##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3184661v1 #!genome-build-accession NCBI_Assembly:GCF_031846615.1 #!annotation-date 09/26/2026 01:22:17 #!annotation-source NCBI RefSeq GCF_031846615.1-RS_2026_09_26 ##sequence-region NZ_JAVRJX010000010.1 1 23888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000010.1 RefSeq region 1 23888 . + . ID=NZ_JAVRJX010000010.1:1..23888;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000010.1 RefSeq pseudogene 1 1067 . - . ID=gene-RM610_RS11740;Name=RM610_RS11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11740;old_locus_tag=RM610_11775;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJX010000010.1 GeneMarkS-2+ CDS 1 1067 . - 0 ID=cds-RM610_RS11740;Parent=gene-RM610_RS11740;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 1042 1389 . + . ID=gene-RM610_RS11745;Name=RM610_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11745;old_locus_tag=RM610_11780 NZ_JAVRJX010000010.1 Protein Homology CDS 1042 1389 . + 0 ID=cds-WP_311542372.1;Parent=gene-RM610_RS11745;Dbxref=GenBank:WP_311542372.1;Name=WP_311542372.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM610_RS11745;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_311542372.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 1500 2723 . + . ID=gene-RM610_RS11750;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=RM610_RS11750;old_locus_tag=RM610_11785 NZ_JAVRJX010000010.1 Protein Homology CDS 1500 2723 . + 0 ID=cds-WP_107389573.1;Parent=gene-RM610_RS11750;Dbxref=GenBank:WP_107389573.1;Name=WP_107389573.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167352.1;locus_tag=RM610_RS11750;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_107389573.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 2735 4291 . + . ID=gene-RM610_RS11755;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=RM610_RS11755;old_locus_tag=RM610_11790 NZ_JAVRJX010000010.1 Protein Homology CDS 2735 4291 . + 0 ID=cds-WP_311542373.1;Parent=gene-RM610_RS11755;Dbxref=GenBank:WP_311542373.1;Name=WP_311542373.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425978.1;locus_tag=RM610_RS11755;product=accessory Sec system protein Asp1;protein_id=WP_311542373.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 4281 5840 . + . ID=gene-RM610_RS11760;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=RM610_RS11760;old_locus_tag=RM610_11795 NZ_JAVRJX010000010.1 Protein Homology CDS 4281 5840 . + 0 ID=cds-WP_311542374.1;Parent=gene-RM610_RS11760;Dbxref=GenBank:WP_311542374.1;Name=WP_311542374.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137453.1;locus_tag=RM610_RS11760;product=accessory Sec system protein Asp2;protein_id=WP_311542374.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 5830 6741 . + . ID=gene-RM610_RS11765;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=RM610_RS11765;old_locus_tag=RM610_11800 NZ_JAVRJX010000010.1 Protein Homology CDS 5830 6741 . + 0 ID=cds-WP_311542375.1;Parent=gene-RM610_RS11765;Dbxref=GenBank:WP_311542375.1;Name=WP_311542375.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: protein motif:HMM:TIGR03711.1;locus_tag=RM610_RS11765;product=accessory Sec system protein Asp3;protein_id=WP_311542375.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 6731 9121 . + . ID=gene-RM610_RS11770;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=RM610_RS11770;old_locus_tag=RM610_11805 NZ_JAVRJX010000010.1 Protein Homology CDS 6731 9121 . + 0 ID=cds-WP_311542376.1;Parent=gene-RM610_RS11770;Dbxref=GenBank:WP_311542376.1;Name=WP_311542376.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=RM610_RS11770;product=accessory Sec system translocase SecA2;protein_id=WP_311542376.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 9137 10642 . + . ID=gene-RM610_RS11775;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=RM610_RS11775;old_locus_tag=RM610_11810 NZ_JAVRJX010000010.1 Protein Homology CDS 9137 10642 . + 0 ID=cds-WP_311542377.1;Parent=gene-RM610_RS11775;Dbxref=GenBank:WP_311542377.1;Name=WP_311542377.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804521.1;locus_tag=RM610_RS11775;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_311542377.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 10635 11975 . + . ID=gene-RM610_RS11780;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=RM610_RS11780;old_locus_tag=RM610_11815 NZ_JAVRJX010000010.1 Protein Homology CDS 10635 11975 . + 0 ID=cds-WP_311542378.1;Parent=gene-RM610_RS11780;Dbxref=GenBank:WP_311542378.1;Name=WP_311542378.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=RM610_RS11780;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_311542378.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 12164 13054 . + . ID=gene-RM610_RS11785;Name=RM610_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11785;old_locus_tag=RM610_11820 NZ_JAVRJX010000010.1 Protein Homology CDS 12164 13054 . + 0 ID=cds-WP_311542379.1;Parent=gene-RM610_RS11785;Dbxref=GenBank:WP_311542379.1;Name=WP_311542379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020062552.1;locus_tag=RM610_RS11785;product=PhzF family protein;protein_id=WP_311542379.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 13205 14407 . - . ID=gene-RM610_RS11790;Name=RM610_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11790;old_locus_tag=RM610_11825 NZ_JAVRJX010000010.1 Protein Homology CDS 13205 14407 . - 0 ID=cds-WP_311542380.1;Parent=gene-RM610_RS11790;Dbxref=GenBank:WP_311542380.1;Name=WP_311542380.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498792.1;locus_tag=RM610_RS11790;product=thiolase family protein;protein_id=WP_311542380.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 14429 16690 . - . ID=gene-RM610_RS11795;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=RM610_RS11795;old_locus_tag=RM610_11830 NZ_JAVRJX010000010.1 Protein Homology CDS 14429 16690 . - 0 ID=cds-WP_311542381.1;Parent=gene-RM610_RS11795;Dbxref=GenBank:WP_311542381.1;Name=WP_311542381.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572804.1;locus_tag=RM610_RS11795;product=3-hydroxyacyl-CoA dehydrogenase/crotonase FadB;protein_id=WP_311542381.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 16717 17925 . - . ID=gene-RM610_RS11800;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=RM610_RS11800;old_locus_tag=RM610_11835 NZ_JAVRJX010000010.1 Protein Homology CDS 16717 17925 . - 0 ID=cds-WP_107375827.1;Parent=gene-RM610_RS11800;Dbxref=GenBank:WP_107375827.1;Name=WP_107375827.1;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000995.1;locus_tag=RM610_RS11800;product=acyl-CoA dehydrogenase FadE;protein_id=WP_107375827.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 17978 19489 . - . ID=gene-RM610_RS11805;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=RM610_RS11805;old_locus_tag=RM610_11840 NZ_JAVRJX010000010.1 Protein Homology CDS 17978 19489 . - 0 ID=cds-WP_107375828.1;Parent=gene-RM610_RS11805;Dbxref=GenBank:WP_107375828.1;Name=WP_107375828.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498795.1;locus_tag=RM610_RS11805;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_107375828.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 19610 21193 . - . ID=gene-RM610_RS11810;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=RM610_RS11810;old_locus_tag=RM610_11845 NZ_JAVRJX010000010.1 Protein Homology CDS 19610 21193 . - 0 ID=cds-WP_107380951.1;Parent=gene-RM610_RS11810;Dbxref=GenBank:WP_107380951.1;Name=WP_107380951.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000993.1;locus_tag=RM610_RS11810;product=fatty acid degradation protein FadX;protein_id=WP_107380951.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 21409 22458 . + . ID=gene-RM610_RS11815;Name=RM610_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11815;old_locus_tag=RM610_11850 NZ_JAVRJX010000010.1 Protein Homology CDS 21409 22458 . + 0 ID=cds-WP_107380952.1;Parent=gene-RM610_RS11815;Dbxref=GenBank:WP_107380952.1;Name=WP_107380952.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=RM610_RS11815;product=ABC transporter permease;protein_id=WP_107380952.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 22471 23133 . + . ID=gene-RM610_RS11820;Name=RM610_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11820;old_locus_tag=RM610_11855 NZ_JAVRJX010000010.1 Protein Homology CDS 22471 23133 . + 0 ID=cds-WP_311542382.1;Parent=gene-RM610_RS11820;Dbxref=GenBank:WP_311542382.1;Name=WP_311542382.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274491.1;locus_tag=RM610_RS11820;product=ABC transporter ATP-binding protein;protein_id=WP_311542382.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 23146 23337 . + . ID=gene-RM610_RS11825;Name=RM610_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11825;old_locus_tag=RM610_11860 NZ_JAVRJX010000010.1 Protein Homology CDS 23146 23337 . + 0 ID=cds-WP_311542383.1;Parent=gene-RM610_RS11825;Dbxref=GenBank:WP_311542383.1;Name=WP_311542383.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.7;locus_tag=RM610_RS11825;product=AAA family ATPase;protein_id=WP_311542383.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq gene 23288 23569 . + . ID=gene-RM610_RS11830;Name=RM610_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11830;old_locus_tag=RM610_11865 NZ_JAVRJX010000010.1 GeneMarkS-2+ CDS 23288 23569 . + 0 ID=cds-WP_311542384.1;Parent=gene-RM610_RS11830;Dbxref=GenBank:WP_311542384.1;Name=WP_311542384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11830;product=P-loop NTPase family protein;protein_id=WP_311542384.1;transl_table=11 NZ_JAVRJX010000010.1 RefSeq pseudogene 23545 23649 . - . ID=gene-RM610_RS11835;Name=RM610_RS11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11835;old_locus_tag=RM610_11870;partial=true;pseudo=true;start_range=.,23545 NZ_JAVRJX010000010.1 Protein Homology CDS 23545 23649 . - 0 ID=cds-RM610_RS11835;Parent=gene-RM610_RS11835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM610_RS11835;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,23545;transl_table=11 ##sequence-region NZ_JAVRJX010000011.1 1 21876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000011.1 RefSeq region 1 21876 . + . ID=NZ_JAVRJX010000011.1:1..21876;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000011.1 RefSeq gene 322 996 . + . ID=gene-RM610_RS11840;Name=RM610_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11840;old_locus_tag=RM610_11875 NZ_JAVRJX010000011.1 Protein Homology CDS 322 996 . + 0 ID=cds-WP_002512555.1;Parent=gene-RM610_RS11840;Dbxref=GenBank:WP_002512555.1;Name=WP_002512555.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM610_RS11840;product=IS6 family transposase;protein_id=WP_002512555.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq pseudogene 1049 1639 . + . ID=gene-RM610_RS11845;Name=RM610_RS11845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11845;old_locus_tag=RM610_11880;partial=true;pseudo=true;start_range=.,1049 NZ_JAVRJX010000011.1 Protein Homology CDS 1049 1639 . + 0 ID=cds-RM610_RS11845;Parent=gene-RM610_RS11845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829696.1;locus_tag=RM610_RS11845;partial=true;product=protein rep;pseudo=true;start_range=.,1049;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 1808 2569 . + . ID=gene-RM610_RS11850;Name=aadD1;gbkey=Gene;gene=aadD1;gene_biotype=protein_coding;locus_tag=RM610_RS11850;old_locus_tag=RM610_11885 NZ_JAVRJX010000011.1 Protein Homology CDS 1808 2569 . + 0 ID=cds-WP_001014230.1;Parent=gene-RM610_RS11850;Dbxref=GenBank:WP_001014230.1;Name=WP_001014230.1;Ontology_term=GO:0046677;gbkey=CDS;gene=aadD1;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032542910.1;locus_tag=RM610_RS11850;product=aminoglycoside O-nucleotidyltransferase ANT(4')-Ia;protein_id=WP_001014230.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 2780 2842 . + . ID=gene-RM610_RS12095;Name=RM610_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12095 NZ_JAVRJX010000011.1 Protein Homology CDS 2780 2842 . + 0 ID=cds-WP_012779615.1;Parent=gene-RM610_RS12095;Dbxref=GenBank:WP_012779615.1;Name=WP_012779615.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_167840811.1;locus_tag=RM610_RS12095;product=tetracycline resistance efflux system leader peptide;protein_id=WP_012779615.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 2876 4252 . + . ID=gene-RM610_RS11855;Name=tet(L);gbkey=Gene;gene=tet(L);gene_biotype=protein_coding;locus_tag=RM610_RS11855;old_locus_tag=RM610_11890 NZ_JAVRJX010000011.1 Protein Homology CDS 2876 4252 . + 0 ID=cds-WP_001574277.1;Parent=gene-RM610_RS11855;Dbxref=GenBank:WP_001574277.1;Name=WP_001574277.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(L);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574277.1;locus_tag=RM610_RS11855;product=tetracycline efflux MFS transporter Tet(L);protein_id=WP_001574277.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 4535 5026 . + . ID=gene-RM610_RS11860;Name=RM610_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11860;old_locus_tag=RM610_11895 NZ_JAVRJX010000011.1 Protein Homology CDS 4535 5026 . + 0 ID=cds-WP_012779617.1;Parent=gene-RM610_RS11860;Dbxref=GenBank:WP_012779617.1;Name=WP_012779617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016204971.1;locus_tag=RM610_RS11860;product=trimethoprim-resistant dihydrofolate reductase DfrK;protein_id=WP_012779617.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 5159 5344 . + . ID=gene-RM610_RS11865;Name=RM610_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11865;old_locus_tag=RM610_11900 NZ_JAVRJX010000011.1 GeneMarkS-2+ CDS 5159 5344 . + 0 ID=cds-WP_031794977.1;Parent=gene-RM610_RS11865;Dbxref=GenBank:WP_031794977.1;Name=WP_031794977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11865;product=hypothetical protein;protein_id=WP_031794977.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 5477 5830 . + . ID=gene-RM610_RS11870;Name=RM610_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11870;old_locus_tag=RM610_11905 NZ_JAVRJX010000011.1 Protein Homology CDS 5477 5830 . + 0 ID=cds-WP_031794976.1;Parent=gene-RM610_RS11870;Dbxref=GenBank:WP_031794976.1;Name=WP_031794976.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015758.7;locus_tag=RM610_RS11870;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_031794976.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 6507 7241 . - . ID=gene-RM610_RS11875;Name=RM610_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11875;old_locus_tag=RM610_11910 NZ_JAVRJX010000011.1 Protein Homology CDS 6507 7241 . - 0 ID=cds-WP_002345002.1;Parent=gene-RM610_RS11875;Dbxref=GenBank:WP_002345002.1;Name=WP_002345002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011282421.1;locus_tag=RM610_RS11875;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T);protein_id=WP_002345002.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 7662 8864 . + . ID=gene-RM610_RS11880;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM610_RS11880;old_locus_tag=RM610_11915 NZ_JAVRJX010000011.1 Protein Homology CDS 7662 8864 . + 0 ID=cds-WP_311542386.1;Parent=gene-RM610_RS11880;Dbxref=GenBank:WP_311542386.1;Name=WP_311542386.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF013258.7;locus_tag=RM610_RS11880;product=MobV family relaxase;protein_id=WP_311542386.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 8895 9569 . + . ID=gene-RM610_RS11885;Name=RM610_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11885;old_locus_tag=RM610_11920 NZ_JAVRJX010000011.1 Protein Homology CDS 8895 9569 . + 0 ID=cds-WP_002512555.1-2;Parent=gene-RM610_RS11885;Dbxref=GenBank:WP_002512555.1;Name=WP_002512555.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM610_RS11885;product=IS6 family transposase;protein_id=WP_002512555.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 9694 11205 . + . ID=gene-RM610_RS11890;Name=RM610_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11890;old_locus_tag=RM610_11925 NZ_JAVRJX010000011.1 Protein Homology CDS 9694 11205 . + 0 ID=cds-WP_037577273.1;Parent=gene-RM610_RS11890;Dbxref=GenBank:WP_037577273.1;Name=WP_037577273.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=RM610_RS11890;product=glycosyltransferase;protein_id=WP_037577273.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 11493 12101 . - . ID=gene-RM610_RS11895;Name=RM610_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11895;old_locus_tag=RM610_11930 NZ_JAVRJX010000011.1 Protein Homology CDS 11493 12101 . - 0 ID=cds-WP_037577271.1;Parent=gene-RM610_RS11895;Dbxref=GenBank:WP_037577271.1;Name=WP_037577271.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436987.1;locus_tag=RM610_RS11895;product=recombinase family protein;protein_id=WP_037577271.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 12499 14118 . + . ID=gene-RM610_RS11900;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=RM610_RS11900;old_locus_tag=RM610_11935 NZ_JAVRJX010000011.1 Protein Homology CDS 12499 14118 . + 0 ID=cds-WP_031797804.1;Parent=gene-RM610_RS11900;Dbxref=GenBank:WP_031797804.1;Name=WP_031797804.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729493.1;locus_tag=RM610_RS11900;product=ribosomal protection-like ABC-F family protein;protein_id=WP_031797804.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 14284 14379 . - . ID=gene-RM610_RS11905;Name=RM610_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11905;old_locus_tag=RM610_11940 NZ_JAVRJX010000011.1 Protein Homology CDS 14284 14379 . - 0 ID=cds-WP_000889979.1;Parent=gene-RM610_RS11905;Dbxref=GenBank:WP_000889979.1;Name=WP_000889979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=RM610_RS11905;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_000889979.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 17057 17254 . + . ID=gene-RM610_RS11910;Name=RM610_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11910;old_locus_tag=RM610_11945 NZ_JAVRJX010000011.1 Protein Homology CDS 17057 17254 . + 0 ID=cds-WP_031797806.1;Parent=gene-RM610_RS11910;Dbxref=GenBank:WP_031797806.1;Name=WP_031797806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174778.1;locus_tag=RM610_RS11910;product=hypothetical protein;protein_id=WP_031797806.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 17282 17626 . + . ID=gene-RM610_RS11915;Name=RM610_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11915;old_locus_tag=RM610_11950 NZ_JAVRJX010000011.1 Protein Homology CDS 17282 17626 . + 0 ID=cds-WP_031797807.1;Parent=gene-RM610_RS11915;Dbxref=GenBank:WP_031797807.1;Name=WP_031797807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832602.1;locus_tag=RM610_RS11915;product=DUF4260 domain-containing protein;protein_id=WP_031797807.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 17840 18088 . + . ID=gene-RM610_RS11920;Name=RM610_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11920;old_locus_tag=RM610_11955 NZ_JAVRJX010000011.1 GeneMarkS-2+ CDS 17840 18088 . + 0 ID=cds-WP_031797809.1;Parent=gene-RM610_RS11920;Dbxref=GenBank:WP_031797809.1;Name=WP_031797809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11920;product=hypothetical protein;protein_id=WP_031797809.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq pseudogene 18329 18514 . + . ID=gene-RM610_RS11925;Name=RM610_RS11925;end_range=18514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11925;old_locus_tag=RM610_11960;partial=true;pseudo=true NZ_JAVRJX010000011.1 Protein Homology CDS 18329 18514 . + 0 ID=cds-RM610_RS11925;Parent=gene-RM610_RS11925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368559.1;locus_tag=RM610_RS11925;partial=true;product=protein rep;pseudo=true;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 18585 19328 . - . ID=gene-RM610_RS11930;Name=RM610_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11930;old_locus_tag=RM610_11965 NZ_JAVRJX010000011.1 Protein Homology CDS 18585 19328 . - 0 ID=cds-WP_031794970.1;Parent=gene-RM610_RS11930;Dbxref=GenBank:WP_031794970.1;Name=WP_031794970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484560.1;locus_tag=RM610_RS11930;product=DUF536 domain-containing protein;protein_id=WP_031794970.1;transl_table=11 NZ_JAVRJX010000011.1 RefSeq gene 19769 20743 . + . ID=gene-RM610_RS11935;Name=RM610_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11935;old_locus_tag=RM610_11970 NZ_JAVRJX010000011.1 Protein Homology CDS 19769 20743 . + 0 ID=cds-WP_084276108.1;Parent=gene-RM610_RS11935;Dbxref=GenBank:WP_084276108.1;Name=WP_084276108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502001.1;locus_tag=RM610_RS11935;product=replication initiator protein A;protein_id=WP_084276108.1;transl_table=11 ##sequence-region NZ_JAVRJX010000012.1 1 6137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000012.1 RefSeq region 1 6137 . + . ID=NZ_JAVRJX010000012.1:1..6137;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000012.1 RefSeq pseudogene 1 6137 . - . ID=gene-RM610_RS11940;Name=RM610_RS11940;end_range=6137,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11940;old_locus_tag=RM610_11975;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJX010000012.1 GeneMarkS-2+ CDS 1 6137 . - 0 ID=cds-RM610_RS11940;Parent=gene-RM610_RS11940;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=6137,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11940;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJX010000013.1 1 3949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000013.1 RefSeq region 1 3949 . + . ID=NZ_JAVRJX010000013.1:1..3949;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000013.1 RefSeq gene 191 1432 . - . ID=gene-RM610_RS11945;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM610_RS11945;old_locus_tag=RM610_11980 NZ_JAVRJX010000013.1 Protein Homology CDS 191 1432 . - 0 ID=cds-WP_046463274.1;Parent=gene-RM610_RS11945;Dbxref=GenBank:WP_046463274.1;Name=WP_046463274.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010889940.1;locus_tag=RM610_RS11945;product=MobV family relaxase;protein_id=WP_046463274.1;transl_table=11 NZ_JAVRJX010000013.1 RefSeq gene 1747 2508 . - . ID=gene-RM610_RS11950;Name=ant(9);gbkey=Gene;gene=ant(9);gene_biotype=protein_coding;locus_tag=RM610_RS11950;old_locus_tag=RM610_11985 NZ_JAVRJX010000013.1 Protein Homology CDS 1747 2508 . - 0 ID=cds-WP_208182380.1;Parent=gene-RM610_RS11950;Dbxref=GenBank:WP_208182380.1;Name=WP_208182380.1;gbkey=CDS;gene=ant(9);inference=COORDINATES: similar to AA sequence:RefSeq:WP_021285909.1;locus_tag=RM610_RS11950;product=aminoglycoside nucleotidyltransferase ANT(9);protein_id=WP_208182380.1;transl_table=11 NZ_JAVRJX010000013.1 RefSeq gene 2534 3478 . - . ID=gene-RM610_RS11955;Name=RM610_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11955;old_locus_tag=RM610_11990 NZ_JAVRJX010000013.1 Protein Homology CDS 2534 3478 . - 0 ID=cds-WP_311542388.1;Parent=gene-RM610_RS11955;Dbxref=GenBank:WP_311542388.1;Name=WP_311542388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277654.1;locus_tag=RM610_RS11955;product=replication initiation factor domain-containing protein;protein_id=WP_311542388.1;transl_table=11 NZ_JAVRJX010000013.1 RefSeq gene 3697 3876 . - . ID=gene-RM610_RS11960;Name=RM610_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11960;old_locus_tag=RM610_11995 NZ_JAVRJX010000013.1 GeneMarkS-2+ CDS 3697 3876 . - 0 ID=cds-WP_000042035.1;Parent=gene-RM610_RS11960;Dbxref=GenBank:WP_000042035.1;Name=WP_000042035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11960;product=hypothetical protein;protein_id=WP_000042035.1;transl_table=11 ##sequence-region NZ_JAVRJX010000014.1 1 1290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000014.1 RefSeq region 1 1290 . + . ID=NZ_JAVRJX010000014.1:1..1290;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000014.1 RefSeq gene 1 1268 . - . ID=gene-RM610_RS11965;Name=RM610_RS11965;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM610_RS11965;old_locus_tag=RM610_12000;partial=true;start_range=.,1 NZ_JAVRJX010000014.1 cmsearch rRNA 1 1268 . - . ID=rna-RM610_RS11965;Parent=gene-RM610_RS11965;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS11965;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVRJX010000014.1 cmsearch exon 1 1268 . - . ID=exon-RM610_RS11965-1;Parent=rna-RM610_RS11965;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS11965;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVRJX010000015.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000015.1 RefSeq region 1 933 . + . ID=NZ_JAVRJX010000015.1:1..933;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000015.1 RefSeq gene 1 75 . - . ID=gene-RM610_RS11970;Name=RM610_RS11970;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11970;old_locus_tag=RM610_12005 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 1 75 . - . ID=rna-RM610_RS11970;Parent=gene-RM610_RS11970;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11970;product=tRNA-Gly NZ_JAVRJX010000015.1 tRNAscan-SE exon 1 75 . - . ID=exon-RM610_RS11970-1;Parent=rna-RM610_RS11970;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11970;product=tRNA-Gly NZ_JAVRJX010000015.1 RefSeq gene 87 161 . - . ID=gene-RM610_RS11975;Name=RM610_RS11975;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11975;old_locus_tag=RM610_12010 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 87 161 . - . ID=rna-RM610_RS11975;Parent=gene-RM610_RS11975;anticodon=(pos:complement(127..129));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11975;product=tRNA-Cys NZ_JAVRJX010000015.1 tRNAscan-SE exon 87 161 . - . ID=exon-RM610_RS11975-1;Parent=rna-RM610_RS11975;anticodon=(pos:complement(127..129));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11975;product=tRNA-Cys NZ_JAVRJX010000015.1 RefSeq gene 170 241 . - . ID=gene-RM610_RS11980;Name=RM610_RS11980;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11980;old_locus_tag=RM610_12015 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 170 241 . - . ID=rna-RM610_RS11980;Parent=gene-RM610_RS11980;anticodon=(pos:complement(207..209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11980;product=tRNA-Gln NZ_JAVRJX010000015.1 tRNAscan-SE exon 170 241 . - . ID=exon-RM610_RS11980-1;Parent=rna-RM610_RS11980;anticodon=(pos:complement(207..209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11980;product=tRNA-Gln NZ_JAVRJX010000015.1 RefSeq gene 258 330 . - . ID=gene-RM610_RS11985;Name=RM610_RS11985;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11985;old_locus_tag=RM610_12020 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 258 330 . - . ID=rna-RM610_RS11985;Parent=gene-RM610_RS11985;anticodon=(pos:complement(295..297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11985;product=tRNA-His NZ_JAVRJX010000015.1 tRNAscan-SE exon 258 330 . - . ID=exon-RM610_RS11985-1;Parent=rna-RM610_RS11985;anticodon=(pos:complement(295..297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11985;product=tRNA-His NZ_JAVRJX010000015.1 RefSeq gene 333 406 . - . ID=gene-RM610_RS11990;Name=RM610_RS11990;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11990;old_locus_tag=RM610_12025 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 333 406 . - . ID=rna-RM610_RS11990;Parent=gene-RM610_RS11990;anticodon=(pos:complement(372..374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11990;product=tRNA-Trp NZ_JAVRJX010000015.1 tRNAscan-SE exon 333 406 . - . ID=exon-RM610_RS11990-1;Parent=rna-RM610_RS11990;anticodon=(pos:complement(372..374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11990;product=tRNA-Trp NZ_JAVRJX010000015.1 RefSeq gene 414 497 . - . ID=gene-RM610_RS11995;Name=RM610_RS11995;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11995;old_locus_tag=RM610_12030 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 414 497 . - . ID=rna-RM610_RS11995;Parent=gene-RM610_RS11995;anticodon=(pos:complement(461..463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11995;product=tRNA-Tyr NZ_JAVRJX010000015.1 tRNAscan-SE exon 414 497 . - . ID=exon-RM610_RS11995-1;Parent=rna-RM610_RS11995;anticodon=(pos:complement(461..463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11995;product=tRNA-Tyr NZ_JAVRJX010000015.1 RefSeq gene 503 578 . - . ID=gene-RM610_RS12000;Name=RM610_RS12000;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS12000;old_locus_tag=RM610_12035 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 503 578 . - . ID=rna-RM610_RS12000;Parent=gene-RM610_RS12000;anticodon=(pos:complement(543..545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12000;product=tRNA-Thr NZ_JAVRJX010000015.1 tRNAscan-SE exon 503 578 . - . ID=exon-RM610_RS12000-1;Parent=rna-RM610_RS12000;anticodon=(pos:complement(543..545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12000;product=tRNA-Thr NZ_JAVRJX010000015.1 RefSeq gene 593 668 . - . ID=gene-RM610_RS12005;Name=RM610_RS12005;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS12005;old_locus_tag=RM610_12040 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 593 668 . - . ID=rna-RM610_RS12005;Parent=gene-RM610_RS12005;anticodon=(pos:complement(633..635));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12005;product=tRNA-Phe NZ_JAVRJX010000015.1 tRNAscan-SE exon 593 668 . - . ID=exon-RM610_RS12005-1;Parent=rna-RM610_RS12005;anticodon=(pos:complement(633..635));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12005;product=tRNA-Phe NZ_JAVRJX010000015.1 RefSeq gene 679 755 . - . ID=gene-RM610_RS12010;Name=RM610_RS12010;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS12010;old_locus_tag=RM610_12045 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 679 755 . - . ID=rna-RM610_RS12010;Parent=gene-RM610_RS12010;anticodon=(pos:complement(719..721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12010;product=tRNA-Asp NZ_JAVRJX010000015.1 tRNAscan-SE exon 679 755 . - . ID=exon-RM610_RS12010-1;Parent=rna-RM610_RS12010;anticodon=(pos:complement(719..721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12010;product=tRNA-Asp NZ_JAVRJX010000015.1 RefSeq gene 767 840 . - . ID=gene-RM610_RS12015;Name=RM610_RS12015;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS12015;old_locus_tag=RM610_12050 NZ_JAVRJX010000015.1 tRNAscan-SE tRNA 767 840 . - . ID=rna-RM610_RS12015;Parent=gene-RM610_RS12015;anticodon=(pos:complement(804..806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12015;product=tRNA-Met NZ_JAVRJX010000015.1 tRNAscan-SE exon 767 840 . - . ID=exon-RM610_RS12015-1;Parent=rna-RM610_RS12015;anticodon=(pos:complement(804..806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS12015;product=tRNA-Met ##sequence-region NZ_JAVRJX010000016.1 1 746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000016.1 RefSeq region 1 746 . + . ID=NZ_JAVRJX010000016.1:1..746;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000016.1 RefSeq gene 1 746 . + . ID=gene-RM610_RS12020;Name=RM610_RS12020;end_range=746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12020;old_locus_tag=RM610_12055;partial=true;start_range=.,1 NZ_JAVRJX010000016.1 Protein Homology CDS 1 746 . + 0 ID=cds-WP_311542389.1;Parent=gene-RM610_RS12020;Dbxref=GenBank:WP_311542389.1;Name=WP_311542389.1;end_range=746,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM610_RS12020;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311542389.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJX010000017.1 1 586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000017.1 RefSeq region 1 586 . + . ID=NZ_JAVRJX010000017.1:1..586;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000017.1 RefSeq gene 1 360 . + . ID=gene-RM610_RS12025;Name=RM610_RS12025;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM610_RS12025;old_locus_tag=RM610_12060;partial=true;start_range=.,1 NZ_JAVRJX010000017.1 cmsearch rRNA 1 360 . + . ID=rna-RM610_RS12025;Parent=gene-RM610_RS12025;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS12025;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVRJX010000017.1 cmsearch exon 1 360 . + . ID=exon-RM610_RS12025-1;Parent=rna-RM610_RS12025;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS12025;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVRJX010000018.1 1 560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000018.1 RefSeq region 1 560 . + . ID=NZ_JAVRJX010000018.1:1..560;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000018.1 RefSeq gene 1 560 . - . ID=gene-RM610_RS12030;Name=RM610_RS12030;end_range=560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12030;old_locus_tag=RM610_12065;partial=true;start_range=.,1 NZ_JAVRJX010000018.1 Protein Homology CDS 1 560 . - 0 ID=cds-WP_311542390.1;Parent=gene-RM610_RS12030;Dbxref=GenBank:WP_311542390.1;Name=WP_311542390.1;end_range=560,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM610_RS12030;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311542390.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJX010000001.1 1 1339295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000001.1 RefSeq region 1 1339295 . + . ID=NZ_JAVRJX010000001.1:1..1339295;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000001.1 RefSeq gene 2 2928 . + . ID=gene-RM610_RS00005;Name=RM610_RS00005;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM610_RS00005;old_locus_tag=RM610_00005 NZ_JAVRJX010000001.1 cmsearch rRNA 2 2928 . + . ID=rna-RM610_RS00005;Parent=gene-RM610_RS00005;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS00005;product=23S ribosomal RNA NZ_JAVRJX010000001.1 cmsearch exon 2 2928 . + . ID=exon-RM610_RS00005-1;Parent=rna-RM610_RS00005;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS00005;product=23S ribosomal RNA NZ_JAVRJX010000001.1 RefSeq gene 3046 3160 . + . ID=gene-RM610_RS00010;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM610_RS00010;old_locus_tag=RM610_00010 NZ_JAVRJX010000001.1 cmsearch rRNA 3046 3160 . + . ID=rna-RM610_RS00010;Parent=gene-RM610_RS00010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS00010;product=5S ribosomal RNA NZ_JAVRJX010000001.1 cmsearch exon 3046 3160 . + . ID=exon-RM610_RS00010-1;Parent=rna-RM610_RS00010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS00010;product=5S ribosomal RNA NZ_JAVRJX010000001.1 RefSeq gene 3279 5222 . + . ID=gene-RM610_RS00015;Name=RM610_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00015;old_locus_tag=RM610_00015 NZ_JAVRJX010000001.1 Protein Homology CDS 3279 5222 . + 0 ID=cds-WP_311541514.1;Parent=gene-RM610_RS00015;Dbxref=GenBank:WP_311541514.1;Name=WP_311541514.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=RM610_RS00015;product=FUSC family protein;protein_id=WP_311541514.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 5319 6734 . - . ID=gene-RM610_RS00020;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=RM610_RS00020;old_locus_tag=RM610_00020 NZ_JAVRJX010000001.1 Protein Homology CDS 5319 6734 . - 0 ID=cds-WP_311541515.1;Parent=gene-RM610_RS00020;Dbxref=GenBank:WP_311541515.1;Name=WP_311541515.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911182.1;locus_tag=RM610_RS00020;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_311541515.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 6844 7731 . + . ID=gene-RM610_RS00025;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=RM610_RS00025;old_locus_tag=RM610_00025 NZ_JAVRJX010000001.1 Protein Homology CDS 6844 7731 . + 0 ID=cds-WP_103158782.1;Parent=gene-RM610_RS00025;Dbxref=GenBank:WP_103158782.1;Name=WP_103158782.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=RM610_RS00025;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_103158782.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 7733 8293 . + . ID=gene-RM610_RS00030;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=RM610_RS00030;old_locus_tag=RM610_00030 NZ_JAVRJX010000001.1 Protein Homology CDS 7733 8293 . + 0 ID=cds-WP_107359563.1;Parent=gene-RM610_RS00030;Dbxref=GenBank:WP_107359563.1;Name=WP_107359563.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499073.1;locus_tag=RM610_RS00030;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_107359563.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 8479 9684 . - . ID=gene-RM610_RS00035;Name=RM610_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00035;old_locus_tag=RM610_00035 NZ_JAVRJX010000001.1 Protein Homology CDS 8479 9684 . - 0 ID=cds-WP_107359564.1;Parent=gene-RM610_RS00035;Dbxref=GenBank:WP_107359564.1;Name=WP_107359564.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=RM610_RS00035;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_107359564.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 9849 10310 . + . ID=gene-RM610_RS00040;Name=RM610_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00040;old_locus_tag=RM610_00040 NZ_JAVRJX010000001.1 Protein Homology CDS 9849 10310 . + 0 ID=cds-WP_037573004.1;Parent=gene-RM610_RS00040;Dbxref=GenBank:WP_037573004.1;Name=WP_037573004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=RM610_RS00040;product=CtsR family transcriptional regulator;protein_id=WP_037573004.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 10355 10861 . + . ID=gene-RM610_RS00045;Name=RM610_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00045;old_locus_tag=RM610_00045 NZ_JAVRJX010000001.1 Protein Homology CDS 10355 10861 . + 0 ID=cds-WP_375712203.1;Parent=gene-RM610_RS00045;Dbxref=GenBank:WP_375712203.1;Name=WP_375712203.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424280.1;locus_tag=RM610_RS00045;product=UvrB/UvrC motif-containing protein;protein_id=WP_375712203.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 10845 11849 . + . ID=gene-RM610_RS00050;Name=RM610_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00050;old_locus_tag=RM610_00050 NZ_JAVRJX010000001.1 Protein Homology CDS 10845 11849 . + 0 ID=cds-WP_037573001.1;Parent=gene-RM610_RS00050;Dbxref=GenBank:WP_037573001.1;Name=WP_037573001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424281.1;locus_tag=RM610_RS00050;product=protein arginine kinase;protein_id=WP_037573001.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 11862 14348 . + . ID=gene-RM610_RS00055;Name=RM610_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00055;old_locus_tag=RM610_00055 NZ_JAVRJX010000001.1 Protein Homology CDS 11862 14348 . + 0 ID=cds-WP_105985695.1;Parent=gene-RM610_RS00055;Dbxref=GenBank:WP_105985695.1;Name=WP_105985695.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169089.1;locus_tag=RM610_RS00055;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_105985695.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 14475 15848 . + . ID=gene-RM610_RS00060;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=RM610_RS00060;old_locus_tag=RM610_00060 NZ_JAVRJX010000001.1 Protein Homology CDS 14475 15848 . + 0 ID=cds-WP_107359567.1;Parent=gene-RM610_RS00060;Dbxref=GenBank:WP_107359567.1;Name=WP_107359567.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1;locus_tag=RM610_RS00060;product=DNA repair protein RadA;protein_id=WP_107359567.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 15865 16929 . + . ID=gene-RM610_RS00065;Name=RM610_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00065;old_locus_tag=RM610_00065 NZ_JAVRJX010000001.1 Protein Homology CDS 15865 16929 . + 0 ID=cds-WP_311541516.1;Parent=gene-RM610_RS00065;Dbxref=GenBank:WP_311541516.1;Name=WP_311541516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424284.1;locus_tag=RM610_RS00065;product=PIN/TRAM domain-containing protein;protein_id=WP_311541516.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 16929 17627 . + . ID=gene-RM610_RS00070;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=RM610_RS00070;old_locus_tag=RM610_00070 NZ_JAVRJX010000001.1 Protein Homology CDS 16929 17627 . + 0 ID=cds-WP_311541517.1;Parent=gene-RM610_RS00070;Dbxref=GenBank:WP_311541517.1;Name=WP_311541517.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=RM610_RS00070;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_311541517.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 17620 18099 . + . ID=gene-RM610_RS00075;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=RM610_RS00075;old_locus_tag=RM610_00075 NZ_JAVRJX010000001.1 Protein Homology CDS 17620 18099 . + 0 ID=cds-WP_107375276.1;Parent=gene-RM610_RS00075;Dbxref=GenBank:WP_107375276.1;Name=WP_107375276.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911171.1;locus_tag=RM610_RS00075;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_107375276.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 18176 19630 . + . ID=gene-RM610_RS00080;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=RM610_RS00080;old_locus_tag=RM610_00080 NZ_JAVRJX010000001.1 Protein Homology CDS 18176 19630 . + 0 ID=cds-WP_107359571.1;Parent=gene-RM610_RS00080;Dbxref=GenBank:WP_107359571.1;Name=WP_107359571.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728607.1;locus_tag=RM610_RS00080;product=glutamate--tRNA ligase;protein_id=WP_107359571.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 19946 20596 . + . ID=gene-RM610_RS00085;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=RM610_RS00085;old_locus_tag=RM610_00085 NZ_JAVRJX010000001.1 Protein Homology CDS 19946 20596 . + 0 ID=cds-WP_259335918.1;Parent=gene-RM610_RS00085;Dbxref=GenBank:WP_259335918.1;Name=WP_259335918.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499083.1;locus_tag=RM610_RS00085;product=serine O-acetyltransferase;protein_id=WP_259335918.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 20580 21980 . + . ID=gene-RM610_RS00090;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=RM610_RS00090;old_locus_tag=RM610_00090 NZ_JAVRJX010000001.1 Protein Homology CDS 20580 21980 . + 0 ID=cds-WP_103158773.1;Parent=gene-RM610_RS00090;Dbxref=GenBank:WP_103158773.1;Name=WP_103158773.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=RM610_RS00090;product=cysteine--tRNA ligase;protein_id=WP_103158773.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 21973 22374 . + . ID=gene-RM610_RS00095;Name=RM610_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00095;old_locus_tag=RM610_00095 NZ_JAVRJX010000001.1 Protein Homology CDS 21973 22374 . + 0 ID=cds-WP_107359572.1;Parent=gene-RM610_RS00095;Dbxref=GenBank:WP_107359572.1;Name=WP_107359572.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=RM610_RS00095;product=Mini-ribonuclease 3;protein_id=WP_107359572.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 22381 23136 . + . ID=gene-RM610_RS00100;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=RM610_RS00100;old_locus_tag=RM610_00100 NZ_JAVRJX010000001.1 Protein Homology CDS 22381 23136 . + 0 ID=cds-WP_107359573.1;Parent=gene-RM610_RS00100;Dbxref=GenBank:WP_107359573.1;Name=WP_107359573.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471471.1;locus_tag=RM610_RS00100;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_107359573.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 23133 23657 . + . ID=gene-RM610_RS00105;Name=RM610_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00105;old_locus_tag=RM610_00105 NZ_JAVRJX010000001.1 Protein Homology CDS 23133 23657 . + 0 ID=cds-WP_107359574.1;Parent=gene-RM610_RS00105;Dbxref=GenBank:WP_107359574.1;Name=WP_107359574.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499087.1;locus_tag=RM610_RS00105;product=NYN domain-containing protein;protein_id=WP_107359574.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 23732 24316 . + . ID=gene-RM610_RS00110;Name=RM610_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00110;old_locus_tag=RM610_00110 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 23732 24316 . + 0 ID=cds-WP_107380977.1;Parent=gene-RM610_RS00110;Dbxref=GenBank:WP_107380977.1;Name=WP_107380977.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS00110;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_107380977.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 24396 24539 . + . ID=gene-RM610_RS00115;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM610_RS00115;old_locus_tag=RM610_00115 NZ_JAVRJX010000001.1 Protein Homology CDS 24396 24539 . + 0 ID=cds-WP_107359576.1;Parent=gene-RM610_RS00115;Dbxref=GenBank:WP_107359576.1;Name=WP_107359576.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR01023.1;locus_tag=RM610_RS00115;product=50S ribosomal protein L33;protein_id=WP_107359576.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 24626 24805 . + . ID=gene-RM610_RS00120;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=RM610_RS00120;old_locus_tag=RM610_00120 NZ_JAVRJX010000001.1 Protein Homology CDS 24626 24805 . + 0 ID=cds-WP_105965085.1;Parent=gene-RM610_RS00120;Dbxref=GenBank:WP_105965085.1;Name=WP_105965085.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=RM610_RS00120;product=preprotein translocase subunit SecE;protein_id=WP_105965085.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 24824 25372 . + . ID=gene-RM610_RS00125;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=RM610_RS00125;old_locus_tag=RM610_00125 NZ_JAVRJX010000001.1 Protein Homology CDS 24824 25372 . + 0 ID=cds-WP_037572959.1;Parent=gene-RM610_RS00125;Dbxref=GenBank:WP_037572959.1;Name=WP_037572959.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=RM610_RS00125;product=transcription termination/antitermination protein NusG;protein_id=WP_037572959.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 25917 26339 . + . ID=gene-RM610_RS00130;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=RM610_RS00130;old_locus_tag=RM610_00130 NZ_JAVRJX010000001.1 Protein Homology CDS 25917 26339 . + 0 ID=cds-WP_016424296.1;Parent=gene-RM610_RS00130;Dbxref=GenBank:WP_016424296.1;Name=WP_016424296.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=RM610_RS00130;product=50S ribosomal protein L11;protein_id=WP_016424296.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 26545 27243 . + . ID=gene-RM610_RS00135;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=RM610_RS00135;old_locus_tag=RM610_00135 NZ_JAVRJX010000001.1 Protein Homology CDS 26545 27243 . + 0 ID=cds-WP_105962898.1;Parent=gene-RM610_RS00135;Dbxref=GenBank:WP_105962898.1;Name=WP_105962898.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=RM610_RS00135;product=50S ribosomal protein L1;protein_id=WP_105962898.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch sequence_feature 27360 27501 . + . ID=id-NZ_JAVRJX010000001.1:27360..27501;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00557,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000001.1 RefSeq gene 27547 28047 . + . ID=gene-RM610_RS00140;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=RM610_RS00140;old_locus_tag=RM610_00140 NZ_JAVRJX010000001.1 Protein Homology CDS 27547 28047 . + 0 ID=cds-WP_037572940.1;Parent=gene-RM610_RS00140;Dbxref=GenBank:WP_037572940.1;Name=WP_037572940.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=RM610_RS00140;product=50S ribosomal protein L10;protein_id=WP_037572940.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 28102 28467 . + . ID=gene-RM610_RS00145;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=RM610_RS00145;old_locus_tag=RM610_00145 NZ_JAVRJX010000001.1 Protein Homology CDS 28102 28467 . + 0 ID=cds-WP_105962899.1;Parent=gene-RM610_RS00145;Dbxref=GenBank:WP_105962899.1;Name=WP_105962899.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=RM610_RS00145;product=50S ribosomal protein L7/L12;protein_id=WP_105962899.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 28549 29157 . + . ID=gene-RM610_RS00150;Name=RM610_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00150;old_locus_tag=RM610_00150 NZ_JAVRJX010000001.1 Protein Homology CDS 28549 29157 . + 0 ID=cds-WP_311541518.1;Parent=gene-RM610_RS00150;Dbxref=GenBank:WP_311541518.1;Name=WP_311541518.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449036.1;locus_tag=RM610_RS00150;product=class I SAM-dependent methyltransferase;protein_id=WP_311541518.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 29369 32920 . + . ID=gene-RM610_RS00155;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=RM610_RS00155;old_locus_tag=RM610_00155 NZ_JAVRJX010000001.1 Protein Homology CDS 29369 32920 . + 0 ID=cds-WP_105985707.1;Parent=gene-RM610_RS00155;Dbxref=GenBank:WP_105985707.1;Name=WP_105985707.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=RM610_RS00155;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_105985707.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 33063 36683 . + . ID=gene-RM610_RS00160;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=RM610_RS00160;old_locus_tag=RM610_00160 NZ_JAVRJX010000001.1 Protein Homology CDS 33063 36683 . + 0 ID=cds-WP_105985708.1;Parent=gene-RM610_RS00160;Dbxref=GenBank:WP_105985708.1;Name=WP_105985708.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=RM610_RS00160;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_105985708.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 36821 37075 . + . ID=gene-RM610_RS00165;Name=RM610_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00165;old_locus_tag=RM610_00165 NZ_JAVRJX010000001.1 Protein Homology CDS 36821 37075 . + 0 ID=cds-WP_105985709.1;Parent=gene-RM610_RS00165;Dbxref=GenBank:WP_105985709.1;Name=WP_105985709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=RM610_RS00165;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_105985709.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 37174 37587 . + . ID=gene-RM610_RS00170;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=RM610_RS00170;old_locus_tag=RM610_00170 NZ_JAVRJX010000001.1 Protein Homology CDS 37174 37587 . + 0 ID=cds-WP_037572921.1;Parent=gene-RM610_RS00170;Dbxref=GenBank:WP_037572921.1;Name=WP_037572921.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=RM610_RS00170;product=30S ribosomal protein S12;protein_id=WP_037572921.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 37670 38140 . + . ID=gene-RM610_RS00175;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=RM610_RS00175;old_locus_tag=RM610_00175 NZ_JAVRJX010000001.1 Protein Homology CDS 37670 38140 . + 0 ID=cds-WP_014614746.1;Parent=gene-RM610_RS00175;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=RM610_RS00175;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 38284 40365 . + . ID=gene-RM610_RS00180;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=RM610_RS00180;old_locus_tag=RM610_00180 NZ_JAVRJX010000001.1 Protein Homology CDS 38284 40365 . + 0 ID=cds-WP_103158763.1;Parent=gene-RM610_RS00180;Dbxref=GenBank:WP_103158763.1;Name=WP_103158763.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=RM610_RS00180;product=elongation factor G;protein_id=WP_103158763.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 40556 41743 . + . ID=gene-RM610_RS00185;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=RM610_RS00185;old_locus_tag=RM610_00185 NZ_JAVRJX010000001.1 Protein Homology CDS 40556 41743 . + 0 ID=cds-WP_107359578.1;Parent=gene-RM610_RS00185;Dbxref=GenBank:WP_107359578.1;Name=WP_107359578.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=RM610_RS00185;product=elongation factor Tu;protein_id=WP_107359578.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 42167 43333 . - . ID=gene-RM610_RS00190;Name=RM610_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00190;old_locus_tag=RM610_00190 NZ_JAVRJX010000001.1 Protein Homology CDS 42167 43333 . - 0 ID=cds-WP_107369366.1;Parent=gene-RM610_RS00190;Dbxref=GenBank:WP_107369366.1;Name=WP_107369366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383855.1;locus_tag=RM610_RS00190;product=M20 family metallopeptidase;protein_id=WP_107369366.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 43442 44632 . + . ID=gene-RM610_RS00195;Name=RM610_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00195;old_locus_tag=RM610_00195 NZ_JAVRJX010000001.1 Protein Homology CDS 43442 44632 . + 0 ID=cds-WP_107369367.1;Parent=gene-RM610_RS00195;Dbxref=GenBank:WP_107369367.1;Name=WP_107369367.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=RM610_RS00195;product=glycine C-acetyltransferase;protein_id=WP_107369367.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 44942 45901 . + . ID=gene-RM610_RS00200;Name=RM610_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00200;old_locus_tag=RM610_00200 NZ_JAVRJX010000001.1 Protein Homology CDS 44942 45901 . + 0 ID=cds-WP_107369368.1;Parent=gene-RM610_RS00200;Dbxref=GenBank:WP_107369368.1;Name=WP_107369368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=RM610_RS00200;product=L-threonine 3-dehydrogenase;protein_id=WP_107369368.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 46171 47247 . + . ID=gene-RM610_RS00205;Name=RM610_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00205;old_locus_tag=RM610_00205 NZ_JAVRJX010000001.1 Protein Homology CDS 46171 47247 . + 0 ID=cds-WP_107369369.1;Parent=gene-RM610_RS00205;Dbxref=GenBank:WP_107369369.1;Name=WP_107369369.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467887.1;locus_tag=RM610_RS00205;product=branched-chain amino acid aminotransferase;protein_id=WP_107369369.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 47332 47670 . - . ID=gene-RM610_RS00210;Name=RM610_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00210;old_locus_tag=RM610_00210 NZ_JAVRJX010000001.1 Protein Homology CDS 47332 47670 . - 0 ID=cds-WP_107380979.1;Parent=gene-RM610_RS00210;Dbxref=GenBank:WP_107380979.1;Name=WP_107380979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511984.1;locus_tag=RM610_RS00210;product=hypothetical protein;protein_id=WP_107380979.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 47906 48286 . + . ID=gene-RM610_RS00215;Name=RM610_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00215;old_locus_tag=RM610_00215 NZ_JAVRJX010000001.1 Protein Homology CDS 47906 48286 . + 0 ID=cds-WP_241955404.1;Parent=gene-RM610_RS00215;Dbxref=GenBank:WP_241955404.1;Name=WP_241955404.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=RM610_RS00215;product=EamA family transporter;protein_id=WP_241955404.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 48258 48755 . + . ID=gene-RM610_RS00220;Name=RM610_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00220;old_locus_tag=RM610_00220 NZ_JAVRJX010000001.1 Protein Homology CDS 48258 48755 . + 0 ID=cds-WP_233649285.1;Parent=gene-RM610_RS00220;Dbxref=GenBank:WP_233649285.1;Name=WP_233649285.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=RM610_RS00220;product=EamA family transporter;protein_id=WP_233649285.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 48858 49547 . + . ID=gene-RM610_RS00225;Name=RM610_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00225;old_locus_tag=RM610_00225 NZ_JAVRJX010000001.1 Protein Homology CDS 48858 49547 . + 0 ID=cds-WP_107369371.1;Parent=gene-RM610_RS00225;Dbxref=GenBank:WP_107369371.1;Name=WP_107369371.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424315.1;locus_tag=RM610_RS00225;product=HAD family hydrolase;protein_id=WP_107369371.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 49584 50249 . - . ID=gene-RM610_RS00230;Name=RM610_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00230;old_locus_tag=RM610_00230 NZ_JAVRJX010000001.1 Protein Homology CDS 49584 50249 . - 0 ID=cds-WP_311541520.1;Parent=gene-RM610_RS00230;Dbxref=GenBank:WP_311541520.1;Name=WP_311541520.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464122.1;locus_tag=RM610_RS00230;product=deoxynucleoside kinase;protein_id=WP_311541520.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 50242 50859 . - . ID=gene-RM610_RS00235;Name=RM610_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00235;old_locus_tag=RM610_00235 NZ_JAVRJX010000001.1 Protein Homology CDS 50242 50859 . - 0 ID=cds-WP_107359208.1;Parent=gene-RM610_RS00235;Dbxref=GenBank:WP_107359208.1;Name=WP_107359208.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723522.1;locus_tag=RM610_RS00235;product=deoxynucleoside kinase;protein_id=WP_107359208.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 50927 51424 . + . ID=gene-RM610_RS00240;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=RM610_RS00240;old_locus_tag=RM610_00240 NZ_JAVRJX010000001.1 Protein Homology CDS 50927 51424 . + 0 ID=cds-WP_037572877.1;Parent=gene-RM610_RS00240;Dbxref=GenBank:WP_037572877.1;Name=WP_037572877.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455718.1;locus_tag=RM610_RS00240;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_037572877.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 51586 52455 . + . ID=gene-RM610_RS00245;Name=RM610_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00245;old_locus_tag=RM610_00245 NZ_JAVRJX010000001.1 Protein Homology CDS 51586 52455 . + 0 ID=cds-WP_037572873.1;Parent=gene-RM610_RS00245;Dbxref=GenBank:WP_037572873.1;Name=WP_037572873.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276687.1;locus_tag=RM610_RS00245;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037572873.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 52471 53037 . + . ID=gene-RM610_RS00250;Name=RM610_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00250;old_locus_tag=RM610_00250 NZ_JAVRJX010000001.1 Protein Homology CDS 52471 53037 . + 0 ID=cds-WP_311541521.1;Parent=gene-RM610_RS00250;Dbxref=GenBank:WP_311541521.1;Name=WP_311541521.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464116.1;locus_tag=RM610_RS00250;product=NADPH-dependent FMN reductase;protein_id=WP_311541521.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 53621 54499 . - . ID=gene-RM610_RS00255;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=RM610_RS00255;old_locus_tag=RM610_00255 NZ_JAVRJX010000001.1 Protein Homology CDS 53621 54499 . - 0 ID=cds-WP_107369374.1;Parent=gene-RM610_RS00255;Dbxref=GenBank:WP_107369374.1;Name=WP_107369374.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=RM610_RS00255;product=GTP cyclohydrolase FolE2;protein_id=WP_107369374.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 54576 55265 . - . ID=gene-RM610_RS00260;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=RM610_RS00260;old_locus_tag=RM610_00260 NZ_JAVRJX010000001.1 Protein Homology CDS 54576 55265 . - 0 ID=cds-WP_037572863.1;Parent=gene-RM610_RS00260;Dbxref=GenBank:WP_037572863.1;Name=WP_037572863.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455710.1;locus_tag=RM610_RS00260;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_037572863.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 55277 55636 . - . ID=gene-RM610_RS00265;Name=RM610_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00265;old_locus_tag=RM610_00265 NZ_JAVRJX010000001.1 Protein Homology CDS 55277 55636 . - 0 ID=cds-WP_107359213.1;Parent=gene-RM610_RS00265;Dbxref=GenBank:WP_107359213.1;Name=WP_107359213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001795843.1;locus_tag=RM610_RS00265;product=YojF family protein;protein_id=WP_107359213.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 55873 56601 . + . ID=gene-RM610_RS00270;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=RM610_RS00270;old_locus_tag=RM610_00270 NZ_JAVRJX010000001.1 Protein Homology CDS 55873 56601 . + 0 ID=cds-WP_107359214.1;Parent=gene-RM610_RS00270;Dbxref=GenBank:WP_107359214.1;Name=WP_107359214.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441156.1;locus_tag=RM610_RS00270;product=glucosamine-6-phosphate deaminase;protein_id=WP_107359214.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 56685 57323 . + . ID=gene-RM610_RS00275;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=RM610_RS00275;old_locus_tag=RM610_00275 NZ_JAVRJX010000001.1 Protein Homology CDS 56685 57323 . + 0 ID=cds-WP_311541522.1;Parent=gene-RM610_RS00275;Dbxref=GenBank:WP_311541522.1;Name=WP_311541522.1;Ontology_term=GO:0005975,GO:0019649,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation|0019649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=RM610_RS00275;product=3-hexulose-6-phosphate synthase;protein_id=WP_311541522.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 57325 57870 . + . ID=gene-RM610_RS00280;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=RM610_RS00280;old_locus_tag=RM610_00280 NZ_JAVRJX010000001.1 Protein Homology CDS 57325 57870 . + 0 ID=cds-WP_037572853.1;Parent=gene-RM610_RS00280;Dbxref=GenBank:WP_037572853.1;Name=WP_037572853.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387319.1;locus_tag=RM610_RS00280;product=6-phospho-3-hexuloisomerase;protein_id=WP_037572853.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 58005 59363 . + . ID=gene-RM610_RS00285;Name=RM610_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00285;old_locus_tag=RM610_00285 NZ_JAVRJX010000001.1 Protein Homology CDS 58005 59363 . + 0 ID=cds-WP_311541523.1;Parent=gene-RM610_RS00285;Dbxref=GenBank:WP_311541523.1;Name=WP_311541523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165753.1;locus_tag=RM610_RS00285;product=AMP-binding protein;protein_id=WP_311541523.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 59356 60501 . + . ID=gene-RM610_RS00290;Name=RM610_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00290;old_locus_tag=RM610_00290 NZ_JAVRJX010000001.1 Protein Homology CDS 59356 60501 . + 0 ID=cds-WP_311541524.1;Parent=gene-RM610_RS00290;Dbxref=GenBank:WP_311541524.1;Name=WP_311541524.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488037.1;locus_tag=RM610_RS00290;product=thiolase family protein;protein_id=WP_311541524.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 60470 60826 . + . ID=gene-RM610_RS00295;Name=RM610_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00295;old_locus_tag=RM610_00295 NZ_JAVRJX010000001.1 Protein Homology CDS 60470 60826 . + 0 ID=cds-WP_311541525.1;Parent=gene-RM610_RS00295;Dbxref=GenBank:WP_311541525.1;Name=WP_311541525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055022.1;locus_tag=RM610_RS00295;product=VraC family protein;protein_id=WP_311541525.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 60826 61095 . + . ID=gene-RM610_RS00300;Name=RM610_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00300;old_locus_tag=RM610_00300 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 60826 61095 . + 0 ID=cds-WP_311541526.1;Parent=gene-RM610_RS00300;Dbxref=GenBank:WP_311541526.1;Name=WP_311541526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS00300;product=hypothetical protein;protein_id=WP_311541526.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 61246 62076 . - . ID=gene-RM610_RS00305;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM610_RS00305;old_locus_tag=RM610_00305 NZ_JAVRJX010000001.1 Protein Homology CDS 61246 62076 . - 0 ID=cds-WP_107359218.1;Parent=gene-RM610_RS00305;Dbxref=GenBank:WP_107359218.1;Name=WP_107359218.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=RM610_RS00305;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_107359218.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 62208 62876 . + . ID=gene-RM610_RS00310;Name=RM610_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00310;old_locus_tag=RM610_00310 NZ_JAVRJX010000001.1 Protein Homology CDS 62208 62876 . + 0 ID=cds-WP_037572834.1;Parent=gene-RM610_RS00310;Dbxref=GenBank:WP_037572834.1;Name=WP_037572834.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=RM610_RS00310;product=uracil-DNA glycosylase;protein_id=WP_037572834.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 62869 63213 . + . ID=gene-RM610_RS00315;Name=RM610_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00315;old_locus_tag=RM610_00315 NZ_JAVRJX010000001.1 Protein Homology CDS 62869 63213 . + 0 ID=cds-WP_311541527.1;Parent=gene-RM610_RS00315;Dbxref=GenBank:WP_311541527.1;Name=WP_311541527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=RM610_RS00315;product=DUF5327 family protein;protein_id=WP_311541527.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 63230 63592 . + . ID=gene-RM610_RS00320;Name=RM610_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00320;old_locus_tag=RM610_00320 NZ_JAVRJX010000001.1 Protein Homology CDS 63230 63592 . + 0 ID=cds-WP_037572828.1;Parent=gene-RM610_RS00320;Dbxref=GenBank:WP_037572828.1;Name=WP_037572828.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=RM610_RS00320;product=DUF423 domain-containing protein;protein_id=WP_037572828.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 63719 65170 . + . ID=gene-RM610_RS00325;Name=RM610_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00325;old_locus_tag=RM610_00325 NZ_JAVRJX010000001.1 Protein Homology CDS 63719 65170 . + 0 ID=cds-WP_311541528.1;Parent=gene-RM610_RS00325;Dbxref=GenBank:WP_311541528.1;Name=WP_311541528.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499138.1;locus_tag=RM610_RS00325;product=APC family permease;protein_id=WP_311541528.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 65373 65930 . + . ID=gene-RM610_RS00330;Name=RM610_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00330;old_locus_tag=RM610_00330 NZ_JAVRJX010000001.1 Protein Homology CDS 65373 65930 . + 0 ID=cds-WP_107369384.1;Parent=gene-RM610_RS00330;Dbxref=GenBank:WP_107369384.1;Name=WP_107369384.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=RM610_RS00330;product=GNAT family N-acetyltransferase;protein_id=WP_107369384.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 66199 66756 . - . ID=gene-RM610_RS00335;Name=RM610_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00335;old_locus_tag=RM610_00335 NZ_JAVRJX010000001.1 Protein Homology CDS 66199 66756 . - 0 ID=cds-WP_311541529.1;Parent=gene-RM610_RS00335;Dbxref=GenBank:WP_311541529.1;Name=WP_311541529.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167960.1;locus_tag=RM610_RS00335;product=TetR/AcrR family transcriptional regulator;protein_id=WP_311541529.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 66882 67529 . + . ID=gene-RM610_RS00340;Name=RM610_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00340;old_locus_tag=RM610_00340 NZ_JAVRJX010000001.1 Protein Homology CDS 66882 67529 . + 0 ID=cds-WP_107359223.1;Parent=gene-RM610_RS00340;Dbxref=GenBank:WP_107359223.1;Name=WP_107359223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=RM610_RS00340;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_107359223.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 67548 69296 . + . ID=gene-RM610_RS00345;Name=RM610_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00345;old_locus_tag=RM610_00345 NZ_JAVRJX010000001.1 Protein Homology CDS 67548 69296 . + 0 ID=cds-WP_311541530.1;Parent=gene-RM610_RS00345;Dbxref=GenBank:WP_311541530.1;Name=WP_311541530.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302501.1;locus_tag=RM610_RS00345;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_311541530.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 69364 70200 . - . ID=gene-RM610_RS00350;Name=RM610_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00350;old_locus_tag=RM610_00350 NZ_JAVRJX010000001.1 Protein Homology CDS 69364 70200 . - 0 ID=cds-WP_037572811.1;Parent=gene-RM610_RS00350;Dbxref=GenBank:WP_037572811.1;Name=WP_037572811.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=RM610_RS00350;product=lipoate--protein ligase family protein;protein_id=WP_037572811.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 70200 71189 . - . ID=gene-RM610_RS00355;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=RM610_RS00355;old_locus_tag=RM610_00355 NZ_JAVRJX010000001.1 Protein Homology CDS 70200 71189 . - 0 ID=cds-WP_311541531.1;Parent=gene-RM610_RS00355;Dbxref=GenBank:WP_311541531.1;Name=WP_311541531.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=RM610_RS00355;product=phosphate acetyltransferase;protein_id=WP_311541531.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 71438 72187 . + . ID=gene-RM610_RS00360;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=RM610_RS00360;old_locus_tag=RM610_00360 NZ_JAVRJX010000001.1 Protein Homology CDS 71438 72187 . + 0 ID=cds-WP_107359225.1;Parent=gene-RM610_RS00360;Dbxref=GenBank:WP_107359225.1;Name=WP_107359225.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=RM610_RS00360;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_107359225.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 72419 73762 . + . ID=gene-RM610_RS00365;Name=RM610_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00365;old_locus_tag=RM610_00365 NZ_JAVRJX010000001.1 Protein Homology CDS 72419 73762 . + 0 ID=cds-WP_107359226.1;Parent=gene-RM610_RS00365;Dbxref=GenBank:WP_107359226.1;Name=WP_107359226.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912338.1;locus_tag=RM610_RS00365;product=APC family permease;protein_id=WP_107359226.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 73844 74560 . + . ID=gene-RM610_RS00370;Name=RM610_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00370;old_locus_tag=RM610_00370 NZ_JAVRJX010000001.1 Protein Homology CDS 73844 74560 . + 0 ID=cds-WP_051604949.1;Parent=gene-RM610_RS00370;Dbxref=GenBank:WP_051604949.1;Name=WP_051604949.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166290.1;locus_tag=RM610_RS00370;product=threonine/serine exporter family protein;protein_id=WP_051604949.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 74565 75032 . + . ID=gene-RM610_RS00375;Name=RM610_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00375;old_locus_tag=RM610_00375 NZ_JAVRJX010000001.1 Protein Homology CDS 74565 75032 . + 0 ID=cds-WP_107359227.1;Parent=gene-RM610_RS00375;Dbxref=GenBank:WP_107359227.1;Name=WP_107359227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303973.1;locus_tag=RM610_RS00375;product=threonine/serine exporter family protein;protein_id=WP_107359227.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 75646 77187 . + . ID=gene-RM610_RS00380;Name=RM610_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00380;old_locus_tag=RM610_00380 NZ_JAVRJX010000001.1 Protein Homology CDS 75646 77187 . + 0 ID=cds-WP_375712197.1;Parent=gene-RM610_RS00380;Dbxref=GenBank:WP_375712197.1;Name=WP_375712197.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509151.1;locus_tag=RM610_RS00380;product=SLC13 family permease;protein_id=WP_375712197.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 77309 77656 . + . ID=gene-RM610_RS00385;Name=RM610_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00385;old_locus_tag=RM610_00385 NZ_JAVRJX010000001.1 Protein Homology CDS 77309 77656 . + 0 ID=cds-WP_037572793.1;Parent=gene-RM610_RS00385;Dbxref=GenBank:WP_037572793.1;Name=WP_037572793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=RM610_RS00385;product=YuzB family protein;protein_id=WP_037572793.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 78044 78583 . + . ID=gene-RM610_RS00390;Name=RM610_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00390;old_locus_tag=RM610_00390 NZ_JAVRJX010000001.1 Protein Homology CDS 78044 78583 . + 0 ID=cds-WP_107359229.1;Parent=gene-RM610_RS00390;Dbxref=GenBank:WP_107359229.1;Name=WP_107359229.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176045.1;locus_tag=RM610_RS00390;product=flavodoxin family protein;protein_id=WP_107359229.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 78751 79233 . + . ID=gene-RM610_RS00395;Name=RM610_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00395;old_locus_tag=RM610_00395 NZ_JAVRJX010000001.1 Protein Homology CDS 78751 79233 . + 0 ID=cds-WP_105985747.1;Parent=gene-RM610_RS00395;Dbxref=GenBank:WP_105985747.1;Name=WP_105985747.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=RM610_RS00395;product=GNAT family N-acetyltransferase;protein_id=WP_105985747.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 79255 80556 . + . ID=gene-RM610_RS00400;Name=RM610_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00400;old_locus_tag=RM610_00400 NZ_JAVRJX010000001.1 Protein Homology CDS 79255 80556 . + 0 ID=cds-WP_107359230.1;Parent=gene-RM610_RS00400;Dbxref=GenBank:WP_107359230.1;Name=WP_107359230.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=RM610_RS00400;product=HD domain-containing protein;protein_id=WP_107359230.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 80580 81086 . + . ID=gene-RM610_RS00405;Name=RM610_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00405;old_locus_tag=RM610_00405 NZ_JAVRJX010000001.1 Protein Homology CDS 80580 81086 . + 0 ID=cds-WP_107359231.1;Parent=gene-RM610_RS00405;Dbxref=GenBank:WP_107359231.1;Name=WP_107359231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384646.1;locus_tag=RM610_RS00405;product=YwhD family protein;protein_id=WP_107359231.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 81193 81618 . + . ID=gene-RM610_RS00410;Name=RM610_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00410;old_locus_tag=RM610_00410 NZ_JAVRJX010000001.1 Protein Homology CDS 81193 81618 . + 0 ID=cds-WP_037572779.1;Parent=gene-RM610_RS00410;Dbxref=GenBank:WP_037572779.1;Name=WP_037572779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359087.1;locus_tag=RM610_RS00410;product=YwiB family protein;protein_id=WP_037572779.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 81605 83263 . + . ID=gene-RM610_RS00415;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=RM610_RS00415;old_locus_tag=RM610_00415 NZ_JAVRJX010000001.1 Protein Homology CDS 81605 83263 . + 0 ID=cds-WP_107359232.1;Parent=gene-RM610_RS00415;Dbxref=GenBank:WP_107359232.1;Name=WP_107359232.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=RM610_RS00415;product=arginine--tRNA ligase;protein_id=WP_107359232.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 83425 84309 . + . ID=gene-RM610_RS00420;Name=RM610_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00420;old_locus_tag=RM610_00420 NZ_JAVRJX010000001.1 Protein Homology CDS 83425 84309 . + 0 ID=cds-WP_107359233.1;Parent=gene-RM610_RS00420;Dbxref=GenBank:WP_107359233.1;Name=WP_107359233.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424359.1;locus_tag=RM610_RS00420;product=ABC transporter substrate-binding protein;protein_id=WP_107359233.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 84296 85261 . + . ID=gene-RM610_RS00425;Name=RM610_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00425;old_locus_tag=RM610_00425 NZ_JAVRJX010000001.1 Protein Homology CDS 84296 85261 . + 0 ID=cds-WP_107359234.1;Parent=gene-RM610_RS00425;Dbxref=GenBank:WP_107359234.1;Name=WP_107359234.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=RM610_RS00425;product=FecCD family ABC transporter permease;protein_id=WP_107359234.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 85358 86062 . + . ID=gene-RM610_RS00430;Name=RM610_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00430;old_locus_tag=RM610_00430 NZ_JAVRJX010000001.1 Protein Homology CDS 85358 86062 . + 0 ID=cds-WP_107369390.1;Parent=gene-RM610_RS00430;Dbxref=GenBank:WP_107369390.1;Name=WP_107369390.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=RM610_RS00430;product=HAD family hydrolase;protein_id=WP_107369390.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 86062 86859 . + . ID=gene-RM610_RS00435;Name=RM610_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00435;old_locus_tag=RM610_00435 NZ_JAVRJX010000001.1 Protein Homology CDS 86062 86859 . + 0 ID=cds-WP_107359236.1;Parent=gene-RM610_RS00435;Dbxref=GenBank:WP_107359236.1;Name=WP_107359236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484047.1;locus_tag=RM610_RS00435;product=alpha/beta fold hydrolase;protein_id=WP_107359236.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 86952 87458 . + . ID=gene-RM610_RS00440;Name=RM610_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00440;old_locus_tag=RM610_00440 NZ_JAVRJX010000001.1 Protein Homology CDS 86952 87458 . + 0 ID=cds-WP_105962918.1;Parent=gene-RM610_RS00440;Dbxref=GenBank:WP_105962918.1;Name=WP_105962918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=RM610_RS00440;product=SA0570 family protein;protein_id=WP_105962918.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 87622 88338 . + . ID=gene-RM610_RS00445;Name=RM610_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00445;old_locus_tag=RM610_00445 NZ_JAVRJX010000001.1 Protein Homology CDS 87622 88338 . + 0 ID=cds-WP_105985755.1;Parent=gene-RM610_RS00445;Dbxref=GenBank:WP_105985755.1;Name=WP_105985755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898709.1;locus_tag=RM610_RS00445;product=hypothetical protein;protein_id=WP_105985755.