=translation elongation factor Ts;protein_id=WP_011166783.1;transl_table=4
NZ_LAUX01000038.1	RefSeq	gene	19021	19626	.	+	.	ID=gene-MSCD_RS01190;Name=MSCD_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01190;old_locus_tag=MSCd_2160
NZ_LAUX01000038.1	Protein Homology	CDS	19021	19626	.	+	0	ID=cds-WP_015545521.1;Parent=gene-MSCD_RS01190;Dbxref=GenBank:WP_015545521.1;Name=WP_015545521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545521.1;locus_tag=MSCD_RS01190;product=hypothetical protein;protein_id=WP_015545521.1;transl_table=4
##sequence-region NZ_LAUX01000039.1 1 3145
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000039.1	RefSeq	region	1	3145	.	+	.	ID=NZ_LAUX01000039.1:1..3145;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000039.1	RefSeq	gene	114	827	.	+	.	ID=gene-MSCD_RS01195;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=MSCD_RS01195;old_locus_tag=MSCd_2170
NZ_LAUX01000039.1	Protein Homology	CDS	114	827	.	+	0	ID=cds-WP_015545348.1;Parent=gene-MSCD_RS01195;Dbxref=GenBank:WP_015545348.1;Name=WP_015545348.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362997.1;locus_tag=MSCD_RS01195;product=UMP kinase;protein_id=WP_015545348.1;transl_table=4
NZ_LAUX01000039.1	RefSeq	gene	838	1386	.	+	.	ID=gene-MSCD_RS01200;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=MSCD_RS01200;old_locus_tag=MSCd_2180
NZ_LAUX01000039.1	Protein Homology	CDS	838	1386	.	+	0	ID=cds-WP_011166777.1;Parent=gene-MSCD_RS01200;Dbxref=GenBank:WP_011166777.1;Name=WP_011166777.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862823.1;locus_tag=MSCD_RS01200;product=ribosome recycling factor;protein_id=WP_011166777.1;transl_table=4
NZ_LAUX01000039.1	RefSeq	gene	1388	3052	.	+	.	ID=gene-MSCD_RS01205;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=MSCD_RS01205;old_locus_tag=MSCd_2190
NZ_LAUX01000039.1	Protein Homology	CDS	1388	3052	.	+	0	ID=cds-WP_011166776.1;Parent=gene-MSCD_RS01205;Dbxref=GenBank:WP_011166776.1;Name=WP_011166776.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387261.1;locus_tag=MSCD_RS01205;product=arginine--tRNA ligase;protein_id=WP_011166776.1;transl_table=4
##sequence-region NZ_LAUX01000040.1 1 4924
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000040.1	RefSeq	region	1	4924	.	+	.	ID=NZ_LAUX01000040.1:1..4924;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000040.1	RefSeq	gene	118	4566	.	+	.	ID=gene-MSCD_RS01210;Name=MSCD_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01210;old_locus_tag=MSCd_2200
NZ_LAUX01000040.1	Protein Homology	CDS	118	4566	.	+	0	ID=cds-WP_015545577.1;Parent=gene-MSCD_RS01210;Dbxref=GenBank:WP_015545577.1;Name=WP_015545577.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862821.1;locus_tag=MSCD_RS01210;product=ABC transporter permease;protein_id=WP_015545577.1;transl_table=4
NZ_LAUX01000040.1	RefSeq	pseudogene	4575	4924	.	+	.	ID=gene-MSCD_RS01215;Name=MSCD_RS01215;end_range=4924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS01215;partial=true;pseudo=true
NZ_LAUX01000040.1	Protein Homology	CDS	4575	4924	.	+	0	ID=cds-MSCD_RS01215;Parent=gene-MSCD_RS01215;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4924,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729681.1;locus_tag=MSCD_RS01215;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000041.1 1 10263
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000041.1	RefSeq	region	1	10263	.	+	.	ID=NZ_LAUX01000041.1:1..10263;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000041.1	RefSeq	pseudogene	1	214	.	+	.	ID=gene-MSCD_RS01220;Name=MSCD_RS01220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS01220;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000041.1	Protein Homology	CDS	1	214	.	+	1	ID=cds-MSCD_RS01220;Parent=gene-MSCD_RS01220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729681.1;locus_tag=MSCD_RS01220;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	243	1295	.	+	.	ID=gene-MSCD_RS01225;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=MSCD_RS01225;old_locus_tag=MSCd_2210
NZ_LAUX01000041.1	Protein Homology	CDS	243	1295	.	+	0	ID=cds-WP_015545258.1;Parent=gene-MSCD_RS01225;Dbxref=GenBank:WP_015545258.1;Name=WP_015545258.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697747.1;locus_tag=MSCD_RS01225;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_015545258.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	1304	3688	.	+	.	ID=gene-MSCD_RS01230;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=MSCD_RS01230;old_locus_tag=MSCd_2220
NZ_LAUX01000041.1	Protein Homology	CDS	1304	3688	.	+	0	ID=cds-WP_011166772.1;Parent=gene-MSCD_RS01230;Dbxref=GenBank:WP_011166772.1;Name=WP_011166772.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729679.1;locus_tag=MSCD_RS01230;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011166772.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	3688	4206	.	+	.	ID=gene-MSCD_RS01235;Name=MSCD_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01235;old_locus_tag=MSCd_2230
NZ_LAUX01000041.1	Protein Homology	CDS	3688	4206	.	+	0	ID=cds-WP_011166771.1;Parent=gene-MSCD_RS01235;Dbxref=GenBank:WP_011166771.1;Name=WP_011166771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862817.1;locus_tag=MSCD_RS01235;product=YceD family protein;protein_id=WP_011166771.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	4221	4400	.	+	.	ID=gene-MSCD_RS01240;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=MSCD_RS01240;old_locus_tag=MSCd_2240
NZ_LAUX01000041.1	Protein Homology	CDS	4221	4400	.	+	0	ID=cds-WP_008362864.1;Parent=gene-MSCD_RS01240;Dbxref=GenBank:WP_008362864.1;Name=WP_008362864.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362864.1;locus_tag=MSCD_RS01240;product=50S ribosomal protein L32;protein_id=WP_008362864.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	4507	4908	.	+	.	ID=gene-MSCD_RS01245;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=MSCD_RS01245;old_locus_tag=MSCd_2250
NZ_LAUX01000041.1	Protein Homology	CDS	4507	4908	.	+	0	ID=cds-WP_011166770.1;Parent=gene-MSCD_RS01245;Dbxref=GenBank:WP_011166770.1;Name=WP_011166770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166770.1;locus_tag=MSCD_RS01245;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_011166770.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	4917	5843	.	+	.	ID=gene-MSCD_RS01250;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=MSCD_RS01250;old_locus_tag=MSCd_2260
NZ_LAUX01000041.1	Protein Homology	CDS	4917	5843	.	+	0	ID=cds-WP_011166769.1;Parent=gene-MSCD_RS01250;Dbxref=GenBank:WP_011166769.1;Name=WP_011166769.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862815.1;locus_tag=MSCD_RS01250;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_011166769.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	5852	7072	.	+	.	ID=gene-MSCD_RS04785;Name=MSCD_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04785;old_locus_tag=MSCd_2270
NZ_LAUX01000041.1	Protein Homology	CDS	5852	7072	.	+	0	ID=cds-WP_015545441.1;Parent=gene-MSCD_RS04785;Dbxref=GenBank:WP_015545441.1;Name=WP_015545441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545441.1;locus_tag=MSCD_RS04785;product=hypothetical protein;protein_id=WP_015545441.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	7127	8287	.	+	.	ID=gene-MSCD_RS01260;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=MSCD_RS01260;old_locus_tag=MSCd_2280
NZ_LAUX01000041.1	Protein Homology	CDS	7127	8287	.	+	0	ID=cds-WP_011166766.1;Parent=gene-MSCD_RS01260;Dbxref=GenBank:WP_011166766.1;Name=WP_011166766.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729674.1;locus_tag=MSCD_RS01260;product=cell division protein FtsZ;protein_id=WP_011166766.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	8299	8715	.	+	.	ID=gene-MSCD_RS01265;Name=MSCD_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01265;old_locus_tag=MSCd_2290
NZ_LAUX01000041.1	Protein Homology	CDS	8299	8715	.	+	0	ID=cds-WP_011166765.1;Parent=gene-MSCD_RS01265;Dbxref=GenBank:WP_011166765.1;Name=WP_011166765.1;Ontology_term=GO:0000917,GO:0043093;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862813.1;locus_tag=MSCD_RS01265;product=cell division protein SepF;protein_id=WP_011166765.1;transl_table=4
NZ_LAUX01000041.1	RefSeq	gene	8728	9717	.	+	.	ID=gene-MSCD_RS01270;Name=MSCD_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01270;old_locus_tag=MSCd_2300
NZ_LAUX01000041.1	Protein Homology	CDS	8728	9717	.	+	0	ID=cds-WP_011166764.1;Parent=gene-MSCD_RS01270;Dbxref=GenBank:WP_011166764.1;Name=WP_011166764.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166764.1;locus_tag=MSCD_RS01270;product=alpha/beta hydrolase;protein_id=WP_011166764.1;transl_table=4
##sequence-region NZ_LAUX01000042.1 1 9865
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000042.1	RefSeq	region	1	9865	.	+	.	ID=NZ_LAUX01000042.1:1..9865;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000042.1	RefSeq	gene	171	2918	.	+	.	ID=gene-MSCD_RS01275;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=MSCD_RS01275;old_locus_tag=MSCd_2310
NZ_LAUX01000042.1	Protein Homology	CDS	171	2918	.	+	0	ID=cds-WP_015545299.1;Parent=gene-MSCD_RS01275;Dbxref=GenBank:WP_015545299.1;Name=WP_015545299.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863092.1;locus_tag=MSCD_RS01275;product=isoleucine--tRNA ligase;protein_id=WP_015545299.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	2909	3517	.	+	.	ID=gene-MSCD_RS01280;Name=MSCD_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01280;old_locus_tag=MSCd_2320
NZ_LAUX01000042.1	Protein Homology	CDS	2909	3517	.	+	0	ID=cds-WP_011166762.1;Parent=gene-MSCD_RS01280;Dbxref=GenBank:WP_011166762.1;Name=WP_011166762.1;Ontology_term=GO:0006508,GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862810.1;locus_tag=MSCD_RS01280;product=signal peptidase II;protein_id=WP_011166762.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	3498	4430	.	+	.	ID=gene-MSCD_RS01285;Name=MSCD_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01285;old_locus_tag=MSCd_2330
NZ_LAUX01000042.1	Protein Homology	CDS	3498	4430	.	+	0	ID=cds-WP_011166761.1;Parent=gene-MSCD_RS01285;Dbxref=GenBank:WP_011166761.1;Name=WP_011166761.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862809.1;locus_tag=MSCD_RS01285;product=RluA family pseudouridine synthase;protein_id=WP_011166761.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	4423	5724	.	+	.	ID=gene-MSCD_RS01290;Name=MSCD_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01290;old_locus_tag=MSCd_2340
NZ_LAUX01000042.1	Protein Homology	CDS	4423	5724	.	+	0	ID=cds-WP_039275688.1;Parent=gene-MSCD_RS01290;Dbxref=GenBank:WP_039275688.1;Name=WP_039275688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862808.1;locus_tag=MSCD_RS01290;product=hypothetical protein;protein_id=WP_039275688.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	5727	6209	.	+	.	ID=gene-MSCD_RS01295;Name=MSCD_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01295;old_locus_tag=MSCd_2350
NZ_LAUX01000042.1	Protein Homology	CDS	5727	6209	.	+	0	ID=cds-WP_011166759.1;Parent=gene-MSCD_RS01295;Dbxref=GenBank:WP_011166759.1;Name=WP_011166759.1;Ontology_term=GO:0006220,GO:0009972,GO:0004132,GO:0008270;gbkey=CDS;go_function=dCMP deaminase activity|0004132||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine nucleotide metabolic process|0006220||IEA,obsolete cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362837.1;locus_tag=MSCD_RS01295;product=deoxycytidylate deaminase;protein_id=WP_011166759.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	6283	6453	.	+	.	ID=gene-MSCD_RS05215;Name=MSCD_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05215
NZ_LAUX01000042.1	GeneMarkS-2+	CDS	6283	6453	.	+	0	ID=cds-WP_011166758.1;Parent=gene-MSCD_RS05215;Dbxref=GenBank:WP_011166758.1;Name=WP_011166758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05215;product=hypothetical protein;protein_id=WP_011166758.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	7352	7684	.	+	.	ID=gene-MSCD_RS01305;Name=MSCD_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01305;old_locus_tag=MSCd_2370
NZ_LAUX01000042.1	Protein Homology	CDS	7352	7684	.	+	0	ID=cds-WP_011166756.1;Parent=gene-MSCD_RS01305;Dbxref=GenBank:WP_011166756.1;Name=WP_011166756.1;Ontology_term=GO:0006633,GO:0000287,GO:0008897,GO:0016740;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166756.1;locus_tag=MSCD_RS01305;product=holo-ACP synthase;protein_id=WP_011166756.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	7880	8818	.	+	.	ID=gene-MSCD_RS01310;Name=MSCD_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01310;old_locus_tag=MSCd_2380
NZ_LAUX01000042.1	Protein Homology	CDS	7880	8818	.	+	0	ID=cds-WP_015545553.1;Parent=gene-MSCD_RS01310;Dbxref=GenBank:WP_015545553.1;Name=WP_015545553.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545553.1;locus_tag=MSCD_RS01310;product=lysophospholipid acyltransferase family protein;protein_id=WP_015545553.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	8867	9490	.	+	.	ID=gene-MSCD_RS01315;Name=MSCD_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01315;old_locus_tag=MSCd_2390
NZ_LAUX01000042.1	Protein Homology	CDS	8867	9490	.	+	0	ID=cds-WP_011166754.1;Parent=gene-MSCD_RS01315;Dbxref=GenBank:WP_011166754.1;Name=WP_011166754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862805.1;locus_tag=MSCD_RS01315;product=hypothetical protein;protein_id=WP_011166754.1;transl_table=4
NZ_LAUX01000042.1	RefSeq	gene	9616	9691	.	+	.	ID=gene-MSCD_RS01320;Name=MSCD_RS01320;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS01320;old_locus_tag=MSCd_2400
NZ_LAUX01000042.1	tRNAscan-SE	tRNA	9616	9691	.	+	.	ID=rna-MSCD_RS01320;Parent=gene-MSCD_RS01320;anticodon=(pos:9649..9651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01320;product=tRNA-Thr
NZ_LAUX01000042.1	tRNAscan-SE	exon	9616	9691	.	+	.	ID=exon-MSCD_RS01320-1;Parent=rna-MSCD_RS01320;anticodon=(pos:9649..9651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01320;product=tRNA-Thr
NZ_LAUX01000042.1	RefSeq	gene	9698	9781	.	+	.	ID=gene-MSCD_RS01325;Name=MSCD_RS01325;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS01325;old_locus_tag=MSCd_2410
NZ_LAUX01000042.1	tRNAscan-SE	tRNA	9698	9781	.	+	.	ID=rna-MSCD_RS01325;Parent=gene-MSCD_RS01325;anticodon=(pos:9732..9734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01325;product=tRNA-Tyr
NZ_LAUX01000042.1	tRNAscan-SE	exon	9698	9781	.	+	.	ID=exon-MSCD_RS01325-1;Parent=rna-MSCD_RS01325;anticodon=(pos:9732..9734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01325;product=tRNA-Tyr
NZ_LAUX01000042.1	RefSeq	gene	9789	9863	.	+	.	ID=gene-MSCD_RS01330;Name=MSCD_RS01330;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS01330;old_locus_tag=MSCd_2420
NZ_LAUX01000042.1	tRNAscan-SE	tRNA	9789	9863	.	+	.	ID=rna-MSCD_RS01330;Parent=gene-MSCD_RS01330;anticodon=(pos:9821..9823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01330;product=tRNA-Gln
NZ_LAUX01000042.1	tRNAscan-SE	exon	9789	9863	.	+	.	ID=exon-MSCD_RS01330-1;Parent=rna-MSCD_RS01330;anticodon=(pos:9821..9823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01330;product=tRNA-Gln
##sequence-region NZ_LAUX01000043.1 1 2378
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000043.1	RefSeq	region	1	2378	.	+	.	ID=NZ_LAUX01000043.1:1..2378;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000043.1	RefSeq	gene	150	866	.	+	.	ID=gene-MSCD_RS01335;Name=MSCD_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01335;old_locus_tag=MSCd_2430
NZ_LAUX01000043.1	Protein Homology	CDS	150	866	.	+	0	ID=cds-WP_011166752.1;Parent=gene-MSCD_RS01335;Dbxref=GenBank:WP_011166752.1;Name=WP_011166752.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166752.1;locus_tag=MSCD_RS01335;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166752.1;transl_table=4
NZ_LAUX01000043.1	RefSeq	gene	893	1585	.	+	.	ID=gene-MSCD_RS01340;Name=MSCD_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01340;old_locus_tag=MSCd_2440
NZ_LAUX01000043.1	Protein Homology	CDS	893	1585	.	+	0	ID=cds-WP_011166751.1;Parent=gene-MSCD_RS01340;Dbxref=GenBank:WP_011166751.1;Name=WP_011166751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166751.1;locus_tag=MSCD_RS01340;product=hypothetical protein;protein_id=WP_011166751.1;transl_table=4
##sequence-region NZ_LAUX01000044.1 1 1494
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000044.1	RefSeq	region	1	1494	.	+	.	ID=NZ_LAUX01000044.1:1..1494;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000044.1	RefSeq	gene	73	747	.	+	.	ID=gene-MSCD_RS01350;Name=MSCD_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01350;old_locus_tag=MSCd_2450
NZ_LAUX01000044.1	Protein Homology	CDS	73	747	.	+	0	ID=cds-WP_011166748.1;Parent=gene-MSCD_RS01350;Dbxref=GenBank:WP_011166748.1;Name=WP_011166748.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166748.1;locus_tag=MSCD_RS01350;product=lipoprotein;protein_id=WP_011166748.1;transl_table=4
NZ_LAUX01000044.1	RefSeq	gene	1082	1447	.	+	.	ID=gene-MSCD_RS01360;Name=MSCD_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01360;old_locus_tag=MSCd_2460
NZ_LAUX01000044.1	Protein Homology	CDS	1082	1447	.	+	0	ID=cds-WP_011166746.1;Parent=gene-MSCD_RS01360;Dbxref=GenBank:WP_011166746.1;Name=WP_011166746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166746.1;locus_tag=MSCD_RS01360;product=hypothetical protein;protein_id=WP_011166746.1;transl_table=4
##sequence-region NZ_LAUX01000045.1 1 10428
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000045.1	RefSeq	region	1	10428	.	+	.	ID=NZ_LAUX01000045.1:1..10428;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000045.1	RefSeq	gene	272	415	.	+	.	ID=gene-MSCD_RS01365;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=MSCD_RS01365;old_locus_tag=MSCd_2470
NZ_LAUX01000045.1	Protein Homology	CDS	272	415	.	+	0	ID=cds-WP_013729662.1;Parent=gene-MSCD_RS01365;Dbxref=GenBank:WP_013729662.1;Name=WP_013729662.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011183279.1;locus_tag=MSCD_RS01365;product=50S ribosomal protein L33;protein_id=WP_013729662.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	475	1362	.	+	.	ID=gene-MSCD_RS01370;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=MSCD_RS01370;old_locus_tag=MSCd_2480
NZ_LAUX01000045.1	Protein Homology	CDS	475	1362	.	+	0	ID=cds-WP_011166745.1;Parent=gene-MSCD_RS01370;Dbxref=GenBank:WP_011166745.1;Name=WP_011166745.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862803.1;locus_tag=MSCD_RS01370;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_011166745.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	1385	1786	.	+	.	ID=gene-MSCD_RS01375;Name=MSCD_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01375;old_locus_tag=MSCd_2490
NZ_LAUX01000045.1	Protein Homology	CDS	1385	1786	.	+	0	ID=cds-WP_015545405.1;Parent=gene-MSCD_RS01375;Dbxref=GenBank:WP_015545405.1;Name=WP_015545405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697730.1;locus_tag=MSCD_RS01375;product=hypothetical protein;protein_id=WP_015545405.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	1930	2232	.	+	.	ID=gene-MSCD_RS01380;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=MSCD_RS01380;old_locus_tag=MSCd_2500
NZ_LAUX01000045.1	Protein Homology	CDS	1930	2232	.	+	0	ID=cds-WP_011166743.1;Parent=gene-MSCD_RS01380;Dbxref=GenBank:WP_011166743.1;Name=WP_011166743.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387287.1;locus_tag=MSCD_RS01380;product=50S ribosomal protein L21;protein_id=WP_011166743.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	2235	2549	.	+	.	ID=gene-MSCD_RS01385;Name=MSCD_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01385;old_locus_tag=MSCd_2510
NZ_LAUX01000045.1	Protein Homology	CDS	2235	2549	.	+	0	ID=cds-WP_011166742.1;Parent=gene-MSCD_RS01385;Dbxref=GenBank:WP_011166742.1;Name=WP_011166742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362817.1;locus_tag=MSCD_RS01385;product=ribosomal-processing cysteine protease Prp;protein_id=WP_011166742.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	2551	2832	.	+	.	ID=gene-MSCD_RS01390;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=MSCD_RS01390;old_locus_tag=MSCd_2520
NZ_LAUX01000045.1	Protein Homology	CDS	2551	2832	.	+	0	ID=cds-WP_008362816.1;Parent=gene-MSCD_RS01390;Dbxref=GenBank:WP_008362816.1;Name=WP_008362816.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387289.1;locus_tag=MSCD_RS01390;product=50S ribosomal protein L27;protein_id=WP_008362816.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	2996	3883	.	+	.	ID=gene-MSCD_RS01395;Name=MSCD_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01395;old_locus_tag=MSCd_2530
NZ_LAUX01000045.1	Protein Homology	CDS	2996	3883	.	+	0	ID=cds-WP_011166741.1;Parent=gene-MSCD_RS01395;Dbxref=GenBank:WP_011166741.1;Name=WP_011166741.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862801.1;locus_tag=MSCD_RS01395;product=N-acetylneuraminate lyase;protein_id=WP_011166741.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	3885	5588	.	+	.	ID=gene-MSCD_RS01400;Name=MSCD_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01400;old_locus_tag=MSCd_2540
NZ_LAUX01000045.1	Protein Homology	CDS	3885	5588	.	+	0	ID=cds-WP_011166740.1;Parent=gene-MSCD_RS01400;Dbxref=GenBank:WP_011166740.1;Name=WP_011166740.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697728.1;locus_tag=MSCD_RS01400;product=sodium:solute symporter family protein;protein_id=WP_011166740.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	5597	5998	.	+	.	ID=gene-MSCD_RS01405;Name=MSCD_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01405;old_locus_tag=MSCd_2550
NZ_LAUX01000045.1	Protein Homology	CDS	5597	5998	.	+	0	ID=cds-WP_011166739.1;Parent=gene-MSCD_RS01405;Dbxref=GenBank:WP_011166739.1;Name=WP_011166739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166739.1;locus_tag=MSCD_RS01405;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_011166739.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	6037	6912	.	+	.	ID=gene-MSCD_RS01410;Name=MSCD_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01410;old_locus_tag=MSCd_2560
NZ_LAUX01000045.1	Protein Homology	CDS	6037	6912	.	+	0	ID=cds-WP_011166738.1;Parent=gene-MSCD_RS01410;Dbxref=GenBank:WP_011166738.1;Name=WP_011166738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697726.1;locus_tag=MSCD_RS01410;product=ROK family protein;protein_id=WP_011166738.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	6971	7651	.	+	.	ID=gene-MSCD_RS01415;Name=MSCD_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01415;old_locus_tag=MSCd_2570
NZ_LAUX01000045.1	Protein Homology	CDS	6971	7651	.	+	0	ID=cds-WP_011166737.1;Parent=gene-MSCD_RS01415;Dbxref=GenBank:WP_011166737.1;Name=WP_011166737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729654.1;locus_tag=MSCD_RS01415;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_011166737.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	7807	9156	.	+	.	ID=gene-MSCD_RS01420;Name=MSCD_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01420;old_locus_tag=MSCd_2580
NZ_LAUX01000045.1	Protein Homology	CDS	7807	9156	.	+	0	ID=cds-WP_015545333.1;Parent=gene-MSCD_RS01420;Dbxref=GenBank:WP_015545333.1;Name=WP_015545333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387295.1;locus_tag=MSCD_RS01420;product=M20 family metallopeptidase;protein_id=WP_015545333.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	9229	9669	.	+	.	ID=gene-MSCD_RS01425;Name=MSCD_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01425;old_locus_tag=MSCd_2590
NZ_LAUX01000045.1	Protein Homology	CDS	9229	9669	.	+	0	ID=cds-WP_011166735.1;Parent=gene-MSCD_RS01425;Dbxref=GenBank:WP_011166735.1;Name=WP_011166735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862796.1;locus_tag=MSCD_RS01425;product=hypothetical protein;protein_id=WP_011166735.1;transl_table=4
NZ_LAUX01000045.1	RefSeq	gene	9693	10310	.	+	.	ID=gene-MSCD_RS01430;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=MSCD_RS01430;old_locus_tag=MSCd_2600
NZ_LAUX01000045.1	Protein Homology	CDS	9693	10310	.	+	0	ID=cds-WP_011166734.1;Parent=gene-MSCD_RS01430;Dbxref=GenBank:WP_011166734.1;Name=WP_011166734.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447728.1;locus_tag=MSCD_RS01430;product=uridine kinase;protein_id=WP_011166734.1;transl_table=4
##sequence-region NZ_LAUX01000046.1 1 8315
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000046.1	RefSeq	region	1	8315	.	+	.	ID=NZ_LAUX01000046.1:1..8315;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000046.1	RefSeq	pseudogene	107	1314	.	+	.	ID=gene-MSCD_RS01435;Name=MSCD_RS01435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS01435;pseudo=true
NZ_LAUX01000046.1	Protein Homology	CDS	107	1314	.	+	0	ID=cds-MSCD_RS01435;Parent=gene-MSCD_RS01435;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166731.1;locus_tag=MSCD_RS01435;product=Y-family DNA polymerase;pseudo=true;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	1337	2440	.	-	.	ID=gene-MSCD_RS01440;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=MSCD_RS01440;old_locus_tag=MSCd_2630
NZ_LAUX01000046.1	Protein Homology	CDS	1337	2440	.	-	0	ID=cds-WP_011166730.1;Parent=gene-MSCD_RS01440;Dbxref=GenBank:WP_011166730.1;Name=WP_011166730.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166730.1;locus_tag=MSCD_RS01440;product=ribosome biogenesis GTPase YqeH;protein_id=WP_011166730.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	2449	3369	.	-	.	ID=gene-MSCD_RS01445;Name=MSCD_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01445;old_locus_tag=MSCd_2640
NZ_LAUX01000046.1	Protein Homology	CDS	2449	3369	.	-	0	ID=cds-WP_015545344.1;Parent=gene-MSCD_RS01445;Dbxref=GenBank:WP_015545344.1;Name=WP_015545344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862792.1;locus_tag=MSCD_RS01445;product=hypothetical protein;protein_id=WP_015545344.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	3480	4061	.	+	.	ID=gene-MSCD_RS01450;Name=MSCD_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01450;old_locus_tag=MSCd_2650
NZ_LAUX01000046.1	Protein Homology	CDS	3480	4061	.	+	0	ID=cds-WP_011166728.1;Parent=gene-MSCD_RS01450;Dbxref=GenBank:WP_011166728.1;Name=WP_011166728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166728.1;locus_tag=MSCD_RS01450;product=hypothetical protein;protein_id=WP_011166728.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	4115	4252	.	+	.	ID=gene-MSCD_RS05220;Name=MSCD_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05220
NZ_LAUX01000046.1	Protein Homology	CDS	4115	4252	.	+	0	ID=cds-WP_011166727.1;Parent=gene-MSCD_RS05220;Dbxref=GenBank:WP_011166727.1;Name=WP_011166727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166727.1;locus_tag=MSCD_RS05220;product=hypothetical protein;protein_id=WP_011166727.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	4268	5626	.	-	.	ID=gene-MSCD_RS01460;Name=MSCD_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01460;old_locus_tag=MSCd_2660
NZ_LAUX01000046.1	Protein Homology	CDS	4268	5626	.	-	0	ID=cds-WP_011166726.1;Parent=gene-MSCD_RS01460;Dbxref=GenBank:WP_011166726.1;Name=WP_011166726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697765.1;locus_tag=MSCD_RS01460;product=dihydrolipoyl dehydrogenase;protein_id=WP_011166726.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	5704	6627	.	-	.	ID=gene-MSCD_RS01465;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=MSCD_RS01465;old_locus_tag=MSCd_2670
NZ_LAUX01000046.1	Protein Homology	CDS	5704	6627	.	-	0	ID=cds-WP_011166725.1;Parent=gene-MSCD_RS01465;Dbxref=GenBank:WP_011166725.1;Name=WP_011166725.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729645.1;locus_tag=MSCD_RS01465;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_011166725.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	6644	7204	.	-	.	ID=gene-MSCD_RS01470;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=MSCD_RS01470;old_locus_tag=MSCd_2680
NZ_LAUX01000046.1	Protein Homology	CDS	6644	7204	.	-	0	ID=cds-WP_011166724.1;Parent=gene-MSCD_RS01470;Dbxref=GenBank:WP_011166724.1;Name=WP_011166724.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166724.1;locus_tag=MSCD_RS01470;product=Holliday junction branch migration protein RuvA;protein_id=WP_011166724.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	7312	7476	.	-	.	ID=gene-MSCD_RS01475;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=MSCD_RS01475;old_locus_tag=MSCd_2690
NZ_LAUX01000046.1	Protein Homology	CDS	7312	7476	.	-	0	ID=cds-WP_008362785.1;Parent=gene-MSCD_RS01475;Dbxref=GenBank:WP_008362785.1;Name=WP_008362785.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362785.1;locus_tag=MSCD_RS01475;product=30S ribosomal protein S21;protein_id=WP_008362785.1;transl_table=4
NZ_LAUX01000046.1	RefSeq	gene	7755	8294	.	+	.	ID=gene-MSCD_RS01480;Name=MSCD_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01480;old_locus_tag=MSCd_2700
NZ_LAUX01000046.1	Protein Homology	CDS	7755	8294	.	+	0	ID=cds-WP_011166722.1;Parent=gene-MSCD_RS01480;Dbxref=GenBank:WP_011166722.1;Name=WP_011166722.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166722.1;locus_tag=MSCD_RS01480;product=lipoprotein;protein_id=WP_011166722.1;transl_table=4
##sequence-region NZ_LAUX01000047.1 1 5352
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000047.1	RefSeq	region	1	5352	.	+	.	ID=NZ_LAUX01000047.1:1..5352;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000047.1	RefSeq	gene	1	1626	.	+	.	ID=gene-MSCD_RS04850;Name=MSCD_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04850;partial=true;start_range=.,1
NZ_LAUX01000047.1	Protein Homology	CDS	1	1626	.	+	0	ID=cds-WP_181256856.1;Parent=gene-MSCD_RS04850;Dbxref=GenBank:WP_181256856.1;Name=WP_181256856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545331.1;locus_tag=MSCD_RS04850;partial=true;product=hypothetical protein;protein_id=WP_181256856.1;start_range=.,1;transl_table=4
NZ_LAUX01000047.1	RefSeq	gene	1631	2215	.	+	.	ID=gene-MSCD_RS01495;Name=MSCD_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01495;old_locus_tag=MSCd_2710
NZ_LAUX01000047.1	Protein Homology	CDS	1631	2215	.	+	0	ID=cds-WP_011166717.1;Parent=gene-MSCD_RS01495;Dbxref=GenBank:WP_011166717.1;Name=WP_011166717.1;Ontology_term=GO:0006810,GO:0015075;gbkey=CDS;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862785.1;locus_tag=MSCD_RS01495;product=MFS transporter;protein_id=WP_011166717.1;transl_table=4
NZ_LAUX01000047.1	RefSeq	gene	2123	2959	.	-	.	ID=gene-MSCD_RS01500;Name=MSCD_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01500;old_locus_tag=MSCd_2720
NZ_LAUX01000047.1	Protein Homology	CDS	2123	2959	.	-	0	ID=cds-WP_416371522.1;Parent=gene-MSCD_RS01500;Dbxref=GenBank:WP_416371522.1;Name=WP_416371522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387310.1;locus_tag=MSCD_RS01500;product=hypothetical protein;protein_id=WP_416371522.1;transl_table=4
NZ_LAUX01000047.1	RefSeq	gene	3128	4285	.	+	.	ID=gene-MSCD_RS01505;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=MSCD_RS01505;old_locus_tag=MSCd_2730
NZ_LAUX01000047.1	Protein Homology	CDS	3128	4285	.	+	0	ID=cds-WP_015545643.1;Parent=gene-MSCD_RS01505;Dbxref=GenBank:WP_015545643.1;Name=WP_015545643.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269430.1;locus_tag=MSCD_RS01505;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_015545643.1;transl_table=4
NZ_LAUX01000047.1	RefSeq	gene	4337	5293	.	+	.	ID=gene-MSCD_RS01510;Name=MSCD_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01510;old_locus_tag=MSCd_2740
NZ_LAUX01000047.1	Protein Homology	CDS	4337	5293	.	+	0	ID=cds-WP_011166714.1;Parent=gene-MSCD_RS01510;Dbxref=GenBank:WP_011166714.1;Name=WP_011166714.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862782.1;locus_tag=MSCD_RS01510;product=L-lactate dehydrogenase;protein_id=WP_011166714.1;transl_table=4
##sequence-region NZ_LAUX01000048.1 1 2340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000048.1	RefSeq	region	1	2340	.	+	.	ID=NZ_LAUX01000048.1:1..2340;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000048.1	RefSeq	pseudogene	1	108	.	+	.	ID=gene-MSCD_RS05630;Name=MSCD_RS05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05630;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000048.1	Protein Homology	CDS	1	108	.	+	0	ID=cds-MSCD_RS05630;Parent=gene-MSCD_RS05630;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697784.1;locus_tag=MSCD_RS05630;partial=true;product=deacetylase SIR2;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000048.1	RefSeq	gene	86	1123	.	+	.	ID=gene-MSCD_RS01520;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=MSCD_RS01520;old_locus_tag=MSCd_2750
NZ_LAUX01000048.1	Protein Homology	CDS	86	1123	.	+	0	ID=cds-WP_011166709.1;Parent=gene-MSCD_RS01520;Dbxref=GenBank:WP_011166709.1;Name=WP_011166709.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166709.1;locus_tag=MSCD_RS01520;product=lipoate--protein ligase;protein_id=WP_011166709.1;transl_table=4
NZ_LAUX01000048.1	RefSeq	gene	1123	2301	.	+	.	ID=gene-MSCD_RS01525;Name=MSCD_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01525;old_locus_tag=MSCd_2760
NZ_LAUX01000048.1	Protein Homology	CDS	1123	2301	.	+	0	ID=cds-WP_011166708.1;Parent=gene-MSCD_RS01525;Dbxref=GenBank:WP_011166708.1;Name=WP_011166708.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862771.1;locus_tag=MSCD_RS01525;product=NADH-dependent flavin oxidoreductase;protein_id=WP_011166708.1;transl_table=4
##sequence-region NZ_LAUX01000049.1 1 2928
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000049.1	RefSeq	region	1	2928	.	+	.	ID=NZ_LAUX01000049.1:1..2928;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000049.1	RefSeq	gene	120	920	.	-	.	ID=gene-MSCD_RS01530;Name=MSCD_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01530;old_locus_tag=MSCd_2770
NZ_LAUX01000049.1	Protein Homology	CDS	120	920	.	-	0	ID=cds-WP_011166713.1;Parent=gene-MSCD_RS01530;Dbxref=GenBank:WP_011166713.1;Name=WP_011166713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447745.1;locus_tag=MSCD_RS01530;product=alpha/beta fold hydrolase;protein_id=WP_011166713.1;transl_table=4
NZ_LAUX01000049.1	RefSeq	gene	923	1714	.	-	.	ID=gene-MSCD_RS01535;Name=MSCD_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01535;old_locus_tag=MSCd_2780
NZ_LAUX01000049.1	Protein Homology	CDS	923	1714	.	-	0	ID=cds-WP_011166712.1;Parent=gene-MSCD_RS01535;Dbxref=GenBank:WP_011166712.1;Name=WP_011166712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166712.1;locus_tag=MSCD_RS01535;product=alpha/beta fold hydrolase;protein_id=WP_011166712.1;transl_table=4
NZ_LAUX01000049.1	RefSeq	gene	1905	2249	.	+	.	ID=gene-MSCD_RS01540;Name=MSCD_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01540;old_locus_tag=MSCd_2790
NZ_LAUX01000049.1	Protein Homology	CDS	1905	2249	.	+	0	ID=cds-WP_015545501.1;Parent=gene-MSCD_RS01540;Dbxref=GenBank:WP_015545501.1;Name=WP_015545501.1;Ontology_term=GO:0019464,GO:0043687,GO:0033293,GO:0005960;gbkey=CDS;go_component=glycine cleavage complex|0005960||IEA;go_function=monocarboxylic acid binding|0033293||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA,post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545501.1;locus_tag=MSCD_RS01540;product=glycine cleavage system H family protein;protein_id=WP_015545501.1;transl_table=4
NZ_LAUX01000049.1	RefSeq	gene	2251	2928	.	+	.	ID=gene-MSCD_RS01545;Name=MSCD_RS01545;end_range=2928,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01545;partial=true
NZ_LAUX01000049.1	Protein Homology	CDS	2251	2928	.	+	0	ID=cds-WP_107682071.1;Parent=gene-MSCD_RS01545;Dbxref=GenBank:WP_107682071.1;Name=WP_107682071.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;end_range=2928,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697784.1;locus_tag=MSCD_RS01545;partial=true;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_107682071.1;transl_table=4
##sequence-region NZ_LAUX01000050.1 1 3506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000050.1	RefSeq	region	1	3506	.	+	.	ID=NZ_LAUX01000050.1:1..3506;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000050.1	RefSeq	gene	28	1479	.	-	.	ID=gene-MSCD_RS01550;Name=MSCD_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01550;old_locus_tag=MSCd_2800
NZ_LAUX01000050.1	Protein Homology	CDS	28	1479	.	-	0	ID=cds-WP_236252323.1;Parent=gene-MSCD_RS01550;Dbxref=GenBank:WP_236252323.1;Name=WP_236252323.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166707.1;locus_tag=MSCD_RS01550;product=BspA family leucine-rich repeat surface protein;protein_id=WP_236252323.1;transl_table=4
NZ_LAUX01000050.1	RefSeq	gene	1481	3031	.	-	.	ID=gene-MSCD_RS01555;Name=MSCD_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01555;old_locus_tag=MSCd_2810
NZ_LAUX01000050.1	Protein Homology	CDS	1481	3031	.	-	0	ID=cds-WP_011166706.1;Parent=gene-MSCD_RS01555;Dbxref=GenBank:WP_011166706.1;Name=WP_011166706.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166706.1;locus_tag=MSCD_RS01555;product=BspA family leucine-rich repeat surface protein;protein_id=WP_011166706.1;transl_table=4
NZ_LAUX01000050.1	RefSeq	gene	3282	3422	.	-	.	ID=gene-MSCD_RS01560;Name=MSCD_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01560
NZ_LAUX01000050.1	Protein Homology	CDS	3282	3422	.	-	0	ID=cds-WP_015545288.1;Parent=gene-MSCD_RS01560;Dbxref=GenBank:WP_015545288.1;Name=WP_015545288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545288.1;locus_tag=MSCD_RS01560;product=hypothetical protein;protein_id=WP_015545288.1;transl_table=4
##sequence-region NZ_LAUX01000051.1 1 13650
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000051.1	RefSeq	region	1	13650	.	+	.	ID=NZ_LAUX01000051.1:1..13650;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000051.1	RefSeq	gene	1	1516	.	-	.	ID=gene-MSCD_RS01565;Name=MSCD_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01565;partial=true;start_range=.,1
NZ_LAUX01000051.1	Protein Homology	CDS	1	1516	.	-	0	ID=cds-WP_107682028.1;Parent=gene-MSCD_RS01565;Dbxref=GenBank:WP_107682028.1;Name=WP_107682028.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166703.1;locus_tag=MSCD_RS01565;partial=true;product=P68 family surface lipoprotein;protein_id=WP_107682028.1;start_range=.,1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	1641	2450	.	-	.	ID=gene-MSCD_RS01570;Name=MSCD_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01570;old_locus_tag=MSCd_2820
NZ_LAUX01000051.1	Protein Homology	CDS	1641	2450	.	-	0	ID=cds-WP_011166702.1;Parent=gene-MSCD_RS01570;Dbxref=GenBank:WP_011166702.1;Name=WP_011166702.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447755.1;locus_tag=MSCD_RS01570;product=ABC transporter permease subunit;protein_id=WP_011166702.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	2428	3441	.	-	.	ID=gene-MSCD_RS01575;Name=MSCD_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01575;old_locus_tag=MSCd_2830
NZ_LAUX01000051.1	Protein Homology	CDS	2428	3441	.	-	0	ID=cds-WP_015545349.1;Parent=gene-MSCD_RS01575;Dbxref=GenBank:WP_015545349.1;Name=WP_015545349.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447756.1;locus_tag=MSCD_RS01575;product=ABC transporter permease family protein;protein_id=WP_015545349.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	3434	4663	.	-	.	ID=gene-MSCD_RS01580;Name=MSCD_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01580;old_locus_tag=MSCd_2840
NZ_LAUX01000051.1	Protein Homology	CDS	3434	4663	.	-	0	ID=cds-WP_107645137.1;Parent=gene-MSCD_RS01580;Dbxref=GenBank:WP_107645137.1;Name=WP_107645137.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447757.1;locus_tag=MSCD_RS01580;product=ATP-binding cassette domain-containing protein;protein_id=WP_107645137.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	5029	5919	.	+	.	ID=gene-MSCD_RS05750;Name=MSCD_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05750;old_locus_tag=MSCd_2850
NZ_LAUX01000051.1	Protein Homology	CDS	5029	5919	.	+	0	ID=cds-WP_015545460.1;Parent=gene-MSCD_RS05750;Dbxref=GenBank:WP_015545460.1;Name=WP_015545460.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545460.1;locus_tag=MSCD_RS05750;product=MFS transporter;protein_id=WP_015545460.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	6044	6544	.	+	.	ID=gene-MSCD_RS05755;Name=MSCD_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05755;old_locus_tag=MSCd_2860
NZ_LAUX01000051.1	GeneMarkS-2+	CDS	6044	6544	.	+	0	ID=cds-WP_107326357.1;Parent=gene-MSCD_RS05755;Dbxref=GenBank:WP_107326357.1;Name=WP_107326357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05755;product=hypothetical protein;protein_id=WP_107326357.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	6586	8769	.	-	.	ID=gene-MSCD_RS01600;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=MSCD_RS01600;old_locus_tag=MSCd_2870
NZ_LAUX01000051.1	Protein Homology	CDS	6586	8769	.	-	0	ID=cds-WP_015545313.1;Parent=gene-MSCD_RS01600;Dbxref=GenBank:WP_015545313.1;Name=WP_015545313.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862764.1;locus_tag=MSCD_RS01600;product=SF1B family DNA helicase RecD2;protein_id=WP_015545313.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	8877	11573	.	-	.	ID=gene-MSCD_RS01605;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=MSCD_RS01605;old_locus_tag=MSCd_2880
NZ_LAUX01000051.1	Protein Homology	CDS	8877	11573	.	-	0	ID=cds-WP_015545306.1;Parent=gene-MSCD_RS01605;Dbxref=GenBank:WP_015545306.1;Name=WP_015545306.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862763.1;locus_tag=MSCD_RS01605;product=DNA topoisomerase IV subunit A;protein_id=WP_015545306.1;transl_table=4
NZ_LAUX01000051.1	RefSeq	gene	11575	13506	.	-	.	ID=gene-MSCD_RS01610;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=MSCD_RS01610;old_locus_tag=MSCd_2890
NZ_LAUX01000051.1	Protein Homology	CDS	11575	13506	.	-	0	ID=cds-WP_011166694.1;Parent=gene-MSCD_RS01610;Dbxref=GenBank:WP_011166694.1;Name=WP_011166694.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697794.1;locus_tag=MSCD_RS01610;product=DNA topoisomerase IV subunit B;protein_id=WP_011166694.1;transl_table=4
##sequence-region NZ_LAUX01000052.1 1 15853
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000052.1	RefSeq	region	1	15853	.	+	.	ID=NZ_LAUX01000052.1:1..15853;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000052.1	RefSeq	gene	22	1437	.	-	.	ID=gene-MSCD_RS01615;Name=MSCD_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01615;old_locus_tag=MSCd_2900
NZ_LAUX01000052.1	Protein Homology	CDS	22	1437	.	-	0	ID=cds-WP_011166693.1;Parent=gene-MSCD_RS01615;Dbxref=GenBank:WP_011166693.1;Name=WP_011166693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269448.1;locus_tag=MSCD_RS01615;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_011166693.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	1605	2372	.	-	.	ID=gene-MSCD_RS01620;Name=MSCD_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01620;old_locus_tag=MSCd_2910
NZ_LAUX01000052.1	Protein Homology	CDS	1605	2372	.	-	0	ID=cds-WP_011166692.1;Parent=gene-MSCD_RS01620;Dbxref=GenBank:WP_011166692.1;Name=WP_011166692.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862761.1;locus_tag=MSCD_RS01620;product=TrmH family RNA methyltransferase;protein_id=WP_011166692.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	2389	2892	.	-	.	ID=gene-MSCD_RS01625;Name=MSCD_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01625;old_locus_tag=MSCd_2920
NZ_LAUX01000052.1	Protein Homology	CDS	2389	2892	.	-	0	ID=cds-WP_015545320.1;Parent=gene-MSCD_RS01625;Dbxref=GenBank:WP_015545320.1;Name=WP_015545320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364013.1;locus_tag=MSCD_RS01625;product=dUTP diphosphatase;protein_id=WP_015545320.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	2932	3378	.	-	.	ID=gene-MSCD_RS01630;Name=MSCD_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01630;old_locus_tag=MSCd_2930