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 88498 89280 . + . ID=gene-RM610_RS00450;Name=RM610_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00450;old_locus_tag=RM610_00450 NZ_JAVRJX010000001.1 Protein Homology CDS 88498 89280 . + 0 ID=cds-WP_311541532.1;Parent=gene-RM610_RS00450;Dbxref=GenBank:WP_311541532.1;Name=WP_311541532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.7;locus_tag=RM610_RS00450;product=alpha/beta fold hydrolase;protein_id=WP_311541532.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 89447 89818 . - . ID=gene-RM610_RS00455;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=RM610_RS00455;old_locus_tag=RM610_00455 NZ_JAVRJX010000001.1 Protein Homology CDS 89447 89818 . - 0 ID=cds-WP_037566374.1;Parent=gene-RM610_RS00455;Dbxref=GenBank:WP_037566374.1;Name=WP_037566374.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=RM610_RS00455;product=global transcriptional regulator SarA;protein_id=WP_037566374.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 90169 91083 . - . ID=gene-RM610_RS00460;Name=RM610_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00460;old_locus_tag=RM610_00460 NZ_JAVRJX010000001.1 Protein Homology CDS 90169 91083 . - 0 ID=cds-WP_107359238.1;Parent=gene-RM610_RS00460;Dbxref=GenBank:WP_107359238.1;Name=WP_107359238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052760.1;locus_tag=RM610_RS00460;product=hypothetical protein;protein_id=WP_107359238.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 91444 92367 . - . ID=gene-RM610_RS00465;Name=RM610_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00465;old_locus_tag=RM610_00465 NZ_JAVRJX010000001.1 Protein Homology CDS 91444 92367 . - 0 ID=cds-WP_107375295.1;Parent=gene-RM610_RS00465;Dbxref=GenBank:WP_107375295.1;Name=WP_107375295.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=RM610_RS00465;product=DMT family transporter;protein_id=WP_107375295.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 93062 93277 . - . ID=gene-RM610_RS00470;Name=RM610_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00470;old_locus_tag=RM610_00470 NZ_JAVRJX010000001.1 Protein Homology CDS 93062 93277 . - 0 ID=cds-WP_037572755.1;Parent=gene-RM610_RS00470;Dbxref=GenBank:WP_037572755.1;Name=WP_037572755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424369.1;locus_tag=RM610_RS00470;product=DUF2922 domain-containing protein;protein_id=WP_037572755.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 93292 93495 . - . ID=gene-RM610_RS00475;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=RM610_RS00475;old_locus_tag=RM610_00475 NZ_JAVRJX010000001.1 Protein Homology CDS 93292 93495 . - 0 ID=cds-WP_037572754.1;Parent=gene-RM610_RS00475;Dbxref=GenBank:WP_037572754.1;Name=WP_037572754.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=RM610_RS00475;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_037572754.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 93639 94190 . + . ID=gene-RM610_RS00480;Name=RM610_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00480;old_locus_tag=RM610_00480 NZ_JAVRJX010000001.1 Protein Homology CDS 93639 94190 . + 0 ID=cds-WP_311541533.1;Parent=gene-RM610_RS00480;Dbxref=GenBank:WP_311541533.1;Name=WP_311541533.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=RM610_RS00480;product=tyrosine-type recombinase/integrase;protein_id=WP_311541533.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 94216 96600 . + . ID=gene-RM610_RS00485;Name=RM610_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00485;old_locus_tag=RM610_00485 NZ_JAVRJX010000001.1 Protein Homology CDS 94216 96600 . + 0 ID=cds-WP_107381441.1;Parent=gene-RM610_RS00485;Dbxref=GenBank:WP_107381441.1;Name=WP_107381441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276534.1;locus_tag=RM610_RS00485;product=DUF4040 family protein;protein_id=WP_107381441.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 96587 97012 . + . ID=gene-RM610_RS00490;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=RM610_RS00490;old_locus_tag=RM610_00490 NZ_JAVRJX010000001.1 Protein Homology CDS 96587 97012 . + 0 ID=cds-WP_037572748.1;Parent=gene-RM610_RS00490;Dbxref=GenBank:WP_037572748.1;Name=WP_037572748.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=RM610_RS00490;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WP_037572748.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 97009 97353 . + . ID=gene-RM610_RS00495;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=RM610_RS00495;old_locus_tag=RM610_00495 NZ_JAVRJX010000001.1 Protein Homology CDS 97009 97353 . + 0 ID=cds-WP_037572746.1;Parent=gene-RM610_RS00495;Dbxref=GenBank:WP_037572746.1;Name=WP_037572746.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441278.1;locus_tag=RM610_RS00495;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_037572746.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 97346 98848 . + . ID=gene-RM610_RS00500;Name=RM610_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00500;old_locus_tag=RM610_00500 NZ_JAVRJX010000001.1 Protein Homology CDS 97346 98848 . + 0 ID=cds-WP_107359242.1;Parent=gene-RM610_RS00500;Dbxref=GenBank:WP_107359242.1;Name=WP_107359242.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499190.1;locus_tag=RM610_RS00500;product=Na+/H+ antiporter subunit D;protein_id=WP_107359242.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 98845 99327 . + . ID=gene-RM610_RS00505;Name=RM610_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00505;old_locus_tag=RM610_00505 NZ_JAVRJX010000001.1 Protein Homology CDS 98845 99327 . + 0 ID=cds-WP_105985766.1;Parent=gene-RM610_RS00505;Dbxref=GenBank:WP_105985766.1;Name=WP_105985766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071971.1;locus_tag=RM610_RS00505;product=Na+/H+ antiporter subunit E;protein_id=WP_105985766.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 99324 99626 . + . ID=gene-RM610_RS00510;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=RM610_RS00510;old_locus_tag=RM610_00510 NZ_JAVRJX010000001.1 Protein Homology CDS 99324 99626 . + 0 ID=cds-WP_105985767.1;Parent=gene-RM610_RS00510;Dbxref=GenBank:WP_105985767.1;Name=WP_105985767.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276529.1;locus_tag=RM610_RS00510;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WP_105985767.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 99601 100044 . + . ID=gene-RM610_RS00515;Name=RM610_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00515;old_locus_tag=RM610_00515 NZ_JAVRJX010000001.1 Protein Homology CDS 99601 100044 . + 0 ID=cds-WP_105985768.1;Parent=gene-RM610_RS00515;Dbxref=GenBank:WP_105985768.1;Name=WP_105985768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424378.1;locus_tag=RM610_RS00515;product=Na+/H+ antiporter subunit G;protein_id=WP_105985768.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 100223 101137 . - . ID=gene-RM610_RS00520;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=RM610_RS00520;old_locus_tag=RM610_00520 NZ_JAVRJX010000001.1 Protein Homology CDS 100223 101137 . - 0 ID=cds-WP_311542015.1;Parent=gene-RM610_RS00520;Dbxref=GenBank:WP_311542015.1;Name=WP_311542015.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737654.1;locus_tag=RM610_RS00520;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_311542015.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 101137 101976 . - . ID=gene-RM610_RS00525;Name=RM610_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00525;old_locus_tag=RM610_00525 NZ_JAVRJX010000001.1 Protein Homology CDS 101137 101976 . - 0 ID=cds-WP_107375298.1;Parent=gene-RM610_RS00525;Dbxref=GenBank:WP_107375298.1;Name=WP_107375298.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=RM610_RS00525;product=metal ABC transporter permease;protein_id=WP_107375298.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 101951 102727 . - . ID=gene-RM610_RS00530;Name=RM610_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00530;old_locus_tag=RM610_00530 NZ_JAVRJX010000001.1 Protein Homology CDS 101951 102727 . - 0 ID=cds-WP_107381444.1;Parent=gene-RM610_RS00530;Dbxref=GenBank:WP_107381444.1;Name=WP_107381444.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424381.1;locus_tag=RM610_RS00530;product=metal ABC transporter ATP-binding protein;protein_id=WP_107381444.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 102848 103495 . + . ID=gene-RM610_RS00535;Name=RM610_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00535;old_locus_tag=RM610_00535 NZ_JAVRJX010000001.1 Protein Homology CDS 102848 103495 . + 0 ID=cds-WP_107359248.1;Parent=gene-RM610_RS00535;Dbxref=GenBank:WP_107359248.1;Name=WP_107359248.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459837.1;locus_tag=RM610_RS00535;product=metal-dependent transcriptional regulator;protein_id=WP_107359248.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 104080 104826 . - . ID=gene-RM610_RS00540;Name=RM610_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00540;old_locus_tag=RM610_00540 NZ_JAVRJX010000001.1 Protein Homology CDS 104080 104826 . - 0 ID=cds-WP_107375300.1;Parent=gene-RM610_RS00540;Dbxref=GenBank:WP_107375300.1;Name=WP_107375300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424383.1;locus_tag=RM610_RS00540;product=M50 family metallopeptidase;protein_id=WP_107375300.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 104913 105458 . - . ID=gene-RM610_RS00545;Name=RM610_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00545;old_locus_tag=RM610_00545 NZ_JAVRJX010000001.1 Protein Homology CDS 104913 105458 . - 0 ID=cds-WP_107359249.1;Parent=gene-RM610_RS00545;Dbxref=GenBank:WP_107359249.1;Name=WP_107359249.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371703.1;locus_tag=RM610_RS00545;product=sugar O-acetyltransferase;protein_id=WP_107359249.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 105751 106521 . + . ID=gene-RM610_RS00550;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=RM610_RS00550;old_locus_tag=RM610_00550 NZ_JAVRJX010000001.1 Protein Homology CDS 105751 106521 . + 0 ID=cds-WP_233649400.1;Parent=gene-RM610_RS00550;Dbxref=GenBank:WP_233649400.1;Name=WP_233649400.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424384.1;locus_tag=RM610_RS00550;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_233649400.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 106675 107469 . - . ID=gene-RM610_RS00555;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=RM610_RS00555;old_locus_tag=RM610_00555 NZ_JAVRJX010000001.1 Protein Homology CDS 106675 107469 . - 0 ID=cds-WP_107369400.1;Parent=gene-RM610_RS00555;Dbxref=GenBank:WP_107369400.1;Name=WP_107369400.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=RM610_RS00555;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_107369400.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 107869 108672 . + . ID=gene-RM610_RS00560;Name=RM610_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00560;old_locus_tag=RM610_00560 NZ_JAVRJX010000001.1 Protein Homology CDS 107869 108672 . + 0 ID=cds-WP_037573082.1;Parent=gene-RM610_RS00560;Dbxref=GenBank:WP_037573082.1;Name=WP_037573082.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=RM610_RS00560;product=ABC transporter permease;protein_id=WP_037573082.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 108852 109943 . + . ID=gene-RM610_RS00565;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=RM610_RS00565;old_locus_tag=RM610_00565 NZ_JAVRJX010000001.1 Protein Homology CDS 108852 109943 . + 0 ID=cds-WP_107359252.1;Parent=gene-RM610_RS00565;Dbxref=GenBank:WP_107359252.1;Name=WP_107359252.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=RM610_RS00565;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_107359252.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 110087 110485 . + . ID=gene-RM610_RS00570;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=RM610_RS00570;old_locus_tag=RM610_00570 NZ_JAVRJX010000001.1 Protein Homology CDS 110087 110485 . + 0 ID=cds-WP_037572723.1;Parent=gene-RM610_RS00570;Dbxref=GenBank:WP_037572723.1;Name=WP_037572723.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=RM610_RS00570;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_037572723.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 110948 112231 . - . ID=gene-RM610_RS00575;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=RM610_RS00575;old_locus_tag=RM610_00575 NZ_JAVRJX010000001.1 Protein Homology CDS 110948 112231 . - 0 ID=cds-WP_107359253.1;Parent=gene-RM610_RS00575;Dbxref=GenBank:WP_107359253.1;Name=WP_107359253.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499206.1;locus_tag=RM610_RS00575;product=penicillin-binding protein PBP4;protein_id=WP_107359253.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 112489 114213 . + . ID=gene-RM610_RS00580;Name=RM610_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00580;old_locus_tag=RM610_00580 NZ_JAVRJX010000001.1 Protein Homology CDS 112489 114213 . + 0 ID=cds-WP_107359254.1;Parent=gene-RM610_RS00580;Dbxref=GenBank:WP_107359254.1;Name=WP_107359254.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=RM610_RS00580;product=ABC transporter ATP-binding protein;protein_id=WP_107359254.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 114264 114425 . - . ID=gene-RM610_RS00585;Name=RM610_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00585;old_locus_tag=RM610_00585 NZ_JAVRJX010000001.1 Protein Homology CDS 114264 114425 . - 0 ID=cds-WP_037572717.1;Parent=gene-RM610_RS00585;Dbxref=GenBank:WP_037572717.1;Name=WP_037572717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424391.1;locus_tag=RM610_RS00585;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_037572717.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 114437 116431 . - . ID=gene-RM610_RS00590;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=RM610_RS00590;old_locus_tag=RM610_00590 NZ_JAVRJX010000001.1 Protein Homology CDS 114437 116431 . - 0 ID=cds-WP_311541535.1;Parent=gene-RM610_RS00590;Dbxref=GenBank:WP_311541535.1;Name=WP_311541535.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424392.1;locus_tag=RM610_RS00590;product=ferrous iron transport protein B;protein_id=WP_311541535.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 116424 116660 . - . ID=gene-RM610_RS00595;Name=RM610_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00595;old_locus_tag=RM610_00595 NZ_JAVRJX010000001.1 Protein Homology CDS 116424 116660 . - 0 ID=cds-WP_103159324.1;Parent=gene-RM610_RS00595;Dbxref=GenBank:WP_103159324.1;Name=WP_103159324.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=RM610_RS00595;product=FeoA family protein;protein_id=WP_103159324.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 116931 118157 . + . ID=gene-RM610_RS00600;Name=RM610_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00600;old_locus_tag=RM610_00600 NZ_JAVRJX010000001.1 Protein Homology CDS 116931 118157 . + 0 ID=cds-WP_105962924.1;Parent=gene-RM610_RS00600;Dbxref=GenBank:WP_105962924.1;Name=WP_105962924.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=RM610_RS00600;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_105962924.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 118710 119543 . + . ID=gene-RM610_RS00605;Name=RM610_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00605;old_locus_tag=RM610_00605 NZ_JAVRJX010000001.1 Protein Homology CDS 118710 119543 . + 0 ID=cds-WP_311541536.1;Parent=gene-RM610_RS00605;Dbxref=GenBank:WP_311541536.1;Name=WP_311541536.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=RM610_RS00605;product=YitT family protein;protein_id=WP_311541536.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 119817 120623 . + . ID=gene-RM610_RS00610;Name=RM610_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00610;old_locus_tag=RM610_00610 NZ_JAVRJX010000001.1 Protein Homology CDS 119817 120623 . + 0 ID=cds-WP_103159326.1;Parent=gene-RM610_RS00610;Dbxref=GenBank:WP_103159326.1;Name=WP_103159326.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722609.1;locus_tag=RM610_RS00610;product=ABC transporter ATP-binding protein;protein_id=WP_103159326.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 120688 121647 . + . ID=gene-RM610_RS00615;Name=RM610_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00615;old_locus_tag=RM610_00615 NZ_JAVRJX010000001.1 Protein Homology CDS 120688 121647 . + 0 ID=cds-WP_311542016.1;Parent=gene-RM610_RS00615;Dbxref=GenBank:WP_311542016.1;Name=WP_311542016.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508382.1;locus_tag=RM610_RS00615;product=FecCD family ABC transporter permease;protein_id=WP_311542016.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 121644 122660 . + . ID=gene-RM610_RS00620;Name=RM610_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00620;old_locus_tag=RM610_00620 NZ_JAVRJX010000001.1 Protein Homology CDS 121644 122660 . + 0 ID=cds-WP_182472315.1;Parent=gene-RM610_RS00620;Dbxref=GenBank:WP_182472315.1;Name=WP_182472315.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=RM610_RS00620;product=FecCD family ABC transporter permease;protein_id=WP_182472315.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 122826 123326 . + . ID=gene-RM610_RS00625;Name=RM610_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00625;old_locus_tag=RM610_00625 NZ_JAVRJX010000001.1 Protein Homology CDS 122826 123326 . + 0 ID=cds-WP_037572694.1;Parent=gene-RM610_RS00625;Dbxref=GenBank:WP_037572694.1;Name=WP_037572694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490528.1;locus_tag=RM610_RS00625;product=hypothetical protein;protein_id=WP_037572694.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 123515 124954 . + . ID=gene-RM610_RS00630;Name=RM610_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00630;old_locus_tag=RM610_00630 NZ_JAVRJX010000001.1 Protein Homology CDS 123515 124954 . + 0 ID=cds-WP_311541537.1;Parent=gene-RM610_RS00630;Dbxref=GenBank:WP_311541537.1;Name=WP_311541537.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166211.1;locus_tag=RM610_RS00630;product=MDR family MFS transporter;protein_id=WP_311541537.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 125195 126262 . + . ID=gene-RM610_RS00635;Name=RM610_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00635;old_locus_tag=RM610_00635 NZ_JAVRJX010000001.1 Protein Homology CDS 125195 126262 . + 0 ID=cds-WP_037572688.1;Parent=gene-RM610_RS00635;Dbxref=GenBank:WP_037572688.1;Name=WP_037572688.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=RM610_RS00635;product=YkvI family membrane protein;protein_id=WP_037572688.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 126305 127345 . + . ID=gene-RM610_RS00640;Name=RM610_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00640;old_locus_tag=RM610_00640 NZ_JAVRJX010000001.1 Protein Homology CDS 126305 127345 . + 0 ID=cds-WP_107375305.1;Parent=gene-RM610_RS00640;Dbxref=GenBank:WP_107375305.1;Name=WP_107375305.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=RM610_RS00640;product=alpha/beta hydrolase;protein_id=WP_107375305.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 128011 128517 . - . ID=gene-RM610_RS00645;Name=RM610_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00645;old_locus_tag=RM610_00645 NZ_JAVRJX010000001.1 Protein Homology CDS 128011 128517 . - 0 ID=cds-WP_107359581.1;Parent=gene-RM610_RS00645;Dbxref=GenBank:WP_107359581.1;Name=WP_107359581.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=RM610_RS00645;product=GNAT family N-acetyltransferase;protein_id=WP_107359581.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 128630 129577 . + . ID=gene-RM610_RS00650;Name=RM610_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00650;old_locus_tag=RM610_00650 NZ_JAVRJX010000001.1 Protein Homology CDS 128630 129577 . + 0 ID=cds-WP_107375306.1;Parent=gene-RM610_RS00650;Dbxref=GenBank:WP_107375306.1;Name=WP_107375306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424404.1;locus_tag=RM610_RS00650;product=NAD(P)H-binding protein;protein_id=WP_107375306.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 130090 130707 . + . ID=gene-RM610_RS00655;Name=RM610_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00655;old_locus_tag=RM610_00655 NZ_JAVRJX010000001.1 Protein Homology CDS 130090 130707 . + 0 ID=cds-WP_037572680.1;Parent=gene-RM610_RS00655;Dbxref=GenBank:WP_037572680.1;Name=WP_037572680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=RM610_RS00655;product=DUF47 domain-containing protein;protein_id=WP_037572680.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 130722 131723 . + . ID=gene-RM610_RS00660;Name=RM610_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00660;old_locus_tag=RM610_00660 NZ_JAVRJX010000001.1 Protein Homology CDS 130722 131723 . + 0 ID=cds-WP_037572676.1;Parent=gene-RM610_RS00660;Dbxref=GenBank:WP_037572676.1;Name=WP_037572676.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=RM610_RS00660;product=inorganic phosphate transporter;protein_id=WP_037572676.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 131913 132734 . - . ID=gene-RM610_RS00665;Name=RM610_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00665;old_locus_tag=RM610_00665 NZ_JAVRJX010000001.1 Protein Homology CDS 131913 132734 . - 0 ID=cds-WP_107369749.1;Parent=gene-RM610_RS00665;Dbxref=GenBank:WP_107369749.1;Name=WP_107369749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303705.1;locus_tag=RM610_RS00665;product=CHAP domain-containing protein;protein_id=WP_107369749.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 133021 133656 . + . ID=gene-RM610_RS00670;Name=RM610_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00670;old_locus_tag=RM610_00670 NZ_JAVRJX010000001.1 Protein Homology CDS 133021 133656 . + 0 ID=cds-WP_311541538.1;Parent=gene-RM610_RS00670;Dbxref=GenBank:WP_311541538.1;Name=WP_311541538.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472547.1;locus_tag=RM610_RS00670;product=Bax inhibitor-1/YccA family protein;protein_id=WP_311541538.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 133671 133779 . + . ID=id-NZ_JAVRJX010000001.1:133671..133779;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 133838 134437 . + . ID=gene-RM610_RS00675;Name=RM610_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00675;old_locus_tag=RM610_00675 NZ_JAVRJX010000001.1 Protein Homology CDS 133838 134437 . + 0 ID=cds-WP_311541539.1;Parent=gene-RM610_RS00675;Dbxref=GenBank:WP_311541539.1;Name=WP_311541539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014622.7;locus_tag=RM610_RS00675;product=thiamine phosphate synthase;protein_id=WP_311541539.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 134421 134621 . + . ID=gene-RM610_RS00680;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=RM610_RS00680;old_locus_tag=RM610_00680 NZ_JAVRJX010000001.1 Protein Homology CDS 134421 134621 . + 0 ID=cds-WP_105985789.1;Parent=gene-RM610_RS00680;Dbxref=GenBank:WP_105985789.1;Name=WP_105985789.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009036520.1;locus_tag=RM610_RS00680;product=sulfur carrier protein ThiS;protein_id=WP_105985789.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 134623 135390 . + . ID=gene-RM610_RS00685;Name=RM610_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00685;old_locus_tag=RM610_00685 NZ_JAVRJX010000001.1 Protein Homology CDS 134623 135390 . + 0 ID=cds-WP_107359585.1;Parent=gene-RM610_RS00685;Dbxref=GenBank:WP_107359585.1;Name=WP_107359585.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728710.1;locus_tag=RM610_RS00685;product=thiazole synthase;protein_id=WP_107359585.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 135390 136388 . + . ID=gene-RM610_RS00690;Name=RM610_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00690;old_locus_tag=RM610_00690 NZ_JAVRJX010000001.1 Protein Homology CDS 135390 136388 . + 0 ID=cds-WP_311541540.1;Parent=gene-RM610_RS00690;Dbxref=GenBank:WP_311541540.1;Name=WP_311541540.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=RM610_RS00690;product=HesA/MoeB/ThiF family protein;protein_id=WP_311541540.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 136463 137176 . + . ID=gene-RM610_RS00695;Name=RM610_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00695;old_locus_tag=RM610_00695 NZ_JAVRJX010000001.1 Protein Homology CDS 136463 137176 . + 0 ID=cds-WP_107359587.1;Parent=gene-RM610_RS00695;Dbxref=GenBank:WP_107359587.1;Name=WP_107359587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424428.1;locus_tag=RM610_RS00695;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_107359587.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 137392 137970 . + . ID=gene-RM610_RS00700;Name=RM610_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00700;old_locus_tag=RM610_00700 NZ_JAVRJX010000001.1 Protein Homology CDS 137392 137970 . + 0 ID=cds-WP_069191674.1;Parent=gene-RM610_RS00700;Dbxref=GenBank:WP_069191674.1;Name=WP_069191674.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=RM610_RS00700;product=ribonuclease FAU-1 family protein;protein_id=WP_069191674.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 138058 138924 . + . ID=gene-RM610_RS00705;Name=RM610_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00705;old_locus_tag=RM610_00705 NZ_JAVRJX010000001.1 Protein Homology CDS 138058 138924 . + 0 ID=cds-WP_037572662.1;Parent=gene-RM610_RS00705;Dbxref=GenBank:WP_037572662.1;Name=WP_037572662.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687413.1;locus_tag=RM610_RS00705;product=LysR family transcriptional regulator;protein_id=WP_037572662.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 138943 140145 . + . ID=gene-RM610_RS00710;Name=RM610_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00710;old_locus_tag=RM610_00710 NZ_JAVRJX010000001.1 Protein Homology CDS 138943 140145 . + 0 ID=cds-WP_107359588.1;Parent=gene-RM610_RS00710;Dbxref=GenBank:WP_107359588.1;Name=WP_107359588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383172.1;locus_tag=RM610_RS00710;product=sugar efflux transporter;protein_id=WP_107359588.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 140164 140652 . + . ID=gene-RM610_RS00715;Name=RM610_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00715;old_locus_tag=RM610_00715 NZ_JAVRJX010000001.1 Protein Homology CDS 140164 140652 . + 0 ID=cds-WP_107359589.1;Parent=gene-RM610_RS00715;Dbxref=GenBank:WP_107359589.1;Name=WP_107359589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187125.1;locus_tag=RM610_RS00715;product=DUF456 domain-containing protein;protein_id=WP_107359589.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 140839 141543 . - . ID=gene-RM610_RS00720;Name=RM610_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00720;old_locus_tag=RM610_00720 NZ_JAVRJX010000001.1 Protein Homology CDS 140839 141543 . - 0 ID=cds-WP_107364487.1;Parent=gene-RM610_RS00720;Dbxref=GenBank:WP_107364487.1;Name=WP_107364487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=RM610_RS00720;product=DUF1129 family protein;protein_id=WP_107364487.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 141635 142084 . + . ID=gene-RM610_RS00725;Name=RM610_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00725;old_locus_tag=RM610_00725 NZ_JAVRJX010000001.1 Protein Homology CDS 141635 142084 . + 0 ID=cds-WP_157946088.1;Parent=gene-RM610_RS00725;Dbxref=GenBank:WP_157946088.1;Name=WP_157946088.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF025054.7;locus_tag=RM610_RS00725;product=GNAT family N-acetyltransferase;protein_id=WP_157946088.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 142149 142511 . + . ID=gene-RM610_RS00730;Name=RM610_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00730;old_locus_tag=RM610_00730 NZ_JAVRJX010000001.1 Protein Homology CDS 142149 142511 . + 0 ID=cds-WP_228512604.1;Parent=gene-RM610_RS00730;Dbxref=GenBank:WP_228512604.1;Name=WP_228512604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614582.1;locus_tag=RM610_RS00730;product=SA0632 family lipoprotein;protein_id=WP_228512604.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 142575 142874 . + . ID=gene-RM610_RS00735;Name=RM610_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00735;old_locus_tag=RM610_00735 NZ_JAVRJX010000001.1 Protein Homology CDS 142575 142874 . + 0 ID=cds-WP_037572650.1;Parent=gene-RM610_RS00735;Dbxref=GenBank:WP_037572650.1;Name=WP_037572650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=RM610_RS00735;product=hypothetical protein;protein_id=WP_037572650.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 142968 143519 . + . ID=gene-RM610_RS00740;Name=RM610_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00740;old_locus_tag=RM610_00740 NZ_JAVRJX010000001.1 Protein Homology CDS 142968 143519 . + 0 ID=cds-WP_105985795.1;Parent=gene-RM610_RS00740;Dbxref=GenBank:WP_105985795.1;Name=WP_105985795.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481469.1;locus_tag=RM610_RS00740;product=GNAT family N-acetyltransferase;protein_id=WP_105985795.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 143549 144115 . - . ID=gene-RM610_RS00745;Name=RM610_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00745;old_locus_tag=RM610_00745 NZ_JAVRJX010000001.1 Protein Homology CDS 143549 144115 . - 0 ID=cds-WP_107369750.1;Parent=gene-RM610_RS00745;Dbxref=GenBank:WP_107369750.1;Name=WP_107369750.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=RM610_RS00745;product=LOG family protein;protein_id=WP_107369750.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 144115 144576 . - . ID=gene-RM610_RS00750;Name=RM610_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00750;old_locus_tag=RM610_00750 NZ_JAVRJX010000001.1 Protein Homology CDS 144115 144576 . - 0 ID=cds-WP_311541542.1;Parent=gene-RM610_RS00750;Dbxref=GenBank:WP_311541542.1;Name=WP_311541542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424439.1;locus_tag=RM610_RS00750;product=YaiI/YqxD family protein;protein_id=WP_311541542.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 144578 145885 . - . ID=gene-RM610_RS12100;Name=RM610_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12100 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 144578 145885 . - 0 ID=cds-WP_446289376.1;Parent=gene-RM610_RS12100;Dbxref=GenBank:WP_446289376.1;Name=WP_446289376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS12100;product=hypothetical protein;protein_id=WP_446289376.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 146240 146596 . - . ID=gene-RM610_RS00760;Name=RM610_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00760;old_locus_tag=RM610_00760 NZ_JAVRJX010000001.1 Protein Homology CDS 146240 146596 . - 0 ID=cds-WP_037572641.1;Parent=gene-RM610_RS00760;Dbxref=GenBank:WP_037572641.1;Name=WP_037572641.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499528.1;locus_tag=RM610_RS00760;product=DoxX family protein;protein_id=WP_037572641.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 146657 147274 . - . ID=gene-RM610_RS00765;Name=RM610_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00765;old_locus_tag=RM610_00765 NZ_JAVRJX010000001.1 Protein Homology CDS 146657 147274 . - 0 ID=cds-WP_311541543.1;Parent=gene-RM610_RS00765;Dbxref=GenBank:WP_311541543.1;Name=WP_311541543.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM610_RS00765;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311541543.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 147580 148434 . - . ID=gene-RM610_RS00770;Name=RM610_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00770;old_locus_tag=RM610_00770 NZ_JAVRJX010000001.1 Protein Homology CDS 147580 148434 . - 0 ID=cds-WP_037572635.1;Parent=gene-RM610_RS00770;Dbxref=GenBank:WP_037572635.1;Name=WP_037572635.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=RM610_RS00770;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_037572635.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 148681 150285 . + . ID=gene-RM610_RS00775;Name=RM610_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00775;old_locus_tag=RM610_00775 NZ_JAVRJX010000001.1 Protein Homology CDS 148681 150285 . + 0 ID=cds-WP_311541544.1;Parent=gene-RM610_RS00775;Dbxref=GenBank:WP_311541544.1;Name=WP_311541544.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=L-cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737167.1;locus_tag=RM610_RS00775;product=ABC transporter ATP-binding protein/permease;protein_id=WP_311541544.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 150342 151985 . + . ID=gene-RM610_RS00780;Name=RM610_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00780;old_locus_tag=RM610_00780 NZ_JAVRJX010000001.1 Protein Homology CDS 150342 151985 . + 0 ID=cds-WP_185958001.1;Parent=gene-RM610_RS00780;Dbxref=GenBank:WP_185958001.1;Name=WP_185958001.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168568.1;locus_tag=RM610_RS00780;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_185958001.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 152354 152791 . - . ID=gene-RM610_RS00785;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=RM610_RS00785;old_locus_tag=RM610_00785 NZ_JAVRJX010000001.1 Protein Homology CDS 152354 152791 . - 0 ID=cds-WP_037572629.1;Parent=gene-RM610_RS00785;Dbxref=GenBank:WP_037572629.1;Name=WP_037572629.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=RM610_RS00785;product=global transcriptional regulator MgrA;protein_id=WP_037572629.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 153012 153932 . + . ID=gene-RM610_RS00790;Name=RM610_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00790;old_locus_tag=RM610_00790 NZ_JAVRJX010000001.1 Protein Homology CDS 153012 153932 . + 0 ID=cds-WP_107369743.1;Parent=gene-RM610_RS00790;Dbxref=GenBank:WP_107369743.1;Name=WP_107369743.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014542.7;locus_tag=RM610_RS00790;product=CobW family GTP-binding protein;protein_id=WP_107369743.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 153953 154861 . + . ID=gene-RM610_RS00795;Name=RM610_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00795;old_locus_tag=RM610_00795 NZ_JAVRJX010000001.1 Protein Homology CDS 153953 154861 . + 0 ID=cds-WP_107376294.1;Parent=gene-RM610_RS00795;Dbxref=GenBank:WP_107376294.1;Name=WP_107376294.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166176.1;locus_tag=RM610_RS00795;product=aldo/keto reductase;protein_id=WP_107376294.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 154886 155170 . + . ID=gene-RM610_RS00800;Name=RM610_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00800;old_locus_tag=RM610_00800 NZ_JAVRJX010000001.1 Protein Homology CDS 154886 155170 . + 0 ID=cds-WP_107359597.1;Parent=gene-RM610_RS00800;Dbxref=GenBank:WP_107359597.1;Name=WP_107359597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=RM610_RS00800;product=hypothetical protein;protein_id=WP_107359597.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 155310 156251 . + . ID=gene-RM610_RS00805;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=RM610_RS00805;old_locus_tag=RM610_00805 NZ_JAVRJX010000001.1 Protein Homology CDS 155310 156251 . + 0 ID=cds-WP_107376296.1;Parent=gene-RM610_RS00805;Dbxref=GenBank:WP_107376296.1;Name=WP_107376296.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=RM610_RS00805;product=malate dehydrogenase;protein_id=WP_107376296.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 156457 157173 . - . ID=gene-RM610_RS00810;Name=RM610_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00810;old_locus_tag=RM610_00810 NZ_JAVRJX010000001.1 Protein Homology CDS 156457 157173 . - 0 ID=cds-WP_311541545.1;Parent=gene-RM610_RS00810;Dbxref=GenBank:WP_311541545.1;Name=WP_311541545.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168562.1;locus_tag=RM610_RS00810;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311541545.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 157460 158077 . - . ID=gene-RM610_RS00820;Name=RM610_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00820;old_locus_tag=RM610_00820 NZ_JAVRJX010000001.1 Protein Homology CDS 157460 158077 . - 0 ID=cds-WP_311541546.1;Parent=gene-RM610_RS00820;Dbxref=GenBank:WP_311541546.1;Name=WP_311541546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=RM610_RS00820;product=DUF1361 domain-containing protein;protein_id=WP_311541546.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 158368 159528 . + . ID=gene-RM610_RS00825;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=RM610_RS00825;old_locus_tag=RM610_00825 NZ_JAVRJX010000001.1 Protein Homology CDS 158368 159528 . + 0 ID=cds-WP_311541547.1;Parent=gene-RM610_RS00825;Dbxref=GenBank:WP_311541547.1;Name=WP_311541547.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=RM610_RS00825;product=multidrug efflux MFS transporter NorA;protein_id=WP_311541547.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 159597 161918 . + . ID=gene-RM610_RS00830;Name=RM610_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00830;old_locus_tag=RM610_00830 NZ_JAVRJX010000001.1 Protein Homology CDS 159597 161918 . + 0 ID=cds-WP_311541548.1;Parent=gene-RM610_RS00830;Dbxref=GenBank:WP_311541548.1;Name=WP_311541548.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=RM610_RS00830;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_311541548.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 161937 162413 . + . ID=gene-RM610_RS00835;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=RM610_RS00835;old_locus_tag=RM610_00835 NZ_JAVRJX010000001.1 Protein Homology CDS 161937 162413 . + 0 ID=cds-WP_311541549.1;Parent=gene-RM610_RS00835;Dbxref=GenBank:WP_311541549.1;Name=WP_311541549.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459774.1;locus_tag=RM610_RS00835;product=Cys-tRNA(Pro) deacylase;protein_id=WP_311541549.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 162566 163321 . + . ID=gene-RM610_RS00840;Name=RM610_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00840;old_locus_tag=RM610_00840 NZ_JAVRJX010000001.1 Protein Homology CDS 162566 163321 . + 0 ID=cds-WP_107375879.1;Parent=gene-RM610_RS00840;Dbxref=GenBank:WP_107375879.1;Name=WP_107375879.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483961.1;locus_tag=RM610_RS00840;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_107375879.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 163318 164241 . + . ID=gene-RM610_RS00845;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=RM610_RS00845;old_locus_tag=RM610_00845 NZ_JAVRJX010000001.1 Protein Homology CDS 163318 164241 . + 0 ID=cds-WP_311541550.1;Parent=gene-RM610_RS00845;Dbxref=GenBank:WP_311541550.1;Name=WP_311541550.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=RM610_RS00845;product=1-phosphofructokinase;protein_id=WP_311541550.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 164243 166162 . + . ID=gene-RM610_RS00850;Name=RM610_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00850;old_locus_tag=RM610_00850 NZ_JAVRJX010000001.1 Protein Homology CDS 164243 166162 . + 0 ID=cds-WP_311541551.1;Parent=gene-RM610_RS00850;Dbxref=GenBank:WP_311541551.1;Name=WP_311541551.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=RM610_RS00850;product=PTS fructose transporter subunit IIABC;protein_id=WP_311541551.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 166634 167998 . + . ID=gene-RM610_RS00855;Name=RM610_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00855;old_locus_tag=RM610_00855 NZ_JAVRJX010000001.1 Protein Homology CDS 166634 167998 . + 0 ID=cds-WP_103159345.1;Parent=gene-RM610_RS00855;Dbxref=GenBank:WP_103159345.1;Name=WP_103159345.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481493.1;locus_tag=RM610_RS00855;product=hemolysin family protein;protein_id=WP_103159345.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 168323 169288 . + . ID=gene-RM610_RS00860;Name=RM610_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00860;old_locus_tag=RM610_00860 NZ_JAVRJX010000001.1 Protein Homology CDS 168323 169288 . + 0 ID=cds-WP_105985813.1;Parent=gene-RM610_RS00860;Dbxref=GenBank:WP_105985813.1;Name=WP_105985813.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728730.1;locus_tag=RM610_RS00860;product=glycosyltransferase family 2 protein;protein_id=WP_105985813.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 169663 169920 . - . ID=gene-RM610_RS00865;Name=RM610_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00865;old_locus_tag=RM610_00865 NZ_JAVRJX010000001.1 Protein Homology CDS 169663 169920 . - 0 ID=cds-WP_107369732.1;Parent=gene-RM610_RS00865;Dbxref=GenBank:WP_107369732.1;Name=WP_107369732.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481501.1;locus_tag=RM610_RS00865;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_107369732.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 169997 170584 . - . ID=gene-RM610_RS00870;Name=RM610_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00870;old_locus_tag=RM610_00870 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 169997 170584 . - 0 ID=cds-WP_311541552.1;Parent=gene-RM610_RS00870;Dbxref=GenBank:WP_311541552.1;Name=WP_311541552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS00870;product=hypothetical protein;protein_id=WP_311541552.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 170686 171399 . - . ID=gene-RM610_RS00875;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=RM610_RS00875;old_locus_tag=RM610_00875 NZ_JAVRJX010000001.1 Protein Homology CDS 170686 171399 . - 0 ID=cds-WP_311541553.1;Parent=gene-RM610_RS00875;Dbxref=GenBank:WP_311541553.1;Name=WP_311541553.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=RM610_RS00875;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_311541553.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 171392 171823 . - . ID=gene-RM610_RS00880;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=RM610_RS00880;old_locus_tag=RM610_00880 NZ_JAVRJX010000001.1 Protein Homology CDS 171392 171823 . - 0 ID=cds-WP_311541554.1;Parent=gene-RM610_RS00880;Dbxref=GenBank:WP_311541554.1;Name=WP_311541554.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=RM610_RS00880;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_311541554.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 171820 172491 . - . ID=gene-RM610_RS00885;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=RM610_RS00885;old_locus_tag=RM610_00885 NZ_JAVRJX010000001.1 Protein Homology CDS 171820 172491 . - 0 ID=cds-WP_311541555.1;Parent=gene-RM610_RS00885;Dbxref=GenBank:WP_311541555.1;Name=WP_311541555.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424465.1;locus_tag=RM610_RS00885;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_311541555.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 172823 173416 . + . ID=gene-RM610_RS00890;Name=RM610_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00890;old_locus_tag=RM610_00890 NZ_JAVRJX010000001.1 Protein Homology CDS 172823 173416 . + 0 ID=cds-WP_107359637.1;Parent=gene-RM610_RS00890;Dbxref=GenBank:WP_107359637.1;Name=WP_107359637.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=RM610_RS00890;product=anthranilate synthase component II;protein_id=WP_107359637.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 173400 174536 . + . ID=gene-RM610_RS00895;Name=RM610_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00895;old_locus_tag=RM610_00895 NZ_JAVRJX010000001.1 Protein Homology CDS 173400 174536 . + 0 ID=cds-WP_311541556.1;Parent=gene-RM610_RS00895;Dbxref=GenBank:WP_311541556.1;Name=WP_311541556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=RM610_RS00895;product=chorismate-binding protein;protein_id=WP_311541556.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 174540 175148 . + . ID=gene-RM610_RS00900;Name=RM610_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00900;old_locus_tag=RM610_00900 NZ_JAVRJX010000001.1 Protein Homology CDS 174540 175148 . + 0 ID=cds-WP_194746261.1;Parent=gene-RM610_RS00900;Dbxref=GenBank:WP_194746261.1;Name=WP_194746261.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013247.7;locus_tag=RM610_RS00900;product=aminotransferase class IV;protein_id=WP_194746261.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 175381 176064 . + . ID=gene-RM610_RS00905;Name=RM610_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00905;old_locus_tag=RM610_00905 NZ_JAVRJX010000001.1 Protein Homology CDS 175381 176064 . + 0 ID=cds-WP_105965138.1;Parent=gene-RM610_RS00905;Dbxref=GenBank:WP_105965138.1;Name=WP_105965138.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452712.1;locus_tag=RM610_RS00905;product=5-oxoprolinase subunit B family protein;protein_id=WP_105965138.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 176061 177065 . + . ID=gene-RM610_RS00910;Name=RM610_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00910;old_locus_tag=RM610_00910 NZ_JAVRJX010000001.1 Protein Homology CDS 176061 177065 . + 0 ID=cds-WP_037572575.1;Parent=gene-RM610_RS00910;Dbxref=GenBank:WP_037572575.1;Name=WP_037572575.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=RM610_RS00910;product=5-oxoprolinase subunit C family protein;protein_id=WP_037572575.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 177566 179503 . + . ID=gene-RM610_RS00915;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=RM610_RS00915;old_locus_tag=RM610_00915 NZ_JAVRJX010000001.1 Protein Homology CDS 177566 179503 . + 0 ID=cds-WP_107381187.1;Parent=gene-RM610_RS00915;Dbxref=GenBank:WP_107381187.1;Name=WP_107381187.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166148.1;locus_tag=RM610_RS00915;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_107381187.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 179560 180375 . - . ID=gene-RM610_RS00920;Name=RM610_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00920;old_locus_tag=RM610_00920 NZ_JAVRJX010000001.1 Protein Homology CDS 179560 180375 . - 0 ID=cds-WP_107381188.1;Parent=gene-RM610_RS00920;Dbxref=GenBank:WP_107381188.1;Name=WP_107381188.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276437.1;locus_tag=RM610_RS00920;product=ZIP family metal transporter;protein_id=WP_107381188.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 180488 182374 . + . ID=gene-RM610_RS00925;Name=RM610_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00925;old_locus_tag=RM610_00925 NZ_JAVRJX010000001.1 Protein Homology CDS 180488 182374 . + 0 ID=cds-WP_311541557.1;Parent=gene-RM610_RS00925;Dbxref=GenBank:WP_311541557.1;Name=WP_311541557.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=RM610_RS00925;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_311541557.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 182376 184154 . + . ID=gene-RM610_RS00930;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=RM610_RS00930;old_locus_tag=RM610_00930 NZ_JAVRJX010000001.1 Protein Homology CDS 182376 184154 . + 0 ID=cds-WP_107369721.1;Parent=gene-RM610_RS00930;Dbxref=GenBank:WP_107369721.1;Name=WP_107369721.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=RM610_RS00930;product=DNA helicase RecQ;protein_id=WP_107369721.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 184377 185330 . + . ID=gene-RM610_RS00935;Name=RM610_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00935;old_locus_tag=RM610_00935 NZ_JAVRJX010000001.1 Protein Homology CDS 184377 185330 . + 0 ID=cds-WP_311541558.1;Parent=gene-RM610_RS00935;Dbxref=GenBank:WP_311541558.1;Name=WP_311541558.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168533.1;locus_tag=RM610_RS00935;product=ABC transporter ATP-binding protein;protein_id=WP_311541558.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 185327 186841 . + . ID=gene-RM610_RS00940;Name=RM610_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00940;old_locus_tag=RM610_00940 NZ_JAVRJX010000001.1 Protein Homology CDS 185327 186841 . + 0 ID=cds-WP_107375891.1;Parent=gene-RM610_RS00940;Dbxref=GenBank:WP_107375891.1;Name=WP_107375891.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441471.1;locus_tag=RM610_RS00940;product=ABC transporter permease/substrate-binding protein;protein_id=WP_107375891.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 187024 188073 . + . ID=gene-RM610_RS00945;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=RM610_RS00945;old_locus_tag=RM610_00945 NZ_JAVRJX010000001.1 Protein Homology CDS 187024 188073 . + 0 ID=cds-WP_107375892.1;Parent=gene-RM610_RS00945;Dbxref=GenBank:WP_107375892.1;Name=WP_107375892.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=RM610_RS00945;product=histidinol-phosphate transaminase;protein_id=WP_107375892.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 188144 188671 . + . ID=gene-RM610_RS00950;Name=RM610_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00950;old_locus_tag=RM610_00950 NZ_JAVRJX010000001.1 Protein Homology CDS 188144 188671 . + 0 ID=cds-WP_037572553.1;Parent=gene-RM610_RS00950;Dbxref=GenBank:WP_037572553.1;Name=WP_037572553.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424492.1;locus_tag=RM610_RS00950;product=5' nucleotidase%2C NT5C type;protein_id=WP_037572553.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 188728 189654 . - . ID=gene-RM610_RS00955;Name=RM610_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00955;old_locus_tag=RM610_00955 NZ_JAVRJX010000001.1 Protein Homology CDS 188728 189654 . - 0 ID=cds-WP_107375894.1;Parent=gene-RM610_RS00955;Dbxref=GenBank:WP_107375894.1;Name=WP_107375894.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424493.1;locus_tag=RM610_RS00955;product=diacylglycerol/lipid kinase family protein;protein_id=WP_107375894.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 189892 191403 . - . ID=gene-RM610_RS00960;Name=RM610_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00960;old_locus_tag=RM610_00960 NZ_JAVRJX010000001.1 Protein Homology CDS 189892 191403 . - 0 ID=cds-WP_107359649.1;Parent=gene-RM610_RS00960;Dbxref=GenBank:WP_107359649.1;Name=WP_107359649.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=RM610_RS00960;product=peptide MFS transporter;protein_id=WP_107359649.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 191580 192080 . - . ID=gene-RM610_RS00965;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=RM610_RS00965;old_locus_tag=RM610_00965 NZ_JAVRJX010000001.1 Protein Homology CDS 191580 192080 . - 0 ID=cds-WP_037572545.1;Parent=gene-RM610_RS00965;Dbxref=GenBank:WP_037572545.1;Name=WP_037572545.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479355.1;locus_tag=RM610_RS00965;product=preQ(1) synthase;protein_id=WP_037572545.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 192103 192975 . - . ID=gene-RM610_RS00970;Name=RM610_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00970;old_locus_tag=RM610_00970 NZ_JAVRJX010000001.1 Protein Homology CDS 192103 192975 . - 0 ID=cds-WP_311541559.1;Parent=gene-RM610_RS00970;Dbxref=GenBank:WP_311541559.1;Name=WP_311541559.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636675.1;locus_tag=RM610_RS00970;product=DMT family transporter;protein_id=WP_311541559.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 193658 194047 . + . ID=gene-RM610_RS00975;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=RM610_RS00975;old_locus_tag=RM610_00975 NZ_JAVRJX010000001.1 Protein Homology CDS 193658 194047 . + 0 ID=cds-WP_037572538.1;Parent=gene-RM610_RS00975;Dbxref=GenBank:WP_037572538.1;Name=WP_037572538.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=RM610_RS00975;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_037572538.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 194019 196124 . + . ID=gene-RM610_RS00980;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=RM610_RS00980;old_locus_tag=RM610_00980 NZ_JAVRJX010000001.1 Protein Homology CDS 194019 196124 . + 0 ID=cds-WP_311541560.1;Parent=gene-RM610_RS00980;Dbxref=GenBank:WP_311541560.1;Name=WP_311541560.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=RM610_RS00980;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_311541560.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 196371 197342 . + . ID=gene-RM610_RS00985;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=RM610_RS00985;old_locus_tag=RM610_00985 NZ_JAVRJX010000001.1 Protein Homology CDS 196371 197342 . + 0 ID=cds-WP_037572532.1;Parent=gene-RM610_RS00985;Dbxref=GenBank:WP_037572532.1;Name=WP_037572532.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499303.1;locus_tag=RM610_RS00985;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_037572532.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 197543 197857 . - . ID=gene-RM610_RS00990;Name=RM610_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS00990;old_locus_tag=RM610_00990 NZ_JAVRJX010000001.1 Protein Homology CDS 197543 197857 . - 0 ID=cds-WP_037572530.1;Parent=gene-RM610_RS00990;Dbxref=GenBank:WP_037572530.1;Name=WP_037572530.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484624.1;locus_tag=RM610_RS00990;product=CHY zinc finger protein;protein_id=WP_037572530.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 197873 198799 . - . ID=gene-RM610_RS00995;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=RM610_RS00995;old_locus_tag=RM610_00995 NZ_JAVRJX010000001.1 Protein Homology CDS 197873 198799 . - 0 ID=cds-WP_107381192.1;Parent=gene-RM610_RS00995;Dbxref=GenBank:WP_107381192.1;Name=WP_107381192.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471788.1;locus_tag=RM610_RS00995;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_107381192.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 198872 199390 . - . ID=gene-RM610_RS01000;Name=RM610_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01000;old_locus_tag=RM610_01000 NZ_JAVRJX010000001.1 Protein Homology CDS 198872 199390 . - 0 ID=cds-WP_107359652.1;Parent=gene-RM610_RS01000;Dbxref=GenBank:WP_107359652.1;Name=WP_107359652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383087.1;locus_tag=RM610_RS01000;product=GrpB family protein;protein_id=WP_107359652.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 199490 200389 . + . ID=gene-RM610_RS01005;Name=RM610_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01005;old_locus_tag=RM610_01005 NZ_JAVRJX010000001.1 Protein Homology CDS 199490 200389 . + 0 ID=cds-WP_157947451.1;Parent=gene-RM610_RS01005;Dbxref=GenBank:WP_157947451.1;Name=WP_157947451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033194.1;locus_tag=RM610_RS01005;product=EMYY motif lipoprotein;protein_id=WP_157947451.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 200534 200851 . + . ID=gene-RM610_RS01010;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=RM610_RS01010;old_locus_tag=RM610_01010 NZ_JAVRJX010000001.1 Protein Homology CDS 200534 200851 . + 0 ID=cds-WP_037572519.1;Parent=gene-RM610_RS01010;Dbxref=GenBank:WP_037572519.1;Name=WP_037572519.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=RM610_RS01010;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_037572519.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 200971 202083 . + . ID=gene-RM610_RS01015;Name=RM610_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01015;old_locus_tag=RM610_01015 NZ_JAVRJX010000001.1 Protein Homology CDS 200971 202083 . + 0 ID=cds-WP_107359654.1;Parent=gene-RM610_RS01015;Dbxref=GenBank:WP_107359654.1;Name=WP_107359654.1;Ontology_term=GO:0008152,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424507.1;locus_tag=RM610_RS01015;product=glycerate kinase;protein_id=WP_107359654.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 202134 203360 . - . ID=gene-RM610_RS01020;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=RM610_RS01020;old_locus_tag=RM610_01020 NZ_JAVRJX010000001.1 Protein Homology CDS 202134 203360 . - 0 ID=cds-WP_107376185.1;Parent=gene-RM610_RS01020;Dbxref=GenBank:WP_107376185.1;Name=WP_107376185.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898336.1;locus_tag=RM610_RS01020;product=peptidase T;protein_id=WP_107376185.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 203374 203877 . - . ID=gene-RM610_RS01025;Name=RM610_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01025;old_locus_tag=RM610_01025 NZ_JAVRJX010000001.1 Protein Homology CDS 203374 203877 . - 0 ID=cds-WP_107359656.1;Parent=gene-RM610_RS01025;Dbxref=GenBank:WP_107359656.1;Name=WP_107359656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=RM610_RS01025;product=threonine/serine exporter family protein;protein_id=WP_107359656.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 203892 204653 . - . ID=gene-RM610_RS01030;Name=RM610_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01030;old_locus_tag=RM610_01030 NZ_JAVRJX010000001.1 Protein Homology CDS 203892 204653 . - 0 ID=cds-WP_037572509.1;Parent=gene-RM610_RS01030;Dbxref=GenBank:WP_037572509.1;Name=WP_037572509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=RM610_RS01030;product=threonine/serine exporter family protein;protein_id=WP_037572509.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 205267 206337 . - . ID=gene-RM610_RS01035;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=RM610_RS01035;old_locus_tag=RM610_01035 NZ_JAVRJX010000001.1 Protein Homology CDS 205267 206337 . - 0 ID=cds-WP_107359657.1;Parent=gene-RM610_RS01035;Dbxref=GenBank:WP_107359657.1;Name=WP_107359657.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424511.1;locus_tag=RM610_RS01035;product=GGDEF domain-containing protein GdpS;protein_id=WP_107359657.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 206559 207605 . + . ID=gene-RM610_RS01040;Name=RM610_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01040;old_locus_tag=RM610_01040 NZ_JAVRJX010000001.1 Protein Homology CDS 206559 207605 . + 0 ID=cds-WP_107370101.1;Parent=gene-RM610_RS01040;Dbxref=GenBank:WP_107370101.1;Name=WP_107370101.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483912.1;locus_tag=RM610_RS01040;product=glycosyltransferase family 4 protein;protein_id=WP_107370101.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 207654 208292 . - . ID=gene-RM610_RS01045;Name=RM610_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01045;old_locus_tag=RM610_01045 NZ_JAVRJX010000001.1 Protein Homology CDS 207654 208292 . - 0 ID=cds-WP_107358704.1;Parent=gene-RM610_RS01045;Dbxref=GenBank:WP_107358704.1;Name=WP_107358704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633769.1;locus_tag=RM610_RS01045;product=YigZ family protein;protein_id=WP_107358704.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 208505 209377 . + . ID=gene-RM610_RS01050;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=RM610_RS01050;old_locus_tag=RM610_01050 NZ_JAVRJX010000001.1 Protein Homology CDS 208505 209377 . + 0 ID=cds-WP_107358703.1;Parent=gene-RM610_RS01050;Dbxref=GenBank:WP_107358703.1;Name=WP_107358703.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=RM610_RS01050;product=fatty acid kinase binding subunit FakB1;protein_id=WP_107358703.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 209528 210817 . + . ID=gene-RM610_RS01055;Name=RM610_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01055;old_locus_tag=RM610_01055 NZ_JAVRJX010000001.1 Protein Homology CDS 209528 210817 . + 0 ID=cds-WP_119523803.1;Parent=gene-RM610_RS01055;Dbxref=GenBank:WP_119523803.1;Name=WP_119523803.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508280.1;locus_tag=RM610_RS01055;product=DEAD/DEAH box helicase family protein;protein_id=WP_119523803.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 210913 211473 . + . ID=gene-RM610_RS01060;Name=RM610_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01060;old_locus_tag=RM610_01060 NZ_JAVRJX010000001.1 Protein Homology CDS 210913 211473 . + 0 ID=cds-WP_241955467.1;Parent=gene-RM610_RS01060;Dbxref=GenBank:WP_241955467.1;Name=WP_241955467.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424516.1;locus_tag=RM610_RS01060;product=ComF family protein;protein_id=WP_241955467.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 211538 212107 . + . ID=gene-RM610_RS01065;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=RM610_RS01065;old_locus_tag=RM610_01065 NZ_JAVRJX010000001.1 Protein Homology CDS 211538 212107 . + 0 ID=cds-WP_037572494.1;Parent=gene-RM610_RS01065;Dbxref=GenBank:WP_037572494.1;Name=WP_037572494.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464843.1;locus_tag=RM610_RS01065;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_037572494.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 212328 214856 . + . ID=gene-RM610_RS01070;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=RM610_RS01070;old_locus_tag=RM610_01070 NZ_JAVRJX010000001.1 Protein Homology CDS 212328 214856 . + 0 ID=cds-WP_107358701.1;Parent=gene-RM610_RS01070;Dbxref=GenBank:WP_107358701.1;Name=WP_107358701.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499326.1;locus_tag=RM610_RS01070;product=preprotein translocase subunit SecA;protein_id=WP_107358701.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 214880 215984 . + . ID=gene-RM610_RS01075;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=RM610_RS01075;old_locus_tag=RM610_01075 NZ_JAVRJX010000001.1 Protein Homology CDS 214880 214951 . + 0 ID=cds-WP_194746274.1;Parent=gene-RM610_RS01075;Dbxref=GenBank:WP_194746274.1;Name=WP_194746274.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM610_RS01075;product=peptide chain release factor 2;protein_id=WP_194746274.1;transl_table=11 NZ_JAVRJX010000001.1 Protein Homology CDS 214953 215984 . + 0 ID=cds-WP_194746274.1;Parent=gene-RM610_RS01075;Dbxref=GenBank:WP_194746274.1;Name=WP_194746274.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM610_RS01075;product=peptide chain release factor 2;protein_id=WP_194746274.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 216071 216934 . + . ID=gene-RM610_RS01080;Name=RM610_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01080;old_locus_tag=RM610_01080 NZ_JAVRJX010000001.1 Protein Homology CDS 216071 216934 . + 0 ID=cds-WP_107381074.1;Parent=gene-RM610_RS01080;Dbxref=GenBank:WP_107381074.1;Name=WP_107381074.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: protein motif:HMM:NF017102.7;locus_tag=RM610_RS01080;product=COG3942 and LysM peptidoglycan-binding domain-containing protein;protein_id=WP_107381074.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 217063 217704 . + . ID=gene-RM610_RS01085;Name=RM610_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01085;old_locus_tag=RM610_01085 NZ_JAVRJX010000001.1 Protein Homology CDS 217063 217704 . + 0 ID=cds-WP_037572489.1;Parent=gene-RM610_RS01085;Dbxref=GenBank:WP_037572489.1;Name=WP_037572489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=RM610_RS01085;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_037572489.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 217710 217946 . + . ID=gene-RM610_RS01090;Name=RM610_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01090;old_locus_tag=RM610_01090 NZ_JAVRJX010000001.1 Protein Homology CDS 217710 217946 . + 0 ID=cds-WP_107358697.1;Parent=gene-RM610_RS01090;Dbxref=GenBank:WP_107358697.1;Name=WP_107358697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=RM610_RS01090;product=CsbA family protein;protein_id=WP_107358697.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 218101 220083 . + . ID=gene-RM610_RS01095;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=RM610_RS01095;old_locus_tag=RM610_01095 NZ_JAVRJX010000001.1 Protein Homology CDS 218101 220083 . + 0 ID=cds-WP_107369202.1;Parent=gene-RM610_RS01095;Dbxref=GenBank:WP_107369202.1;Name=WP_107369202.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=RM610_RS01095;product=excinuclease ABC subunit UvrB;protein_id=WP_107369202.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 220089 222932 . + . ID=gene-RM610_RS01100;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=RM610_RS01100;old_locus_tag=RM610_01100 NZ_JAVRJX010000001.1 Protein Homology CDS 220089 222932 . + 0 ID=cds-WP_311541561.1;Parent=gene-RM610_RS01100;Dbxref=GenBank:WP_311541561.1;Name=WP_311541561.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499337.1;locus_tag=RM610_RS01100;product=excinuclease ABC subunit UvrA;protein_id=WP_311541561.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 222936 223319 . + . ID=gene-RM610_RS01105;Name=RM610_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01105;old_locus_tag=RM610_01105 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 222936 223319 . + 0 ID=cds-WP_107375585.1;Parent=gene-RM610_RS01105;Dbxref=GenBank:WP_107375585.1;Name=WP_107375585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS01105;product=hypothetical protein;protein_id=WP_107375585.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 223493 224428 . + . ID=gene-RM610_RS01110;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=RM610_RS01110;old_locus_tag=RM610_01110 NZ_JAVRJX010000001.1 Protein Homology CDS 223493 224428 . + 0 ID=cds-WP_105985853.1;Parent=gene-RM610_RS01110;Dbxref=GenBank:WP_105985853.1;Name=WP_105985853.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499338.1;locus_tag=RM610_RS01110;product=HPr(Ser) kinase/phosphatase;protein_id=WP_105985853.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 224431 225282 . + . ID=gene-RM610_RS01115;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=RM610_RS01115;old_locus_tag=RM610_01115 NZ_JAVRJX010000001.1 Protein Homology CDS 224431 225282 . + 0 ID=cds-WP_107358693.1;Parent=gene-RM610_RS01115;Dbxref=GenBank:WP_107358693.1;Name=WP_107358693.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276392.1;locus_tag=RM610_RS01115;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_107358693.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 225266 225751 . + . ID=gene-RM610_RS01120;Name=RM610_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01120;old_locus_tag=RM610_01120 NZ_JAVRJX010000001.1 Protein Homology CDS 225266 225751 . + 0 ID=cds-WP_107358692.1;Parent=gene-RM610_RS01120;Dbxref=GenBank:WP_107358692.1;Name=WP_107358692.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424528.1;locus_tag=RM610_RS01120;product=acyltransferase;protein_id=WP_107358692.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 225768 227204 . + . ID=gene-RM610_RS01125;Name=RM610_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01125;old_locus_tag=RM610_01125 NZ_JAVRJX010000001.1 Protein Homology CDS 225768 227204 . + 0 ID=cds-WP_107369198.1;Parent=gene-RM610_RS01125;Dbxref=GenBank:WP_107369198.1;Name=WP_107369198.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445953.1;locus_tag=RM610_RS01125;product=tetratricopeptide repeat protein;protein_id=WP_107369198.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 227268 228212 . + . ID=gene-RM610_RS01130;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=RM610_RS01130;old_locus_tag=RM610_01130 NZ_JAVRJX010000001.1 Protein Homology CDS 227268 228212 . + 0 ID=cds-WP_037572468.1;Parent=gene-RM610_RS01130;Dbxref=GenBank:WP_037572468.1;Name=WP_037572468.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469483.1;locus_tag=RM610_RS01130;product=thioredoxin-disulfide reductase;protein_id=WP_037572468.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 228376 229299 . + . ID=gene-RM610_RS01135;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=RM610_RS01135;old_locus_tag=RM610_01135 NZ_JAVRJX010000001.1 Protein Homology CDS 228376 229299 . + 0 ID=cds-WP_037572466.1;Parent=gene-RM610_RS01135;Dbxref=GenBank:WP_037572466.1;Name=WP_037572466.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303622.1;locus_tag=RM610_RS01135;product=RNase adapter RapZ;protein_id=WP_037572466.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 229286 230284 . + . ID=gene-RM610_RS01140;Name=mgfK;gbkey=Gene;gene=mgfK;gene_biotype=protein_coding;gene_synonym=yvcK;locus_tag=RM610_RS01140;old_locus_tag=RM610_01140 NZ_JAVRJX010000001.1 Protein Homology CDS 229286 230284 . + 0 ID=cds-WP_107358689.1;Parent=gene-RM610_RS01140;Dbxref=GenBank:WP_107358689.1;Name=WP_107358689.1;Ontology_term=GO:0008360,GO:0043743;gbkey=CDS;gene=mgfK;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=RM610_RS01140;product=gluconeogenesis morphogenetic factor MgfK;protein_id=WP_107358689.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 230344 231288 . + . ID=gene-RM610_RS01145;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=RM610_RS01145;old_locus_tag=RM610_01145 NZ_JAVRJX010000001.1 Protein Homology CDS 230344 231288 . + 0 ID=cds-WP_107358688.1;Parent=gene-RM610_RS01145;Dbxref=GenBank:WP_107358688.1;Name=WP_107358688.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=RM610_RS01145;product=DNA-binding protein WhiA;protein_id=WP_107358688.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 231328 231909 . - . ID=gene-RM610_RS01150;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=RM610_RS01150;old_locus_tag=RM610_01150 NZ_JAVRJX010000001.1 Protein Homology CDS 231328 231909 . - 0 ID=cds-WP_037572459.1;Parent=gene-RM610_RS01150;Dbxref=GenBank:WP_037572459.1;Name=WP_037572459.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424534.1;locus_tag=RM610_RS01150;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_037572459.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 232468 233229 . + . ID=gene-RM610_RS01155;Name=RM610_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01155;old_locus_tag=RM610_01155 NZ_JAVRJX010000001.1 Protein Homology CDS 232468 233229 . + 0 ID=cds-WP_311541562.1;Parent=gene-RM610_RS01155;Dbxref=GenBank:WP_311541562.1;Name=WP_311541562.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479341.1;locus_tag=RM610_RS01155;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_311541562.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 233492 233692 . + . ID=gene-RM610_RS01160;Name=RM610_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01160;old_locus_tag=RM610_01160 NZ_JAVRJX010000001.1 Protein Homology CDS 233492 233692 . + 0 ID=cds-WP_037572454.1;Parent=gene-RM610_RS01160;Dbxref=GenBank:WP_037572454.1;Name=WP_037572454.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=RM610_RS01160;product=cold shock domain-containing protein;protein_id=WP_037572454.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 233750 233953 . - . ID=gene-RM610_RS01165;Name=RM610_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01165;old_locus_tag=RM610_01165 NZ_JAVRJX010000001.1 Protein Homology CDS 233750 233953 . - 0 ID=cds-WP_037572452.1;Parent=gene-RM610_RS01165;Dbxref=GenBank:WP_037572452.1;Name=WP_037572452.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=RM610_RS01165;product=TM2 domain-containing protein;protein_id=WP_037572452.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 234126 234908 . + . ID=gene-RM610_RS01170;Name=RM610_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01170;old_locus_tag=RM610_01170 NZ_JAVRJX010000001.1 Protein Homology CDS 234126 234908 . + 0 ID=cds-WP_107375590.1;Parent=gene-RM610_RS01170;Dbxref=GenBank:WP_107375590.1;Name=WP_107375590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664081.1;locus_tag=RM610_RS01170;product=VOC family protein;protein_id=WP_107375590.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 235034 236539 . - . ID=gene-RM610_RS01175;Name=RM610_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01175;old_locus_tag=RM610_01175 NZ_JAVRJX010000001.1 Protein Homology CDS 235034 236539 . - 0 ID=cds-WP_107358632.1;Parent=gene-RM610_RS01175;Dbxref=GenBank:WP_107358632.1;Name=WP_107358632.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912174.1;locus_tag=RM610_RS01175;product=M4 family metallopeptidase;protein_id=WP_107358632.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 236742 237230 . + . ID=gene-RM610_RS01180;Name=RM610_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01180;old_locus_tag=RM610_01180 NZ_JAVRJX010000001.1 Protein Homology CDS 236742 237230 . + 0 ID=cds-WP_107375591.1;Parent=gene-RM610_RS01180;Dbxref=GenBank:WP_107375591.1;Name=WP_107375591.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469872.1;locus_tag=RM610_RS01180;product=GNAT family N-acetyltransferase;protein_id=WP_107375591.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 237327 238229 . - . ID=gene-RM610_RS01185;Name=RM610_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01185;old_locus_tag=RM610_01185 NZ_JAVRJX010000001.1 Protein Homology CDS 237327 238229 . - 0 ID=cds-WP_107358630.1;Parent=gene-RM610_RS01185;Dbxref=GenBank:WP_107358630.1;Name=WP_107358630.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165689.1;locus_tag=RM610_RS01185;product=TIGR01777 family oxidoreductase;protein_id=WP_107358630.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 238806 239510 . + . ID=gene-RM610_RS01190;Name=RM610_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01190;old_locus_tag=RM610_01190 NZ_JAVRJX010000001.1 Protein Homology CDS 238806 239510 . + 0 ID=cds-WP_311541564.1;Parent=gene-RM610_RS01190;Dbxref=GenBank:WP_311541564.1;Name=WP_311541564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165687.1;locus_tag=RM610_RS01190;product=DUF4887 domain-containing protein;protein_id=WP_311541564.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 239589 239849 . - . ID=gene-RM610_RS01195;Name=RM610_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01195;old_locus_tag=RM610_01195 NZ_JAVRJX010000001.1 Protein Homology CDS 239589 239849 . - 0 ID=cds-WP_105985865.1;Parent=gene-RM610_RS01195;Dbxref=GenBank:WP_105985865.1;Name=WP_105985865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424538.1;locus_tag=RM610_RS01195;product=hypothetical protein;protein_id=WP_105985865.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 240141 241157 . + . ID=gene-RM610_RS01200;Name=RM610_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01200;old_locus_tag=RM610_01200 NZ_JAVRJX010000001.1 Protein Homology CDS 240141 241157 . + 0 ID=cds-WP_107375593.1;Parent=gene-RM610_RS01200;Dbxref=GenBank:WP_107375593.1;Name=WP_107375593.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424539.1;locus_tag=RM610_RS01200;product=sugar-binding transcriptional regulator;protein_id=WP_107375593.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 241292 242299 . + . ID=gene-RM610_RS01205;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=RM610_RS01205;old_locus_tag=RM610_01205 NZ_JAVRJX010000001.1 Protein Homology CDS 241292 242299 . + 0 ID=cds-WP_037572432.1;Parent=gene-RM610_RS01205;Dbxref=GenBank:WP_037572432.1;Name=WP_037572432.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=RM610_RS01205;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037572432.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 242472 243662 . + . ID=gene-RM610_RS01210;Name=RM610_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01210;old_locus_tag=RM610_01210 NZ_JAVRJX010000001.1 Protein Homology CDS 242472 243662 . + 0 ID=cds-WP_105985867.1;Parent=gene-RM610_RS01210;Dbxref=GenBank:WP_105985867.1;Name=WP_105985867.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=RM610_RS01210;product=phosphoglycerate kinase;protein_id=WP_105985867.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 243735 244496 . + . ID=gene-RM610_RS01215;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=RM610_RS01215;old_locus_tag=RM610_01215 NZ_JAVRJX010000001.1 Protein Homology CDS 243735 244496 . + 0 ID=cds-WP_107358626.1;Parent=gene-RM610_RS01215;Dbxref=GenBank:WP_107358626.1;Name=WP_107358626.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=RM610_RS01215;product=triose-phosphate isomerase;protein_id=WP_107358626.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 244498 246018 . + . ID=gene-RM610_RS01220;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=RM610_RS01220;old_locus_tag=RM610_01220 NZ_JAVRJX010000001.1 Protein Homology CDS 244498 246018 . + 0 ID=cds-WP_107381213.1;Parent=gene-RM610_RS01220;Dbxref=GenBank:WP_107381213.1;Name=WP_107381213.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=RM610_RS01220;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_107381213.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 246177 247481 . + . ID=gene-RM610_RS01225;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=RM610_RS01225;old_locus_tag=RM610_01225 NZ_JAVRJX010000001.1 Protein Homology CDS 246177 247481 . + 0 ID=cds-WP_037572424.1;Parent=gene-RM610_RS01225;Dbxref=GenBank:WP_037572424.1;Name=WP_037572424.