NZ_LAUX01000052.1	Protein Homology	CDS	2932	3378	.	-	0	ID=cds-WP_011166690.1;Parent=gene-MSCD_RS01630;Dbxref=GenBank:WP_011166690.1;Name=WP_011166690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166690.1;locus_tag=MSCD_RS01630;product=hypothetical protein;protein_id=WP_011166690.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	3404	4687	.	-	.	ID=gene-MSCD_RS01635;Name=MSCD_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01635;old_locus_tag=MSCd_2940
NZ_LAUX01000052.1	Protein Homology	CDS	3404	4687	.	-	0	ID=cds-WP_011166689.1;Parent=gene-MSCD_RS01635;Dbxref=GenBank:WP_011166689.1;Name=WP_011166689.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364005.1;locus_tag=MSCD_RS01635;product=glucose-6-phosphate isomerase;protein_id=WP_011166689.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	pseudogene	4906	6804	.	-	.	ID=gene-MSCD_RS05640;Name=MSCD_RS05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05640;pseudo=true
NZ_LAUX01000052.1	Protein Homology	CDS	4906	6804	.	-	0	ID=cds-MSCD_RS05640;Parent=gene-MSCD_RS05640;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697799.1;locus_tag=MSCD_RS05640;product=M13 family metallopeptidase;pseudo=true;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	6825	7388	.	-	.	ID=gene-MSCD_RS01645;Name=MSCD_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01645;old_locus_tag=MSCd_2970
NZ_LAUX01000052.1	Protein Homology	CDS	6825	7388	.	-	0	ID=cds-WP_011166687.1;Parent=gene-MSCD_RS01645;Dbxref=GenBank:WP_011166687.1;Name=WP_011166687.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862756.1;locus_tag=MSCD_RS01645;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011166687.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	7381	7818	.	-	.	ID=gene-MSCD_RS01650;Name=MSCD_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01650;old_locus_tag=MSCd_2980
NZ_LAUX01000052.1	Protein Homology	CDS	7381	7818	.	-	0	ID=cds-WP_011166686.1;Parent=gene-MSCD_RS01650;Dbxref=GenBank:WP_011166686.1;Name=WP_011166686.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862755.1;locus_tag=MSCD_RS01650;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_011166686.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	7821	9059	.	-	.	ID=gene-MSCD_RS01655;Name=MSCD_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01655;old_locus_tag=MSCd_2990
NZ_LAUX01000052.1	Protein Homology	CDS	7821	9059	.	-	0	ID=cds-WP_011166685.1;Parent=gene-MSCD_RS01655;Dbxref=GenBank:WP_011166685.1;Name=WP_011166685.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447773.1;locus_tag=MSCD_RS01655;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_011166685.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	9262	12174	.	+	.	ID=gene-MSCD_RS01660;Name=MSCD_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01660;old_locus_tag=MSCd_3000
NZ_LAUX01000052.1	Protein Homology	CDS	9262	12174	.	+	0	ID=cds-WP_011166684.1;Parent=gene-MSCD_RS01660;Dbxref=GenBank:WP_011166684.1;Name=WP_011166684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545514.1;locus_tag=MSCD_RS01660;product=lipoprotein;protein_id=WP_011166684.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	12174	14327	.	+	.	ID=gene-MSCD_RS01665;Name=MSCD_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01665;old_locus_tag=MSCd_3010
NZ_LAUX01000052.1	Protein Homology	CDS	12174	14327	.	+	0	ID=cds-WP_107682072.1;Parent=gene-MSCD_RS01665;Dbxref=GenBank:WP_107682072.1;Name=WP_107682072.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584394.1;locus_tag=MSCD_RS01665;product=lipoprotein;protein_id=WP_107682072.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	14330	14728	.	+	.	ID=gene-MSCD_RS01670;Name=MSCD_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01670;old_locus_tag=MSCd_3020
NZ_LAUX01000052.1	Protein Homology	CDS	14330	14728	.	+	0	ID=cds-WP_011166682.1;Parent=gene-MSCD_RS01670;Dbxref=GenBank:WP_011166682.1;Name=WP_011166682.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447776.1;locus_tag=MSCD_RS01670;product=HIT family protein;protein_id=WP_011166682.1;transl_table=4
NZ_LAUX01000052.1	RefSeq	gene	14759	15739	.	-	.	ID=gene-MSCD_RS01675;Name=MSCD_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01675;old_locus_tag=MSCd_3030
NZ_LAUX01000052.1	Protein Homology	CDS	14759	15739	.	-	0	ID=cds-WP_011166681.1;Parent=gene-MSCD_RS01675;Dbxref=GenBank:WP_011166681.1;Name=WP_011166681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269458.1;locus_tag=MSCD_RS01675;product=3'-5' exoribonuclease YhaM family protein;protein_id=WP_011166681.1;transl_table=4
##sequence-region NZ_LAUX01000053.1 1 10268
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000053.1	RefSeq	region	1	10268	.	+	.	ID=NZ_LAUX01000053.1:1..10268;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000053.1	RefSeq	gene	40	969	.	-	.	ID=gene-MSCD_RS01680;Name=MSCD_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01680;old_locus_tag=MSCd_3040
NZ_LAUX01000053.1	Protein Homology	CDS	40	969	.	-	0	ID=cds-WP_015545488.1;Parent=gene-MSCD_RS01680;Dbxref=GenBank:WP_015545488.1;Name=WP_015545488.1;Ontology_term=GO:0004476,GO:0008270;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166679.1;locus_tag=MSCD_RS01680;product=type I phosphomannose isomerase catalytic subunit;protein_id=WP_015545488.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	995	2311	.	-	.	ID=gene-MSCD_RS01685;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=MSCD_RS01685;old_locus_tag=MSCd_3050
NZ_LAUX01000053.1	Protein Homology	CDS	995	2311	.	-	0	ID=cds-WP_011166678.1;Parent=gene-MSCD_RS01685;Dbxref=GenBank:WP_011166678.1;Name=WP_011166678.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166678.1;locus_tag=MSCD_RS01685;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_011166678.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	2304	2987	.	-	.	ID=gene-MSCD_RS01690;Name=MSCD_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01690;old_locus_tag=MSCd_3060
NZ_LAUX01000053.1	Protein Homology	CDS	2304	2987	.	-	0	ID=cds-WP_011166677.1;Parent=gene-MSCD_RS01690;Dbxref=GenBank:WP_011166677.1;Name=WP_011166677.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697808.1;locus_tag=MSCD_RS01690;product=copper homeostasis protein CutC;protein_id=WP_011166677.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	2978	4141	.	-	.	ID=gene-MSCD_RS01695;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=MSCD_RS01695;old_locus_tag=MSCd_3070
NZ_LAUX01000053.1	Protein Homology	CDS	2978	4141	.	-	0	ID=cds-WP_011166676.1;Parent=gene-MSCD_RS01695;Dbxref=GenBank:WP_011166676.1;Name=WP_011166676.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862746.1;locus_tag=MSCD_RS01695;product=methionine adenosyltransferase;protein_id=WP_011166676.1;transl_table=4
NZ_LAUX01000053.1	cmsearch	riboswitch	4215	4310	.	-	.	ID=id-NZ_LAUX01000053.1:4215..4310;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_LAUX01000053.1	RefSeq	gene	4351	5124	.	-	.	ID=gene-MSCD_RS01700;Name=MSCD_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01700;old_locus_tag=MSCd_3080
NZ_LAUX01000053.1	Protein Homology	CDS	4351	5124	.	-	0	ID=cds-WP_015545671.1;Parent=gene-MSCD_RS01700;Dbxref=GenBank:WP_015545671.1;Name=WP_015545671.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729595.1;locus_tag=MSCD_RS01700;product=TIGR00282 family metallophosphoesterase;protein_id=WP_015545671.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	5112	5453	.	-	.	ID=gene-MSCD_RS01705;Name=MSCD_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01705;old_locus_tag=MSCd_3090
NZ_LAUX01000053.1	Protein Homology	CDS	5112	5453	.	-	0	ID=cds-WP_039275658.1;Parent=gene-MSCD_RS01705;Dbxref=GenBank:WP_039275658.1;Name=WP_039275658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387353.1;locus_tag=MSCD_RS01705;product=putative DNA-binding protein;protein_id=WP_039275658.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	5437	6675	.	-	.	ID=gene-MSCD_RS01710;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=MSCD_RS01710;old_locus_tag=MSCd_3100
NZ_LAUX01000053.1	Protein Homology	CDS	5437	6675	.	-	0	ID=cds-WP_015545633.1;Parent=gene-MSCD_RS01710;Dbxref=GenBank:WP_015545633.1;Name=WP_015545633.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545633.1;locus_tag=MSCD_RS01710;product=signal recognition particle-docking protein FtsY;protein_id=WP_015545633.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	6742	7416	.	-	.	ID=gene-MSCD_RS01715;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=MSCD_RS01715;old_locus_tag=MSCd_3110
NZ_LAUX01000053.1	Protein Homology	CDS	6742	7416	.	-	0	ID=cds-WP_107682073.1;Parent=gene-MSCD_RS01715;Dbxref=GenBank:WP_107682073.1;Name=WP_107682073.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863090.1;locus_tag=MSCD_RS01715;product=phosphate signaling complex protein PhoU;protein_id=WP_107682073.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	7425	8237	.	-	.	ID=gene-MSCD_RS01720;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=MSCD_RS01720;old_locus_tag=MSCd_3120
NZ_LAUX01000053.1	Protein Homology	CDS	7425	8237	.	-	0	ID=cds-WP_015545672.1;Parent=gene-MSCD_RS01720;Dbxref=GenBank:WP_015545672.1;Name=WP_015545672.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269467.1;locus_tag=MSCD_RS01720;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_015545672.1;transl_table=4
NZ_LAUX01000053.1	RefSeq	gene	8230	10268	.	-	.	ID=gene-MSCD_RS01725;Name=pstA;end_range=10268,.;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=MSCD_RS01725;partial=true
NZ_LAUX01000053.1	Protein Homology	CDS	8230	10268	.	-	2	ID=cds-WP_107682074.1;Parent=gene-MSCD_RS01725;Dbxref=GenBank:WP_107682074.1;Name=WP_107682074.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;end_range=10268,.;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862741.1;locus_tag=MSCD_RS01725;partial=true;product=phosphate ABC transporter permease PstA;protein_id=WP_107682074.1;transl_table=4
##sequence-region NZ_LAUX01000054.1 1 6231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000054.1	RefSeq	region	1	6231	.	+	.	ID=NZ_LAUX01000054.1:1..6231;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000054.1	RefSeq	gene	65	1216	.	-	.	ID=gene-MSCD_RS01730;Name=ptsS;gbkey=Gene;gene=ptsS;gene_biotype=protein_coding;locus_tag=MSCD_RS01730;old_locus_tag=MSCd_3130
NZ_LAUX01000054.1	Protein Homology	CDS	65	1216	.	-	0	ID=cds-WP_011166669.1;Parent=gene-MSCD_RS01730;Dbxref=GenBank:WP_011166669.1;Name=WP_011166669.1;gbkey=CDS;gene=ptsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166669.1;locus_tag=MSCD_RS01730;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_011166669.1;transl_table=4
NZ_LAUX01000054.1	RefSeq	gene	1306	1749	.	-	.	ID=gene-MSCD_RS01735;Name=MSCD_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01735;old_locus_tag=MSCd_3140
NZ_LAUX01000054.1	Protein Homology	CDS	1306	1749	.	-	0	ID=cds-WP_011166668.1;Parent=gene-MSCD_RS01735;Dbxref=GenBank:WP_011166668.1;Name=WP_011166668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363965.1;locus_tag=MSCD_RS01735;product=hypothetical protein;protein_id=WP_011166668.1;transl_table=4
NZ_LAUX01000054.1	RefSeq	gene	1832	1916	.	-	.	ID=gene-MSCD_RS01740;Name=MSCD_RS01740;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS01740;old_locus_tag=MSCd_3150
NZ_LAUX01000054.1	tRNAscan-SE	tRNA	1832	1916	.	-	.	ID=rna-MSCD_RS01740;Parent=gene-MSCD_RS01740;anticodon=(pos:complement(1880..1882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01740;product=tRNA-Leu
NZ_LAUX01000054.1	tRNAscan-SE	exon	1832	1916	.	-	.	ID=exon-MSCD_RS01740-1;Parent=rna-MSCD_RS01740;anticodon=(pos:complement(1880..1882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01740;product=tRNA-Leu
NZ_LAUX01000054.1	RefSeq	gene	1980	2177	.	-	.	ID=gene-MSCD_RS01745;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=MSCD_RS01745;old_locus_tag=MSCd_3160
NZ_LAUX01000054.1	Protein Homology	CDS	1980	2177	.	-	0	ID=cds-WP_015545544.1;Parent=gene-MSCD_RS01745;Dbxref=GenBank:WP_015545544.1;Name=WP_015545544.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447791.1;locus_tag=MSCD_RS01745;product=50S ribosomal protein L28;protein_id=WP_015545544.1;transl_table=4
NZ_LAUX01000054.1	RefSeq	gene	2345	2656	.	+	.	ID=gene-MSCD_RS01750;Name=MSCD_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01750;old_locus_tag=MSCd_3170
NZ_LAUX01000054.1	Protein Homology	CDS	2345	2656	.	+	0	ID=cds-WP_013729586.1;Parent=gene-MSCD_RS01750;Dbxref=GenBank:WP_013729586.1;Name=WP_013729586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729586.1;locus_tag=MSCD_RS01750;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_013729586.1;transl_table=4
NZ_LAUX01000054.1	RefSeq	gene	2682	4325	.	+	.	ID=gene-MSCD_RS01755;Name=MSCD_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01755;old_locus_tag=MSCd_3180
NZ_LAUX01000054.1	Protein Homology	CDS	2682	4325	.	+	0	ID=cds-WP_107682075.1;Parent=gene-MSCD_RS01755;Dbxref=GenBank:WP_107682075.1;Name=WP_107682075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862739.1;locus_tag=MSCD_RS01755;product=DAK2 domain-containing protein;protein_id=WP_107682075.1;transl_table=4
NZ_LAUX01000054.1	RefSeq	gene	4358	5362	.	+	.	ID=gene-MSCD_RS01760;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=MSCD_RS01760;old_locus_tag=MSCd_3190
NZ_LAUX01000054.1	Protein Homology	CDS	4358	5362	.	+	0	ID=cds-WP_011166664.1;Parent=gene-MSCD_RS01760;Dbxref=GenBank:WP_011166664.1;Name=WP_011166664.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862738.1;locus_tag=MSCD_RS01760;product=phosphate acyltransferase PlsX;protein_id=WP_011166664.1;transl_table=4
NZ_LAUX01000054.1	RefSeq	gene	5352	6050	.	+	.	ID=gene-MSCD_RS01765;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=MSCD_RS01765;old_locus_tag=MSCd_3200
NZ_LAUX01000054.1	Protein Homology	CDS	5352	6050	.	+	0	ID=cds-WP_011166663.1;Parent=gene-MSCD_RS01765;Dbxref=GenBank:WP_011166663.1;Name=WP_011166663.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166663.1;locus_tag=MSCD_RS01765;product=ribonuclease III;protein_id=WP_011166663.1;transl_table=4
##sequence-region NZ_LAUX01000055.1 1 6062
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000055.1	RefSeq	region	1	6062	.	+	.	ID=NZ_LAUX01000055.1:1..6062;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000055.1	RefSeq	gene	1	1374	.	+	.	ID=gene-MSCD_RS01770;Name=MSCD_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01770;partial=true;start_range=.,1
NZ_LAUX01000055.1	Protein Homology	CDS	1	1374	.	+	0	ID=cds-WP_416371523.1;Parent=gene-MSCD_RS01770;Dbxref=GenBank:WP_416371523.1;Name=WP_416371523.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447799.1;locus_tag=MSCD_RS01770;partial=true;product=AAA family ATPase;protein_id=WP_416371523.1;start_range=.,1;transl_table=4
NZ_LAUX01000055.1	RefSeq	gene	1422	3674	.	-	.	ID=gene-MSCD_RS01775;Name=MSCD_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01775;old_locus_tag=MSCd_3210
NZ_LAUX01000055.1	Protein Homology	CDS	1422	3674	.	-	0	ID=cds-WP_107682076.1;Parent=gene-MSCD_RS01775;Dbxref=GenBank:WP_107682076.1;Name=WP_107682076.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166659.1;locus_tag=MSCD_RS01775;product=RelA/SpoT family protein;protein_id=WP_107682076.1;transl_table=4
NZ_LAUX01000055.1	RefSeq	gene	3757	4269	.	-	.	ID=gene-MSCD_RS01780;Name=MSCD_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01780;old_locus_tag=MSCd_3220
NZ_LAUX01000055.1	Protein Homology	CDS	3757	4269	.	-	0	ID=cds-WP_011166658.1;Parent=gene-MSCD_RS01780;Dbxref=GenBank:WP_011166658.1;Name=WP_011166658.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862735.1;locus_tag=MSCD_RS01780;product=adenine phosphoribosyltransferase;protein_id=WP_011166658.1;transl_table=4
NZ_LAUX01000055.1	RefSeq	pseudogene	4281	6062	.	-	.	ID=gene-MSCD_RS01785;Name=MSCD_RS01785;end_range=6062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS01785;partial=true;pseudo=true
NZ_LAUX01000055.1	Protein Homology	CDS	4281	6062	.	-	0	ID=cds-MSCD_RS01785;Parent=gene-MSCD_RS01785;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862734.1;locus_tag=MSCD_RS01785;partial=true;product=protein translocase;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000056.1 1 5801
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000056.1	RefSeq	region	1	5801	.	+	.	ID=NZ_LAUX01000056.1:1..5801;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000056.1	RefSeq	gene	1	2365	.	-	.	ID=gene-MSCD_RS01790;Name=MSCD_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01790;partial=true;start_range=.,1
NZ_LAUX01000056.1	Protein Homology	CDS	1	2365	.	-	0	ID=cds-WP_181256858.1;Parent=gene-MSCD_RS01790;Dbxref=GenBank:WP_181256858.1;Name=WP_181256858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862734.1;locus_tag=MSCD_RS01790;partial=true;product=protein translocase SecDF%2C variant type;protein_id=WP_181256858.1;start_range=.,1;transl_table=4
NZ_LAUX01000056.1	RefSeq	pseudogene	2480	3999	.	-	.	ID=gene-MSCD_RS05645;Name=MSCD_RS05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05645;pseudo=true
NZ_LAUX01000056.1	Protein Homology	CDS	2480	3999	.	-	0	ID=cds-MSCD_RS05645;Parent=gene-MSCD_RS05645;Note=frameshifted;Ontology_term=GO:0055085,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545622.1;locus_tag=MSCD_RS05645;product=YitT family ABC transporter;pseudo=true;transl_table=4
NZ_LAUX01000056.1	RefSeq	gene	4039	5400	.	-	.	ID=gene-MSCD_RS01800;Name=MSCD_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01800;old_locus_tag=MSCd_3250
NZ_LAUX01000056.1	Protein Homology	CDS	4039	5400	.	-	0	ID=cds-WP_011166653.1;Parent=gene-MSCD_RS01800;Dbxref=GenBank:WP_011166653.1;Name=WP_011166653.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729574.1;locus_tag=MSCD_RS01800;product=DEAD/DEAH box helicase;protein_id=WP_011166653.1;transl_table=4
NZ_LAUX01000056.1	RefSeq	gene	5409	5801	.	-	.	ID=gene-MSCD_RS01805;Name=MSCD_RS01805;end_range=5801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01805;partial=true
NZ_LAUX01000056.1	Protein Homology	CDS	5409	5801	.	-	0	ID=cds-WP_181256859.1;Parent=gene-MSCD_RS01805;Dbxref=GenBank:WP_181256859.1;Name=WP_181256859.1;end_range=5801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269482.1;locus_tag=MSCD_RS01805;partial=true;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_181256859.1;transl_table=4
##sequence-region NZ_LAUX01000057.1 1 8740
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000057.1	RefSeq	region	1	8740	.	+	.	ID=NZ_LAUX01000057.1:1..8740;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000057.1	RefSeq	gene	1	319	.	-	.	ID=gene-MSCD_RS01810;Name=MSCD_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01810;partial=true;start_range=.,1
NZ_LAUX01000057.1	Protein Homology	CDS	1	319	.	-	0	ID=cds-WP_181256860.1;Parent=gene-MSCD_RS01810;Dbxref=GenBank:WP_181256860.1;Name=WP_181256860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269482.1;locus_tag=MSCD_RS01810;partial=true;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_181256860.1;start_range=.,1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	306	983	.	-	.	ID=gene-MSCD_RS01815;Name=MSCD_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01815;old_locus_tag=MSCd_3260
NZ_LAUX01000057.1	Protein Homology	CDS	306	983	.	-	0	ID=cds-WP_011166651.1;Parent=gene-MSCD_RS01815;Dbxref=GenBank:WP_011166651.1;Name=WP_011166651.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729572.1;locus_tag=MSCD_RS01815;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_011166651.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	983	2503	.	-	.	ID=gene-MSCD_RS01820;Name=MSCD_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01820;old_locus_tag=MSCd_3270
NZ_LAUX01000057.1	Protein Homology	CDS	983	2503	.	-	0	ID=cds-WP_015545287.1;Parent=gene-MSCD_RS01820;Dbxref=GenBank:WP_015545287.1;Name=WP_015545287.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729571.1;locus_tag=MSCD_RS01820;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_015545287.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	2506	4344	.	-	.	ID=gene-MSCD_RS01825;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=MSCD_RS01825;old_locus_tag=MSCd_3280
NZ_LAUX01000057.1	Protein Homology	CDS	2506	4344	.	-	0	ID=cds-WP_011166649.1;Parent=gene-MSCD_RS01825;Dbxref=GenBank:WP_011166649.1;Name=WP_011166649.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729570.1;locus_tag=MSCD_RS01825;product=DNA primase;protein_id=WP_011166649.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	4379	5749	.	-	.	ID=gene-MSCD_RS01830;Name=MSCD_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01830;old_locus_tag=MSCd_3290
NZ_LAUX01000057.1	Protein Homology	CDS	4379	5749	.	-	0	ID=cds-WP_107682077.1;Parent=gene-MSCD_RS01830;Dbxref=GenBank:WP_107682077.1;Name=WP_107682077.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862727.1;locus_tag=MSCD_RS01830;product=glycine--tRNA ligase;protein_id=WP_107682077.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	5813	6562	.	-	.	ID=gene-MSCD_RS01835;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=MSCD_RS01835;old_locus_tag=MSCd_3300
NZ_LAUX01000057.1	Protein Homology	CDS	5813	6562	.	-	0	ID=cds-WP_011166647.1;Parent=gene-MSCD_RS01835;Dbxref=GenBank:WP_011166647.1;Name=WP_011166647.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697827.1;locus_tag=MSCD_RS01835;product=DNA repair protein RecO;protein_id=WP_011166647.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	6562	7467	.	-	.	ID=gene-MSCD_RS01840;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=MSCD_RS01840;old_locus_tag=MSCd_3310
NZ_LAUX01000057.1	Protein Homology	CDS	6562	7467	.	-	0	ID=cds-WP_011166646.1;Parent=gene-MSCD_RS01840;Dbxref=GenBank:WP_011166646.1;Name=WP_011166646.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862726.1;locus_tag=MSCD_RS01840;product=GTPase Era;protein_id=WP_011166646.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	gene	7471	7965	.	-	.	ID=gene-MSCD_RS01845;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=MSCD_RS01845;old_locus_tag=MSCd_3320
NZ_LAUX01000057.1	Protein Homology	CDS	7471	7965	.	-	0	ID=cds-WP_011166645.1;Parent=gene-MSCD_RS01845;Dbxref=GenBank:WP_011166645.1;Name=WP_011166645.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166645.1;locus_tag=MSCD_RS01845;product=rRNA maturation RNase YbeY;protein_id=WP_011166645.1;transl_table=4
NZ_LAUX01000057.1	RefSeq	pseudogene	7971	8740	.	-	.	ID=gene-MSCD_RS05760;Name=MSCD_RS05760;end_range=8740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05760;old_locus_tag=MSCd_3330;partial=true;pseudo=true
NZ_LAUX01000057.1	Protein Homology	CDS	7971	8740	.	-	1	ID=cds-MSCD_RS05760;Parent=gene-MSCD_RS05760;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447813.1;locus_tag=MSCD_RS05760;partial=true;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000058.1 1 8433
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000058.1	RefSeq	region	1	8433	.	+	.	ID=NZ_LAUX01000058.1:1..8433;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000058.1	RefSeq	gene	1	733	.	-	.	ID=gene-MSCD_RS01860;Name=MSCD_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01860;partial=true;start_range=.,1
NZ_LAUX01000058.1	Protein Homology	CDS	1	733	.	-	0	ID=cds-WP_258177024.1;Parent=gene-MSCD_RS01860;Dbxref=GenBank:WP_258177024.1;Name=WP_258177024.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447813.1;locus_tag=MSCD_RS01860;partial=true;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_258177024.1;start_range=.,1;transl_table=4
NZ_LAUX01000058.1	RefSeq	gene	831	1382	.	-	.	ID=gene-MSCD_RS01865;Name=MSCD_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01865;old_locus_tag=MSCd_3340
NZ_LAUX01000058.1	Protein Homology	CDS	831	1382	.	-	0	ID=cds-WP_011166642.1;Parent=gene-MSCD_RS01865;Dbxref=GenBank:WP_011166642.1;Name=WP_011166642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729564.1;locus_tag=MSCD_RS01865;product=DJ-1 family glyoxalase III;protein_id=WP_011166642.1;transl_table=4
NZ_LAUX01000058.1	RefSeq	gene	1430	6694	.	-	.	ID=gene-MSCD_RS01870;Name=MSCD_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01870;old_locus_tag=MSCd_3350
NZ_LAUX01000058.1	Protein Homology	CDS	1430	6694	.	-	0	ID=cds-WP_039275635.1;Parent=gene-MSCD_RS01870;Dbxref=GenBank:WP_039275635.1;Name=WP_039275635.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166641.1;locus_tag=MSCD_RS01870;product=ABC transporter permease;protein_id=WP_039275635.1;transl_table=4
NZ_LAUX01000058.1	RefSeq	gene	6845	8433	.	+	.	ID=gene-MSCD_RS01875;Name=MSCD_RS01875;end_range=8433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01875;partial=true
NZ_LAUX01000058.1	Protein Homology	CDS	6845	8433	.	+	0	ID=cds-WP_146149234.1;Parent=gene-MSCD_RS01875;Dbxref=GenBank:WP_146149234.1;Name=WP_146149234.1;Ontology_term=GO:0009897;end_range=8433,.;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862725.1;locus_tag=MSCD_RS01875;partial=true;product=MOLPALP family lipoprotein;protein_id=WP_146149234.1;transl_table=4
##sequence-region NZ_LAUX01000059.1 1 6923
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000059.1	RefSeq	region	1	6923	.	+	.	ID=NZ_LAUX01000059.1:1..6923;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000059.1	RefSeq	gene	1	639	.	-	.	ID=gene-MSCD_RS01880;Name=MSCD_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01880;partial=true;start_range=.,1
NZ_LAUX01000059.1	Protein Homology	CDS	1	639	.	-	0	ID=cds-WP_146149235.1;Parent=gene-MSCD_RS01880;Dbxref=GenBank:WP_146149235.1;Name=WP_146149235.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363915.1;locus_tag=MSCD_RS01880;partial=true;product=AAA family ATPase;protein_id=WP_146149235.1;start_range=.,1;transl_table=4
NZ_LAUX01000059.1	RefSeq	gene	756	3107	.	-	.	ID=gene-MSCD_RS01885;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=MSCD_RS01885;old_locus_tag=MSCd_3360
NZ_LAUX01000059.1	Protein Homology	CDS	756	3107	.	-	0	ID=cds-WP_015545289.1;Parent=gene-MSCD_RS01885;Dbxref=GenBank:WP_015545289.1;Name=WP_015545289.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545289.1;locus_tag=MSCD_RS01885;product=endopeptidase La;protein_id=WP_015545289.1;transl_table=4
NZ_LAUX01000059.1	RefSeq	gene	3230	4516	.	-	.	ID=gene-MSCD_RS01890;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=MSCD_RS01890;old_locus_tag=MSCd_3370
NZ_LAUX01000059.1	Protein Homology	CDS	3230	4516	.	-	0	ID=cds-WP_011166637.1;Parent=gene-MSCD_RS01890;Dbxref=GenBank:WP_011166637.1;Name=WP_011166637.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387387.1;locus_tag=MSCD_RS01890;product=trigger factor;protein_id=WP_011166637.1;transl_table=4
NZ_LAUX01000059.1	RefSeq	gene	4533	4835	.	-	.	ID=gene-MSCD_RS01895;Name=MSCD_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01895;old_locus_tag=MSCd_3380
NZ_LAUX01000059.1	Protein Homology	CDS	4533	4835	.	-	0	ID=cds-WP_011166636.1;Parent=gene-MSCD_RS01895;Dbxref=GenBank:WP_011166636.1;Name=WP_011166636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166636.1;locus_tag=MSCD_RS01895;product=MMB_0454 family protein;protein_id=WP_011166636.1;transl_table=4
NZ_LAUX01000059.1	RefSeq	gene	4853	5407	.	-	.	ID=gene-MSCD_RS01900;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=MSCD_RS01900;old_locus_tag=MSCd_3390
NZ_LAUX01000059.1	Protein Homology	CDS	4853	5407	.	-	0	ID=cds-WP_011166635.1;Parent=gene-MSCD_RS01900;Dbxref=GenBank:WP_011166635.1;Name=WP_011166635.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387389.1;locus_tag=MSCD_RS01900;product=elongation factor P;protein_id=WP_011166635.1;transl_table=4
NZ_LAUX01000059.1	RefSeq	gene	5494	6447	.	-	.	ID=gene-MSCD_RS01905;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=MSCD_RS01905;old_locus_tag=MSCd_3400
NZ_LAUX01000059.1	Protein Homology	CDS	5494	6447	.	-	0	ID=cds-WP_011166634.1;Parent=gene-MSCD_RS01905;Dbxref=GenBank:WP_011166634.1;Name=WP_011166634.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166634.1;locus_tag=MSCD_RS01905;product=methionyl-tRNA formyltransferase;protein_id=WP_011166634.1;transl_table=4
NZ_LAUX01000059.1	RefSeq	gene	6437	6923	.	-	.	ID=gene-MSCD_RS01910;Name=MSCD_RS01910;end_range=6923,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01910;partial=true
NZ_LAUX01000059.1	Protein Homology	CDS	6437	6923	.	-	1	ID=cds-WP_146149236.1;Parent=gene-MSCD_RS01910;Dbxref=GenBank:WP_146149236.1;Name=WP_146149236.1;end_range=6923,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862718.1;locus_tag=MSCD_RS01910;partial=true;product=DUF2779 domain-containing protein;protein_id=WP_146149236.1;transl_table=4
##sequence-region NZ_LAUX01000060.1 1 5562
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000060.1	RefSeq	region	1	5562	.	+	.	ID=NZ_LAUX01000060.1:1..5562;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000060.1	RefSeq	gene	1	1654	.	-	.	ID=gene-MSCD_RS01915;Name=MSCD_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01915;partial=true;start_range=.,1
NZ_LAUX01000060.1	Protein Homology	CDS	1	1654	.	-	0	ID=cds-WP_107682079.1;Parent=gene-MSCD_RS01915;Dbxref=GenBank:WP_107682079.1;Name=WP_107682079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862718.1;locus_tag=MSCD_RS01915;partial=true;product=DUF2779 domain-containing protein;protein_id=WP_107682079.1;start_range=.,1;transl_table=4
NZ_LAUX01000060.1	RefSeq	gene	1732	2349	.	-	.	ID=gene-MSCD_RS01920;Name=MSCD_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01920;old_locus_tag=MSCd_3410
NZ_LAUX01000060.1	Protein Homology	CDS	1732	2349	.	-	0	ID=cds-WP_011166632.1;Parent=gene-MSCD_RS01920;Dbxref=GenBank:WP_011166632.1;Name=WP_011166632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729552.1;locus_tag=MSCD_RS01920;product=hypothetical protein;protein_id=WP_011166632.1;transl_table=4
NZ_LAUX01000060.1	RefSeq	gene	2391	3518	.	-	.	ID=gene-MSCD_RS01925;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=MSCD_RS01925;old_locus_tag=MSCd_3420
NZ_LAUX01000060.1	Protein Homology	CDS	2391	3518	.	-	0	ID=cds-WP_011166631.1;Parent=gene-MSCD_RS01925;Dbxref=GenBank:WP_011166631.1;Name=WP_011166631.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269505.1;locus_tag=MSCD_RS01925;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_011166631.1;transl_table=4
NZ_LAUX01000060.1	RefSeq	gene	3615	4379	.	-	.	ID=gene-MSCD_RS01930;Name=MSCD_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01930;old_locus_tag=MSCd_3430
NZ_LAUX01000060.1	Protein Homology	CDS	3615	4379	.	-	0	ID=cds-WP_416371524.1;Parent=gene-MSCD_RS01930;Dbxref=GenBank:WP_416371524.1;Name=WP_416371524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166630.1;locus_tag=MSCD_RS01930;product=hypothetical protein;protein_id=WP_416371524.1;transl_table=4
NZ_LAUX01000060.1	RefSeq	gene	4333	4434	.	-	.	ID=gene-MSCD_RS05765;Name=MSCD_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05765
NZ_LAUX01000060.1	Protein Homology	CDS	4333	4434	.	-	0	ID=cds-WP_394296899.1;Parent=gene-MSCD_RS05765;Dbxref=GenBank:WP_394296899.1;Name=WP_394296899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045726.2;locus_tag=MSCD_RS05765;product=Vmc-like lipoprotein signal peptide domain-containing protein;protein_id=WP_394296899.1;transl_table=4
NZ_LAUX01000060.1	RefSeq	gene	4911	5237	.	-	.	ID=gene-MSCD_RS05770;Name=MSCD_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05770
NZ_LAUX01000060.1	Protein Homology	CDS	4911	5237	.	-	0	ID=cds-WP_394297399.1;Parent=gene-MSCD_RS05770;Dbxref=GenBank:WP_394297399.1;Name=WP_394297399.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045950.1;locus_tag=MSCD_RS05770;product=MAG6090-like repeat-containing lipoprotein;protein_id=WP_394297399.1;transl_table=4
##sequence-region NZ_LAUX01000061.1 1 11457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000061.1	RefSeq	region	1	11457	.	+	.	ID=NZ_LAUX01000061.1:1..11457;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000061.1	RefSeq	gene	11	655	.	-	.	ID=gene-MSCD_RS01940;Name=MSCD_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01940;old_locus_tag=MSCd_3450
NZ_LAUX01000061.1	Protein Homology	CDS	11	655	.	-	0	ID=cds-WP_011166628.1;Parent=gene-MSCD_RS01940;Dbxref=GenBank:WP_011166628.1;Name=WP_011166628.1;Ontology_term=GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387397.1;locus_tag=MSCD_RS01940;product=deoxynucleoside kinase;protein_id=WP_011166628.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	677	1333	.	-	.	ID=gene-MSCD_RS01945;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=MSCD_RS01945;old_locus_tag=MSCd_3460
NZ_LAUX01000061.1	Protein Homology	CDS	677	1333	.	-	0	ID=cds-WP_011166627.1;Parent=gene-MSCD_RS01945;Dbxref=GenBank:WP_011166627.1;Name=WP_011166627.1;Ontology_term=GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166627.1;locus_tag=MSCD_RS01945;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_011166627.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	1335	2438	.	-	.	ID=gene-MSCD_RS01950;Name=MSCD_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01950;old_locus_tag=MSCd_3470
NZ_LAUX01000061.1	Protein Homology	CDS	1335	2438	.	-	0	ID=cds-WP_011166626.1;Parent=gene-MSCD_RS01950;Dbxref=GenBank:WP_011166626.1;Name=WP_011166626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447834.1;locus_tag=MSCD_RS01950;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_011166626.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	2456	2701	.	-	.	ID=gene-MSCD_RS01955;Name=MSCD_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01955;old_locus_tag=MSCd_3480
NZ_LAUX01000061.1	Protein Homology	CDS	2456	2701	.	-	0	ID=cds-WP_011166625.1;Parent=gene-MSCD_RS01955;Dbxref=GenBank:WP_011166625.1;Name=WP_011166625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166625.1;locus_tag=MSCD_RS01955;product=TIGR04561 family membrane protein;protein_id=WP_011166625.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	2719	3456	.	-	.	ID=gene-MSCD_RS01960;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=MSCD_RS01960;old_locus_tag=MSCd_3490
NZ_LAUX01000061.1	Protein Homology	CDS	2719	3456	.	-	0	ID=cds-WP_015545638.1;Parent=gene-MSCD_RS01960;Dbxref=GenBank:WP_015545638.1;Name=WP_015545638.1;Ontology_term=GO:0009435,GO:0008795,GO:0005737;gbkey=CDS;gene=nadE;go_component=cytoplasm|0005737||IEA;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447835.1;locus_tag=MSCD_RS01960;product=NAD(+) synthase;protein_id=WP_015545638.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	3458	4759	.	-	.	ID=gene-MSCD_RS01965;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=MSCD_RS01965;old_locus_tag=MSCd_3500
NZ_LAUX01000061.1	Protein Homology	CDS	3458	4759	.	-	0	ID=cds-WP_107682081.1;Parent=gene-MSCD_RS01965;Dbxref=GenBank:WP_107682081.1;Name=WP_107682081.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447836.1;locus_tag=MSCD_RS01965;product=GTPase ObgE;protein_id=WP_107682081.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	4830	5141	.	-	.	ID=gene-MSCD_RS01970;Name=MSCD_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01970;old_locus_tag=MSCd_3510
NZ_LAUX01000061.1	Protein Homology	CDS	4830	5141	.	-	0	ID=cds-WP_015545559.1;Parent=gene-MSCD_RS01970;Dbxref=GenBank:WP_015545559.1;Name=WP_015545559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447837.1;locus_tag=MSCD_RS01970;product=hypothetical protein;protein_id=WP_015545559.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	5131	5883	.	-	.	ID=gene-MSCD_RS01975;Name=MSCD_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01975;old_locus_tag=MSCd_3520
NZ_LAUX01000061.1	Protein Homology	CDS	5131	5883	.	-	0	ID=cds-WP_011166621.1;Parent=gene-MSCD_RS01975;Dbxref=GenBank:WP_011166621.1;Name=WP_011166621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166621.1;locus_tag=MSCD_RS01975;product=DUF3196 family protein;protein_id=WP_011166621.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	5939	6015	.	-	.	ID=gene-MSCD_RS01980;Name=MSCD_RS01980;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS01980;old_locus_tag=MSCd_3530
NZ_LAUX01000061.1	tRNAscan-SE	tRNA	5939	6015	.	-	.	ID=rna-MSCD_RS01980;Parent=gene-MSCD_RS01980;anticodon=(pos:complement(5979..5981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01980;product=tRNA-Arg
NZ_LAUX01000061.1	tRNAscan-SE	exon	5939	6015	.	-	.	ID=exon-MSCD_RS01980-1;Parent=rna-MSCD_RS01980;anticodon=(pos:complement(5979..5981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS01980;product=tRNA-Arg
NZ_LAUX01000061.1	RefSeq	gene	6071	7678	.	-	.	ID=gene-MSCD_RS01985;Name=MSCD_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01985;old_locus_tag=MSCd_3540
NZ_LAUX01000061.1	Protein Homology	CDS	6071	7678	.	-	0	ID=cds-WP_011166620.1;Parent=gene-MSCD_RS01985;Dbxref=GenBank:WP_011166620.1;Name=WP_011166620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363871.1;locus_tag=MSCD_RS01985;product=hypothetical protein;protein_id=WP_011166620.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	7718	9571	.	-	.	ID=gene-MSCD_RS01990;Name=MSCD_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01990;old_locus_tag=MSCd_3550
NZ_LAUX01000061.1	Protein Homology	CDS	7718	9571	.	-	0	ID=cds-WP_015545427.1;Parent=gene-MSCD_RS01990;Dbxref=GenBank:WP_015545427.1;Name=WP_015545427.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269518.1;locus_tag=MSCD_RS01990;product=ABC transporter ATP-binding protein;protein_id=WP_015545427.1;transl_table=4
NZ_LAUX01000061.1	RefSeq	gene	9589	11457	.	-	.	ID=gene-MSCD_RS01995;Name=MSCD_RS01995;end_range=11457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS01995;partial=true
NZ_LAUX01000061.1	Protein Homology	CDS	9589	11457	.	-	0	ID=cds-WP_258177025.1;Parent=gene-MSCD_RS01995;Dbxref=GenBank:WP_258177025.1;Name=WP_258177025.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;end_range=11457,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269519.1;locus_tag=MSCD_RS01995;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_258177025.1;transl_table=4
##sequence-region NZ_LAUX01000062.1 1 13028
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000062.1	RefSeq	region	1	13028	.	+	.	ID=NZ_LAUX01000062.1:1..13028;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000062.1	RefSeq	pseudogene	376	1150	.	+	.	ID=gene-MSCD_RS05650;Name=MSCD_RS05650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05650;partial=true;pseudo=true;start_range=.,376
NZ_LAUX01000062.1	Protein Homology	CDS	376	1150	.	+	0	ID=cds-MSCD_RS05650;Parent=gene-MSCD_RS05650;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269333.1;locus_tag=MSCD_RS05650;partial=true;product=amino acid--tRNA ligase-related protein;pseudo=true;start_range=.,376;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	1248	2309	.	+	.	ID=gene-MSCD_RS02015;Name=MSCD_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02015;old_locus_tag=MSCd_3580
NZ_LAUX01000062.1	Protein Homology	CDS	1248	2309	.	+	0	ID=cds-WP_039275626.1;Parent=gene-MSCD_RS02015;Dbxref=GenBank:WP_039275626.1;Name=WP_039275626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545657.1;locus_tag=MSCD_RS02015;product=BspA family leucine-rich repeat surface protein;protein_id=WP_039275626.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	2820	3443	.	-	.	ID=gene-MSCD_RS02025;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=MSCD_RS02025;old_locus_tag=MSCd_3600
NZ_LAUX01000062.1	Protein Homology	CDS	2820	3443	.	-	0	ID=cds-WP_011166614.1;Parent=gene-MSCD_RS02025;Dbxref=GenBank:WP_011166614.1;Name=WP_011166614.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862699.1;locus_tag=MSCD_RS02025;product=ribonuclease HII;protein_id=WP_011166614.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	3437	4384	.	-	.	ID=gene-MSCD_RS02030;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=MSCD_RS02030;old_locus_tag=MSCd_3610
NZ_LAUX01000062.1	Protein Homology	CDS	3437	4384	.	-	0	ID=cds-WP_107682083.1;Parent=gene-MSCD_RS02030;Dbxref=GenBank:WP_107682083.1;Name=WP_107682083.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363860.1;locus_tag=MSCD_RS02030;product=ribosome biogenesis GTPase YlqF;protein_id=WP_107682083.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	4476	4868	.	-	.	ID=gene-MSCD_RS02035;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=MSCD_RS02035;old_locus_tag=MSCd_3620
NZ_LAUX01000062.1	Protein Homology	CDS	4476	4868	.	-	0	ID=cds-WP_011387413.1;Parent=gene-MSCD_RS02035;Dbxref=GenBank:WP_011387413.1;Name=WP_011387413.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269524.1;locus_tag=MSCD_RS02035;product=50S ribosomal protein L19;protein_id=WP_011387413.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	4870	5592	.	-	.	ID=gene-MSCD_RS02040;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=MSCD_RS02040;old_locus_tag=MSCd_3630
NZ_LAUX01000062.1	Protein Homology	CDS	4870	5592	.	-	0	ID=cds-WP_011166611.1;Parent=gene-MSCD_RS02040;Dbxref=GenBank:WP_011166611.1;Name=WP_011166611.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862697.1;locus_tag=MSCD_RS02040;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_011166611.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	5594	6082	.	-	.	ID=gene-MSCD_RS02045;Name=MSCD_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02045;old_locus_tag=MSCd_3640
NZ_LAUX01000062.1	Protein Homology	CDS	5594	6082	.	-	0	ID=cds-WP_011166610.1;Parent=gene-MSCD_RS02045;Dbxref=GenBank:WP_011166610.1;Name=WP_011166610.1;Ontology_term=GO:0006364,GO:0042274,GO:0043022,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA,ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729528.1;locus_tag=MSCD_RS02045;product=ribosome maturation factor RimM;protein_id=WP_011166610.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	6100	6426	.	-	.	ID=gene-MSCD_RS02050;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=MSCD_RS02050;old_locus_tag=MSCd_3650
NZ_LAUX01000062.1	Protein Homology	CDS	6100	6426	.	-	0	ID=cds-WP_011166609.1;Parent=gene-MSCD_RS02050;Dbxref=GenBank:WP_011166609.1;Name=WP_011166609.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269527.1;locus_tag=MSCD_RS02050;product=30S ribosomal protein S16;protein_id=WP_011166609.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	6516	6983	.	-	.	ID=gene-MSCD_RS02055;Name=MSCD_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02055;old_locus_tag=MSCd_3660
NZ_LAUX01000062.1	Protein Homology	CDS	6516	6983	.	-	0	ID=cds-WP_011166608.1;Parent=gene-MSCD_RS02055;Dbxref=GenBank:WP_011166608.1;Name=WP_011166608.1;Ontology_term=GO:0032259,GO:0003723,GO:0070038,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (pseudouridine-N3-)-methyltransferase activity|0070038||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729526.1;locus_tag=MSCD_RS02055;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011166608.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	6989	8332	.	-	.	ID=gene-MSCD_RS02060;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=MSCD_RS02060;old_locus_tag=MSCd_3670
NZ_LAUX01000062.1	Protein Homology	CDS	6989	8332	.	-	0	ID=cds-WP_011166607.1;Parent=gene-MSCD_RS02060;Dbxref=GenBank:WP_011166607.1;Name=WP_011166607.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862694.1;locus_tag=MSCD_RS02060;product=signal recognition particle protein;protein_id=WP_011166607.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	8362	9891	.	-	.	ID=gene-MSCD_RS02065;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=MSCD_RS02065;old_locus_tag=MSCd_3680
NZ_LAUX01000062.1	Protein Homology	CDS	8362	9891	.	-	0	ID=cds-WP_011166606.1;Parent=gene-MSCD_RS02065;Dbxref=GenBank:WP_011166606.1;Name=WP_011166606.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269530.1;locus_tag=MSCD_RS02065;product=ribonuclease Y;protein_id=WP_011166606.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	10041	11078	.	-	.	ID=gene-MSCD_RS02070;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=MSCD_RS02070;old_locus_tag=MSCd_3690