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=RM610_RS01225;product=surface-displayed alpha-enolase;protein_id=WP_037572424.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 247634 248104 . + . ID=gene-RM610_RS01230;Name=RM610_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01230;old_locus_tag=RM610_01230 NZ_JAVRJX010000001.1 Protein Homology CDS 247634 248104 . + 0 ID=cds-WP_228512610.1;Parent=gene-RM610_RS01230;Dbxref=GenBank:WP_228512610.1;Name=WP_228512610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=RM610_RS01230;product=hypothetical protein;protein_id=WP_228512610.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 248174 248407 . + . ID=gene-RM610_RS01235;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=RM610_RS01235;old_locus_tag=RM610_01235 NZ_JAVRJX010000001.1 Protein Homology CDS 248174 248407 . + 0 ID=cds-WP_037566707.1;Parent=gene-RM610_RS01235;Dbxref=GenBank:WP_037566707.1;Name=WP_037566707.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=RM610_RS01235;product=preprotein translocase subunit SecG;protein_id=WP_037566707.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 248561 249301 . + . ID=gene-RM610_RS01240;Name=RM610_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01240;old_locus_tag=RM610_01240 NZ_JAVRJX010000001.1 Protein Homology CDS 248561 249301 . + 0 ID=cds-WP_037572421.1;Parent=gene-RM610_RS01240;Dbxref=GenBank:WP_037572421.1;Name=WP_037572421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=RM610_RS01240;product=alpha/beta hydrolase;protein_id=WP_037572421.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 249340 251694 . + . ID=gene-RM610_RS01245;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=RM610_RS01245;old_locus_tag=RM610_01245 NZ_JAVRJX010000001.1 Protein Homology CDS 249340 251694 . + 0 ID=cds-WP_107381212.1;Parent=gene-RM610_RS01245;Dbxref=GenBank:WP_107381212.1;Name=WP_107381212.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=RM610_RS01245;product=ribonuclease R;protein_id=WP_107381212.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 251711 252175 . + . ID=gene-RM610_RS01250;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=RM610_RS01250;old_locus_tag=RM610_01250 NZ_JAVRJX010000001.1 Protein Homology CDS 251711 252175 . + 0 ID=cds-WP_107358622.1;Parent=gene-RM610_RS01250;Dbxref=GenBank:WP_107358622.1;Name=WP_107358622.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=RM610_RS01250;product=SsrA-binding protein SmpB;protein_id=WP_107358622.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 252248 252606 . + . ID=gene-RM610_RS01255;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=RM610_RS01255;old_locus_tag=RM610_01255 NZ_JAVRJX010000001.1 cmsearch tmRNA 252248 252606 . + . ID=rna-RM610_RS01255;Parent=gene-RM610_RS01255;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS01255;product=transfer-messenger RNA NZ_JAVRJX010000001.1 cmsearch exon 252248 252606 . + . ID=exon-RM610_RS01255-1;Parent=rna-RM610_RS01255;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS01255;product=transfer-messenger RNA NZ_JAVRJX010000001.1 RefSeq gene 252970 253152 . - . ID=gene-RM610_RS01260;Name=RM610_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01260;old_locus_tag=RM610_01260 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 252970 253152 . - 0 ID=cds-WP_107358621.1;Parent=gene-RM610_RS01260;Dbxref=GenBank:WP_107358621.1;Name=WP_107358621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS01260;product=hypothetical protein;protein_id=WP_107358621.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 253414 254604 . + . ID=gene-RM610_RS01265;Name=RM610_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01265;old_locus_tag=RM610_01265 NZ_JAVRJX010000001.1 Protein Homology CDS 253414 254604 . + 0 ID=cds-WP_107364352.1;Parent=gene-RM610_RS01265;Dbxref=GenBank:WP_107364352.1;Name=WP_107364352.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.7;locus_tag=RM610_RS01265;product=cation:proton antiporter;protein_id=WP_107364352.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 254718 254900 . + . ID=gene-RM610_RS01270;Name=RM610_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01270;old_locus_tag=RM610_01270 NZ_JAVRJX010000001.1 Protein Homology CDS 254718 254900 . + 0 ID=cds-WP_107358619.1;Parent=gene-RM610_RS01270;Dbxref=GenBank:WP_107358619.1;Name=WP_107358619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724656.1;locus_tag=RM610_RS01270;product=CsbD family protein;protein_id=WP_107358619.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 255143 255799 . + . ID=gene-RM610_RS01275;Name=RM610_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01275;old_locus_tag=RM610_01275 NZ_JAVRJX010000001.1 Protein Homology CDS 255143 255799 . + 0 ID=cds-WP_107358618.1;Parent=gene-RM610_RS01275;Dbxref=GenBank:WP_107358618.1;Name=WP_107358618.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656193.1;locus_tag=RM610_RS01275;product=Crp/Fnr family transcriptional regulator;protein_id=WP_107358618.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 255876 257786 . + . ID=gene-RM610_RS01280;Name=RM610_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01280;old_locus_tag=RM610_01280 NZ_JAVRJX010000001.1 Protein Homology CDS 255876 257786 . + 0 ID=cds-WP_107369186.1;Parent=gene-RM610_RS01280;Dbxref=GenBank:WP_107369186.1;Name=WP_107369186.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479531.1;locus_tag=RM610_RS01280;product=heavy metal translocating P-type ATPase;protein_id=WP_107369186.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 257809 258024 . + . ID=gene-RM610_RS01285;Name=RM610_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01285;old_locus_tag=RM610_01285 NZ_JAVRJX010000001.1 Protein Homology CDS 257809 258024 . + 0 ID=cds-WP_105985878.1;Parent=gene-RM610_RS01285;Dbxref=GenBank:WP_105985878.1;Name=WP_105985878.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209103.1;locus_tag=RM610_RS01285;product=heavy-metal-associated domain-containing protein;protein_id=WP_105985878.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 258150 259622 . - . ID=gene-RM610_RS01290;Name=RM610_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01290;old_locus_tag=RM610_01290 NZ_JAVRJX010000001.1 Protein Homology CDS 258150 259622 . - 0 ID=cds-WP_107375599.1;Parent=gene-RM610_RS01290;Dbxref=GenBank:WP_107375599.1;Name=WP_107375599.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364574.1;locus_tag=RM610_RS01290;product=MFS transporter;protein_id=WP_107375599.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 259720 260091 . - . ID=gene-RM610_RS01295;Name=RM610_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01295;old_locus_tag=RM610_01295 NZ_JAVRJX010000001.1 Protein Homology CDS 259720 260091 . - 0 ID=cds-WP_107375600.1;Parent=gene-RM610_RS01295;Dbxref=GenBank:WP_107375600.1;Name=WP_107375600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=RM610_RS01295;product=DUF1722 domain-containing protein;protein_id=WP_107375600.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 260100 260603 . - . ID=gene-RM610_RS01300;Name=RM610_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01300;old_locus_tag=RM610_01300 NZ_JAVRJX010000001.1 Protein Homology CDS 260100 260603 . - 0 ID=cds-WP_107358615.1;Parent=gene-RM610_RS01300;Dbxref=GenBank:WP_107358615.1;Name=WP_107358615.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424562.1;locus_tag=RM610_RS01300;product=GNAT family N-acetyltransferase;protein_id=WP_107358615.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 260789 261208 . - . ID=gene-RM610_RS01305;Name=RM610_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01305;old_locus_tag=RM610_01305 NZ_JAVRJX010000001.1 Protein Homology CDS 260789 261208 . - 0 ID=cds-WP_037572388.1;Parent=gene-RM610_RS01305;Dbxref=GenBank:WP_037572388.1;Name=WP_037572388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503427.1;locus_tag=RM610_RS01305;product=organic hydroperoxide resistance protein;protein_id=WP_037572388.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 261335 262078 . + . ID=gene-RM610_RS01310;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=RM610_RS01310;old_locus_tag=RM610_01310 NZ_JAVRJX010000001.1 Protein Homology CDS 261335 262078 . + 0 ID=cds-WP_311541565.1;Parent=gene-RM610_RS01310;Dbxref=GenBank:WP_311541565.1;Name=WP_311541565.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=RM610_RS01310;product=type I 3-dehydroquinate dehydratase;protein_id=WP_311541565.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 262113 262658 . + . ID=gene-RM610_RS01315;Name=RM610_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01315;old_locus_tag=RM610_01315 NZ_JAVRJX010000001.1 Protein Homology CDS 262113 262658 . + 0 ID=cds-WP_311541566.1;Parent=gene-RM610_RS01315;Dbxref=GenBank:WP_311541566.1;Name=WP_311541566.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424567.1;locus_tag=RM610_RS01315;product=nitroreductase family protein;protein_id=WP_311541566.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 262744 263064 . - . ID=gene-RM610_RS01320;Name=RM610_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01320;old_locus_tag=RM610_01320 NZ_JAVRJX010000001.1 Protein Homology CDS 262744 263064 . - 0 ID=cds-WP_105985885.1;Parent=gene-RM610_RS01320;Dbxref=GenBank:WP_105985885.1;Name=WP_105985885.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147954.1;locus_tag=RM610_RS01320;product=thioredoxin family protein;protein_id=WP_105985885.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 263234 263587 . + . ID=gene-RM610_RS01325;Name=RM610_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01325;old_locus_tag=RM610_01325 NZ_JAVRJX010000001.1 Protein Homology CDS 263234 263587 . + 0 ID=cds-WP_107358612.1;Parent=gene-RM610_RS01325;Dbxref=GenBank:WP_107358612.1;Name=WP_107358612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450858.1;locus_tag=RM610_RS01325;product=arsenate reductase family protein;protein_id=WP_107358612.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 263658 264038 . + . ID=gene-RM610_RS01330;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=RM610_RS01330;old_locus_tag=RM610_01330 NZ_JAVRJX010000001.1 Protein Homology CDS 263658 264038 . + 0 ID=cds-WP_105985886.1;Parent=gene-RM610_RS01330;Dbxref=GenBank:WP_105985886.1;Name=WP_105985886.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=RM610_RS01330;product=glycine cleavage system protein GcvH;protein_id=WP_105985886.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 264121 264516 . + . ID=gene-RM610_RS01335;Name=RM610_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01335;old_locus_tag=RM610_01335 NZ_JAVRJX010000001.1 Protein Homology CDS 264121 264516 . + 0 ID=cds-WP_107381471.1;Parent=gene-RM610_RS01335;Dbxref=GenBank:WP_107381471.1;Name=WP_107381471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=RM610_RS01335;product=toprim domain-containing protein;protein_id=WP_107381471.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 264482 264802 . + . ID=gene-RM610_RS01340;Name=RM610_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01340;old_locus_tag=RM610_01340 NZ_JAVRJX010000001.1 Protein Homology CDS 264482 264802 . + 0 ID=cds-WP_311541568.1;Parent=gene-RM610_RS01340;Dbxref=GenBank:WP_311541568.1;Name=WP_311541568.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=RM610_RS01340;product=thioredoxin family protein;protein_id=WP_311541568.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 264842 264948 . + . ID=id-NZ_JAVRJX010000001.1:264842..264948;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 265041 266069 . + . ID=gene-RM610_RS01345;Name=RM610_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01345;old_locus_tag=RM610_01345 NZ_JAVRJX010000001.1 Protein Homology CDS 265041 266069 . + 0 ID=cds-WP_107381470.1;Parent=gene-RM610_RS01345;Dbxref=GenBank:WP_107381470.1;Name=WP_107381470.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082631.1;locus_tag=RM610_RS01345;product=methionine ABC transporter ATP-binding protein;protein_id=WP_107381470.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 266062 266757 . + . ID=gene-RM610_RS01350;Name=RM610_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01350;old_locus_tag=RM610_01350 NZ_JAVRJX010000001.1 Protein Homology CDS 266062 266757 . + 0 ID=cds-WP_037572375.1;Parent=gene-RM610_RS01350;Dbxref=GenBank:WP_037572375.1;Name=WP_037572375.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=RM610_RS01350;product=methionine ABC transporter permease;protein_id=WP_037572375.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 266782 267612 . + . ID=gene-RM610_RS01355;Name=RM610_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01355;old_locus_tag=RM610_01355 NZ_JAVRJX010000001.1 Protein Homology CDS 266782 267612 . + 0 ID=cds-WP_311541569.1;Parent=gene-RM610_RS01355;Dbxref=GenBank:WP_311541569.1;Name=WP_311541569.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614450.1;locus_tag=RM610_RS01355;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_311541569.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 267909 268760 . - . ID=gene-RM610_RS01360;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=RM610_RS01360;old_locus_tag=RM610_01360 NZ_JAVRJX010000001.1 Protein Homology CDS 267909 268760 . - 0 ID=cds-WP_194746249.1;Parent=gene-RM610_RS01360;Dbxref=GenBank:WP_194746249.1;Name=WP_194746249.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424577.1;locus_tag=RM610_RS01360;product=polyprenyl-phosphate transporter PopT;protein_id=WP_194746249.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 269064 269834 . + . ID=gene-RM610_RS01365;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=RM610_RS01365;old_locus_tag=RM610_01365 NZ_JAVRJX010000001.1 Protein Homology CDS 269064 269834 . + 0 ID=cds-WP_037572369.1;Parent=gene-RM610_RS01365;Dbxref=GenBank:WP_037572369.1;Name=WP_037572369.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=RM610_RS01365;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_037572369.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 269856 271163 . + . ID=gene-RM610_RS01370;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=RM610_RS01370;old_locus_tag=RM610_01370 NZ_JAVRJX010000001.1 Protein Homology CDS 269856 271163 . + 0 ID=cds-WP_107381233.1;Parent=gene-RM610_RS01370;Dbxref=GenBank:WP_107381233.1;Name=WP_107381233.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=RM610_RS01370;product=Fe-S cluster assembly protein SufD;protein_id=WP_107381233.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 271278 272519 . + . ID=gene-RM610_RS01375;Name=RM610_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01375;old_locus_tag=RM610_01375 NZ_JAVRJX010000001.1 Protein Homology CDS 271278 272519 . + 0 ID=cds-WP_107358706.1;Parent=gene-RM610_RS01375;Dbxref=GenBank:WP_107358706.1;Name=WP_107358706.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424580.1;locus_tag=RM610_RS01375;product=cysteine desulfurase;protein_id=WP_107358706.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 272509 272958 . + . ID=gene-RM610_RS01380;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=RM610_RS01380;old_locus_tag=RM610_01380 NZ_JAVRJX010000001.1 Protein Homology CDS 272509 272958 . + 0 ID=cds-WP_311541570.1;Parent=gene-RM610_RS01380;Dbxref=GenBank:WP_311541570.1;Name=WP_311541570.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=RM610_RS01380;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_311541570.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 273033 274430 . + . ID=gene-RM610_RS01385;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=RM610_RS01385;old_locus_tag=RM610_01385 NZ_JAVRJX010000001.1 Protein Homology CDS 273033 274430 . + 0 ID=cds-WP_107358605.1;Parent=gene-RM610_RS01385;Dbxref=GenBank:WP_107358605.1;Name=WP_107358605.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=RM610_RS01385;product=Fe-S cluster assembly protein SufB;protein_id=WP_107358605.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 274697 275692 . + . ID=gene-RM610_RS01390;Name=RM610_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01390;old_locus_tag=RM610_01390 NZ_JAVRJX010000001.1 Protein Homology CDS 274697 275692 . + 0 ID=cds-WP_037572362.1;Parent=gene-RM610_RS01390;Dbxref=GenBank:WP_037572362.1;Name=WP_037572362.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=RM610_RS01390;product=hemolysin family protein;protein_id=WP_037572362.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 275834 276910 . + . ID=gene-RM610_RS01395;Name=RM610_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01395;old_locus_tag=RM610_01395 NZ_JAVRJX010000001.1 Protein Homology CDS 275834 276910 . + 0 ID=cds-WP_311541571.1;Parent=gene-RM610_RS01395;Dbxref=GenBank:WP_311541571.1;Name=WP_311541571.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166997.1;locus_tag=RM610_RS01395;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_311541571.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 277002 277697 . - . ID=gene-RM610_RS01400;Name=RM610_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01400;old_locus_tag=RM610_01400 NZ_JAVRJX010000001.1 Protein Homology CDS 277002 277697 . - 0 ID=cds-WP_311541572.1;Parent=gene-RM610_RS01400;Dbxref=GenBank:WP_311541572.1;Name=WP_311541572.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480031.1;locus_tag=RM610_RS01400;product=alpha/beta hydrolase;protein_id=WP_311541572.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 277821 278669 . + . ID=gene-RM610_RS01405;Name=RM610_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01405;old_locus_tag=RM610_01405 NZ_JAVRJX010000001.1 Protein Homology CDS 277821 278669 . + 0 ID=cds-WP_311541573.1;Parent=gene-RM610_RS01405;Dbxref=GenBank:WP_311541573.1;Name=WP_311541573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=RM610_RS01405;product=DUF72 domain-containing protein;protein_id=WP_311541573.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 278685 279509 . + . ID=gene-RM610_RS01410;Name=RM610_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01410;old_locus_tag=RM610_01410 NZ_JAVRJX010000001.1 Protein Homology CDS 278685 279509 . + 0 ID=cds-WP_107358601.1;Parent=gene-RM610_RS01410;Dbxref=GenBank:WP_107358601.1;Name=WP_107358601.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469689.1;locus_tag=RM610_RS01410;product=sulfite exporter TauE/SafE family protein;protein_id=WP_107358601.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 279522 280841 . + . ID=gene-RM610_RS01415;Name=RM610_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01415;old_locus_tag=RM610_01415 NZ_JAVRJX010000001.1 Protein Homology CDS 279522 280841 . + 0 ID=cds-WP_107381236.1;Parent=gene-RM610_RS01415;Dbxref=GenBank:WP_107381236.1;Name=WP_107381236.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424590.1;locus_tag=RM610_RS01415;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_107381236.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 280925 281842 . + . ID=gene-RM610_RS01420;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=RM610_RS01420;old_locus_tag=RM610_01420 NZ_JAVRJX010000001.1 Protein Homology CDS 280925 281842 . + 0 ID=cds-WP_037572352.1;Parent=gene-RM610_RS01420;Dbxref=GenBank:WP_037572352.1;Name=WP_037572352.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448197.1;locus_tag=RM610_RS01420;product=lipoyl synthase;protein_id=WP_037572352.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 281860 282225 . + . ID=gene-RM610_RS01425;Name=RM610_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01425;old_locus_tag=RM610_01425 NZ_JAVRJX010000001.1 Protein Homology CDS 281860 282225 . + 0 ID=cds-WP_107358599.1;Parent=gene-RM610_RS01425;Dbxref=GenBank:WP_107358599.1;Name=WP_107358599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=RM610_RS01425;product=YutD family protein;protein_id=WP_107358599.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 282407 283225 . + . ID=gene-RM610_RS01430;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM610_RS01430;old_locus_tag=RM610_01430 NZ_JAVRJX010000001.1 Protein Homology CDS 282407 283225 . + 0 ID=cds-WP_311541574.1;Parent=gene-RM610_RS01430;Dbxref=GenBank:WP_311541574.1;Name=WP_311541574.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: protein motif:HMM:NF014186.8;locus_tag=RM610_RS01430;product=membrane protein insertase YidC;protein_id=WP_311541574.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 283750 284016 . - . ID=gene-RM610_RS01435;Name=RM610_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01435;old_locus_tag=RM610_01435 NZ_JAVRJX010000001.1 Protein Homology CDS 283750 284016 . - 0 ID=cds-WP_103158895.1;Parent=gene-RM610_RS01435;Dbxref=GenBank:WP_103158895.1;Name=WP_103158895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=RM610_RS01435;product=DUF3055 domain-containing protein;protein_id=WP_103158895.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 284115 284552 . + . ID=gene-RM610_RS01440;Name=RM610_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01440;old_locus_tag=RM610_01440 NZ_JAVRJX010000001.1 Protein Homology CDS 284115 284552 . + 0 ID=cds-WP_105985898.1;Parent=gene-RM610_RS01440;Dbxref=GenBank:WP_105985898.1;Name=WP_105985898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424594.1;locus_tag=RM610_RS01440;product=DUF86 domain-containing protein;protein_id=WP_105985898.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 284549 285346 . + . ID=gene-RM610_RS01445;Name=nucF;gbkey=Gene;gene=nucF;gene_biotype=protein_coding;gene_synonym=yutF;locus_tag=RM610_RS01445;old_locus_tag=RM610_01445 NZ_JAVRJX010000001.1 Protein Homology CDS 284549 285346 . + 0 ID=cds-WP_107358596.1;Parent=gene-RM610_RS01445;Dbxref=GenBank:WP_107358596.1;Name=WP_107358596.1;Ontology_term=GO:0008253,GO:0016791,GO:0046872;gbkey=CDS;gene=nucF;go_function=5'-nucleotidase activity|0008253||IEA,phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424595.1;locus_tag=RM610_RS01445;product=5' nucleotidase NucF;protein_id=WP_107358596.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 285339 286304 . + . ID=gene-RM610_RS01450;Name=RM610_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01450;old_locus_tag=RM610_01450 NZ_JAVRJX010000001.1 Protein Homology CDS 285339 286304 . + 0 ID=cds-WP_107358595.1;Parent=gene-RM610_RS01450;Dbxref=GenBank:WP_107358595.1;Name=WP_107358595.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=RM610_RS01450;product=2-hydroxyacid dehydrogenase;protein_id=WP_107358595.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 286755 286886 . + . ID=gene-RM610_RS01455;Name=RM610_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01455;old_locus_tag=RM610_01455 NZ_JAVRJX010000001.1 Protein Homology CDS 286755 286886 . + 0 ID=cds-WP_084275967.1;Parent=gene-RM610_RS01455;Dbxref=GenBank:WP_084275967.1;Name=WP_084275967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=RM610_RS01455;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_084275967.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 286905 288359 . + . ID=gene-RM610_RS01460;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=RM610_RS01460;old_locus_tag=RM610_01460 NZ_JAVRJX010000001.1 Protein Homology CDS 286905 288359 . + 0 ID=cds-WP_311541575.1;Parent=gene-RM610_RS01460;Dbxref=GenBank:WP_311541575.1;Name=WP_311541575.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614336.1;locus_tag=RM610_RS01460;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_311541575.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 288356 289576 . + . ID=gene-RM610_RS01465;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=RM610_RS01465;old_locus_tag=RM610_01465 NZ_JAVRJX010000001.1 Protein Homology CDS 288356 289576 . + 0 ID=cds-WP_311541576.1;Parent=gene-RM610_RS01465;Dbxref=GenBank:WP_311541576.1;Name=WP_311541576.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=RM610_RS01465;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_311541576.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 289593 289829 . + . ID=gene-RM610_RS01470;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=RM610_RS01470;old_locus_tag=RM610_01470 NZ_JAVRJX010000001.1 Protein Homology CDS 289593 289829 . + 0 ID=cds-WP_103158897.1;Parent=gene-RM610_RS01470;Dbxref=GenBank:WP_103158897.1;Name=WP_103158897.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=RM610_RS01470;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WP_103158897.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 289826 290974 . + . ID=gene-RM610_RS01475;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=RM610_RS01475;old_locus_tag=RM610_01475 NZ_JAVRJX010000001.1 Protein Homology CDS 289826 290974 . + 0 ID=cds-WP_107519311.1;Parent=gene-RM610_RS01475;Dbxref=GenBank:WP_107519311.1;Name=WP_107519311.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424679.1;locus_tag=RM610_RS01475;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_107519311.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 291118 291360 . - . ID=gene-RM610_RS01480;Name=RM610_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01480;old_locus_tag=RM610_01480 NZ_JAVRJX010000001.1 Protein Homology CDS 291118 291360 . - 0 ID=cds-WP_037572314.1;Parent=gene-RM610_RS01480;Dbxref=GenBank:WP_037572314.1;Name=WP_037572314.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=RM610_RS01480;product=NifU family protein;protein_id=WP_037572314.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 291465 291785 . + . ID=gene-RM610_RS01485;Name=RM610_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01485;old_locus_tag=RM610_01485 NZ_JAVRJX010000001.1 Protein Homology CDS 291465 291785 . + 0 ID=cds-WP_107369125.1;Parent=gene-RM610_RS01485;Dbxref=GenBank:WP_107369125.1;Name=WP_107369125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448149.1;locus_tag=RM610_RS01485;product=YuzD family protein;protein_id=WP_107369125.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 292127 293191 . - . ID=gene-RM610_RS01490;Name=RM610_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01490;old_locus_tag=RM610_01490 NZ_JAVRJX010000001.1 Protein Homology CDS 292127 293191 . - 0 ID=cds-WP_037572307.1;Parent=gene-RM610_RS01490;Dbxref=GenBank:WP_037572307.1;Name=WP_037572307.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794016.1;locus_tag=RM610_RS01490;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572307.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 293487 293723 . + . ID=gene-RM610_RS01495;Name=RM610_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01495;old_locus_tag=RM610_01495 NZ_JAVRJX010000001.1 Protein Homology CDS 293487 293723 . + 0 ID=cds-WP_103158898.1;Parent=gene-RM610_RS01495;Dbxref=GenBank:WP_103158898.1;Name=WP_103158898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499429.1;locus_tag=RM610_RS01495;product=YuzB family protein;protein_id=WP_103158898.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 293737 294096 . + . ID=gene-RM610_RS01500;Name=RM610_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01500;old_locus_tag=RM610_01500 NZ_JAVRJX010000001.1 Protein Homology CDS 293737 294096 . + 0 ID=cds-WP_107358591.1;Parent=gene-RM610_RS01500;Dbxref=GenBank:WP_107358591.1;Name=WP_107358591.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=RM610_RS01500;product=HesB/IscA family protein;protein_id=WP_107358591.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 294344 295546 . + . ID=gene-RM610_RS01505;Name=RM610_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01505;old_locus_tag=RM610_01505 NZ_JAVRJX010000001.1 Protein Homology CDS 294344 295546 . + 0 ID=cds-WP_311541577.1;Parent=gene-RM610_RS01505;Dbxref=GenBank:WP_311541577.1;Name=WP_311541577.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=RM610_RS01505;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311541577.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 295628 297106 . + . ID=gene-RM610_RS01510;Name=RM610_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01510;old_locus_tag=RM610_01510 NZ_JAVRJX010000001.1 Protein Homology CDS 295628 297106 . + 0 ID=cds-WP_311541578.1;Parent=gene-RM610_RS01510;Dbxref=GenBank:WP_311541578.1;Name=WP_311541578.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383447.1;locus_tag=RM610_RS01510;product=M17 family metallopeptidase;protein_id=WP_311541578.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 297242 298555 . + . ID=gene-RM610_RS01515;Name=RM610_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01515;old_locus_tag=RM610_01515 NZ_JAVRJX010000001.1 Protein Homology CDS 297242 298555 . + 0 ID=cds-WP_311541579.1;Parent=gene-RM610_RS01515;Dbxref=GenBank:WP_311541579.1;Name=WP_311541579.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=RM610_RS01515;product=Na+/H+ antiporter family protein;protein_id=WP_311541579.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 298577 298951 . + . ID=gene-RM610_RS01520;Name=RM610_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01520;old_locus_tag=RM610_01520 NZ_JAVRJX010000001.1 Protein Homology CDS 298577 298951 . + 0 ID=cds-WP_107369123.1;Parent=gene-RM610_RS01520;Dbxref=GenBank:WP_107369123.1;Name=WP_107369123.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467045.1;locus_tag=RM610_RS01520;product=PaaI family thioesterase;protein_id=WP_107369123.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 299014 299370 . - . ID=gene-RM610_RS01525;Name=RM610_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01525;old_locus_tag=RM610_01525 NZ_JAVRJX010000001.1 Protein Homology CDS 299014 299370 . - 0 ID=cds-WP_037572287.1;Parent=gene-RM610_RS01525;Dbxref=GenBank:WP_037572287.1;Name=WP_037572287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=RM610_RS01525;product=Na+/H+ antiporter subunit G1;protein_id=WP_037572287.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 299348 299641 . - . ID=gene-RM610_RS01530;Name=RM610_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01530;old_locus_tag=RM610_01530 NZ_JAVRJX010000001.1 Protein Homology CDS 299348 299641 . - 0 ID=cds-WP_107358585.1;Parent=gene-RM610_RS01530;Dbxref=GenBank:WP_107358585.1;Name=WP_107358585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=RM610_RS01530;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_107358585.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 299641 300120 . - . ID=gene-RM610_RS01535;Name=RM610_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01535;old_locus_tag=RM610_01535 NZ_JAVRJX010000001.1 Protein Homology CDS 299641 300120 . - 0 ID=cds-WP_105985908.1;Parent=gene-RM610_RS01535;Dbxref=GenBank:WP_105985908.1;Name=WP_105985908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=RM610_RS01535;product=Na+/H+ antiporter subunit E;protein_id=WP_105985908.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 300121 301620 . - . ID=gene-RM610_RS01540;Name=RM610_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01540;old_locus_tag=RM610_01540 NZ_JAVRJX010000001.1 Protein Homology CDS 300121 301620 . - 0 ID=cds-WP_107358584.1;Parent=gene-RM610_RS01540;Dbxref=GenBank:WP_107358584.1;Name=WP_107358584.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722348.1;locus_tag=RM610_RS01540;product=Na+/H+ antiporter subunit D;protein_id=WP_107358584.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 301610 301957 . - . ID=gene-RM610_RS01545;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=RM610_RS01545;old_locus_tag=RM610_01545 NZ_JAVRJX010000001.1 Protein Homology CDS 301610 301957 . - 0 ID=cds-WP_037572280.1;Parent=gene-RM610_RS01545;Dbxref=GenBank:WP_037572280.1;Name=WP_037572280.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614416.1;locus_tag=RM610_RS01545;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_037572280.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 301957 302385 . - . ID=gene-RM610_RS01550;Name=RM610_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01550;old_locus_tag=RM610_01550 NZ_JAVRJX010000001.1 Protein Homology CDS 301957 302385 . - 0 ID=cds-WP_037572278.1;Parent=gene-RM610_RS01550;Dbxref=GenBank:WP_037572278.1;Name=WP_037572278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467267.1;locus_tag=RM610_RS01550;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_037572278.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 302366 304783 . - . ID=gene-RM610_RS01555;Name=RM610_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01555;old_locus_tag=RM610_01555 NZ_JAVRJX010000001.1 Protein Homology CDS 302366 304783 . - 0 ID=cds-WP_107358583.1;Parent=gene-RM610_RS01555;Dbxref=GenBank:WP_107358583.1;Name=WP_107358583.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=RM610_RS01555;product=Na+/H+ antiporter subunit A;protein_id=WP_107358583.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 304925 305305 . - . ID=gene-RM610_RS01560;Name=RM610_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01560;old_locus_tag=RM610_01560 NZ_JAVRJX010000001.1 Protein Homology CDS 304925 305305 . - 0 ID=cds-WP_107375653.1;Parent=gene-RM610_RS01560;Dbxref=GenBank:WP_107375653.1;Name=WP_107375653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831990.1;locus_tag=RM610_RS01560;product=kinase-associated lipoprotein B;protein_id=WP_107375653.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 305378 305983 . + . ID=gene-RM610_RS01565;Name=RM610_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01565;old_locus_tag=RM610_01565 NZ_JAVRJX010000001.1 Protein Homology CDS 305378 305983 . + 0 ID=cds-WP_037572270.1;Parent=gene-RM610_RS01565;Dbxref=GenBank:WP_037572270.1;Name=WP_037572270.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276264.1;locus_tag=RM610_RS01565;product=peptidylprolyl isomerase;protein_id=WP_037572270.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 306017 306280 . + . ID=gene-RM610_RS01570;Name=RM610_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01570;old_locus_tag=RM610_01570 NZ_JAVRJX010000001.1 Protein Homology CDS 306017 306280 . + 0 ID=cds-WP_107375652.1;Parent=gene-RM610_RS01570;Dbxref=GenBank:WP_107375652.1;Name=WP_107375652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=RM610_RS01570;product=DUF1871 family protein;protein_id=WP_107375652.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 306694 307884 . + . ID=gene-RM610_RS01575;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=RM610_RS01575;old_locus_tag=RM610_01575 NZ_JAVRJX010000001.1 Protein Homology CDS 306694 307884 . + 0 ID=cds-WP_107375651.1;Parent=gene-RM610_RS01575;Dbxref=GenBank:WP_107375651.1;Name=WP_107375651.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383466.1;locus_tag=RM610_RS01575;product=formamidase;protein_id=WP_107375651.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 307884 308153 . + . ID=gene-RM610_RS01580;Name=RM610_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01580;old_locus_tag=RM610_01580 NZ_JAVRJX010000001.1 Protein Homology CDS 307884 308153 . + 0 ID=cds-WP_037572261.1;Parent=gene-RM610_RS01580;Dbxref=GenBank:WP_037572261.1;Name=WP_037572261.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=RM610_RS01580;product=FmdB family zinc ribbon protein;protein_id=WP_037572261.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 308319 308705 . + . ID=gene-RM610_RS01585;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=RM610_RS01585;old_locus_tag=RM610_01585 NZ_JAVRJX010000001.1 Protein Homology CDS 308319 308705 . + 0 ID=cds-WP_037572258.1;Parent=gene-RM610_RS01585;Dbxref=GenBank:WP_037572258.1;Name=WP_037572258.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=RM610_RS01585;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_037572258.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 309037 310581 . + . ID=gene-RM610_RS01590;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=RM610_RS01590;old_locus_tag=RM610_01590 NZ_JAVRJX010000001.1 Protein Homology CDS 309037 310581 . + 0 ID=cds-WP_037572253.1;Parent=gene-RM610_RS01590;Dbxref=GenBank:WP_037572253.1;Name=WP_037572253.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=RM610_RS01590;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_037572253.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 310804 312003 . + . ID=gene-RM610_RS01595;Name=RM610_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01595;old_locus_tag=RM610_01595 NZ_JAVRJX010000001.1 Protein Homology CDS 310804 312003 . + 0 ID=cds-WP_107358578.1;Parent=gene-RM610_RS01595;Dbxref=GenBank:WP_107358578.1;Name=WP_107358578.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424621.1;locus_tag=RM610_RS01595;product=ornithine--oxo-acid transaminase;protein_id=WP_107358578.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 312164 313408 . + . ID=gene-RM610_RS01600;Name=RM610_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01600;old_locus_tag=RM610_01600 NZ_JAVRJX010000001.1 Protein Homology CDS 312164 313408 . + 0 ID=cds-WP_107358577.1;Parent=gene-RM610_RS01600;Dbxref=GenBank:WP_107358577.1;Name=WP_107358577.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=RM610_RS01600;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_107358577.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 313462 314397 . - . ID=gene-RM610_RS01605;Name=RM610_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01605;old_locus_tag=RM610_01605 NZ_JAVRJX010000001.1 Protein Homology CDS 313462 314397 . - 0 ID=cds-WP_107358576.1;Parent=gene-RM610_RS01605;Dbxref=GenBank:WP_107358576.1;Name=WP_107358576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175845.1;locus_tag=RM610_RS01605;product=glycerophosphodiester phosphodiesterase;protein_id=WP_107358576.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 314551 315924 . - . ID=gene-RM610_RS01610;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=RM610_RS01610;old_locus_tag=RM610_01610 NZ_JAVRJX010000001.1 Protein Homology CDS 314551 315924 . - 0 ID=cds-WP_311541580.1;Parent=gene-RM610_RS01610;Dbxref=GenBank:WP_311541580.1;Name=WP_311541580.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499451.1;locus_tag=RM610_RS01610;product=argininosuccinate lyase;protein_id=WP_311541580.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 315917 317122 . - . ID=gene-RM610_RS01615;Name=RM610_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01615;old_locus_tag=RM610_01615 NZ_JAVRJX010000001.1 Protein Homology CDS 315917 317122 . - 0 ID=cds-WP_105996717.1;Parent=gene-RM610_RS01615;Dbxref=GenBank:WP_105996717.1;Name=WP_105996717.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637420.1;locus_tag=RM610_RS01615;product=argininosuccinate synthase;protein_id=WP_105996717.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 317311 318642 . + . ID=gene-RM610_RS01620;Name=RM610_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01620;old_locus_tag=RM610_01620 NZ_JAVRJX010000001.1 Protein Homology CDS 317311 318642 . + 0 ID=cds-WP_311541581.1;Parent=gene-RM610_RS01620;Dbxref=GenBank:WP_311541581.1;Name=WP_311541581.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=RM610_RS01620;product=glucose-6-phosphate isomerase;protein_id=WP_311541581.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 318784 319305 . + . ID=gene-RM610_RS01625;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM610_RS01625;old_locus_tag=RM610_01625 NZ_JAVRJX010000001.1 Protein Homology CDS 318784 319305 . + 0 ID=cds-WP_311541582.1;Parent=gene-RM610_RS01625;Dbxref=GenBank:WP_311541582.1;Name=WP_311541582.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: protein motif:HMM:NF021981.7;locus_tag=RM610_RS01625;product=signal peptidase I;protein_id=WP_311541582.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 319317 319898 . + . ID=gene-RM610_RS01630;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM610_RS01630;old_locus_tag=RM610_01630 NZ_JAVRJX010000001.1 Protein Homology CDS 319317 319898 . + 0 ID=cds-WP_105985938.1;Parent=gene-RM610_RS01630;Dbxref=GenBank:WP_105985938.1;Name=WP_105985938.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424628.1;locus_tag=RM610_RS01630;product=signal peptidase I;protein_id=WP_105985938.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 320198 323659 . + . ID=gene-RM610_RS01635;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=RM610_RS01635;old_locus_tag=RM610_01635 NZ_JAVRJX010000001.1 Protein Homology CDS 320198 323659 . + 0 ID=cds-WP_107522379.1;Parent=gene-RM610_RS01635;Dbxref=GenBank:WP_107522379.1;Name=WP_107522379.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=RM610_RS01635;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_107522379.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 323646 327284 . + . ID=gene-RM610_RS01640;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=RM610_RS01640;old_locus_tag=RM610_01640 NZ_JAVRJX010000001.1 Protein Homology CDS 323646 327284 . + 0 ID=cds-WP_311541583.1;Parent=gene-RM610_RS01640;Dbxref=GenBank:WP_311541583.1;Name=WP_311541583.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235847.1;locus_tag=RM610_RS01640;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_311541583.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 327363 328265 . + . ID=gene-RM610_RS01645;Name=RM610_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01645;old_locus_tag=RM610_01645 NZ_JAVRJX010000001.1 Protein Homology CDS 327363 328265 . + 0 ID=cds-WP_107375646.1;Parent=gene-RM610_RS01645;Dbxref=GenBank:WP_107375646.1;Name=WP_107375646.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499459.1;locus_tag=RM610_RS01645;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_107375646.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 328513 328902 . + . ID=gene-RM610_RS01650;Name=RM610_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01650;old_locus_tag=RM610_01650 NZ_JAVRJX010000001.1 Protein Homology CDS 328513 328902 . + 0 ID=cds-WP_107358569.1;Parent=gene-RM610_RS01650;Dbxref=GenBank:WP_107358569.1;Name=WP_107358569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=RM610_RS01650;product=YisL family protein;protein_id=WP_107358569.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 329049 330371 . - . ID=gene-RM610_RS01655;Name=RM610_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01655;old_locus_tag=RM610_01655 NZ_JAVRJX010000001.1 Protein Homology CDS 329049 330371 . - 0 ID=cds-WP_311541584.1;Parent=gene-RM610_RS01655;Dbxref=GenBank:WP_311541584.1;Name=WP_311541584.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=RM610_RS01655;product=CoA-disulfide reductase;protein_id=WP_311541584.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 330368 331210 . - . ID=gene-RM610_RS01660;Name=RM610_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01660;old_locus_tag=RM610_01660 NZ_JAVRJX010000001.1 Protein Homology CDS 330368 331210 . - 0 ID=cds-WP_107358567.1;Parent=gene-RM610_RS01660;Dbxref=GenBank:WP_107358567.1;Name=WP_107358567.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483780.1;locus_tag=RM610_RS01660;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_107358567.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 331323 331631 . + . ID=gene-RM610_RS01665;Name=RM610_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01665;old_locus_tag=RM610_01665 NZ_JAVRJX010000001.1 Protein Homology CDS 331323 331631 . + 0 ID=cds-WP_107358566.1;Parent=gene-RM610_RS01665;Dbxref=GenBank:WP_107358566.1;Name=WP_107358566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=RM610_RS01665;product=metal-sulfur cluster assembly factor;protein_id=WP_107358566.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 331862 334471 . + . ID=gene-RM610_RS01670;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=RM610_RS01670;old_locus_tag=RM610_01670 NZ_JAVRJX010000001.1 Protein Homology CDS 331862 334471 . + 0 ID=cds-WP_107358565.1;Parent=gene-RM610_RS01670;Dbxref=GenBank:WP_107358565.1;Name=WP_107358565.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167299.1;locus_tag=RM610_RS01670;product=ATP-dependent chaperone ClpB;protein_id=WP_107358565.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 334604 334804 . - . ID=gene-RM610_RS01675;Name=RM610_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01675;old_locus_tag=RM610_01675 NZ_JAVRJX010000001.1 Protein Homology CDS 334604 334804 . - 0 ID=cds-WP_311541585.1;Parent=gene-RM610_RS01675;Dbxref=GenBank:WP_311541585.1;Name=WP_311541585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165998.1;locus_tag=RM610_RS01675;product=YjzD family protein;protein_id=WP_311541585.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 334955 335896 . + . ID=gene-RM610_RS01680;Name=RM610_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01680;old_locus_tag=RM610_01680 NZ_JAVRJX010000001.1 Protein Homology CDS 334955 335896 . + 0 ID=cds-WP_107358564.1;Parent=gene-RM610_RS01680;Dbxref=GenBank:WP_107358564.1;Name=WP_107358564.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=RM610_RS01680;product=beta-ketoacyl-ACP synthase III;protein_id=WP_107358564.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 335913 337157 . + . ID=gene-RM610_RS01685;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=RM610_RS01685;old_locus_tag=RM610_01685 NZ_JAVRJX010000001.1 Protein Homology CDS 335913 337157 . + 0 ID=cds-WP_107358563.1;Parent=gene-RM610_RS01685;Dbxref=GenBank:WP_107358563.1;Name=WP_107358563.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=RM610_RS01685;product=beta-ketoacyl-ACP synthase II;protein_id=WP_107358563.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 337476 337856 . - . ID=gene-RM610_RS01690;Name=RM610_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01690;old_locus_tag=RM610_01690 NZ_JAVRJX010000001.1 Protein Homology CDS 337476 337856 . - 0 ID=cds-WP_107358562.1;Parent=gene-RM610_RS01690;Dbxref=GenBank:WP_107358562.1;Name=WP_107358562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024438.7;locus_tag=RM610_RS01690;product=DUF3899 domain-containing protein;protein_id=WP_107358562.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 338102 339028 . + . ID=gene-RM610_RS01695;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=RM610_RS01695;old_locus_tag=RM610_01695 NZ_JAVRJX010000001.1 Protein Homology CDS 338102 339028 . + 0 ID=cds-WP_105965169.1;Parent=gene-RM610_RS01695;Dbxref=GenBank:WP_105965169.1;Name=WP_105965169.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=RM610_RS01695;product=oligopeptide ABC transporter permease;protein_id=WP_105965169.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 339028 340089 . + . ID=gene-RM610_RS01700;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=RM610_RS01700;old_locus_tag=RM610_01700 NZ_JAVRJX010000001.1 Protein Homology CDS 339028 340089 . + 0 ID=cds-WP_037572204.1;Parent=gene-RM610_RS01700;Dbxref=GenBank:WP_037572204.1;Name=WP_037572204.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=RM610_RS01700;product=oligopeptide ABC transporter permease;protein_id=WP_037572204.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 340104 341177 . + . ID=gene-RM610_RS01705;Name=RM610_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01705;old_locus_tag=RM610_01705 NZ_JAVRJX010000001.1 Protein Homology CDS 340104 341177 . + 0 ID=cds-WP_037572201.1;Parent=gene-RM610_RS01705;Dbxref=GenBank:WP_037572201.1;Name=WP_037572201.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424645.1;locus_tag=RM610_RS01705;product=ABC transporter ATP-binding protein;protein_id=WP_037572201.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 341177 342115 . + . ID=gene-RM610_RS01710;Name=RM610_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01710;old_locus_tag=RM610_01710 NZ_JAVRJX010000001.1 Protein Homology CDS 341177 342115 . + 0 ID=cds-WP_037572198.1;Parent=gene-RM610_RS01710;Dbxref=GenBank:WP_037572198.1;Name=WP_037572198.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459519.1;locus_tag=RM610_RS01710;product=ABC transporter ATP-binding protein;protein_id=WP_037572198.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 342181 343806 . + . ID=gene-RM610_RS01715;Name=RM610_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01715;old_locus_tag=RM610_01715 NZ_JAVRJX010000001.1 Protein Homology CDS 342181 343806 . + 0 ID=cds-WP_228512597.1;Parent=gene-RM610_RS01715;Dbxref=GenBank:WP_228512597.1;Name=WP_228512597.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=RM610_RS01715;product=peptide ABC transporter substrate-binding protein;protein_id=WP_228512597.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 343921 344913 . - . ID=gene-RM610_RS01720;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=RM610_RS01720;old_locus_tag=RM610_01720 NZ_JAVRJX010000001.1 Protein Homology CDS 343921 344913 . - 0 ID=cds-WP_311541586.1;Parent=gene-RM610_RS01720;Dbxref=GenBank:WP_311541586.1;Name=WP_311541586.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424648.1;locus_tag=RM610_RS01720;product=tryptophan--tRNA ligase;protein_id=WP_311541586.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 345218 345613 . + . ID=gene-RM610_RS01725;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=RM610_RS01725;old_locus_tag=RM610_01725 NZ_JAVRJX010000001.1 Protein Homology CDS 345218 345613 . + 0 ID=cds-WP_037572189.1;Parent=gene-RM610_RS01725;Dbxref=GenBank:WP_037572189.1;Name=WP_037572189.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=RM610_RS01725;product=transcriptional regulator SpxA;protein_id=WP_037572189.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 345839 346552 . + . ID=gene-RM610_RS01730;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=RM610_RS01730;old_locus_tag=RM610_01730 NZ_JAVRJX010000001.1 Protein Homology CDS 345839 346552 . + 0 ID=cds-WP_107381668.1;Parent=gene-RM610_RS01730;Dbxref=GenBank:WP_107381668.1;Name=WP_107381668.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217738.1;locus_tag=RM610_RS01730;product=adaptor protein MecA;protein_id=WP_107381668.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 346750 347745 . + . ID=gene-RM610_RS01735;Name=RM610_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01735;old_locus_tag=RM610_01735 NZ_JAVRJX010000001.1 Protein Homology CDS 346750 347745 . + 0 ID=cds-WP_133171098.1;Parent=gene-RM610_RS01735;Dbxref=GenBank:WP_133171098.1;Name=WP_133171098.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF017832.8;locus_tag=RM610_RS01735;product=competence protein CoiA;protein_id=WP_133171098.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 347816 349624 . + . ID=gene-RM610_RS01740;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM610_RS01740;old_locus_tag=RM610_01740 NZ_JAVRJX010000001.1 Protein Homology CDS 347816 349624 . + 0 ID=cds-WP_107381666.1;Parent=gene-RM610_RS01740;Dbxref=GenBank:WP_107381666.1;Name=WP_107381666.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=RM610_RS01740;product=oligoendopeptidase F;protein_id=WP_107381666.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 349940 350887 . + . ID=gene-RM610_RS01745;Name=RM610_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01745;old_locus_tag=RM610_01745 NZ_JAVRJX010000001.1 Protein Homology CDS 349940 350887 . + 0 ID=cds-WP_311541588.1;Parent=gene-RM610_RS01745;Dbxref=GenBank:WP_311541588.1;Name=WP_311541588.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121211.1;locus_tag=RM610_RS01745;product=IS30 family transposase;protein_id=WP_311541588.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 350958 351752 . - . ID=gene-RM610_RS01750;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=RM610_RS01750;old_locus_tag=RM610_01750 NZ_JAVRJX010000001.1 Protein Homology CDS 350958 351752 . - 0 ID=cds-WP_037572173.1;Parent=gene-RM610_RS01750;Dbxref=GenBank:WP_037572173.1;Name=WP_037572173.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=RM610_RS01750;product=protease adaptor protein YjbH;protein_id=WP_037572173.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 351767 352138 . - . ID=gene-RM610_RS01755;Name=RM610_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01755;old_locus_tag=RM610_01755 NZ_JAVRJX010000001.1 Protein Homology CDS 351767 352138 . - 0 ID=cds-WP_107381669.1;Parent=gene-RM610_RS01755;Dbxref=GenBank:WP_107381669.1;Name=WP_107381669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722302.1;locus_tag=RM610_RS01755;product=truncated hemoglobin YjbI;protein_id=WP_107381669.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 352227 352817 . - . ID=gene-RM610_RS01760;Name=RM610_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01760;old_locus_tag=RM610_01760 NZ_JAVRJX010000001.1 Protein Homology CDS 352227 352817 . - 0 ID=cds-WP_107358556.1;Parent=gene-RM610_RS01760;Dbxref=GenBank:WP_107358556.1;Name=WP_107358556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637390.1;locus_tag=RM610_RS01760;product=CYTH domain-containing protein;protein_id=WP_107358556.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 353019 353366 . + . ID=gene-RM610_RS01765;Name=RM610_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01765;old_locus_tag=RM610_01765 NZ_JAVRJX010000001.1 Protein Homology CDS 353019 353366 . + 0 ID=cds-WP_105985949.1;Parent=gene-RM610_RS01765;Dbxref=GenBank:WP_105985949.1;Name=WP_105985949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167279.1;locus_tag=RM610_RS01765;product=UPF0738 family protein;protein_id=WP_105985949.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 353383 354027 . + . ID=gene-RM610_RS01770;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=RM610_RS01770;old_locus_tag=RM610_01770 NZ_JAVRJX010000001.1 Protein Homology CDS 353383 354027 . + 0 ID=cds-WP_037572160.1;Parent=gene-RM610_RS01770;Dbxref=GenBank:WP_037572160.1;Name=WP_037572160.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424659.1;locus_tag=RM610_RS01770;product=GTP diphosphokinase;protein_id=WP_037572160.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 354027 354836 . + . ID=gene-RM610_RS01775;Name=RM610_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01775;old_locus_tag=RM610_01775 NZ_JAVRJX010000001.1 Protein Homology CDS 354027 354836 . + 0 ID=cds-WP_107358554.1;Parent=gene-RM610_RS01775;Dbxref=GenBank:WP_107358554.1;Name=WP_107358554.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=RM610_RS01775;product=NAD kinase;protein_id=WP_107358554.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 354833 355687 . + . ID=gene-RM610_RS01780;Name=RM610_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01780;old_locus_tag=RM610_01780 NZ_JAVRJX010000001.1 Protein Homology CDS 354833 355687 . + 0 ID=cds-WP_107375637.1;Parent=gene-RM610_RS01780;Dbxref=GenBank:WP_107375637.1;Name=WP_107375637.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=RM610_RS01780;product=RluA family pseudouridine synthase;protein_id=WP_107375637.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 355758 357101 . + . ID=gene-RM610_RS01785;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=RM610_RS01785;old_locus_tag=RM610_01785 NZ_JAVRJX010000001.1 Protein Homology CDS 355758 357101 . + 0 ID=cds-WP_103159406.1;Parent=gene-RM610_RS01785;Dbxref=GenBank:WP_103159406.1;Name=WP_103159406.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383551.1;locus_tag=RM610_RS01785;product=magnesium transporter;protein_id=WP_103159406.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 357112 358947 . + . ID=gene-RM610_RS01790;Name=RM610_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01790;old_locus_tag=RM610_01790 NZ_JAVRJX010000001.1 Protein Homology CDS 357112 358947 . + 0 ID=cds-WP_311541589.1;Parent=gene-RM610_RS01790;Dbxref=GenBank:WP_311541589.1;Name=WP_311541589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=RM610_RS01790;product=monovalent cation:proton antiporter family protein;protein_id=WP_311541589.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 359123 359893 . + . ID=gene-RM610_RS01795;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=RM610_RS01795;old_locus_tag=RM610_01795 NZ_JAVRJX010000001.1 Protein Homology CDS 359123 359893 . + 0 ID=cds-WP_107358551.1;Parent=gene-RM610_RS01795;Dbxref=GenBank:WP_107358551.1;Name=WP_107358551.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=RM610_RS01795;product=enoyl-ACP reductase FabI;protein_id=WP_107358551.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 360040 361137 . - . ID=gene-RM610_RS01800;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=RM610_RS01800;old_locus_tag=RM610_01800 NZ_JAVRJX010000001.1 Protein Homology CDS 360040 361137 . - 0 ID=cds-WP_311541591.1;Parent=gene-RM610_RS01800;Dbxref=GenBank:WP_311541591.1;Name=WP_311541591.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=RM610_RS01800;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_311541591.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 361337 362917 . + . ID=gene-RM610_RS01805;Name=RM610_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01805;old_locus_tag=RM610_01805 NZ_JAVRJX010000001.1 Protein Homology CDS 361337 362917 . + 0 ID=cds-WP_311541592.1;Parent=gene-RM610_RS01805;Dbxref=GenBank:WP_311541592.1;Name=WP_311541592.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899872.1;locus_tag=RM610_RS01805;product=alanine/glycine:cation symporter family protein;protein_id=WP_311541592.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 363087 363824 . + . ID=gene-RM610_RS01810;Name=RM610_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01810;old_locus_tag=RM610_01810 NZ_JAVRJX010000001.1 Protein Homology CDS 363087 363824 . + 0 ID=cds-WP_107376174.1;Parent=gene-RM610_RS01810;Dbxref=GenBank:WP_107376174.1;Name=WP_107376174.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450759.1;locus_tag=RM610_RS01810;product=esterase family protein;protein_id=WP_107376174.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 363875 364384 . + . ID=gene-RM610_RS01815;Name=RM610_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01815;old_locus_tag=RM610_01815 NZ_JAVRJX010000001.1 Protein Homology CDS 363875 364384 . + 0 ID=cds-WP_037572139.1;Parent=gene-RM610_RS01815;Dbxref=GenBank:WP_037572139.1;Name=WP_037572139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494354.1;locus_tag=RM610_RS01815;product=2'-5' RNA ligase family protein;protein_id=WP_037572139.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 364714 365901 . - . ID=gene-RM610_RS01820;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=RM610_RS01820;old_locus_tag=RM610_01820 NZ_JAVRJX010000001.1 Protein Homology CDS 364714 365901 . - 0 ID=cds-WP_182472272.1;Parent=gene-RM610_RS01820;Dbxref=GenBank:WP_182472272.1;Name=WP_182472272.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303474.1;locus_tag=RM610_RS01820;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_182472272.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 365879 367054 . - . ID=gene-RM610_RS01825;Name=RM610_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01825;old_locus_tag=RM610_01825 NZ_JAVRJX010000001.1 Protein Homology CDS 365879 367054 . - 0 ID=cds-WP_311541593.1;Parent=gene-RM610_RS01825;Dbxref=GenBank:WP_311541593.1;Name=WP_311541593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303473.1;locus_tag=RM610_RS01825;product=diglucosyl diacylglycerol synthase;protein_id=WP_311541593.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 367578 369062 . + . ID=gene-RM610_RS01830;Name=RM610_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01830;old_locus_tag=RM610_01830 NZ_JAVRJX010000001.1 Protein Homology CDS 367578 369062 . + 0 ID=cds-WP_311541594.1;Parent=gene-RM610_RS01830;Dbxref=GenBank:WP_311541594.1;Name=WP_311541594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=RM610_RS01830;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_311541594.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 369052 369291 . + . ID=gene-RM610_RS01835;Name=RM610_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01835;old_locus_tag=RM610_01835 NZ_JAVRJX010000001.1 Protein Homology CDS 369052 369291 . + 0 ID=cds-WP_194746182.1;Parent=gene-RM610_RS01835;Dbxref=GenBank:WP_194746182.1;Name=WP_194746182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=RM610_RS01835;product=YueH family protein;protein_id=WP_194746182.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 369304 370866 . + . ID=gene-RM610_RS01840;Name=RM610_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01840;old_locus_tag=RM610_01840 NZ_JAVRJX010000001.1 Protein Homology CDS 369304 370866 . + 0 ID=cds-WP_037572120.1;Parent=gene-RM610_RS01840;Dbxref=GenBank:WP_037572120.1;Name=WP_037572120.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485407.1;locus_tag=RM610_RS01840;product=peptide chain release factor 3;protein_id=WP_037572120.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 370952 371070 . + . ID=id-NZ_JAVRJX010000001.1:370952..371070;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00080,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 371147 371956 . + . ID=gene-RM610_RS01845;Name=RM610_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01845;old_locus_tag=RM610_01845 NZ_JAVRJX010000001.1 Protein Homology CDS 371147 371956 . + 0 ID=cds-WP_165885969.1;Parent=gene-RM610_RS01845;Dbxref=GenBank:WP_165885969.1;Name=WP_165885969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499510.1;locus_tag=RM610_RS01845;product=MeeY/MeeF family manganese export membrane protein;protein_id=WP_165885969.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 372110 373723 . + . ID=gene-RM610_RS01850;Name=RM610_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01850;old_locus_tag=RM610_01850 NZ_JAVRJX010000001.1 Protein Homology CDS 372110 373723 . + 0 ID=cds-WP_107381542.1;Parent=gene-RM610_RS01850;Dbxref=GenBank:WP_107381542.1;Name=WP_107381542.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=RM610_RS01850;product=S1C family serine protease;protein_id=WP_107381542.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 373740 375098 . + . ID=gene-RM610_RS01855;Name=RM610_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01855;old_locus_tag=RM610_01855 NZ_JAVRJX010000001.1 Protein Homology CDS 373740 375098 . + 0 ID=cds-WP_107375912.1;Parent=gene-RM610_RS01855;Dbxref=GenBank:WP_107375912.1;Name=WP_107375912.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488327.1;locus_tag=RM610_RS01855;product=TrkH family potassium uptake protein;protein_id=WP_107375912.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 375269 376777 . + . ID=gene-RM610_RS01860;Name=RM610_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01860;old_locus_tag=RM610_01860 NZ_JAVRJX010000001.1 Protein Homology CDS 375269 376777 . + 0 ID=cds-WP_107381540.1;Parent=gene-RM610_RS01860;Dbxref=GenBank:WP_107381540.1;Name=WP_107381540.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424683.1;locus_tag=RM610_RS01860;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_107381540.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 376859 377461 . - . ID=gene-RM610_RS01865;Name=RM610_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01865;old_locus_tag=RM610_01865 NZ_JAVRJX010000001.1 Protein Homology CDS 376859 377461 . - 0 ID=cds-WP_103159397.1;Parent=gene-RM610_RS01865;Dbxref=GenBank:WP_103159397.1;Name=WP_103159397.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=RM610_RS01865;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_103159397.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 377468 377653 . - . ID=gene-RM610_RS01870;Name=RM610_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01870;old_locus_tag=RM610_01870 NZ_JAVRJX010000001.1 Protein Homology CDS 377468 377653 . - 0 ID=cds-WP_037572105.1;Parent=gene-RM610_RS01870;Dbxref=GenBank:WP_037572105.1;Name=WP_037572105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=RM610_RS01870;product=YkvS family protein;protein_id=WP_037572105.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 377828 378820 . + . ID=gene-RM610_RS01875;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=RM610_RS01875;old_locus_tag=RM610_01875 NZ_JAVRJX010000001.1 Protein Homology CDS 377828 378820 . + 0 ID=cds-WP_107375910.1;Parent=gene-RM610_RS01875;Dbxref=GenBank:WP_107375910.1;Name=WP_107375910.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=RM610_RS01875;product=lipoate--protein ligase;protein_id=WP_107375910.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 378888 379115 . - . ID=gene-RM610_RS01880;Name=RM610_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01880;old_locus_tag=RM610_01880 NZ_JAVRJX010000001.1 Protein Homology CDS 378888 379115 . - 0 ID=cds-WP_311541595.1;Parent=gene-RM610_RS01880;Dbxref=GenBank:WP_311541595.1;Name=WP_311541595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168467.1;locus_tag=RM610_RS01880;product=IDEAL domain-containing protein;protein_id=WP_311541595.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 379343 379981 . + . ID=gene-RM610_RS01885;Name=RM610_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01885;old_locus_tag=RM610_01885 NZ_JAVRJX010000001.1 Protein Homology CDS 379343 379981 . + 0 ID=cds-WP_051604934.1;Parent=gene-RM610_RS01885;Dbxref=GenBank:WP_051604934.1;Name=WP_051604934.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424690.1;locus_tag=RM610_RS01885;product=competence protein ComK;protein_id=WP_051604934.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 380378 380827 . + . ID=gene-RM610_RS01890;Name=RM610_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01890;old_locus_tag=RM610_01890 NZ_JAVRJX010000001.1 Protein Homology CDS 380378 380827 . + 0 ID=cds-WP_107369886.1;Parent=gene-RM610_RS01890;Dbxref=GenBank:WP_107369886.1;Name=WP_107369886.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276697.1;locus_tag=RM610_RS01890;product=GNAT family N-acetyltransferase;protein_id=WP_107369886.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 380986 381141 . + . ID=gene-RM610_RS01895;Name=RM610_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01895;old_locus_tag=RM610_01895 NZ_JAVRJX010000001.1 Protein Homology CDS 380986 381141 . + 0 ID=cds-WP_182474594.1;Parent=gene-RM610_RS01895;Dbxref=GenBank:WP_182474594.1;Name=WP_182474594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834627.1;locus_tag=RM610_RS01895;product=hypothetical protein;protein_id=WP_182474594.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 381193 381573 . - . ID=gene-RM610_RS01900;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=RM610_RS01900;old_locus_tag=RM610_01900 NZ_JAVRJX010000001.1 Protein Homology CDS 381193 381573 . - 0 ID=cds-WP_001284658.1;Parent=gene-RM610_RS01900;Dbxref=GenBank:WP_001284658.1;Name=WP_001284658.1;Ontology_term=GO:0045892;gbkey=CDS;gene=blaI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=RM610_RS01900;product=penicillinase repressor BlaI;protein_id=WP_001284658.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 381563 383320 . - . ID=gene-RM610_RS01905;Name=blaR1;gbkey=Gene;gene=blaR1;gene_biotype=protein_coding;locus_tag=RM610_RS01905;old_locus_tag=RM610_01905 NZ_JAVRJX010000001.1 Protein Homology CDS 381563 383320 . - 0 ID=cds-WP_001096367.1;Parent=gene-RM610_RS01905;Dbxref=GenBank:WP_001096367.1;Name=WP_001096367.1;gbkey=CDS;gene=blaR1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=RM610_RS01905;product=beta-lactam sensor/signal transducer BlaR1;protein_id=WP_001096367.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 383427 384272 . + . ID=gene-RM610_RS01910;Name=blaZ;gbkey=Gene;gene=blaZ;gene_biotype=protein_coding;locus_tag=RM610_RS01910;old_locus_tag=RM610_01910 NZ_JAVRJX010000001.1 Protein Homology CDS 383427 384272 . + 0 ID=cds-WP_000733621.1;Parent=gene-RM610_RS01910;Dbxref=GenBank:WP_000733621.1;Name=WP_000733621.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaZ;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=RM610_RS01910;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;protein_id=WP_000733621.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 384313 386001 . - . ID=gene-RM610_RS01915;Name=RM610_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01915;old_locus_tag=RM610_01915 NZ_JAVRJX010000001.1 Protein Homology CDS 384313 386001 . - 0 ID=cds-WP_155975255.1;Parent=gene-RM610_RS01915;Dbxref=GenBank:WP_155975255.1;Name=WP_155975255.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502422.1;locus_tag=RM610_RS01915;product=IS1182 family transposase;protein_id=WP_155975255.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 386489 386899 . + . ID=gene-RM610_RS01920;Name=RM610_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01920;old_locus_tag=RM610_01920 NZ_JAVRJX010000001.1 Protein Homology CDS 386489 386899 . + 0 ID=cds-WP_000612779.1;Parent=gene-RM610_RS01920;Dbxref=GenBank:WP_000612779.1;Name=WP_000612779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612779.1;locus_tag=RM610_RS01920;product=YolD-like family protein;protein_id=WP_000612779.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 386942 388312 . - . ID=gene-RM610_RS01925;Name=RM610_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01925;old_locus_tag=RM610_01925 NZ_JAVRJX010000001.1 Protein Homology CDS 386942 388312 . - 0 ID=cds-WP_000368920.1;Parent=gene-RM610_RS01925;Dbxref=GenBank:WP_000368920.1;Name=WP_000368920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=RM610_RS01925;product=hypothetical protein;protein_id=WP_000368920.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 388317 388682 . - . ID=gene-RM610_RS01930;Name=RM610_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01930;old_locus_tag=RM610_01930 NZ_JAVRJX010000001.1 Protein Homology CDS 388317 388682 . - 0 ID=cds-WP_000410574.1;Parent=gene-RM610_RS01930;Dbxref=GenBank:WP_000410574.1;Name=WP_000410574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410574.1;locus_tag=RM610_RS01930;product=DUF6262 family protein;protein_id=WP_000410574.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 388691 390754 . - . ID=gene-RM610_RS01935;Name=RM610_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01935;old_locus_tag=RM610_01935 NZ_JAVRJX010000001.1 Protein Homology CDS 388691 390754 . - 0 ID=cds-WP_000026851.1;Parent=gene-RM610_RS01935;Dbxref=GenBank:WP_000026851.1;Name=WP_000026851.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=RM610_RS01935;product=site-specific integrase;protein_id=WP_000026851.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 390757 391869 . - . ID=gene-RM610_RS01940;Name=RM610_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01940;old_locus_tag=RM610_01940 NZ_JAVRJX010000001.1 Protein Homology CDS 390757 391869 . - 0 ID=cds-WP_000706213.1;Parent=gene-RM610_RS01940;Dbxref=GenBank:WP_000706213.1;Name=WP_000706213.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=RM610_RS01940;product=tyrosine-type recombinase/integrase;protein_id=WP_000706213.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 392074 392349 . + . ID=gene-RM610_RS01945;Name=RM610_RS01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS01945;old_locus_tag=RM610_01945;partial=true;pseudo=true;start_range=.,392074 NZ_JAVRJX010000001.1 Protein Homology CDS 392074 392349 . + 0 ID=cds-RM610_RS01945;Parent=gene-RM610_RS01945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020438.7;locus_tag=RM610_RS01945;partial=true;product=YolD-like family protein;pseudo=true;start_range=.,392074;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 392502 392576 . + . ID=gene-RM610_RS01950;Name=RM610_RS01950;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS01950;old_locus_tag=RM610_01950 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 392502 392576 . + . ID=rna-RM610_RS01950;Parent=gene-RM610_RS01950;anticodon=(pos:392534..392536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS01950;product=tRNA-Asn NZ_JAVRJX010000001.1 tRNAscan-SE exon 392502 392576 . + . ID=exon-RM610_RS01950-1;Parent=rna-RM610_RS01950;anticodon=(pos:392534..392536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS01950;product=tRNA-Asn NZ_JAVRJX010000001.1 RefSeq gene 392580 392668 . + . ID=gene-RM610_RS01955;Name=RM610_RS01955;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS01955;old_locus_tag=RM610_01955 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 392580 392668 . + . ID=rna-RM610_RS01955;Parent=gene-RM610_RS01955;anticodon=(pos:392615..392617);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS01955;product=tRNA-Ser NZ_JAVRJX010000001.1 tRNAscan-SE exon 392580 392668 . + . ID=exon-RM610_RS01955-1;Parent=rna-RM610_RS01955;anticodon=(pos:392615..392617);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS01955;product=tRNA-Ser NZ_JAVRJX010000001.1 RefSeq gene 393308 393865 . + . ID=gene-RM610_RS01960;Name=RM610_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01960;old_locus_tag=RM610_01960 NZ_JAVRJX010000001.1 Protein Homology CDS 393308 393865 . + 0 ID=cds-WP_107359670.1;Parent=gene-RM610_RS01960;Dbxref=GenBank:WP_107359670.1;Name=WP_107359670.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=RM610_RS01960;product=GNAT family N-acetyltransferase;protein_id=WP_107359670.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 393877 394524 . + . ID=gene-RM610_RS01965;Name=RM610_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01965;old_locus_tag=RM610_01965 NZ_JAVRJX010000001.1 Protein Homology CDS 393877 394524 . + 0 ID=cds-WP_107375909.1;Parent=gene-RM610_RS01965;Dbxref=GenBank:WP_107375909.1;Name=WP_107375909.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=RM610_RS01965;product=ABC transporter ATP-binding protein;protein_id=WP_107375909.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 394521 395297 . + . ID=gene-RM610_RS01970;Name=RM610_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01970;old_locus_tag=RM610_01970 NZ_JAVRJX010000001.1 Protein Homology CDS 394521 395297 . + 0 ID=cds-WP_107375908.1;Parent=gene-RM610_RS01970;Dbxref=GenBank:WP_107375908.1;Name=WP_107375908.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302408.1;locus_tag=RM610_RS01970;product=ABC transporter permease;protein_id=WP_107375908.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 395320 396258 . - . ID=gene-RM610_RS01975;Name=RM610_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01975;old_locus_tag=RM610_01975 NZ_JAVRJX010000001.1 Protein Homology CDS 395320 396258 . - 0 ID=cds-WP_107359667.1;Parent=gene-RM610_RS01975;Dbxref=GenBank:WP_107359667.1;Name=WP_107359667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=RM610_RS01975;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_107359667.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 396433 397785 . + . ID=gene-RM610_RS01980;Name=RM610_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS01980;old_locus_tag=RM610_01980 NZ_JAVRJX010000001.1 Protein Homology CDS 396433 397785 . + 0 ID=cds-WP_107381250.1;Parent=gene-RM610_RS01980;Dbxref=GenBank:WP_107381250.1;Name=WP_107381250.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=RM610_RS01980;product=isochorismate synthase;protein_id=WP_107381250.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 397787 399460 . + . ID=gene-RM610_RS01985;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=RM610_RS01985;old_locus_tag=RM610_01985 NZ_JAVRJX010000001.1 Protein Homology CDS 397787 399460 . + 0 ID=cds-WP_107519351.1;Parent=gene-RM610_RS01985;Dbxref=GenBank:WP_107519351.1;Name=WP_107519351.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833068.1;locus_tag=RM610_RS01985;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_107519351.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 399447 400262 . + . ID=gene-RM610_RS01990;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=RM610_RS01990;old_locus_tag=RM610_01990 NZ_JAVRJX010000001.1 Protein Homology CDS 399447 400262 . + 0 ID=cds-WP_107375905.1;Parent=gene-RM610_RS01990;Dbxref=GenBank:WP_107375905.1;Name=WP_107375905.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220255.1;locus_tag=RM610_RS01990;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_107375905.