NZ_LAUX01000062.1	Protein Homology	CDS	10041	11078	.	-	0	ID=cds-WP_011166605.1;Parent=gene-MSCD_RS02070;Dbxref=GenBank:WP_011166605.1;Name=WP_011166605.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166605.1;locus_tag=MSCD_RS02070;product=recombinase RecA;protein_id=WP_011166605.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	11117	11587	.	-	.	ID=gene-MSCD_RS02075;Name=MSCD_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02075;old_locus_tag=MSCd_3700
NZ_LAUX01000062.1	Protein Homology	CDS	11117	11587	.	-	0	ID=cds-WP_015545303.1;Parent=gene-MSCD_RS02075;Dbxref=GenBank:WP_015545303.1;Name=WP_015545303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545303.1;locus_tag=MSCD_RS02075;product=CinA family protein;protein_id=WP_015545303.1;transl_table=4
NZ_LAUX01000062.1	RefSeq	gene	11627	11965	.	-	.	ID=gene-MSCD_RS02080;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=MSCD_RS02080
NZ_LAUX01000062.1	cmsearch	RNase_P_RNA	11627	11965	.	-	.	ID=rna-MSCD_RS02080;Parent=gene-MSCD_RS02080;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS02080;product=RNase P RNA component class B
NZ_LAUX01000062.1	cmsearch	exon	11627	11965	.	-	.	ID=exon-MSCD_RS02080-1;Parent=rna-MSCD_RS02080;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=MSCD_RS02080;product=RNase P RNA component class B
NZ_LAUX01000062.1	RefSeq	gene	12054	13028	.	-	.	ID=gene-MSCD_RS02085;Name=MSCD_RS02085;end_range=13028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02085;partial=true
NZ_LAUX01000062.1	Protein Homology	CDS	12054	13028	.	-	0	ID=cds-WP_107682084.1;Parent=gene-MSCD_RS02085;Dbxref=GenBank:WP_107682084.1;Name=WP_107682084.1;Ontology_term=GO:0005515;end_range=13028,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862690.1;locus_tag=MSCD_RS02085;partial=true;product=BspA family leucine-rich repeat surface protein;protein_id=WP_107682084.1;transl_table=4
##sequence-region NZ_LAUX01000063.1 1 2557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000063.1	RefSeq	region	1	2557	.	+	.	ID=NZ_LAUX01000063.1:1..2557;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000063.1	RefSeq	gene	66	1523	.	-	.	ID=gene-MSCD_RS02090;Name=MSCD_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02090;old_locus_tag=MSCd_3710
NZ_LAUX01000063.1	Protein Homology	CDS	66	1523	.	-	0	ID=cds-WP_256122303.1;Parent=gene-MSCD_RS02090;Dbxref=GenBank:WP_256122303.1;Name=WP_256122303.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447853.1;locus_tag=MSCD_RS02090;product=BspA family leucine-rich repeat surface protein;protein_id=WP_256122303.1;transl_table=4
NZ_LAUX01000063.1	RefSeq	gene	1691	2068	.	-	.	ID=gene-MSCD_RS02095;Name=MSCD_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02095;old_locus_tag=MSCd_3720
NZ_LAUX01000063.1	Protein Homology	CDS	1691	2068	.	-	0	ID=cds-WP_015545535.1;Parent=gene-MSCD_RS02095;Dbxref=GenBank:WP_015545535.1;Name=WP_015545535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447854.1;locus_tag=MSCD_RS02095;product=DivIVA domain-containing protein;protein_id=WP_015545535.1;transl_table=4
NZ_LAUX01000063.1	RefSeq	gene	2131	2557	.	+	.	ID=gene-MSCD_RS02100;Name=MSCD_RS02100;end_range=2557,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02100;partial=true
NZ_LAUX01000063.1	Protein Homology	CDS	2131	2557	.	+	0	ID=cds-WP_107682085.1;Parent=gene-MSCD_RS02100;Dbxref=GenBank:WP_107682085.1;Name=WP_107682085.1;Ontology_term=GO:0006281;end_range=2557,.;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447855.1;locus_tag=MSCD_RS02100;partial=true;product=Holliday junction resolvase RecU;protein_id=WP_107682085.1;transl_table=4
##sequence-region NZ_LAUX01000064.1 1 1389
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000064.1	RefSeq	region	1	1389	.	+	.	ID=NZ_LAUX01000064.1:1..1389;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000064.1	RefSeq	gene	1	396	.	-	.	ID=gene-MSCD_RS02105;Name=MSCD_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02105;partial=true;start_range=.,1
NZ_LAUX01000064.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-WP_107682086.1;Parent=gene-MSCD_RS02105;Dbxref=GenBank:WP_107682086.1;Name=WP_107682086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269533.1;locus_tag=MSCD_RS02105;partial=true;product=DnaD family protein;protein_id=WP_107682086.1;start_range=.,1;transl_table=4
NZ_LAUX01000064.1	RefSeq	gene	454	726	.	-	.	ID=gene-MSCD_RS02110;Name=MSCD_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02110;old_locus_tag=MSCd_3730
NZ_LAUX01000064.1	Protein Homology	CDS	454	726	.	-	0	ID=cds-WP_011166598.1;Parent=gene-MSCD_RS02110;Dbxref=GenBank:WP_011166598.1;Name=WP_011166598.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166598.1;locus_tag=MSCD_RS02110;product=HU family DNA-binding protein;protein_id=WP_011166598.1;transl_table=4
NZ_LAUX01000064.1	RefSeq	pseudogene	758	1389	.	-	.	ID=gene-MSCD_RS02115;Name=MSCD_RS02115;end_range=1389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02115;partial=true;pseudo=true
NZ_LAUX01000064.1	Protein Homology	CDS	758	1389	.	-	2	ID=cds-MSCD_RS02115;Parent=gene-MSCD_RS02115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166597.1;locus_tag=MSCD_RS02115;partial=true;product=glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000065.1 1 2740
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000065.1	RefSeq	region	1	2740	.	+	.	ID=NZ_LAUX01000065.1:1..2740;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000065.1	RefSeq	gene	1	313	.	-	.	ID=gene-MSCD_RS02120;Name=MSCD_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02120;partial=true;start_range=.,1
NZ_LAUX01000065.1	Protein Homology	CDS	1	313	.	-	0	ID=cds-WP_308506913.1;Parent=gene-MSCD_RS02120;Dbxref=GenBank:WP_308506913.1;Name=WP_308506913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166597.1;locus_tag=MSCD_RS02120;partial=true;product=2-dehydropantoate 2-reductase N-terminal domain-containing protein;protein_id=WP_308506913.1;start_range=.,1;transl_table=4
NZ_LAUX01000065.1	RefSeq	gene	315	1622	.	-	.	ID=gene-MSCD_RS02125;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=MSCD_RS02125;old_locus_tag=MSCd_3740
NZ_LAUX01000065.1	Protein Homology	CDS	315	1622	.	-	0	ID=cds-WP_011166596.1;Parent=gene-MSCD_RS02125;Dbxref=GenBank:WP_011166596.1;Name=WP_011166596.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447858.1;locus_tag=MSCD_RS02125;product=ribosome biogenesis GTPase Der;protein_id=WP_011166596.1;transl_table=4
NZ_LAUX01000065.1	RefSeq	gene	1622	2290	.	-	.	ID=gene-MSCD_RS02130;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=MSCD_RS02130;old_locus_tag=MSCd_3750
NZ_LAUX01000065.1	Protein Homology	CDS	1622	2290	.	-	0	ID=cds-WP_011166595.1;Parent=gene-MSCD_RS02130;Dbxref=GenBank:WP_011166595.1;Name=WP_011166595.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447859.1;locus_tag=MSCD_RS02130;product=(d)CMP kinase;protein_id=WP_011166595.1;transl_table=4
NZ_LAUX01000065.1	RefSeq	pseudogene	2299	2740	.	-	.	ID=gene-MSCD_RS02135;Name=MSCD_RS02135;end_range=2740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02135;partial=true;pseudo=true
NZ_LAUX01000065.1	Protein Homology	CDS	2299	2740	.	-	1	ID=cds-MSCD_RS02135;Parent=gene-MSCD_RS02135;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387444.1;locus_tag=MSCD_RS02135;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000066.1 1 6053
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000066.1	RefSeq	region	1	6053	.	+	.	ID=NZ_LAUX01000066.1:1..6053;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000066.1	RefSeq	gene	827	2941	.	-	.	ID=gene-MSCD_RS02145;Name=MSCD_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02145;old_locus_tag=MSCd_3770
NZ_LAUX01000066.1	Protein Homology	CDS	827	2941	.	-	0	ID=cds-WP_015545307.1;Parent=gene-MSCD_RS02145;Dbxref=GenBank:WP_015545307.1;Name=WP_015545307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545307.1;locus_tag=MSCD_RS02145;product=hypothetical protein;protein_id=WP_015545307.1;transl_table=4
NZ_LAUX01000066.1	RefSeq	gene	2886	3026	.	-	.	ID=gene-MSCD_RS05270;Name=MSCD_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05270
NZ_LAUX01000066.1	GeneMarkS-2+	CDS	2886	3026	.	-	0	ID=cds-WP_176687146.1;Parent=gene-MSCD_RS05270;Dbxref=GenBank:WP_176687146.1;Name=WP_176687146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05270;product=hypothetical protein;protein_id=WP_176687146.1;transl_table=4
NZ_LAUX01000066.1	RefSeq	gene	3201	3323	.	-	.	ID=gene-MSCD_RS05275;Name=MSCD_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05275
NZ_LAUX01000066.1	Protein Homology	CDS	3201	3323	.	-	0	ID=cds-WP_256122290.1;Parent=gene-MSCD_RS05275;Dbxref=GenBank:WP_256122290.1;Name=WP_256122290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166590.1;locus_tag=MSCD_RS05275;product=hypothetical protein;protein_id=WP_256122290.1;transl_table=4
NZ_LAUX01000066.1	RefSeq	gene	3387	4298	.	-	.	ID=gene-MSCD_RS02155;Name=MSCD_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02155;old_locus_tag=MSCd_3780
NZ_LAUX01000066.1	Protein Homology	CDS	3387	4298	.	-	0	ID=cds-WP_011166589.1;Parent=gene-MSCD_RS02155;Dbxref=GenBank:WP_011166589.1;Name=WP_011166589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166589.1;locus_tag=MSCD_RS02155;product=hypothetical protein;protein_id=WP_011166589.1;transl_table=4
NZ_LAUX01000066.1	RefSeq	gene	5200	6053	.	-	.	ID=gene-MSCD_RS02165;Name=MSCD_RS02165;end_range=6053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02165;partial=true
NZ_LAUX01000066.1	Protein Homology	CDS	5200	6053	.	-	2	ID=cds-WP_416371525.1;Parent=gene-MSCD_RS02165;Dbxref=GenBank:WP_416371525.1;Name=WP_416371525.1;end_range=6053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166587.1;locus_tag=MSCD_RS02165;partial=true;product=coiled-coil domain-containing protein;protein_id=WP_416371525.1;transl_table=4
##sequence-region NZ_LAUX01000067.1 1 5021
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000067.1	RefSeq	region	1	5021	.	+	.	ID=NZ_LAUX01000067.1:1..5021;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000067.1	RefSeq	gene	1	688	.	-	.	ID=gene-MSCD_RS02170;Name=MSCD_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02170;partial=true;start_range=.,1
NZ_LAUX01000067.1	Protein Homology	CDS	1	688	.	-	0	ID=cds-WP_107682087.1;Parent=gene-MSCD_RS02170;Dbxref=GenBank:WP_107682087.1;Name=WP_107682087.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447871.1;locus_tag=MSCD_RS02170;partial=true;product=lipoprotein;protein_id=WP_107682087.1;start_range=.,1;transl_table=4
NZ_LAUX01000067.1	RefSeq	gene	876	1532	.	-	.	ID=gene-MSCD_RS02175;Name=MSCD_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02175;old_locus_tag=MSCd_3800
NZ_LAUX01000067.1	Protein Homology	CDS	876	1532	.	-	0	ID=cds-WP_011166585.1;Parent=gene-MSCD_RS02175;Dbxref=GenBank:WP_011166585.1;Name=WP_011166585.1;Ontology_term=GO:0004750,GO:0046872;gbkey=CDS;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166585.1;locus_tag=MSCD_RS02175;product=ribulose-phosphate 3-epimerase;protein_id=WP_011166585.1;transl_table=4
NZ_LAUX01000067.1	RefSeq	gene	1532	3340	.	-	.	ID=gene-MSCD_RS02180;Name=MSCD_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02180;old_locus_tag=MSCd_3810
NZ_LAUX01000067.1	Protein Homology	CDS	1532	3340	.	-	0	ID=cds-WP_107682088.1;Parent=gene-MSCD_RS02180;Dbxref=GenBank:WP_107682088.1;Name=WP_107682088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387454.1;locus_tag=MSCD_RS02180;product=PTS ascorbate-specific subunit IIBC;protein_id=WP_107682088.1;transl_table=4
NZ_LAUX01000067.1	RefSeq	gene	3352	3801	.	-	.	ID=gene-MSCD_RS02185;Name=MSCD_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02185;old_locus_tag=MSCd_3820
NZ_LAUX01000067.1	Protein Homology	CDS	3352	3801	.	-	0	ID=cds-WP_011166583.1;Parent=gene-MSCD_RS02185;Dbxref=GenBank:WP_011166583.1;Name=WP_011166583.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387455.1;locus_tag=MSCD_RS02185;product=PTS sugar transporter subunit IIA;protein_id=WP_011166583.1;transl_table=4
NZ_LAUX01000067.1	RefSeq	gene	4437	4766	.	-	.	ID=gene-MSCD_RS02190;Name=MSCD_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02190;old_locus_tag=MSCd_3830
NZ_LAUX01000067.1	Protein Homology	CDS	4437	4766	.	-	0	ID=cds-WP_015545335.1;Parent=gene-MSCD_RS02190;Dbxref=GenBank:WP_015545335.1;Name=WP_015545335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF045726.2;locus_tag=MSCD_RS02190;product=lipoprotein;protein_id=WP_015545335.1;transl_table=4
##sequence-region NZ_LAUX01000068.1 1 4665
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000068.1	RefSeq	region	1	4665	.	+	.	ID=NZ_LAUX01000068.1:1..4665;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000068.1	RefSeq	gene	1	599	.	-	.	ID=gene-MSCD_RS02195;Name=MSCD_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02195;partial=true;start_range=.,1
NZ_LAUX01000068.1	Protein Homology	CDS	1	599	.	-	0	ID=cds-WP_107682089.1;Parent=gene-MSCD_RS02195;Dbxref=GenBank:WP_107682089.1;Name=WP_107682089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862671.1;locus_tag=MSCD_RS02195;partial=true;product=hypothetical protein;protein_id=WP_107682089.1;start_range=.,1;transl_table=4
NZ_LAUX01000068.1	RefSeq	gene	699	1412	.	-	.	ID=gene-MSCD_RS02200;Name=MSCD_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02200;old_locus_tag=MSCd_3840
NZ_LAUX01000068.1	Protein Homology	CDS	699	1412	.	-	0	ID=cds-WP_015545296.1;Parent=gene-MSCD_RS02200;Dbxref=GenBank:WP_015545296.1;Name=WP_015545296.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862670.1;locus_tag=MSCD_RS02200;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_015545296.1;transl_table=4
NZ_LAUX01000068.1	RefSeq	gene	1424	2041	.	-	.	ID=gene-MSCD_RS02205;Name=MSCD_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02205;old_locus_tag=MSCd_3850
NZ_LAUX01000068.1	Protein Homology	CDS	1424	2041	.	-	0	ID=cds-WP_011166577.1;Parent=gene-MSCD_RS02205;Dbxref=GenBank:WP_011166577.1;Name=WP_011166577.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447881.1;locus_tag=MSCD_RS02205;product=deoxynucleoside kinase;protein_id=WP_011166577.1;transl_table=4
NZ_LAUX01000068.1	RefSeq	gene	2051	2809	.	-	.	ID=gene-MSCD_RS02210;Name=MSCD_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02210;old_locus_tag=MSCd_3860
NZ_LAUX01000068.1	Protein Homology	CDS	2051	2809	.	-	0	ID=cds-WP_015545336.1;Parent=gene-MSCD_RS02210;Dbxref=GenBank:WP_015545336.1;Name=WP_015545336.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447882.1;locus_tag=MSCD_RS02210;product=pseudouridine synthase;protein_id=WP_015545336.1;transl_table=4
NZ_LAUX01000068.1	RefSeq	gene	2877	3506	.	-	.	ID=gene-MSCD_RS02215;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=MSCD_RS02215;old_locus_tag=MSCd_3870
NZ_LAUX01000068.1	Protein Homology	CDS	2877	3506	.	-	0	ID=cds-WP_011166575.1;Parent=gene-MSCD_RS02215;Dbxref=GenBank:WP_011166575.1;Name=WP_011166575.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862668.1;locus_tag=MSCD_RS02215;product=SMC-Scp complex subunit ScpB;protein_id=WP_011166575.1;transl_table=4
NZ_LAUX01000068.1	RefSeq	gene	3490	4326	.	-	.	ID=gene-MSCD_RS02220;Name=MSCD_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02220;old_locus_tag=MSCd_3880
NZ_LAUX01000068.1	Protein Homology	CDS	3490	4326	.	-	0	ID=cds-WP_011166574.1;Parent=gene-MSCD_RS02220;Dbxref=GenBank:WP_011166574.1;Name=WP_011166574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447884.1;locus_tag=MSCD_RS02220;product=segregation/condensation protein A;protein_id=WP_011166574.1;transl_table=4
NZ_LAUX01000068.1	RefSeq	pseudogene	4336	4665	.	-	.	ID=gene-MSCD_RS05655;Name=MSCD_RS05655;end_range=4665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05655;partial=true;pseudo=true
NZ_LAUX01000068.1	Protein Homology	CDS	4336	4665	.	-	1	ID=cds-MSCD_RS05655;Parent=gene-MSCD_RS05655;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729493.1;locus_tag=MSCD_RS05655;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000069.1 1 3891
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000069.1	RefSeq	region	1	3891	.	+	.	ID=NZ_LAUX01000069.1:1..3891;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000069.1	RefSeq	gene	15	437	.	-	.	ID=gene-MSCD_RS05280;Name=MSCD_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05280;old_locus_tag=MSCd_3890
NZ_LAUX01000069.1	Protein Homology	CDS	15	437	.	-	0	ID=cds-WP_011166570.1;Parent=gene-MSCD_RS05280;Dbxref=GenBank:WP_011166570.1;Name=WP_011166570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166570.1;locus_tag=MSCD_RS05280;product=hypothetical protein;protein_id=WP_011166570.1;transl_table=4
NZ_LAUX01000069.1	RefSeq	gene	352	1122	.	-	.	ID=gene-MSCD_RS05285;Name=MSCD_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05285;old_locus_tag=MSCd_3900
NZ_LAUX01000069.1	Protein Homology	CDS	352	1122	.	-	0	ID=cds-WP_045610396.1;Parent=gene-MSCD_RS05285;Dbxref=GenBank:WP_045610396.1;Name=WP_045610396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025124.7;locus_tag=MSCD_RS05285;product=ATP-binding protein;protein_id=WP_045610396.1;transl_table=4
NZ_LAUX01000069.1	RefSeq	pseudogene	1156	1461	.	-	.	ID=gene-MSCD_RS05290;Name=MSCD_RS05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05290;partial=true;pseudo=true;start_range=.,1156
NZ_LAUX01000069.1	Protein Homology	CDS	1156	1461	.	-	0	ID=cds-MSCD_RS05290;Parent=gene-MSCD_RS05290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF016232.7;locus_tag=MSCD_RS05290;partial=true;product=AlbA family DNA-binding domain-containing protein;pseudo=true;start_range=.,1156;transl_table=4
NZ_LAUX01000069.1	RefSeq	gene	1732	2151	.	-	.	ID=gene-MSCD_RS02235;Name=MSCD_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02235;old_locus_tag=MSCd_3910
NZ_LAUX01000069.1	Protein Homology	CDS	1732	2151	.	-	0	ID=cds-WP_015545666.1;Parent=gene-MSCD_RS02235;Dbxref=GenBank:WP_015545666.1;Name=WP_015545666.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166568.1;locus_tag=MSCD_RS02235;product=lipoprotein;protein_id=WP_015545666.1;transl_table=4
NZ_LAUX01000069.1	RefSeq	gene	2440	2748	.	+	.	ID=gene-MSCD_RS05295;Name=MSCD_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05295;old_locus_tag=MSCd_3920
NZ_LAUX01000069.1	GeneMarkS-2+	CDS	2440	2748	.	+	0	ID=cds-WP_011166567.1;Parent=gene-MSCD_RS05295;Dbxref=GenBank:WP_011166567.1;Name=WP_011166567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05295;product=hypothetical protein;protein_id=WP_011166567.1;transl_table=4
NZ_LAUX01000069.1	RefSeq	gene	3023	3891	.	+	.	ID=gene-MSCD_RS02245;Name=trmFO;end_range=3891,.;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=MSCD_RS02245;partial=true
NZ_LAUX01000069.1	Protein Homology	CDS	3023	3891	.	+	0	ID=cds-WP_107682090.1;Parent=gene-MSCD_RS02245;Dbxref=GenBank:WP_107682090.1;Name=WP_107682090.1;Ontology_term=GO:0008033,GO:0050660;end_range=3891,.;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697905.1;locus_tag=MSCD_RS02245;partial=true;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_107682090.1;transl_table=4
##sequence-region NZ_LAUX01000070.1 1 7120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000070.1	RefSeq	region	1	7120	.	+	.	ID=NZ_LAUX01000070.1:1..7120;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000070.1	RefSeq	pseudogene	1	293	.	+	.	ID=gene-MSCD_RS02250;Name=MSCD_RS02250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02250;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000070.1	Protein Homology	CDS	1	293	.	+	2	ID=cds-MSCD_RS02250;Parent=gene-MSCD_RS02250;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697905.1;locus_tag=MSCD_RS02250;partial=true;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	398	1132	.	+	.	ID=gene-MSCD_RS02255;Name=MSCD_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02255;old_locus_tag=MSCd_3930
NZ_LAUX01000070.1	Protein Homology	CDS	398	1132	.	+	0	ID=cds-WP_011166565.1;Parent=gene-MSCD_RS02255;Dbxref=GenBank:WP_011166565.1;Name=WP_011166565.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729479.1;locus_tag=MSCD_RS02255;product=folate family ECF transporter S component;protein_id=WP_011166565.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	1254	1406	.	+	.	ID=gene-MSCD_RS02260;Name=MSCD_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02260;old_locus_tag=MSCd_3940
NZ_LAUX01000070.1	Protein Homology	CDS	1254	1406	.	+	0	ID=cds-WP_011166564.1;Parent=gene-MSCD_RS02260;Dbxref=GenBank:WP_011166564.1;Name=WP_011166564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166564.1;locus_tag=MSCD_RS02260;product=hypothetical protein;protein_id=WP_011166564.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	1465	3435	.	+	.	ID=gene-MSCD_RS02265;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=MSCD_RS02265;old_locus_tag=MSCd_3950
NZ_LAUX01000070.1	Protein Homology	CDS	1465	3435	.	+	0	ID=cds-WP_039275610.1;Parent=gene-MSCD_RS02265;Dbxref=GenBank:WP_039275610.1;Name=WP_039275610.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862658.1;locus_tag=MSCD_RS02265;product=transketolase;protein_id=WP_039275610.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	3451	3696	.	+	.	ID=gene-MSCD_RS02270;Name=MSCD_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02270;old_locus_tag=MSCd_3960
NZ_LAUX01000070.1	Protein Homology	CDS	3451	3696	.	+	0	ID=cds-WP_011166562.1;Parent=gene-MSCD_RS02270;Dbxref=GenBank:WP_011166562.1;Name=WP_011166562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862659.1;locus_tag=MSCD_RS02270;product=YneF family protein;protein_id=WP_011166562.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	3763	5307	.	+	.	ID=gene-MSCD_RS02275;Name=MSCD_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02275;old_locus_tag=MSCd_3970
NZ_LAUX01000070.1	Protein Homology	CDS	3763	5307	.	+	0	ID=cds-WP_011166561.1;Parent=gene-MSCD_RS02275;Dbxref=GenBank:WP_011166561.1;Name=WP_011166561.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862660.1;locus_tag=MSCD_RS02275;product=SNF2-related protein;protein_id=WP_011166561.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	5383	5529	.	+	.	ID=gene-MSCD_RS02280;Name=MSCD_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02280
NZ_LAUX01000070.1	GeneMarkS-2+	CDS	5383	5529	.	+	0	ID=cds-WP_011166560.1;Parent=gene-MSCD_RS02280;Dbxref=GenBank:WP_011166560.1;Name=WP_011166560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS02280;product=hypothetical protein;protein_id=WP_011166560.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	5538	6323	.	+	.	ID=gene-MSCD_RS02285;Name=MSCD_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02285;old_locus_tag=MSCd_3980
NZ_LAUX01000070.1	Protein Homology	CDS	5538	6323	.	+	0	ID=cds-WP_011166559.1;Parent=gene-MSCD_RS02285;Dbxref=GenBank:WP_011166559.1;Name=WP_011166559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862662.1;locus_tag=MSCD_RS02285;product=alpha/beta fold hydrolase;protein_id=WP_011166559.1;transl_table=4
NZ_LAUX01000070.1	RefSeq	gene	6421	6726	.	+	.	ID=gene-MSCD_RS02290;Name=MSCD_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02290;old_locus_tag=MSCd_3990
NZ_LAUX01000070.1	Protein Homology	CDS	6421	6726	.	+	0	ID=cds-WP_011166558.1;Parent=gene-MSCD_RS02290;Dbxref=GenBank:WP_011166558.1;Name=WP_011166558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166558.1;locus_tag=MSCD_RS02290;product=hypothetical protein;protein_id=WP_011166558.1;transl_table=4
##sequence-region NZ_LAUX01000071.1 1 1770
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000071.1	RefSeq	region	1	1770	.	+	.	ID=NZ_LAUX01000071.1:1..1770;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000071.1	RefSeq	gene	67	537	.	+	.	ID=gene-MSCD_RS02300;Name=MSCD_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02300;old_locus_tag=MSCd_4000
NZ_LAUX01000071.1	Protein Homology	CDS	67	537	.	+	0	ID=cds-WP_011166557.1;Parent=gene-MSCD_RS02300;Dbxref=GenBank:WP_011166557.1;Name=WP_011166557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166557.1;locus_tag=MSCD_RS02300;product=variable surface lipoprotein;protein_id=WP_011166557.1;transl_table=4
NZ_LAUX01000071.1	RefSeq	pseudogene	1588	1770	.	-	.	ID=gene-MSCD_RS05300;Name=MSCD_RS05300;end_range=1770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05300;partial=true;pseudo=true
NZ_LAUX01000071.1	Protein Homology	CDS	1588	1770	.	-	0	ID=cds-MSCD_RS05300;Parent=gene-MSCD_RS05300;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166555.1;locus_tag=MSCD_RS05300;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000072.1 1 21759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000072.1	RefSeq	region	1	21759	.	+	.	ID=NZ_LAUX01000072.1:1..21759;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000072.1	RefSeq	gene	1	464	.	-	.	ID=gene-MSCD_RS05305;Name=MSCD_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05305;partial=true;start_range=.,1
NZ_LAUX01000072.1	Protein Homology	CDS	1	464	.	-	0	ID=cds-WP_107326345.1;Parent=gene-MSCD_RS05305;Dbxref=GenBank:WP_107326345.1;Name=WP_107326345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166555.1;locus_tag=MSCD_RS05305;partial=true;product=hypothetical protein;protein_id=WP_107326345.1;start_range=.,1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	953	2023	.	+	.	ID=gene-MSCD_RS02315;Name=MSCD_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02315;old_locus_tag=MSCd_4020
NZ_LAUX01000072.1	Protein Homology	CDS	953	2023	.	+	0	ID=cds-WP_011166554.1;Parent=gene-MSCD_RS02315;Dbxref=GenBank:WP_011166554.1;Name=WP_011166554.1;Ontology_term=GO:0006310;gbkey=CDS;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166554.1;locus_tag=MSCD_RS02315;product=DNA recombination protein RmuC;protein_id=WP_011166554.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	2253	2885	.	-	.	ID=gene-MSCD_RS02320;Name=MSCD_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02320;old_locus_tag=MSCd_4030
NZ_LAUX01000072.1	Protein Homology	CDS	2253	2885	.	-	0	ID=cds-WP_011166553.1;Parent=gene-MSCD_RS02320;Dbxref=GenBank:WP_011166553.1;Name=WP_011166553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166553.1;locus_tag=MSCD_RS02320;product=hypothetical protein;protein_id=WP_011166553.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	2998	3867	.	+	.	ID=gene-MSCD_RS02325;Name=MSCD_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02325;old_locus_tag=MSCd_4040
NZ_LAUX01000072.1	Protein Homology	CDS	2998	3867	.	+	0	ID=cds-WP_015545599.1;Parent=gene-MSCD_RS02325;Dbxref=GenBank:WP_015545599.1;Name=WP_015545599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862652.1;locus_tag=MSCD_RS02325;product=SAV1803-related protein;protein_id=WP_015545599.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	3896	4906	.	-	.	ID=gene-MSCD_RS02330;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=MSCD_RS02330;old_locus_tag=MSCd_4050
NZ_LAUX01000072.1	Protein Homology	CDS	3896	4906	.	-	0	ID=cds-WP_011166551.1;Parent=gene-MSCD_RS02330;Dbxref=GenBank:WP_011166551.1;Name=WP_011166551.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862651.1;locus_tag=MSCD_RS02330;product=tryptophan--tRNA ligase;protein_id=WP_011166551.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	5051	6127	.	+	.	ID=gene-MSCD_RS02335;Name=MSCD_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02335;old_locus_tag=MSCd_4060
NZ_LAUX01000072.1	Protein Homology	CDS	5051	6127	.	+	0	ID=cds-WP_015545634.1;Parent=gene-MSCD_RS02335;Dbxref=GenBank:WP_015545634.1;Name=WP_015545634.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545634.1;locus_tag=MSCD_RS02335;product=M24 family metallopeptidase;protein_id=WP_015545634.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	6327	7352	.	+	.	ID=gene-MSCD_RS02340;Name=MSCD_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02340;old_locus_tag=MSCd_4070
NZ_LAUX01000072.1	Protein Homology	CDS	6327	7352	.	+	0	ID=cds-WP_011166549.1;Parent=gene-MSCD_RS02340;Dbxref=GenBank:WP_011166549.1;Name=WP_011166549.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729470.1;locus_tag=MSCD_RS02340;product=phosphatidate cytidylyltransferase;protein_id=WP_011166549.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	7361	11809	.	+	.	ID=gene-MSCD_RS02345;Name=MSCD_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02345;old_locus_tag=MSCd_4080
NZ_LAUX01000072.1	Protein Homology	CDS	7361	11809	.	+	0	ID=cds-WP_011166548.1;Parent=gene-MSCD_RS02345;Dbxref=GenBank:WP_011166548.1;Name=WP_011166548.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862648.1;locus_tag=MSCD_RS02345;product=PolC-type DNA polymerase III;protein_id=WP_011166548.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	11822	12472	.	+	.	ID=gene-MSCD_RS02350;Name=MSCD_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02350;old_locus_tag=MSCd_4090
NZ_LAUX01000072.1	Protein Homology	CDS	11822	12472	.	+	0	ID=cds-WP_011166547.1;Parent=gene-MSCD_RS02350;Dbxref=GenBank:WP_011166547.1;Name=WP_011166547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729468.1;locus_tag=MSCD_RS02350;product=nitroreductase family protein;protein_id=WP_011166547.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	12586	13080	.	+	.	ID=gene-MSCD_RS02355;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=MSCD_RS02355;old_locus_tag=MSCd_4100
NZ_LAUX01000072.1	Protein Homology	CDS	12586	13080	.	+	0	ID=cds-WP_011166546.1;Parent=gene-MSCD_RS02355;Dbxref=GenBank:WP_011166546.1;Name=WP_011166546.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862646.1;locus_tag=MSCD_RS02355;product=ribosome maturation factor RimP;protein_id=WP_011166546.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	13089	14717	.	+	.	ID=gene-MSCD_RS02360;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=MSCD_RS02360;old_locus_tag=MSCd_4110
NZ_LAUX01000072.1	Protein Homology	CDS	13089	14717	.	+	0	ID=cds-WP_258177026.1;Parent=gene-MSCD_RS02360;Dbxref=GenBank:WP_258177026.1;Name=WP_258177026.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004427884.1;locus_tag=MSCD_RS02360;product=transcription termination factor NusA;protein_id=WP_258177026.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	14647	14841	.	+	.	ID=gene-MSCD_RS05310;Name=MSCD_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05310
NZ_LAUX01000072.1	GeneMarkS-2+	CDS	14647	14841	.	+	0	ID=cds-WP_258177027.1;Parent=gene-MSCD_RS05310;Dbxref=GenBank:WP_258177027.1;Name=WP_258177027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05310;product=hypothetical protein;protein_id=WP_258177027.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	14816	15103	.	+	.	ID=gene-MSCD_RS02365;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=MSCD_RS02365;old_locus_tag=MSCd_4120
NZ_LAUX01000072.1	Protein Homology	CDS	14816	15103	.	+	0	ID=cds-WP_011166544.1;Parent=gene-MSCD_RS02365;Dbxref=GenBank:WP_011166544.1;Name=WP_011166544.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166544.1;locus_tag=MSCD_RS02365;product=RNase P modulator RnpM;protein_id=WP_011166544.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	15090	15389	.	+	.	ID=gene-MSCD_RS02370;Name=MSCD_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02370;old_locus_tag=MSCd_4130
NZ_LAUX01000072.1	Protein Homology	CDS	15090	15389	.	+	0	ID=cds-WP_011166543.1;Parent=gene-MSCD_RS02370;Dbxref=GenBank:WP_011166543.1;Name=WP_011166543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364486.1;locus_tag=MSCD_RS02370;product=L7Ae/L30e/S12e/Gadd45 family ribosomal protein;protein_id=WP_011166543.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	15411	17273	.	+	.	ID=gene-MSCD_RS02375;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=MSCD_RS02375;old_locus_tag=MSCd_4140
NZ_LAUX01000072.1	Protein Homology	CDS	15411	17273	.	+	0	ID=cds-WP_011166542.1;Parent=gene-MSCD_RS02375;Dbxref=GenBank:WP_011166542.1;Name=WP_011166542.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862643.1;locus_tag=MSCD_RS02375;product=translation initiation factor IF-2;protein_id=WP_011166542.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	17292	17936	.	-	.	ID=gene-MSCD_RS02380;Name=MSCD_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02380;old_locus_tag=MSCd_4150
NZ_LAUX01000072.1	Protein Homology	CDS	17292	17936	.	-	0	ID=cds-WP_011166541.1;Parent=gene-MSCD_RS02380;Dbxref=GenBank:WP_011166541.1;Name=WP_011166541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697919.1;locus_tag=MSCD_RS02380;product=DxFTY motif-containing membrane protein;protein_id=WP_011166541.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	18035	18108	.	-	.	ID=gene-MSCD_RS02385;Name=MSCD_RS02385;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS02385;old_locus_tag=MSCd_4160
NZ_LAUX01000072.1	tRNAscan-SE	tRNA	18035	18108	.	-	.	ID=rna-MSCD_RS02385;Parent=gene-MSCD_RS02385;anticodon=(pos:complement(18074..18076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS02385;product=tRNA-Gly
NZ_LAUX01000072.1	tRNAscan-SE	exon	18035	18108	.	-	.	ID=exon-MSCD_RS02385-1;Parent=rna-MSCD_RS02385;anticodon=(pos:complement(18074..18076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS02385;product=tRNA-Gly
NZ_LAUX01000072.1	RefSeq	gene	18168	18434	.	-	.	ID=gene-MSCD_RS02390;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=MSCD_RS02390;old_locus_tag=MSCd_4170
NZ_LAUX01000072.1	Protein Homology	CDS	18168	18434	.	-	0	ID=cds-WP_011166540.1;Parent=gene-MSCD_RS02390;Dbxref=GenBank:WP_011166540.1;Name=WP_011166540.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166540.1;locus_tag=MSCD_RS02390;product=30S ribosomal protein S15;protein_id=WP_011166540.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	gene	18647	20425	.	+	.	ID=gene-MSCD_RS04880;Name=MSCD_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04880;old_locus_tag=MSCd_4180
NZ_LAUX01000072.1	Protein Homology	CDS	18647	20425	.	+	0	ID=cds-WP_045596496.1;Parent=gene-MSCD_RS04880;Dbxref=GenBank:WP_045596496.1;Name=WP_045596496.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545362.1;locus_tag=MSCD_RS04880;product=S41 family peptidase;protein_id=WP_045596496.1;transl_table=4
NZ_LAUX01000072.1	RefSeq	pseudogene	20450	21759	.	+	.	ID=gene-MSCD_RS05775;Name=MSCD_RS05775;end_range=21759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05775;partial=true;pseudo=true
NZ_LAUX01000072.1	Protein Homology	CDS	20450	21759	.	+	0	ID=cds-MSCD_RS05775;Parent=gene-MSCD_RS05775;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=21759,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729460.1;locus_tag=MSCD_RS05775;partial=true;product=S41 family peptidase;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000073.1 1 5303
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000073.1	RefSeq	region	1	5303	.	+	.	ID=NZ_LAUX01000073.1:1..5303;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000073.1	RefSeq	pseudogene	1	291	.	+	.	ID=gene-MSCD_RS04885;Name=MSCD_RS04885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04885;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000073.1	Protein Homology	CDS	1	291	.	+	0	ID=cds-MSCD_RS04885;Parent=gene-MSCD_RS04885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729460.1;locus_tag=MSCD_RS04885;partial=true;product=S41 family peptidase;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000073.1	RefSeq	gene	314	868	.	-	.	ID=gene-MSCD_RS02420;Name=MSCD_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02420;old_locus_tag=MSCd_4190
NZ_LAUX01000073.1	Protein Homology	CDS	314	868	.	-	0	ID=cds-WP_011166533.1;Parent=gene-MSCD_RS02420;Dbxref=GenBank:WP_011166533.1;Name=WP_011166533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862639.1;locus_tag=MSCD_RS02420;product=nucleotidyl transferase family protein;protein_id=WP_011166533.1;transl_table=4
NZ_LAUX01000073.1	RefSeq	gene	855	1733	.	-	.	ID=gene-MSCD_RS02425;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=MSCD_RS02425;old_locus_tag=MSCd_4200
NZ_LAUX01000073.1	Protein Homology	CDS	855	1733	.	-	0	ID=cds-WP_011166532.1;Parent=gene-MSCD_RS02425;Dbxref=GenBank:WP_011166532.1;Name=WP_011166532.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729458.1;locus_tag=MSCD_RS02425;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_011166532.1;transl_table=4
NZ_LAUX01000073.1	RefSeq	gene	1783	2136	.	-	.	ID=gene-MSCD_RS02430;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=MSCD_RS02430;old_locus_tag=MSCd_4210
NZ_LAUX01000073.1	Protein Homology	CDS	1783	2136	.	-	0	ID=cds-WP_011166531.1;Parent=gene-MSCD_RS02430;Dbxref=GenBank:WP_011166531.1;Name=WP_011166531.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269335.1;locus_tag=MSCD_RS02430;product=30S ribosome-binding factor RbfA;protein_id=WP_011166531.1;transl_table=4
NZ_LAUX01000073.1	RefSeq	gene	2321	3565	.	+	.	ID=gene-MSCD_RS02435;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=MSCD_RS02435;old_locus_tag=MSCd_4220
NZ_LAUX01000073.1	Protein Homology	CDS	2321	3565	.	+	0	ID=cds-WP_011166530.1;Parent=gene-MSCD_RS02435;Dbxref=GenBank:WP_011166530.1;Name=WP_011166530.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447644.1;locus_tag=MSCD_RS02435;product=histidine--tRNA ligase;protein_id=WP_011166530.1;transl_table=4
NZ_LAUX01000073.1	RefSeq	gene	3574	5298	.	+	.	ID=gene-MSCD_RS02440;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=MSCD_RS02440;old_locus_tag=MSCd_4230
NZ_LAUX01000073.1	Protein Homology	CDS	3574	5298	.	+	0	ID=cds-WP_011166529.1;Parent=gene-MSCD_RS02440;Dbxref=GenBank:WP_011166529.1;Name=WP_011166529.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862635.1;locus_tag=MSCD_RS02440;product=aspartate--tRNA ligase;protein_id=WP_011166529.1;transl_table=4
##sequence-region NZ_LAUX01000074.1 1 6319
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000074.1	RefSeq	region	1	6319	.	+	.	ID=NZ_LAUX01000074.1:1..6319;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000074.1	RefSeq	gene	1	841	.	-	.	ID=gene-MSCD_RS02445;Name=MSCD_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02445;partial=true;start_range=.,1
NZ_LAUX01000074.1	Protein Homology	CDS	1	841	.	-	0	ID=cds-WP_107682091.1;Parent=gene-MSCD_RS02445;Dbxref=GenBank:WP_107682091.1;Name=WP_107682091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166527.1;locus_tag=MSCD_RS02445;partial=true;product=hypothetical protein;protein_id=WP_107682091.1;start_range=.,1;transl_table=4
NZ_LAUX01000074.1	RefSeq	gene	868	2670	.	-	.	ID=gene-MSCD_RS02450;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=MSCD_RS02450;old_locus_tag=MSCd_4240
NZ_LAUX01000074.1	Protein Homology	CDS	868	2670	.	-	0	ID=cds-WP_011166526.1;Parent=gene-MSCD_RS02450;Dbxref=GenBank:WP_011166526.1;Name=WP_011166526.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364471.1;locus_tag=MSCD_RS02450;product=translation elongation factor 4;protein_id=WP_011166526.1;transl_table=4
NZ_LAUX01000074.1	RefSeq	gene	2694	3581	.	-	.	ID=gene-MSCD_RS02455;Name=MSCD_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02455;old_locus_tag=MSCd_4250
NZ_LAUX01000074.1	Protein Homology	CDS	2694	3581	.	-	0	ID=cds-WP_011166525.1;Parent=gene-MSCD_RS02455;Dbxref=GenBank:WP_011166525.1;Name=WP_011166525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862633.1;locus_tag=MSCD_RS02455;product=serine aminopeptidase domain-containing protein;protein_id=WP_011166525.1;transl_table=4
NZ_LAUX01000074.1	RefSeq	gene	3583	4200	.	-	.	ID=gene-MSCD_RS02460;Name=MSCD_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02460;old_locus_tag=MSCd_4260
NZ_LAUX01000074.1	Protein Homology	CDS	3583	4200	.	-	0	ID=cds-WP_015545652.1;Parent=gene-MSCD_RS02460;Dbxref=GenBank:WP_015545652.1;Name=WP_015545652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729451.1;locus_tag=MSCD_RS02460;product=ribonuclease H1 domain-containing protein;protein_id=WP_015545652.1;transl_table=4
NZ_LAUX01000074.1	RefSeq	gene	4213	5637	.	-	.	ID=gene-MSCD_RS02465;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=MSCD_RS02465;old_locus_tag=MSCd_4270
NZ_LAUX01000074.1	Protein Homology	CDS	4213	5637	.	-	0	ID=cds-WP_015545294.1;Parent=gene-MSCD_RS02465;Dbxref=GenBank:WP_015545294.1;Name=WP_015545294.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269328.1;locus_tag=MSCD_RS02465;product=proline--tRNA ligase;protein_id=WP_015545294.1;transl_table=4
NZ_LAUX01000074.1	RefSeq	gene	5618	6298	.	-	.	ID=gene-MSCD_RS02470;Name=MSCD_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02470;old_locus_tag=MSCd_4280
NZ_LAUX01000074.1	Protein Homology	CDS	5618	6298	.	-	0	ID=cds-WP_011166522.1;Parent=gene-MSCD_RS02470;Dbxref=GenBank:WP_011166522.1;Name=WP_011166522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166522.1;locus_tag=MSCD_RS02470;product=hypothetical protein;protein_id=WP_011166522.1;transl_table=4
##sequence-region NZ_LAUX01000075.1 1 6665
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000075.1	RefSeq	region	1	6665	.	+	.	ID=NZ_LAUX01000075.1:1..6665;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000075.1	RefSeq	gene	303	2135	.	+	.	ID=gene-MSCD_RS02475;Name=MSCD_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02475;old_locus_tag=MSCd_4290
NZ_LAUX01000075.1	Protein Homology	CDS	303	2135	.	+	0	ID=cds-WP_011166520.1;Parent=gene-MSCD_RS02475;Dbxref=GenBank:WP_011166520.1;Name=WP_011166520.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166520.1;locus_tag=MSCD_RS02475;product=ABC transporter permease;protein_id=WP_011166520.1;transl_table=4
NZ_LAUX01000075.1	RefSeq	gene	2138	2842	.	+	.	ID=gene-MSCD_RS02480;Name=MSCD_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02480;old_locus_tag=MSCd_4300
NZ_LAUX01000075.1	Protein Homology	CDS	2138	2842	.	+	0	ID=cds-WP_011166519.1;Parent=gene-MSCD_RS02480;Dbxref=GenBank:WP_011166519.1;Name=WP_011166519.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448035.1;locus_tag=MSCD_RS02480;product=ABC transporter ATP-binding protein;protein_id=WP_011166519.1;transl_table=4
NZ_LAUX01000075.1	RefSeq	gene	2820	3947	.	+	.	ID=gene-MSCD_RS02485;Name=MSCD_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02485;old_locus_tag=MSCd_4310
NZ_LAUX01000075.1	Protein Homology	CDS	2820	3947	.	+	0	ID=cds-WP_011166518.1;Parent=gene-MSCD_RS02485;Dbxref=GenBank:WP_011166518.1;Name=WP_011166518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166518.1;locus_tag=MSCD_RS02485;product=aromatic motif membrane protein;protein_id=WP_011166518.1;transl_table=4
NZ_LAUX01000075.1	RefSeq	gene	3940	4800	.	+	.	ID=gene-MSCD_RS02490;Name=MSCD_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02490;old_locus_tag=MSCd_4320
NZ_LAUX01000075.1	Protein Homology	CDS	3940	4800	.	+	0	ID=cds-WP_011166517.1;Parent=gene-MSCD_RS02490;Dbxref=GenBank:WP_011166517.1;Name=WP_011166517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166517.1;locus_tag=MSCD_RS02490;product=aromatic motif membrane protein;protein_id=WP_011166517.1;transl_table=4
NZ_LAUX01000075.1	RefSeq	gene	4790	5659	.	+	.	ID=gene-MSCD_RS02495;Name=MSCD_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02495;old_locus_tag=MSCd_4330
NZ_LAUX01000075.1	Protein Homology	CDS	4790	5659	.	+	0	ID=cds-WP_011166516.1;Parent=gene-MSCD_RS02495;Dbxref=GenBank:WP_011166516.1;Name=WP_011166516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584523.1;locus_tag=MSCD_RS02495;product=aromatic motif membrane protein;protein_id=WP_011166516.1;transl_table=4
NZ_LAUX01000075.1	RefSeq	gene	6385	6513	.	+	.	ID=gene-MSCD_RS05320;Name=MSCD_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05320
NZ_LAUX01000075.1	GeneMarkS-2+	CDS	6385	6513	.	+	0	ID=cds-WP_015545500.1;Parent=gene-MSCD_RS05320;Dbxref=GenBank:WP_015545500.1;Name=WP_015545500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05320;product=hypothetical protein;protein_id=WP_015545500.1;transl_table=4
##sequence-region NZ_LAUX01000076.1 1 2888