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 400255 401073 . + . ID=gene-RM610_RS01995;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=RM610_RS01995;old_locus_tag=RM610_01995 NZ_JAVRJX010000001.1 Protein Homology CDS 400255 401073 . + 0 ID=cds-WP_105986000.1;Parent=gene-RM610_RS01995;Dbxref=GenBank:WP_105986000.1;Name=WP_105986000.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=RM610_RS01995;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_105986000.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 401166 402332 . - . ID=gene-RM610_RS02000;Name=RM610_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02000;old_locus_tag=RM610_02000 NZ_JAVRJX010000001.1 Protein Homology CDS 401166 402332 . - 0 ID=cds-WP_107369894.1;Parent=gene-RM610_RS02000;Dbxref=GenBank:WP_107369894.1;Name=WP_107369894.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508052.1;locus_tag=RM610_RS02000;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_107369894.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 402403 403410 . - . ID=gene-RM610_RS02005;Name=RM610_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02005;old_locus_tag=RM610_02005 NZ_JAVRJX010000001.1 Protein Homology CDS 402403 403410 . - 0 ID=cds-WP_107375903.1;Parent=gene-RM610_RS02005;Dbxref=GenBank:WP_107375903.1;Name=WP_107375903.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=RM610_RS02005;product=acyltransferase family protein;protein_id=WP_107375903.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 403770 407768 . - . ID=gene-RM610_RS02010;Name=RM610_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02010;old_locus_tag=RM610_02010 NZ_JAVRJX010000001.1 Protein Homology CDS 403770 407768 . - 0 ID=cds-WP_311541620.1;Parent=gene-RM610_RS02010;Dbxref=GenBank:WP_311541620.1;Name=WP_311541620.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167711.1;locus_tag=RM610_RS02010;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_311541620.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 407972 408394 . - . ID=gene-RM610_RS02015;Name=RM610_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02015;old_locus_tag=RM610_02015 NZ_JAVRJX010000001.1 Protein Homology CDS 407972 408394 . - 0 ID=cds-WP_107369897.1;Parent=gene-RM610_RS02015;Dbxref=GenBank:WP_107369897.1;Name=WP_107369897.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007085452.1;locus_tag=RM610_RS02015;product=GNAT family N-acetyltransferase;protein_id=WP_107369897.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 408527 408997 . - . ID=gene-RM610_RS02020;Name=RM610_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02020;old_locus_tag=RM610_02020 NZ_JAVRJX010000001.1 Protein Homology CDS 408527 408997 . - 0 ID=cds-WP_107359659.1;Parent=gene-RM610_RS02020;Dbxref=GenBank:WP_107359659.1;Name=WP_107359659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471869.1;locus_tag=RM610_RS02020;product=DUF2538 family protein;protein_id=WP_107359659.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 409014 410261 . - . ID=gene-RM610_RS02025;Name=RM610_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02025;old_locus_tag=RM610_02025 NZ_JAVRJX010000001.1 Protein Homology CDS 409014 410261 . - 0 ID=cds-WP_107375900.1;Parent=gene-RM610_RS02025;Dbxref=GenBank:WP_107375900.1;Name=WP_107375900.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471935.1;locus_tag=RM610_RS02025;product=LCP family protein;protein_id=WP_107375900.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 410613 412265 . + . ID=gene-RM610_RS02030;Name=RM610_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02030;old_locus_tag=RM610_02030 NZ_JAVRJX010000001.1 Protein Homology CDS 410613 412265 . + 0 ID=cds-WP_311541621.1;Parent=gene-RM610_RS02030;Dbxref=GenBank:WP_311541621.1;Name=WP_311541621.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728935.1;locus_tag=RM610_RS02030;product=phospho-sugar mutase;protein_id=WP_311541621.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 412343 413491 . - . ID=gene-RM610_RS02035;Name=RM610_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02035;old_locus_tag=RM610_02035 NZ_JAVRJX010000001.1 Protein Homology CDS 412343 413491 . - 0 ID=cds-WP_311541622.1;Parent=gene-RM610_RS02035;Dbxref=GenBank:WP_311541622.1;Name=WP_311541622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167474.1;locus_tag=RM610_RS02035;product=SH3 domain-containing protein;protein_id=WP_311541622.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 413872 414303 . + . ID=gene-RM610_RS02040;Name=RM610_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02040;old_locus_tag=RM610_02040 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 413872 414303 . + 0 ID=cds-WP_311541623.1;Parent=gene-RM610_RS02040;Dbxref=GenBank:WP_311541623.1;Name=WP_311541623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS02040;product=hypothetical protein;protein_id=WP_311541623.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 414856 415110 . + . ID=gene-RM610_RS02045;Name=RM610_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02045;old_locus_tag=RM610_02050 NZ_JAVRJX010000001.1 Protein Homology CDS 414856 415110 . + 0 ID=cds-WP_311541624.1;Parent=gene-RM610_RS02045;Dbxref=GenBank:WP_311541624.1;Name=WP_311541624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=RM610_RS02045;product=SH3 domain-containing protein;protein_id=WP_311541624.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 415240 415485 . + . ID=gene-RM610_RS02050;Name=RM610_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02050;old_locus_tag=RM610_02055 NZ_JAVRJX010000001.1 Protein Homology CDS 415240 415485 . + 0 ID=cds-WP_228512543.1;Parent=gene-RM610_RS02050;Dbxref=GenBank:WP_228512543.1;Name=WP_228512543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=RM610_RS02050;product=SH3 domain-containing protein;protein_id=WP_228512543.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 415825 417087 . + . ID=gene-RM610_RS02055;Name=RM610_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02055;old_locus_tag=RM610_02060 NZ_JAVRJX010000001.1 Protein Homology CDS 415825 417087 . + 0 ID=cds-WP_107381864.1;Parent=gene-RM610_RS02055;Dbxref=GenBank:WP_107381864.1;Name=WP_107381864.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498728.1;locus_tag=RM610_RS02055;product=nucleotide sugar dehydrogenase;protein_id=WP_107381864.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 417208 418134 . + . ID=gene-RM610_RS02060;Name=RM610_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02060;old_locus_tag=RM610_02065 NZ_JAVRJX010000001.1 Protein Homology CDS 417208 418134 . + 0 ID=cds-WP_107522380.1;Parent=gene-RM610_RS02060;Dbxref=GenBank:WP_107522380.1;Name=WP_107522380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728937.1;locus_tag=RM610_RS02060;product=hypothetical protein;protein_id=WP_107522380.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 418136 420697 . + . ID=gene-RM610_RS02065;Name=RM610_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02065;old_locus_tag=RM610_02070 NZ_JAVRJX010000001.1 Protein Homology CDS 418136 420697 . + 0 ID=cds-WP_311541625.1;Parent=gene-RM610_RS02065;Dbxref=GenBank:WP_311541625.1;Name=WP_311541625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=RM610_RS02065;product=glycosyltransferase;protein_id=WP_311541625.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 420712 422577 . + . ID=gene-RM610_RS02070;Name=RM610_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02070;old_locus_tag=RM610_02075 NZ_JAVRJX010000001.1 Protein Homology CDS 420712 422577 . + 0 ID=cds-WP_311541627.1;Parent=gene-RM610_RS02070;Dbxref=GenBank:WP_311541627.1;Name=WP_311541627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=RM610_RS02070;product=hypothetical protein;protein_id=WP_311541627.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 422574 423383 . + . ID=gene-RM610_RS02075;Name=RM610_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02075;old_locus_tag=RM610_02080 NZ_JAVRJX010000001.1 Protein Homology CDS 422574 423383 . + 0 ID=cds-WP_105986010.1;Parent=gene-RM610_RS02075;Dbxref=GenBank:WP_105986010.1;Name=WP_105986010.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=RM610_RS02075;product=ABC transporter permease;protein_id=WP_105986010.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 423405 424595 . + . ID=gene-RM610_RS02080;Name=RM610_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02080;old_locus_tag=RM610_02085 NZ_JAVRJX010000001.1 Protein Homology CDS 423405 424595 . + 0 ID=cds-WP_311541628.1;Parent=gene-RM610_RS02080;Dbxref=GenBank:WP_311541628.1;Name=WP_311541628.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=RM610_RS02080;product=glycosyltransferase family 4 protein;protein_id=WP_311541628.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 424601 425518 . + . ID=gene-RM610_RS02085;Name=RM610_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02085;old_locus_tag=RM610_02090 NZ_JAVRJX010000001.1 Protein Homology CDS 424601 425518 . + 0 ID=cds-WP_107381117.1;Parent=gene-RM610_RS02085;Dbxref=GenBank:WP_107381117.1;Name=WP_107381117.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167467.1;locus_tag=RM610_RS02085;product=ABC transporter ATP-binding protein;protein_id=WP_107381117.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 425538 426356 . + . ID=gene-RM610_RS02090;Name=RM610_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02090;old_locus_tag=RM610_02095 NZ_JAVRJX010000001.1 Protein Homology CDS 425538 426356 . + 0 ID=cds-WP_107389431.1;Parent=gene-RM610_RS02090;Dbxref=GenBank:WP_107389431.1;Name=WP_107389431.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=RM610_RS02090;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_107389431.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 426374 427717 . + . ID=gene-RM610_RS02095;Name=RM610_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02095;old_locus_tag=RM610_02100 NZ_JAVRJX010000001.1 Protein Homology CDS 426374 427717 . + 0 ID=cds-WP_311541629.1;Parent=gene-RM610_RS02095;Dbxref=GenBank:WP_311541629.1;Name=WP_311541629.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=RM610_RS02095;product=glycosyltransferase;protein_id=WP_311541629.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 428032 428322 . - . ID=gene-RM610_RS02100;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=RM610_RS02100;old_locus_tag=RM610_02105 NZ_JAVRJX010000001.1 Protein Homology CDS 428032 428322 . - 0 ID=cds-WP_037571876.1;Parent=gene-RM610_RS02100;Dbxref=GenBank:WP_037571876.1;Name=WP_037571876.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=RM610_RS02100;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_037571876.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 428319 428924 . - . ID=gene-RM610_RS02105;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=RM610_RS02105;old_locus_tag=RM610_02110 NZ_JAVRJX010000001.1 Protein Homology CDS 428319 428924 . - 0 ID=cds-WP_037571873.1;Parent=gene-RM610_RS02105;Dbxref=GenBank:WP_037571873.1;Name=WP_037571873.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=RM610_RS02105;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_037571873.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 428914 430902 . - . ID=gene-RM610_RS02110;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=RM610_RS02110;old_locus_tag=RM610_02115 NZ_JAVRJX010000001.1 Protein Homology CDS 428914 430902 . - 0 ID=cds-WP_311542017.1;Parent=gene-RM610_RS02110;Dbxref=GenBank:WP_311542017.1;Name=WP_311542017.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=RM610_RS02110;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_311542017.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 430905 431996 . - . ID=gene-RM610_RS02115;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=RM610_RS02115;old_locus_tag=RM610_02120 NZ_JAVRJX010000001.1 Protein Homology CDS 430905 431996 . - 0 ID=cds-WP_107369510.1;Parent=gene-RM610_RS02115;Dbxref=GenBank:WP_107369510.1;Name=WP_107369510.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467596.1;locus_tag=RM610_RS02115;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_107369510.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 432468 432806 . - . ID=gene-RM610_RS02120;Name=RM610_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02120;old_locus_tag=RM610_02125 NZ_JAVRJX010000001.1 Protein Homology CDS 432468 432806 . - 0 ID=cds-WP_311541630.1;Parent=gene-RM610_RS02120;Dbxref=GenBank:WP_311541630.1;Name=WP_311541630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=RM610_RS02120;product=immunoglobulin-like domain-containing protein;protein_id=WP_311541630.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 433013 434158 . + . ID=gene-RM610_RS02125;Name=RM610_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02125;old_locus_tag=RM610_02130 NZ_JAVRJX010000001.1 Protein Homology CDS 433013 434158 . + 0 ID=cds-WP_107359761.1;Parent=gene-RM610_RS02125;Dbxref=GenBank:WP_107359761.1;Name=WP_107359761.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=RM610_RS02125;product=globin domain-containing protein;protein_id=WP_107359761.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 434312 435169 . - . ID=gene-RM610_RS02130;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=RM610_RS02130;old_locus_tag=RM610_02135 NZ_JAVRJX010000001.1 Protein Homology CDS 434312 435169 . - 0 ID=cds-WP_037571861.1;Parent=gene-RM610_RS02130;Dbxref=GenBank:WP_037571861.1;Name=WP_037571861.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=RM610_RS02130;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_037571861.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 435381 435863 . + . ID=gene-RM610_RS02135;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=RM610_RS02135;old_locus_tag=RM610_02140 NZ_JAVRJX010000001.1 Protein Homology CDS 435381 435863 . + 0 ID=cds-WP_107359762.1;Parent=gene-RM610_RS02135;Dbxref=GenBank:WP_107359762.1;Name=WP_107359762.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=RM610_RS02135;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_107359762.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 435850 436974 . + . ID=gene-RM610_RS02140;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=RM610_RS02140;old_locus_tag=RM610_02145 NZ_JAVRJX010000001.1 Protein Homology CDS 435850 436974 . + 0 ID=cds-WP_107381121.1;Parent=gene-RM610_RS02140;Dbxref=GenBank:WP_107381121.1;Name=WP_107381121.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637035.1;locus_tag=RM610_RS02140;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_107381121.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 436974 437681 . + . ID=gene-RM610_RS02145;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=RM610_RS02145;old_locus_tag=RM610_02150 NZ_JAVRJX010000001.1 Protein Homology CDS 436974 437681 . + 0 ID=cds-WP_107381122.1;Parent=gene-RM610_RS02145;Dbxref=GenBank:WP_107381122.1;Name=WP_107381122.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167838.1;locus_tag=RM610_RS02145;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_107381122.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 437683 437952 . + . ID=gene-RM610_RS02150;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=RM610_RS02150;old_locus_tag=RM610_02155 NZ_JAVRJX010000001.1 Protein Homology CDS 437683 437952 . + 0 ID=cds-WP_037571855.1;Parent=gene-RM610_RS02150;Dbxref=GenBank:WP_037571855.1;Name=WP_037571855.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=RM610_RS02150;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_037571855.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 437952 438623 . + . ID=gene-RM610_RS02155;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=RM610_RS02155;old_locus_tag=RM610_02160 NZ_JAVRJX010000001.1 Protein Homology CDS 437952 438623 . + 0 ID=cds-WP_311541631.1;Parent=gene-RM610_RS02155;Dbxref=GenBank:WP_311541631.1;Name=WP_311541631.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=RM610_RS02155;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_311541631.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 438616 440805 . + . ID=gene-RM610_RS02160;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=RM610_RS02160;old_locus_tag=RM610_02165 NZ_JAVRJX010000001.1 Protein Homology CDS 438616 440805 . + 0 ID=cds-WP_311541632.1;Parent=gene-RM610_RS02160;Dbxref=GenBank:WP_311541632.1;Name=WP_311541632.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=RM610_RS02160;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_311541632.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 440784 442205 . + . ID=gene-RM610_RS02165;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=RM610_RS02165;old_locus_tag=RM610_02170 NZ_JAVRJX010000001.1 Protein Homology CDS 440784 442205 . + 0 ID=cds-WP_311541633.1;Parent=gene-RM610_RS02165;Dbxref=GenBank:WP_311541633.1;Name=WP_311541633.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=RM610_RS02165;product=amidophosphoribosyltransferase;protein_id=WP_311541633.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 442210 443238 . + . ID=gene-RM610_RS02170;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=RM610_RS02170;old_locus_tag=RM610_02175 NZ_JAVRJX010000001.1 Protein Homology CDS 442210 443238 . + 0 ID=cds-WP_107375554.1;Parent=gene-RM610_RS02170;Dbxref=GenBank:WP_107375554.1;Name=WP_107375554.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175767.1;locus_tag=RM610_RS02170;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_107375554.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 443241 443807 . + . ID=gene-RM610_RS02175;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=RM610_RS02175;old_locus_tag=RM610_02180 NZ_JAVRJX010000001.1 Protein Homology CDS 443241 443807 . + 0 ID=cds-WP_107369516.1;Parent=gene-RM610_RS02175;Dbxref=GenBank:WP_107369516.1;Name=WP_107369516.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=RM610_RS02175;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_107369516.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 443820 445298 . + . ID=gene-RM610_RS02180;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=RM610_RS02180;old_locus_tag=RM610_02185 NZ_JAVRJX010000001.1 Protein Homology CDS 443820 445298 . + 0 ID=cds-WP_107369517.1;Parent=gene-RM610_RS02180;Dbxref=GenBank:WP_107369517.1;Name=WP_107369517.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462693.1;locus_tag=RM610_RS02180;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_107369517.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 445313 446554 . + . ID=gene-RM610_RS02185;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=RM610_RS02185;old_locus_tag=RM610_02190 NZ_JAVRJX010000001.1 Protein Homology CDS 445313 446554 . + 0 ID=cds-WP_311541634.1;Parent=gene-RM610_RS02185;Dbxref=GenBank:WP_311541634.1;Name=WP_311541634.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448142.1;locus_tag=RM610_RS02185;product=phosphoribosylamine--glycine ligase;protein_id=WP_311541634.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 447366 448157 . - . ID=gene-RM610_RS02190;Name=RM610_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02190;old_locus_tag=RM610_02195 NZ_JAVRJX010000001.1 Protein Homology CDS 447366 448157 . - 0 ID=cds-WP_311541635.1;Parent=gene-RM610_RS02190;Dbxref=GenBank:WP_311541635.1;Name=WP_311541635.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=RM610_RS02190;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_311541635.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 448154 449551 . - . ID=gene-RM610_RS02195;Name=RM610_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02195;old_locus_tag=RM610_02200 NZ_JAVRJX010000001.1 Protein Homology CDS 448154 449551 . - 0 ID=cds-WP_311541636.1;Parent=gene-RM610_RS02195;Dbxref=GenBank:WP_311541636.1;Name=WP_311541636.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=RM610_RS02195;product=ABC transporter ATP-binding protein;protein_id=WP_311541636.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 449564 450145 . - . ID=gene-RM610_RS02200;Name=RM610_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02200;old_locus_tag=RM610_02205 NZ_JAVRJX010000001.1 Protein Homology CDS 449564 450145 . - 0 ID=cds-WP_311541637.1;Parent=gene-RM610_RS02200;Dbxref=GenBank:WP_311541637.1;Name=WP_311541637.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168261.1;locus_tag=RM610_RS02200;product=ECF transporter S component;protein_id=WP_311541637.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 450260 450360 . - . ID=id-NZ_JAVRJX010000001.1:450260..450360;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 450554 450685 . - . ID=gene-RM610_RS02205;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=RM610_RS02205;old_locus_tag=RM610_02210 NZ_JAVRJX010000001.1 Protein Homology CDS 450554 450685 . - 0 ID=cds-WP_194745945.1;Parent=gene-RM610_RS02205;Dbxref=GenBank:WP_194745945.1;Name=WP_194745945.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=RM610_RS02205;product=glycopeptide resistance-associated protein GraF;protein_id=WP_194745945.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 451012 452352 . + . ID=gene-RM610_RS02210;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=RM610_RS02210;old_locus_tag=RM610_02215 NZ_JAVRJX010000001.1 Protein Homology CDS 451012 452352 . + 0 ID=cds-WP_107375558.1;Parent=gene-RM610_RS02210;Dbxref=GenBank:WP_107375558.1;Name=WP_107375558.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424746.1;locus_tag=RM610_RS02210;product=lipoteichoic acid stability factor AuxA;protein_id=WP_107375558.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 452481 453665 . + . ID=gene-RM610_RS02215;Name=RM610_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02215;old_locus_tag=RM610_02220 NZ_JAVRJX010000001.1 Protein Homology CDS 452481 453665 . + 0 ID=cds-WP_311541639.1;Parent=gene-RM610_RS02215;Dbxref=GenBank:WP_311541639.1;Name=WP_311541639.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899956.1;locus_tag=RM610_RS02215;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_311541639.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 453709 454239 . + . ID=gene-RM610_RS02220;Name=RM610_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02220;old_locus_tag=RM610_02225 NZ_JAVRJX010000001.1 Protein Homology CDS 453709 454239 . + 0 ID=cds-WP_107359499.1;Parent=gene-RM610_RS02220;Dbxref=GenBank:WP_107359499.1;Name=WP_107359499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=RM610_RS02220;product=DUF697 domain-containing protein;protein_id=WP_107359499.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 454397 454663 . + . ID=gene-RM610_RS02225;Name=RM610_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02225;old_locus_tag=RM610_02230 NZ_JAVRJX010000001.1 Protein Homology CDS 454397 454663 . + 0 ID=cds-WP_037566021.1;Parent=gene-RM610_RS02225;Dbxref=GenBank:WP_037566021.1;Name=WP_037566021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=RM610_RS02225;product=phosphocarrier protein HPr;protein_id=WP_037566021.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 454663 456384 . + . ID=gene-RM610_RS02230;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=RM610_RS02230;old_locus_tag=RM610_02235 NZ_JAVRJX010000001.1 Protein Homology CDS 454663 456384 . + 0 ID=cds-WP_107359500.1;Parent=gene-RM610_RS02230;Dbxref=GenBank:WP_107359500.1;Name=WP_107359500.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=RM610_RS02230;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_107359500.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 456507 456734 . - . ID=gene-RM610_RS02235;Name=RM610_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02235;old_locus_tag=RM610_02240 NZ_JAVRJX010000001.1 Protein Homology CDS 456507 456734 . - 0 ID=cds-WP_107359501.1;Parent=gene-RM610_RS02235;Dbxref=GenBank:WP_107359501.1;Name=WP_107359501.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289617.1;locus_tag=RM610_RS02235;product=glutaredoxin family protein;protein_id=WP_107359501.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 456957 458309 . + . ID=gene-RM610_RS02240;Name=RM610_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02240;old_locus_tag=RM610_02245 NZ_JAVRJX010000001.1 Protein Homology CDS 456957 458309 . + 0 ID=cds-WP_107521227.1;Parent=gene-RM610_RS02240;Dbxref=GenBank:WP_107521227.1;Name=WP_107521227.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424752.1;locus_tag=RM610_RS02240;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_107521227.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 458306 459325 . + . ID=gene-RM610_RS02245;Name=RM610_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02245;old_locus_tag=RM610_02250 NZ_JAVRJX010000001.1 Protein Homology CDS 458306 459325 . + 0 ID=cds-WP_107375562.1;Parent=gene-RM610_RS02245;Dbxref=GenBank:WP_107375562.1;Name=WP_107375562.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=RM610_RS02245;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_107375562.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 459495 460154 . + . ID=gene-RM610_RS02250;Name=RM610_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02250;old_locus_tag=RM610_02255 NZ_JAVRJX010000001.1 Protein Homology CDS 459495 460154 . + 0 ID=cds-WP_037571801.1;Parent=gene-RM610_RS02250;Dbxref=GenBank:WP_037571801.1;Name=WP_037571801.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=RM610_RS02250;product=potassium channel family protein;protein_id=WP_037571801.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 460248 461930 . - . ID=gene-RM610_RS02255;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=RM610_RS02255;old_locus_tag=RM610_02260 NZ_JAVRJX010000001.1 Protein Homology CDS 460248 461930 . - 0 ID=cds-WP_105986039.1;Parent=gene-RM610_RS02255;Dbxref=GenBank:WP_105986039.1;Name=WP_105986039.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614255.1;locus_tag=RM610_RS02255;product=ribonuclease J1;protein_id=WP_105986039.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 461930 462145 . - . ID=gene-RM610_RS02260;Name=RM610_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02260;old_locus_tag=RM610_02265 NZ_JAVRJX010000001.1 Protein Homology CDS 461930 462145 . - 0 ID=cds-WP_107359505.1;Parent=gene-RM610_RS02260;Dbxref=GenBank:WP_107359505.1;Name=WP_107359505.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=RM610_RS02260;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_107359505.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 462465 462734 . + . ID=gene-RM610_RS02265;Name=RM610_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02265;old_locus_tag=RM610_02270 NZ_JAVRJX010000001.1 Protein Homology CDS 462465 462734 . + 0 ID=cds-WP_107369527.1;Parent=gene-RM610_RS02265;Dbxref=GenBank:WP_107369527.1;Name=WP_107369527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=RM610_RS02265;product=hypothetical protein;protein_id=WP_107369527.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 462796 463347 . - . ID=gene-RM610_RS02270;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM610_RS02270;old_locus_tag=RM610_02275 NZ_JAVRJX010000001.1 Protein Homology CDS 462796 463347 . - 0 ID=cds-WP_311541640.1;Parent=gene-RM610_RS02270;Dbxref=GenBank:WP_311541640.1;Name=WP_311541640.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=RM610_RS02270;product=peptide deformylase;protein_id=WP_311541640.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 463472 464101 . + . ID=gene-RM610_RS02275;Name=RM610_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02275;old_locus_tag=RM610_02280 NZ_JAVRJX010000001.1 Protein Homology CDS 463472 464101 . + 0 ID=cds-WP_107369528.1;Parent=gene-RM610_RS02275;Dbxref=GenBank:WP_107369528.1;Name=WP_107369528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=RM610_RS02275;product=YkyA family protein;protein_id=WP_107369528.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 464262 465374 . + . ID=gene-RM610_RS02280;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=RM610_RS02280;old_locus_tag=RM610_02285 NZ_JAVRJX010000001.1 Protein Homology CDS 464262 465374 . + 0 ID=cds-WP_037571778.1;Parent=gene-RM610_RS02280;Dbxref=GenBank:WP_037571778.1;Name=WP_037571778.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=RM610_RS02280;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_037571778.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 465378 466355 . + . ID=gene-RM610_RS02285;Name=RM610_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02285;old_locus_tag=RM610_02290 NZ_JAVRJX010000001.1 Protein Homology CDS 465378 466355 . + 0 ID=cds-WP_107359508.1;Parent=gene-RM610_RS02285;Dbxref=GenBank:WP_107359508.1;Name=WP_107359508.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=RM610_RS02285;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_107359508.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 466538 467827 . + . ID=gene-RM610_RS02290;Name=RM610_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02290;old_locus_tag=RM610_02295 NZ_JAVRJX010000001.1 Protein Homology CDS 466538 467827 . + 0 ID=cds-WP_107359509.1;Parent=gene-RM610_RS02290;Dbxref=GenBank:WP_107359509.1;Name=WP_107359509.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=RM610_RS02290;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_107359509.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 467831 469237 . + . ID=gene-RM610_RS02295;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM610_RS02295;old_locus_tag=RM610_02300 NZ_JAVRJX010000001.1 Protein Homology CDS 467831 469237 . + 0 ID=cds-WP_105965929.1;Parent=gene-RM610_RS02295;Dbxref=GenBank:WP_105965929.1;Name=WP_105965929.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=RM610_RS02295;product=dihydrolipoyl dehydrogenase;protein_id=WP_105965929.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 469331 469603 . + . ID=gene-RM610_RS02300;Name=RM610_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02300;old_locus_tag=RM610_02305 NZ_JAVRJX010000001.1 Protein Homology CDS 469331 469603 . + 0 ID=cds-WP_107381527.1;Parent=gene-RM610_RS02300;Dbxref=GenBank:WP_107381527.1;Name=WP_107381527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=RM610_RS02300;product=UPF0223 family protein;protein_id=WP_107381527.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 469706 470245 . + . ID=gene-RM610_RS02305;Name=RM610_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02305;old_locus_tag=RM610_02310 NZ_JAVRJX010000001.1 Protein Homology CDS 469706 470245 . + 0 ID=cds-WP_107359511.1;Parent=gene-RM610_RS02305;Dbxref=GenBank:WP_107359511.1;Name=WP_107359511.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=RM610_RS02305;product=helix-turn-helix domain-containing protein;protein_id=WP_107359511.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 470257 471357 . + . ID=gene-RM610_RS02310;Name=RM610_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02310;old_locus_tag=RM610_02315 NZ_JAVRJX010000001.1 Protein Homology CDS 470257 471357 . + 0 ID=cds-WP_105986049.1;Parent=gene-RM610_RS02310;Dbxref=GenBank:WP_105986049.1;Name=WP_105986049.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=RM610_RS02310;product=ABC transporter ATP-binding protein;protein_id=WP_105986049.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 471344 472150 . + . ID=gene-RM610_RS02315;Name=RM610_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02315;old_locus_tag=RM610_02320 NZ_JAVRJX010000001.1 Protein Homology CDS 471344 472150 . + 0 ID=cds-WP_103159435.1;Parent=gene-RM610_RS02315;Dbxref=GenBank:WP_103159435.1;Name=WP_103159435.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=RM610_RS02315;product=ABC transporter permease;protein_id=WP_103159435.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 472147 472959 . + . ID=gene-RM610_RS02320;Name=RM610_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02320;old_locus_tag=RM610_02325 NZ_JAVRJX010000001.1 Protein Homology CDS 472147 472959 . + 0 ID=cds-WP_107375567.1;Parent=gene-RM610_RS02320;Dbxref=GenBank:WP_107375567.1;Name=WP_107375567.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=RM610_RS02320;product=ABC transporter permease;protein_id=WP_107375567.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 472956 474026 . + . ID=gene-RM610_RS02325;Name=RM610_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02325;old_locus_tag=RM610_02330 NZ_JAVRJX010000001.1 Protein Homology CDS 472956 474026 . + 0 ID=cds-WP_311541643.1;Parent=gene-RM610_RS02325;Dbxref=GenBank:WP_311541643.1;Name=WP_311541643.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=RM610_RS02325;product=ABC transporter substrate-binding protein;protein_id=WP_311541643.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 474091 475158 . + . ID=gene-RM610_RS02330;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=RM610_RS02330;old_locus_tag=RM610_02335 NZ_JAVRJX010000001.1 Protein Homology CDS 474091 475158 . + 0 ID=cds-WP_311541644.1;Parent=gene-RM610_RS02330;Dbxref=GenBank:WP_311541644.1;Name=WP_311541644.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614239.1;locus_tag=RM610_RS02330;product=lipoteichoic acid stability factor AuxB;protein_id=WP_311541644.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 475399 476205 . + . ID=gene-RM610_RS02335;Name=RM610_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02335;old_locus_tag=RM610_02340 NZ_JAVRJX010000001.1 Protein Homology CDS 475399 476205 . + 0 ID=cds-WP_241954719.1;Parent=gene-RM610_RS02335;Dbxref=GenBank:WP_241954719.1;Name=WP_241954719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024670.7;locus_tag=RM610_RS02335;product=DUF4064 domain-containing protein;protein_id=WP_241954719.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 476494 477105 . - . ID=gene-RM610_RS02340;Name=RM610_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02340;old_locus_tag=RM610_02345 NZ_JAVRJX010000001.1 Protein Homology CDS 476494 477105 . - 0 ID=cds-WP_311541645.1;Parent=gene-RM610_RS02340;Dbxref=GenBank:WP_311541645.1;Name=WP_311541645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=RM610_RS02340;product=YktB family protein;protein_id=WP_311541645.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 477221 478033 . + . ID=gene-RM610_RS02345;Name=RM610_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02345;old_locus_tag=RM610_02350 NZ_JAVRJX010000001.1 Protein Homology CDS 477221 478033 . + 0 ID=cds-WP_107381344.1;Parent=gene-RM610_RS02345;Dbxref=GenBank:WP_107381344.1;Name=WP_107381344.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480537.1;locus_tag=RM610_RS02345;product=inositol monophosphatase family protein;protein_id=WP_107381344.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 478225 478416 . - . ID=gene-RM610_RS02350;Name=RM610_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02350;old_locus_tag=RM610_02355 NZ_JAVRJX010000001.1 Protein Homology CDS 478225 478416 . - 0 ID=cds-WP_229717287.1;Parent=gene-RM610_RS02350;Dbxref=GenBank:WP_229717287.1;Name=WP_229717287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810616.1;locus_tag=RM610_RS02350;product=DUF5325 family protein;protein_id=WP_229717287.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 478508 480355 . + . ID=gene-RM610_RS02355;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=RM610_RS02355;old_locus_tag=RM610_02360 NZ_JAVRJX010000001.1 Protein Homology CDS 478508 480355 . + 0 ID=cds-WP_105986058.1;Parent=gene-RM610_RS02355;Dbxref=GenBank:WP_105986058.1;Name=WP_105986058.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499605.1;locus_tag=RM610_RS02355;product=translational GTPase TypA;protein_id=WP_105986058.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 480562 481686 . + . ID=gene-RM610_RS02360;Name=RM610_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02360;old_locus_tag=RM610_02365 NZ_JAVRJX010000001.1 Protein Homology CDS 480562 481686 . + 0 ID=cds-WP_194745953.1;Parent=gene-RM610_RS02360;Dbxref=GenBank:WP_194745953.1;Name=WP_194745953.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838043.1;locus_tag=RM610_RS02360;product=NADH-dependent flavin oxidoreductase;protein_id=WP_194745953.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 481935 482132 . - . ID=gene-RM610_RS02365;Name=RM610_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02365;old_locus_tag=RM610_02370 NZ_JAVRJX010000001.1 Protein Homology CDS 481935 482132 . - 0 ID=cds-WP_107359519.1;Parent=gene-RM610_RS02365;Dbxref=GenBank:WP_107359519.1;Name=WP_107359519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472895.1;locus_tag=RM610_RS02365;product=DUF2197 domain-containing protein;protein_id=WP_107359519.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 482133 482615 . - . ID=gene-RM610_RS02370;Name=RM610_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02370;old_locus_tag=RM610_02375 NZ_JAVRJX010000001.1 Protein Homology CDS 482133 482615 . - 0 ID=cds-WP_037571730.1;Parent=gene-RM610_RS02370;Dbxref=GenBank:WP_037571730.1;Name=WP_037571730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499607.1;locus_tag=RM610_RS02370;product=hypothetical protein;protein_id=WP_037571730.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 482751 483026 . + . ID=gene-RM610_RS02375;Name=RM610_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02375;old_locus_tag=RM610_02380 NZ_JAVRJX010000001.1 Protein Homology CDS 482751 483026 . + 0 ID=cds-WP_105986062.1;Parent=gene-RM610_RS02375;Dbxref=GenBank:WP_105986062.1;Name=WP_105986062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830079.1;locus_tag=RM610_RS02375;product=Fpa/YlaN family protein;protein_id=WP_105986062.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 483103 484323 . + . ID=gene-RM610_RS02380;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=RM610_RS02380;old_locus_tag=RM610_02385 NZ_JAVRJX010000001.1 Protein Homology CDS 483103 484323 . + 0 ID=cds-WP_107375572.1;Parent=gene-RM610_RS02380;Dbxref=GenBank:WP_107375572.1;Name=WP_107375572.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424780.1;locus_tag=RM610_RS02380;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_107375572.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 484588 488037 . + . ID=gene-RM610_RS02385;Name=RM610_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02385;old_locus_tag=RM610_02390 NZ_JAVRJX010000001.1 Protein Homology CDS 484588 488037 . + 0 ID=cds-WP_311541646.1;Parent=gene-RM610_RS02385;Dbxref=GenBank:WP_311541646.1;Name=WP_311541646.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499610.1;locus_tag=RM610_RS02385;product=pyruvate carboxylase;protein_id=WP_311541646.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 488092 489000 . - . ID=gene-RM610_RS02390;Name=RM610_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02390;old_locus_tag=RM610_02395 NZ_JAVRJX010000001.1 Protein Homology CDS 488092 489000 . - 0 ID=cds-WP_311541647.1;Parent=gene-RM610_RS02390;Dbxref=GenBank:WP_311541647.1;Name=WP_311541647.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830131.1;locus_tag=RM610_RS02390;product=COX15/CtaA family protein;protein_id=WP_311541647.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 489214 490125 . + . ID=gene-RM610_RS02395;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=RM610_RS02395;old_locus_tag=RM610_02400 NZ_JAVRJX010000001.1 Protein Homology CDS 489214 490125 . + 0 ID=cds-WP_165885766.1;Parent=gene-RM610_RS02395;Dbxref=GenBank:WP_165885766.1;Name=WP_165885766.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168165.1;locus_tag=RM610_RS02395;product=heme o synthase;protein_id=WP_165885766.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 490151 490612 . + . ID=gene-RM610_RS02400;Name=RM610_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02400;old_locus_tag=RM610_02405 NZ_JAVRJX010000001.1 Protein Homology CDS 490151 490612 . + 0 ID=cds-WP_107359524.1;Parent=gene-RM610_RS02400;Dbxref=GenBank:WP_107359524.1;Name=WP_107359524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=RM610_RS02400;product=DUF420 domain-containing protein;protein_id=WP_107359524.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 490738 491811 . + . ID=gene-RM610_RS02405;Name=RM610_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02405;old_locus_tag=RM610_02410 NZ_JAVRJX010000001.1 Protein Homology CDS 490738 491811 . + 0 ID=cds-WP_311541648.1;Parent=gene-RM610_RS02405;Dbxref=GenBank:WP_311541648.1;Name=WP_311541648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424785.1;locus_tag=RM610_RS02405;product=CAP-associated domain-containing protein;protein_id=WP_311541648.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 491804 492241 . + . ID=gene-RM610_RS02410;Name=RM610_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02410;old_locus_tag=RM610_02415 NZ_JAVRJX010000001.1 Protein Homology CDS 491804 492241 . + 0 ID=cds-WP_107369546.1;Parent=gene-RM610_RS02410;Dbxref=GenBank:WP_107369546.1;Name=WP_107369546.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614222.1;locus_tag=RM610_RS02410;product=YlbF/YmcA family competence regulator;protein_id=WP_107369546.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 492423 493331 . - . ID=gene-RM610_RS02415;Name=RM610_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02415;old_locus_tag=RM610_02420 NZ_JAVRJX010000001.1 Protein Homology CDS 492423 493331 . - 0 ID=cds-WP_311541649.1;Parent=gene-RM610_RS02415;Dbxref=GenBank:WP_311541649.1;Name=WP_311541649.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512272.1;locus_tag=RM610_RS02415;product=lysophosphatidylglycerol phospholipase D;protein_id=WP_311541649.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 493420 493668 . + . ID=gene-RM610_RS02420;Name=RM610_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02420;old_locus_tag=RM610_02425 NZ_JAVRJX010000001.1 Protein Homology CDS 493420 493668 . + 0 ID=cds-WP_037571696.1;Parent=gene-RM610_RS02420;Dbxref=GenBank:WP_037571696.1;Name=WP_037571696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469276.1;locus_tag=RM610_RS02420;product=DUF2129 domain-containing protein;protein_id=WP_037571696.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 493669 494058 . - . ID=gene-RM610_RS02425;Name=RM610_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02425;old_locus_tag=RM610_02430 NZ_JAVRJX010000001.1 Protein Homology CDS 493669 494058 . - 0 ID=cds-WP_037571694.1;Parent=gene-RM610_RS02425;Dbxref=GenBank:WP_037571694.1;Name=WP_037571694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=RM610_RS02425;product=DUF7147 family protein;protein_id=WP_037571694.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 494118 494669 . + . ID=gene-RM610_RS02430;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=RM610_RS02430;old_locus_tag=RM610_02435 NZ_JAVRJX010000001.1 Protein Homology CDS 494118 494669 . + 0 ID=cds-WP_107375574.1;Parent=gene-RM610_RS02430;Dbxref=GenBank:WP_107375574.1;Name=WP_107375574.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=RM610_RS02430;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_107375574.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 494662 495156 . + . ID=gene-RM610_RS02435;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=RM610_RS02435;old_locus_tag=RM610_02440 NZ_JAVRJX010000001.1 Protein Homology CDS 494662 495156 . + 0 ID=cds-WP_037571689.1;Parent=gene-RM610_RS02435;Dbxref=GenBank:WP_037571689.1;Name=WP_037571689.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=RM610_RS02435;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_037571689.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 495654 496799 . - . ID=gene-RM610_RS02440;Name=RM610_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02440;old_locus_tag=RM610_02445 NZ_JAVRJX010000001.1 Protein Homology CDS 495654 496799 . - 0 ID=cds-WP_107375575.1;Parent=gene-RM610_RS02440;Dbxref=GenBank:WP_107375575.1;Name=WP_107375575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276103.1;locus_tag=RM610_RS02440;product=nucleotidyltransferase;protein_id=WP_107375575.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 496926 497468 . + . ID=gene-RM610_RS02445;Name=RM610_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02445;old_locus_tag=RM610_02450 NZ_JAVRJX010000001.1 Protein Homology CDS 496926 497468 . + 0 ID=cds-WP_105986073.1;Parent=gene-RM610_RS02445;Dbxref=GenBank:WP_105986073.1;Name=WP_105986073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=RM610_RS02445;product=YceD family protein;protein_id=WP_105986073.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 497511 497684 . + . ID=gene-RM610_RS02450;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=RM610_RS02450;old_locus_tag=RM610_02455 NZ_JAVRJX010000001.1 Protein Homology CDS 497511 497684 . + 0 ID=cds-WP_037571680.1;Parent=gene-RM610_RS02450;Dbxref=GenBank:WP_037571680.1;Name=WP_037571680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=RM610_RS02450;product=50S ribosomal protein L32;protein_id=WP_037571680.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 498306 499052 . + . ID=gene-RM610_RS02455;Name=RM610_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02455;old_locus_tag=RM610_02460 NZ_JAVRJX010000001.1 Protein Homology CDS 498306 499052 . + 0 ID=cds-WP_311541650.1;Parent=gene-RM610_RS02455;Dbxref=GenBank:WP_311541650.1;Name=WP_311541650.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435366.1;locus_tag=RM610_RS02455;product=TrmH family RNA methyltransferase;protein_id=WP_311541650.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 499353 500417 . + . ID=gene-RM610_RS02460;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=RM610_RS02460;old_locus_tag=RM610_02465 NZ_JAVRJX010000001.1 Protein Homology CDS 499353 500417 . + 0 ID=cds-WP_107370175.1;Parent=gene-RM610_RS02460;Dbxref=GenBank:WP_107370175.1;Name=WP_107370175.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499637.1;locus_tag=RM610_RS02460;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_107370175.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 500411 502816 . + . ID=gene-RM610_RS02465;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=RM610_RS02465;old_locus_tag=RM610_02470 NZ_JAVRJX010000001.1 Protein Homology CDS 500411 502816 . + 0 ID=cds-WP_311541651.1;Parent=gene-RM610_RS02465;Dbxref=GenBank:WP_311541651.1;Name=WP_311541651.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=RM610_RS02465;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_311541651.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 503048 503974 . - . ID=gene-RM610_RS02470;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=RM610_RS02470;old_locus_tag=RM610_02475 NZ_JAVRJX010000001.1 Protein Homology CDS 503048 503974 . - 0 ID=cds-WP_311541652.1;Parent=gene-RM610_RS02470;Dbxref=GenBank:WP_311541652.1;Name=WP_311541652.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728969.1;locus_tag=RM610_RS02470;product=ribonuclease HIII;protein_id=WP_311541652.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 504173 504439 . + . ID=gene-RM610_RS02475;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=RM610_RS02475;old_locus_tag=RM610_02480 NZ_JAVRJX010000001.1 Protein Homology CDS 504173 504439 . + 0 ID=cds-WP_037571667.1;Parent=gene-RM610_RS02475;Dbxref=GenBank:WP_037571667.1;Name=WP_037571667.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830081.1;locus_tag=RM610_RS02475;product=cell division protein ZapA;protein_id=WP_037571667.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 504441 504962 . + . ID=gene-RM610_RS02480;Name=RM610_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02480;old_locus_tag=RM610_02485 NZ_JAVRJX010000001.1 Protein Homology CDS 504441 504962 . + 0 ID=cds-WP_107359799.1;Parent=gene-RM610_RS02480;Dbxref=GenBank:WP_107359799.1;Name=WP_107359799.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: protein motif:HMM:NF014704.7;locus_tag=RM610_RS02480;product=CvpA family protein;protein_id=WP_107359799.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 505036 506748 . + . ID=gene-RM610_RS02485;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=RM610_RS02485;old_locus_tag=RM610_02490 NZ_JAVRJX010000001.1 Protein Homology CDS 505036 506748 . + 0 ID=cds-WP_311541653.1;Parent=gene-RM610_RS02485;Dbxref=GenBank:WP_311541653.1;Name=WP_311541653.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365174.1;locus_tag=RM610_RS02485;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_311541653.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 506915 509263 . + . ID=gene-RM610_RS02490;Name=RM610_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02490;old_locus_tag=RM610_02495 NZ_JAVRJX010000001.1 Protein Homology CDS 506915 509263 . + 0 ID=cds-WP_311541654.1;Parent=gene-RM610_RS02490;Dbxref=GenBank:WP_311541654.1;Name=WP_311541654.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=RM610_RS02490;product=endonuclease MutS2;protein_id=WP_311541654.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 509339 509653 . + . ID=gene-RM610_RS02495;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=RM610_RS02495;old_locus_tag=RM610_02500 NZ_JAVRJX010000001.1 Protein Homology CDS 509339 509653 . + 0 ID=cds-WP_105986080.1;Parent=gene-RM610_RS02495;Dbxref=GenBank:WP_105986080.1;Name=WP_105986080.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=RM610_RS02495;product=thioredoxin;protein_id=WP_105986080.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 509779 511569 . + . ID=gene-RM610_RS02500;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=RM610_RS02500;old_locus_tag=RM610_02505 NZ_JAVRJX010000001.1 Protein Homology CDS 509779 511569 . + 0 ID=cds-WP_311541655.1;Parent=gene-RM610_RS02500;Dbxref=GenBank:WP_311541655.1;Name=WP_311541655.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455471.1;locus_tag=RM610_RS02500;product=excinuclease ABC subunit UvrC;protein_id=WP_311541655.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 511728 512339 . + . ID=gene-RM610_RS02505;Name=RM610_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02505;old_locus_tag=RM610_02510 NZ_JAVRJX010000001.1 Protein Homology CDS 511728 512339 . + 0 ID=cds-WP_037571652.1;Parent=gene-RM610_RS02505;Dbxref=GenBank:WP_037571652.1;Name=WP_037571652.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449979.1;locus_tag=RM610_RS02505;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_037571652.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 512458 514224 . + . ID=gene-RM610_RS02510;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=RM610_RS02510;old_locus_tag=RM610_02515 NZ_JAVRJX010000001.1 Protein Homology CDS 512458 514224 . + 0 ID=cds-WP_037571637.1;Parent=gene-RM610_RS02510;Dbxref=GenBank:WP_037571637.1;Name=WP_037571637.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=RM610_RS02510;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_037571637.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 514224 515063 . + . ID=gene-RM610_RS02515;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=RM610_RS02515;old_locus_tag=RM610_02520 NZ_JAVRJX010000001.1 Protein Homology CDS 514224 515063 . + 0 ID=cds-WP_037571633.1;Parent=gene-RM610_RS02515;Dbxref=GenBank:WP_037571633.1;Name=WP_037571633.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507957.1;locus_tag=RM610_RS02515;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_037571633.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 515291 516100 . + . ID=gene-RM610_RS02520;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=RM610_RS02520;old_locus_tag=RM610_02525 NZ_JAVRJX010000001.1 Protein Homology CDS 515291 516100 . + 0 ID=cds-WP_107359794.1;Parent=gene-RM610_RS02520;Dbxref=GenBank:WP_107359794.1;Name=WP_107359794.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424808.1;locus_tag=RM610_RS02520;product=glutamate racemase;protein_id=WP_107359794.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 516104 516688 . + . ID=gene-RM610_RS02525;Name=RM610_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02525;old_locus_tag=RM610_02530 NZ_JAVRJX010000001.1 Protein Homology CDS 516104 516688 . + 0 ID=cds-WP_107376124.1;Parent=gene-RM610_RS02525;Dbxref=GenBank:WP_107376124.1;Name=WP_107376124.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499651.1;locus_tag=RM610_RS02525;product=XTP/dITP diphosphatase;protein_id=WP_107376124.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 516685 517188 . + . ID=gene-RM610_RS02530;Name=RM610_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02530;old_locus_tag=RM610_02535 NZ_JAVRJX010000001.1 Protein Homology CDS 516685 517188 . + 0 ID=cds-WP_107370167.1;Parent=gene-RM610_RS02530;Dbxref=GenBank:WP_107370167.1;Name=WP_107370167.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435133.1;locus_tag=RM610_RS02530;product=YfcE family phosphodiesterase;protein_id=WP_107370167.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 518034 518396 . - . ID=gene-RM610_RS02535;Name=RM610_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02535;old_locus_tag=RM610_02540 NZ_JAVRJX010000001.1 Protein Homology CDS 518034 518396 . - 0 ID=cds-WP_107389438.1;Parent=gene-RM610_RS02535;Dbxref=GenBank:WP_107389438.1;Name=WP_107389438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022980.7;locus_tag=RM610_RS02535;product=complement inhibitor SCIN family protein;protein_id=WP_107389438.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 518781 519356 . + . ID=gene-RM610_RS02540;Name=RM610_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02540;old_locus_tag=RM610_02545 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 518781 519356 . + 0 ID=cds-WP_311541656.1;Parent=gene-RM610_RS02540;Dbxref=GenBank:WP_311541656.1;Name=WP_311541656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS02540;product=hypothetical protein;protein_id=WP_311541656.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 519372 519551 . + . ID=gene-RM610_RS12035;Name=RM610_RS12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12035;partial=true;pseudo=true;start_range=.,519372 NZ_JAVRJX010000001.1 Protein Homology CDS 519372 519551 . + 0 ID=cds-RM610_RS12035;Parent=gene-RM610_RS12035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.8;locus_tag=RM610_RS12035;partial=true;product=M23 family metallopeptidase;pseudo=true;start_range=.,519372;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 519705 520952 . - . ID=gene-RM610_RS02545;Name=RM610_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02545;old_locus_tag=RM610_02550 NZ_JAVRJX010000001.1 Protein Homology CDS 519705 520952 . - 0 ID=cds-WP_311541657.1;Parent=gene-RM610_RS02545;Dbxref=GenBank:WP_311541657.1;Name=WP_311541657.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF014445.7;locus_tag=RM610_RS02545;product=aminoacyltransferase;protein_id=WP_311541657.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 521312 521385 . + . ID=gene-RM610_RS02550;Name=RM610_RS02550;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS02550;old_locus_tag=RM610_02555 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 521312 521385 . + . ID=rna-RM610_RS02550;Parent=gene-RM610_RS02550;anticodon=(pos:521346..521348);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS02550;product=tRNA-Arg NZ_JAVRJX010000001.1 tRNAscan-SE exon 521312 521385 . + . ID=exon-RM610_RS02550-1;Parent=rna-RM610_RS02550;anticodon=(pos:521346..521348);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS02550;product=tRNA-Arg NZ_JAVRJX010000001.1 RefSeq gene 523269 523715 . - . ID=gene-RM610_RS02555;Name=RM610_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02555;old_locus_tag=RM610_02565 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 523269 523715 . - 0 ID=cds-WP_107375717.1;Parent=gene-RM610_RS02555;Dbxref=GenBank:WP_107375717.1;Name=WP_107375717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS02555;product=hypothetical protein;protein_id=WP_107375717.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 523902 524348 . + . ID=gene-RM610_RS02560;Name=RM610_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02560;old_locus_tag=RM610_02570 NZ_JAVRJX010000001.1 Protein Homology CDS 523902 524348 . + 0 ID=cds-WP_107375716.1;Parent=gene-RM610_RS02560;Dbxref=GenBank:WP_107375716.1;Name=WP_107375716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900028.1;locus_tag=RM610_RS02560;product=VOC family protein;protein_id=WP_107375716.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 524396 525700 . - . ID=gene-RM610_RS02565;Name=RM610_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02565;old_locus_tag=RM610_02575 NZ_JAVRJX010000001.1 Protein Homology CDS 524396 525700 . - 0 ID=cds-WP_311541659.1;Parent=gene-RM610_RS02565;Dbxref=GenBank:WP_311541659.1;Name=WP_311541659.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=RM610_RS02565;product=TrkH family potassium uptake protein;protein_id=WP_311541659.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 525904 525978 . - . ID=gene-RM610_RS12040;Name=RM610_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12040 NZ_JAVRJX010000001.1 Protein Homology CDS 525904 525978 . - 0 ID=cds-WP_107359458.1;Parent=gene-RM610_RS12040;Dbxref=GenBank:WP_107359458.1;Name=WP_107359458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=RM610_RS12040;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_107359458.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 526445 526576 . + . ID=gene-RM610_RS02570;Name=RM610_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02570;old_locus_tag=RM610_02580 NZ_JAVRJX010000001.1 Protein Homology CDS 526445 526576 . + 0 ID=cds-WP_069191677.1;Parent=gene-RM610_RS02570;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM610_RS02570;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 526641 526772 . + . ID=gene-RM610_RS02575;Name=RM610_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02575;old_locus_tag=RM610_02585 NZ_JAVRJX010000001.1 Protein Homology CDS 526641 526772 . + 0 ID=cds-WP_069191677.1-2;Parent=gene-RM610_RS02575;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM610_RS02575;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 527020 527475 . - . ID=gene-RM610_RS02580;Name=RM610_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02580;old_locus_tag=RM610_02590 NZ_JAVRJX010000001.1 Protein Homology CDS 527020 527475 . - 0 ID=cds-WP_037573146.1;Parent=gene-RM610_RS02580;Dbxref=GenBank:WP_037573146.1;Name=WP_037573146.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424818.1;locus_tag=RM610_RS02580;product=N-acetyltransferase;protein_id=WP_037573146.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 527899 529512 . + . ID=gene-RM610_RS02585;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=RM610_RS02585;old_locus_tag=RM610_02595 NZ_JAVRJX010000001.1 Protein Homology CDS 527899 529512 . + 0 ID=cds-WP_311541660.1;Parent=gene-RM610_RS02585;Dbxref=GenBank:WP_311541660.1;Name=WP_311541660.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486271.1;locus_tag=RM610_RS02585;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_311541660.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 529657 530088 . + . ID=gene-RM610_RS02590;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=RM610_RS02590;old_locus_tag=RM610_02600 NZ_JAVRJX010000001.1 Protein Homology CDS 529657 530088 . + 0 ID=cds-WP_107359420.1;Parent=gene-RM610_RS02590;Dbxref=GenBank:WP_107359420.1;Name=WP_107359420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=RM610_RS02590;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_107359420.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 530121 531056 . + . ID=gene-RM610_RS02595;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=RM610_RS02595;old_locus_tag=RM610_02605 NZ_JAVRJX010000001.1 Protein Homology CDS 530121 531056 . + 0 ID=cds-WP_311541661.1;Parent=gene-RM610_RS02595;Dbxref=GenBank:WP_311541661.1;Name=WP_311541661.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=RM610_RS02595;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_311541661.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 531074 531493 . + . ID=gene-RM610_RS02600;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=RM610_RS02600;old_locus_tag=RM610_02610 NZ_JAVRJX010000001.1 Protein Homology CDS 531074 531493 . + 0 ID=cds-WP_107369415.1;Parent=gene-RM610_RS02600;Dbxref=GenBank:WP_107369415.1;Name=WP_107369415.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169116.1;locus_tag=RM610_RS02600;product=cell division protein FtsL;protein_id=WP_107369415.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 531474 533615 . + . ID=gene-RM610_RS02605;Name=RM610_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02605;old_locus_tag=RM610_02615 NZ_JAVRJX010000001.1 Protein Homology CDS 531474 533615 . + 0 ID=cds-WP_311541662.1;Parent=gene-RM610_RS02605;Dbxref=GenBank:WP_311541662.1;Name=WP_311541662.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365102.1;locus_tag=RM610_RS02605;product=penicillin-binding protein;protein_id=WP_311541662.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 533782 534747 . + . ID=gene-RM610_RS02610;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=RM610_RS02610;old_locus_tag=RM610_02620 NZ_JAVRJX010000001.1 Protein Homology CDS 533782 534747 . + 0 ID=cds-WP_107375712.1;Parent=gene-RM610_RS02610;Dbxref=GenBank:WP_107375712.1;Name=WP_107375712.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728992.1;locus_tag=RM610_RS02610;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_107375712.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 534748 536097 . + . ID=gene-RM610_RS02615;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=RM610_RS02615;old_locus_tag=RM610_02625 NZ_JAVRJX010000001.1 Protein Homology CDS 534748 536097 . + 0 ID=cds-WP_107375711.1;Parent=gene-RM610_RS02615;Dbxref=GenBank:WP_107375711.1;Name=WP_107375711.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=RM610_RS02615;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_107375711.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 536112 536999 . + . ID=gene-RM610_RS02620;Name=RM610_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02620;old_locus_tag=RM610_02630 NZ_JAVRJX010000001.1 Protein Homology CDS 536112 536999 . + 0 ID=cds-WP_107359426.1;Parent=gene-RM610_RS02620;Dbxref=GenBank:WP_107359426.1;Name=WP_107359426.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169112.1;locus_tag=RM610_RS02620;product=cell division protein FtsQ/DivIB;protein_id=WP_107359426.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 537106 538545 . + . ID=gene-RM610_RS02625;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=RM610_RS02625;old_locus_tag=RM610_02635 NZ_JAVRJX010000001.1 Protein Homology CDS 537106 538545 . + 0 ID=cds-WP_107375709.1;Parent=gene-RM610_RS02625;Dbxref=GenBank:WP_107375709.1;Name=WP_107375709.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500790.1;locus_tag=RM610_RS02625;product=cell division protein FtsA;protein_id=WP_107375709.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 538575 539750 . + . ID=gene-RM610_RS02630;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=RM610_RS02630;old_locus_tag=RM610_02640 NZ_JAVRJX010000001.1 Protein Homology CDS 538575 539750 . + 0 ID=cds-WP_107375708.1;Parent=gene-RM610_RS02630;Dbxref=GenBank:WP_107375708.1;Name=WP_107375708.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169110.1;locus_tag=RM610_RS02630;product=cell division protein FtsZ;protein_id=WP_107375708.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 539911 540702 . + . ID=gene-RM610_RS02635;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=RM610_RS02635;old_locus_tag=RM610_02645 NZ_JAVRJX010000001.1 Protein Homology CDS 539911 540702 . + 0 ID=cds-WP_107375707.1;Parent=gene-RM610_RS02635;Dbxref=GenBank:WP_107375707.1;Name=WP_107375707.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=RM610_RS02635;product=peptidoglycan editing factor PgeF;protein_id=WP_107375707.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 540728 541402 . + . ID=gene-RM610_RS02640;Name=RM610_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02640;old_locus_tag=RM610_02650 NZ_JAVRJX010000001.1 Protein Homology CDS 540728 541402 . + 0 ID=cds-WP_105965231.1;Parent=gene-RM610_RS02640;Dbxref=GenBank:WP_105965231.1;Name=WP_105965231.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174546.1;locus_tag=RM610_RS02640;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_105965231.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 541408 542004 . + . ID=gene-RM610_RS02645;Name=RM610_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02645;old_locus_tag=RM610_02655 NZ_JAVRJX010000001.1 Protein Homology CDS 541408 542004 . + 0 ID=cds-WP_107369423.1;Parent=gene-RM610_RS02645;Dbxref=GenBank:WP_107369423.1;Name=WP_107369423.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507930.1;locus_tag=RM610_RS02645;product=cell division protein SepF;protein_id=WP_107369423.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 542016 542309 . + . ID=gene-RM610_RS02650;Name=RM610_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02650;old_locus_tag=RM610_02660 NZ_JAVRJX010000001.1 Protein Homology CDS 542016 542309 . + 0 ID=cds-WP_107359430.1;Parent=gene-RM610_RS02650;Dbxref=GenBank:WP_107359430.1;Name=WP_107359430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=RM610_RS02650;product=YggT family protein;protein_id=WP_107359430.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 542481 543251 . + . ID=gene-RM610_RS02655;Name=RM610_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02655;old_locus_tag=RM610_02665 NZ_JAVRJX010000001.1 Protein Homology CDS 542481 543251 . + 0 ID=cds-WP_107359431.1;Parent=gene-RM610_RS02655;Dbxref=GenBank:WP_107359431.1;Name=WP_107359431.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=RM610_RS02655;product=YlmH family RNA-binding protein;protein_id=WP_107359431.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 543275 543910 . + . ID=gene-RM610_RS02660;Name=RM610_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02660;old_locus_tag=RM610_02670 NZ_JAVRJX010000001.1 Protein Homology CDS 543275 543910 . + 0 ID=cds-WP_194745974.1;Parent=gene-RM610_RS02660;Dbxref=GenBank:WP_194745974.1;Name=WP_194745974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499698.1;locus_tag=RM610_RS02660;product=DivIVA domain-containing protein;protein_id=WP_194745974.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 544101 546848 . + . ID=gene-RM610_RS02665;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=RM610_RS02665;old_locus_tag=RM610_02675 NZ_JAVRJX010000001.1 Protein Homology CDS 544101 546848 . + 0 ID=cds-WP_311541664.1;Parent=gene-RM610_RS02665;Dbxref=GenBank:WP_311541664.1;Name=WP_311541664.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=RM610_RS02665;product=isoleucine--tRNA ligase;protein_id=WP_311541664.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 547141 547347 . + . ID=gene-RM610_RS02670;Name=RM610_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02670;old_locus_tag=RM610_02680 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 547141 547347 . + 0 ID=cds-WP_105962746.1;Parent=gene-RM610_RS02670;Dbxref=GenBank:WP_105962746.1;Name=WP_105962746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS02670;product=hypothetical protein;protein_id=WP_105962746.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 547468 547947 . + . ID=gene-RM610_RS02675;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=RM610_RS02675;old_locus_tag=RM610_02685 NZ_JAVRJX010000001.1 Protein Homology CDS 547468 547947 . + 0 ID=cds-WP_107359434.1;Parent=gene-RM610_RS02675;Dbxref=GenBank:WP_107359434.1;Name=WP_107359434.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=RM610_RS02675;product=signal peptidase II;protein_id=WP_107359434.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 547957 548874 . + . ID=gene-RM610_RS02680;Name=RM610_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02680;old_locus_tag=RM610_02690 NZ_JAVRJX010000001.1 Protein Homology CDS 547957 548874 . + 0 ID=cds-WP_107375703.1;Parent=gene-RM610_RS02680;Dbxref=GenBank:WP_107375703.1;Name=WP_107375703.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448828.1;locus_tag=RM610_RS02680;product=RluA family pseudouridine synthase;protein_id=WP_107375703.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 549169 549693 . + . ID=gene-RM610_RS02685;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=RM610_RS02685;old_locus_tag=RM610_02695 NZ_JAVRJX010000001.1 Protein Homology CDS 549169 549693 . + 0 ID=cds-WP_037573946.1;Parent=gene-RM610_RS02685;Dbxref=GenBank:WP_037573946.1;Name=WP_037573946.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303315.1;locus_tag=RM610_RS02685;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_037573946.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 549855 551147 . + . ID=gene-RM610_RS02690;Name=RM610_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02690;old_locus_tag=RM610_02700 NZ_JAVRJX010000001.1 Protein Homology CDS 549855 551147 . + 0 ID=cds-WP_311541666.1;Parent=gene-RM610_RS02690;Dbxref=GenBank:WP_311541666.1;Name=WP_311541666.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637156.1;locus_tag=RM610_RS02690;product=uracil-xanthine permease family protein;protein_id=WP_311541666.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 551167 552042 . + . ID=gene-RM610_RS02695;Name=RM610_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02695;old_locus_tag=RM610_02705 NZ_JAVRJX010000001.1 Protein Homology CDS 551167 552042 . + 0 ID=cds-WP_107369428.1;Parent=gene-RM610_RS02695;Dbxref=GenBank:WP_107369428.1;Name=WP_107369428.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016173.1;locus_tag=RM610_RS02695;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_107369428.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 552056 553330 . + . ID=gene-RM610_RS02700;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=RM610_RS02700;old_locus_tag=RM610_02710 NZ_JAVRJX010000001.1 Protein Homology CDS 552056 553330 . + 0 ID=cds-WP_311541667.1;Parent=gene-RM610_RS02700;Dbxref=GenBank:WP_311541667.1;Name=WP_311541667.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=RM610_RS02700;product=dihydroorotase;protein_id=WP_311541667.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 553330 554430 . + . ID=gene-RM610_RS02705;Name=RM610_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02705;old_locus_tag=RM610_02715 NZ_JAVRJX010000001.1 Protein Homology CDS 553330 554430 . + 0 ID=cds-WP_107375700.1;Parent=gene-RM610_RS02705;Dbxref=GenBank:WP_107375700.1;Name=WP_107375700.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167399.1;locus_tag=RM610_RS02705;product=carbamoyl phosphate synthase small subunit;protein_id=WP_107375700.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 554423 557596 . + . ID=gene-RM610_RS02710;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=RM610_RS02710;old_locus_tag=RM610_02720 NZ_JAVRJX010000001.1 Protein Homology CDS 554423 557596 . + 0 ID=cds-WP_311541668.1;Parent=gene-RM610_RS02710;Dbxref=GenBank:WP_311541668.1;Name=WP_311541668.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=RM610_RS02710;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_311541668.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 557609 558373 . + . ID=gene-RM610_RS02715;Name=RM610_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02715;old_locus_tag=RM610_02725 NZ_JAVRJX010000001.1 Protein Homology CDS 557609 558373 . + 0 ID=cds-WP_107381428.1;Parent=gene-RM610_RS02715;Dbxref=GenBank:WP_107381428.1;Name=WP_107381428.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=RM610_RS02715;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_107381428.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 558370 559287 . + . ID=gene-RM610_RS02720;Name=RM610_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02720;old_locus_tag=RM610_02730 NZ_JAVRJX010000001.1 Protein Homology CDS 558370 559287 . + 0 ID=cds-WP_107359442.1;Parent=gene-RM610_RS02720;Dbxref=GenBank:WP_107359442.1;Name=WP_107359442.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=RM610_RS02720;product=dihydroorotate dehydrogenase;protein_id=WP_107359442.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 559291 559983 . + . ID=gene-RM610_RS02725;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=RM610_RS02725;old_locus_tag=RM610_02735 NZ_JAVRJX010000001.1 Protein Homology CDS 559291 559983 . + 0 ID=cds-WP_107359443.1;Parent=gene-RM610_RS02725;Dbxref=GenBank:WP_107359443.1;Name=WP_107359443.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499710.1;locus_tag=RM610_RS02725;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_107359443.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 559983 560591 . + . ID=gene-RM610_RS02730;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=RM610_RS02730;old_locus_tag=RM610_02740 NZ_JAVRJX010000001.1 Protein Homology CDS 559983 560591 . + 0 ID=cds-WP_107359444.1;Parent=gene-RM610_RS02730;Dbxref=GenBank:WP_107359444.1;Name=WP_107359444.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=RM610_RS02730;product=orotate phosphoribosyltransferase;protein_id=WP_107359444.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 560935 561348 . + . ID=gene-RM610_RS02735;Name=RM610_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02735;old_locus_tag=RM610_02745 NZ_JAVRJX010000001.1 Protein Homology CDS 560935 561348 . + 0 ID=cds-WP_105962755.1;Parent=gene-RM610_RS02735;Dbxref=GenBank:WP_105962755.1;Name=WP_105962755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=RM610_RS02735;product=VOC family protein;protein_id=WP_105962755.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 561364 563064 . - . ID=gene-RM610_RS02740;Name=RM610_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02740;old_locus_tag=RM610_02750 NZ_JAVRJX010000001.1 Protein Homology CDS 561364 563064 . - 0 ID=cds-WP_107369432.1;Parent=gene-RM610_RS02740;Dbxref=GenBank:WP_107369432.1;Name=WP_107369432.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167388.1;locus_tag=RM610_RS02740;product=Rqc2 family fibronectin-binding protein;protein_id=WP_107369432.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 563226 563849 . + . ID=gene-RM610_RS02745;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=RM610_RS02745;old_locus_tag=RM610_02755 NZ_JAVRJX010000001.1 Protein Homology CDS 563226 563849 . + 0 ID=cds-WP_107359446.1;Parent=gene-RM610_RS02745;Dbxref=GenBank:WP_107359446.1;Name=WP_107359446.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=RM610_RS02745;product=guanylate kinase;protein_id=WP_107359446.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 563849 564058 . + . ID=gene-RM610_RS02750;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=RM610_RS02750;old_locus_tag=RM610_02760 NZ_JAVRJX010000001.1 Protein Homology CDS 563849 564058 . + 0 ID=cds-WP_037573213.1;Parent=gene-RM610_RS02750;Dbxref=GenBank:WP_037573213.1;Name=WP_037573213.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=RM610_RS02750;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_037573213.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 564237 565457 . + . ID=gene-RM610_RS02755;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=RM610_RS02755;old_locus_tag=RM610_02765 NZ_JAVRJX010000001.1 Protein Homology CDS 564237 565457 . + 0 ID=cds-WP_107359447.1;Parent=gene-RM610_RS02755;Dbxref=GenBank:WP_107359447.1;Name=WP_107359447.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493097.1;locus_tag=RM610_RS02755;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_107359447.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 565454 567865 . + . ID=gene-RM610_RS02760;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=RM610_RS02760;old_locus_tag=RM610_02770 NZ_JAVRJX010000001.1 Protein Homology CDS 565454 567865 . + 0 ID=cds-WP_107375697.1;Parent=gene-RM610_RS02760;Dbxref=GenBank:WP_107375697.1;Name=WP_107375697.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442477.1;locus_tag=RM610_RS02760;product=primosomal protein N';protein_id=WP_107375697.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 568245 568733 . + . ID=gene-RM610_RS02765;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM610_RS02765;old_locus_tag=RM610_02780 NZ_JAVRJX010000001.1 Protein Homology CDS 568245 568733 . + 0 ID=cds-WP_107375696.1;Parent=gene-RM610_RS02765;Dbxref=GenBank:WP_107375696.1;Name=WP_107375696.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303300.1;locus_tag=RM610_RS02765;product=peptide deformylase;protein_id=WP_107375696.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 568720 569658 . + . ID=gene-RM610_RS02770;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=RM610_RS02770;old_locus_tag=RM610_02785 NZ_JAVRJX010000001.1 Protein Homology CDS 568720 569658 . + 0 ID=cds-WP_107359450.1;Parent=gene-RM610_RS02770;Dbxref=GenBank:WP_107359450.1;Name=WP_107359450.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507902.1;locus_tag=RM610_RS02770;product=methionyl-tRNA formyltransferase;protein_id=WP_107359450.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 569659 570969 . + . ID=gene-RM610_RS02775;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=RM610_RS02775;old_locus_tag=RM610_02790 NZ_JAVRJX010000001.1 Protein Homology CDS 569659 570969 . + 0 ID=cds-WP_107375694.1;Parent=gene-RM610_RS02775;Dbxref=GenBank:WP_107375694.1;Name=WP_107375694.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900089.1;locus_tag=RM610_RS02775;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_107375694.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 570966 572060 . + . ID=gene-RM610_RS02780;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=RM610_RS02780;old_locus_tag=RM610_02795 NZ_JAVRJX010000001.1 Protein Homology CDS 570966 572060 . + 0 ID=cds-WP_037573228.1;Parent=gene-RM610_RS02780;Dbxref=GenBank:WP_037573228.1;Name=WP_037573228.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=RM610_RS02780;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_037573228.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 572066 572809 . + . ID=gene-RM610_RS02785;Name=RM610_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02785;old_locus_tag=RM610_02800 NZ_JAVRJX010000001.1 Protein Homology CDS 572066 572809 . + 0 ID=cds-WP_107359452.1;Parent=gene-RM610_RS02785;Dbxref=GenBank:WP_107359452.1;Name=WP_107359452.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=RM610_RS02785;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_107359452.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 572806 574809 . + . ID=gene-RM610_RS02790;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=RM610_RS02790;old_locus_tag=RM610_02805 NZ_JAVRJX010000001.1 Protein Homology CDS 572806 574809 . + 0 ID=cds-WP_311541670.1;Parent=gene-RM610_RS02790;Dbxref=GenBank:WP_311541670.1;Name=WP_311541670.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729014.1;locus_tag=RM610_RS02790;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_311541670.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 574990 576267 . + . ID=gene-RM610_RS02795;Name=RM610_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02795;old_locus_tag=RM610_02810 NZ_JAVRJX010000001.1 Protein Homology CDS 574990 576267 . + 0 ID=cds-WP_107359454.1;Parent=gene-RM610_RS02795;Dbxref=GenBank:WP_107359454.1;Name=WP_107359454.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911561.1;locus_tag=RM610_RS02795;product=cytochrome P450;protein_id=WP_107359454.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 576530 577405 . + . ID=gene-RM610_RS02800;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=RM610_RS02800;old_locus_tag=RM610_02815 NZ_JAVRJX010000001.1 Protein Homology CDS 576530 577405 . + 0 ID=cds-WP_107359455.1;Parent=gene-RM610_RS02800;Dbxref=GenBank:WP_107359455.1;Name=WP_107359455.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=RM610_RS02800;product=ribosome small subunit-dependent GTPase A;protein_id=WP_107359455.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 577405 578055 . + . ID=gene-RM610_RS02805;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=RM610_RS02805;old_locus_tag=RM610_02820 NZ_JAVRJX010000001.1 Protein Homology CDS 577405 578055 . + 0 ID=cds-WP_107375692.1;Parent=gene-RM610_RS02805;Dbxref=GenBank:WP_107375692.1;Name=WP_107375692.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=RM610_RS02805;product=ribulose-phosphate 3-epimerase;protein_id=WP_107375692.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 578059 578694 . + . ID=gene-RM610_RS02810;Name=RM610_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02810;old_locus_tag=RM610_02825 NZ_JAVRJX010000001.1 Protein Homology CDS 578059 578694 . + 0 ID=cds-WP_107369441.1;Parent=gene-RM610_RS02810;Dbxref=GenBank:WP_107369441.1;Name=WP_107369441.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424872.1;locus_tag=RM610_RS02810;product=thiamine diphosphokinase;protein_id=WP_107369441.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 579283 579471 . - . ID=gene-RM610_RS02815;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=RM610_RS02815;old_locus_tag=RM610_02830 NZ_JAVRJX010000001.1 Protein Homology CDS 579283 579471 . - 0 ID=cds-WP_037564748.1;Parent=gene-RM610_RS02815;Dbxref=GenBank:WP_037564748.1;Name=WP_037564748.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=RM610_RS02815;product=50S ribosomal protein L28;protein_id=WP_037564748.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 579880 580254 . + . ID=gene-RM610_RS02820;Name=RM610_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02820;old_locus_tag=RM610_02835 NZ_JAVRJX010000001.1 Protein Homology CDS 579880 580254 . + 0 ID=cds-WP_107359133.1;Parent=gene-RM610_RS02820;Dbxref=GenBank:WP_107359133.1;Name=WP_107359133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=RM610_RS02820;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_107359133.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 580267 581925 . + . ID=gene-RM610_RS02825;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=RM610_RS02825;old_locus_tag=RM610_02840 NZ_JAVRJX010000001.1 Protein Homology CDS 580267 581925 . + 0 ID=cds-WP_107359134.1;Parent=gene-RM610_RS02825;Dbxref=GenBank:WP_107359134.1;Name=WP_107359134.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446265.1;locus_tag=RM610_RS02825;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_107359134.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 582084 582749 . + . ID=gene-RM610_RS02830;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM610_RS02830;old_locus_tag=RM610_02845 NZ_JAVRJX010000001.1 Protein Homology CDS 582084 582749 . + 0 ID=cds-WP_037573246.1;Parent=gene-RM610_RS02830;Dbxref=GenBank:WP_037573246.1;Name=WP_037573246.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303291.1;locus_tag=RM610_RS02830;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_037573246.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 582768 583637 . + . ID=gene-RM610_RS02835;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM610_RS02835;old_locus_tag=RM610_02850 NZ_JAVRJX010000001.1 Protein Homology CDS 582768 583637 . + 0 ID=cds-WP_037573250.1;Parent=gene-RM610_RS02835;Dbxref=GenBank:WP_037573250.1;Name=WP_037573250.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=RM610_RS02835;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_037573250.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 583639 585684 . + . ID=gene-RM610_RS02840;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=RM610_RS02840;old_locus_tag=RM610_02855 NZ_JAVRJX010000001.1 Protein Homology CDS 583639 585684 . + 0 ID=cds-WP_107376115.1;Parent=gene-RM610_RS02840;Dbxref=GenBank:WP_107376115.1;Name=WP_107376115.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=RM610_RS02840;product=ATP-dependent DNA helicase RecG;protein_id=WP_107376115.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 585835 586284 . + . ID=gene-RM610_RS02845;Name=RM610_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02845;old_locus_tag=RM610_02860 NZ_JAVRJX010000001.1 Protein Homology CDS 585835 586284 . + 0 ID=cds-WP_107359137.1;Parent=gene-RM610_RS02845;Dbxref=GenBank:WP_107359137.1;Name=WP_107359137.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF057839.1;locus_tag=RM610_RS02845;product=ASCH domain-containing protein;protein_id=WP_107359137.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 586372 586941 . + . ID=gene-RM610_RS02850;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=RM610_RS02850;old_locus_tag=RM610_02865 NZ_JAVRJX010000001.1 Protein Homology CDS 586372 586941 . + 0 ID=cds-WP_037573258.1;Parent=gene-RM610_RS02850;Dbxref=GenBank:WP_037573258.1;Name=WP_037573258.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174579.1;locus_tag=RM610_RS02850;product=transcription factor FapR;protein_id=WP_037573258.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 586934 587920 . + . ID=gene-RM610_RS02855;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=RM610_RS02855;old_locus_tag=RM610_02870 NZ_JAVRJX010000001.1 Protein Homology CDS 586934 587920 . + 0 ID=cds-WP_107359139.1;Parent=gene-RM610_RS02855;Dbxref=GenBank:WP_107359139.1;Name=WP_107359139.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450581.1;locus_tag=RM610_RS02855;product=phosphate acyltransferase PlsX;protein_id=WP_107359139.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 587913 588839 . + . ID=gene-RM610_RS02860;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=RM610_RS02860;old_locus_tag=RM610_02875 NZ_JAVRJX010000001.1 Protein Homology CDS 587913 588839 . + 0 ID=cds-WP_311541673.1;Parent=gene-RM610_RS02860;Dbxref=GenBank:WP_311541673.1;Name=WP_311541673.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614125.1;locus_tag=RM610_RS02860;product=ACP S-malonyltransferase;protein_id=WP_311541673.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 588832 589569 . + . ID=gene-RM610_RS02865;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=RM610_RS02865;old_locus_tag=RM610_02880 NZ_JAVRJX010000001.1 Protein Homology CDS 588832 589569 . + 0 ID=cds-WP_107359141.1;Parent=gene-RM610_RS02865;Dbxref=GenBank:WP_107359141.1;Name=WP_107359141.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=RM610_RS02865;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_107359141.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 589744 589977 . + . ID=gene-RM610_RS02870;Name=RM610_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02870;old_locus_tag=RM610_02885 NZ_JAVRJX010000001.1 Protein Homology CDS 589744 589977 . + 0 ID=cds-WP_019165520.1;Parent=gene-RM610_RS02870;Dbxref=GenBank:WP_019165520.1;Name=WP_019165520.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=RM610_RS02870;product=acyl carrier protein;protein_id=WP_019165520.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 590146 590817 . + . ID=gene-RM610_RS02875;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=RM610_RS02875;old_locus_tag=RM610_02890 NZ_JAVRJX010000001.1 Protein Homology CDS 590146 590817 . + 0 ID=cds-WP_375712193.1;Parent=gene-RM610_RS02875;Dbxref=GenBank:WP_375712193.1;Name=WP_375712193.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480668.1;locus_tag=RM610_RS02875;product=ribonuclease III;protein_id=WP_375712193.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 590821 594387 . + . ID=gene-RM610_RS02880;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=RM610_RS02880;old_locus_tag=RM610_02895 NZ_JAVRJX010000001.1 Protein Homology CDS 590821 594387 . + 0 ID=cds-WP_311541674.1;Parent=gene-RM610_RS02880;Dbxref=GenBank:WP_311541674.1;Name=WP_311541674.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729018.1;locus_tag=RM610_RS02880;product=chromosome segregation protein SMC;protein_id=WP_311541674.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 594388 595743 . + . ID=gene-RM610_RS02885;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=RM610_RS02885;old_locus_tag=RM610_02900 NZ_JAVRJX010000001.1 Protein Homology CDS 594388 595743 . + 0 ID=cds-WP_119528341.1;Parent=gene-RM610_RS02885;Dbxref=GenBank:WP_119528341.1;Name=WP_119528341.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365083.1;locus_tag=RM610_RS02885;product=signal recognition particle-docking protein FtsY;protein_id=WP_119528341.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 595730 596062 . + . ID=gene-RM610_RS02890;Name=RM610_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02890;old_locus_tag=RM610_02905 NZ_JAVRJX010000001.1 Protein Homology CDS 595730 596062 . + 0 ID=cds-WP_037573283.1;Parent=gene-RM610_RS02890;Dbxref=GenBank:WP_037573283.1;Name=WP_037573283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473260.1;locus_tag=RM610_RS02890;product=putative DNA-binding protein;protein_id=WP_037573283.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 596076 597443 . + . ID=gene-RM610_RS02895;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=RM610_RS02895;old_locus_tag=RM610_02910 NZ_JAVRJX010000001.1 Protein Homology CDS 596076 597443 . + 0 ID=cds-WP_107363468.1;Parent=gene-RM610_RS02895;Dbxref=GenBank:WP_107363468.1;Name=WP_107363468.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=RM610_RS02895;product=signal recognition particle protein;protein_id=WP_107363468.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 597687 597962 . + . ID=gene-RM610_RS02900;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=RM610_RS02900;old_locus_tag=RM610_02915 NZ_JAVRJX010000001.1 Protein Homology CDS 597687 597962 . + 0 ID=cds-WP_105986149.1;Parent=gene-RM610_RS02900;Dbxref=GenBank:WP_105986149.1;Name=WP_105986149.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=RM610_RS02900;product=30S ribosomal protein S16;protein_id=WP_105986149.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 598066 598569 . + . ID=gene-RM610_RS02905;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=RM610_RS02905;old_locus_tag=RM610_02920 NZ_JAVRJX010000001.1 Protein Homology CDS 598066 598569 . + 0 ID=cds-WP_107381220.1;Parent=gene-RM610_RS02905;Dbxref=GenBank:WP_107381220.1;Name=WP_107381220.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=RM610_RS02905;product=ribosome maturation factor RimM;protein_id=WP_107381220.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 598566 599303 . + . ID=gene-RM610_RS02910;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=RM610_RS02910;old_locus_tag=RM610_02925 NZ_JAVRJX010000001.1 Protein Homology CDS 598566 599303 . + 0 ID=cds-WP_311541675.1;Parent=gene-RM610_RS02910;Dbxref=GenBank:WP_311541675.1;Name=WP_311541675.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=RM610_RS02910;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_311541675.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 599405 599755 . + . ID=gene-RM610_RS02915;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=RM610_RS02915;old_locus_tag=RM610_02930 NZ_JAVRJX010000001.1 Protein Homology CDS 599405 599755 . + 0 ID=cds-WP_037573298.1;Parent=gene-RM610_RS02915;Dbxref=GenBank:WP_037573298.1;Name=WP_037573298.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=RM610_RS02915;product=50S ribosomal protein L19;protein_id=WP_037573298.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 600150 600701 . + . ID=gene-RM610_RS02920;Name=RM610_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02920;old_locus_tag=RM610_02935 NZ_JAVRJX010000001.1 Protein Homology CDS 600150 600701 . + 0 ID=cds-WP_311541676.1;Parent=gene-RM610_RS02920;Dbxref=GenBank:WP_311541676.1;Name=WP_311541676.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: protein motif:HMM:NF013718.7;locus_tag=RM610_RS02920;product=phosphatase PAP2 family protein;protein_id=WP_311541676.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 600755 603340 . - . ID=gene-RM610_RS02925;Name=RM610_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02925;old_locus_tag=RM610_02940 NZ_JAVRJX010000001.1 Protein Homology CDS 600755 603340 . - 0 ID=cds-WP_311541677.1;Parent=gene-RM610_RS02925;Dbxref=GenBank:WP_311541677.1;Name=WP_311541677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729034.1;locus_tag=RM610_RS02925;product=YfhO family protein;protein_id=WP_311541677.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 603337 605943 . - . ID=gene-RM610_RS02930;Name=RM610_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02930;old_locus_tag=RM610_02945 NZ_JAVRJX010000001.1 Protein Homology CDS 603337 605943 . - 0 ID=cds-WP_311541679.1;Parent=gene-RM610_RS02930;Dbxref=GenBank:WP_311541679.1;Name=WP_311541679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=RM610_RS02930;product=YfhO family protein;protein_id=WP_311541679.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 605962 606324 . - . ID=gene-RM610_RS02935;Name=RM610_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02935;old_locus_tag=RM610_02950 NZ_JAVRJX010000001.1 Protein Homology CDS 605962 606324 . - 0 ID=cds-WP_037573953.1;Parent=gene-RM610_RS02935;Dbxref=GenBank:WP_037573953.1;Name=WP_037573953.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=RM610_RS02935;product=GtrA family protein;protein_id=WP_037573953.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 606556 607446 . + . ID=gene-RM610_RS02940;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=RM610_RS02940;old_locus_tag=RM610_02955 NZ_JAVRJX010000001.1 Protein Homology CDS 606556 607446 . + 0 ID=cds-WP_311541680.1;Parent=gene-RM610_RS02940;Dbxref=GenBank:WP_311541680.1;Name=WP_311541680.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448797.1;locus_tag=RM610_RS02940;product=ribosome biogenesis GTPase YlqF;protein_id=WP_311541680.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 607427 608206 . + . ID=gene-RM610_RS02945;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=RM610_RS02945;old_locus_tag=RM610_02960 NZ_JAVRJX010000001.1 Protein Homology CDS 607427 608206 . + 0 ID=cds-WP_107369453.1;Parent=gene-RM610_RS02945;Dbxref=GenBank:WP_107369453.1;Name=WP_107369453.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=RM610_RS02945;product=ribonuclease HII;protein_id=WP_107369453.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 608285 608554 . + . ID=gene-RM610_RS02950;Name=RM610_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS02950;old_locus_tag=RM610_02965 NZ_JAVRJX010000001.1 Protein Homology CDS 608285 608554 . + 0 ID=cds-WP_105986155.1;Parent=gene-RM610_RS02950;Dbxref=GenBank:WP_105986155.1;Name=WP_105986155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424899.1;locus_tag=RM610_RS02950;product=hypothetical protein;protein_id=WP_105986155.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 608779 609945 . + . ID=gene-RM610_RS02955;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=RM610_RS02955;old_locus_tag=RM610_02970 NZ_JAVRJX010000001.1 Protein Homology CDS 608779 609945 . + 0 ID=cds-WP_105986156.1;Parent=gene-RM610_RS02955;Dbxref=GenBank:WP_105986156.1;Name=WP_105986156.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=RM610_RS02955;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_105986156.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 609966 610874 . + . ID=gene-RM610_RS02960;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=RM610_RS02960;old_locus_tag=RM610_02975 NZ_JAVRJX010000001.1 Protein Homology CDS 609966 610874 . + 0 ID=cds-WP_037573316.1;Parent=gene-RM610_RS02960;Dbxref=GenBank:WP_037573316.1;Name=WP_037573316.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499754.1;locus_tag=RM610_RS02960;product=succinate--CoA ligase subunit alpha;protein_id=WP_037573316.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 611188 612048 . + . ID=gene-RM610_RS02965;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=RM610_RS02965;old_locus_tag=RM610_02980 NZ_JAVRJX010000001.1 Protein Homology CDS 611188 612048 . + 0 ID=cds-WP_311542018.1;Parent=gene-RM610_RS02965;Dbxref=GenBank:WP_311542018.1;Name=WP_311542018.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167869.1;locus_tag=RM610_RS02965;product=DNA-processing protein DprA;protein_id=WP_311542018.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 612144 614213 . + . ID=gene-RM610_RS02970;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=RM610_RS02970;old_locus_tag=RM610_02985 NZ_JAVRJX010000001.1 Protein Homology CDS 612144 614213 . + 0 ID=cds-WP_311541681.1;Parent=gene-RM610_RS02970;Dbxref=GenBank:WP_311541681.1;Name=WP_311541681.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=RM610_RS02970;product=type I DNA topoisomerase;protein_id=WP_311541681.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 614226 615530 . + . ID=gene-RM610_RS02975;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=RM610_RS02975;old_locus_tag=RM610_02990 NZ_JAVRJX010000001.1 Protein Homology CDS 614226 615530 . + 0 ID=cds-WP_311541682.1;Parent=gene-RM610_RS02975;Dbxref=GenBank:WP_311541682.1;Name=WP_311541682.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=RM610_RS02975;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_311541682.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 615682 616542 . + . ID=gene-RM610_RS02980;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=RM610_RS02980;old_locus_tag=RM610_02995 NZ_JAVRJX010000001.1 Protein Homology CDS 615682 616542 . + 0 ID=cds-WP_375712194.1;Parent=gene-RM610_RS02980;Dbxref=GenBank:WP_375712194.1;Name=WP_375712194.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464326.1;locus_tag=RM610_RS02980;product=tyrosine recombinase XerC;protein_id=WP_375712194.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 616548 617090 . + . ID=gene-RM610_RS02985;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=RM610_RS02985;old_locus_tag=RM610_03000 NZ_JAVRJX010000001.1 Protein Homology CDS 616548 617090 . + 0 ID=cds-WP_037573327.1;Parent=gene-RM610_RS02985;Dbxref=GenBank:WP_037573327.1;Name=WP_037573327.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=RM610_RS02985;product=ATP-dependent protease subunit HslV;protein_id=WP_037573327.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 617107 618516 . + . ID=gene-RM610_RS02990;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=RM610_RS02990;old_locus_tag=RM610_03005 NZ_JAVRJX010000001.1 Protein Homology CDS 617107 618516 . + 0 ID=cds-WP_107381821.1;Parent=gene-RM610_RS02990;Dbxref=GenBank:WP_107381821.1;Name=WP_107381821.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=RM610_RS02990;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_107381821.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 618531 619304 . + . ID=gene-RM610_RS02995;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=RM610_RS02995;old_locus_tag=RM610_03010 NZ_JAVRJX010000001.1 Protein Homology CDS 618531 619304 . + 0 ID=cds-WP_107359156.1;Parent=gene-RM610_RS02995;Dbxref=GenBank:WP_107359156.1;Name=WP_107359156.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=RM610_RS02995;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_107359156.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 619466 620239 . + . ID=gene-RM610_RS03000;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=RM610_RS03000;old_locus_tag=RM610_03015 NZ_JAVRJX010000001.1 Protein Homology CDS 619466 620239 . + 0 ID=cds-WP_107381280.1;Parent=gene-RM610_RS03000;Dbxref=GenBank:WP_107381280.1;Name=WP_107381280.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=RM610_RS03000;product=30S ribosomal protein S2;protein_id=WP_107381280.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 620453 621334 . + . ID=gene-RM610_RS03005;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=RM610_RS03005;old_locus_tag=RM610_03020 NZ_JAVRJX010000001.1 Protein Homology CDS 620453 621334 . + 0 ID=cds-WP_182472242.1;Parent=gene-RM610_RS03005;Dbxref=GenBank:WP_182472242.1;Name=WP_182472242.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499767.1;locus_tag=RM610_RS03005;product=translation elongation factor Ts;protein_id=WP_182472242.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 621488 622210 . + . ID=gene-RM610_RS03010;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=RM610_RS03010;old_locus_tag=RM610_03025 NZ_JAVRJX010000001.1 Protein Homology CDS 621488 622210 . + 0 ID=cds-WP_037573342.1;Parent=gene-RM610_RS03010;Dbxref=GenBank:WP_037573342.1;Name=WP_037573342.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499768.1;locus_tag=RM610_RS03010;product=UMP kinase;protein_id=WP_037573342.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 622230 622784 . + . ID=gene-RM610_RS03015;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=RM610_RS03015;old_locus_tag=RM610_03030 NZ_JAVRJX010000001.1 Protein Homology CDS 622230 622784 . + 0 ID=cds-WP_107375668.1;Parent=gene-RM610_RS03015;Dbxref=GenBank:WP_107375668.1;Name=WP_107375668.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=RM610_RS03015;product=ribosome recycling factor;protein_id=WP_107375668.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 622934 623695 . + . ID=gene-RM610_RS03020;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=RM610_RS03020;old_locus_tag=RM610_03035 NZ_JAVRJX010000001.1 Protein Homology CDS 622934 623695 . + 0 ID=cds-WP_107381279.1;Parent=gene-RM610_RS03020;Dbxref=GenBank:WP_107381279.1;Name=WP_107381279.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=RM610_RS03020;product=undecaprenyl pyrophosphate synthase;protein_id=WP_107381279.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 623709 624488 . + . ID=gene-RM610_RS03025;Name=RM610_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03025;old_locus_tag=RM610_03040 NZ_JAVRJX010000001.1 Protein Homology CDS 623709 624488 . + 0 ID=cds-WP_037573352.1;Parent=gene-RM610_RS03025;Dbxref=GenBank:WP_037573352.1;Name=WP_037573352.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=RM610_RS03025;product=phosphatidate cytidylyltransferase;protein_id=WP_037573352.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 624504 625634 . + . ID=gene-RM610_RS03030;Name=RM610_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03030;old_locus_tag=RM610_03045 NZ_JAVRJX010000001.1 Protein Homology CDS 624504 625634 . + 0 ID=cds-WP_107381281.1;Parent=gene-RM610_RS03030;Dbxref=GenBank:WP_107381281.1;Name=WP_107381281.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381738.1;locus_tag=RM610_RS03030;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_107381281.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 625641 626921 . + . ID=gene-RM610_RS03035;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=RM610_RS03035;old_locus_tag=RM610_03050 NZ_JAVRJX010000001.1 Protein Homology CDS 625641 626921 . + 0 ID=cds-WP_311541683.1;Parent=gene-RM610_RS03035;Dbxref=GenBank:WP_311541683.1;Name=WP_311541683.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=RM610_RS03035;product=RIP metalloprotease RseP;protein_id=WP_311541683.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 626949 628655 . + . ID=gene-RM610_RS03040;Name=RM610_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03040;old_locus_tag=RM610_03055 NZ_JAVRJX010000001.1 Protein Homology CDS 626949 628655 . + 0 ID=cds-WP_311541684.1;Parent=gene-RM610_RS03040;Dbxref=GenBank:WP_311541684.1;Name=WP_311541684.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453094.1;locus_tag=RM610_RS03040;product=proline--tRNA ligase;protein_id=WP_311541684.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 628852 633162 . + . ID=gene-RM610_RS03045;Name=RM610_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03045;old_locus_tag=RM610_03060 NZ_JAVRJX010000001.1 Protein Homology CDS 628852 633162 . + 0 ID=cds-WP_107389493.1;Parent=gene-RM610_RS03045;Dbxref=GenBank:WP_107389493.1;Name=WP_107389493.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303258.1;locus_tag=RM610_RS03045;product=PolC-type DNA polymerase III;protein_id=WP_107389493.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 633289 633756 . + . ID=gene-RM610_RS03050;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=RM610_RS03050;old_locus_tag=RM610_03065 NZ_JAVRJX010000001.1 Protein Homology CDS 633289 633756 . + 0 ID=cds-WP_311541685.1;Parent=gene-RM610_RS03050;Dbxref=GenBank:WP_311541685.1;Name=WP_311541685.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=RM610_RS03050;product=ribosome maturation factor RimP;protein_id=WP_311541685.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 633776 634951 . + . ID=gene-RM610_RS03055;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=RM610_RS03055;old_locus_tag=RM610_03070 NZ_JAVRJX010000001.1 Protein Homology CDS 633776 634951 . + 0 ID=cds-WP_107369991.1;Parent=gene-RM610_RS03055;Dbxref=GenBank:WP_107369991.1;Name=WP_107369991.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729050.1;locus_tag=RM610_RS03055;product=transcription termination factor NusA;protein_id=WP_107369991.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 634965 635252 . + . ID=gene-RM610_RS03060;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=RM610_RS03060;old_locus_tag=RM610_03075 NZ_JAVRJX010000001.1 Protein Homology CDS 634965 635252 . + 0 ID=cds-WP_037573364.1;Parent=gene-RM610_RS03060;Dbxref=GenBank:WP_037573364.1;Name=WP_037573364.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=RM610_RS03060;product=RNase P modulator RnpM;protein_id=WP_037573364.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 635249 635554 . + . ID=gene-RM610_RS03065;Name=RM610_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03065;old_locus_tag=RM610_03080 NZ_JAVRJX010000001.1 Protein Homology CDS 635249 635554 . + 0 ID=cds-WP_037573366.1;Parent=gene-RM610_RS03065;Dbxref=GenBank:WP_037573366.1;Name=WP_037573366.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=RM610_RS03065;product=YlxQ family RNA-binding protein;protein_id=WP_037573366.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 635571 637718 . + . ID=gene-RM610_RS03070;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=RM610_RS03070;old_locus_tag=RM610_03085 NZ_JAVRJX010000001.1 Protein Homology CDS 635571 637718 . + 0 ID=cds-WP_311541686.1;Parent=gene-RM610_RS03070;Dbxref=GenBank:WP_311541686.1;Name=WP_311541686.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898111.1;locus_tag=RM610_RS03070;product=translation initiation factor IF-2;protein_id=WP_311541686.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 637915 638298 . + . ID=gene-RM610_RS03075;Name=RM610_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03075;old_locus_tag=RM610_03090 NZ_JAVRJX010000001.1 Protein Homology CDS 637915 638298 . + 0 ID=cds-WP_311541687.1;Parent=gene-RM610_RS03075;Dbxref=GenBank:WP_311541687.1;Name=WP_311541687.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480708.1;locus_tag=RM610_RS03075;product=VOC family protein;protein_id=WP_311541687.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 638397 638741 . + . ID=gene-RM610_RS03080;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=RM610_RS03080;old_locus_tag=RM610_03095 NZ_JAVRJX010000001.1 Protein Homology CDS 638397 638741 . + 0 ID=cds-WP_037573372.1;Parent=gene-RM610_RS03080;Dbxref=GenBank:WP_037573372.1;Name=WP_037573372.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=RM610_RS03080;product=30S ribosome-binding factor RbfA;protein_id=WP_037573372.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 638813 639730 . + . ID=gene-RM610_RS03085;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=RM610_RS03085;old_locus_tag=RM610_03100 NZ_JAVRJX010000001.1 Protein Homology CDS 638813 639730 . + 0 ID=cds-WP_311541688.1;Parent=gene-RM610_RS03085;Dbxref=GenBank:WP_311541688.1;Name=WP_311541688.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=RM610_RS03085;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_311541688.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 639745 640716 . + . ID=gene-RM610_RS03090;Name=RM610_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03090;old_locus_tag=RM610_03105 NZ_JAVRJX010000001.1 Protein Homology CDS 639745 640716 . + 0 ID=cds-WP_107359165.1;Parent=gene-RM610_RS03090;Dbxref=GenBank:WP_107359165.1;Name=WP_107359165.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009558826.1;locus_tag=RM610_RS03090;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_107359165.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 640820 641089 . + . ID=gene-RM610_RS03095;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=RM610_RS03095;old_locus_tag=RM610_03110 NZ_JAVRJX010000001.1 Protein Homology CDS 640820 641089 . + 0 ID=cds-WP_037573379.1;Parent=gene-RM610_RS03095;Dbxref=GenBank:WP_037573379.1;Name=WP_037573379.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=RM610_RS03095;product=30S ribosomal protein S15;protein_id=WP_037573379.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 641253 643358 . + . ID=gene-RM610_RS03100;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=RM610_RS03100;old_locus_tag=RM610_03115 NZ_JAVRJX010000001.1 Protein Homology CDS 641253 643358 . + 0 ID=cds-WP_107369996.1;Parent=gene-RM610_RS03100;Dbxref=GenBank:WP_107369996.1;Name=WP_107369996.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900164.1;locus_tag=RM610_RS03100;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_107369996.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 643797 644114 . + . ID=gene-RM610_RS03105;Name=RM610_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03105;old_locus_tag=RM610_03120 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 643797 644114 . + 0 ID=cds-WP_311541689.1;Parent=gene-RM610_RS03105;Dbxref=GenBank:WP_311541689.1;Name=WP_311541689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS03105;product=hypothetical protein;protein_id=WP_311541689.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 644296 644898 . + . ID=gene-RM610_RS03110;Name=RM610_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03110;old_locus_tag=RM610_03125 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 644296 644898 . + 0 ID=cds-WP_241955473.1;Parent=gene-RM610_RS03110;Dbxref=GenBank:WP_241955473.1;Name=WP_241955473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS03110;product=M30 family metallopeptidase;protein_id=WP_241955473.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 645215 646888 . + . ID=gene-RM610_RS03115;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=RM610_RS03115;old_locus_tag=RM610_03130 NZ_JAVRJX010000001.1 Protein Homology CDS 645215 646888 . + 0 ID=cds-WP_037573383.1;Parent=gene-RM610_RS03115;Dbxref=GenBank:WP_037573383.1;Name=WP_037573383.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=RM610_RS03115;product=ribonuclease J2;protein_id=WP_037573383.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 647122 649473 . + . ID=gene-RM610_RS03120;Name=RM610_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03120;old_locus_tag=RM610_03135 NZ_JAVRJX010000001.1 Protein Homology CDS 647122 649473 . + 0 ID=cds-WP_107359167.1;Parent=gene-RM610_RS03120;Dbxref=GenBank:WP_107359167.1;Name=WP_107359167.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165454.1;locus_tag=RM610_RS03120;product=DNA translocase FtsK;protein_id=WP_107359167.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 649476 650192 . + . ID=gene-RM610_RS03125;Name=RM610_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03125;old_locus_tag=RM610_03140 NZ_JAVRJX010000001.1 Protein Homology CDS 649476 650192 . + 0 ID=cds-WP_107359168.1;Parent=gene-RM610_RS03125;Dbxref=GenBank:WP_107359168.1;Name=WP_107359168.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=RM610_RS03125;product=GntR family transcriptional regulator;protein_id=WP_107359168.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 650223 651497 . + . ID=gene-RM610_RS03130;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=RM610_RS03130;old_locus_tag=RM610_03145 NZ_JAVRJX010000001.1 Protein Homology CDS 650223 651497 . + 0 ID=cds-WP_311541691.1;Parent=gene-RM610_RS03130;Dbxref=GenBank:WP_311541691.1;Name=WP_311541691.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=RM610_RS03130;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_311541691.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 651490 652776 . + . ID=gene-RM610_RS03135;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=RM610_RS03135;old_locus_tag=RM610_03150 NZ_JAVRJX010000001.1 Protein Homology CDS 651490 652776 . + 0 ID=cds-WP_107359169.1;Parent=gene-RM610_RS03135;Dbxref=GenBank:WP_107359169.1;Name=WP_107359169.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638356.1;locus_tag=RM610_RS03135;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_107359169.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 652776 653480 . + . ID=gene-RM610_RS03140;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=RM610_RS03140;old_locus_tag=RM610_03155 NZ_JAVRJX010000001.1 Protein Homology CDS 652776 653480 . + 0 ID=cds-WP_107370000.1;Parent=gene-RM610_RS03140;Dbxref=GenBank:WP_107370000.1;Name=WP_107370000.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662935.1;locus_tag=RM610_RS03140;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_107370000.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 653532 654401 . + . ID=gene-RM610_RS03145;Name=RM610_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03145;old_locus_tag=RM610_03160 NZ_JAVRJX010000001.1 Protein Homology CDS 653532 654401 . + 0 ID=cds-WP_037573391.1;Parent=gene-RM610_RS03145;Dbxref=GenBank:WP_037573391.1;Name=WP_037573391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381771.1;locus_tag=RM610_RS03145;product=DUF3388 domain-containing protein;protein_id=WP_037573391.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 654414 654809 . + . ID=gene-RM610_RS03150;Name=RM610_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03150;old_locus_tag=RM610_03165 NZ_JAVRJX010000001.1 Protein Homology CDS 654414 654809 . + 0 ID=cds-WP_107359172.1;Parent=gene-RM610_RS03150;Dbxref=GenBank:WP_107359172.1;Name=WP_107359172.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024805.7;locus_tag=RM610_RS03150;product=helix-turn-helix domain-containing protein;protein_id=WP_107359172.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 654850 655434 . + . ID=gene-RM610_RS03155;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=RM610_RS03155;old_locus_tag=RM610_03170 NZ_JAVRJX010000001.1 Protein Homology CDS 654850 655434 . + 0 ID=cds-WP_311541692.1;Parent=gene-RM610_RS03155;Dbxref=GenBank:WP_311541692.1;Name=WP_311541692.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=RM610_RS03155;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_311541692.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 655541 656692 . + . ID=gene-RM610_RS03160;Name=RM610_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03160;old_locus_tag=RM610_03175 NZ_JAVRJX010000001.1 Protein Homology CDS 655541 656692 . + 0 ID=cds-WP_311541694.1;Parent=gene-RM610_RS03160;Dbxref=GenBank:WP_311541694.1;Name=WP_311541694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442605.1;locus_tag=RM610_RS03160;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_311541694.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 656855 657898 . + . ID=gene-RM610_RS03165;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=RM610_RS03165;old_locus_tag=RM610_03180 NZ_JAVRJX010000001.1 Protein Homology CDS 656855 657898 . + 0 ID=cds-WP_037573405.1;Parent=gene-RM610_RS03165;Dbxref=GenBank:WP_037573405.1;Name=WP_037573405.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=RM610_RS03165;product=recombinase RecA;protein_id=WP_037573405.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 658441 660000 . + . ID=gene-RM610_RS03170;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=RM610_RS03170;old_locus_tag=RM610_03185 NZ_JAVRJX010000001.1 Protein Homology CDS 658441 660000 . + 0 ID=cds-WP_311541695.1;Parent=gene-RM610_RS03170;Dbxref=GenBank:WP_311541695.1;Name=WP_311541695.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=RM610_RS03170;product=ribonuclease Y;protein_id=WP_311541695.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 660072 660290 . - . ID=gene-RM610_RS03175;Name=RM610_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03175;old_locus_tag=RM610_03190 NZ_JAVRJX010000001.1 Protein Homology CDS 660072 660290 . - 0 ID=cds-WP_037573959.1;Parent=gene-RM610_RS03175;Dbxref=GenBank:WP_037573959.1;Name=WP_037573959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483434.1;locus_tag=RM610_RS03175;product=hypothetical protein;protein_id=WP_037573959.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 660492 660878 . + . ID=gene-RM610_RS03180;Name=RM610_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03180;old_locus_tag=RM610_03195 NZ_JAVRJX010000001.1 Protein Homology CDS 660492 660878 . + 0 ID=cds-WP_037573409.1;Parent=gene-RM610_RS03180;Dbxref=GenBank:WP_037573409.1;Name=WP_037573409.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=RM610_RS03180;product=ArsR/SmtB family transcription factor;protein_id=WP_037573409.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 660856 662997 . + . ID=gene-RM610_RS03185;Name=RM610_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03185;old_locus_tag=RM610_03200 NZ_JAVRJX010000001.1 Protein Homology CDS 660856 662997 . + 0 ID=cds-WP_311541697.1;Parent=gene-RM610_RS03185;Dbxref=GenBank:WP_311541697.1;Name=WP_311541697.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016838775.1;locus_tag=RM610_RS03185;product=heavy metal translocating P-type ATPase;protein_id=WP_311541697.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 663103 663894 . + . ID=gene-RM610_RS03190;Name=RM610_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03190;old_locus_tag=RM610_03205 NZ_JAVRJX010000001.1 Protein Homology CDS 663103 663894 . + 0 ID=cds-WP_037573411.1;Parent=gene-RM610_RS03190;Dbxref=GenBank:WP_037573411.1;Name=WP_037573411.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275911.1;locus_tag=RM610_RS03190;product=TIGR00282 family metallophosphoesterase;protein_id=WP_037573411.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 664007 665764 . + . ID=gene-RM610_RS03195;Name=RM610_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03195;old_locus_tag=RM610_03210 NZ_JAVRJX010000001.1 Protein Homology CDS 664007 665764 . + 0 ID=cds-WP_107381058.1;Parent=gene-RM610_RS03195;Dbxref=GenBank:WP_107381058.1;Name=WP_107381058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=RM610_RS03195;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_107381058.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 665765 666631 . + . ID=gene-RM610_RS03200;Name=RM610_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03200;old_locus_tag=RM610_03215 NZ_JAVRJX010000001.1 Protein Homology CDS 665765 666631 . + 0 ID=cds-WP_107359177.1;Parent=gene-RM610_RS03200;Dbxref=GenBank:WP_107359177.1;Name=WP_107359177.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=RM610_RS03200;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_107359177.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 667212 667508 . + . ID=gene-RM610_RS03205;Name=RM610_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03205;old_locus_tag=RM610_03220 NZ_JAVRJX010000001.1 Protein Homology CDS 667212 667508 . + 0 ID=cds-WP_107359178.1;Parent=gene-RM610_RS03205;Dbxref=GenBank:WP_107359178.1;Name=WP_107359178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453122.1;locus_tag=RM610_RS03205;product=thiamine-binding protein;protein_id=WP_107359178.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 667647 669188 . + . ID=gene-RM610_RS03210;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=RM610_RS03210;old_locus_tag=RM610_03225 NZ_JAVRJX010000001.1 Protein Homology CDS 667647 669188 . + 0 ID=cds-WP_107359179.1;Parent=gene-RM610_RS03210;Dbxref=GenBank:WP_107359179.1;Name=WP_107359179.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167791.1;locus_tag=RM610_RS03210;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_107359179.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 669188 669568 . + . ID=gene-RM610_RS03215;Name=RM610_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03215;old_locus_tag=RM610_03230 NZ_JAVRJX010000001.1 Protein Homology CDS 669188 669568 . + 0 ID=cds-WP_107359180.1;Parent=gene-RM610_RS03215;Dbxref=GenBank:WP_107359180.1;Name=WP_107359180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=RM610_RS03215;product=YlbF family regulator;protein_id=WP_107359180.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 669573 670082 . + . ID=gene-RM610_RS03220;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=RM610_RS03220;old_locus_tag=RM610_03235 NZ_JAVRJX010000001.1 Protein Homology CDS 669573 670082 . + 0 ID=cds-WP_107359181.1;Parent=gene-RM610_RS03220;Dbxref=GenBank:WP_107359181.1;Name=WP_107359181.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424951.1;locus_tag=RM610_RS03220;product=energy coupling factor transporter S component ThiW;protein_id=WP_107359181.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 670222 672819 . + . ID=gene-RM610_RS03225;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=RM610_RS03225;old_locus_tag=RM610_03240 NZ_JAVRJX010000001.1 Protein Homology CDS 670222 672819 . + 0 ID=cds-WP_311541698.1;Parent=gene-RM610_RS03225;Dbxref=GenBank:WP_311541698.1;Name=WP_311541698.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=RM610_RS03225;product=DNA mismatch repair protein MutS;protein_id=WP_311541698.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 672836 674827 . + . ID=gene-RM610_RS03230;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=RM610_RS03230;old_locus_tag=RM610_03245 NZ_JAVRJX010000001.1 Protein Homology CDS 672836 674827 . + 0 ID=cds-WP_311541699.1;Parent=gene-RM610_RS03230;Dbxref=GenBank:WP_311541699.1;Name=WP_311541699.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:NF000950.0;locus_tag=RM610_RS03230;product=DNA mismatch repair endonuclease MutL;protein_id=WP_311541699.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 674840 675373 . + . ID=gene-RM610_RS03235;Name=RM610_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03235;old_locus_tag=RM610_03250 NZ_JAVRJX010000001.1 Protein Homology CDS 674840 675373 . + 0 ID=cds-WP_105967280.1;Parent=gene-RM610_RS03235;Dbxref=GenBank:WP_105967280.1;Name=WP_105967280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=RM610_RS03235;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_105967280.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 675400 676425 . + . ID=gene-RM610_RS03240;Name=RM610_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03240;old_locus_tag=RM610_03255 NZ_JAVRJX010000001.1 Protein Homology CDS 675400 676425 . + 0 ID=cds-WP_311541700.1;Parent=gene-RM610_RS03240;Dbxref=GenBank:WP_311541700.1;Name=WP_311541700.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729064.1;locus_tag=RM610_RS03240;product=S66 family peptidase;protein_id=WP_311541700.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 676641 677456 . + . ID=gene-RM610_RS03245;Name=RM610_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03245;old_locus_tag=RM610_03260 NZ_JAVRJX010000001.1 Protein Homology CDS 676641 677456 . + 0 ID=cds-WP_107359184.1;Parent=gene-RM610_RS03245;Dbxref=GenBank:WP_107359184.1;Name=WP_107359184.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=RM610_RS03245;product=MIP/aquaporin family protein;protein_id=WP_107359184.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 677542 679044 . + . ID=gene-RM610_RS03250;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=RM610_RS03250;old_locus_tag=RM610_03265 NZ_JAVRJX010000001.1 Protein Homology CDS 677542 679044 . + 0 ID=cds-WP_107375999.1;Parent=gene-RM610_RS03250;Dbxref=GenBank:WP_107375999.1;Name=WP_107375999.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176556.1;locus_tag=RM610_RS03250;product=glycerol kinase GlpK;protein_id=WP_107375999.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 679168 680841 . + . ID=gene-RM610_RS03255;Name=RM610_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03255;old_locus_tag=RM610_03270 NZ_JAVRJX010000001.1 Protein Homology CDS 679168 680841 . + 0 ID=cds-WP_107359186.1;Parent=gene-RM610_RS03255;Dbxref=GenBank:WP_107359186.1;Name=WP_107359186.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900199.1;locus_tag=RM610_RS03255;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_107359186.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 681126 682061 . + . ID=gene-RM610_RS03260;Name=RM610_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03260;old_locus_tag=RM610_03275 NZ_JAVRJX010000001.1 Protein Homology CDS 681126 682061 . + 0 ID=cds-WP_311541701.1;Parent=gene-RM610_RS03260;Dbxref=GenBank:WP_311541701.1;Name=WP_311541701.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=RM610_RS03260;product=alpha/beta hydrolase;protein_id=WP_311541701.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 682063 682998 . + . ID=gene-RM610_RS03265;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=RM610_RS03265;old_locus_tag=RM610_03280 NZ_JAVRJX010000001.1 Protein Homology CDS 682063 682998 . + 0 ID=cds-WP_107381059.1;Parent=gene-RM610_RS03265;Dbxref=GenBank:WP_107381059.1;Name=WP_107381059.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499812.1;locus_tag=RM610_RS03265;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_107381059.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 683014 683220 . + . ID=gene-RM610_RS03270;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=RM610_RS03270;old_locus_tag=RM610_03285 NZ_JAVRJX010000001.1 Protein Homology CDS 683014 683220 . + 0 ID=cds-WP_037573438.1;Parent=gene-RM610_RS03270;Dbxref=GenBank:WP_037573438.1;Name=WP_037573438.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=RM610_RS03270;product=RNA chaperone Hfq;protein_id=WP_037573438.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 683343 683816 . - . ID=gene-RM610_RS03275;Name=RM610_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03275;old_locus_tag=RM610_03290 NZ_JAVRJX010000001.1 Protein Homology CDS 683343 683816 . - 0 ID=cds-WP_107370040.1;Parent=gene-RM610_RS03275;Dbxref=GenBank:WP_107370040.1;Name=WP_107370040.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472438.1;locus_tag=RM610_RS03275;product=glutathione peroxidase;protein_id=WP_107370040.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 683938 685170 . + . ID=gene-RM610_RS03280;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=RM610_RS03280;old_locus_tag=RM610_03295 NZ_JAVRJX010000001.1 Protein Homology CDS 683938 685170 . + 0 ID=cds-WP_311541703.1;Parent=gene-RM610_RS03280;Dbxref=GenBank:WP_311541703.1;Name=WP_311541703.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365052.1;locus_tag=RM610_RS03280;product=GTPase HflX;protein_id=WP_311541703.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 685185 686423 . + . ID=gene-RM610_RS03285;Name=RM610_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03285;old_locus_tag=RM610_03300 NZ_JAVRJX010000001.1 Protein Homology CDS 685185 686423 . + 0 ID=cds-WP_311541704.1;Parent=gene-RM610_RS03285;Dbxref=GenBank:WP_311541704.1;Name=WP_311541704.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448823.1;locus_tag=RM610_RS03285;product=methionine gamma-lyase family protein;protein_id=WP_311541704.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 686542 686907 . + . ID=gene-RM610_RS03290;Name=RM610_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03290;old_locus_tag=RM610_03305 NZ_JAVRJX010000001.1 Protein Homology CDS 686542 686907 . + 0 ID=cds-WP_105985642.1;Parent=gene-RM610_RS03290;Dbxref=GenBank:WP_105985642.1;Name=WP_105985642.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463893.1;locus_tag=RM610_RS03290;product=MerR family transcriptional regulator;protein_id=WP_105985642.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 686930 688270 . + . ID=gene-RM610_RS03295;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=RM610_RS03295;old_locus_tag=RM610_03310 NZ_JAVRJX010000001.1 Protein Homology CDS 686930 688270 . + 0 ID=cds-WP_107359191.1;Parent=gene-RM610_RS03295;Dbxref=GenBank:WP_107359191.1;Name=WP_107359191.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=RM610_RS03295;product=type I glutamate--ammonia ligase;protein_id=WP_107359191.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 688663 688737 . - . ID=gene-RM610_RS12045;Name=RM610_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12045 NZ_JAVRJX010000001.1 Protein Homology CDS 688663 688737 . - 0 ID=cds-WP_105985687.1;Parent=gene-RM610_RS12045;Dbxref=GenBank:WP_105985687.1;Name=WP_105985687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=RM610_RS12045;product=epsilon family phenol-soluble modulin;protein_id=WP_105985687.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 688941 689153 . + . ID=gene-RM610_RS03300;Name=RM610_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03300;old_locus_tag=RM610_03315 NZ_JAVRJX010000001.1 Protein Homology CDS 688941 689153 . + 0 ID=cds-WP_241955478.1;Parent=gene-RM610_RS03300;Dbxref=GenBank:WP_241955478.1;Name=WP_241955478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997672.1;locus_tag=RM610_RS03300;product=hypothetical protein;protein_id=WP_241955478.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 689327 689944 . + . ID=gene-RM610_RS03305;Name=RM610_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03305;old_locus_tag=RM610_03320 NZ_JAVRJX010000001.1 Protein Homology CDS 689327 689944 . + 0 ID=cds-WP_311541705.1;Parent=gene-RM610_RS03305;Dbxref=GenBank:WP_311541705.1;Name=WP_311541705.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM610_RS03305;product=ABC transporter ATP-binding protein;protein_id=WP_311541705.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 689978 690715 . + . ID=gene-RM610_RS03310;Name=RM610_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03310;old_locus_tag=RM610_03325 NZ_JAVRJX010000001.1 Protein Homology CDS 689978 690715 . + 0 ID=cds-WP_311541707.1;Parent=gene-RM610_RS03310;Dbxref=GenBank:WP_311541707.1;Name=WP_311541707.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013245.7;locus_tag=RM610_RS03310;product=ABC transporter permease;protein_id=WP_311541707.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 690705 691346 . + . ID=gene-RM610_RS03315;Name=RM610_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03315;old_locus_tag=RM610_03330 NZ_JAVRJX010000001.1 Protein Homology CDS 690705 691346 . + 0 ID=cds-WP_311541709.1;Parent=gene-RM610_RS03315;Dbxref=GenBank:WP_311541709.1;Name=WP_311541709.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF019350.7;locus_tag=RM610_RS03315;product=histidine kinase;protein_id=WP_311541709.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 691343 691795 . + . ID=gene-RM610_RS03320;Name=RM610_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03320;old_locus_tag=RM610_03335 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 691343 691795 . + 0 ID=cds-WP_311541710.1;Parent=gene-RM610_RS03320;Dbxref=GenBank:WP_311541710.1;Name=WP_311541710.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS03320;product=sensor histidine kinase;protein_id=WP_311541710.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 691792 692394 . + . ID=gene-RM610_RS03325;Name=RM610_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03325;old_locus_tag=RM610_03340 NZ_JAVRJX010000001.1 Protein Homology CDS 691792 692394 . + 0 ID=cds-WP_311541711.1;Parent=gene-RM610_RS03325;Dbxref=GenBank:WP_311541711.1;Name=WP_311541711.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000624458.1;locus_tag=RM610_RS03325;product=response regulator;protein_id=WP_311541711.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 692496 692705 . - . ID=gene-RM610_RS03330;Name=RM610_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03330;old_locus_tag=RM610_03345 NZ_JAVRJX010000001.1 Protein Homology CDS 692496 692705 . - 0 ID=cds-WP_311541712.1;Parent=gene-RM610_RS03330;Dbxref=GenBank:WP_311541712.1;Name=WP_311541712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167765.1;locus_tag=RM610_RS03330;product=hypothetical protein;protein_id=WP_311541712.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 692849 693355 . + . ID=gene-RM610_RS03335;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=RM610_RS03335;old_locus_tag=RM610_03350 NZ_JAVRJX010000001.1 Protein Homology CDS 692849 693355 . + 0 ID=cds-WP_311541713.1;Parent=gene-RM610_RS03335;Dbxref=GenBank:WP_311541713.1;Name=WP_311541713.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=RM610_RS03335;product=thermonuclease NucI;protein_id=WP_311541713.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 693561 693926 . - . ID=gene-RM610_RS03340;Name=RM610_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03340;old_locus_tag=RM610_03355 NZ_JAVRJX010000001.1 Protein Homology CDS 693561 693926 . - 0 ID=cds-WP_037573462.1;Parent=gene-RM610_RS03340;Dbxref=GenBank:WP_037573462.1;Name=WP_037573462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384374.1;locus_tag=RM610_RS03340;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037573462.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 694438 695028 . + . ID=gene-RM610_RS03345;Name=RM610_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03345;old_locus_tag=RM610_03360 NZ_JAVRJX010000001.1 Protein Homology CDS 694438 695028 . + 0 ID=cds-WP_107359533.1;Parent=gene-RM610_RS03345;Dbxref=GenBank:WP_107359533.1;Name=WP_107359533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424990.1;locus_tag=RM610_RS03345;product=hypothetical protein;protein_id=WP_107359533.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 695234 696583 . - . ID=gene-RM610_RS03350;Name=RM610_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03350;old_locus_tag=RM610_03365 NZ_JAVRJX010000001.1 Protein Homology CDS 695234 696583 . - 0 ID=cds-WP_107359534.1;Parent=gene-RM610_RS03350;Dbxref=GenBank:WP_107359534.1;Name=WP_107359534.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167760.1;locus_tag=RM610_RS03350;product=aspartate kinase;protein_id=WP_107359534.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 696774 698057 . + . ID=gene-RM610_RS03355;Name=RM610_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03355;old_locus_tag=RM610_03370 NZ_JAVRJX010000001.1 Protein Homology CDS 696774 698057 . + 0 ID=cds-WP_107375317.1;Parent=gene-RM610_RS03355;Dbxref=GenBank:WP_107375317.1;Name=WP_107375317.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457511.1;locus_tag=RM610_RS03355;product=homoserine dehydrogenase;protein_id=WP_107375317.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 698063 699127 . + . ID=gene-RM610_RS03360;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=RM610_RS03360;old_locus_tag=RM610_03375 NZ_JAVRJX010000001.1 Protein Homology CDS 698063 699127 . + 0 ID=cds-WP_107359536.1;Parent=gene-RM610_RS03360;Dbxref=GenBank:WP_107359536.1;Name=WP_107359536.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=RM610_RS03360;product=threonine synthase;protein_id=WP_107359536.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 699127 700044 . + . ID=gene-RM610_RS03365;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=RM610_RS03365;old_locus_tag=RM610_03380 NZ_JAVRJX010000001.1 Protein Homology CDS 699127 700044 . + 0 ID=cds-WP_182472265.1;Parent=gene-RM610_RS03365;Dbxref=GenBank:WP_182472265.1;Name=WP_182472265.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507779.1;locus_tag=RM610_RS03365;product=homoserine kinase;protein_id=WP_182472265.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 700146 700946 . + . ID=gene-RM610_RS03370;Name=RM610_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03370;old_locus_tag=RM610_03385 NZ_JAVRJX010000001.1 Protein Homology CDS 700146 700946 . + 0 ID=cds-WP_107359538.1;Parent=gene-RM610_RS03370;Dbxref=GenBank:WP_107359538.1;Name=WP_107359538.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=RM610_RS03370;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_107359538.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 701006 701320 . - . ID=gene-RM610_RS03375;Name=RM610_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03375;old_locus_tag=RM610_03390 NZ_JAVRJX010000001.1 Protein Homology CDS 701006 701320 . - 0 ID=cds-WP_107370196.1;Parent=gene-RM610_RS03375;Dbxref=GenBank:WP_107370196.1;Name=WP_107370196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830950.1;locus_tag=RM610_RS03375;product=hypothetical protein;protein_id=WP_107370196.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 701436 702893 . - . ID=gene-RM610_RS03380;Name=RM610_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03380;old_locus_tag=RM610_03395 NZ_JAVRJX010000001.1 Protein Homology CDS 701436 702893 . - 0 ID=cds-WP_311541714.1;Parent=gene-RM610_RS03380;Dbxref=GenBank:WP_311541714.1;Name=WP_311541714.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900224.1;locus_tag=RM610_RS03380;product=amino acid permease;protein_id=WP_311541714.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 703101 704597 . + . ID=gene-RM610_RS03385;Name=RM610_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03385;old_locus_tag=RM610_03400 NZ_JAVRJX010000001.1 Protein Homology CDS 703101 704597 . + 0 ID=cds-WP_107370194.1;Parent=gene-RM610_RS03385;Dbxref=GenBank:WP_107370194.1;Name=WP_107370194.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=RM610_RS03385;product=catalase;protein_id=WP_107370194.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 704735 704884 . - . ID=gene-RM610_RS03390;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM610_RS03390;old_locus_tag=RM610_03405 NZ_JAVRJX010000001.1 Protein Homology CDS 704735 704884 . - 0 ID=cds-WP_014613994.1;Parent=gene-RM610_RS03390;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM610_RS03390;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 705072 705341 . + . ID=gene-RM610_RS03395;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=RM610_RS03395;old_locus_tag=RM610_03410 NZ_JAVRJX010000001.1 Protein Homology CDS 705072 705341 . + 0 ID=cds-WP_311541715.1;Parent=gene-RM610_RS03395;Dbxref=GenBank:WP_311541715.1;Name=WP_311541715.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=RM610_RS03395;product=30S ribosomal protein S14;protein_id=WP_311541715.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 705417 706394 . + . ID=gene-RM610_RS03400;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=RM610_RS03400;old_locus_tag=RM610_03415 NZ_JAVRJX010000001.1 Protein Homology CDS 705417 706394 . + 0 ID=cds-WP_105965267.1;Parent=gene-RM610_RS03400;Dbxref=GenBank:WP_105965267.1;Name=WP_105965267.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=RM610_RS03400;product=GMP reductase;protein_id=WP_105965267.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 706488 707420 . + . ID=gene-RM610_RS03405;Name=RM610_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03405;old_locus_tag=RM610_03420 NZ_JAVRJX010000001.1 Protein Homology CDS 706488 707420 . + 0 ID=cds-WP_198645087.1;Parent=gene-RM610_RS03405;Dbxref=GenBank:WP_198645087.1;Name=WP_198645087.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167752.1;locus_tag=RM610_RS03405;product=CAP domain-containing protein;protein_id=WP_198645087.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 707796 708419 . - . ID=gene-RM610_RS03410;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=RM610_RS03410;old_locus_tag=RM610_03425 NZ_JAVRJX010000001.1 Protein Homology CDS 707796 708419 . - 0 ID=cds-WP_037573494.1;Parent=gene-RM610_RS03410;Dbxref=GenBank:WP_037573494.1;Name=WP_037573494.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=RM610_RS03410;product=transcriptional repressor LexA;protein_id=WP_037573494.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 708563 708787 . + . ID=gene-RM610_RS03415;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=RM610_RS03415;old_locus_tag=RM610_03430 NZ_JAVRJX010000001.1 Protein Homology CDS 708563 708787 . + 0 ID=cds-WP_105985626.1;Parent=gene-RM610_RS03415;Dbxref=GenBank:WP_105985626.1;Name=WP_105985626.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=RM610_RS03415;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_105985626.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 709016 709255 . + . ID=gene-RM610_RS03420;Name=RM610_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03420;old_locus_tag=RM610_03435 NZ_JAVRJX010000001.1 Protein Homology CDS 709016 709255 . + 0 ID=cds-WP_311541716.1;Parent=gene-RM610_RS03420;Dbxref=GenBank:WP_311541716.1;Name=WP_311541716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442718.1;locus_tag=RM610_RS03420;product=DUF896 domain-containing protein;protein_id=WP_311541716.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 709336 711324 . + . ID=gene-RM610_RS03425;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=RM610_RS03425;old_locus_tag=RM610_03440 NZ_JAVRJX010000001.1 Protein Homology CDS 709336 711324 . + 0 ID=cds-WP_107359543.1;Parent=gene-RM610_RS03425;Dbxref=GenBank:WP_107359543.1;Name=WP_107359543.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478242.1;locus_tag=RM610_RS03425;product=transketolase;protein_id=WP_107359543.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 711592 711819 . + . ID=gene-RM610_RS03430;Name=RM610_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03430;old_locus_tag=RM610_03445 NZ_JAVRJX010000001.1 Protein Homology CDS 711592 711819 . + 0 ID=cds-WP_375712506.1;Parent=gene-RM610_RS03430;Dbxref=GenBank:WP_375712506.1;Name=WP_375712506.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=RM610_RS03430;product=YneF family protein;protein_id=WP_375712506.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 711997 712470 . + . ID=gene-RM610_RS03435;Name=RM610_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03435;old_locus_tag=RM610_03450 NZ_JAVRJX010000001.1 Protein Homology CDS 711997 712470 . + 0 ID=cds-WP_107381613.1;Parent=gene-RM610_RS03435;Dbxref=GenBank:WP_107381613.1;Name=WP_107381613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165384.1;locus_tag=RM610_RS03435;product=CcdC family protein;protein_id=WP_107381613.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 712615 713733 . + . ID=gene-RM610_RS03440;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=RM610_RS03440;old_locus_tag=RM610_03455 NZ_JAVRJX010000001.1 Protein Homology CDS 712615 713733 . + 0 ID=cds-WP_107381612.1;Parent=gene-RM610_RS03440;Dbxref=GenBank:WP_107381612.1;Name=WP_107381612.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=RM610_RS03440;product=exonuclease subunit SbcD;protein_id=WP_107381612.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 713735 716767 . + . ID=gene-RM610_RS03445;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=RM610_RS03445;old_locus_tag=RM610_03460 NZ_JAVRJX010000001.1 Protein Homology CDS 713735 716767 . + 0 ID=cds-WP_311541718.1;Parent=gene-RM610_RS03445;Dbxref=GenBank:WP_311541718.1;Name=WP_311541718.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF041751.2;locus_tag=RM610_RS03445;product=exonuclease subunit SbcC;protein_id=WP_311541718.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 717058 717423 . - . ID=gene-RM610_RS03450;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=RM610_RS03450;old_locus_tag=RM610_03465 NZ_JAVRJX010000001.1 Protein Homology CDS 717058 717423 . - 0 ID=cds-WP_037573524.1;Parent=gene-RM610_RS03450;Dbxref=GenBank:WP_037573524.1;Name=WP_037573524.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480859.1;locus_tag=RM610_RS03450;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_037573524.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 717667 719301 . + . ID=gene-RM610_RS03455;Name=RM610_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03455;old_locus_tag=RM610_03470 NZ_JAVRJX010000001.1 Protein Homology CDS 717667 719301 . + 0 ID=cds-WP_107381696.1;Parent=gene-RM610_RS03455;Dbxref=GenBank:WP_107381696.1;Name=WP_107381696.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=RM610_RS03455;product=BCCT family transporter;protein_id=WP_107381696.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 719574 722276 . + . ID=gene-RM610_RS03460;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=RM610_RS03460;old_locus_tag=RM610_03475 NZ_JAVRJX010000001.1 Protein Homology CDS 719574 722276 . + 0 ID=cds-WP_311541719.1;Parent=gene-RM610_RS03460;Dbxref=GenBank:WP_311541719.1;Name=WP_311541719.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=RM610_RS03460;product=aconitate hydratase AcnA;protein_id=WP_311541719.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 722466 722918 . + . ID=gene-RM610_RS03465;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=RM610_RS03465;old_locus_tag=RM610_03480 NZ_JAVRJX010000001.1 Protein Homology CDS 722466 722918 . + 0 ID=cds-WP_107359549.1;Parent=gene-RM610_RS03465;Dbxref=GenBank:WP_107359549.1;Name=WP_107359549.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831194.1;locus_tag=RM610_RS03465;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_107359549.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 723074 723373 . - . ID=gene-RM610_RS03470;Name=RM610_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03470;old_locus_tag=RM610_03485 NZ_JAVRJX010000001.1 Protein Homology CDS 723074 723373 . - 0 ID=cds-WP_107369213.1;Parent=gene-RM610_RS03470;Dbxref=GenBank:WP_107369213.1;Name=WP_107369213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724387.1;locus_tag=RM610_RS03470;product=HesB/YadR/YfhF family protein;protein_id=WP_107369213.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 723457 724038 . - . ID=gene-RM610_RS03475;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=RM610_RS03475;old_locus_tag=RM610_03490 NZ_JAVRJX010000001.1 Protein Homology CDS 723457 724038 . - 0 ID=cds-WP_037573536.1;Parent=gene-RM610_RS03475;Dbxref=GenBank:WP_037573536.1;Name=WP_037573536.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=RM610_RS03475;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_037573536.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 724252 726246 . + . ID=gene-RM610_RS03480;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=RM610_RS03480;old_locus_tag=RM610_03495 NZ_JAVRJX010000001.1 Protein Homology CDS 724252 726246 . + 0 ID=cds-WP_311541720.1;Parent=gene-RM610_RS03480;Dbxref=GenBank:WP_311541720.1;Name=WP_311541720.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=RM610_RS03480;product=DNA topoisomerase IV subunit B;protein_id=WP_311541720.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 726246 728672 . + . ID=gene-RM610_RS03485;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=RM610_RS03485;old_locus_tag=RM610_03500 NZ_JAVRJX010000001.1 Protein Homology CDS 726246 728672 . + 0 ID=cds-WP_107359552.1;Parent=gene-RM610_RS03485;Dbxref=GenBank:WP_107359552.1;Name=WP_107359552.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=RM610_RS03485;product=DNA topoisomerase IV subunit A;protein_id=WP_107359552.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 728762 730231 . + . ID=gene-RM610_RS03490;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=RM610_RS03490;old_locus_tag=RM610_03505 NZ_JAVRJX010000001.1 Protein Homology CDS 728762 730231 . + 0 ID=cds-WP_105985616.1;Parent=gene-RM610_RS03490;Dbxref=GenBank:WP_105985616.1;Name=WP_105985616.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499882.1;locus_tag=RM610_RS03490;product=glutamine transporter AlsT;protein_id=WP_105985616.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 730396 731247 . + . ID=gene-RM610_RS03495;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=RM610_RS03495;old_locus_tag=RM610_03510 NZ_JAVRJX010000001.1 Protein Homology CDS 730396 731247 . + 0 ID=cds-WP_311541721.1;Parent=gene-RM610_RS03495;Dbxref=GenBank:WP_311541721.1;Name=WP_311541721.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=RM610_RS03495;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_311541721.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 731356 733398 . + . ID=gene-RM610_RS03500;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=RM610_RS03500;old_locus_tag=RM610_03515 NZ_JAVRJX010000001.1 Protein Homology CDS 731356 733398 . + 0 ID=cds-WP_107375324.1;Parent=gene-RM610_RS03500;Dbxref=GenBank:WP_107375324.1;Name=WP_107375324.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425020.1;locus_tag=RM610_RS03500;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_107375324.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 733608 734831 . + . ID=gene-RM610_RS03505;Name=RM610_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03505;old_locus_tag=RM610_03520 NZ_JAVRJX010000001.1 Protein Homology CDS 733608 734831 . + 0 ID=cds-WP_107369217.1;Parent=gene-RM610_RS03505;Dbxref=GenBank:WP_107369217.1;Name=WP_107369217.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174679.1;locus_tag=RM610_RS03505;product=AI-2E family transporter;protein_id=WP_107369217.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 735015 737534 . + . ID=gene-RM610_RS03510;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=RM610_RS03510;old_locus_tag=RM610_03525 NZ_JAVRJX010000001.1 Protein Homology CDS 735015 737534 . + 0 ID=cds-WP_311541722.1;Parent=gene-RM610_RS03510;Dbxref=GenBank:WP_311541722.1;Name=WP_311541722.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275840.1;locus_tag=RM610_RS03510;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_311541722.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 737727 738242 . - . ID=gene-RM610_RS03515;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM610_RS03515;old_locus_tag=RM610_03530 NZ_JAVRJX010000001.1 Protein Homology CDS 737727 738242 . - 0 ID=cds-WP_107359557.1;Parent=gene-RM610_RS03515;Dbxref=GenBank:WP_107359557.1;Name=WP_107359557.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497837.1;locus_tag=RM610_RS03515;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_107359557.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 738386 739351 . + . ID=gene-RM610_RS03520;Name=RM610_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03520;old_locus_tag=RM610_03535 NZ_JAVRJX010000001.1 Protein Homology CDS 738386 739351 . + 0 ID=cds-WP_107359558.1;Parent=gene-RM610_RS03520;Dbxref=GenBank:WP_107359558.1;Name=WP_107359558.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499888.1;locus_tag=RM610_RS03520;product=LCP family protein;protein_id=WP_107359558.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 739386 739571 . - . ID=gene-RM610_RS03525;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=RM610_RS03525;old_locus_tag=RM610_03540 NZ_JAVRJX010000001.1 Protein Homology CDS 739386 739571 . - 0 ID=cds-WP_107359559.1;Parent=gene-RM610_RS03525;Dbxref=GenBank:WP_107359559.1;Name=WP_107359559.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=RM610_RS03525;product=2-hydroxymuconate tautomerase;protein_id=WP_107359559.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 739714 740124 . + . ID=gene-RM610_RS03530;Name=RM610_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03530;old_locus_tag=RM610_03545 NZ_JAVRJX010000001.1 Protein Homology CDS 739714 740124 . + 0 ID=cds-WP_107364401.1;Parent=gene-RM610_RS03530;Dbxref=GenBank:WP_107364401.1;Name=WP_107364401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=RM610_RS03530;product=sporulation protein;protein_id=WP_107364401.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 740279 741541 . + . ID=gene-RM610_RS03535;Name=RM610_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03535;old_locus_tag=RM610_03550 NZ_JAVRJX010000001.1 Protein Homology CDS 740279 741541 . + 0 ID=cds-WP_107369220.1;Parent=gene-RM610_RS03535;Dbxref=GenBank:WP_107369220.1;Name=WP_107369220.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=RM610_RS03535;product=Y-family DNA polymerase;protein_id=WP_107369220.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 741674 742768 . - . ID=gene-RM610_RS03540;Name=RM610_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03540;old_locus_tag=RM610_03555 NZ_JAVRJX010000001.1 Protein Homology CDS 741674 742768 . - 0 ID=cds-WP_311541723.1;Parent=gene-RM610_RS03540;Dbxref=GenBank:WP_311541723.1;Name=WP_311541723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=RM610_RS03540;product=prephenate dehydrogenase;protein_id=WP_311541723.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 743298 744557 . + . ID=gene-RM610_RS03545;Name=RM610_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03545;old_locus_tag=RM610_03560 NZ_JAVRJX010000001.1 Protein Homology CDS 743298 744557 . + 0 ID=cds-WP_107359853.1;Parent=gene-RM610_RS03545;Dbxref=GenBank:WP_107359853.1;Name=WP_107359853.