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000076.1	RefSeq	region	1	2888	.	+	.	ID=NZ_LAUX01000076.1:1..2888;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000076.1	RefSeq	gene	11	373	.	-	.	ID=gene-MSCD_RS05325;Name=MSCD_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05325;old_locus_tag=MSCd_4350
NZ_LAUX01000076.1	Protein Homology	CDS	11	373	.	-	0	ID=cds-WP_011166515.1;Parent=gene-MSCD_RS05325;Dbxref=GenBank:WP_011166515.1;Name=WP_011166515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166515.1;locus_tag=MSCD_RS05325;product=hypothetical protein;protein_id=WP_011166515.1;transl_table=4
NZ_LAUX01000076.1	RefSeq	gene	388	657	.	-	.	ID=gene-MSCD_RS05330;Name=MSCD_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05330;old_locus_tag=MSCd_4360
NZ_LAUX01000076.1	Protein Homology	CDS	388	657	.	-	0	ID=cds-WP_011166514.1;Parent=gene-MSCD_RS05330;Dbxref=GenBank:WP_011166514.1;Name=WP_011166514.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166514.1;locus_tag=MSCD_RS05330;product=lipoprotein;protein_id=WP_011166514.1;transl_table=4
NZ_LAUX01000076.1	RefSeq	gene	672	2888	.	-	.	ID=gene-MSCD_RS02510;Name=MSCD_RS02510;end_range=2888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02510;partial=true
NZ_LAUX01000076.1	Protein Homology	CDS	672	2888	.	-	0	ID=cds-WP_107682092.1;Parent=gene-MSCD_RS02510;Dbxref=GenBank:WP_107682092.1;Name=WP_107682092.1;end_range=2888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862625.1;locus_tag=MSCD_RS02510;partial=true;product=STREFT protein;protein_id=WP_107682092.1;transl_table=4
##sequence-region NZ_LAUX01000077.1 1 6909
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000077.1	RefSeq	region	1	6909	.	+	.	ID=NZ_LAUX01000077.1:1..6909;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000077.1	RefSeq	pseudogene	1	5307	.	+	.	ID=gene-MSCD_RS04895;Name=MSCD_RS04895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04895;pseudo=true
NZ_LAUX01000077.1	Protein Homology	CDS	1	5307	.	+	0	ID=cds-MSCD_RS04895;Parent=gene-MSCD_RS04895;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862624.1;locus_tag=MSCD_RS04895;product=ABC transporter permease;pseudo=true;transl_table=4
NZ_LAUX01000077.1	RefSeq	gene	5342	5905	.	-	.	ID=gene-MSCD_RS02535;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=MSCD_RS02535;old_locus_tag=MSCd_4400
NZ_LAUX01000077.1	Protein Homology	CDS	5342	5905	.	-	0	ID=cds-WP_011166509.1;Parent=gene-MSCD_RS02535;Dbxref=GenBank:WP_011166509.1;Name=WP_011166509.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862623.1;locus_tag=MSCD_RS02535;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_011166509.1;transl_table=4
NZ_LAUX01000077.1	RefSeq	gene	5907	6323	.	-	.	ID=gene-MSCD_RS02540;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=MSCD_RS02540;old_locus_tag=MSCd_4410
NZ_LAUX01000077.1	Protein Homology	CDS	5907	6323	.	-	0	ID=cds-WP_015545512.1;Parent=gene-MSCD_RS02540;Dbxref=GenBank:WP_015545512.1;Name=WP_015545512.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364458.1;locus_tag=MSCD_RS02540;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_015545512.1;transl_table=4
NZ_LAUX01000077.1	RefSeq	pseudogene	6443	6909	.	+	.	ID=gene-MSCD_RS02545;Name=MSCD_RS02545;end_range=6909,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS02545;partial=true;pseudo=true
NZ_LAUX01000077.1	Protein Homology	CDS	6443	6909	.	+	0	ID=cds-MSCD_RS02545;Parent=gene-MSCD_RS02545;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862621.1;locus_tag=MSCD_RS02545;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000078.1 1 18023
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000078.1	RefSeq	region	1	18023	.	+	.	ID=NZ_LAUX01000078.1:1..18023;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000078.1	RefSeq	pseudogene	278	1022	.	+	.	ID=gene-MSCD_RS05660;Name=MSCD_RS05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05660;pseudo=true
NZ_LAUX01000078.1	Protein Homology	CDS	278	1022	.	+	0	ID=cds-MSCD_RS05660;Parent=gene-MSCD_RS05660;Note=frameshifted;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729381.1;locus_tag=MSCD_RS05660;product=PP2C family protein-serine/threonine phosphatase;pseudo=true;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	1022	2137	.	+	.	ID=gene-MSCD_RS02565;Name=MSCD_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02565;old_locus_tag=MSCd_4440
NZ_LAUX01000078.1	Protein Homology	CDS	1022	2137	.	+	0	ID=cds-WP_011166504.1;Parent=gene-MSCD_RS02565;Dbxref=GenBank:WP_011166504.1;Name=WP_011166504.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863089.1;locus_tag=MSCD_RS02565;product=serine/threonine-protein kinase;protein_id=WP_011166504.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	2147	3049	.	+	.	ID=gene-MSCD_RS02570;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=MSCD_RS02570;old_locus_tag=MSCd_4450
NZ_LAUX01000078.1	Protein Homology	CDS	2147	3049	.	+	0	ID=cds-WP_011166503.1;Parent=gene-MSCD_RS02570;Dbxref=GenBank:WP_011166503.1;Name=WP_011166503.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166503.1;locus_tag=MSCD_RS02570;product=ribosome small subunit-dependent GTPase A;protein_id=WP_011166503.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	3051	3728	.	+	.	ID=gene-MSCD_RS02575;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=MSCD_RS02575;old_locus_tag=MSCd_4460
NZ_LAUX01000078.1	Protein Homology	CDS	3051	3728	.	+	0	ID=cds-WP_011166502.1;Parent=gene-MSCD_RS02575;Dbxref=GenBank:WP_011166502.1;Name=WP_011166502.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862619.1;locus_tag=MSCD_RS02575;product=ribulose-phosphate 3-epimerase;protein_id=WP_011166502.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	3718	4344	.	+	.	ID=gene-MSCD_RS02580;Name=MSCD_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02580;old_locus_tag=MSCd_4470
NZ_LAUX01000078.1	Protein Homology	CDS	3718	4344	.	+	0	ID=cds-WP_015545668.1;Parent=gene-MSCD_RS02580;Dbxref=GenBank:WP_015545668.1;Name=WP_015545668.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862618.1;locus_tag=MSCD_RS02580;product=thiamine diphosphokinase;protein_id=WP_015545668.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	4431	7049	.	+	.	ID=gene-MSCD_RS02585;Name=MSCD_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02585;old_locus_tag=MSCd_4480
NZ_LAUX01000078.1	Protein Homology	CDS	4431	7049	.	+	0	ID=cds-WP_011166500.1;Parent=gene-MSCD_RS02585;Dbxref=GenBank:WP_011166500.1;Name=WP_011166500.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166500.1;locus_tag=MSCD_RS02585;product=valine--tRNA ligase;protein_id=WP_011166500.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	7160	7957	.	+	.	ID=gene-MSCD_RS02590;Name=MSCD_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02590;old_locus_tag=MSCd_4490
NZ_LAUX01000078.1	Protein Homology	CDS	7160	7957	.	+	0	ID=cds-WP_015545431.1;Parent=gene-MSCD_RS02590;Dbxref=GenBank:WP_015545431.1;Name=WP_015545431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862616.1;locus_tag=MSCD_RS02590;product=diacylglycerol kinase catalytic domain-containing protein;protein_id=WP_015545431.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	7969	8688	.	+	.	ID=gene-MSCD_RS02595;Name=MSCD_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02595;old_locus_tag=MSCd_4500
NZ_LAUX01000078.1	Protein Homology	CDS	7969	8688	.	+	0	ID=cds-WP_011166498.1;Parent=gene-MSCD_RS02595;Dbxref=GenBank:WP_011166498.1;Name=WP_011166498.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387143.1;locus_tag=MSCD_RS02595;product=SDR family oxidoreductase;protein_id=WP_011166498.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	8814	10565	.	+	.	ID=gene-MSCD_RS02600;Name=MSCD_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02600;old_locus_tag=MSCd_4510
NZ_LAUX01000078.1	Protein Homology	CDS	8814	10565	.	+	0	ID=cds-WP_011166497.1;Parent=gene-MSCD_RS02600;Dbxref=GenBank:WP_011166497.1;Name=WP_011166497.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697946.1;locus_tag=MSCD_RS02600;product=ribonuclease J;protein_id=WP_011166497.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	10670	12292	.	+	.	ID=gene-MSCD_RS02605;Name=MSCD_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02605;old_locus_tag=MSCd_4520
NZ_LAUX01000078.1	Protein Homology	CDS	10670	12292	.	+	0	ID=cds-WP_011166496.1;Parent=gene-MSCD_RS02605;Dbxref=GenBank:WP_011166496.1;Name=WP_011166496.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166496.1;locus_tag=MSCD_RS02605;product=APC family permease;protein_id=WP_011166496.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	12357	13418	.	+	.	ID=gene-MSCD_RS02610;Name=MSCD_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02610;old_locus_tag=MSCd_4530
NZ_LAUX01000078.1	Protein Homology	CDS	12357	13418	.	+	0	ID=cds-WP_011166495.1;Parent=gene-MSCD_RS02610;Dbxref=GenBank:WP_011166495.1;Name=WP_011166495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862613.1;locus_tag=MSCD_RS02610;product=membrane protein;protein_id=WP_011166495.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	13428	15182	.	+	.	ID=gene-MSCD_RS02615;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=MSCD_RS02615;old_locus_tag=MSCd_4540
NZ_LAUX01000078.1	Protein Homology	CDS	13428	15182	.	+	0	ID=cds-WP_011166494.1;Parent=gene-MSCD_RS02615;Dbxref=GenBank:WP_011166494.1;Name=WP_011166494.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166494.1;locus_tag=MSCD_RS02615;product=excinuclease ABC subunit UvrC;protein_id=WP_011166494.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	15305	15778	.	+	.	ID=gene-MSCD_RS02620;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=MSCD_RS02620;old_locus_tag=MSCd_4550
NZ_LAUX01000078.1	Protein Homology	CDS	15305	15778	.	+	0	ID=cds-WP_011166493.1;Parent=gene-MSCD_RS02620;Dbxref=GenBank:WP_011166493.1;Name=WP_011166493.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697950.1;locus_tag=MSCD_RS02620;product=transcription elongation factor GreA;protein_id=WP_011166493.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	15821	16543	.	+	.	ID=gene-MSCD_RS02625;Name=MSCD_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02625;old_locus_tag=MSCd_4560
NZ_LAUX01000078.1	Protein Homology	CDS	15821	16543	.	+	0	ID=cds-WP_011166492.1;Parent=gene-MSCD_RS02625;Dbxref=GenBank:WP_011166492.1;Name=WP_011166492.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008364438.1;locus_tag=MSCD_RS02625;product=SDR family oxidoreductase;protein_id=WP_011166492.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	16544	17236	.	-	.	ID=gene-MSCD_RS02630;Name=MSCD_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02630;old_locus_tag=MSCd_4570
NZ_LAUX01000078.1	Protein Homology	CDS	16544	17236	.	-	0	ID=cds-WP_011166491.1;Parent=gene-MSCD_RS02630;Dbxref=GenBank:WP_011166491.1;Name=WP_011166491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862610.1;locus_tag=MSCD_RS02630;product=hypothetical protein;protein_id=WP_011166491.1;transl_table=4
NZ_LAUX01000078.1	RefSeq	gene	17318	18007	.	+	.	ID=gene-MSCD_RS02635;Name=MSCD_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS02635;old_locus_tag=MSCd_4580
NZ_LAUX01000078.1	Protein Homology	CDS	17318	18007	.	+	0	ID=cds-WP_011166490.1;Parent=gene-MSCD_RS02635;Dbxref=GenBank:WP_011166490.1;Name=WP_011166490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269255.1;locus_tag=MSCD_RS02635;product=hypothetical protein;protein_id=WP_011166490.1;transl_table=4
##sequence-region NZ_LAUX01000137.1 1 1889
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000137.1	RefSeq	region	1	1889	.	+	.	ID=NZ_LAUX01000137.1:1..1889;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000137.1	RefSeq	gene	15	1889	.	-	.	ID=gene-MSCD_RS04525;Name=MSCD_RS04525;end_range=1889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04525;partial=true
NZ_LAUX01000137.1	Protein Homology	CDS	15	1889	.	-	0	ID=cds-WP_258177047.1;Parent=gene-MSCD_RS04525;Dbxref=GenBank:WP_258177047.1;Name=WP_258177047.1;Ontology_term=GO:0006508,GO:0008236;end_range=1889,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166478.1;locus_tag=MSCD_RS04525;partial=true;product=S41 family peptidase;protein_id=WP_258177047.1;transl_table=4
##sequence-region NZ_LAUX01000138.1 1 630
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000138.1	RefSeq	region	1	630	.	+	.	ID=NZ_LAUX01000138.1:1..630;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000138.1	RefSeq	pseudogene	1	552	.	-	.	ID=gene-MSCD_RS04530;Name=MSCD_RS04530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04530;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000138.1	Protein Homology	CDS	1	552	.	-	0	ID=cds-MSCD_RS04530;Parent=gene-MSCD_RS04530;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729492.1;locus_tag=MSCD_RS04530;partial=true;product=MFS cation transporter;pseudo=true;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000139.1 1 1737
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000139.1	RefSeq	region	1	1737	.	+	.	ID=NZ_LAUX01000139.1:1..1737;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000139.1	RefSeq	gene	18	1737	.	-	.	ID=gene-MSCD_RS04535;Name=MSCD_RS04535;end_range=1737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04535;partial=true
NZ_LAUX01000139.1	Protein Homology	CDS	18	1737	.	-	1	ID=cds-WP_107326339.1;Parent=gene-MSCD_RS04535;Dbxref=GenBank:WP_107326339.1;Name=WP_107326339.1;end_range=1737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729641.1;locus_tag=MSCD_RS04535;partial=true;product=hypothetical protein;protein_id=WP_107326339.1;transl_table=4
##sequence-region NZ_LAUX01000140.1 1 502
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000140.1	RefSeq	region	1	502	.	+	.	ID=NZ_LAUX01000140.1:1..502;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000140.1	RefSeq	gene	234	413	.	-	.	ID=gene-MSCD_RS04540;Name=MSCD_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04540;old_locus_tag=MSCd_7880
NZ_LAUX01000140.1	Protein Homology	CDS	234	413	.	-	0	ID=cds-WP_011166579.1;Parent=gene-MSCD_RS04540;Dbxref=GenBank:WP_011166579.1;Name=WP_011166579.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166579.1;locus_tag=MSCD_RS04540;product=lipoprotein;protein_id=WP_011166579.1;transl_table=4
##sequence-region NZ_LAUX01000141.1 1 1611
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000141.1	RefSeq	region	1	1611	.	+	.	ID=NZ_LAUX01000141.1:1..1611;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000141.1	RefSeq	gene	88	552	.	+	.	ID=gene-MSCD_RS04545;Name=MSCD_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04545;old_locus_tag=MSCd_7890
NZ_LAUX01000141.1	Protein Homology	CDS	88	552	.	+	0	ID=cds-WP_013448131.1;Parent=gene-MSCD_RS04545;Dbxref=GenBank:WP_013448131.1;Name=WP_013448131.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729860.1;locus_tag=MSCD_RS04545;product=helix-turn-helix domain-containing protein;protein_id=WP_013448131.1;transl_table=4
NZ_LAUX01000141.1	RefSeq	gene	599	1252	.	-	.	ID=gene-MSCD_RS04550;Name=MSCD_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04550;old_locus_tag=MSCd_7900
NZ_LAUX01000141.1	Protein Homology	CDS	599	1252	.	-	0	ID=cds-WP_011166995.1;Parent=gene-MSCD_RS04550;Dbxref=GenBank:WP_011166995.1;Name=WP_011166995.1;Ontology_term=GO:0009116,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862957.1;locus_tag=MSCD_RS04550;product=phosphorylase family protein;protein_id=WP_011166995.1;transl_table=4
##sequence-region NZ_LAUX01000142.1 1 1945
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000142.1	RefSeq	region	1	1945	.	+	.	ID=NZ_LAUX01000142.1:1..1945;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000142.1	RefSeq	pseudogene	1	185	.	-	.	ID=gene-MSCD_RS04555;Name=MSCD_RS04555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04555;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000142.1	Protein Homology	CDS	1	185	.	-	0	ID=cds-MSCD_RS04555;Parent=gene-MSCD_RS04555;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387444.1;locus_tag=MSCD_RS04555;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000142.1	RefSeq	gene	254	1141	.	-	.	ID=gene-MSCD_RS04560;Name=MSCD_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04560;old_locus_tag=MSCd_7910
NZ_LAUX01000142.1	Protein Homology	CDS	254	1141	.	-	0	ID=cds-WP_011166593.1;Parent=gene-MSCD_RS04560;Dbxref=GenBank:WP_011166593.1;Name=WP_011166593.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387445.1;locus_tag=MSCD_RS04560;product=ECF transporter S component;protein_id=WP_011166593.1;transl_table=4
NZ_LAUX01000142.1	RefSeq	gene	1290	1850	.	+	.	ID=gene-MSCD_RS04565;Name=MSCD_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04565;old_locus_tag=MSCd_7920
NZ_LAUX01000142.1	Protein Homology	CDS	1290	1850	.	+	0	ID=cds-WP_011166592.1;Parent=gene-MSCD_RS04565;Dbxref=GenBank:WP_011166592.1;Name=WP_011166592.1;Ontology_term=GO:0006796,GO:0000287,GO:0004427,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862682.1;locus_tag=MSCD_RS04565;product=inorganic diphosphatase;protein_id=WP_011166592.1;transl_table=4
##sequence-region NZ_LAUX01000143.1 1 891
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000143.1	RefSeq	region	1	891	.	+	.	ID=NZ_LAUX01000143.1:1..891;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000143.1	RefSeq	gene	1	891	.	-	.	ID=gene-MSCD_RS04570;Name=MSCD_RS04570;end_range=891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04570;partial=true;start_range=.,1
NZ_LAUX01000143.1	Protein Homology	CDS	1	891	.	-	1	ID=cds-WP_308506915.1;Parent=gene-MSCD_RS04570;Dbxref=GenBank:WP_308506915.1;Name=WP_308506915.1;end_range=891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729220.1;locus_tag=MSCD_RS04570;partial=true;product=ComEC/Rec2 family competence protein;protein_id=WP_308506915.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000144.1 1 921
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000144.1	RefSeq	region	1	921	.	+	.	ID=NZ_LAUX01000144.1:1..921;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000144.1	RefSeq	gene	679	837	.	+	.	ID=gene-MSCD_RS04575;Name=MSCD_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04575
NZ_LAUX01000144.1	Protein Homology	CDS	679	837	.	+	0	ID=cds-WP_011166571.1;Parent=gene-MSCD_RS04575;Dbxref=GenBank:WP_011166571.1;Name=WP_011166571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166571.1;locus_tag=MSCD_RS04575;product=hypothetical protein;protein_id=WP_011166571.1;transl_table=4
##sequence-region NZ_LAUX01000145.1 1 1157
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000145.1	RefSeq	region	1	1157	.	+	.	ID=NZ_LAUX01000145.1:1..1157;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000145.1	RefSeq	pseudogene	1	227	.	-	.	ID=gene-MSCD_RS04580;Name=MSCD_RS04580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04580;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000145.1	Protein Homology	CDS	1	227	.	-	0	ID=cds-MSCD_RS04580;Parent=gene-MSCD_RS04580;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729493.1;locus_tag=MSCD_RS04580;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000145.1	RefSeq	pseudogene	245	1157	.	-	.	ID=gene-MSCD_RS04585;Name=MSCD_RS04585;end_range=1157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04585;partial=true;pseudo=true
NZ_LAUX01000145.1	Protein Homology	CDS	245	1157	.	-	1	ID=cds-MSCD_RS04585;Parent=gene-MSCD_RS04585;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862666.1;locus_tag=MSCD_RS04585;partial=true;product=MFS cation transporter;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000146.1 1 689
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000146.1	RefSeq	region	1	689	.	+	.	ID=NZ_LAUX01000146.1:1..689;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000146.1	RefSeq	gene	139	483	.	+	.	ID=gene-MSCD_RS04590;Name=MSCD_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04590;old_locus_tag=MSCd_7940
NZ_LAUX01000146.1	Protein Homology	CDS	139	483	.	+	0	ID=cds-WP_011166581.1;Parent=gene-MSCD_RS04590;Dbxref=GenBank:WP_011166581.1;Name=WP_011166581.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166581.1;locus_tag=MSCD_RS04590;product=lipoprotein;protein_id=WP_011166581.1;transl_table=4
##sequence-region NZ_LAUX01000147.1 1 607
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000147.1	RefSeq	region	1	607	.	+	.	ID=NZ_LAUX01000147.1:1..607;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000147.1	RefSeq	pseudogene	1	247	.	-	.	ID=gene-MSCD_RS05710;Name=MSCD_RS05710;end_range=247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS05710;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000147.1	Protein Homology	CDS	1	247	.	-	0	ID=cds-MSCD_RS05710;Parent=gene-MSCD_RS05710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=247,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954660.1;locus_tag=MSCD_RS05710;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000147.1	RefSeq	gene	236	484	.	+	.	ID=gene-MSCD_RS05800;Name=MSCD_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05800
NZ_LAUX01000147.1	Protein Homology	CDS	236	484	.	+	0	ID=cds-WP_039275552.1;Parent=gene-MSCD_RS05800;Dbxref=GenBank:WP_039275552.1;Name=WP_039275552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=MSCD_RS05800;product=variable surface lipoprotein;protein_id=WP_039275552.1;transl_table=4
NZ_LAUX01000147.1	RefSeq	gene	372	607	.	-	.	ID=gene-MSCD_RS05725;Name=MSCD_RS05725;end_range=607,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05725;partial=true
NZ_LAUX01000147.1	GeneMarkS-2+	CDS	372	607	.	-	2	ID=cds-WP_219896760.1;Parent=gene-MSCD_RS05725;Dbxref=GenBank:WP_219896760.1;Name=WP_219896760.1;end_range=607,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05725;partial=true;product=hypothetical protein;protein_id=WP_219896760.1;transl_table=4
##sequence-region NZ_LAUX01000148.1 1 997
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000148.1	RefSeq	region	1	997	.	+	.	ID=NZ_LAUX01000148.1:1..997;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000148.1	RefSeq	gene	113	841	.	-	.	ID=gene-MSCD_RS04605;Name=MSCD_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04605;old_locus_tag=MSCd_7950