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468762.1;locus_tag=RM610_RS03545;product=aminoacyltransferase;protein_id=WP_107359853.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 744582 745841 . + . ID=gene-RM610_RS03550;Name=RM610_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03550;old_locus_tag=RM610_03565 NZ_JAVRJX010000001.1 Protein Homology CDS 744582 745841 . + 0 ID=cds-WP_107359852.1;Parent=gene-RM610_RS03550;Dbxref=GenBank:WP_107359852.1;Name=WP_107359852.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=RM610_RS03550;product=aminoacyltransferase;protein_id=WP_107359852.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 746367 746690 . - . ID=gene-RM610_RS03555;Name=RM610_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03555;old_locus_tag=RM610_03570 NZ_JAVRJX010000001.1 Protein Homology CDS 746367 746690 . - 0 ID=cds-WP_107358954.1;Parent=gene-RM610_RS03555;Dbxref=GenBank:WP_107358954.1;Name=WP_107358954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167722.1;locus_tag=RM610_RS03555;product=hypothetical protein;protein_id=WP_107358954.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 746822 748633 . + . ID=gene-RM610_RS03560;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM610_RS03560;old_locus_tag=RM610_03575 NZ_JAVRJX010000001.1 Protein Homology CDS 746822 748633 . + 0 ID=cds-WP_107381275.1;Parent=gene-RM610_RS03560;Dbxref=GenBank:WP_107381275.1;Name=WP_107381275.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383999.1;locus_tag=RM610_RS03560;product=oligoendopeptidase F;protein_id=WP_107381275.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 748778 749722 . + . ID=gene-RM610_RS03565;Name=RM610_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03565;old_locus_tag=RM610_03580 NZ_JAVRJX010000001.1 Protein Homology CDS 748778 749722 . + 0 ID=cds-WP_157946076.1;Parent=gene-RM610_RS03565;Dbxref=GenBank:WP_157946076.1;Name=WP_157946076.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:TIGR03168.1;locus_tag=RM610_RS03565;product=1-phosphofructokinase family hexose kinase;protein_id=WP_157946076.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 749779 750684 . - . ID=gene-RM610_RS03570;Name=RM610_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03570;old_locus_tag=RM610_03585 NZ_JAVRJX010000001.1 Protein Homology CDS 749779 750684 . - 0 ID=cds-WP_105965280.1;Parent=gene-RM610_RS03570;Dbxref=GenBank:WP_105965280.1;Name=WP_105965280.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167718.1;locus_tag=RM610_RS03570;product=CvfB family protein;protein_id=WP_105965280.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 750841 752448 . + . ID=gene-RM610_RS03575;Name=RM610_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03575;old_locus_tag=RM610_03590 NZ_JAVRJX010000001.1 Protein Homology CDS 750841 752448 . + 0 ID=cds-WP_037573587.1;Parent=gene-RM610_RS03575;Dbxref=GenBank:WP_037573587.1;Name=WP_037573587.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=RM610_RS03575;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_037573587.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 752610 752786 . + . ID=id-NZ_JAVRJX010000001.1:752610..752786;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 752905 753888 . + . ID=gene-RM610_RS03580;Name=RM610_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03580;old_locus_tag=RM610_03595 NZ_JAVRJX010000001.1 Protein Homology CDS 752905 753888 . + 0 ID=cds-WP_107381272.1;Parent=gene-RM610_RS03580;Dbxref=GenBank:WP_107381272.1;Name=WP_107381272.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase (NADP+) activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499922.1;locus_tag=RM610_RS03580;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_107381272.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 753910 754788 . + . ID=gene-RM610_RS03585;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=RM610_RS03585;old_locus_tag=RM610_03600 NZ_JAVRJX010000001.1 Protein Homology CDS 753910 754788 . + 0 ID=cds-WP_107369226.1;Parent=gene-RM610_RS03585;Dbxref=GenBank:WP_107369226.1;Name=WP_107369226.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303134.1;locus_tag=RM610_RS03585;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_107369226.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 754785 755507 . + . ID=gene-RM610_RS03590;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=RM610_RS03590;old_locus_tag=RM610_03605 NZ_JAVRJX010000001.1 Protein Homology CDS 754785 755507 . + 0 ID=cds-WP_107369227.1;Parent=gene-RM610_RS03590;Dbxref=GenBank:WP_107369227.1;Name=WP_107369227.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478208.1;locus_tag=RM610_RS03590;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_107369227.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 755525 756244 . + . ID=gene-RM610_RS03595;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=RM610_RS03595;old_locus_tag=RM610_03610 NZ_JAVRJX010000001.1 Protein Homology CDS 755525 756244 . + 0 ID=cds-WP_105985599.1;Parent=gene-RM610_RS03595;Dbxref=GenBank:WP_105985599.1;Name=WP_105985599.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499925.1;locus_tag=RM610_RS03595;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_105985599.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 756432 757580 . + . ID=gene-RM610_RS03600;Name=RM610_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03600;old_locus_tag=RM610_03615 NZ_JAVRJX010000001.1 Protein Homology CDS 756432 757580 . + 0 ID=cds-WP_107369228.1;Parent=gene-RM610_RS03600;Dbxref=GenBank:WP_107369228.1;Name=WP_107369228.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453219.1;locus_tag=RM610_RS03600;product=M20 metallopeptidase family protein;protein_id=WP_107369228.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 757583 758653 . + . ID=gene-RM610_RS03605;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM610_RS03605;old_locus_tag=RM610_03620 NZ_JAVRJX010000001.1 Protein Homology CDS 757583 758653 . + 0 ID=cds-WP_311541725.1;Parent=gene-RM610_RS03605;Dbxref=GenBank:WP_311541725.1;Name=WP_311541725.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127604.1;locus_tag=RM610_RS03605;product=alanine racemase;protein_id=WP_311541725.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 758650 759915 . + . ID=gene-RM610_RS03610;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=RM610_RS03610;old_locus_tag=RM610_03625 NZ_JAVRJX010000001.1 Protein Homology CDS 758650 759915 . + 0 ID=cds-WP_107369230.1;Parent=gene-RM610_RS03610;Dbxref=GenBank:WP_107369230.1;Name=WP_107369230.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502404.1;locus_tag=RM610_RS03610;product=diaminopimelate decarboxylase;protein_id=WP_107369230.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 760171 760371 . - . ID=gene-RM610_RS03615;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=RM610_RS03615;old_locus_tag=RM610_03630 NZ_JAVRJX010000001.1 Protein Homology CDS 760171 760371 . - 0 ID=cds-WP_001831260.1;Parent=gene-RM610_RS03615;Dbxref=GenBank:WP_001831260.1;Name=WP_001831260.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=RM610_RS03615;product=cold shock protein CspA;protein_id=WP_001831260.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 760550 760858 . - . ID=gene-RM610_RS03620;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=RM610_RS03620;old_locus_tag=RM610_03635 NZ_JAVRJX010000001.1 Protein Homology CDS 760550 760858 . - 0 ID=cds-WP_107358944.1;Parent=gene-RM610_RS03620;Dbxref=GenBank:WP_107358944.1;Name=WP_107358944.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=RM610_RS03620;product=regulatory protein MsaA;protein_id=WP_107358944.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 761194 761463 . + . ID=gene-RM610_RS03625;Name=RM610_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03625;old_locus_tag=RM610_03640 NZ_JAVRJX010000001.1 Protein Homology CDS 761194 761463 . + 0 ID=cds-WP_107369231.1;Parent=gene-RM610_RS03625;Dbxref=GenBank:WP_107369231.1;Name=WP_107369231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459142.1;locus_tag=RM610_RS03625;product=acylphosphatase;protein_id=WP_107369231.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 761483 762118 . + . ID=gene-RM610_RS03630;Name=RM610_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03630;old_locus_tag=RM610_03645 NZ_JAVRJX010000001.1 Protein Homology CDS 761483 762118 . + 0 ID=cds-WP_105985594.1;Parent=gene-RM610_RS03630;Dbxref=GenBank:WP_105985594.1;Name=WP_105985594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425055.1;locus_tag=RM610_RS03630;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_105985594.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 762115 763308 . + . ID=gene-RM610_RS03635;Name=RM610_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03635;old_locus_tag=RM610_03650 NZ_JAVRJX010000001.1 Protein Homology CDS 762115 763308 . + 0 ID=cds-WP_107358941.1;Parent=gene-RM610_RS03635;Dbxref=GenBank:WP_107358941.1;Name=WP_107358941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499935.1;locus_tag=RM610_RS03635;product=toxic anion resistance protein;protein_id=WP_107358941.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 763443 764789 . - . ID=gene-RM610_RS03640;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=RM610_RS03640;old_locus_tag=RM610_03655 NZ_JAVRJX010000001.1 Protein Homology CDS 763443 764789 . - 0 ID=cds-WP_311541727.1;Parent=gene-RM610_RS03640;Dbxref=GenBank:WP_311541727.1;Name=WP_311541727.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=RM610_RS03640;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_311541727.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 764910 766799 . - . ID=gene-RM610_RS03645;Name=RM610_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03645;old_locus_tag=RM610_03660 NZ_JAVRJX010000001.1 Protein Homology CDS 764910 766799 . - 0 ID=cds-WP_311541728.1;Parent=gene-RM610_RS03645;Dbxref=GenBank:WP_311541728.1;Name=WP_311541728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275795.1;locus_tag=RM610_RS03645;product=vWA domain-containing protein;protein_id=WP_311541728.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 766811 767614 . - . ID=gene-RM610_RS03650;Name=RM610_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03650;old_locus_tag=RM610_03665 NZ_JAVRJX010000001.1 Protein Homology CDS 766811 767614 . - 0 ID=cds-WP_107381535.1;Parent=gene-RM610_RS03650;Dbxref=GenBank:WP_107381535.1;Name=WP_107381535.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=RM610_RS03650;product=ATP-binding protein;protein_id=WP_107381535.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 767676 767882 . - . ID=gene-RM610_RS03655;Name=RM610_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03655;old_locus_tag=RM610_03670 NZ_JAVRJX010000001.1 Protein Homology CDS 767676 767882 . - 0 ID=cds-WP_037573629.1;Parent=gene-RM610_RS03655;Dbxref=GenBank:WP_037573629.1;Name=WP_037573629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=RM610_RS03655;product=DUF6501 family protein;protein_id=WP_037573629.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 767899 768711 . - . ID=gene-RM610_RS03660;Name=RM610_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03660;old_locus_tag=RM610_03675 NZ_JAVRJX010000001.1 Protein Homology CDS 767899 768711 . - 0 ID=cds-WP_107381536.1;Parent=gene-RM610_RS03660;Dbxref=GenBank:WP_107381536.1;Name=WP_107381536.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442836.1;locus_tag=RM610_RS03660;product=VOC family protein;protein_id=WP_107381536.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 769003 770259 . - . ID=gene-RM610_RS03665;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=RM610_RS03665;old_locus_tag=RM610_03680 NZ_JAVRJX010000001.1 Protein Homology CDS 769003 770259 . - 0 ID=cds-WP_107369236.1;Parent=gene-RM610_RS03665;Dbxref=GenBank:WP_107369236.1;Name=WP_107369236.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729116.1;locus_tag=RM610_RS03665;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_107369236.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 770273 773062 . - . ID=gene-RM610_RS03670;Name=RM610_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03670;old_locus_tag=RM610_03685 NZ_JAVRJX010000001.1 Protein Homology CDS 770273 773062 . - 0 ID=cds-WP_311541729.1;Parent=gene-RM610_RS03670;Dbxref=GenBank:WP_311541729.1;Name=WP_311541729.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=RM610_RS03670;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_311541729.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 773153 774523 . - . ID=gene-RM610_RS03675;Name=RM610_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03675;old_locus_tag=RM610_03690 NZ_JAVRJX010000001.1 Protein Homology CDS 773153 774523 . - 0 ID=cds-WP_107389347.1;Parent=gene-RM610_RS03675;Dbxref=GenBank:WP_107389347.1;Name=WP_107389347.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459152.1;locus_tag=RM610_RS03675;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_107389347.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 774520 775197 . - . ID=gene-RM610_RS03680;Name=RM610_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03680;old_locus_tag=RM610_03695 NZ_JAVRJX010000001.1 Protein Homology CDS 774520 775197 . - 0 ID=cds-WP_107358934.1;Parent=gene-RM610_RS03680;Dbxref=GenBank:WP_107358934.1;Name=WP_107358934.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=RM610_RS03680;product=response regulator transcription factor;protein_id=WP_107358934.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 775552 776166 . - . ID=gene-RM610_RS03685;Name=RM610_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03685;old_locus_tag=RM610_03700 NZ_JAVRJX010000001.1 Protein Homology CDS 775552 776166 . - 0 ID=cds-WP_107381838.1;Parent=gene-RM610_RS03685;Dbxref=GenBank:WP_107381838.1;Name=WP_107381838.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425067.1;locus_tag=RM610_RS03685;product=phosphatase PAP2 family protein;protein_id=WP_107381838.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 776181 777251 . - . ID=gene-RM610_RS03690;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=RM610_RS03690;old_locus_tag=RM610_03705 NZ_JAVRJX010000001.1 Protein Homology CDS 776181 777251 . - 0 ID=cds-WP_107375342.1;Parent=gene-RM610_RS03690;Dbxref=GenBank:WP_107375342.1;Name=WP_107375342.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459156.1;locus_tag=RM610_RS03690;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_107375342.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 777261 777770 . - . ID=gene-RM610_RS03695;Name=RM610_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03695;old_locus_tag=RM610_03710 NZ_JAVRJX010000001.1 Protein Homology CDS 777261 777770 . - 0 ID=cds-WP_107358931.1;Parent=gene-RM610_RS03695;Dbxref=GenBank:WP_107358931.1;Name=WP_107358931.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729121.1;locus_tag=RM610_RS03695;product=GNAT family N-acetyltransferase;protein_id=WP_107358931.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 777770 779209 . - . ID=gene-RM610_RS03700;Name=RM610_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03700;old_locus_tag=RM610_03715 NZ_JAVRJX010000001.1 Protein Homology CDS 777770 779209 . - 0 ID=cds-WP_107381848.1;Parent=gene-RM610_RS03700;Dbxref=GenBank:WP_107381848.1;Name=WP_107381848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455339.1;locus_tag=RM610_RS03700;product=S41 family peptidase;protein_id=WP_107381848.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 779357 779578 . - . ID=gene-RM610_RS03705;Name=RM610_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03705;old_locus_tag=RM610_03720 NZ_JAVRJX010000001.1 Protein Homology CDS 779357 779578 . - 0 ID=cds-WP_103159582.1;Parent=gene-RM610_RS03705;Dbxref=GenBank:WP_103159582.1;Name=WP_103159582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=RM610_RS03705;product=YozE family protein;protein_id=WP_103159582.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 779578 780078 . - . ID=gene-RM610_RS03710;Name=RM610_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03710;old_locus_tag=RM610_03725 NZ_JAVRJX010000001.1 Protein Homology CDS 779578 780078 . - 0 ID=cds-WP_107358928.1;Parent=gene-RM610_RS03710;Dbxref=GenBank:WP_107358928.1;Name=WP_107358928.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=RM610_RS03710;product=PTS sugar transporter subunit IIA;protein_id=WP_107358928.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 780093 780521 . - . ID=gene-RM610_RS03715;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=RM610_RS03715;old_locus_tag=RM610_03730 NZ_JAVRJX010000001.1 Protein Homology CDS 780093 780521 . - 0 ID=cds-WP_037573662.1;Parent=gene-RM610_RS03715;Dbxref=GenBank:WP_037573662.1;Name=WP_037573662.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=RM610_RS03715;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_037573662.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 780514 781041 . - . ID=gene-RM610_RS03720;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM610_RS03720;old_locus_tag=RM610_03735 NZ_JAVRJX010000001.1 Protein Homology CDS 780514 781041 . - 0 ID=cds-WP_037573665.1;Parent=gene-RM610_RS03720;Dbxref=GenBank:WP_037573665.1;Name=WP_037573665.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453252.1;locus_tag=RM610_RS03720;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_037573665.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 781060 781905 . - . ID=gene-RM610_RS03725;Name=RM610_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03725;old_locus_tag=RM610_03740 NZ_JAVRJX010000001.1 Protein Homology CDS 781060 781905 . - 0 ID=cds-WP_311541730.1;Parent=gene-RM610_RS03725;Dbxref=GenBank:WP_311541730.1;Name=WP_311541730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=RM610_RS03725;product=fatty acid kinase binding subunit FakB;protein_id=WP_311541730.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 781923 782399 . - . ID=gene-RM610_RS03730;Name=RM610_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03730;old_locus_tag=RM610_03745 NZ_JAVRJX010000001.1 Protein Homology CDS 781923 782399 . - 0 ID=cds-WP_311541731.1;Parent=gene-RM610_RS03730;Dbxref=GenBank:WP_311541731.1;Name=WP_311541731.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=RM610_RS03730;product=dihydrofolate reductase;protein_id=WP_311541731.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 782461 783414 . - . ID=gene-RM610_RS03735;Name=RM610_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03735;old_locus_tag=RM610_03750 NZ_JAVRJX010000001.1 Protein Homology CDS 782461 783414 . - 0 ID=cds-WP_107358925.1;Parent=gene-RM610_RS03735;Dbxref=GenBank:WP_107358925.1;Name=WP_107358925.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=RM610_RS03735;product=thymidylate synthase;protein_id=WP_107358925.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 783628 784068 . - . ID=gene-RM610_RS03740;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=RM610_RS03740;old_locus_tag=RM610_03755 NZ_JAVRJX010000001.1 Protein Homology CDS 783628 784068 . - 0 ID=cds-WP_311541732.1;Parent=gene-RM610_RS03740;Dbxref=GenBank:WP_311541732.1;Name=WP_311541732.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=RM610_RS03740;product=bacilliredoxin BrxA;protein_id=WP_311541732.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 784087 785205 . - . ID=gene-RM610_RS03745;Name=RM610_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03745;old_locus_tag=RM610_03760 NZ_JAVRJX010000001.1 Protein Homology CDS 784087 785205 . - 0 ID=cds-WP_311541733.1;Parent=gene-RM610_RS03745;Dbxref=GenBank:WP_311541733.1;Name=WP_311541733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468951.1;locus_tag=RM610_RS03745;product=virulence factor;protein_id=WP_311541733.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 785216 785401 . - . ID=gene-RM610_RS03750;Name=RM610_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03750;old_locus_tag=RM610_03765 NZ_JAVRJX010000001.1 Protein Homology CDS 785216 785401 . - 0 ID=cds-WP_037573683.1;Parent=gene-RM610_RS03750;Dbxref=GenBank:WP_037573683.1;Name=WP_037573683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=RM610_RS03750;product=zinc-finger domain-containing protein;protein_id=WP_037573683.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 785651 786364 . + . ID=gene-RM610_RS03755;Name=RM610_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03755;old_locus_tag=RM610_03770 NZ_JAVRJX010000001.1 Protein Homology CDS 785651 786364 . + 0 ID=cds-WP_107358922.1;Parent=gene-RM610_RS03755;Dbxref=GenBank:WP_107358922.1;Name=WP_107358922.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=RM610_RS03755;product=queuosine precursor transporter;protein_id=WP_107358922.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 786554 786979 . + . ID=gene-RM610_RS03760;Name=RM610_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03760;old_locus_tag=RM610_03775 NZ_JAVRJX010000001.1 Protein Homology CDS 786554 786979 . + 0 ID=cds-WP_107358921.1;Parent=gene-RM610_RS03760;Dbxref=GenBank:WP_107358921.1;Name=WP_107358921.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062934.1;locus_tag=RM610_RS03760;product=ribonuclease HI family protein;protein_id=WP_107358921.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 787008 787895 . - . ID=gene-RM610_RS03765;Name=RM610_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03765;old_locus_tag=RM610_03780 NZ_JAVRJX010000001.1 Protein Homology CDS 787008 787895 . - 0 ID=cds-WP_107358920.1;Parent=gene-RM610_RS03765;Dbxref=GenBank:WP_107358920.1;Name=WP_107358920.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835246.1;locus_tag=RM610_RS03765;product=5'-3' exonuclease;protein_id=WP_107358920.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 787892 791353 . - . ID=gene-RM610_RS03770;Name=RM610_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03770;old_locus_tag=RM610_03785 NZ_JAVRJX010000001.1 Protein Homology CDS 787892 791353 . - 0 ID=cds-WP_107375351.1;Parent=gene-RM610_RS03770;Dbxref=GenBank:WP_107375351.1;Name=WP_107375351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=RM610_RS03770;product=dynamin family protein;protein_id=WP_107375351.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 791506 792420 . - . ID=gene-RM610_RS03775;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=RM610_RS03775;old_locus_tag=RM610_03790 NZ_JAVRJX010000001.1 Protein Homology CDS 791506 792420 . - 0 ID=cds-WP_107375352.1;Parent=gene-RM610_RS03775;Dbxref=GenBank:WP_107375352.1;Name=WP_107375352.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425084.1;locus_tag=RM610_RS03775;product=EamA family transporter RarD;protein_id=WP_107375352.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 792472 793596 . - . ID=gene-RM610_RS03780;Name=RM610_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03780;old_locus_tag=RM610_03795 NZ_JAVRJX010000001.1 Protein Homology CDS 792472 793596 . - 0 ID=cds-WP_037573700.1;Parent=gene-RM610_RS03780;Dbxref=GenBank:WP_037573700.1;Name=WP_037573700.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425085.1;locus_tag=RM610_RS03780;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_037573700.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 793794 794175 . - . ID=gene-RM610_RS03785;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=RM610_RS03785;old_locus_tag=RM610_03800 NZ_JAVRJX010000001.1 cmsearch RNase_P_RNA 793794 794175 . - . ID=rna-RM610_RS03785;Parent=gene-RM610_RS03785;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS03785;product=RNase P RNA component class B NZ_JAVRJX010000001.1 cmsearch exon 793794 794175 . - . ID=exon-RM610_RS03785-1;Parent=rna-RM610_RS03785;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS03785;product=RNase P RNA component class B NZ_JAVRJX010000001.1 RefSeq gene 794218 794553 . - . ID=gene-RM610_RS03790;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=RM610_RS03790;old_locus_tag=RM610_03805 NZ_JAVRJX010000001.1 Protein Homology CDS 794218 794553 . - 0 ID=cds-WP_037573703.1;Parent=gene-RM610_RS03790;Dbxref=GenBank:WP_037573703.1;Name=WP_037573703.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=RM610_RS03790;product=cell division regulator GpsB;protein_id=WP_037573703.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 794575 795132 . - . ID=gene-RM610_RS03795;Name=RM610_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03795;old_locus_tag=RM610_03810 NZ_JAVRJX010000001.1 Protein Homology CDS 794575 795132 . - 0 ID=cds-WP_311541734.1;Parent=gene-RM610_RS03795;Dbxref=GenBank:WP_311541734.1;Name=WP_311541734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480952.1;locus_tag=RM610_RS03795;product=SLOG family protein;protein_id=WP_311541734.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 795125 795457 . - . ID=gene-RM610_RS03800;Name=RM610_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03800;old_locus_tag=RM610_03815 NZ_JAVRJX010000001.1 Protein Homology CDS 795125 795457 . - 0 ID=cds-WP_107358916.1;Parent=gene-RM610_RS03800;Dbxref=GenBank:WP_107358916.1;Name=WP_107358916.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020386.7;locus_tag=RM610_RS03800;product=DUF1798 family protein;protein_id=WP_107358916.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 795973 796599 . + . ID=gene-RM610_RS03805;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=RM610_RS03805;old_locus_tag=RM610_03820 NZ_JAVRJX010000001.1 Protein Homology CDS 795973 796599 . + 0 ID=cds-WP_107358915.1;Parent=gene-RM610_RS03805;Dbxref=GenBank:WP_107358915.1;Name=WP_107358915.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=RM610_RS03805;product=Holliday junction resolvase RecU;protein_id=WP_107358915.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 796596 798785 . + . ID=gene-RM610_RS03810;Name=RM610_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03810;old_locus_tag=RM610_03825 NZ_JAVRJX010000001.1 Protein Homology CDS 796596 798785 . + 0 ID=cds-WP_107358914.1;Parent=gene-RM610_RS03810;Dbxref=GenBank:WP_107358914.1;Name=WP_107358914.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167620.1;locus_tag=RM610_RS03810;product=transglycosylase domain-containing protein;protein_id=WP_107358914.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 798901 799269 . - . ID=gene-RM610_RS03815;Name=RM610_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03815;old_locus_tag=RM610_03830 NZ_JAVRJX010000001.1 Protein Homology CDS 798901 799269 . - 0 ID=cds-WP_107358913.1;Parent=gene-RM610_RS03815;Dbxref=GenBank:WP_107358913.1;Name=WP_107358913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425092.1;locus_tag=RM610_RS03815;product=YpoC family protein;protein_id=WP_107358913.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 799266 799940 . - . ID=gene-RM610_RS03820;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=RM610_RS03820;old_locus_tag=RM610_03835 NZ_JAVRJX010000001.1 Protein Homology CDS 799266 799940 . - 0 ID=cds-WP_107358912.1;Parent=gene-RM610_RS03820;Dbxref=GenBank:WP_107358912.1;Name=WP_107358912.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=RM610_RS03820;product=endonuclease III;protein_id=WP_107358912.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 799930 800622 . - . ID=gene-RM610_RS03825;Name=RM610_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03825;old_locus_tag=RM610_03840 NZ_JAVRJX010000001.1 Protein Homology CDS 799930 800622 . - 0 ID=cds-WP_037573723.1;Parent=gene-RM610_RS03825;Dbxref=GenBank:WP_037573723.1;Name=WP_037573723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=RM610_RS03825;product=DnaD domain-containing protein;protein_id=WP_037573723.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 800707 801999 . - . ID=gene-RM610_RS03830;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=RM610_RS03830;old_locus_tag=RM610_03845 NZ_JAVRJX010000001.1 Protein Homology CDS 800707 801999 . - 0 ID=cds-WP_107358911.1;Parent=gene-RM610_RS03830;Dbxref=GenBank:WP_107358911.1;Name=WP_107358911.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=RM610_RS03830;product=asparagine--tRNA ligase;protein_id=WP_107358911.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 802094 804784 . - . ID=gene-RM610_RS03835;Name=RM610_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03835;old_locus_tag=RM610_03850 NZ_JAVRJX010000001.1 Protein Homology CDS 802094 804784 . - 0 ID=cds-WP_311541735.1;Parent=gene-RM610_RS03835;Dbxref=GenBank:WP_311541735.1;Name=WP_311541735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499990.1;locus_tag=RM610_RS03835;product=ATP-dependent DNA helicase DinG%2C 3'-5' exoribonuclease type;protein_id=WP_311541735.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 804804 805775 . - . ID=gene-RM610_RS03840;Name=RM610_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03840;old_locus_tag=RM610_03855 NZ_JAVRJX010000001.1 Protein Homology CDS 804804 805775 . - 0 ID=cds-WP_107358909.1;Parent=gene-RM610_RS03840;Dbxref=GenBank:WP_107358909.1;Name=WP_107358909.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=RM610_RS03840;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_107358909.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 805762 806964 . - . ID=gene-RM610_RS03845;Name=RM610_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03845;old_locus_tag=RM610_03860 NZ_JAVRJX010000001.1 Protein Homology CDS 805762 806964 . - 0 ID=cds-WP_107375356.1;Parent=gene-RM610_RS03845;Dbxref=GenBank:WP_107375356.1;Name=WP_107375356.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176303.1;locus_tag=RM610_RS03845;product=CCA tRNA nucleotidyltransferase;protein_id=WP_107375356.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 806957 808093 . - . ID=gene-RM610_RS03850;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=RM610_RS03850;old_locus_tag=RM610_03865 NZ_JAVRJX010000001.1 Protein Homology CDS 806957 808093 . - 0 ID=cds-WP_107358907.1;Parent=gene-RM610_RS03850;Dbxref=GenBank:WP_107358907.1;Name=WP_107358907.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383771.1;locus_tag=RM610_RS03850;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_107358907.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 808110 808430 . - . ID=gene-RM610_RS03855;Name=RM610_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03855;old_locus_tag=RM610_03870 NZ_JAVRJX010000001.1 Protein Homology CDS 808110 808430 . - 0 ID=cds-WP_107381462.1;Parent=gene-RM610_RS03855;Dbxref=GenBank:WP_107381462.1;Name=WP_107381462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507577.1;locus_tag=RM610_RS03855;product=nucleotide pyrophosphohydrolase;protein_id=WP_107381462.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 808576 809271 . - . ID=gene-RM610_RS03860;Name=RM610_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03860;old_locus_tag=RM610_03875 NZ_JAVRJX010000001.1 Protein Homology CDS 808576 809271 . - 0 ID=cds-WP_103159460.1;Parent=gene-RM610_RS03860;Dbxref=GenBank:WP_103159460.1;Name=WP_103159460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468925.1;locus_tag=RM610_RS03860;product=zinc metallopeptidase;protein_id=WP_103159460.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 809308 809910 . - . ID=gene-RM610_RS03865;Name=RM610_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03865;old_locus_tag=RM610_03880 NZ_JAVRJX010000001.1 Protein Homology CDS 809308 809910 . - 0 ID=cds-WP_107375357.1;Parent=gene-RM610_RS03865;Dbxref=GenBank:WP_107375357.1;Name=WP_107375357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507575.1;locus_tag=RM610_RS03865;product=DUF1405 domain-containing protein;protein_id=WP_107375357.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 809915 810475 . - . ID=gene-RM610_RS03870;Name=RM610_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03870;old_locus_tag=RM610_03885 NZ_JAVRJX010000001.1 Protein Homology CDS 809915 810475 . - 0 ID=cds-WP_107369256.1;Parent=gene-RM610_RS03870;Dbxref=GenBank:WP_107369256.1;Name=WP_107369256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020439.7;locus_tag=RM610_RS03870;product=YpiB family protein;protein_id=WP_107369256.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 810487 811728 . - . ID=gene-RM610_RS03875;Name=RM610_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03875;old_locus_tag=RM610_03890 NZ_JAVRJX010000001.1 Protein Homology CDS 810487 811728 . - 0 ID=cds-WP_311541736.1;Parent=gene-RM610_RS03875;Dbxref=GenBank:WP_311541736.1;Name=WP_311541736.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167607.1;locus_tag=RM610_RS03875;product=tetratricopeptide repeat protein;protein_id=WP_311541736.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 811730 813019 . - . ID=gene-RM610_RS03880;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=RM610_RS03880;old_locus_tag=RM610_03895 NZ_JAVRJX010000001.1 Protein Homology CDS 811730 813019 . - 0 ID=cds-WP_107522334.1;Parent=gene-RM610_RS03880;Dbxref=GenBank:WP_107522334.1;Name=WP_107522334.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=RM610_RS03880;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_107522334.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 813020 814087 . - . ID=gene-RM610_RS03885;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=RM610_RS03885;old_locus_tag=RM610_03900 NZ_JAVRJX010000001.1 Protein Homology CDS 813020 814087 . - 0 ID=cds-WP_311541737.1;Parent=gene-RM610_RS03885;Dbxref=GenBank:WP_311541737.1;Name=WP_311541737.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=RM610_RS03885;product=3-dehydroquinate synthase;protein_id=WP_311541737.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 814100 815266 . - . ID=gene-RM610_RS03890;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=RM610_RS03890;old_locus_tag=RM610_03905 NZ_JAVRJX010000001.1 Protein Homology CDS 814100 815266 . - 0 ID=cds-WP_107369258.1;Parent=gene-RM610_RS03890;Dbxref=GenBank:WP_107369258.1;Name=WP_107369258.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=RM610_RS03890;product=chorismate synthase;protein_id=WP_107369258.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 815484 815933 . - . ID=gene-RM610_RS03895;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=RM610_RS03895;old_locus_tag=RM610_03910 NZ_JAVRJX010000001.1 Protein Homology CDS 815484 815933 . - 0 ID=cds-WP_107358899.1;Parent=gene-RM610_RS03895;Dbxref=GenBank:WP_107358899.1;Name=WP_107358899.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463054.1;locus_tag=RM610_RS03895;product=nucleoside-diphosphate kinase;protein_id=WP_107358899.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 816015 816971 . - . ID=gene-RM610_RS03900;Name=RM610_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03900;old_locus_tag=RM610_03915 NZ_JAVRJX010000001.1 Protein Homology CDS 816015 816971 . - 0 ID=cds-WP_107358898.1;Parent=gene-RM610_RS03900;Dbxref=GenBank:WP_107358898.1;Name=WP_107358898.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=RM610_RS03900;product=polyprenyl synthetase family protein;protein_id=WP_107358898.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 816987 817697 . - . ID=gene-RM610_RS03905;Name=RM610_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03905;old_locus_tag=RM610_03920 NZ_JAVRJX010000001.1 Protein Homology CDS 816987 817697 . - 0 ID=cds-WP_037573770.1;Parent=gene-RM610_RS03905;Dbxref=GenBank:WP_037573770.1;Name=WP_037573770.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480974.1;locus_tag=RM610_RS03905;product=demethylmenaquinone methyltransferase;protein_id=WP_037573770.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 817690 818277 . - . ID=gene-RM610_RS03910;Name=RM610_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03910;old_locus_tag=RM610_03925 NZ_JAVRJX010000001.1 Protein Homology CDS 817690 818277 . - 0 ID=cds-WP_107375359.1;Parent=gene-RM610_RS03910;Dbxref=GenBank:WP_107375359.1;Name=WP_107375359.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: protein motif:HMM:NF046766.4;locus_tag=RM610_RS03910;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_107375359.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 818565 818837 . - . ID=gene-RM610_RS03915;Name=hbs;gbkey=Gene;gene=hbs;gene_biotype=protein_coding;gene_synonym=hbsU,hupA;locus_tag=RM610_RS03915;old_locus_tag=RM610_03930 NZ_JAVRJX010000001.1 Protein Homology CDS 818565 818837 . - 0 ID=cds-WP_037564282.1;Parent=gene-RM610_RS03915;Dbxref=GenBank:WP_037564282.1;Name=WP_037564282.1;Ontology_term=GO:0006270,GO:0030261,GO:0003677,GO:0030527,GO:0042802;gbkey=CDS;gene=hbs;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA,identical protein binding|0042802||IEA;go_process=DNA replication initiation|0006270||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=RM610_RS03915;product=non-specific DNA-binding protein Hbs;protein_id=WP_037564282.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 819125 820123 . - . ID=gene-RM610_RS03920;Name=RM610_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03920;old_locus_tag=RM610_03935 NZ_JAVRJX010000001.1 Protein Homology CDS 819125 820123 . - 0 ID=cds-WP_107358955.1;Parent=gene-RM610_RS03920;Dbxref=GenBank:WP_107358955.1;Name=WP_107358955.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=RM610_RS03920;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_107358955.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 820140 821450 . - . ID=gene-RM610_RS03925;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=RM610_RS03925;old_locus_tag=RM610_03940 NZ_JAVRJX010000001.1 Protein Homology CDS 820140 821450 . - 0 ID=cds-WP_037573775.1;Parent=gene-RM610_RS03925;Dbxref=GenBank:WP_037573775.1;Name=WP_037573775.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=RM610_RS03925;product=ribosome biogenesis GTPase Der;protein_id=WP_037573775.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 821766 822950 . - . ID=gene-RM610_RS03930;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=RM610_RS03930;old_locus_tag=RM610_03945 NZ_JAVRJX010000001.1 Protein Homology CDS 821766 822950 . - 0 ID=cds-WP_311541739.1;Parent=gene-RM610_RS03930;Dbxref=GenBank:WP_311541739.1;Name=WP_311541739.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382440.1;locus_tag=RM610_RS03930;product=30S ribosomal protein S1;protein_id=WP_311541739.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 823182 823853 . - . ID=gene-RM610_RS03935;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=RM610_RS03935;old_locus_tag=RM610_03950 NZ_JAVRJX010000001.1 Protein Homology CDS 823182 823853 . - 0 ID=cds-WP_107358895.1;Parent=gene-RM610_RS03935;Dbxref=GenBank:WP_107358895.1;Name=WP_107358895.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451130.1;locus_tag=RM610_RS03935;product=(d)CMP kinase;protein_id=WP_107358895.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 823926 824894 . + . ID=gene-RM610_RS03940;Name=RM610_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03940;old_locus_tag=RM610_03955 NZ_JAVRJX010000001.1 Protein Homology CDS 823926 824894 . + 0 ID=cds-WP_107358894.1;Parent=gene-RM610_RS03940;Dbxref=GenBank:WP_107358894.1;Name=WP_107358894.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=obsolete asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=RM610_RS03940;product=asparaginase;protein_id=WP_107358894.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 825070 826056 . - . ID=gene-RM610_RS03945;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=RM610_RS03945;old_locus_tag=RM610_03960 NZ_JAVRJX010000001.1 Protein Homology CDS 825070 826056 . - 0 ID=cds-WP_107369263.1;Parent=gene-RM610_RS03945;Dbxref=GenBank:WP_107369263.1;Name=WP_107369263.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=RM610_RS03945;product=bacillithiol disulfide reductase YpdA;protein_id=WP_107369263.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 826333 828213 . - . ID=gene-RM610_RS03950;Name=RM610_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03950;old_locus_tag=RM610_03965 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 826333 828213 . - 0 ID=cds-WP_311541740.1;Parent=gene-RM610_RS03950;Dbxref=GenBank:WP_311541740.1;Name=WP_311541740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS03950;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311541740.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 828392 829768 . - . ID=gene-RM610_RS03955;Name=RM610_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03955;old_locus_tag=RM610_03970 NZ_JAVRJX010000001.1 Protein Homology CDS 828392 829768 . - 0 ID=cds-WP_107376136.1;Parent=gene-RM610_RS03955;Dbxref=GenBank:WP_107376136.1;Name=WP_107376136.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472147.1;locus_tag=RM610_RS03955;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_107376136.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 829761 830711 . - . ID=gene-RM610_RS03960;Name=RM610_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03960;old_locus_tag=RM610_03975 NZ_JAVRJX010000001.1 Protein Homology CDS 829761 830711 . - 0 ID=cds-WP_107358890.1;Parent=gene-RM610_RS03960;Dbxref=GenBank:WP_107358890.1;Name=WP_107358890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025846.7;locus_tag=RM610_RS03960;product=helix-turn-helix domain-containing protein;protein_id=WP_107358890.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 830817 831065 . + . ID=gene-RM610_RS03965;Name=RM610_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03965;old_locus_tag=RM610_03980 NZ_JAVRJX010000001.1 Protein Homology CDS 830817 831065 . + 0 ID=cds-WP_037573797.1;Parent=gene-RM610_RS03965;Dbxref=GenBank:WP_037573797.1;Name=WP_037573797.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=RM610_RS03965;product=ferredoxin;protein_id=WP_037573797.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 831140 831694 . - . ID=gene-RM610_RS03970;Name=RM610_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03970;old_locus_tag=RM610_03985 NZ_JAVRJX010000001.1 Protein Homology CDS 831140 831694 . - 0 ID=cds-WP_105962825.1;Parent=gene-RM610_RS03970;Dbxref=GenBank:WP_105962825.1;Name=WP_105962825.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637951.1;locus_tag=RM610_RS03970;product=ECF transporter S component;protein_id=WP_105962825.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 832015 833754 . - . ID=gene-RM610_RS03975;Name=RM610_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03975;old_locus_tag=RM610_03990 NZ_JAVRJX010000001.1 Protein Homology CDS 832015 833754 . - 0 ID=cds-WP_107358889.1;Parent=gene-RM610_RS03975;Dbxref=GenBank:WP_107358889.1;Name=WP_107358889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500100.1;locus_tag=RM610_RS03975;product=ATP-binding protein;protein_id=WP_107358889.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 833738 834463 . - . ID=gene-RM610_RS03980;Name=RM610_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03980;old_locus_tag=RM610_03995 NZ_JAVRJX010000001.1 Protein Homology CDS 833738 834463 . - 0 ID=cds-WP_107358888.1;Parent=gene-RM610_RS03980;Dbxref=GenBank:WP_107358888.1;Name=WP_107358888.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483235.1;locus_tag=RM610_RS03980;product=response regulator transcription factor;protein_id=WP_107358888.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 834633 835376 . - . ID=gene-RM610_RS03985;Name=RM610_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03985;old_locus_tag=RM610_04000 NZ_JAVRJX010000001.1 Protein Homology CDS 834633 835376 . - 0 ID=cds-WP_107358887.1;Parent=gene-RM610_RS03985;Dbxref=GenBank:WP_107358887.1;Name=WP_107358887.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382455.1;locus_tag=RM610_RS03985;product=pseudouridine synthase;protein_id=WP_107358887.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 835373 835918 . - . ID=gene-RM610_RS03990;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=RM610_RS03990;old_locus_tag=RM610_04005 NZ_JAVRJX010000001.1 Protein Homology CDS 835373 835918 . - 0 ID=cds-WP_107358886.1;Parent=gene-RM610_RS03990;Dbxref=GenBank:WP_107358886.1;Name=WP_107358886.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=RM610_RS03990;product=SMC-Scp complex subunit ScpB;protein_id=WP_107358886.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 835902 836636 . - . ID=gene-RM610_RS03995;Name=RM610_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS03995;old_locus_tag=RM610_04010 NZ_JAVRJX010000001.1 Protein Homology CDS 835902 836636 . - 0 ID=cds-WP_107376139.1;Parent=gene-RM610_RS03995;Dbxref=GenBank:WP_107376139.1;Name=WP_107376139.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465785.1;locus_tag=RM610_RS03995;product=segregation and condensation protein A;protein_id=WP_107376139.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 836732 837235 . + . ID=gene-RM610_RS04000;Name=RM610_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04000;old_locus_tag=RM610_04015 NZ_JAVRJX010000001.1 Protein Homology CDS 836732 837235 . + 0 ID=cds-WP_107358884.1;Parent=gene-RM610_RS04000;Dbxref=GenBank:WP_107358884.1;Name=WP_107358884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483231.1;locus_tag=RM610_RS04000;product=DUF309 domain-containing protein;protein_id=WP_107358884.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 837257 838144 . - . ID=gene-RM610_RS04005;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=RM610_RS04005;old_locus_tag=RM610_04020 NZ_JAVRJX010000001.1 Protein Homology CDS 837257 838144 . - 0 ID=cds-WP_103159476.1;Parent=gene-RM610_RS04005;Dbxref=GenBank:WP_103159476.1;Name=WP_103159476.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425129.1;locus_tag=RM610_RS04005;product=site-specific tyrosine recombinase XerD;protein_id=WP_103159476.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 838184 838636 . - . ID=gene-RM610_RS04010;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=RM610_RS04010;old_locus_tag=RM610_04025 NZ_JAVRJX010000001.1 Protein Homology CDS 838184 838636 . - 0 ID=cds-WP_037573825.1;Parent=gene-RM610_RS04010;Dbxref=GenBank:WP_037573825.1;Name=WP_037573825.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016186688.1;locus_tag=RM610_RS04010;product=ferric iron uptake transcriptional regulator;protein_id=WP_037573825.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 838740 839282 . - . ID=gene-RM610_RS04015;Name=RM610_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04015;old_locus_tag=RM610_04030 NZ_JAVRJX010000001.1 Protein Homology CDS 838740 839282 . - 0 ID=cds-WP_107358882.1;Parent=gene-RM610_RS04015;Dbxref=GenBank:WP_107358882.1;Name=WP_107358882.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465769.1;locus_tag=RM610_RS04015;product=NUDIX hydrolase;protein_id=WP_107358882.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 839361 840269 . + . ID=gene-RM610_RS04020;Name=RM610_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04020;old_locus_tag=RM610_04035 NZ_JAVRJX010000001.1 Protein Homology CDS 839361 840269 . + 0 ID=cds-WP_107369269.1;Parent=gene-RM610_RS04020;Dbxref=GenBank:WP_107369269.1;Name=WP_107369269.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500109.1;locus_tag=RM610_RS04020;product=aldo/keto reductase;protein_id=WP_107369269.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 840598 841416 . + . ID=gene-RM610_RS04025;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=RM610_RS04025;old_locus_tag=RM610_04040 NZ_JAVRJX010000001.1 Protein Homology CDS 840598 841416 . + 0 ID=cds-WP_105985530.1;Parent=gene-RM610_RS04025;Dbxref=GenBank:WP_105985530.1;Name=WP_105985530.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468364.1;locus_tag=RM610_RS04025;product=pyrroline-5-carboxylate reductase;protein_id=WP_105985530.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 841509 842426 . - . ID=gene-RM610_RS04030;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=RM610_RS04030;old_locus_tag=RM610_04045 NZ_JAVRJX010000001.1 Protein Homology CDS 841509 842426 . - 0 ID=cds-WP_107358880.1;Parent=gene-RM610_RS04030;Dbxref=GenBank:WP_107358880.1;Name=WP_107358880.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483224.1;locus_tag=RM610_RS04030;product=ribonuclease Z;protein_id=WP_107358880.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 842587 844071 . + . ID=gene-RM610_RS04035;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=RM610_RS04035;old_locus_tag=RM610_04050 NZ_JAVRJX010000001.1 Protein Homology CDS 842587 844071 . + 0 ID=cds-WP_107375948.1;Parent=gene-RM610_RS04035;Dbxref=GenBank:WP_107375948.1;Name=WP_107375948.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382473.1;locus_tag=RM610_RS04035;product=glucose-6-phosphate dehydrogenase;protein_id=WP_107375948.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 844175 845032 . + . ID=gene-RM610_RS04040;Name=RM610_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04040;old_locus_tag=RM610_04055 NZ_JAVRJX010000001.1 Protein Homology CDS 844175 845032 . + 0 ID=cds-WP_311541741.1;Parent=gene-RM610_RS04040;Dbxref=GenBank:WP_311541741.1;Name=WP_311541741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511212.1;locus_tag=RM610_RS04040;product=effector binding domain-containing protein;protein_id=WP_311541741.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 845170 846573 . - . ID=gene-RM610_RS04045;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=RM610_RS04045;old_locus_tag=RM610_04060 NZ_JAVRJX010000001.1 Protein Homology CDS 845170 846573 . - 0 ID=cds-WP_107358877.1;Parent=gene-RM610_RS04045;Dbxref=GenBank:WP_107358877.1;Name=WP_107358877.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=RM610_RS04045;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_107358877.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 846665 847777 . - . ID=gene-RM610_RS04050;Name=RM610_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04050;old_locus_tag=RM610_04065 NZ_JAVRJX010000001.1 Protein Homology CDS 846665 847777 . - 0 ID=cds-WP_107358876.1;Parent=gene-RM610_RS04050;Dbxref=GenBank:WP_107358876.1;Name=WP_107358876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425139.1;locus_tag=RM610_RS04050;product=tripeptidase T;protein_id=WP_107358876.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 847955 848056 . + . ID=gene-RM610_RS04055;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=RM610_RS04055;old_locus_tag=RM610_04070 NZ_JAVRJX010000001.1 Protein Homology CDS 847955 848056 . + 0 ID=cds-WP_150130324.1;Parent=gene-RM610_RS04055;Dbxref=GenBank:WP_150130324.1;Name=WP_150130324.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=RM610_RS04055;product=stressosome-associated protein Prli42;protein_id=WP_150130324.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 848108 849085 . - . ID=gene-RM610_RS04060;Name=RM610_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04060;old_locus_tag=RM610_04075 NZ_JAVRJX010000001.1 Protein Homology CDS 848108 849085 . - 0 ID=cds-WP_107358875.1;Parent=gene-RM610_RS04060;Dbxref=GenBank:WP_107358875.1;Name=WP_107358875.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=RM610_RS04060;product=aromatic acid exporter family protein;protein_id=WP_107358875.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 849097 849534 . - . ID=gene-RM610_RS04065;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=RM610_RS04065;old_locus_tag=RM610_04080 NZ_JAVRJX010000001.1 Protein Homology CDS 849097 849534 . - 0 ID=cds-WP_105985523.1;Parent=gene-RM610_RS04065;Dbxref=GenBank:WP_105985523.1;Name=WP_105985523.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=RM610_RS04065;product=bacilliredoxin BrxB;protein_id=WP_105985523.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 849599 850861 . - . ID=gene-RM610_RS04070;Name=RM610_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04070;old_locus_tag=RM610_04085 NZ_JAVRJX010000001.1 Protein Homology CDS 849599 850861 . - 0 ID=cds-WP_311541742.1;Parent=gene-RM610_RS04070;Dbxref=GenBank:WP_311541742.1;Name=WP_311541742.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168728.1;locus_tag=RM610_RS04070;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_311541742.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 850873 851856 . - . ID=gene-RM610_RS04075;Name=RM610_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04075;old_locus_tag=RM610_04090 NZ_JAVRJX010000001.1 Protein Homology CDS 850873 851856 . - 0 ID=cds-WP_107358873.1;Parent=gene-RM610_RS04075;Dbxref=GenBank:WP_107358873.1;Name=WP_107358873.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=RM610_RS04075;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_107358873.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 851849 852847 . - . ID=gene-RM610_RS04080;Name=RM610_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04080;old_locus_tag=RM610_04095 NZ_JAVRJX010000001.1 Protein Homology CDS 851849 852847 . - 0 ID=cds-WP_311541744.1;Parent=gene-RM610_RS04080;Dbxref=GenBank:WP_311541744.1;Name=WP_311541744.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303044.1;locus_tag=RM610_RS04080;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_311541744.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 852870 854288 . - . ID=gene-RM610_RS04085;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM610_RS04085;old_locus_tag=RM610_04100 NZ_JAVRJX010000001.1 Protein Homology CDS 852870 854288 . - 0 ID=cds-WP_311541745.1;Parent=gene-RM610_RS04085;Dbxref=GenBank:WP_311541745.1;Name=WP_311541745.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=RM610_RS04085;product=dihydrolipoyl dehydrogenase;protein_id=WP_311541745.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 854300 855358 . - . ID=gene-RM610_RS04090;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=RM610_RS04090;old_locus_tag=RM610_04105 NZ_JAVRJX010000001.1 Protein Homology CDS 854300 855358 . - 0 ID=cds-WP_107358870.1;Parent=gene-RM610_RS04090;Dbxref=GenBank:WP_107358870.1;Name=WP_107358870.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900390.1;locus_tag=RM610_RS04090;product=butyrate kinase;protein_id=WP_107358870.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 855413 856312 . - . ID=gene-RM610_RS04095;Name=RM610_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04095;old_locus_tag=RM610_04110 NZ_JAVRJX010000001.1 Protein Homology CDS 855413 856312 . - 0 ID=cds-WP_311541746.1;Parent=gene-RM610_RS04095;Dbxref=GenBank:WP_311541746.1;Name=WP_311541746.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613846.1;locus_tag=RM610_RS04095;product=phosphate acyltransferase;protein_id=WP_311541746.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 856324 857997 . - . ID=gene-RM610_RS04100;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=RM610_RS04100;old_locus_tag=RM610_04115 NZ_JAVRJX010000001.1 Protein Homology CDS 856324 857997 . - 0 ID=cds-WP_107358868.1;Parent=gene-RM610_RS04100;Dbxref=GenBank:WP_107358868.1;Name=WP_107358868.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500130.1;locus_tag=RM610_RS04100;product=DNA repair protein RecN;protein_id=WP_107358868.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 858010 858462 . - . ID=gene-RM610_RS04105;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=RM610_RS04105;old_locus_tag=RM610_04120 NZ_JAVRJX010000001.1 Protein Homology CDS 858010 858462 . - 0 ID=cds-WP_107358867.1;Parent=gene-RM610_RS04105;Dbxref=GenBank:WP_107358867.1;Name=WP_107358867.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=RM610_RS04105;product=transcriptional regulator AhrC/ArgR;protein_id=WP_107358867.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 858663 860552 . - . ID=gene-RM610_RS04110;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=RM610_RS04110;old_locus_tag=RM610_04125 NZ_JAVRJX010000001.1 Protein Homology CDS 858663 860552 . - 0 ID=cds-WP_107358866.1;Parent=gene-RM610_RS04110;Dbxref=GenBank:WP_107358866.1;Name=WP_107358866.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010303150.1;locus_tag=RM610_RS04110;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_107358866.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 860588 861472 . - . ID=gene-RM610_RS04115;Name=RM610_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04115;old_locus_tag=RM610_04130 NZ_JAVRJX010000001.1 Protein Homology CDS 860588 861472 . - 0 ID=cds-WP_107358865.1;Parent=gene-RM610_RS04115;Dbxref=GenBank:WP_107358865.1;Name=WP_107358865.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507525.1;locus_tag=RM610_RS04115;product=polyprenyl synthetase family protein;protein_id=WP_107358865.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 861450 861674 . - . ID=gene-RM610_RS04120;Name=RM610_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04120;old_locus_tag=RM610_04135 NZ_JAVRJX010000001.1 Protein Homology CDS 861450 861674 . - 0 ID=cds-WP_107358864.1;Parent=gene-RM610_RS04120;Dbxref=GenBank:WP_107358864.1;Name=WP_107358864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=RM610_RS04120;product=exodeoxyribonuclease VII small subunit;protein_id=WP_107358864.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 861658 863004 . - . ID=gene-RM610_RS04125;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=RM610_RS04125;old_locus_tag=RM610_04140 NZ_JAVRJX010000001.1 Protein Homology CDS 861658 863004 . - 0 ID=cds-WP_311541748.1;Parent=gene-RM610_RS04125;Dbxref=GenBank:WP_311541748.1;Name=WP_311541748.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=RM610_RS04125;product=exodeoxyribonuclease VII large subunit;protein_id=WP_311541748.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 863013 863405 . - . ID=gene-RM610_RS04130;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=RM610_RS04130;old_locus_tag=RM610_04145 NZ_JAVRJX010000001.1 Protein Homology CDS 863013 863405 . - 0 ID=cds-WP_105985512.1;Parent=gene-RM610_RS04130;Dbxref=GenBank:WP_105985512.1;Name=WP_105985512.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=RM610_RS04130;product=transcription antitermination factor NusB;protein_id=WP_105985512.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 863427 863801 . - . ID=gene-RM610_RS04135;Name=RM610_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04135;old_locus_tag=RM610_04150 NZ_JAVRJX010000001.1 Protein Homology CDS 863427 863801 . - 0 ID=cds-WP_105985511.1;Parent=gene-RM610_RS04135;Dbxref=GenBank:WP_105985511.1;Name=WP_105985511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=RM610_RS04135;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_105985511.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 863824 865179 . - . ID=gene-RM610_RS04140;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=RM610_RS04140;old_locus_tag=RM610_04155 NZ_JAVRJX010000001.1 Protein Homology CDS 863824 865179 . - 0 ID=cds-WP_107358862.1;Parent=gene-RM610_RS04140;Dbxref=GenBank:WP_107358862.1;Name=WP_107358862.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500137.1;locus_tag=RM610_RS04140;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_107358862.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 865181 865639 . - . ID=gene-RM610_RS04145;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=RM610_RS04145;old_locus_tag=RM610_04160 NZ_JAVRJX010000001.1 Protein Homology CDS 865181 865639 . - 0 ID=cds-WP_107358861.1;Parent=gene-RM610_RS04145;Dbxref=GenBank:WP_107358861.1;Name=WP_107358861.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451908.1;locus_tag=RM610_RS04145;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_107358861.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 865855 866412 . - . ID=gene-RM610_RS04150;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=RM610_RS04150;old_locus_tag=RM610_04165 NZ_JAVRJX010000001.1 Protein Homology CDS 865855 866412 . - 0 ID=cds-WP_037573865.1;Parent=gene-RM610_RS04150;Dbxref=GenBank:WP_037573865.1;Name=WP_037573865.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275683.1;locus_tag=RM610_RS04150;product=elongation factor P;protein_id=WP_037573865.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 866440 867501 . - . ID=gene-RM610_RS04155;Name=RM610_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04155;old_locus_tag=RM610_04170 NZ_JAVRJX010000001.1 Protein Homology CDS 866440 867501 . - 0 ID=cds-WP_107358860.1;Parent=gene-RM610_RS04155;Dbxref=GenBank:WP_107358860.1;Name=WP_107358860.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425159.1;locus_tag=RM610_RS04155;product=M24 family metallopeptidase;protein_id=WP_107358860.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 867593 868195 . + . ID=gene-RM610_RS04160;Name=RM610_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04160;old_locus_tag=RM610_04175 NZ_JAVRJX010000001.1 Protein Homology CDS 867593 868195 . + 0 ID=cds-WP_311541749.1;Parent=gene-RM610_RS04160;Dbxref=GenBank:WP_311541749.1;Name=WP_311541749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425160.1;locus_tag=RM610_RS04160;product=hypothetical protein;protein_id=WP_311541749.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 868207 868431 . + . ID=gene-RM610_RS04165;Name=RM610_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04165;old_locus_tag=RM610_04180 NZ_JAVRJX010000001.1 Protein Homology CDS 868207 868431 . + 0 ID=cds-WP_107358858.1;Parent=gene-RM610_RS04165;Dbxref=GenBank:WP_107358858.1;Name=WP_107358858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425161.1;locus_tag=RM610_RS04165;product=SA1362 family protein;protein_id=WP_107358858.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 868481 869311 . - . ID=gene-RM610_RS04170;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=RM610_RS04170;old_locus_tag=RM610_04185 NZ_JAVRJX010000001.1 Protein Homology CDS 868481 869311 . - 0 ID=cds-WP_107375959.1;Parent=gene-RM610_RS04170;Dbxref=GenBank:WP_107375959.1;Name=WP_107375959.1;Ontology_term=GO:0009107,GO:0009249,GO:0036211,GO:0033819;gbkey=CDS;gene=lipM;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=RM610_RS04170;product=octanoyltransferase LipM;protein_id=WP_107375959.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 869459 869845 . + . ID=gene-RM610_RS04175;Name=RM610_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04175;old_locus_tag=RM610_04190 NZ_JAVRJX010000001.1 Protein Homology CDS 869459 869845 . + 0 ID=cds-WP_037573877.1;Parent=gene-RM610_RS04175;Dbxref=GenBank:WP_037573877.1;Name=WP_037573877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572316.1;locus_tag=RM610_RS04175;product=rhodanese-like domain-containing protein;protein_id=WP_037573877.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 870002 871477 . - . ID=gene-RM610_RS04180;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=RM610_RS04180;old_locus_tag=RM610_04195 NZ_JAVRJX010000001.1 Protein Homology CDS 870002 871477 . - 0 ID=cds-WP_107358856.1;Parent=gene-RM610_RS04180;Dbxref=GenBank:WP_107358856.1;Name=WP_107358856.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382526.1;locus_tag=RM610_RS04180;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_107358856.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 871467 872816 . - . ID=gene-RM610_RS04185;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=RM610_RS04185;old_locus_tag=RM610_04200 NZ_JAVRJX010000001.1 Protein Homology CDS 871467 872816 . - 0 ID=cds-WP_107358855.1;Parent=gene-RM610_RS04185;Dbxref=GenBank:WP_107358855.1;Name=WP_107358855.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=RM610_RS04185;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_107358855.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 872829 873920 . - . ID=gene-RM610_RS04190;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=RM610_RS04190;old_locus_tag=RM610_04205 NZ_JAVRJX010000001.1 Protein Homology CDS 872829 873920 . - 0 ID=cds-WP_107521171.1;Parent=gene-RM610_RS04190;Dbxref=GenBank:WP_107521171.1;Name=WP_107521171.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=RM610_RS04190;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_107521171.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 873993 874086 . - . ID=id-NZ_JAVRJX010000001.1:873993..874086;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00504,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 874079 874597 . - . ID=gene-RM610_RS04195;Name=RM610_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04195;old_locus_tag=RM610_04210 NZ_JAVRJX010000001.1 Protein Homology CDS 874079 874597 . - 0 ID=cds-WP_311541750.1;Parent=gene-RM610_RS04195;Dbxref=GenBank:WP_311541750.1;Name=WP_311541750.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990833.1;locus_tag=RM610_RS04195;product=shikimate kinase;protein_id=WP_311541750.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 874762 875247 . - . ID=gene-RM610_RS04200;Name=RM610_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04200;old_locus_tag=RM610_04215 NZ_JAVRJX010000001.1 Protein Homology CDS 874762 875247 . - 0 ID=cds-WP_157946091.1;Parent=gene-RM610_RS04200;Dbxref=GenBank:WP_157946091.1;Name=WP_157946091.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027310.7;locus_tag=RM610_RS04200;product=competence type IV pilus minor pilin ComGF;protein_id=WP_157946091.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 875440 875871 . - . ID=gene-RM610_RS04205;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=RM610_RS04205;old_locus_tag=RM610_04220 NZ_JAVRJX010000001.1 Protein Homology CDS 875440 875871 . - 0 ID=cds-WP_051604961.1;Parent=gene-RM610_RS04205;Dbxref=GenBank:WP_051604961.1;Name=WP_051604961.1;gbkey=CDS;gene=comGD;inference=COORDINATES: protein motif:HMM:NF040982.1;locus_tag=RM610_RS04205;product=competence type IV pilus minor pilin ComGD;protein_id=WP_051604961.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 875861 876178 . - . ID=gene-RM610_RS04210;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=RM610_RS04210;old_locus_tag=RM610_04225 NZ_JAVRJX010000001.1 Protein Homology CDS 875861 876178 . - 0 ID=cds-WP_037573894.1;Parent=gene-RM610_RS04210;Dbxref=GenBank:WP_037573894.1;Name=WP_037573894.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464660.1;locus_tag=RM610_RS04210;product=competence type IV pilus major pilin ComGC;protein_id=WP_037573894.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 876193 877260 . - . ID=gene-RM610_RS04215;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=RM610_RS04215;old_locus_tag=RM610_04230 NZ_JAVRJX010000001.1 Protein Homology CDS 876193 877260 . - 0 ID=cds-WP_107522330.1;Parent=gene-RM610_RS04215;Dbxref=GenBank:WP_107522330.1;Name=WP_107522330.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=RM610_RS04215;product=competence type IV pilus assembly protein ComGB;protein_id=WP_107522330.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 877229 878203 . - . ID=gene-RM610_RS04220;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=RM610_RS04220;old_locus_tag=RM610_04235 NZ_JAVRJX010000001.1 Protein Homology CDS 877229 878203 . - 0 ID=cds-WP_037573899.1;Parent=gene-RM610_RS04220;Dbxref=GenBank:WP_037573899.1;Name=WP_037573899.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=RM610_RS04220;product=competence type IV pilus ATPase ComGA;protein_id=WP_037573899.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 878256 878879 . - . ID=gene-RM610_RS04225;Name=RM610_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04225;old_locus_tag=RM610_04240 NZ_JAVRJX010000001.1 Protein Homology CDS 878256 878879 . - 0 ID=cds-WP_107389290.1;Parent=gene-RM610_RS04225;Dbxref=GenBank:WP_107389290.1;Name=WP_107389290.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558017.1;locus_tag=RM610_RS04225;product=MBL fold metallo-hydrolase;protein_id=WP_107389290.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 878893 879204 . - . ID=gene-RM610_RS04230;Name=RM610_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04230;old_locus_tag=RM610_04245 NZ_JAVRJX010000001.1 Protein Homology CDS 878893 879204 . - 0 ID=cds-WP_105985493.1;Parent=gene-RM610_RS04230;Dbxref=GenBank:WP_105985493.1;Name=WP_105985493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433945.1;locus_tag=RM610_RS04230;product=MTH1187 family thiamine-binding protein;protein_id=WP_105985493.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 879205 880191 . - . ID=gene-RM610_RS04235;Name=RM610_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04235;old_locus_tag=RM610_04250 NZ_JAVRJX010000001.1 Protein Homology CDS 879205 880191 . - 0 ID=cds-WP_107376100.1;Parent=gene-RM610_RS04235;Dbxref=GenBank:WP_107376100.1;Name=WP_107376100.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=RM610_RS04235;product=ROK family glucokinase;protein_id=WP_107376100.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 880188 880391 . - . ID=gene-RM610_RS04240;Name=RM610_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04240;old_locus_tag=RM610_04255 NZ_JAVRJX010000001.1 Protein Homology CDS 880188 880391 . - 0 ID=cds-WP_037573910.1;Parent=gene-RM610_RS04240;Dbxref=GenBank:WP_037573910.1;Name=WP_037573910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=RM610_RS04240;product=YqgQ family protein;protein_id=WP_037573910.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 880393 881832 . - . ID=gene-RM610_RS04245;Name=RM610_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04245;old_locus_tag=RM610_04260 NZ_JAVRJX010000001.1 Protein Homology CDS 880393 881832 . - 0 ID=cds-WP_311541751.1;Parent=gene-RM610_RS04245;Dbxref=GenBank:WP_311541751.1;Name=WP_311541751.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=RM610_RS04245;product=rhomboid family intramembrane serine protease;protein_id=WP_311541751.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 881850 882389 . - . ID=gene-RM610_RS04250;Name=RM610_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04250;old_locus_tag=RM610_04265 NZ_JAVRJX010000001.1 Protein Homology CDS 881850 882389 . - 0 ID=cds-WP_311541752.1;Parent=gene-RM610_RS04250;Dbxref=GenBank:WP_311541752.1;Name=WP_311541752.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382545.1;locus_tag=RM610_RS04250;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_311541752.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 882585 882749 . - . ID=gene-RM610_RS04255;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM610_RS04255;old_locus_tag=RM610_04270 NZ_JAVRJX010000001.1 Protein Homology CDS 882585 882749 . - 0 ID=cds-WP_255201399.1;Parent=gene-RM610_RS04255;Dbxref=GenBank:WP_255201399.1;Name=WP_255201399.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM610_RS04255;product=50S ribosomal protein L33;protein_id=WP_255201399.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 882805 883452 . - . ID=gene-RM610_RS04260;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=RM610_RS04260;old_locus_tag=RM610_04275 NZ_JAVRJX010000001.1 Protein Homology CDS 882805 883452 . - 0 ID=cds-WP_107358843.1;Parent=gene-RM610_RS04260;Dbxref=GenBank:WP_107358843.1;Name=WP_107358843.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468770.1;locus_tag=RM610_RS04260;product=phosphate signaling complex protein PhoU;protein_id=WP_107358843.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 883457 884329 . - . ID=gene-RM610_RS04265;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=RM610_RS04265;old_locus_tag=RM610_04280 NZ_JAVRJX010000001.1 Protein Homology CDS 883457 884329 . - 0 ID=cds-WP_037573925.1;Parent=gene-RM610_RS04265;Dbxref=GenBank:WP_037573925.1;Name=WP_037573925.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165224.1;locus_tag=RM610_RS04265;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_037573925.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 884363 885241 . - . ID=gene-RM610_RS04270;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=RM610_RS04270;old_locus_tag=RM610_04285 NZ_JAVRJX010000001.1 Protein Homology CDS 884363 885241 . - 0 ID=cds-WP_107358841.1;Parent=gene-RM610_RS04270;Dbxref=GenBank:WP_107358841.1;Name=WP_107358841.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168690.1;locus_tag=RM610_RS04270;product=phosphate ABC transporter permease PstA;protein_id=WP_107358841.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 885243 886169 . - . ID=gene-RM610_RS04275;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=RM610_RS04275;old_locus_tag=RM610_04290 NZ_JAVRJX010000001.1 Protein Homology CDS 885243 886169 . - 0 ID=cds-WP_105985486.1;Parent=gene-RM610_RS04275;Dbxref=GenBank:WP_105985486.1;Name=WP_105985486.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453209.1;locus_tag=RM610_RS04275;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_105985486.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 886252 887223 . - . ID=gene-RM610_RS04280;Name=RM610_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04280;old_locus_tag=RM610_04295 NZ_JAVRJX010000001.1 Protein Homology CDS 886252 887223 . - 0 ID=cds-WP_107358840.1;Parent=gene-RM610_RS04280;Dbxref=GenBank:WP_107358840.1;Name=WP_107358840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425185.1;locus_tag=RM610_RS04280;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_107358840.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 887494 889530 . - . ID=gene-RM610_RS04285;Name=RM610_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04285;old_locus_tag=RM610_04300 NZ_JAVRJX010000001.1 Protein Homology CDS 887494 889530 . - 0 ID=cds-WP_311541753.1;Parent=gene-RM610_RS04285;Dbxref=GenBank:WP_311541753.1;Name=WP_311541753.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425186.1;locus_tag=RM610_RS04285;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_311541753.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 889756 890355 . - . ID=gene-RM610_RS04290;Name=RM610_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04290;old_locus_tag=RM610_04305 NZ_JAVRJX010000001.1 Protein Homology CDS 889756 890355 . - 0 ID=cds-WP_311541754.1;Parent=gene-RM610_RS04290;Dbxref=GenBank:WP_311541754.1;Name=WP_311541754.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=RM610_RS04290;product=superoxide dismutase;protein_id=WP_311541754.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 890684 891787 . + . ID=gene-RM610_RS04295;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=RM610_RS04295;old_locus_tag=RM610_04310 NZ_JAVRJX010000001.1 Protein Homology CDS 890684 891787 . + 0 ID=cds-WP_107358837.1;Parent=gene-RM610_RS04295;Dbxref=GenBank:WP_107358837.1;Name=WP_107358837.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219631.1;locus_tag=RM610_RS04295;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_107358837.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 891819 892229 . - . ID=gene-RM610_RS04300;Name=RM610_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04300;old_locus_tag=RM610_04315 NZ_JAVRJX010000001.1 Protein Homology CDS 891819 892229 . - 0 ID=cds-WP_107358836.1;Parent=gene-RM610_RS04300;Dbxref=GenBank:WP_107358836.1;Name=WP_107358836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500166.1;locus_tag=RM610_RS04300;product=Fur family transcriptional regulator;protein_id=WP_107358836.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 892230 893081 . - . ID=gene-RM610_RS04305;Name=RM610_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04305;old_locus_tag=RM610_04320 NZ_JAVRJX010000001.1 Protein Homology CDS 892230 893081 . - 0 ID=cds-WP_107358835.1;Parent=gene-RM610_RS04305;Dbxref=GenBank:WP_107358835.1;Name=WP_107358835.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613802.1;locus_tag=RM610_RS04305;product=metal ABC transporter permease;protein_id=WP_107358835.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 893078 893848 . - . ID=gene-RM610_RS04310;Name=RM610_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04310;old_locus_tag=RM610_04325 NZ_JAVRJX010000001.1 Protein Homology CDS 893078 893848 . - 0 ID=cds-WP_107358834.1;Parent=gene-RM610_RS04310;Dbxref=GenBank:WP_107358834.1;Name=WP_107358834.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455284.1;locus_tag=RM610_RS04310;product=metal ABC transporter ATP-binding protein;protein_id=WP_107358834.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 893986 894876 . - . ID=gene-RM610_RS04315;Name=RM610_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04315;old_locus_tag=RM610_04330 NZ_JAVRJX010000001.1 Protein Homology CDS 893986 894876 . - 0 ID=cds-WP_107364394.1;Parent=gene-RM610_RS04315;Dbxref=GenBank:WP_107364394.1;Name=WP_107364394.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425192.1;locus_tag=RM610_RS04315;product=deoxyribonuclease IV;protein_id=WP_107364394.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 894891 896231 . - . ID=gene-RM610_RS04320;Name=RM610_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04320;old_locus_tag=RM610_04335 NZ_JAVRJX010000001.1 Protein Homology CDS 894891 896231 . - 0 ID=cds-WP_107381586.1;Parent=gene-RM610_RS04320;Dbxref=GenBank:WP_107381586.1;Name=WP_107381586.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425193.1;locus_tag=RM610_RS04320;product=DEAD/DEAH box helicase;protein_id=WP_107381586.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 896417 897385 . + . ID=gene-RM610_RS04325;Name=RM610_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04325;old_locus_tag=RM610_04340 NZ_JAVRJX010000001.1 Protein Homology CDS 896417 897385 . + 0 ID=cds-WP_037574009.1;Parent=gene-RM610_RS04325;Dbxref=GenBank:WP_037574009.1;Name=WP_037574009.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=RM610_RS04325;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_037574009.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 897531 898631 . - . ID=gene-RM610_RS04330;Name=RM610_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04330;old_locus_tag=RM610_04345 NZ_JAVRJX010000001.1 Protein Homology CDS 897531 898631 . - 0 ID=cds-WP_311541755.1;Parent=gene-RM610_RS04330;Dbxref=GenBank:WP_311541755.1;Name=WP_311541755.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472473.1;locus_tag=RM610_RS04330;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_311541755.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 898628 899305 . - . ID=gene-RM610_RS04335;Name=RM610_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04335;old_locus_tag=RM610_04350 NZ_JAVRJX010000001.1 Protein Homology CDS 898628 899305 . - 0 ID=cds-WP_107376282.1;Parent=gene-RM610_RS04335;Dbxref=GenBank:WP_107376282.1;Name=WP_107376282.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=RM610_RS04335;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_107376282.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 899468 900577 . - . ID=gene-RM610_RS04340;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=RM610_RS04340;old_locus_tag=RM610_04355 NZ_JAVRJX010000001.1 Protein Homology CDS 899468 900577 . - 0 ID=cds-WP_019165210.1;Parent=gene-RM610_RS04340;Dbxref=GenBank:WP_019165210.1;Name=WP_019165210.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=RM610_RS04340;product=RNA polymerase sigma factor RpoD;protein_id=WP_019165210.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 900595 902379 . - . ID=gene-RM610_RS04345;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=RM610_RS04345;old_locus_tag=RM610_04360 NZ_JAVRJX010000001.1 Protein Homology CDS 900595 902379 . - 0 ID=cds-WP_107358828.1;Parent=gene-RM610_RS04345;Dbxref=GenBank:WP_107358828.1;Name=WP_107358828.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507486.1;locus_tag=RM610_RS04345;product=DNA primase;protein_id=WP_107358828.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 902451 903275 . - . ID=gene-RM610_RS04350;Name=RM610_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04350;old_locus_tag=RM610_04365 NZ_JAVRJX010000001.1 Protein Homology CDS 902451 903275 . - 0 ID=cds-WP_105965453.1;Parent=gene-RM610_RS04350;Dbxref=GenBank:WP_105965453.1;Name=WP_105965453.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=RM610_RS04350;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_105965453.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 903291 903914 . - . ID=gene-RM610_RS04355;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=RM610_RS04355;old_locus_tag=RM610_04370 NZ_JAVRJX010000001.1 Protein Homology CDS 903291 903914 . - 0 ID=cds-WP_103158618.1;Parent=gene-RM610_RS04355;Dbxref=GenBank:WP_103158618.1;Name=WP_103158618.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=RM610_RS04355;product=transcriptional regulator CcpN;protein_id=WP_103158618.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 904335 905726 . + . ID=gene-RM610_RS04360;Name=RM610_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04360;old_locus_tag=RM610_04375 NZ_JAVRJX010000001.1 Protein Homology CDS 904335 905726 . + 0 ID=cds-WP_107364378.1;Parent=gene-RM610_RS04360;Dbxref=GenBank:WP_107364378.1;Name=WP_107364378.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=RM610_RS04360;product=glycine--tRNA ligase;protein_id=WP_107364378.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 906183 906956 . - . ID=gene-RM610_RS04365;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=RM610_RS04365;old_locus_tag=RM610_04380 NZ_JAVRJX010000001.1 Protein Homology CDS 906183 906956 . - 0 ID=cds-WP_311541756.1;Parent=gene-RM610_RS04365;Dbxref=GenBank:WP_311541756.1;Name=WP_311541756.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=RM610_RS04365;product=DNA repair protein RecO;protein_id=WP_311541756.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 906979 907875 . - . ID=gene-RM610_RS04370;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=RM610_RS04370;old_locus_tag=RM610_04385 NZ_JAVRJX010000001.1 Protein Homology CDS 906979 907875 . - 0 ID=cds-WP_105965450.1;Parent=gene-RM610_RS04370;Dbxref=GenBank:WP_105965450.1;Name=WP_105965450.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=RM610_RS04370;product=GTPase Era;protein_id=WP_105965450.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 907877 908281 . - . ID=gene-RM610_RS04375;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=RM610_RS04375;old_locus_tag=RM610_04390 NZ_JAVRJX010000001.1 Protein Homology CDS 907877 908281 . - 0 ID=cds-WP_105985470.1;Parent=gene-RM610_RS04375;Dbxref=GenBank:WP_105985470.1;Name=WP_105985470.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500181.1;locus_tag=RM610_RS04375;product=cytidine deaminase;protein_id=WP_105985470.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 908296 908631 . - . ID=gene-RM610_RS04380;Name=RM610_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04380;old_locus_tag=RM610_04395 NZ_JAVRJX010000001.1 Protein Homology CDS 908296 908631 . - 0 ID=cds-WP_275113767.1;Parent=gene-RM610_RS04380;Dbxref=GenBank:WP_275113767.1;Name=WP_275113767.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507479.1;locus_tag=RM610_RS04380;product=diacylglycerol kinase family protein;protein_id=WP_275113767.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 908631 909095 . - . ID=gene-RM610_RS04385;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=RM610_RS04385;old_locus_tag=RM610_04400 NZ_JAVRJX010000001.1 Protein Homology CDS 908631 909095 . - 0 ID=cds-WP_311541757.1;Parent=gene-RM610_RS04385;Dbxref=GenBank:WP_311541757.1;Name=WP_311541757.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510508.1;locus_tag=RM610_RS04385;product=rRNA maturation RNase YbeY;protein_id=WP_311541757.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 909095 910042 . - . ID=gene-RM610_RS04390;Name=RM610_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04390;old_locus_tag=RM610_04405 NZ_JAVRJX010000001.1 Protein Homology CDS 909095 910042 . - 0 ID=cds-WP_037574043.1;Parent=gene-RM610_RS04390;Dbxref=GenBank:WP_037574043.1;Name=WP_037574043.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500184.1;locus_tag=RM610_RS04390;product=PhoH family protein;protein_id=WP_037574043.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 910389 911006 . - . ID=gene-RM610_RS04395;Name=RM610_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04395;old_locus_tag=RM610_04410 NZ_JAVRJX010000001.1 Protein Homology CDS 910389 911006 . - 0 ID=cds-WP_107359373.1;Parent=gene-RM610_RS04395;Dbxref=GenBank:WP_107359373.1;Name=WP_107359373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425209.1;locus_tag=RM610_RS04395;product=hypothetical protein;protein_id=WP_107359373.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 911019 912017 . - . ID=gene-RM610_RS04400;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=RM610_RS04400;old_locus_tag=RM610_04415 NZ_JAVRJX010000001.1 Protein Homology CDS 911019 912017 . - 0 ID=cds-WP_037574047.1;Parent=gene-RM610_RS04400;Dbxref=GenBank:WP_037574047.1;Name=WP_037574047.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425210.1;locus_tag=RM610_RS04400;product=flotillin-like protein FloA;protein_id=WP_037574047.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 912030 912719 . - . ID=gene-RM610_RS04405;Name=RM610_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04405;old_locus_tag=RM610_04420 NZ_JAVRJX010000001.1 Protein Homology CDS 912030 912719 . - 0 ID=cds-WP_311542019.1;Parent=gene-RM610_RS04405;Dbxref=GenBank:WP_311542019.1;Name=WP_311542019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481069.1;locus_tag=RM610_RS04405;product=NfeD family protein;protein_id=WP_311542019.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 912931 913107 . - . ID=gene-RM610_RS04410;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=RM610_RS04410;old_locus_tag=RM610_04425 NZ_JAVRJX010000001.1 Protein Homology CDS 912931 913107 . - 0 ID=cds-WP_002471046.1;Parent=gene-RM610_RS04410;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=RM610_RS04410;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 913238 914584 . - . ID=gene-RM610_RS04415;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=RM610_RS04415;old_locus_tag=RM610_04430 NZ_JAVRJX010000001.1 Protein Homology CDS 913238 914584 . - 0 ID=cds-WP_311541758.1;Parent=gene-RM610_RS04415;Dbxref=GenBank:WP_311541758.1;Name=WP_311541758.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=RM610_RS04415;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_311541758.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 914603 915352 . - . ID=gene-RM610_RS04420;Name=RM610_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04420;old_locus_tag=RM610_04435 NZ_JAVRJX010000001.1 Protein Homology CDS 914603 915352 . - 0 ID=cds-WP_107376149.1;Parent=gene-RM610_RS04420;Dbxref=GenBank:WP_107376149.1;Name=WP_107376149.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=RM610_RS04420;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_107376149.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 915358 916287 . - . ID=gene-RM610_RS04425;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=RM610_RS04425;old_locus_tag=RM610_04440 NZ_JAVRJX010000001.1 Protein Homology CDS 915358 916287 . - 0 ID=cds-WP_107376148.1;Parent=gene-RM610_RS04425;Dbxref=GenBank:WP_107376148.1;Name=WP_107376148.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831256.1;locus_tag=RM610_RS04425;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_107376148.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 916291 917421 . - . ID=gene-RM610_RS04430;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=RM610_RS04430;old_locus_tag=RM610_04445 NZ_JAVRJX010000001.1 Protein Homology CDS 916291 917421 . - 0 ID=cds-WP_107370095.1;Parent=gene-RM610_RS04430;Dbxref=GenBank:WP_107370095.1;Name=WP_107370095.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=RM610_RS04430;product=molecular chaperone DnaJ;protein_id=WP_107370095.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 917538 919370 . - . ID=gene-RM610_RS04435;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=RM610_RS04435;old_locus_tag=RM610_04450 NZ_JAVRJX010000001.1 Protein Homology CDS 917538 919370 . - 0 ID=cds-WP_107359377.1;Parent=gene-RM610_RS04435;Dbxref=GenBank:WP_107359377.1;Name=WP_107359377.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500193.1;locus_tag=RM610_RS04435;product=molecular chaperone DnaK;protein_id=WP_107359377.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 919434 920039 . - . ID=gene-RM610_RS04440;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=RM610_RS04440;old_locus_tag=RM610_04455 NZ_JAVRJX010000001.1 Protein Homology CDS 919434 920039 . - 0 ID=cds-WP_311541759.1;Parent=gene-RM610_RS04440;Dbxref=GenBank:WP_311541759.1;Name=WP_311541759.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182226.1;locus_tag=RM610_RS04440;product=nucleotide exchange factor GrpE;protein_id=WP_311541759.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 920078 921061 . - . ID=gene-RM610_RS04445;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=RM610_RS04445;old_locus_tag=RM610_04460 NZ_JAVRJX010000001.1 Protein Homology CDS 920078 921061 . - 0 ID=cds-WP_107359379.1;Parent=gene-RM610_RS04445;Dbxref=GenBank:WP_107359379.1;Name=WP_107359379.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275631.1;locus_tag=RM610_RS04445;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_107359379.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 921161 922282 . - . ID=gene-RM610_RS04450;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=RM610_RS04450;old_locus_tag=RM610_04465 NZ_JAVRJX010000001.1 Protein Homology CDS 921161 922282 . - 0 ID=cds-WP_107359380.1;Parent=gene-RM610_RS04450;Dbxref=GenBank:WP_107359380.1;Name=WP_107359380.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=RM610_RS04450;product=radical SAM family heme chaperone HemW;protein_id=WP_107359380.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 922344 924167 . - . ID=gene-RM610_RS04455;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=RM610_RS04455;old_locus_tag=RM610_04470 NZ_JAVRJX010000001.1 Protein Homology CDS 922344 924167 . - 0 ID=cds-WP_107364381.1;Parent=gene-RM610_RS04455;Dbxref=GenBank:WP_107364381.1;Name=WP_107364381.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=RM610_RS04455;product=translation elongation factor 4;protein_id=WP_107364381.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 924409 924657 . + . ID=gene-RM610_RS04460;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=RM610_RS04460;old_locus_tag=RM610_04475 NZ_JAVRJX010000001.1 Protein Homology CDS 924409 924657 . + 0 ID=cds-WP_311541760.1;Parent=gene-RM610_RS04460;Dbxref=GenBank:WP_311541760.1;Name=WP_311541760.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=RM610_RS04460;product=30S ribosomal protein S20;protein_id=WP_311541760.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 924685 925662 . - . ID=gene-RM610_RS04465;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=RM610_RS04465;old_locus_tag=RM610_04480 NZ_JAVRJX010000001.1 Protein Homology CDS 924685 925662 . - 0 ID=cds-WP_107375835.1;Parent=gene-RM610_RS04465;Dbxref=GenBank:WP_107375835.1;Name=WP_107375835.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836898.1;locus_tag=RM610_RS04465;product=DNA polymerase III subunit delta;protein_id=WP_107375835.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 925759 927852 . - . ID=gene-RM610_RS04470;Name=RM610_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04470;old_locus_tag=RM610_04485 NZ_JAVRJX010000001.1 Protein Homology CDS 925759 927852 . - 0 ID=cds-WP_311541761.1;Parent=gene-RM610_RS04470;Dbxref=GenBank:WP_311541761.1;Name=WP_311541761.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=RM610_RS04470;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_311541761.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 927985 928446 . - . ID=gene-RM610_RS04475;Name=RM610_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04475;old_locus_tag=RM610_04490 NZ_JAVRJX010000001.1 Protein Homology CDS 927985 928446 . - 0 ID=cds-WP_037574083.1;Parent=gene-RM610_RS04475;Dbxref=GenBank:WP_037574083.1;Name=WP_037574083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458970.1;locus_tag=RM610_RS04475;product=ComE operon protein 2;protein_id=WP_037574083.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 928530 929168 . - . ID=gene-RM610_RS04480;Name=RM610_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04480;old_locus_tag=RM610_04495 NZ_JAVRJX010000001.1 Protein Homology CDS 928530 929168 . - 0 ID=cds-WP_107369783.1;Parent=gene-RM610_RS04480;Dbxref=GenBank:WP_107369783.1;Name=WP_107369783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382608.1;locus_tag=RM610_RS04480;product=helix-hairpin-helix domain-containing protein;protein_id=WP_107369783.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 929217 929939 . - . ID=gene-RM610_RS04485;Name=RM610_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04485;old_locus_tag=RM610_04500 NZ_JAVRJX010000001.1 Protein Homology CDS 929217 929939 . - 0 ID=cds-WP_182472283.1;Parent=gene-RM610_RS04485;Dbxref=GenBank:WP_182472283.1;Name=WP_182472283.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=RM610_RS04485;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_182472283.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 929939 930295 . - . ID=gene-RM610_RS04490;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=RM610_RS04490;old_locus_tag=RM610_04505 NZ_JAVRJX010000001.1 Protein Homology CDS 929939 930295 . - 0 ID=cds-WP_103158624.1;Parent=gene-RM610_RS04490;Dbxref=GenBank:WP_103158624.1;Name=WP_103158624.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=RM610_RS04490;product=ribosome silencing factor;protein_id=WP_103158624.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 930308 930880 . - . ID=gene-RM610_RS04495;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=RM610_RS04495;old_locus_tag=RM610_04510 NZ_JAVRJX010000001.1 Protein Homology CDS 930308 930880 . - 0 ID=cds-WP_107375839.1;Parent=gene-RM610_RS04495;Dbxref=GenBank:WP_107375839.1;Name=WP_107375839.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369462.1;locus_tag=RM610_RS04495;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_107375839.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 930873 931439 . - . ID=gene-RM610_RS04500;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=RM610_RS04500;old_locus_tag=RM610_04515 NZ_JAVRJX010000001.1 Protein Homology CDS 930873 931439 . - 0 ID=cds-WP_311541762.1;Parent=gene-RM610_RS04500;Dbxref=GenBank:WP_311541762.1;Name=WP_311541762.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=RM610_RS04500;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_311541762.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 931439 931735 . - . ID=gene-RM610_RS04505;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=RM610_RS04505;old_locus_tag=RM610_04520 NZ_JAVRJX010000001.1 Protein Homology CDS 931439 931735 . - 0 ID=cds-WP_037574099.1;Parent=gene-RM610_RS04505;Dbxref=GenBank:WP_037574099.1;Name=WP_037574099.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440113.1;locus_tag=RM610_RS04505;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_037574099.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 931745 932557 . - . ID=gene-RM610_RS04510;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=RM610_RS04510;old_locus_tag=RM610_04525 NZ_JAVRJX010000001.1 Protein Homology CDS 931745 932557 . - 0 ID=cds-WP_107359390.1;Parent=gene-RM610_RS04510;Dbxref=GenBank:WP_107359390.1;Name=WP_107359390.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900465.1;locus_tag=RM610_RS04510;product=shikimate dehydrogenase;protein_id=WP_107359390.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 932571 933671 . - . ID=gene-RM610_RS04515;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=RM610_RS04515;old_locus_tag=RM610_04530 NZ_JAVRJX010000001.1 Protein Homology CDS 932571 933671 . - 0 ID=cds-WP_107369786.1;Parent=gene-RM610_RS04515;Dbxref=GenBank:WP_107369786.1;Name=WP_107369786.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500210.1;locus_tag=RM610_RS04515;product=ribosome biogenesis GTPase YqeH;protein_id=WP_107369786.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 933668 934198 . - . ID=gene-RM610_RS04520;Name=RM610_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04520;old_locus_tag=RM610_04535 NZ_JAVRJX010000001.1 Protein Homology CDS 933668 934198 . - 0 ID=cds-WP_037574108.1;Parent=gene-RM610_RS04520;Dbxref=GenBank:WP_037574108.1;Name=WP_037574108.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=RM610_RS04520;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_037574108.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 934265 934957 . - . ID=gene-RM610_RS04525;Name=RM610_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04525;old_locus_tag=RM610_04540 NZ_JAVRJX010000001.1 Protein Homology CDS 934265 934957 . - 0 ID=cds-WP_107359392.1;Parent=gene-RM610_RS04525;Dbxref=GenBank:WP_107359392.1;Name=WP_107359392.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471057.1;locus_tag=RM610_RS04525;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_107359392.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 935242 936480 . - . ID=gene-RM610_RS04530;Name=RM610_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04530;old_locus_tag=RM610_04545 NZ_JAVRJX010000001.1 Protein Homology CDS 935242 936480 . - 0 ID=cds-WP_107375841.1;Parent=gene-RM610_RS04530;Dbxref=GenBank:WP_107375841.1;Name=WP_107375841.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165175.1;locus_tag=RM610_RS04530;product=NRAMP family divalent metal transporter;protein_id=WP_107375841.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 936484 937245 . - . ID=gene-RM610_RS04535;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=RM610_RS04535;old_locus_tag=RM610_04550 NZ_JAVRJX010000001.1 Protein Homology CDS 936484 937245 . - 0 ID=cds-WP_107359393.1;Parent=gene-RM610_RS04535;Dbxref=GenBank:WP_107359393.1;Name=WP_107359393.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382620.1;locus_tag=RM610_RS04535;product=5-oxoprolinase subunit PxpA;protein_id=WP_107359393.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 937238 938602 . - . ID=gene-RM610_RS04540;Name=RM610_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04540;old_locus_tag=RM610_04555 NZ_JAVRJX010000001.1 Protein Homology CDS 937238 938602 . - 0 ID=cds-WP_311541763.1;Parent=gene-RM610_RS04540;Dbxref=GenBank:WP_311541763.1;Name=WP_311541763.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=RM610_RS04540;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_311541763.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 938614 939060 . - . ID=gene-RM610_RS04545;Name=RM610_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04545;old_locus_tag=RM610_04560 NZ_JAVRJX010000001.1 Protein Homology CDS 938614 939060 . - 0 ID=cds-WP_107375844.1;Parent=gene-RM610_RS04545;Dbxref=GenBank:WP_107375844.1;Name=WP_107375844.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613754.1;locus_tag=RM610_RS04545;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_107375844.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 939051 940076 . - . ID=gene-RM610_RS04550;Name=RM610_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04550;old_locus_tag=RM610_04565 NZ_JAVRJX010000001.1 Protein Homology CDS 939051 940076 . - 0 ID=cds-WP_311541764.1;Parent=gene-RM610_RS04550;Dbxref=GenBank:WP_311541764.1;Name=WP_311541764.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=RM610_RS04550;product=5-oxoprolinase subunit C family protein;protein_id=WP_311541764.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 940066 940797 . - . ID=gene-RM610_RS04555;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=RM610_RS04555;old_locus_tag=RM610_04570 NZ_JAVRJX010000001.1 Protein Homology CDS 940066 940797 . - 0 ID=cds-WP_105985443.1;Parent=gene-RM610_RS04555;Dbxref=GenBank:WP_105985443.1;Name=WP_105985443.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=RM610_RS04555;product=5-oxoprolinase subunit PxpB;protein_id=WP_105985443.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 941034 941510 . - . ID=gene-RM610_RS04560;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=RM610_RS04560;old_locus_tag=RM610_04575 NZ_JAVRJX010000001.1 Protein Homology CDS 941034 941510 . - 0 ID=cds-WP_105965429.1;Parent=gene-RM610_RS04560;Dbxref=GenBank:WP_105965429.1;Name=WP_105965429.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=RM610_RS04560;product=transcription elongation factor GreA;protein_id=WP_105965429.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 941537 942163 . - . ID=gene-RM610_RS04565;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=RM610_RS04565;old_locus_tag=RM610_04580 NZ_JAVRJX010000001.1 Protein Homology CDS 941537 942163 . - 0 ID=cds-WP_037574136.1;Parent=gene-RM610_RS04565;Dbxref=GenBank:WP_037574136.1;Name=WP_037574136.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458952.1;locus_tag=RM610_RS04565;product=uridine kinase;protein_id=WP_037574136.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 942167 943432 . - . ID=gene-RM610_RS04570;Name=RM610_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04570;old_locus_tag=RM610_04585 NZ_JAVRJX010000001.1 Protein Homology CDS 942167 943432 . - 0 ID=cds-WP_107369791.1;Parent=gene-RM610_RS04570;Dbxref=GenBank:WP_107369791.1;Name=WP_107369791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471048.1;locus_tag=RM610_RS04570;product=peptidase U32 family protein;protein_id=WP_107369791.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 943470 944399 . - . ID=gene-RM610_RS04575;Name=RM610_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04575;old_locus_tag=RM610_04590 NZ_JAVRJX010000001.1 Protein Homology CDS 943470 944399 . - 0 ID=cds-WP_311541765.1;Parent=gene-RM610_RS04575;Dbxref=GenBank:WP_311541765.1;Name=WP_311541765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=RM610_RS04575;product=peptidase U32 family protein;protein_id=WP_311541765.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 944392 945036 . - . ID=gene-RM610_RS04580;Name=RM610_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04580;old_locus_tag=RM610_04595 NZ_JAVRJX010000001.1 Protein Homology CDS 944392 945036 . - 0 ID=cds-WP_107359397.1;Parent=gene-RM610_RS04580;Dbxref=GenBank:WP_107359397.1;Name=WP_107359397.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=RM610_RS04580;product=O-methyltransferase;protein_id=WP_107359397.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 945416 945730 . - . ID=gene-RM610_RS04585;Name=RM610_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04585;old_locus_tag=RM610_04600 NZ_JAVRJX010000001.1 Protein Homology CDS 945416 945730 . - 0 ID=cds-WP_105985439.1;Parent=gene-RM610_RS04585;Dbxref=GenBank:WP_105985439.1;Name=WP_105985439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=RM610_RS04585;product=DUF1292 domain-containing protein;protein_id=WP_105985439.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 945745 946173 . - . ID=gene-RM610_RS04590;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=RM610_RS04590;old_locus_tag=RM610_04605 NZ_JAVRJX010000001.1 Protein Homology CDS 945745 946173 . - 0 ID=cds-WP_037574153.1;Parent=gene-RM610_RS04590;Dbxref=GenBank:WP_037574153.1;Name=WP_037574153.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=RM610_RS04590;product=Holliday junction resolvase RuvX;protein_id=WP_037574153.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 946166 946438 . - . ID=gene-RM610_RS04595;Name=RM610_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04595;old_locus_tag=RM610_04610 NZ_JAVRJX010000001.1 Protein Homology CDS 946166 946438 . - 0 ID=cds-WP_037574156.1;Parent=gene-RM610_RS04595;Dbxref=GenBank:WP_037574156.1;Name=WP_037574156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=RM610_RS04595;product=IreB family regulatory phosphoprotein;protein_id=WP_037574156.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 946500 949130 . - . ID=gene-RM610_RS04600;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=RM610_RS04600;old_locus_tag=RM610_04615 NZ_JAVRJX010000001.1 Protein Homology CDS 946500 949130 . - 0 ID=cds-WP_311541766.1;Parent=gene-RM610_RS04600;Dbxref=GenBank:WP_311541766.1;Name=WP_311541766.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501156.1;locus_tag=RM610_RS04600;product=alanine--tRNA ligase;protein_id=WP_311541766.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 949356 951737 . - . ID=gene-RM610_RS04605;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=RM610_RS04605;old_locus_tag=RM610_04620 NZ_JAVRJX010000001.1 Protein Homology CDS 949356 951737 . - 0 ID=cds-WP_311541767.1;Parent=gene-RM610_RS04605;Dbxref=GenBank:WP_311541767.1;Name=WP_311541767.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425251.1;locus_tag=RM610_RS04605;product=SF1B family DNA helicase RecD2;protein_id=WP_311541767.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 951740 952414 . - . ID=gene-RM610_RS04610;Name=RM610_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04610;old_locus_tag=RM610_04625 NZ_JAVRJX010000001.1 Protein Homology CDS 951740 952414 . - 0 ID=cds-WP_107381559.1;Parent=gene-RM610_RS04610;Dbxref=GenBank:WP_107381559.1;Name=WP_107381559.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=RM610_RS04610;product=tetratricopeptide repeat protein;protein_id=WP_107381559.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 952437 953549 . - . ID=gene-RM610_RS04615;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=RM610_RS04615;old_locus_tag=RM610_04630 NZ_JAVRJX010000001.1 Protein Homology CDS 952437 953549 . - 0 ID=cds-WP_107381560.1;Parent=gene-RM610_RS04615;Dbxref=GenBank:WP_107381560.1;Name=WP_107381560.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=RM610_RS04615;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_107381560.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 953546 954694 . - . ID=gene-RM610_RS04620;Name=RM610_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04620;old_locus_tag=RM610_04635 NZ_JAVRJX010000001.1 Protein Homology CDS 953546 954694 . - 0 ID=cds-WP_107369796.1;Parent=gene-RM610_RS04620;Dbxref=GenBank:WP_107369796.1;Name=WP_107369796.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471009.1;locus_tag=RM610_RS04620;product=cysteine desulfurase family protein;protein_id=WP_107369796.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 954914 955927 . + . ID=gene-RM610_RS04625;Name=RM610_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04625;old_locus_tag=RM610_04640 NZ_JAVRJX010000001.1 Protein Homology CDS 954914 955927 . + 0 ID=cds-WP_311541768.1;Parent=gene-RM610_RS04625;Dbxref=GenBank:WP_311541768.1;Name=WP_311541768.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425255.1;locus_tag=RM610_RS04625;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_311541768.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 955972 956127 . - . ID=gene-RM610_RS04630;Name=RM610_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04630;old_locus_tag=RM610_04645 NZ_JAVRJX010000001.1 Protein Homology CDS 955972 956127 . - 0 ID=cds-WP_165806095.1;Parent=gene-RM610_RS04630;Dbxref=GenBank:WP_165806095.1;Name=WP_165806095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165159.1;locus_tag=RM610_RS04630;product=hypothetical protein;protein_id=WP_165806095.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 956221 957051 . - . ID=gene-RM610_RS04635;Name=RM610_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04635;old_locus_tag=RM610_04650 NZ_JAVRJX010000001.1 Protein Homology CDS 956221 957051 . - 0 ID=cds-WP_311541769.1;Parent=gene-RM610_RS04635;Dbxref=GenBank:WP_311541769.1;Name=WP_311541769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=RM610_RS04635;product=aldo/keto reductase;protein_id=WP_311541769.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 957122 957541 . - . ID=gene-RM610_RS04640;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=RM610_RS04640;old_locus_tag=RM610_04655 NZ_JAVRJX010000001.1 Protein Homology CDS 957122 957541 . - 0 ID=cds-WP_037574180.1;Parent=gene-RM610_RS04640;Dbxref=GenBank:WP_037574180.1;Name=WP_037574180.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=RM610_RS04640;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_037574180.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 957685 958944 . + . ID=gene-RM610_RS04645;Name=RM610_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04645;old_locus_tag=RM610_04660 NZ_JAVRJX010000001.1 Protein Homology CDS 957685 958944 . + 0 ID=cds-WP_107369799.1;Parent=gene-RM610_RS04645;Dbxref=GenBank:WP_107369799.1;Name=WP_107369799.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453388.1;locus_tag=RM610_RS04645;product=replication-associated recombination protein A;protein_id=WP_107369799.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 958993 959760 . - . ID=gene-RM610_RS04650;Name=RM610_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04650;old_locus_tag=RM610_04665 NZ_JAVRJX010000001.1 Protein Homology CDS 958993 959760 . - 0 ID=cds-WP_311541770.1;Parent=gene-RM610_RS04650;Dbxref=GenBank:WP_311541770.1;Name=WP_311541770.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=RM610_RS04650;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_311541770.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 959824 960015 . - . ID=gene-RM610_RS04655;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=RM610_RS04655;old_locus_tag=RM610_04670 NZ_JAVRJX010000001.1 cmsearch ncRNA 959824 960015 . - . ID=rna-RM610_RS04655;Parent=gene-RM610_RS04655;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS04655;product=6S RNA NZ_JAVRJX010000001.1 cmsearch exon 959824 960015 . - . ID=exon-RM610_RS04655-1;Parent=rna-RM610_RS04655;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS04655;product=6S RNA NZ_JAVRJX010000001.1 RefSeq gene 960068 961834 . - . ID=gene-RM610_RS04660;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=RM610_RS04660;old_locus_tag=RM610_04675 NZ_JAVRJX010000001.1 Protein Homology CDS 960068 961834 . - 0 ID=cds-WP_107519326.1;Parent=gene-RM610_RS04660;Dbxref=GenBank:WP_107519326.1;Name=WP_107519326.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=RM610_RS04660;product=aspartate--tRNA ligase;protein_id=WP_107519326.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 961834 963105 . - . ID=gene-RM610_RS04665;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=RM610_RS04665;old_locus_tag=RM610_04680 NZ_JAVRJX010000001.1 Protein Homology CDS 961834 963105 . - 0 ID=cds-WP_194745851.1;Parent=gene-RM610_RS04665;Dbxref=GenBank:WP_194745851.1;Name=WP_194745851.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=RM610_RS04665;product=histidine--tRNA ligase;protein_id=WP_194745851.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 963436 964311 . - . ID=gene-RM610_RS04670;Name=RM610_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04670;old_locus_tag=RM610_04685 NZ_JAVRJX010000001.1 Protein Homology CDS 963436 964311 . - 0 ID=cds-WP_107375855.1;Parent=gene-RM610_RS04670;Dbxref=GenBank:WP_107375855.1;Name=WP_107375855.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=RM610_RS04670;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_107375855.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 964308 964760 . - . ID=gene-RM610_RS04675;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=RM610_RS04675;old_locus_tag=RM610_04690 NZ_JAVRJX010000001.1 Protein Homology CDS 964308 964760 . - 0 ID=cds-WP_107375856.1;Parent=gene-RM610_RS04675;Dbxref=GenBank:WP_107375856.1;Name=WP_107375856.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302954.1;locus_tag=RM610_RS04675;product=D-aminoacyl-tRNA deacylase;protein_id=WP_107375856.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 964772 966961 . - . ID=gene-RM610_RS04680;Name=RM610_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04680;old_locus_tag=RM610_04695 NZ_JAVRJX010000001.1 Protein Homology CDS 964772 966961 . - 0 ID=cds-WP_107369804.1;Parent=gene-RM610_RS04680;Dbxref=GenBank:WP_107369804.1;Name=WP_107369804.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=RM610_RS04680;product=RelA/SpoT family protein;protein_id=WP_107369804.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 967139 967657 . - . ID=gene-RM610_RS04685;Name=RM610_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04685;old_locus_tag=RM610_04700 NZ_JAVRJX010000001.1 Protein Homology CDS 967139 967657 . - 0 ID=cds-WP_037574204.1;Parent=gene-RM610_RS04685;Dbxref=GenBank:WP_037574204.1;Name=WP_037574204.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=RM610_RS04685;product=adenine phosphoribosyltransferase;protein_id=WP_037574204.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 967669 969951 . - . ID=gene-RM610_RS04690;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=RM610_RS04690;old_locus_tag=RM610_04705 NZ_JAVRJX010000001.1 Protein Homology CDS 967669 969951 . - 0 ID=cds-WP_311541771.1;Parent=gene-RM610_RS04690;Dbxref=GenBank:WP_311541771.1;Name=WP_311541771.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451805.1;locus_tag=RM610_RS04690;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_311541771.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 970625 972904 . - . ID=gene-RM610_RS04695;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=RM610_RS04695;old_locus_tag=RM610_04710 NZ_JAVRJX010000001.1 Protein Homology CDS 970625 972904 . - 0 ID=cds-WP_311541772.1;Parent=gene-RM610_RS04695;Dbxref=GenBank:WP_311541772.1;Name=WP_311541772.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804882.1;locus_tag=RM610_RS04695;product=protein translocase subunit SecDF;protein_id=WP_311541772.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 973272 973535 . - . ID=gene-RM610_RS04700;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=RM610_RS04700;old_locus_tag=RM610_04715 NZ_JAVRJX010000001.1 Protein Homology CDS 973272 973535 . - 0 ID=cds-WP_037574211.1;Parent=gene-RM610_RS04700;Dbxref=GenBank:WP_037574211.1;Name=WP_037574211.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=RM610_RS04700;product=preprotein translocase subunit YajC;protein_id=WP_037574211.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 973551 974690 . - . ID=gene-RM610_RS04705;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=RM610_RS04705;old_locus_tag=RM610_04720 NZ_JAVRJX010000001.1 Protein Homology CDS 973551 974690 . - 0 ID=cds-WP_105985421.1;Parent=gene-RM610_RS04705;Dbxref=GenBank:WP_105985421.1;Name=WP_105985421.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=RM610_RS04705;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_105985421.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 974709 975734 . - . ID=gene-RM610_RS04710;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=RM610_RS04710;old_locus_tag=RM610_04725 NZ_JAVRJX010000001.1 Protein Homology CDS 974709 975734 . - 0 ID=cds-WP_107381553.1;Parent=gene-RM610_RS04710;Dbxref=GenBank:WP_107381553.1;Name=WP_107381553.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=RM610_RS04710;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_107381553.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 975752 976747 . - . ID=gene-RM610_RS04715;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=RM610_RS04715;old_locus_tag=RM610_04730 NZ_JAVRJX010000001.1 Protein Homology CDS 975752 976747 . - 0 ID=cds-WP_037574221.1;Parent=gene-RM610_RS04715;Dbxref=GenBank:WP_037574221.1;Name=WP_037574221.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=RM610_RS04715;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_037574221.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 976761 977363 . - . ID=gene-RM610_RS04720;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=RM610_RS04720;old_locus_tag=RM610_04735 NZ_JAVRJX010000001.1 Protein Homology CDS 976761 977363 . - 0 ID=cds-WP_107359049.1;Parent=gene-RM610_RS04720;Dbxref=GenBank:WP_107359049.1;Name=WP_107359049.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271546.1;locus_tag=RM610_RS04720;product=Holliday junction branch migration protein RuvA;protein_id=WP_107359049.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 977376 977819 . - . ID=gene-RM610_RS04725;Name=RM610_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04725;old_locus_tag=RM610_04740 NZ_JAVRJX010000001.1 Protein Homology CDS 977376 977819 . - 0 ID=cds-WP_107359048.1;Parent=gene-RM610_RS04725;Dbxref=GenBank:WP_107359048.1;Name=WP_107359048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=RM610_RS04725;product=ACT domain-containing protein;protein_id=WP_107359048.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 977835 979124 . - . ID=gene-RM610_RS04730;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=RM610_RS04730;old_locus_tag=RM610_04745 NZ_JAVRJX010000001.1 Protein Homology CDS 977835 979124 . - 0 ID=cds-WP_107381555.1;Parent=gene-RM610_RS04730;Dbxref=GenBank:WP_107381555.1;Name=WP_107381555.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=RM610_RS04730;product=GTPase ObgE;protein_id=WP_107381555.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 979355 979639 . - . ID=gene-RM610_RS04735;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=RM610_RS04735;old_locus_tag=RM610_04750 NZ_JAVRJX010000001.1 Protein Homology CDS 979355 979639 . - 0 ID=cds-WP_037574233.1;Parent=gene-RM610_RS04735;Dbxref=GenBank:WP_037574233.1;Name=WP_037574233.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=RM610_RS04735;product=50S ribosomal protein L27;protein_id=WP_037574233.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 979650 979970 . - . ID=gene-RM610_RS04740;Name=RM610_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04740;old_locus_tag=RM610_04755 NZ_JAVRJX010000001.1 Protein Homology CDS 979650 979970 . - 0 ID=cds-WP_037574236.1;Parent=gene-RM610_RS04740;Dbxref=GenBank:WP_037574236.1;Name=WP_037574236.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=RM610_RS04740;product=ribosomal-processing cysteine protease Prp;protein_id=WP_037574236.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 979973 980281 . - . ID=gene-RM610_RS04745;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=RM610_RS04745;old_locus_tag=RM610_04760 NZ_JAVRJX010000001.1 Protein Homology CDS 979973 980281 . - 0 ID=cds-WP_107359046.1;Parent=gene-RM610_RS04745;Dbxref=GenBank:WP_107359046.1;Name=WP_107359046.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364931.1;locus_tag=RM610_RS04745;product=50S ribosomal protein L21;protein_id=WP_107359046.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch sequence_feature 980293 980365 . - . ID=id-NZ_JAVRJX010000001.1:980293..980365;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00559,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000001.1 RefSeq gene 980394 980918 . - . ID=gene-RM610_RS04750;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=RM610_RS04750;old_locus_tag=RM610_04765 NZ_JAVRJX010000001.1 Protein Homology CDS 980394 980918 . - 0 ID=cds-WP_311541774.1;Parent=gene-RM610_RS04750;Dbxref=GenBank:WP_311541774.1;Name=WP_311541774.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:NF016019.7;locus_tag=RM610_RS04750;product=rod shape-determining protein MreD;protein_id=WP_311541774.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 980915 981751 . - . ID=gene-RM610_RS04755;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=RM610_RS04755;old_locus_tag=RM610_04770 NZ_JAVRJX010000001.1 Protein Homology CDS 980915 981751 . - 0 ID=cds-WP_107375518.1;Parent=gene-RM610_RS04755;Dbxref=GenBank:WP_107375518.1;Name=WP_107375518.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=RM610_RS04755;product=rod shape-determining protein MreC;protein_id=WP_107375518.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 982293 982430 . - . ID=gene-RM610_RS04760;Name=RM610_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04760;old_locus_tag=RM610_04775 NZ_JAVRJX010000001.1 Protein Homology CDS 982293 982430 . - 0 ID=cds-WP_165806092.1;Parent=gene-RM610_RS04760;Dbxref=GenBank:WP_165806092.1;Name=WP_165806092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471526.1;locus_tag=RM610_RS04760;product=hypothetical protein;protein_id=WP_165806092.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 982504 982962 . - . ID=gene-RM610_RS04765;Name=RM610_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04765;old_locus_tag=RM610_04780 NZ_JAVRJX010000001.1 Protein Homology CDS 982504 982962 . - 0 ID=cds-WP_107359043.1;Parent=gene-RM610_RS04765;Dbxref=GenBank:WP_107359043.1;Name=WP_107359043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=RM610_RS04765;product=DUF4930 family protein;protein_id=WP_107359043.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 983303 983989 . - . ID=gene-RM610_RS04770;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=RM610_RS04770;old_locus_tag=RM610_04785 NZ_JAVRJX010000001.1 Protein Homology CDS 983303 983989 . - 0 ID=cds-WP_107375520.1;Parent=gene-RM610_RS04770;Dbxref=GenBank:WP_107375520.1;Name=WP_107375520.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=RM610_RS04770;product=RadC family protein;protein_id=WP_107375520.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 983989 984699 . - . ID=gene-RM610_RS12050;Name=RM610_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12050;old_locus_tag=RM610_04790 NZ_JAVRJX010000001.1 Protein Homology CDS 983989 984699 . - 0 ID=cds-WP_375712507.1;Parent=gene-RM610_RS12050;Dbxref=GenBank:WP_375712507.1;Name=WP_375712507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=RM610_RS12050;product=prepilin peptidase;protein_id=WP_375712507.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 984868 986130 . - . ID=gene-RM610_RS04775;Name=RM610_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04775;old_locus_tag=RM610_04795 NZ_JAVRJX010000001.1 Protein Homology CDS 984868 986130 . - 0 ID=cds-WP_107375522.1;Parent=gene-RM610_RS04775;Dbxref=GenBank:WP_107375522.1;Name=WP_107375522.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510278.1;locus_tag=RM610_RS04775;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_107375522.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 986142 988772 . - . ID=gene-RM610_RS04780;Name=RM610_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04780;old_locus_tag=RM610_04800 NZ_JAVRJX010000001.1 Protein Homology CDS 986142 988772 . - 0 ID=cds-WP_107375523.1;Parent=gene-RM610_RS04780;Dbxref=GenBank:WP_107375523.1;Name=WP_107375523.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=RM610_RS04780;product=valine--tRNA ligase;protein_id=WP_107375523.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch binding_site 988814 989023 . - . ID=id-NZ_JAVRJX010000001.1:988814..989023;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000001.1 RefSeq gene 989080 989628 . + . ID=gene-RM610_RS04785;Name=RM610_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04785;old_locus_tag=RM610_04805 NZ_JAVRJX010000001.1 Protein Homology CDS 989080 989628 . + 0 ID=cds-WP_107375524.1;Parent=gene-RM610_RS04785;Dbxref=GenBank:WP_107375524.1;Name=WP_107375524.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=RM610_RS04785;product=DNA-3-methyladenine glycosylase I;protein_id=WP_107375524.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 989662 990744 . - . ID=gene-RM610_RS04790;Name=RM610_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04790;old_locus_tag=RM610_04810 NZ_JAVRJX010000001.1 Protein Homology CDS 989662 990744 . - 0 ID=cds-WP_311541775.1;Parent=gene-RM610_RS04790;Dbxref=GenBank:WP_311541775.1;Name=WP_311541775.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443295.1;locus_tag=RM610_RS04790;product=AbrB family protein;protein_id=WP_311541775.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 990907 992190 . - . ID=gene-RM610_RS04795;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=RM610_RS04795;old_locus_tag=RM610_04815 NZ_JAVRJX010000001.1 Protein Homology CDS 990907 992190 . - 0 ID=cds-WP_037574268.1;Parent=gene-RM610_RS04795;Dbxref=GenBank:WP_037574268.1;Name=WP_037574268.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458906.1;locus_tag=RM610_RS04795;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_037574268.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 992203 993180 . - . ID=gene-RM610_RS04800;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=RM610_RS04800;old_locus_tag=RM610_04820 NZ_JAVRJX010000001.1 Protein Homology CDS 992203 993180 . - 0 ID=cds-WP_107359052.1;Parent=gene-RM610_RS04800;Dbxref=GenBank:WP_107359052.1;Name=WP_107359052.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=RM610_RS04800;product=porphobilinogen synthase;protein_id=WP_107359052.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 993170 993859 . - . ID=gene-RM610_RS04805;Name=RM610_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04805;old_locus_tag=RM610_04825 NZ_JAVRJX010000001.1 Protein Homology CDS 993170 993859 . - 0 ID=cds-WP_107381506.1;Parent=gene-RM610_RS04805;Dbxref=GenBank:WP_107381506.1;Name=WP_107381506.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,obsolete protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805954.1;locus_tag=RM610_RS04805;product=uroporphyrinogen-III synthase;protein_id=WP_107381506.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 993870 994796 . - . ID=gene-RM610_RS04810;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=RM610_RS04810;old_locus_tag=RM610_04830 NZ_JAVRJX010000001.1 Protein Homology CDS 993870 994796 . - 0 ID=cds-WP_107359035.1;Parent=gene-RM610_RS04810;Dbxref=GenBank:WP_107359035.1;Name=WP_107359035.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500279.1;locus_tag=RM610_RS04810;product=hydroxymethylbilane synthase;protein_id=WP_107359035.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 994818 995654 . - . ID=gene-RM610_RS04815;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=RM610_RS04815;old_locus_tag=RM610_04835 NZ_JAVRJX010000001.1 Protein Homology CDS 994818 995654 . - 0 ID=cds-WP_107359034.1;Parent=gene-RM610_RS04815;Dbxref=GenBank:WP_107359034.1;Name=WP_107359034.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729282.1;locus_tag=RM610_RS04815;product=cytochrome c biogenesis protein CcsA;protein_id=WP_107359034.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 995669 997009 . - . ID=gene-RM610_RS04820;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=RM610_RS04820;old_locus_tag=RM610_04840 NZ_JAVRJX010000001.1 Protein Homology CDS 995669 997009 . - 0 ID=cds-WP_311541777.1;Parent=gene-RM610_RS04820;Dbxref=GenBank:WP_311541777.1;Name=WP_311541777.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase (NADP+) activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381867.1;locus_tag=RM610_RS04820;product=glutamyl-tRNA reductase;protein_id=WP_311541777.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 997125 997718 . - . ID=gene-RM610_RS04825;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=RM610_RS04825;old_locus_tag=RM610_04845 NZ_JAVRJX010000001.1 Protein Homology CDS 997125 997718 . - 0 ID=cds-WP_311541778.1;Parent=gene-RM610_RS04825;Dbxref=GenBank:WP_311541778.1;Name=WP_311541778.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425297.1;locus_tag=RM610_RS04825;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_311541778.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 997790 999052 . - . ID=gene-RM610_RS04830;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=RM610_RS04830;old_locus_tag=RM610_04850 NZ_JAVRJX010000001.1 Protein Homology CDS 997790 999052 . - 0 ID=cds-WP_105985401.1;Parent=gene-RM610_RS04830;Dbxref=GenBank:WP_105985401.1;Name=WP_105985401.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=RM610_RS04830;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_105985401.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 999248 1000561 . - . ID=gene-RM610_RS04835;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=RM610_RS04835;old_locus_tag=RM610_04855 NZ_JAVRJX010000001.1 Protein Homology CDS 999248 1000561 . - 0 ID=cds-WP_107369830.1;Parent=gene-RM610_RS04835;Dbxref=GenBank:WP_107369830.1;Name=WP_107369830.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=RM610_RS04835;product=trigger factor;protein_id=WP_107369830.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1000646 1001569 . - . ID=gene-RM610_RS04840;Name=RM610_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04840;old_locus_tag=RM610_04860 NZ_JAVRJX010000001.1 Protein Homology CDS 1000646 1001569 . - 0 ID=cds-WP_311541780.1;Parent=gene-RM610_RS04840;Dbxref=GenBank:WP_311541780.1;Name=WP_311541780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425300.1;locus_tag=RM610_RS04840;product=hypothetical protein;protein_id=WP_311541780.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1001579 1002190 . - . ID=gene-RM610_RS04845;Name=RM610_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04845;old_locus_tag=RM610_04865 NZ_JAVRJX010000001.1 Protein Homology CDS 1001579 1002190 . - 0 ID=cds-WP_311541781.1;Parent=gene-RM610_RS04845;Dbxref=GenBank:WP_311541781.1;Name=WP_311541781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835437.1;locus_tag=RM610_RS04845;product=NUDIX domain-containing protein;protein_id=WP_311541781.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1002342 1002698 . - . ID=gene-RM610_RS04850;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=RM610_RS04850;old_locus_tag=RM610_04870 NZ_JAVRJX010000001.1 Protein Homology CDS 1002342 1002698 . - 0 ID=cds-WP_037574297.1;Parent=gene-RM610_RS04850;Dbxref=GenBank:WP_037574297.1;Name=WP_037574297.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=RM610_RS04850;product=50S ribosomal protein L20;protein_id=WP_037574297.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1002753 1002953 . - . ID=gene-RM610_RS04855;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=RM610_RS04855;old_locus_tag=RM610_04875 NZ_JAVRJX010000001.1 Protein Homology CDS 1002753 1002953 . - 0 ID=cds-WP_014613694.1;Parent=gene-RM610_RS04855;Dbxref=GenBank:WP_014613694.1;Name=WP_014613694.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=RM610_RS04855;product=50S ribosomal protein L35;protein_id=WP_014613694.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1002980 1003507 . - . ID=gene-RM610_RS04860;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=RM610_RS04860;old_locus_tag=RM610_04880 NZ_JAVRJX010000001.1 Protein Homology CDS 1002980 1003507 . - 0 ID=cds-WP_037574628.1;Parent=gene-RM610_RS04860;Dbxref=GenBank:WP_037574628.1;Name=WP_037574628.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=RM610_RS04860;product=translation initiation factor IF-3;protein_id=WP_037574628.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch sequence_feature 1003533 1003667 . - . ID=id-NZ_JAVRJX010000001.1:1003533..1003667;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00558,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000001.1 RefSeq gene 1003709 1005217 . - . ID=gene-RM610_RS04865;Name=RM610_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04865;old_locus_tag=RM610_04885 NZ_JAVRJX010000001.1 Protein Homology CDS 1003709 1005217 . - 0 ID=cds-WP_107369828.1;Parent=gene-RM610_RS04865;Dbxref=GenBank:WP_107369828.1;Name=WP_107369828.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500292.1;locus_tag=RM610_RS04865;product=amino acid permease;protein_id=WP_107369828.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 1005324 1005498 . - . ID=id-NZ_JAVRJX010000001.1:1005324..1005498;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 1005550 1007487 . - . ID=gene-RM610_RS04870;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=RM610_RS04870;old_locus_tag=RM610_04890 NZ_JAVRJX010000001.1 Protein Homology CDS 1005550 1007487 . - 0 ID=cds-WP_107375528.1;Parent=gene-RM610_RS04870;Dbxref=GenBank:WP_107375528.1;Name=WP_107375528.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=RM610_RS04870;product=threonine--tRNA ligase;protein_id=WP_107375528.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1007790 1008713 . - . ID=gene-RM610_RS04875;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=RM610_RS04875;old_locus_tag=RM610_04895 NZ_JAVRJX010000001.1 Protein Homology CDS 1007790 1008713 . - 0 ID=cds-WP_107369826.1;Parent=gene-RM610_RS04875;Dbxref=GenBank:WP_107369826.1;Name=WP_107369826.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425307.1;locus_tag=RM610_RS04875;product=primosomal protein DnaI;protein_id=WP_107369826.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1008710 1010071 . - . ID=gene-RM610_RS04880;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM610_RS04880;old_locus_tag=RM610_04900 NZ_JAVRJX010000001.1 Protein Homology CDS 1008710 1010071 . - 0 ID=cds-WP_107375529.1;Parent=gene-RM610_RS04880;Dbxref=GenBank:WP_107375529.1;Name=WP_107375529.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=RM610_RS04880;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_107375529.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1010073 1010540 . - . ID=gene-RM610_RS04885;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=RM610_RS04885;old_locus_tag=RM610_04905 NZ_JAVRJX010000001.1 Protein Homology CDS 1010073 1010540 . - 0 ID=cds-WP_037574309.1;Parent=gene-RM610_RS04885;Dbxref=GenBank:WP_037574309.1;Name=WP_037574309.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=RM610_RS04885;product=transcriptional regulator NrdR;protein_id=WP_037574309.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1010674 1011684 . - . ID=gene-RM610_RS04890;Name=RM610_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04890;old_locus_tag=RM610_04910 NZ_JAVRJX010000001.1 Protein Homology CDS 1010674 1011684 . - 0 ID=cds-WP_037574312.1;Parent=gene-RM610_RS04890;Dbxref=GenBank:WP_037574312.1;Name=WP_037574312.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=RM610_RS04890;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037574312.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1011914 1012519 . - . ID=gene-RM610_RS04895;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=RM610_RS04895;old_locus_tag=RM610_04915 NZ_JAVRJX010000001.1 Protein Homology CDS 1011914 1012519 . - 0 ID=cds-WP_105985392.1;Parent=gene-RM610_RS04895;Dbxref=GenBank:WP_105985392.1;Name=WP_105985392.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493142.1;locus_tag=RM610_RS04895;product=dephospho-CoA kinase;protein_id=WP_105985392.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1012535 1013407 . - . ID=gene-RM610_RS04900;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=RM610_RS04900;old_locus_tag=RM610_04920 NZ_JAVRJX010000001.1 Protein Homology CDS 1012535 1013407 . - 0 ID=cds-WP_107359022.1;Parent=gene-RM610_RS04900;Dbxref=GenBank:WP_107359022.1;Name=WP_107359022.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=RM610_RS04900;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_107359022.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1013423 1016050 . - . ID=gene-RM610_RS04905;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=RM610_RS04905;old_locus_tag=RM610_04925 NZ_JAVRJX010000001.1 Protein Homology CDS 1013423 1016050 . - 0 ID=cds-WP_311541782.1;Parent=gene-RM610_RS04905;Dbxref=GenBank:WP_311541782.1;Name=WP_311541782.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=RM610_RS04905;product=DNA polymerase I;protein_id=WP_311541782.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1016277 1017977 . - . ID=gene-RM610_RS04910;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=RM610_RS04910;old_locus_tag=RM610_04930 NZ_JAVRJX010000001.1 Protein Homology CDS 1016277 1017977 . - 0 ID=cds-WP_311541783.1;Parent=gene-RM610_RS04910;Dbxref=GenBank:WP_311541783.1;Name=WP_311541783.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=RM610_RS04910;product=two-component system histidine kinase PnpS;protein_id=WP_311541783.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1017978 1018682 . - . ID=gene-RM610_RS04915;Name=RM610_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04915;old_locus_tag=RM610_04935 NZ_JAVRJX010000001.1 Protein Homology CDS 1017978 1018682 . - 0 ID=cds-WP_107359019.1;Parent=gene-RM610_RS04915;Dbxref=GenBank:WP_107359019.1;Name=WP_107359019.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=RM610_RS04915;product=response regulator transcription factor;protein_id=WP_107359019.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1019021 1020283 . - . ID=gene-RM610_RS04920;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=RM610_RS04920;old_locus_tag=RM610_04940 NZ_JAVRJX010000001.1 Protein Homology CDS 1019021 1020283 . - 0 ID=cds-WP_311541784.1;Parent=gene-RM610_RS04920;Dbxref=GenBank:WP_311541784.1;Name=WP_311541784.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613680.1;locus_tag=RM610_RS04920;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_311541784.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1020333 1021454 . - . ID=gene-RM610_RS04925;Name=RM610_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04925;old_locus_tag=RM610_04945 NZ_JAVRJX010000001.1 Protein Homology CDS 1020333 1021454 . - 0 ID=cds-WP_107359017.1;Parent=gene-RM610_RS04925;Dbxref=GenBank:WP_107359017.1;Name=WP_107359017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502341.1;locus_tag=RM610_RS04925;product=citrate synthase;protein_id=WP_107359017.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1021855 1023615 . - . ID=gene-RM610_RS04930;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=RM610_RS04930;old_locus_tag=RM610_04950 NZ_JAVRJX010000001.1 Protein Homology CDS 1021855 1023615 . - 0 ID=cds-WP_311541785.1;Parent=gene-RM610_RS04930;Dbxref=GenBank:WP_311541785.1;Name=WP_311541785.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=RM610_RS04930;product=pyruvate kinase;protein_id=WP_311541785.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1023632 1024603 . - . ID=gene-RM610_RS04935;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=RM610_RS04935;old_locus_tag=RM610_04955 NZ_JAVRJX010000001.1 Protein Homology CDS 1023632 1024603 . - 0 ID=cds-WP_107375533.1;Parent=gene-RM610_RS04935;Dbxref=GenBank:WP_107375533.1;Name=WP_107375533.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=RM610_RS04935;product=6-phosphofructokinase;protein_id=WP_107375533.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1024951 1025895 . - . ID=gene-RM610_RS04940;Name=RM610_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04940;old_locus_tag=RM610_04960 NZ_JAVRJX010000001.1 Protein Homology CDS 1024951 1025895 . - 0 ID=cds-WP_107381061.1;Parent=gene-RM610_RS04940;Dbxref=GenBank:WP_107381061.1;Name=WP_107381061.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=RM610_RS04940;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_107381061.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1025895 1026755 . - . ID=gene-RM610_RS04945;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=RM610_RS04945;old_locus_tag=RM610_04965 NZ_JAVRJX010000001.1 Protein Homology CDS 1025895 1026755 . - 0 ID=cds-WP_107369816.1;Parent=gene-RM610_RS04945;Dbxref=GenBank:WP_107369816.1;Name=WP_107369816.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440197.1;locus_tag=RM610_RS04945;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_107369816.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1026792 1028021 . - . ID=gene-RM610_RS04950;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=RM610_RS04950;old_locus_tag=RM610_04970 NZ_JAVRJX010000001.1 Protein Homology CDS 1026792 1028021 . - 0 ID=cds-WP_107375536.1;Parent=gene-RM610_RS04950;Dbxref=GenBank:WP_107375536.1;Name=WP_107375536.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500315.1;locus_tag=RM610_RS04950;product=NADP-dependent malic enzyme;protein_id=WP_107375536.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1028139 1031336 . - . ID=gene-RM610_RS04955;Name=RM610_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04955;old_locus_tag=RM610_04975 NZ_JAVRJX010000001.1 Protein Homology CDS 1028139 1031336 . - 0 ID=cds-WP_311541787.1;Parent=gene-RM610_RS04955;Dbxref=GenBank:WP_311541787.1;Name=WP_311541787.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613673.1;locus_tag=RM610_RS04955;product=DNA polymerase III subunit alpha;protein_id=WP_311541787.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1031361 1032296 . - . ID=gene-RM610_RS04960;Name=RM610_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04960;old_locus_tag=RM610_04980 NZ_JAVRJX010000001.1 Protein Homology CDS 1031361 1032296 . - 0 ID=cds-WP_107359010.1;Parent=gene-RM610_RS04960;Dbxref=GenBank:WP_107359010.1;Name=WP_107359010.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665952.1;locus_tag=RM610_RS04960;product=DHH family phosphoesterase;protein_id=WP_107359010.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1032310 1033605 . - . ID=gene-RM610_RS04965;Name=RM610_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04965;old_locus_tag=RM610_04985 NZ_JAVRJX010000001.1 Protein Homology CDS 1032310 1033605 . - 0 ID=cds-WP_107369812.1;Parent=gene-RM610_RS04965;Dbxref=GenBank:WP_107369812.1;Name=WP_107369812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=RM610_RS04965;product=DRTGG domain-containing protein;protein_id=WP_107369812.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1033790 1034203 . + . ID=gene-RM610_RS04970;Name=RM610_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04970;old_locus_tag=RM610_04990 NZ_JAVRJX010000001.1 Protein Homology CDS 1033790 1034203 . + 0 ID=cds-WP_107381071.1;Parent=gene-RM610_RS04970;Dbxref=GenBank:WP_107381071.1;Name=WP_107381071.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=RM610_RS04970;product=universal stress protein;protein_id=WP_107381071.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1034358 1035053 . - . ID=gene-RM610_RS04975;Name=RM610_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04975;old_locus_tag=RM610_04995 NZ_JAVRJX010000001.1 Protein Homology CDS 1034358 1035053 . - 0 ID=cds-WP_311541789.1;Parent=gene-RM610_RS04975;Dbxref=GenBank:WP_311541789.1;Name=WP_311541789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503615.1;locus_tag=RM610_RS04975;product=metal-dependent hydrolase;protein_id=WP_311541789.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1035176 1036231 . + . ID=gene-RM610_RS04980;Name=RM610_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04980;old_locus_tag=RM610_05000 NZ_JAVRJX010000001.1 Protein Homology CDS 1035176 1036231 . + 0 ID=cds-WP_107381064.1;Parent=gene-RM610_RS04980;Dbxref=GenBank:WP_107381064.1;Name=WP_107381064.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=RM610_RS04980;product=M24 family metallopeptidase;protein_id=WP_107381064.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1036311 1037426 . - . ID=gene-RM610_RS04985;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=RM610_RS04985;old_locus_tag=RM610_05005 NZ_JAVRJX010000001.1 Protein Homology CDS 1036311 1037426 . - 0 ID=cds-WP_311541790.1;Parent=gene-RM610_RS04985;Dbxref=GenBank:WP_311541790.1;Name=WP_311541790.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381928.1;locus_tag=RM610_RS04985;product=alanine dehydrogenase;protein_id=WP_311541790.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1037574 1038074 . + . ID=gene-RM610_RS04990;Name=RM610_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04990;old_locus_tag=RM610_05010 NZ_JAVRJX010000001.1 Protein Homology CDS 1037574 1038074 . + 0 ID=cds-WP_107375539.1;Parent=gene-RM610_RS04990;Dbxref=GenBank:WP_107375539.1;Name=WP_107375539.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=RM610_RS04990;product=universal stress protein;protein_id=WP_107375539.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1038271 1039467 . - . ID=gene-RM610_RS04995;Name=RM610_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS04995;old_locus_tag=RM610_05015 NZ_JAVRJX010000001.1 Protein Homology CDS 1038271 1039467 . - 0 ID=cds-WP_107359004.1;Parent=gene-RM610_RS04995;Dbxref=GenBank:WP_107359004.1;Name=WP_107359004.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275513.1;locus_tag=RM610_RS04995;product=acetate kinase;protein_id=WP_107359004.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1039549 1040496 . - . ID=gene-RM610_RS05000;Name=RM610_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05000;old_locus_tag=RM610_05020 NZ_JAVRJX010000001.1 Protein Homology CDS 1039549 1040496 . - 0 ID=cds-WP_107359003.1;Parent=gene-RM610_RS05000;Dbxref=GenBank:WP_107359003.1;Name=WP_107359003.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832682.1;locus_tag=RM610_RS05000;product=class I SAM-dependent methyltransferase;protein_id=WP_107359003.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1040568 1041062 . - . ID=gene-RM610_RS05005;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=RM610_RS05005;old_locus_tag=RM610_05025 NZ_JAVRJX010000001.1 Protein Homology CDS 1040568 1041062 . - 0 ID=cds-WP_107359002.1;Parent=gene-RM610_RS05005;Dbxref=GenBank:WP_107359002.1;Name=WP_107359002.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275511.1;locus_tag=RM610_RS05005;product=thiol peroxidase;protein_id=WP_107359002.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1041152 1041925 . - . ID=gene-RM610_RS05010;Name=RM610_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05010;old_locus_tag=RM610_05030 NZ_JAVRJX010000001.1 Protein Homology CDS 1041152 1041925 . - 0 ID=cds-WP_107364278.1;Parent=gene-RM610_RS05010;Dbxref=GenBank:WP_107364278.1;Name=WP_107364278.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500328.1;locus_tag=RM610_RS05010;product=sulfite exporter TauE/SafE family protein;protein_id=WP_107364278.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1041946 1043166 . - . ID=gene-RM610_RS05015;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=RM610_RS05015;old_locus_tag=RM610_05035 NZ_JAVRJX010000001.1 Protein Homology CDS 1041946 1043166 . - 0 ID=cds-WP_107359000.1;Parent=gene-RM610_RS05015;Dbxref=GenBank:WP_107359000.1;Name=WP_107359000.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165374.1;locus_tag=RM610_RS05015;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_107359000.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1043163 1044299 . - . ID=gene-RM610_RS05020;Name=RM610_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05020;old_locus_tag=RM610_05040 NZ_JAVRJX010000001.1 Protein Homology CDS 1043163 1044299 . - 0 ID=cds-WP_107358999.1;Parent=gene-RM610_RS05020;Dbxref=GenBank:WP_107358999.1;Name=WP_107358999.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=RM610_RS05020;product=cysteine desulfurase family protein;protein_id=WP_107358999.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1044575 1046275 . - . ID=gene-RM610_RS05025;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=RM610_RS05025;old_locus_tag=RM610_05045 NZ_JAVRJX010000001.1 Protein Homology CDS 1044575 1046275 . - 0 ID=cds-WP_107369776.1;Parent=gene-RM610_RS05025;Dbxref=GenBank:WP_107369776.1;Name=WP_107369776.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425340.1;locus_tag=RM610_RS05025;product=septation ring formation regulator EzrA;protein_id=WP_107369776.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1046445 1046900 . + . ID=gene-RM610_RS05030;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=RM610_RS05030;old_locus_tag=RM610_05050 NZ_JAVRJX010000001.1 Protein Homology CDS 1046445 1046900 . + 0 ID=cds-WP_037574375.1;Parent=gene-RM610_RS05030;Dbxref=GenBank:WP_037574375.1;Name=WP_037574375.1;Note=Replaces NBR011098.;Ontology_term=GO:0033745;gbkey=CDS;gene=msrC;go_function=L-methionine (R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165371.1;locus_tag=RM610_RS05030;product=free L-methionine (R)-S-oxide reductase MsrC;protein_id=WP_037574375.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1047128 1047730 . + . ID=gene-RM610_RS05035;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=RM610_RS05035;old_locus_tag=RM610_05055 NZ_JAVRJX010000001.1 Protein Homology CDS 1047128 1047730 . + 0 ID=cds-WP_037574377.1;Parent=gene-RM610_RS05035;Dbxref=GenBank:WP_037574377.1;Name=WP_037574377.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=RM610_RS05035;product=30S ribosomal protein S4;protein_id=WP_037574377.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1047902 1048861 . + . ID=gene-RM610_RS05040;Name=RM610_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05040;old_locus_tag=RM610_05060 NZ_JAVRJX010000001.1 Protein Homology CDS 1047902 1048861 . + 0 ID=cds-WP_107358995.1;Parent=gene-RM610_RS05040;Dbxref=GenBank:WP_107358995.1;Name=WP_107358995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425344.1;locus_tag=RM610_RS05040;product=ornithine cyclodeaminase family protein;protein_id=WP_107358995.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1048990 1049733 . - . ID=gene-RM610_RS05045;Name=RM610_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05045;old_locus_tag=RM610_05065 NZ_JAVRJX010000001.1 Protein Homology CDS 1048990 1049733 . - 0 ID=cds-WP_107358994.1;Parent=gene-RM610_RS05045;Dbxref=GenBank:WP_107358994.1;Name=WP_107358994.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176108.1;locus_tag=RM610_RS05045;product=glycerophosphodiester phosphodiesterase;protein_id=WP_107358994.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1049810 1050256 . + . ID=gene-RM610_RS05050;Name=RM610_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05050;old_locus_tag=RM610_05070 NZ_JAVRJX010000001.1 Protein Homology CDS 1049810 1050256 . + 0 ID=cds-WP_194745875.1;Parent=gene-RM610_RS05050;Dbxref=GenBank:WP_194745875.1;Name=WP_194745875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=RM610_RS05050;product=SACOL1771 family peroxiredoxin;protein_id=WP_194745875.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1050346 1051506 . + . ID=gene-RM610_RS05055;Name=RM610_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05055;old_locus_tag=RM610_05075 NZ_JAVRJX010000001.1 Protein Homology CDS 1050346 1051506 . + 0 ID=cds-WP_311541791.1;Parent=gene-RM610_RS05055;Dbxref=GenBank:WP_311541791.1;Name=WP_311541791.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=RM610_RS05055;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_311541791.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1051496 1053088 . + . ID=gene-RM610_RS05060;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=RM610_RS05060;old_locus_tag=RM610_05080 NZ_JAVRJX010000001.1 Protein Homology CDS 1051496 1053088 . + 0 ID=cds-WP_194745876.1;Parent=gene-RM610_RS05060;Dbxref=GenBank:WP_194745876.1;Name=WP_194745876.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168054.1;locus_tag=RM610_RS05060;product=phosphoglycerate dehydrogenase;protein_id=WP_194745876.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1053228 1054355 . - . ID=gene-RM610_RS05065;Name=RM610_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05065;old_locus_tag=RM610_05085 NZ_JAVRJX010000001.1 Protein Homology CDS 1053228 1054355 . - 0 ID=cds-WP_311541792.1;Parent=gene-RM610_RS05065;Dbxref=GenBank:WP_311541792.1;Name=WP_311541792.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=RM610_RS05065;product=HAD family hydrolase;protein_id=WP_311541792.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1054563 1055180 . - . ID=gene-RM610_RS05070;Name=RM610_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05070;old_locus_tag=RM610_05090 NZ_JAVRJX010000001.1 Protein Homology CDS 1054563 1055180 . - 0 ID=cds-WP_107358989.1;Parent=gene-RM610_RS05070;Dbxref=GenBank:WP_107358989.1;Name=WP_107358989.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467413.1;locus_tag=RM610_RS05070;product=lysophospholipid acyltransferase family protein;protein_id=WP_107358989.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1055335 1056564 . + . ID=gene-RM610_RS05075;Name=RM610_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05075;old_locus_tag=RM610_05095 NZ_JAVRJX010000001.1 Protein Homology CDS 1055335 1056564 . + 0 ID=cds-WP_311541793.1;Parent=gene-RM610_RS05075;Dbxref=GenBank:WP_311541793.1;Name=WP_311541793.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507328.1;locus_tag=RM610_RS05075;product=S1C family serine protease;protein_id=WP_311541793.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1056613 1057875 . - . ID=gene-RM610_RS05080;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=RM610_RS05080;old_locus_tag=RM610_05100 NZ_JAVRJX010000001.1 Protein Homology CDS 1056613 1057875 . - 0 ID=cds-WP_311541794.1;Parent=gene-RM610_RS05080;Dbxref=GenBank:WP_311541794.1;Name=WP_311541794.