NZ_LAUX01000148.1	Protein Homology	CDS	113	841	.	-	0	ID=cds-WP_011167030.1;Parent=gene-MSCD_RS04605;Dbxref=GenBank:WP_011167030.1;Name=WP_011167030.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167030.1;locus_tag=MSCD_RS04605;product=ROK family protein;protein_id=WP_011167030.1;transl_table=4
##sequence-region NZ_LAUX01000149.1 1 1008
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000149.1	RefSeq	region	1	1008	.	+	.	ID=NZ_LAUX01000149.1:1..1008;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000149.1	RefSeq	gene	1	1008	.	+	.	ID=gene-MSCD_RS04615;Name=MSCD_RS04615;end_range=1008,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04615;partial=true;start_range=.,1
NZ_LAUX01000149.1	Protein Homology	CDS	1	1008	.	+	0	ID=cds-WP_107682141.1;Parent=gene-MSCD_RS04615;Dbxref=GenBank:WP_107682141.1;Name=WP_107682141.1;Ontology_term=GO:0006313,GO:0004803;end_range=1008,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167174.1;locus_tag=MSCD_RS04615;partial=true;product=IS1634-like element ISMmy1 family transposase;protein_id=WP_107682141.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000150.1 1 1407
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000150.1	RefSeq	region	1	1407	.	+	.	ID=NZ_LAUX01000150.1:1..1407;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000150.1	RefSeq	pseudogene	23	1407	.	-	.	ID=gene-MSCD_RS04620;Name=MSCD_RS04620;end_range=1407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04620;partial=true;pseudo=true
NZ_LAUX01000150.1	Protein Homology	CDS	23	1407	.	-	0	ID=cds-MSCD_RS04620;Parent=gene-MSCD_RS04620;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0055085,GO:0015293;end_range=1407,.;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020863057.1;locus_tag=MSCD_RS04620;partial=true;product=hexose phosphate transporter;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000151.1 1 1235
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000151.1	RefSeq	region	1	1235	.	+	.	ID=NZ_LAUX01000151.1:1..1235;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000151.1	RefSeq	gene	1	1123	.	-	.	ID=gene-MSCD_RS04625;Name=MSCD_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04625;partial=true;start_range=.,1
NZ_LAUX01000151.1	Protein Homology	CDS	1	1123	.	-	0	ID=cds-WP_181256872.1;Parent=gene-MSCD_RS04625;Dbxref=GenBank:WP_181256872.1;Name=WP_181256872.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545648.1;locus_tag=MSCD_RS04625;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_181256872.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000152.1 1 1892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000152.1	RefSeq	region	1	1892	.	+	.	ID=NZ_LAUX01000152.1:1..1892;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000152.1	RefSeq	gene	18	1892	.	+	.	ID=gene-MSCD_RS04630;Name=MSCD_RS04630;end_range=1892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04630;partial=true
NZ_LAUX01000152.1	Protein Homology	CDS	18	1892	.	+	0	ID=cds-WP_107682143.1;Parent=gene-MSCD_RS04630;Dbxref=GenBank:WP_107682143.1;Name=WP_107682143.1;Ontology_term=GO:0006508,GO:0008234;end_range=1892,.;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729651.1;locus_tag=MSCD_RS04630;partial=true;product=C1 family peptidase;protein_id=WP_107682143.1;transl_table=4
##sequence-region NZ_LAUX01000153.1 1 898
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000153.1	RefSeq	region	1	898	.	+	.	ID=NZ_LAUX01000153.1:1..898;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000153.1	RefSeq	gene	6	407	.	-	.	ID=gene-MSCD_RS05580;Name=MSCD_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05580;old_locus_tag=MSCd_7960
NZ_LAUX01000153.1	Protein Homology	CDS	6	407	.	-	0	ID=cds-WP_230592191.1;Parent=gene-MSCD_RS05580;Dbxref=GenBank:WP_230592191.1;Name=WP_230592191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=MSCD_RS05580;product=variable surface lipoprotein;protein_id=WP_230592191.1;transl_table=4
NZ_LAUX01000153.1	RefSeq	gene	445	898	.	-	.	ID=gene-MSCD_RS04640;Name=MSCD_RS04640;end_range=898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04640;partial=true
NZ_LAUX01000153.1	Protein Homology	CDS	445	898	.	-	1	ID=cds-WP_015545612.1;Parent=gene-MSCD_RS04640;Dbxref=GenBank:WP_015545612.1;Name=WP_015545612.1;Ontology_term=GO:0005515;end_range=898,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167149.1;locus_tag=MSCD_RS04640;partial=true;product=BspA family leucine-rich repeat surface protein;protein_id=WP_015545612.1;transl_table=4
##sequence-region NZ_LAUX01000154.1 1 573
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000154.1	RefSeq	region	1	573	.	+	.	ID=NZ_LAUX01000154.1:1..573;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000154.1	RefSeq	gene	1	573	.	+	.	ID=gene-MSCD_RS04645;Name=MSCD_RS04645;end_range=573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04645;partial=true;start_range=.,1
NZ_LAUX01000154.1	Protein Homology	CDS	1	573	.	+	0	ID=cds-WP_107682144.1;Parent=gene-MSCD_RS04645;Dbxref=GenBank:WP_107682144.1;Name=WP_107682144.1;Ontology_term=GO:0006284,GO:0004844;end_range=573,.;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697806.1;locus_tag=MSCD_RS04645;partial=true;product=uracil-DNA glycosylase;protein_id=WP_107682144.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000155.1 1 713
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000155.1	RefSeq	region	1	713	.	+	.	ID=NZ_LAUX01000155.1:1..713;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000155.1	RefSeq	pseudogene	1	571	.	+	.	ID=gene-MSCD_RS04650;Name=MSCD_RS04650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04650;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000155.1	Protein Homology	CDS	1	571	.	+	1	ID=cds-MSCD_RS04650;Parent=gene-MSCD_RS04650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166388.1;locus_tag=MSCD_RS04650;partial=true;product=DNA-methyltransferase;pseudo=true;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000156.1 1 820
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000156.1	RefSeq	region	1	820	.	+	.	ID=NZ_LAUX01000156.1:1..820;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000156.1	RefSeq	gene	60	362	.	+	.	ID=gene-MSCD_RS05585;Name=MSCD_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05585
NZ_LAUX01000156.1	GeneMarkS-2+	CDS	60	362	.	+	0	ID=cds-WP_258177048.1;Parent=gene-MSCD_RS05585;Dbxref=GenBank:WP_258177048.1;Name=WP_258177048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05585;product=hypothetical protein;protein_id=WP_258177048.1;transl_table=4
NZ_LAUX01000156.1	RefSeq	gene	295	820	.	+	.	ID=gene-MSCD_RS04655;Name=MSCD_RS04655;end_range=820,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04655;partial=true
NZ_LAUX01000156.1	Protein Homology	CDS	295	820	.	+	0	ID=cds-WP_416371528.1;Parent=gene-MSCD_RS04655;Dbxref=GenBank:WP_416371528.1;Name=WP_416371528.1;end_range=820,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045889.1;locus_tag=MSCD_RS04655;partial=true;product=Mbov_0396 family ICE element transmembrane protein;protein_id=WP_416371528.1;transl_table=4
##sequence-region NZ_LAUX01000157.1 1 1046
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000157.1	RefSeq	region	1	1046	.	+	.	ID=NZ_LAUX01000157.1:1..1046;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000157.1	RefSeq	gene	185	1046	.	+	.	ID=gene-MSCD_RS04660;Name=MSCD_RS04660;end_range=1046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04660;partial=true
NZ_LAUX01000157.1	Protein Homology	CDS	185	1046	.	+	0	ID=cds-WP_146149240.1;Parent=gene-MSCD_RS04660;Dbxref=GenBank:WP_146149240.1;Name=WP_146149240.1;end_range=1046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862625.1;locus_tag=MSCD_RS04660;partial=true;product=STREFT protein;protein_id=WP_146149240.1;transl_table=4
##sequence-region NZ_LAUX01000158.1 1 505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000158.1	RefSeq	region	1	505	.	+	.	ID=NZ_LAUX01000158.1:1..505;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000158.1	RefSeq	gene	53	295	.	+	.	ID=gene-MSCD_RS05805;Name=MSCD_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05805;old_locus_tag=MSCd_7970
NZ_LAUX01000158.1	Protein Homology	CDS	53	295	.	+	0	ID=cds-WP_011167175.1;Parent=gene-MSCD_RS05805;Dbxref=GenBank:WP_011167175.1;Name=WP_011167175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167175.1;locus_tag=MSCD_RS05805;product=lipoprotein;protein_id=WP_011167175.1;transl_table=4
NZ_LAUX01000158.1	RefSeq	gene	210	479	.	+	.	ID=gene-MSCD_RS05810;Name=MSCD_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05810;old_locus_tag=MSCd_7980
NZ_LAUX01000158.1	GeneMarkS-2+	CDS	210	479	.	+	0	ID=cds-WP_107326366.1;Parent=gene-MSCD_RS05810;Dbxref=GenBank:WP_107326366.1;Name=WP_107326366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05810;product=hypothetical protein;protein_id=WP_107326366.1;transl_table=4
##sequence-region NZ_LAUX01000159.1 1 1999
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000159.1	RefSeq	region	1	1999	.	+	.	ID=NZ_LAUX01000159.1:1..1999;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000159.1	RefSeq	gene	11	99	.	+	.	ID=gene-MSCD_RS04675;Name=MSCD_RS04675;gbkey=Gene;gene_biotype=tRNA;locus_tag=MSCD_RS04675;old_locus_tag=MSCd_7990
NZ_LAUX01000159.1	tRNAscan-SE	tRNA	11	99	.	+	.	ID=rna-MSCD_RS04675;Parent=gene-MSCD_RS04675;anticodon=(pos:45..47);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04675;product=tRNA-Leu
NZ_LAUX01000159.1	tRNAscan-SE	exon	11	99	.	+	.	ID=exon-MSCD_RS04675-1;Parent=rna-MSCD_RS04675;anticodon=(pos:45..47);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=MSCD_RS04675;product=tRNA-Leu
NZ_LAUX01000159.1	RefSeq	gene	198	1223	.	-	.	ID=gene-MSCD_RS04680;Name=MSCD_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04680;old_locus_tag=MSCd_8000
NZ_LAUX01000159.1	Protein Homology	CDS	198	1223	.	-	0	ID=cds-WP_011166753.1;Parent=gene-MSCD_RS04680;Dbxref=GenBank:WP_011166753.1;Name=WP_011166753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166753.1;locus_tag=MSCD_RS04680;product=hypothetical protein;protein_id=WP_011166753.1;transl_table=4
NZ_LAUX01000159.1	RefSeq	gene	1569	1841	.	-	.	ID=gene-MSCD_RS04985;Name=MSCD_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04985;old_locus_tag=MSCd_8010
NZ_LAUX01000159.1	GeneMarkS-2+	CDS	1569	1841	.	-	0	ID=cds-WP_015545565.1;Parent=gene-MSCD_RS04985;Dbxref=GenBank:WP_015545565.1;Name=WP_015545565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS04985;product=hypothetical protein;protein_id=WP_015545565.1;transl_table=4
##sequence-region NZ_LAUX01000160.1 1 990
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000160.1	RefSeq	region	1	990	.	+	.	ID=NZ_LAUX01000160.1:1..990;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000160.1	RefSeq	gene	32	214	.	-	.	ID=gene-MSCD_RS04690;Name=MSCD_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04690
NZ_LAUX01000160.1	Protein Homology	CDS	32	214	.	-	0	ID=cds-WP_039275530.1;Parent=gene-MSCD_RS04690;Dbxref=GenBank:WP_039275530.1;Name=WP_039275530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166268.1;locus_tag=MSCD_RS04690;product=hypothetical protein;protein_id=WP_039275530.1;transl_table=4
NZ_LAUX01000160.1	RefSeq	gene	398	634	.	-	.	ID=gene-MSCD_RS04695;Name=MSCD_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04695;old_locus_tag=MSCd_8030
NZ_LAUX01000160.1	GeneMarkS-2+	CDS	398	634	.	-	0	ID=cds-WP_162465381.1;Parent=gene-MSCD_RS04695;Dbxref=GenBank:WP_162465381.1;Name=WP_162465381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS04695;product=hypothetical protein;protein_id=WP_162465381.1;transl_table=4
##sequence-region NZ_LAUX01000161.1 1 659
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000161.1	RefSeq	region	1	659	.	+	.	ID=NZ_LAUX01000161.1:1..659;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000161.1	RefSeq	pseudogene	89	659	.	-	.	ID=gene-MSCD_RS04705;Name=MSCD_RS04705;end_range=659,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04705;partial=true;pseudo=true
NZ_LAUX01000161.1	Protein Homology	CDS	89	659	.	-	1	ID=cds-MSCD_RS04705;Parent=gene-MSCD_RS04705;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166841.1;locus_tag=MSCD_RS04705;partial=true;product=hypothetical protein;pseudo=true;transl_table=4
##sequence-region NZ_LAUX01000162.1 1 1859
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000162.1	RefSeq	region	1	1859	.	+	.	ID=NZ_LAUX01000162.1:1..1859;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000162.1	RefSeq	pseudogene	1	96	.	+	.	ID=gene-MSCD_RS04710;Name=MSCD_RS04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04710;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000162.1	Protein Homology	CDS	1	96	.	+	0	ID=cds-MSCD_RS04710;Parent=gene-MSCD_RS04710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035082.1;locus_tag=MSCD_RS04710;partial=true;product=single-stranded DNA-binding protein;pseudo=true;start_range=.,1;transl_table=4
NZ_LAUX01000162.1	RefSeq	gene	218	670	.	+	.	ID=gene-MSCD_RS05595;Name=MSCD_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05595;old_locus_tag=MSCd_8050
NZ_LAUX01000162.1	GeneMarkS-2+	CDS	218	670	.	+	0	ID=cds-WP_258176827.1;Parent=gene-MSCD_RS05595;Dbxref=GenBank:WP_258176827.1;Name=WP_258176827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05595;product=hypothetical protein;protein_id=WP_258176827.1;transl_table=4
NZ_LAUX01000162.1	RefSeq	gene	807	1388	.	+	.	ID=gene-MSCD_RS04720;Name=MSCD_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04720;old_locus_tag=MSCd_8060
NZ_LAUX01000162.1	Protein Homology	CDS	807	1388	.	+	0	ID=cds-WP_015545665.1;Parent=gene-MSCD_RS04720;Dbxref=GenBank:WP_015545665.1;Name=WP_015545665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545665.1;locus_tag=MSCD_RS04720;product=hypothetical protein;protein_id=WP_015545665.1;transl_table=4
NZ_LAUX01000162.1	RefSeq	gene	1375	1719	.	+	.	ID=gene-MSCD_RS04725;Name=MSCD_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04725;old_locus_tag=MSCd_8070
NZ_LAUX01000162.1	Protein Homology	CDS	1375	1719	.	+	0	ID=cds-WP_015545593.1;Parent=gene-MSCD_RS04725;Dbxref=GenBank:WP_015545593.1;Name=WP_015545593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545593.1;locus_tag=MSCD_RS04725;product=Mbov_0395 family pilin-like conjugal transfer protein;protein_id=WP_015545593.1;transl_table=4
##sequence-region NZ_LAUX01000163.1 1 1309
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000163.1	RefSeq	region	1	1309	.	+	.	ID=NZ_LAUX01000163.1:1..1309;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000163.1	RefSeq	pseudogene	1	1309	.	-	.	ID=gene-MSCD_RS04730;Name=MSCD_RS04730;end_range=1309,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04730;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000163.1	Protein Homology	CDS	1	1309	.	-	1	ID=cds-MSCD_RS04730;Parent=gene-MSCD_RS04730;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0009101,GO:0016757;end_range=1309,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545435.1;locus_tag=MSCD_RS04730;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000164.1 1 848
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000164.1	RefSeq	region	1	848	.	+	.	ID=NZ_LAUX01000164.1:1..848;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000164.1	RefSeq	gene	1	810	.	-	.	ID=gene-MSCD_RS04740;Name=MSCD_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04740;partial=true;start_range=.,1
NZ_LAUX01000164.1	Protein Homology	CDS	1	810	.	-	0	ID=cds-WP_107682146.1;Parent=gene-MSCD_RS04740;Dbxref=GenBank:WP_107682146.1;Name=WP_107682146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017697756.1;locus_tag=MSCD_RS04740;partial=true;product=Mbov_0396 family ICE element transmembrane protein;protein_id=WP_107682146.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000165.1 1 719
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000165.1	RefSeq	region	1	719	.	+	.	ID=NZ_LAUX01000165.1:1..719;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000165.1	RefSeq	gene	1	719	.	-	.	ID=gene-MSCD_RS04745;Name=MSCD_RS04745;end_range=719,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04745;partial=true;start_range=.,1
NZ_LAUX01000165.1	Protein Homology	CDS	1	719	.	-	0	ID=cds-WP_258177049.1;Parent=gene-MSCD_RS04745;Dbxref=GenBank:WP_258177049.1;Name=WP_258177049.1;end_range=719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011167134.1;locus_tag=MSCD_RS04745;partial=true;product=glycosyl transferase;protein_id=WP_258177049.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000166.1 1 1105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000166.1	RefSeq	region	1	1105	.	+	.	ID=NZ_LAUX01000166.1:1..1105;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000166.1	RefSeq	gene	1	1105	.	-	.	ID=gene-MSCD_RS04750;Name=MSCD_RS04750;end_range=1105,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04750;partial=true;start_range=.,1
NZ_LAUX01000166.1	Protein Homology	CDS	1	1105	.	-	1	ID=cds-WP_181256873.1;Parent=gene-MSCD_RS04750;Dbxref=GenBank:WP_181256873.1;Name=WP_181256873.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;end_range=1105,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447480.1;locus_tag=MSCD_RS04750;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_181256873.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000167.1 1 1464
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000167.1	RefSeq	region	1	1464	.	+	.	ID=NZ_LAUX01000167.1:1..1464;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000167.1	RefSeq	pseudogene	1	1286	.	-	.	ID=gene-MSCD_RS04755;Name=MSCD_RS04755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=MSCD_RS04755;partial=true;pseudo=true;start_range=.,1
NZ_LAUX01000167.1	Protein Homology	CDS	1	1286	.	-	0	ID=cds-MSCD_RS04755;Parent=gene-MSCD_RS04755;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013729261.1;locus_tag=MSCD_RS04755;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000168.1 1 1111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000168.1	RefSeq	region	1	1111	.	+	.	ID=NZ_LAUX01000168.1:1..1111;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000168.1	RefSeq	gene	55	948	.	-	.	ID=gene-MSCD_RS04760;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=MSCD_RS04760;old_locus_tag=MSCd_8090
NZ_LAUX01000168.1	Protein Homology	CDS	55	948	.	-	0	ID=cds-WP_011166343.1;Parent=gene-MSCD_RS04760;Dbxref=GenBank:WP_011166343.1;Name=WP_011166343.1;Ontology_term=GO:0006096,GO:0030388,GO:0004332,GO:0008270;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=glycolytic process|0006096||IEA,fructose 1%2C6-bisphosphate metabolic process|0030388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362366.1;locus_tag=MSCD_RS04760;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=WP_011166343.1;transl_table=4
##sequence-region NZ_LAUX01000169.1 1 550
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000169.1	RefSeq	region	1	550	.	+	.	ID=NZ_LAUX01000169.1:1..550;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000169.1	RefSeq	gene	1	173	.	-	.	ID=gene-MSCD_RS04765;Name=MSCD_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04765;partial=true;start_range=.,1
NZ_LAUX01000169.1	Protein Homology	CDS	1	173	.	-	0	ID=cds-WP_146149241.1;Parent=gene-MSCD_RS04765;Dbxref=GenBank:WP_146149241.1;Name=WP_146149241.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=MSCD_RS04765;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_146149241.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000170.1 1 531
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000170.1	RefSeq	region	1	531	.	+	.	ID=NZ_LAUX01000170.1:1..531;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000170.1	RefSeq	gene	1	379	.	+	.	ID=gene-MSCD_RS04770;Name=MSCD_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04770;partial=true;start_range=.,1
NZ_LAUX01000170.1	Protein Homology	CDS	1	379	.	+	1	ID=cds-WP_258177050.1;Parent=gene-MSCD_RS04770;Dbxref=GenBank:WP_258177050.1;Name=WP_258177050.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF014832.7;locus_tag=MSCD_RS04770;partial=true;product=E3 binding domain-containing protein;protein_id=WP_258177050.1;start_range=.,1;transl_table=4
##sequence-region NZ_LAUX01000171.1 1 1575
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1188258
NZ_LAUX01000171.1	RefSeq	region	1	1575	.	+	.	ID=NZ_LAUX01000171.1:1..1575;Dbxref=taxon:1188258;collection-date=1948;country=Sudan;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=cattle;strain=KH3J
NZ_LAUX01000171.1	RefSeq	gene	1	488	.	+	.	ID=gene-MSCD_RS05605;Name=MSCD_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS05605;partial=true;start_range=.,1
NZ_LAUX01000171.1	GeneMarkS-2+	CDS	1	488	.	+	2	ID=cds-WP_258177051.1;Parent=gene-MSCD_RS05605;Dbxref=GenBank:WP_258177051.1;Name=WP_258177051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS05605;partial=true;product=hypothetical protein;protein_id=WP_258177051.1;start_range=.,1;transl_table=4
NZ_LAUX01000171.1	RefSeq	gene	607	762	.	-	.	ID=gene-MSCD_RS04990;Name=MSCD_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04990
NZ_LAUX01000171.1	GeneMarkS-2+	CDS	607	762	.	-	0	ID=cds-WP_015545605.1;Parent=gene-MSCD_RS04990;Dbxref=GenBank:WP_015545605.1;Name=WP_015545605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=MSCD_RS04990;product=transposase;protein_id=WP_015545605.1;transl_table=4
NZ_LAUX01000171.1	RefSeq	gene	1184	1575	.	-	.	ID=gene-MSCD_RS04780;Name=MSCD_RS04780;end_range=1575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=MSCD_RS04780;partial=true
NZ_LAUX01000171.1	Protein Homology	CDS	1184	1575	.	-	2	ID=cds-WP_146146936.1;Parent=gene-MSCD_RS04780;Dbxref=GenBank:WP_146146936.1;Name=WP_146146936.1;end_range=1575,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.7;locus_tag=MSCD_RS04780;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_146146936.1;transl_table=4
###