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=RM610_RS05080;product=tyrosine--tRNA ligase;protein_id=WP_311541794.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1058285 1059106 . + . ID=gene-RM610_RS05085;Name=RM610_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05085;old_locus_tag=RM610_05105 NZ_JAVRJX010000001.1 Protein Homology CDS 1058285 1059106 . + 0 ID=cds-WP_311542020.1;Parent=gene-RM610_RS05085;Dbxref=GenBank:WP_311542020.1;Name=WP_311542020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467399.1;locus_tag=RM610_RS05085;product=transglycosylase domain-containing protein;protein_id=WP_311542020.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1059261 1060928 . - . ID=gene-RM610_RS05090;Name=RM610_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05090;old_locus_tag=RM610_05110 NZ_JAVRJX010000001.1 Protein Homology CDS 1059261 1060928 . - 0 ID=cds-WP_311541795.1;Parent=gene-RM610_RS05090;Dbxref=GenBank:WP_311541795.1;Name=WP_311541795.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=RM610_RS05090;product=formate--tetrahydrofolate ligase;protein_id=WP_311541795.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1061349 1063058 . - . ID=gene-RM610_RS05095;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=RM610_RS05095;old_locus_tag=RM610_05115 NZ_JAVRJX010000001.1 Protein Homology CDS 1061349 1063058 . - 0 ID=cds-WP_107358985.1;Parent=gene-RM610_RS05095;Dbxref=GenBank:WP_107358985.1;Name=WP_107358985.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=RM610_RS05095;product=acetate--CoA ligase;protein_id=WP_107358985.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1063213 1063845 . + . ID=gene-RM610_RS05100;Name=RM610_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05100;old_locus_tag=RM610_05120 NZ_JAVRJX010000001.1 Protein Homology CDS 1063213 1063845 . + 0 ID=cds-WP_107364490.1;Parent=gene-RM610_RS05100;Dbxref=GenBank:WP_107364490.1;Name=WP_107364490.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=RM610_RS05100;product=GNAT family N-acetyltransferase;protein_id=WP_107364490.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1063862 1065016 . + . ID=gene-RM610_RS05105;Name=RM610_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05105;old_locus_tag=RM610_05125 NZ_JAVRJX010000001.1 Protein Homology CDS 1063862 1065016 . + 0 ID=cds-WP_107358983.1;Parent=gene-RM610_RS05105;Dbxref=GenBank:WP_107358983.1;Name=WP_107358983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900585.1;locus_tag=RM610_RS05105;product=acetoin utilization protein AcuC;protein_id=WP_107358983.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1065129 1066121 . - . ID=gene-RM610_RS05110;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=RM610_RS05110;old_locus_tag=RM610_05130 NZ_JAVRJX010000001.1 Protein Homology CDS 1065129 1066121 . - 0 ID=cds-WP_107369769.1;Parent=gene-RM610_RS05110;Dbxref=GenBank:WP_107369769.1;Name=WP_107369769.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=RM610_RS05110;product=catabolite control protein A;protein_id=WP_107369769.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1066326 1067417 . - . ID=gene-RM610_RS05115;Name=RM610_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05115;old_locus_tag=RM610_05135 NZ_JAVRJX010000001.1 Protein Homology CDS 1066326 1067417 . - 0 ID=cds-WP_107358981.1;Parent=gene-RM610_RS05115;Dbxref=GenBank:WP_107358981.1;Name=WP_107358981.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=RM610_RS05115;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_107358981.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1067689 1068624 . - . ID=gene-RM610_RS05120;Name=RM610_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05120;old_locus_tag=RM610_05140 NZ_JAVRJX010000001.1 Protein Homology CDS 1067689 1068624 . - 0 ID=cds-WP_107358980.1;Parent=gene-RM610_RS05120;Dbxref=GenBank:WP_107358980.1;Name=WP_107358980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165041.1;locus_tag=RM610_RS05120;product=hypothetical protein;protein_id=WP_107358980.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1068988 1069464 . - . ID=gene-RM610_RS05125;Name=RM610_RS05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05125;old_locus_tag=RM610_05145;partial=true;pseudo=true;start_range=.,1068988 NZ_JAVRJX010000001.1 Protein Homology CDS 1068988 1069464 . - 0 ID=cds-RM610_RS05125;Parent=gene-RM610_RS05125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500359.1;locus_tag=RM610_RS05125;partial=true;product=DUF948 domain-containing protein;pseudo=true;start_range=.,1068988;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1069541 1070854 . - . ID=gene-RM610_RS05130;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=RM610_RS05130;old_locus_tag=RM610_05150 NZ_JAVRJX010000001.1 Protein Homology CDS 1069541 1070854 . - 0 ID=cds-WP_311541796.1;Parent=gene-RM610_RS05130;Dbxref=GenBank:WP_311541796.1;Name=WP_311541796.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275483.1;locus_tag=RM610_RS05130;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_311541796.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1070880 1074194 . - . ID=gene-RM610_RS05135;Name=RM610_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05135;old_locus_tag=RM610_05155 NZ_JAVRJX010000001.1 Protein Homology CDS 1070880 1074194 . - 0 ID=cds-WP_311541797.1;Parent=gene-RM610_RS05135;Dbxref=GenBank:WP_311541797.1;Name=WP_311541797.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729330.1;locus_tag=RM610_RS05135;product=DNA translocase FtsK;protein_id=WP_311541797.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1074209 1074808 . - . ID=gene-RM610_RS05140;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=RM610_RS05140;old_locus_tag=RM610_05160 NZ_JAVRJX010000001.1 Protein Homology CDS 1074209 1074808 . - 0 ID=cds-WP_107358976.1;Parent=gene-RM610_RS05140;Dbxref=GenBank:WP_107358976.1;Name=WP_107358976.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=RM610_RS05140;product=YtpR family tRNA-binding protein;protein_id=WP_107358976.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1074817 1075677 . - . ID=gene-RM610_RS05145;Name=RM610_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05145;old_locus_tag=RM610_05165 NZ_JAVRJX010000001.1 Protein Homology CDS 1074817 1075677 . - 0 ID=cds-WP_107369764.1;Parent=gene-RM610_RS05145;Dbxref=GenBank:WP_107369764.1;Name=WP_107369764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=RM610_RS05145;product=DUF1444 domain-containing protein;protein_id=WP_107369764.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1075770 1076078 . - . ID=gene-RM610_RS05150;Name=RM610_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05150;old_locus_tag=RM610_05170 NZ_JAVRJX010000001.1 Protein Homology CDS 1075770 1076078 . - 0 ID=cds-WP_233649533.1;Parent=gene-RM610_RS05150;Dbxref=GenBank:WP_233649533.1;Name=WP_233649533.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471204.1;locus_tag=RM610_RS05150;product=thioredoxin family protein;protein_id=WP_233649533.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1076092 1077171 . - . ID=gene-RM610_RS05155;Name=RM610_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05155;old_locus_tag=RM610_05175 NZ_JAVRJX010000001.1 Protein Homology CDS 1076092 1077171 . - 0 ID=cds-WP_107358973.1;Parent=gene-RM610_RS05155;Dbxref=GenBank:WP_107358973.1;Name=WP_107358973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507312.1;locus_tag=RM610_RS05155;product=M42 family metallopeptidase;protein_id=WP_107358973.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1077254 1077571 . + . ID=gene-RM610_RS05160;Name=RM610_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05160;old_locus_tag=RM610_05180 NZ_JAVRJX010000001.1 Protein Homology CDS 1077254 1077571 . + 0 ID=cds-WP_311541798.1;Parent=gene-RM610_RS05160;Dbxref=GenBank:WP_311541798.1;Name=WP_311541798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=RM610_RS05160;product=hypothetical protein;protein_id=WP_311541798.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1077740 1078585 . - . ID=gene-RM610_RS05165;Name=RM610_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05165;old_locus_tag=RM610_05185 NZ_JAVRJX010000001.1 Protein Homology CDS 1077740 1078585 . - 0 ID=cds-WP_107381484.1;Parent=gene-RM610_RS05165;Dbxref=GenBank:WP_107381484.1;Name=WP_107381484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500367.1;locus_tag=RM610_RS05165;product=YtnP family quorum-quenching lactonase;protein_id=WP_107381484.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1078672 1079337 . - . ID=gene-RM610_RS05170;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=RM610_RS05170;old_locus_tag=RM610_05190 NZ_JAVRJX010000001.1 Protein Homology CDS 1078672 1079337 . - 0 ID=cds-WP_107358970.1;Parent=gene-RM610_RS05170;Dbxref=GenBank:WP_107358970.1;Name=WP_107358970.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168407.1;locus_tag=RM610_RS05170;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_107358970.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1079352 1080143 . - . ID=gene-RM610_RS05175;Name=RM610_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05175;old_locus_tag=RM610_05195 NZ_JAVRJX010000001.1 Protein Homology CDS 1079352 1080143 . - 0 ID=cds-WP_311541799.1;Parent=gene-RM610_RS05175;Dbxref=GenBank:WP_311541799.1;Name=WP_311541799.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=RM610_RS05175;product=phosphotransferase family protein;protein_id=WP_311541799.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1080374 1081222 . - . ID=gene-RM610_RS05180;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=RM610_RS05180;old_locus_tag=RM610_05200 NZ_JAVRJX010000001.1 Protein Homology CDS 1080374 1081222 . - 0 ID=cds-WP_107369762.1;Parent=gene-RM610_RS05180;Dbxref=GenBank:WP_107369762.1;Name=WP_107369762.1;Ontology_term=GO:0042853,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275473.1;locus_tag=RM610_RS05180;product=D-amino-acid transaminase;protein_id=WP_107369762.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1081224 1082633 . - . ID=gene-RM610_RS05185;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=RM610_RS05185;old_locus_tag=RM610_05205 NZ_JAVRJX010000001.1 Protein Homology CDS 1081224 1082633 . - 0 ID=cds-WP_311541800.1;Parent=gene-RM610_RS05185;Dbxref=GenBank:WP_311541800.1;Name=WP_311541800.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=RM610_RS05185;product=dipeptidase PepV;protein_id=WP_311541800.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1082837 1083241 . - . ID=gene-RM610_RS05190;Name=RM610_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05190;old_locus_tag=RM610_05210 NZ_JAVRJX010000001.1 Protein Homology CDS 1082837 1083241 . - 0 ID=cds-WP_107358967.1;Parent=gene-RM610_RS05190;Dbxref=GenBank:WP_107358967.1;Name=WP_107358967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425376.1;locus_tag=RM610_RS05190;product=YtxH domain-containing protein;protein_id=WP_107358967.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1083348 1084064 . - . ID=gene-RM610_RS05195;Name=RM610_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05195;old_locus_tag=RM610_05215 NZ_JAVRJX010000001.1 Protein Homology CDS 1083348 1084064 . - 0 ID=cds-WP_311541801.1;Parent=gene-RM610_RS05195;Dbxref=GenBank:WP_311541801.1;Name=WP_311541801.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507304.1;locus_tag=RM610_RS05195;product=pseudouridine synthase;protein_id=WP_311541801.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1084064 1085704 . - . ID=gene-RM610_RS05200;Name=RM610_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05200;old_locus_tag=RM610_05220 NZ_JAVRJX010000001.1 Protein Homology CDS 1084064 1085704 . - 0 ID=cds-WP_037574447.1;Parent=gene-RM610_RS05200;Dbxref=GenBank:WP_037574447.1;Name=WP_037574447.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381978.1;locus_tag=RM610_RS05200;product=putative polysaccharide biosynthesis protein;protein_id=WP_037574447.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1085821 1087083 . + . ID=gene-RM610_RS05205;Name=RM610_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05205;old_locus_tag=RM610_05225 NZ_JAVRJX010000001.1 Protein Homology CDS 1085821 1087083 . + 0 ID=cds-WP_311541802.1;Parent=gene-RM610_RS05205;Dbxref=GenBank:WP_311541802.1;Name=WP_311541802.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500375.1;locus_tag=RM610_RS05205;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311541802.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1087355 1087666 . - . ID=gene-RM610_RS05210;Name=RM610_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05210;old_locus_tag=RM610_05230 NZ_JAVRJX010000001.1 Protein Homology CDS 1087355 1087666 . - 0 ID=cds-WP_037574451.1;Parent=gene-RM610_RS05210;Dbxref=GenBank:WP_037574451.1;Name=WP_037574451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166097.1;locus_tag=RM610_RS05210;product=rhodanese-like domain-containing protein;protein_id=WP_037574451.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1087693 1090104 . - . ID=gene-RM610_RS05215;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=RM610_RS05215;old_locus_tag=RM610_05235 NZ_JAVRJX010000001.1 Protein Homology CDS 1087693 1090104 . - 0 ID=cds-WP_107358964.1;Parent=gene-RM610_RS05215;Dbxref=GenBank:WP_107358964.1;Name=WP_107358964.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235960.1;locus_tag=RM610_RS05215;product=leucine--tRNA ligase;protein_id=WP_107358964.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch binding_site 1090152 1090335 . - . ID=id-NZ_JAVRJX010000001.1:1090152..1090335;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000001.1 RefSeq gene 1090468 1091649 . - . ID=gene-RM610_RS05220;Name=RM610_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05220;old_locus_tag=RM610_05240 NZ_JAVRJX010000001.1 Protein Homology CDS 1090468 1091649 . - 0 ID=cds-WP_311541803.1;Parent=gene-RM610_RS05220;Dbxref=GenBank:WP_311541803.1;Name=WP_311541803.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425383.1;locus_tag=RM610_RS05220;product=MDR family MFS transporter;protein_id=WP_311541803.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1091761 1092720 . + . ID=gene-RM610_RS05225;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=RM610_RS05225;old_locus_tag=RM610_05245 NZ_JAVRJX010000001.1 Protein Homology CDS 1091761 1092720 . + 0 ID=cds-WP_107358962.1;Parent=gene-RM610_RS05225;Dbxref=GenBank:WP_107358962.1;Name=WP_107358962.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443468.1;locus_tag=RM610_RS05225;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_107358962.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1092717 1093289 . + . ID=gene-RM610_RS05230;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=RM610_RS05230;old_locus_tag=RM610_05250 NZ_JAVRJX010000001.1 Protein Homology CDS 1092717 1093289 . + 0 ID=cds-WP_107358961.1;Parent=gene-RM610_RS05230;Dbxref=GenBank:WP_107358961.1;Name=WP_107358961.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466231.1;locus_tag=RM610_RS05230;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_107358961.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1093407 1093817 . - . ID=gene-RM610_RS05235;Name=RM610_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05235;old_locus_tag=RM610_05255 NZ_JAVRJX010000001.1 Protein Homology CDS 1093407 1093817 . - 0 ID=cds-WP_107358960.1;Parent=gene-RM610_RS05235;Dbxref=GenBank:WP_107358960.1;Name=WP_107358960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381988.1;locus_tag=RM610_RS05235;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_107358960.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1093962 1094918 . - . ID=gene-RM610_RS05240;Name=RM610_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05240;old_locus_tag=RM610_05260 NZ_JAVRJX010000001.1 Protein Homology CDS 1093962 1094918 . - 0 ID=cds-WP_107358959.1;Parent=gene-RM610_RS05240;Dbxref=GenBank:WP_107358959.1;Name=WP_107358959.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425387.1;locus_tag=RM610_RS05240;product=L-lactate dehydrogenase;protein_id=WP_107358959.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1095039 1095860 . - . ID=gene-RM610_RS05245;Name=RM610_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05245;old_locus_tag=RM610_05265 NZ_JAVRJX010000001.1 Protein Homology CDS 1095039 1095860 . - 0 ID=cds-WP_037574472.1;Parent=gene-RM610_RS05245;Dbxref=GenBank:WP_037574472.1;Name=WP_037574472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=RM610_RS05245;product=alpha/beta fold hydrolase;protein_id=WP_037574472.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1096057 1096389 . - . ID=gene-RM610_RS05250;Name=RM610_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05250;old_locus_tag=RM610_05270 NZ_JAVRJX010000001.1 Protein Homology CDS 1096057 1096389 . - 0 ID=cds-WP_107375979.1;Parent=gene-RM610_RS05250;Dbxref=GenBank:WP_107375979.1;Name=WP_107375979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425389.1;locus_tag=RM610_RS05250;product=hypothetical protein;protein_id=WP_107375979.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1096916 1097962 . + . ID=gene-RM610_RS05255;Name=RM610_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05255;old_locus_tag=RM610_05275 NZ_JAVRJX010000001.1 Protein Homology CDS 1096916 1097962 . + 0 ID=cds-WP_311541806.1;Parent=gene-RM610_RS05255;Dbxref=GenBank:WP_311541806.1;Name=WP_311541806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166088.1;locus_tag=RM610_RS05255;product=proline dehydrogenase family protein;protein_id=WP_311541806.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1098110 1098349 . - . ID=gene-RM610_RS05260;Name=RM610_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05260;old_locus_tag=RM610_05280 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1098110 1098349 . - 0 ID=cds-WP_311541807.1;Parent=gene-RM610_RS05260;Dbxref=GenBank:WP_311541807.1;Name=WP_311541807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05260;product=hypothetical protein;protein_id=WP_311541807.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1098930 1099388 . - . ID=gene-RM610_RS05265;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=RM610_RS05265;old_locus_tag=RM610_05285 NZ_JAVRJX010000001.1 Protein Homology CDS 1098930 1099388 . - 0 ID=cds-WP_107359828.1;Parent=gene-RM610_RS05265;Dbxref=GenBank:WP_107359828.1;Name=WP_107359828.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425392.1;locus_tag=RM610_RS05265;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_107359828.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1099406 1100587 . - . ID=gene-RM610_RS05270;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=RM610_RS05270;old_locus_tag=RM610_05290 NZ_JAVRJX010000001.1 Protein Homology CDS 1099406 1100587 . - 0 ID=cds-WP_311541808.1;Parent=gene-RM610_RS05270;Dbxref=GenBank:WP_311541808.1;Name=WP_311541808.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=RM610_RS05270;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_311541808.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1100601 1101230 . - . ID=gene-RM610_RS05275;Name=RM610_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05275;old_locus_tag=RM610_05295 NZ_JAVRJX010000001.1 Protein Homology CDS 1100601 1101230 . - 0 ID=cds-WP_107359830.1;Parent=gene-RM610_RS05275;Dbxref=GenBank:WP_107359830.1;Name=WP_107359830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=RM610_RS05275;product=riboflavin synthase;protein_id=WP_107359830.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1101235 1102281 . - . ID=gene-RM610_RS05280;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=RM610_RS05280;old_locus_tag=RM610_05300 NZ_JAVRJX010000001.1 Protein Homology CDS 1101235 1102281 . - 0 ID=cds-WP_107359831.1;Parent=gene-RM610_RS05280;Dbxref=GenBank:WP_107359831.1;Name=WP_107359831.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474980.1;locus_tag=RM610_RS05280;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_107359831.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 1102426 1102555 . - . ID=id-NZ_JAVRJX010000001.1:1102426..1102555;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 1102670 1104298 . - . ID=gene-RM610_RS05285;Name=RM610_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05285;old_locus_tag=RM610_05305 NZ_JAVRJX010000001.1 Protein Homology CDS 1102670 1104298 . - 0 ID=cds-WP_107370142.1;Parent=gene-RM610_RS05285;Dbxref=GenBank:WP_107370142.1;Name=WP_107370142.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381997.1;locus_tag=RM610_RS05285;product=FAD/NAD(P)-binding protein;protein_id=WP_107370142.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1104832 1105698 . - . ID=gene-RM610_RS05290;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=RM610_RS05290;old_locus_tag=RM610_05310 NZ_JAVRJX010000001.1 Protein Homology CDS 1104832 1105698 . - 0 ID=cds-WP_107359833.1;Parent=gene-RM610_RS05290;Dbxref=GenBank:WP_107359833.1;Name=WP_107359833.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=RM610_RS05290;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_107359833.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1105861 1106085 . - . ID=gene-RM610_RS05295;Name=RM610_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05295;old_locus_tag=RM610_05315 NZ_JAVRJX010000001.1 Protein Homology CDS 1105861 1106085 . - 0 ID=cds-WP_107359834.1;Parent=gene-RM610_RS05295;Dbxref=GenBank:WP_107359834.1;Name=WP_107359834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468074.1;locus_tag=RM610_RS05295;product=hypothetical protein;protein_id=WP_107359834.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1106281 1106748 . + . ID=gene-RM610_RS05300;Name=RM610_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05300;old_locus_tag=RM610_05320 NZ_JAVRJX010000001.1 Protein Homology CDS 1106281 1106748 . + 0 ID=cds-WP_107359835.1;Parent=gene-RM610_RS05300;Dbxref=GenBank:WP_107359835.1;Name=WP_107359835.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=RM610_RS05300;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_107359835.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1106766 1107194 . + . ID=gene-RM610_RS05305;Name=RM610_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05305;old_locus_tag=RM610_05325 NZ_JAVRJX010000001.1 Protein Homology CDS 1106766 1107194 . + 0 ID=cds-WP_157946119.1;Parent=gene-RM610_RS05305;Dbxref=GenBank:WP_157946119.1;Name=WP_157946119.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF018087.7;locus_tag=RM610_RS05305;product=competence protein ComK;protein_id=WP_157946119.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1107174 1107626 . - . ID=gene-RM610_RS05310;Name=RM610_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05310;old_locus_tag=RM610_05330 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1107174 1107626 . - 0 ID=cds-WP_107375973.1;Parent=gene-RM610_RS05310;Dbxref=GenBank:WP_107375973.1;Name=WP_107375973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05310;product=hypothetical protein;protein_id=WP_107375973.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1107727 1108437 . - . ID=gene-RM610_RS05315;Name=RM610_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05315;old_locus_tag=RM610_05335 NZ_JAVRJX010000001.1 Protein Homology CDS 1107727 1108437 . - 0 ID=cds-WP_311541809.1;Parent=gene-RM610_RS05315;Dbxref=GenBank:WP_311541809.1;Name=WP_311541809.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=RM610_RS05315;product=transaldolase;protein_id=WP_311541809.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1108587 1108889 . + . ID=gene-RM610_RS05320;Name=RM610_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05320;old_locus_tag=RM610_05340 NZ_JAVRJX010000001.1 Protein Homology CDS 1108587 1108889 . + 0 ID=cds-WP_107381858.1;Parent=gene-RM610_RS05320;Dbxref=GenBank:WP_107381858.1;Name=WP_107381858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=RM610_RS05320;product=hypothetical protein;protein_id=WP_107381858.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1108907 1109272 . + . ID=gene-RM610_RS05325;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=RM610_RS05325;old_locus_tag=RM610_05345 NZ_JAVRJX010000001.1 Protein Homology CDS 1108907 1109272 . + 0 ID=cds-WP_107359812.1;Parent=gene-RM610_RS05325;Dbxref=GenBank:WP_107359812.1;Name=WP_107359812.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507277.1;locus_tag=RM610_RS05325;product=fluoride efflux transporter CrcB;protein_id=WP_107359812.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1109269 1109649 . + . ID=gene-RM610_RS05330;Name=RM610_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05330;old_locus_tag=RM610_05350 NZ_JAVRJX010000001.1 Protein Homology CDS 1109269 1109649 . + 0 ID=cds-WP_107359811.1;Parent=gene-RM610_RS05330;Dbxref=GenBank:WP_107359811.1;Name=WP_107359811.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014584.7;locus_tag=RM610_RS05330;product=fluoride efflux transporter FluC;protein_id=WP_107359811.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1109776 1110612 . - . ID=gene-RM610_RS05335;Name=RM610_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05335;old_locus_tag=RM610_05355 NZ_JAVRJX010000001.1 Protein Homology CDS 1109776 1110612 . - 0 ID=cds-WP_107359810.1;Parent=gene-RM610_RS05335;Dbxref=GenBank:WP_107359810.1;Name=WP_107359810.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=RM610_RS05335;product=aldo/keto reductase;protein_id=WP_107359810.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1110864 1111772 . - . ID=gene-RM610_RS05340;Name=RM610_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05340;old_locus_tag=RM610_05360 NZ_JAVRJX010000001.1 Protein Homology CDS 1110864 1111772 . - 0 ID=cds-WP_107381802.1;Parent=gene-RM610_RS05340;Dbxref=GenBank:WP_107381802.1;Name=WP_107381802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452130.1;locus_tag=RM610_RS05340;product=NERD domain-containing protein;protein_id=WP_107381802.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1111862 1113061 . - . ID=gene-RM610_RS05345;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=RM610_RS05345;old_locus_tag=RM610_05365 NZ_JAVRJX010000001.1 Protein Homology CDS 1111862 1113061 . - 0 ID=cds-WP_107359808.1;Parent=gene-RM610_RS05345;Dbxref=GenBank:WP_107359808.1;Name=WP_107359808.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=RM610_RS05345;product=methionine adenosyltransferase;protein_id=WP_107359808.1;transl_table=11 NZ_JAVRJX010000001.1 cmsearch riboswitch 1113170 1113280 . - . ID=id-NZ_JAVRJX010000001.1:1113170..1113280;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000001.1 RefSeq gene 1113494 1115074 . + . ID=gene-RM610_RS05350;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=RM610_RS05350;old_locus_tag=RM610_05370 NZ_JAVRJX010000001.1 Protein Homology CDS 1113494 1115074 . + 0 ID=cds-WP_107359807.1;Parent=gene-RM610_RS05350;Dbxref=GenBank:WP_107359807.1;Name=WP_107359807.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=RM610_RS05350;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_107359807.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1115110 1115895 . - . ID=gene-RM610_RS05355;Name=RM610_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05355;old_locus_tag=RM610_05375 NZ_JAVRJX010000001.1 Protein Homology CDS 1115110 1115895 . - 0 ID=cds-WP_182472323.1;Parent=gene-RM610_RS05355;Dbxref=GenBank:WP_182472323.1;Name=WP_182472323.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453503.1;locus_tag=RM610_RS05355;product=alpha/beta hydrolase family protein;protein_id=WP_182472323.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1115882 1116346 . - . ID=gene-RM610_RS05360;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=RM610_RS05360;old_locus_tag=RM610_05380 NZ_JAVRJX010000001.1 Protein Homology CDS 1115882 1116346 . - 0 ID=cds-WP_107359806.1;Parent=gene-RM610_RS05360;Dbxref=GenBank:WP_107359806.1;Name=WP_107359806.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672014.1;locus_tag=RM610_RS05360;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_107359806.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1116409 1116639 . + . ID=gene-RM610_RS05365;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=RM610_RS05365;old_locus_tag=RM610_05385 NZ_JAVRJX010000001.1 Protein Homology CDS 1116409 1116639 . + 0 ID=cds-WP_107359805.1;Parent=gene-RM610_RS05365;Dbxref=GenBank:WP_107359805.1;Name=WP_107359805.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=RM610_RS05365;product=membrane protein insertion efficiency factor YidD;protein_id=WP_107359805.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1116636 1117625 . - . ID=gene-RM610_RS05370;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=RM610_RS05370;old_locus_tag=RM610_05390 NZ_JAVRJX010000001.1 Protein Homology CDS 1116636 1117625 . - 0 ID=cds-WP_311541811.1;Parent=gene-RM610_RS05370;Dbxref=GenBank:WP_311541811.1;Name=WP_311541811.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=RM610_RS05370;product=o-succinylbenzoate synthase;protein_id=WP_311541811.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1117622 1119031 . - . ID=gene-RM610_RS05375;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=RM610_RS05375;old_locus_tag=RM610_05395 NZ_JAVRJX010000001.1 Protein Homology CDS 1117622 1119031 . - 0 ID=cds-WP_107381659.1;Parent=gene-RM610_RS05375;Dbxref=GenBank:WP_107381659.1;Name=WP_107381659.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488441.1;locus_tag=RM610_RS05375;product=o-succinylbenzoate--CoA ligase;protein_id=WP_107381659.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1119281 1119775 . - . ID=gene-RM610_RS05380;Name=RM610_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05380;old_locus_tag=RM610_05400 NZ_JAVRJX010000001.1 Protein Homology CDS 1119281 1119775 . - 0 ID=cds-WP_107359802.1;Parent=gene-RM610_RS05380;Dbxref=GenBank:WP_107359802.1;Name=WP_107359802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=RM610_RS05380;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_107359802.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1119823 1120065 . - . ID=gene-RM610_RS05385;Name=RM610_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05385;old_locus_tag=RM610_05405 NZ_JAVRJX010000001.1 Protein Homology CDS 1119823 1120065 . - 0 ID=cds-WP_037574531.1;Parent=gene-RM610_RS05385;Dbxref=GenBank:WP_037574531.1;Name=WP_037574531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432747.1;locus_tag=RM610_RS05385;product=DUF2273 domain-containing protein;protein_id=WP_037574531.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1120086 1120631 . - . ID=gene-RM610_RS05390;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=RM610_RS05390;old_locus_tag=RM610_05410 NZ_JAVRJX010000001.1 Protein Homology CDS 1120086 1120631 . - 0 ID=cds-WP_037574533.1;Parent=gene-RM610_RS05390;Dbxref=GenBank:WP_037574533.1;Name=WP_037574533.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=RM610_RS05390;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_037574533.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1121030 1121170 . - . ID=gene-RM610_RS05395;Name=RM610_RS05395;end_range=1121170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05395;old_locus_tag=RM610_05415;partial=true;pseudo=true NZ_JAVRJX010000001.1 Protein Homology CDS 1121030 1121170 . - 0 ID=cds-RM610_RS05395;Parent=gene-RM610_RS05395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1121170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274385.1;locus_tag=RM610_RS05395;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1121171 1121248 . - . ID=gene-RM610_RS05400;Name=RM610_RS05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05400;old_locus_tag=RM610_05420;partial=true;pseudo=true;start_range=.,1121171 NZ_JAVRJX010000001.1 Protein Homology CDS 1121171 1121248 . - 0 ID=cds-RM610_RS05400;Parent=gene-RM610_RS05400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500514.1;locus_tag=RM610_RS05400;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1121171;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1121319 1121470 . - . ID=gene-RM610_RS05405;Name=RM610_RS05405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05405;old_locus_tag=RM610_05425;pseudo=true NZ_JAVRJX010000001.1 Protein Homology CDS 1121319 1121470 . - 0 ID=cds-RM610_RS05405;Parent=gene-RM610_RS05405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500515.1;locus_tag=RM610_RS05405;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1121891 1122625 . - . ID=gene-RM610_RS05410;Name=RM610_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05410;old_locus_tag=RM610_05430 NZ_JAVRJX010000001.1 Protein Homology CDS 1121891 1122625 . - 0 ID=cds-WP_311541815.1;Parent=gene-RM610_RS05410;Dbxref=GenBank:WP_311541815.1;Name=WP_311541815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490110.1;locus_tag=RM610_RS05410;product=halocin C8 precursor-like protein;protein_id=WP_311541815.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1122845 1122976 . - . ID=gene-RM610_RS12105;Name=RM610_RS12105;end_range=1122976,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12105;partial=true;pseudo=true NZ_JAVRJX010000001.1 Protein Homology CDS 1122845 1122976 . - 0 ID=cds-RM610_RS12105;Parent=gene-RM610_RS12105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1122976,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=RM610_RS12105;partial=true;product=peptidoglycan recognition protein family protein;pseudo=true;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1123624 1123860 . - . ID=gene-RM610_RS05415;Name=RM610_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05415;old_locus_tag=RM610_05435 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1123624 1123860 . - 0 ID=cds-WP_311541816.1;Parent=gene-RM610_RS05415;Dbxref=GenBank:WP_311541816.1;Name=WP_311541816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05415;product=hypothetical protein;protein_id=WP_311541816.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1123967 1124557 . - . ID=gene-RM610_RS05420;Name=RM610_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05420;old_locus_tag=RM610_05440 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1123967 1124557 . - 0 ID=cds-WP_311541818.1;Parent=gene-RM610_RS05420;Dbxref=GenBank:WP_311541818.1;Name=WP_311541818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05420;product=hypothetical protein;protein_id=WP_311541818.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1124570 1125409 . - . ID=gene-RM610_RS05425;Name=RM610_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05425;old_locus_tag=RM610_05445 NZ_JAVRJX010000001.1 Protein Homology CDS 1124570 1125409 . - 0 ID=cds-WP_311541819.1;Parent=gene-RM610_RS05425;Dbxref=GenBank:WP_311541819.1;Name=WP_311541819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027261.7;locus_tag=RM610_RS05425;product=DUF4747 family protein;protein_id=WP_311541819.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1125641 1127110 . - . ID=gene-RM610_RS05430;Name=RM610_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05430;old_locus_tag=RM610_05450 NZ_JAVRJX010000001.1 Protein Homology CDS 1125641 1127110 . - 0 ID=cds-WP_311541820.1;Parent=gene-RM610_RS05430;Dbxref=GenBank:WP_311541820.1;Name=WP_311541820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219675.1;locus_tag=RM610_RS05430;product=SH3 domain-containing protein;protein_id=WP_311541820.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1127112 1127360 . - . ID=gene-RM610_RS05435;Name=RM610_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05435;old_locus_tag=RM610_05455 NZ_JAVRJX010000001.1 Protein Homology CDS 1127112 1127360 . - 0 ID=cds-WP_311541253.1;Parent=gene-RM610_RS05435;Dbxref=GenBank:WP_311541253.1;Name=WP_311541253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166729.1;locus_tag=RM610_RS05435;product=phage holin;protein_id=WP_311541253.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1127411 1128268 . - . ID=gene-RM610_RS05440;Name=RM610_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05440;old_locus_tag=RM610_05460 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1127411 1128268 . - 0 ID=cds-WP_311541821.1;Parent=gene-RM610_RS05440;Dbxref=GenBank:WP_311541821.1;Name=WP_311541821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05440;product=hypothetical protein;protein_id=WP_311541821.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1128318 1128734 . - . ID=gene-RM610_RS05445;Name=RM610_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05445;old_locus_tag=RM610_05465 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1128318 1128734 . - 0 ID=cds-WP_311541822.1;Parent=gene-RM610_RS05445;Dbxref=GenBank:WP_311541822.1;Name=WP_311541822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05445;product=hypothetical protein;protein_id=WP_311541822.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1128706 1129149 . - . ID=gene-RM610_RS05450;Name=RM610_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05450;old_locus_tag=RM610_05470 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1128706 1129149 . - 0 ID=cds-WP_311541823.1;Parent=gene-RM610_RS05450;Dbxref=GenBank:WP_311541823.1;Name=WP_311541823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05450;product=hypothetical protein;protein_id=WP_311541823.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1129170 1129475 . - . ID=gene-RM610_RS05455;Name=RM610_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05455;old_locus_tag=RM610_05475 NZ_JAVRJX010000001.1 Protein Homology CDS 1129170 1129475 . - 0 ID=cds-WP_311541824.1;Parent=gene-RM610_RS05455;Dbxref=GenBank:WP_311541824.1;Name=WP_311541824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978013.1;locus_tag=RM610_RS05455;product=hypothetical protein;protein_id=WP_311541824.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1129521 1129658 . - . ID=gene-RM610_RS05460;Name=RM610_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05460;old_locus_tag=RM610_05480 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1129521 1129658 . - 0 ID=cds-WP_182474543.1;Parent=gene-RM610_RS05460;Dbxref=GenBank:WP_182474543.1;Name=WP_182474543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05460;product=hypothetical protein;protein_id=WP_182474543.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1132933 1134690 . - . ID=gene-RM610_RS12110;Name=RM610_RS12110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12110;partial=true;pseudo=true;start_range=.,1132933 NZ_JAVRJX010000001.1 Protein Homology CDS 1132933 1134690 . - 0 ID=cds-RM610_RS12110;Parent=gene-RM610_RS12110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582168.1;locus_tag=RM610_RS12110;partial=true;product=phage tail spike protein;pseudo=true;start_range=.,1132933;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1134692 1136182 . - . ID=gene-RM610_RS05470;Name=RM610_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05470;old_locus_tag=RM610_05490 NZ_JAVRJX010000001.1 Protein Homology CDS 1134692 1136182 . - 0 ID=cds-WP_311541826.1;Parent=gene-RM610_RS05470;Dbxref=GenBank:WP_311541826.1;Name=WP_311541826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614130.1;locus_tag=RM610_RS05470;product=phage distal tail protein;protein_id=WP_311541826.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1136182 1140819 . - . ID=gene-RM610_RS05475;Name=RM610_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05475;old_locus_tag=RM610_05495 NZ_JAVRJX010000001.1 Protein Homology CDS 1136182 1140819 . - 0 ID=cds-WP_311541828.1;Parent=gene-RM610_RS05475;Dbxref=GenBank:WP_311541828.1;Name=WP_311541828.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836551.1;locus_tag=RM610_RS05475;product=phage tail tape measure protein;protein_id=WP_311541828.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1140845 1140988 . - . ID=gene-RM610_RS05480;Name=gpGT;gbkey=Gene;gene=gpGT;gene_biotype=protein_coding;locus_tag=RM610_RS05480;old_locus_tag=RM610_05500 NZ_JAVRJX010000001.1 Protein Homology CDS 1140845 1140988 . - 0 ID=cds-WP_172458441.1;Parent=gene-RM610_RS05480;Dbxref=GenBank:WP_172458441.1;Name=WP_172458441.1;gbkey=CDS;gene=gpGT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165869.1;locus_tag=RM610_RS05480;product=phage tail assembly chaperone GT;protein_id=WP_172458441.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1141030 1141476 . - . ID=gene-RM610_RS05485;Name=RM610_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05485;old_locus_tag=RM610_05505 NZ_JAVRJX010000001.1 Protein Homology CDS 1141030 1141476 . - 0 ID=cds-WP_103158805.1;Parent=gene-RM610_RS05485;Dbxref=GenBank:WP_103158805.1;Name=WP_103158805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442601.1;locus_tag=RM610_RS05485;product=hypothetical protein;protein_id=WP_103158805.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1141684 1142301 . - . ID=gene-RM610_RS05490;Name=RM610_RS05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05490;old_locus_tag=RM610_05510;partial=true;pseudo=true;start_range=.,1141684 NZ_JAVRJX010000001.1 Protein Homology CDS 1141684 1142301 . - 0 ID=cds-RM610_RS05490;Parent=gene-RM610_RS05490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165871.1;locus_tag=RM610_RS05490;partial=true;product=major tail protein;pseudo=true;start_range=.,1141684;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1142313 1142675 . - . ID=gene-RM610_RS05495;Name=RM610_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05495;old_locus_tag=RM610_05515 NZ_JAVRJX010000001.1 Protein Homology CDS 1142313 1142675 . - 0 ID=cds-WP_311541829.1;Parent=gene-RM610_RS05495;Dbxref=GenBank:WP_311541829.1;Name=WP_311541829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165872.1;locus_tag=RM610_RS05495;product=DUF806 family protein;protein_id=WP_311541829.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1142672 1143049 . - . ID=gene-RM610_RS05500;Name=RM610_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05500;old_locus_tag=RM610_05520 NZ_JAVRJX010000001.1 Protein Homology CDS 1142672 1143049 . - 0 ID=cds-WP_311541830.1;Parent=gene-RM610_RS05500;Dbxref=GenBank:WP_311541830.1;Name=WP_311541830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501244.1;locus_tag=RM610_RS05500;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_311541830.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1143049 1143381 . - . ID=gene-RM610_RS05505;Name=RM610_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05505;old_locus_tag=RM610_05525 NZ_JAVRJX010000001.1 Protein Homology CDS 1143049 1143381 . - 0 ID=cds-WP_311540203.1;Parent=gene-RM610_RS05505;Dbxref=GenBank:WP_311540203.1;Name=WP_311540203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165874.1;locus_tag=RM610_RS05505;product=phage head completion protein;protein_id=WP_311540203.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1143362 1143661 . - . ID=gene-RM610_RS05510;Name=RM610_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05510;old_locus_tag=RM610_05530 NZ_JAVRJX010000001.1 Protein Homology CDS 1143362 1143661 . - 0 ID=cds-WP_375712508.1;Parent=gene-RM610_RS05510;Dbxref=GenBank:WP_375712508.1;Name=WP_375712508.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177664.1;locus_tag=RM610_RS05510;product=head-tail connector protein;protein_id=WP_375712508.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1143662 1143820 . - . ID=gene-RM610_RS05515;Name=RM610_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05515;old_locus_tag=RM610_05535 NZ_JAVRJX010000001.1 Protein Homology CDS 1143662 1143820 . - 0 ID=cds-WP_172458442.1;Parent=gene-RM610_RS05515;Dbxref=GenBank:WP_172458442.1;Name=WP_172458442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220186.1;locus_tag=RM610_RS05515;product=hypothetical protein;protein_id=WP_172458442.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1143837 1145099 . - . ID=gene-RM610_RS05520;Name=RM610_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05520;old_locus_tag=RM610_05540 NZ_JAVRJX010000001.1 Protein Homology CDS 1143837 1145099 . - 0 ID=cds-WP_311541832.1;Parent=gene-RM610_RS05520;Dbxref=GenBank:WP_311541832.1;Name=WP_311541832.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165877.1;locus_tag=RM610_RS05520;product=phage major capsid protein;protein_id=WP_311541832.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1145170 1145769 . - . ID=gene-RM610_RS05525;Name=RM610_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05525;old_locus_tag=RM610_05545 NZ_JAVRJX010000001.1 Protein Homology CDS 1145170 1145769 . - 0 ID=cds-WP_311541833.1;Parent=gene-RM610_RS05525;Dbxref=GenBank:WP_311541833.1;Name=WP_311541833.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500678.1;locus_tag=RM610_RS05525;product=HK97 family phage prohead protease;protein_id=WP_311541833.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1145762 1147006 . - . ID=gene-RM610_RS05530;Name=RM610_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05530;old_locus_tag=RM610_05550 NZ_JAVRJX010000001.1 Protein Homology CDS 1145762 1147006 . - 0 ID=cds-WP_311541834.1;Parent=gene-RM610_RS05530;Dbxref=GenBank:WP_311541834.1;Name=WP_311541834.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511072.1;locus_tag=RM610_RS05530;product=phage portal protein;protein_id=WP_311541834.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1147222 1148613 . - . ID=gene-RM610_RS05535;Name=RM610_RS05535;end_range=1148613,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05535;old_locus_tag=RM610_05555;partial=true;pseudo=true NZ_JAVRJX010000001.1 Protein Homology CDS 1147222 1148613 . - 0 ID=cds-RM610_RS05535;Parent=gene-RM610_RS05535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004519,GO:0005524,GO:0140657;end_range=1148613,.;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500681.1;locus_tag=RM610_RS05535;partial=true;product=terminase large subunit;pseudo=true;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1148762 1149547 . - . ID=gene-RM610_RS05540;Name=RM610_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05540;old_locus_tag=RM610_05560 NZ_JAVRJX010000001.1 Protein Homology CDS 1148762 1149547 . - 0 ID=cds-WP_311541835.1;Parent=gene-RM610_RS05540;Dbxref=GenBank:WP_311541835.1;Name=WP_311541835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01453.1;locus_tag=RM610_RS05540;product=GIY-YIG nuclease family protein;protein_id=WP_311541835.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1149644 1149802 . + . ID=gene-RM610_RS05545;Name=RM610_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05545;old_locus_tag=RM610_05565 NZ_JAVRJX010000001.1 Protein Homology CDS 1149644 1149802 . + 0 ID=cds-WP_311541836.1;Parent=gene-RM610_RS05545;Dbxref=GenBank:WP_311541836.1;Name=WP_311541836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024064.7;locus_tag=RM610_RS05545;product=ribbon-helix-helix domain-containing protein;protein_id=WP_311541836.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1149868 1150188 . - . ID=gene-RM610_RS05550;Name=RM610_RS05550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05550;old_locus_tag=RM610_05570;partial=true;pseudo=true;start_range=.,1149868 NZ_JAVRJX010000001.1 Protein Homology CDS 1149868 1150188 . - 0 ID=cds-RM610_RS05550;Parent=gene-RM610_RS05550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000133304.1;locus_tag=RM610_RS05550;partial=true;product=terminase large subunit domain-containing protein;pseudo=true;start_range=.,1149868;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1150188 1150658 . - . ID=gene-RM610_RS05555;Name=RM610_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05555;old_locus_tag=RM610_05575 NZ_JAVRJX010000001.1 Protein Homology CDS 1150188 1150658 . - 0 ID=cds-WP_311541838.1;Parent=gene-RM610_RS05555;Dbxref=GenBank:WP_311541838.1;Name=WP_311541838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919024.1;locus_tag=RM610_RS05555;product=phage terminase small subunit P27 family;protein_id=WP_311541838.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1150739 1151116 . - . ID=gene-RM610_RS05560;Name=RM610_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05560;old_locus_tag=RM610_05580 NZ_JAVRJX010000001.1 Protein Homology CDS 1150739 1151116 . - 0 ID=cds-WP_311541839.1;Parent=gene-RM610_RS05560;Dbxref=GenBank:WP_311541839.1;Name=WP_311541839.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955175.1;locus_tag=RM610_RS05560;product=HNH endonuclease;protein_id=WP_311541839.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1151121 1151483 . - . ID=gene-RM610_RS05565;Name=RM610_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05565;old_locus_tag=RM610_05585 NZ_JAVRJX010000001.1 Protein Homology CDS 1151121 1151483 . - 0 ID=cds-WP_311541840.1;Parent=gene-RM610_RS05565;Dbxref=GenBank:WP_311541840.1;Name=WP_311541840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220180.1;locus_tag=RM610_RS05565;product=hypothetical protein;protein_id=WP_311541840.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1151732 1152178 . - . ID=gene-RM610_RS05570;Name=RM610_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05570;old_locus_tag=RM610_05590 NZ_JAVRJX010000001.1 Protein Homology CDS 1151732 1152178 . - 0 ID=cds-WP_167694253.1;Parent=gene-RM610_RS05570;Dbxref=GenBank:WP_167694253.1;Name=WP_167694253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469778.1;locus_tag=RM610_RS05570;product=DUF722 domain-containing protein;protein_id=WP_167694253.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1152189 1152356 . - . ID=gene-RM610_RS12130;Name=RM610_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12130 NZ_JAVRJX010000001.1 Protein Homology CDS 1152189 1152356 . - 0 ID=cds-WP_511567715.1;Parent=gene-RM610_RS12130;Dbxref=GenBank:WP_511567715.1;Name=WP_511567715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019082.9;locus_tag=RM610_RS12130;product=DUF1514 family protein;protein_id=WP_511567715.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1152493 1152984 . - . ID=gene-RM610_RS05575;Name=RM610_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05575;old_locus_tag=RM610_05595 NZ_JAVRJX010000001.1 Protein Homology CDS 1152493 1152984 . - 0 ID=cds-WP_311541841.1;Parent=gene-RM610_RS05575;Dbxref=GenBank:WP_311541841.1;Name=WP_311541841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469728.1;locus_tag=RM610_RS05575;product=dUTP diphosphatase;protein_id=WP_311541841.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1152985 1153344 . - . ID=gene-RM610_RS05580;Name=RM610_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05580;old_locus_tag=RM610_05600 NZ_JAVRJX010000001.1 Protein Homology CDS 1152985 1153344 . - 0 ID=cds-WP_311541842.1;Parent=gene-RM610_RS05580;Dbxref=GenBank:WP_311541842.1;Name=WP_311541842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365145.1;locus_tag=RM610_RS05580;product=thermonuclease family protein;protein_id=WP_311541842.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1153331 1153537 . - . ID=gene-RM610_RS05585;Name=RM610_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05585;old_locus_tag=RM610_05605 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1153331 1153537 . - 0 ID=cds-WP_311541843.1;Parent=gene-RM610_RS05585;Dbxref=GenBank:WP_311541843.1;Name=WP_311541843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05585;product=hypothetical protein;protein_id=WP_311541843.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1153534 1153932 . - . ID=gene-RM610_RS05590;Name=RM610_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05590;old_locus_tag=RM610_05610 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1153534 1153932 . - 0 ID=cds-WP_311541845.1;Parent=gene-RM610_RS05590;Dbxref=GenBank:WP_311541845.1;Name=WP_311541845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05590;product=hypothetical protein;protein_id=WP_311541845.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1153919 1154116 . - . ID=gene-RM610_RS05595;Name=RM610_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05595;old_locus_tag=RM610_05615 NZ_JAVRJX010000001.1 Protein Homology CDS 1153919 1154116 . - 0 ID=cds-WP_233650189.1;Parent=gene-RM610_RS05595;Dbxref=GenBank:WP_233650189.1;Name=WP_233650189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636911.1;locus_tag=RM610_RS05595;product=hypothetical protein;protein_id=WP_233650189.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1154376 1154867 . - . ID=gene-RM610_RS05600;Name=RM610_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05600;old_locus_tag=RM610_05625 NZ_JAVRJX010000001.1 Protein Homology CDS 1154376 1154867 . - 0 ID=cds-WP_311541846.1;Parent=gene-RM610_RS05600;Dbxref=GenBank:WP_311541846.1;Name=WP_311541846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469776.1;locus_tag=RM610_RS05600;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_311541846.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1154864 1155091 . - . ID=gene-RM610_RS05605;Name=RM610_RS05605;end_range=1155091,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05605;old_locus_tag=RM610_05630;partial=true;pseudo=true NZ_JAVRJX010000001.1 Protein Homology CDS 1154864 1155091 . - 0 ID=cds-RM610_RS05605;Parent=gene-RM610_RS05605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1155091,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505177.1;locus_tag=RM610_RS05605;partial=true;product=DUF3310 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1155087 1155278 . - . ID=gene-RM610_RS05610;Name=RM610_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05610;old_locus_tag=RM610_05635 NZ_JAVRJX010000001.1 Protein Homology CDS 1155087 1155278 . - 0 ID=cds-WP_311541847.1;Parent=gene-RM610_RS05610;Dbxref=GenBank:WP_311541847.1;Name=WP_311541847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978225.1;locus_tag=RM610_RS05610;product=hypothetical protein;protein_id=WP_311541847.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1155275 1155694 . - . ID=gene-RM610_RS05615;Name=RM610_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05615;old_locus_tag=RM610_05640 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1155275 1155694 . - 0 ID=cds-WP_311541848.1;Parent=gene-RM610_RS05615;Dbxref=GenBank:WP_311541848.1;Name=WP_311541848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05615;product=hypothetical protein;protein_id=WP_311541848.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1155696 1156004 . - . ID=gene-RM610_RS05620;Name=RM610_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05620;old_locus_tag=RM610_05645 NZ_JAVRJX010000001.1 Protein Homology CDS 1155696 1156004 . - 0 ID=cds-WP_311541849.1;Parent=gene-RM610_RS05620;Dbxref=GenBank:WP_311541849.1;Name=WP_311541849.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436449.1;locus_tag=RM610_RS05620;product=VRR-NUC domain-containing protein;protein_id=WP_311541849.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1156290 1158608 . - . ID=gene-RM610_RS05625;Name=RM610_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05625;old_locus_tag=RM610_05650 NZ_JAVRJX010000001.1 Protein Homology CDS 1156290 1158608 . - 0 ID=cds-WP_311541851.1;Parent=gene-RM610_RS05625;Dbxref=GenBank:WP_311541851.1;Name=WP_311541851.1;Ontology_term=GO:0006260,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169757.1;locus_tag=RM610_RS05625;product=phage/plasmid primase%2C P4 family;protein_id=WP_311541851.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1158639 1159136 . - . ID=gene-RM610_RS05630;Name=RM610_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05630;old_locus_tag=RM610_05655 NZ_JAVRJX010000001.1 Protein Homology CDS 1158639 1159136 . - 0 ID=cds-WP_107381595.1;Parent=gene-RM610_RS05630;Dbxref=GenBank:WP_107381595.1;Name=WP_107381595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436468.1;locus_tag=RM610_RS05630;product=DUF669 domain-containing protein;protein_id=WP_107381595.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1159153 1160487 . - . ID=gene-RM610_RS05635;Name=RM610_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05635;old_locus_tag=RM610_05660 NZ_JAVRJX010000001.1 Protein Homology CDS 1159153 1160487 . - 0 ID=cds-WP_311541852.1;Parent=gene-RM610_RS05635;Dbxref=GenBank:WP_311541852.1;Name=WP_311541852.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469790.1;locus_tag=RM610_RS05635;product=DEAD/DEAH box helicase;protein_id=WP_311541852.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1160471 1161181 . - . ID=gene-RM610_RS05640;Name=RM610_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05640;old_locus_tag=RM610_05665 NZ_JAVRJX010000001.1 Protein Homology CDS 1160471 1161181 . - 0 ID=cds-WP_311541853.1;Parent=gene-RM610_RS05640;Dbxref=GenBank:WP_311541853.1;Name=WP_311541853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469773.1;locus_tag=RM610_RS05640;product=AAA family ATPase;protein_id=WP_311541853.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1161181 1161666 . - . ID=gene-RM610_RS05645;Name=RM610_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05645;old_locus_tag=RM610_05670 NZ_JAVRJX010000001.1 Protein Homology CDS 1161181 1161666 . - 0 ID=cds-WP_311541854.1;Parent=gene-RM610_RS05645;Dbxref=GenBank:WP_311541854.1;Name=WP_311541854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015977899.1;locus_tag=RM610_RS05645;product=siphovirus Gp157 family protein;protein_id=WP_311541854.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1161659 1161838 . - . ID=gene-RM610_RS05650;Name=RM610_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05650;old_locus_tag=RM610_05675 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1161659 1161838 . - 0 ID=cds-WP_311541855.1;Parent=gene-RM610_RS05650;Dbxref=GenBank:WP_311541855.1;Name=WP_311541855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05650;product=hypothetical protein;protein_id=WP_311541855.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1161916 1162089 . - . ID=gene-RM610_RS05655;Name=RM610_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05655;old_locus_tag=RM610_05680 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1161916 1162089 . - 0 ID=cds-WP_311541856.1;Parent=gene-RM610_RS05655;Dbxref=GenBank:WP_311541856.1;Name=WP_311541856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05655;product=hypothetical protein;protein_id=WP_311541856.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1162083 1162295 . - . ID=gene-RM610_RS05660;Name=RM610_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05660;old_locus_tag=RM610_05685 NZ_JAVRJX010000001.1 Protein Homology CDS 1162083 1162295 . - 0 ID=cds-WP_311541857.1;Parent=gene-RM610_RS05660;Dbxref=GenBank:WP_311541857.1;Name=WP_311541857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468742.1;locus_tag=RM610_RS05660;product=hypothetical protein;protein_id=WP_311541857.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1162448 1163065 . + . ID=gene-RM610_RS05665;Name=RM610_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05665;old_locus_tag=RM610_05690 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1162448 1163065 . + 0 ID=cds-WP_311541858.1;Parent=gene-RM610_RS05665;Dbxref=GenBank:WP_311541858.1;Name=WP_311541858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05665;product=hypothetical protein;protein_id=WP_311541858.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1163337 1163546 . - . ID=gene-RM610_RS05670;Name=RM610_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05670;old_locus_tag=RM610_05695 NZ_JAVRJX010000001.1 Protein Homology CDS 1163337 1163546 . - 0 ID=cds-WP_107381602.1;Parent=gene-RM610_RS05670;Dbxref=GenBank:WP_107381602.1;Name=WP_107381602.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114715.1;locus_tag=RM610_RS05670;product=helix-turn-helix transcriptional regulator;protein_id=WP_107381602.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1163710 1164036 . + . ID=gene-RM610_RS05675;Name=RM610_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05675;old_locus_tag=RM610_05700 NZ_JAVRJX010000001.1 Protein Homology CDS 1163710 1164036 . + 0 ID=cds-WP_167694227.1;Parent=gene-RM610_RS05675;Dbxref=GenBank:WP_167694227.1;Name=WP_167694227.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429766.1;locus_tag=RM610_RS05675;product=helix-turn-helix domain-containing protein;protein_id=WP_167694227.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1164066 1164518 . + . ID=gene-RM610_RS05680;Name=RM610_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05680;old_locus_tag=RM610_05705 NZ_JAVRJX010000001.1 Protein Homology CDS 1164066 1164518 . + 0 ID=cds-WP_311541859.1;Parent=gene-RM610_RS05680;Dbxref=GenBank:WP_311541859.1;Name=WP_311541859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220396.1;locus_tag=RM610_RS05680;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_311541859.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1164530 1165048 . + . ID=gene-RM610_RS05685;Name=RM610_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05685;old_locus_tag=RM610_05710 NZ_JAVRJX010000001.1 Protein Homology CDS 1164530 1165048 . + 0 ID=cds-WP_311541860.1;Parent=gene-RM610_RS05685;Dbxref=GenBank:WP_311541860.1;Name=WP_311541860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167772.1;locus_tag=RM610_RS05685;product=hypothetical protein;protein_id=WP_311541860.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1165109 1166158 . + . ID=gene-RM610_RS05690;Name=RM610_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05690;old_locus_tag=RM610_05715 NZ_JAVRJX010000001.1 Protein Homology CDS 1165109 1166158 . + 0 ID=cds-WP_311541862.1;Parent=gene-RM610_RS05690;Dbxref=GenBank:WP_311541862.1;Name=WP_311541862.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456358.1;locus_tag=RM610_RS05690;product=tyrosine-type recombinase/integrase;protein_id=WP_311541862.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1166211 1166299 . - . ID=gene-RM610_RS05695;Name=RM610_RS05695;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05695;old_locus_tag=RM610_05720 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166211 1166299 . - . ID=rna-RM610_RS05695;Parent=gene-RM610_RS05695;anticodon=(pos:complement(1166262..1166264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05695;product=tRNA-Ser NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166211 1166299 . - . ID=exon-RM610_RS05695-1;Parent=rna-RM610_RS05695;anticodon=(pos:complement(1166262..1166264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05695;product=tRNA-Ser NZ_JAVRJX010000001.1 RefSeq gene 1166348 1166419 . - . ID=gene-RM610_RS05700;Name=RM610_RS05700;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05700;old_locus_tag=RM610_05725 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166348 1166419 . - . ID=rna-RM610_RS05700;Parent=gene-RM610_RS05700;anticodon=(pos:complement(1166384..1166386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05700;product=tRNA-Glu NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166348 1166419 . - . ID=exon-RM610_RS05700-1;Parent=rna-RM610_RS05700;anticodon=(pos:complement(1166384..1166386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05700;product=tRNA-Glu NZ_JAVRJX010000001.1 RefSeq gene 1166421 1166495 . - . ID=gene-RM610_RS05705;Name=RM610_RS05705;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05705;old_locus_tag=RM610_05730 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166421 1166495 . - . ID=rna-RM610_RS05705;Parent=gene-RM610_RS05705;anticodon=(pos:complement(1166461..1166463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05705;product=tRNA-Asn NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166421 1166495 . - . ID=exon-RM610_RS05705-1;Parent=rna-RM610_RS05705;anticodon=(pos:complement(1166461..1166463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05705;product=tRNA-Asn NZ_JAVRJX010000001.1 RefSeq gene 1166505 1166578 . - . ID=gene-RM610_RS05710;Name=RM610_RS05710;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05710;old_locus_tag=RM610_05735 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166505 1166578 . - . ID=rna-RM610_RS05710;Parent=gene-RM610_RS05710;anticodon=(pos:complement(1166544..1166546));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05710;product=tRNA-Gly NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166505 1166578 . - . ID=exon-RM610_RS05710-1;Parent=rna-RM610_RS05710;anticodon=(pos:complement(1166544..1166546));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05710;product=tRNA-Gly NZ_JAVRJX010000001.1 RefSeq gene 1166592 1166664 . - . ID=gene-RM610_RS05715;Name=RM610_RS05715;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05715;old_locus_tag=RM610_05740 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166592 1166664 . - . ID=rna-RM610_RS05715;Parent=gene-RM610_RS05715;anticodon=(pos:complement(1166629..1166631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05715;product=tRNA-His NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166592 1166664 . - . ID=exon-RM610_RS05715-1;Parent=rna-RM610_RS05715;anticodon=(pos:complement(1166629..1166631));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05715;product=tRNA-His NZ_JAVRJX010000001.1 RefSeq gene 1166677 1166749 . - . ID=gene-RM610_RS05720;Name=RM610_RS05720;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05720;old_locus_tag=RM610_05745 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166677 1166749 . - . ID=rna-RM610_RS05720;Parent=gene-RM610_RS05720;anticodon=(pos:complement(1166714..1166716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05720;product=tRNA-Phe NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166677 1166749 . - . ID=exon-RM610_RS05720-1;Parent=rna-RM610_RS05720;anticodon=(pos:complement(1166714..1166716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05720;product=tRNA-Phe NZ_JAVRJX010000001.1 RefSeq gene 1166760 1166836 . - . ID=gene-RM610_RS05725;Name=RM610_RS05725;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05725;old_locus_tag=RM610_05750 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166760 1166836 . - . ID=rna-RM610_RS05725;Parent=gene-RM610_RS05725;anticodon=(pos:complement(1166800..1166802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05725;product=tRNA-Asp NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166760 1166836 . - . ID=exon-RM610_RS05725-1;Parent=rna-RM610_RS05725;anticodon=(pos:complement(1166800..1166802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05725;product=tRNA-Asp NZ_JAVRJX010000001.1 RefSeq gene 1166848 1166921 . - . ID=gene-RM610_RS05730;Name=RM610_RS05730;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05730;old_locus_tag=RM610_05755 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1166848 1166921 . - . ID=rna-RM610_RS05730;Parent=gene-RM610_RS05730;anticodon=(pos:complement(1166885..1166887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05730;product=tRNA-Met NZ_JAVRJX010000001.1 tRNAscan-SE exon 1166848 1166921 . - . ID=exon-RM610_RS05730-1;Parent=rna-RM610_RS05730;anticodon=(pos:complement(1166885..1166887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05730;product=tRNA-Met NZ_JAVRJX010000001.1 RefSeq gene 1167019 1167093 . - . ID=gene-RM610_RS05735;Name=RM610_RS05735;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS05735;old_locus_tag=RM610_05760 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1167019 1167093 . - . ID=rna-RM610_RS05735;Parent=gene-RM610_RS05735;anticodon=(pos:complement(1167058..1167060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05735;product=tRNA-Glu NZ_JAVRJX010000001.1 tRNAscan-SE exon 1167019 1167093 . - . ID=exon-RM610_RS05735-1;Parent=rna-RM610_RS05735;anticodon=(pos:complement(1167058..1167060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS05735;product=tRNA-Glu NZ_JAVRJX010000001.1 RefSeq gene 1167261 1167815 . - . ID=gene-RM610_RS05740;Name=RM610_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05740;old_locus_tag=RM610_05765 NZ_JAVRJX010000001.1 Protein Homology CDS 1167261 1167815 . - 0 ID=cds-WP_107381716.1;Parent=gene-RM610_RS05740;Dbxref=GenBank:WP_107381716.1;Name=WP_107381716.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=RM610_RS05740;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_107381716.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1168140 1169537 . - . ID=gene-RM610_RS05745;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=RM610_RS05745;old_locus_tag=RM610_05770 NZ_JAVRJX010000001.1 Protein Homology CDS 1168140 1169537 . - 0 ID=cds-WP_107376123.1;Parent=gene-RM610_RS05745;Dbxref=GenBank:WP_107376123.1;Name=WP_107376123.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=protoporphyrinogen oxidase activity%2C oxygen as acceptor|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=RM610_RS05745;product=protoporphyrinogen oxidase;protein_id=WP_107376123.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1169543 1170475 . - . ID=gene-RM610_RS05750;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=RM610_RS05750;old_locus_tag=RM610_05775 NZ_JAVRJX010000001.1 Protein Homology CDS 1169543 1170475 . - 0 ID=cds-WP_107359787.1;Parent=gene-RM610_RS05750;Dbxref=GenBank:WP_107359787.1;Name=WP_107359787.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=RM610_RS05750;product=ferrochelatase;protein_id=WP_107359787.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1170497 1171540 . - . ID=gene-RM610_RS05755;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=RM610_RS05755;old_locus_tag=RM610_05780 NZ_JAVRJX010000001.1 Protein Homology CDS 1170497 1171540 . - 0 ID=cds-WP_105965356.1;Parent=gene-RM610_RS05755;Dbxref=GenBank:WP_105965356.1;Name=WP_105965356.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164994.1;locus_tag=RM610_RS05755;product=uroporphyrinogen decarboxylase;protein_id=WP_105965356.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1171737 1172273 . + . ID=gene-RM610_RS05760;Name=RM610_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05760;old_locus_tag=RM610_05785 NZ_JAVRJX010000001.1 Protein Homology CDS 1171737 1172273 . + 0 ID=cds-WP_105965355.1;Parent=gene-RM610_RS05760;Dbxref=GenBank:WP_105965355.1;Name=WP_105965355.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425440.1;locus_tag=RM610_RS05760;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_105965355.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1172530 1173744 . - . ID=gene-RM610_RS05765;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=RM610_RS05765;old_locus_tag=RM610_05790 NZ_JAVRJX010000001.1 Protein Homology CDS 1172530 1173744 . - 0 ID=cds-WP_311541863.1;Parent=gene-RM610_RS05765;Dbxref=GenBank:WP_311541863.1;Name=WP_311541863.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=RM610_RS05765;product=ABC transporter permease EcsB;protein_id=WP_311541863.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1173741 1174478 . - . ID=gene-RM610_RS05770;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=RM610_RS05770;old_locus_tag=RM610_05795 NZ_JAVRJX010000001.1 Protein Homology CDS 1173741 1174478 . - 0 ID=cds-WP_107370153.1;Parent=gene-RM610_RS05770;Dbxref=GenBank:WP_107370153.1;Name=WP_107370153.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425442.1;locus_tag=RM610_RS05770;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_107370153.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1174607 1175032 . + . ID=gene-RM610_RS05775;Name=RM610_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05775;old_locus_tag=RM610_05800 NZ_JAVRJX010000001.1 Protein Homology CDS 1174607 1175032 . + 0 ID=cds-WP_107359783.1;Parent=gene-RM610_RS05775;Dbxref=GenBank:WP_107359783.1;Name=WP_107359783.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=RM610_RS05775;product=HIT family protein;protein_id=WP_107359783.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1175115 1175471 . + . ID=gene-RM610_RS05780;Name=RM610_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05780;old_locus_tag=RM610_05805 NZ_JAVRJX010000001.1 Protein Homology CDS 1175115 1175471 . + 0 ID=cds-WP_037574561.1;Parent=gene-RM610_RS05780;Dbxref=GenBank:WP_037574561.1;Name=WP_037574561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=RM610_RS05780;product=YtxH domain-containing protein;protein_id=WP_037574561.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1175571 1176101 . + . ID=gene-RM610_RS05785;Name=RM610_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05785;old_locus_tag=RM610_05810 NZ_JAVRJX010000001.1 Protein Homology CDS 1175571 1176101 . + 0 ID=cds-WP_107376121.1;Parent=gene-RM610_RS05785;Dbxref=GenBank:WP_107376121.1;Name=WP_107376121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=RM610_RS05785;product=HTH-type transcriptional regulator Hpr;protein_id=WP_107376121.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1176154 1176693 . + . ID=gene-RM610_RS05790;Name=RM610_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05790;old_locus_tag=RM610_05815 NZ_JAVRJX010000001.1 Protein Homology CDS 1176154 1176693 . + 0 ID=cds-WP_107370152.1;Parent=gene-RM610_RS05790;Dbxref=GenBank:WP_107370152.1;Name=WP_107370152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466819.1;locus_tag=RM610_RS05790;product=DUF3267 domain-containing protein;protein_id=WP_107370152.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1176903 1177877 . + . ID=gene-RM610_RS05795;Name=RM610_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05795;old_locus_tag=RM610_05820 NZ_JAVRJX010000001.1 Protein Homology CDS 1176903 1177877 . + 0 ID=cds-WP_311541864.1;Parent=gene-RM610_RS05795;Dbxref=GenBank:WP_311541864.1;Name=WP_311541864.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425447.1;locus_tag=RM610_RS05795;product=foldase protein PrsA;protein_id=WP_311541864.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1178001 1178942 . - . ID=gene-RM610_RS05800;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=RM610_RS05800;old_locus_tag=RM610_05825 NZ_JAVRJX010000001.1 Protein Homology CDS 1178001 1178942 . - 0 ID=cds-WP_107359779.1;Parent=gene-RM610_RS05800;Dbxref=GenBank:WP_107359779.1;Name=WP_107359779.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=RM610_RS05800;product=3'-5' exoribonuclease YhaM;protein_id=WP_107359779.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1178961 1181888 . - . ID=gene-RM610_RS05805;Name=RM610_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05805;old_locus_tag=RM610_05830 NZ_JAVRJX010000001.1 Protein Homology CDS 1178961 1181888 . - 0 ID=cds-WP_107376119.1;Parent=gene-RM610_RS05805;Dbxref=GenBank:WP_107376119.1;Name=WP_107376119.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=RM610_RS05805;product=AAA family ATPase;protein_id=WP_107376119.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1181892 1183079 . - . ID=gene-RM610_RS05810;Name=RM610_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05810;old_locus_tag=RM610_05835 NZ_JAVRJX010000001.1 Protein Homology CDS 1181892 1183079 . - 0 ID=cds-WP_311541866.1;Parent=gene-RM610_RS05810;Dbxref=GenBank:WP_311541866.1;Name=WP_311541866.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=RM610_RS05810;product=metallophosphoesterase family protein;protein_id=WP_311541866.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1183300 1183644 . - . ID=gene-RM610_RS05815;Name=RM610_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05815;old_locus_tag=RM610_05840 NZ_JAVRJX010000001.1 Protein Homology CDS 1183300 1183644 . - 0 ID=cds-WP_037574578.1;Parent=gene-RM610_RS05815;Dbxref=GenBank:WP_037574578.1;Name=WP_037574578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=RM610_RS05815;product=YlbF/YmcA family competence regulator;protein_id=WP_037574578.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1183731 1184861 . - . ID=gene-RM610_RS05820;Name=RM610_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05820;old_locus_tag=RM610_05845 NZ_JAVRJX010000001.1 Protein Homology CDS 1183731 1184861 . - 0 ID=cds-WP_107376117.1;Parent=gene-RM610_RS05820;Dbxref=GenBank:WP_107376117.1;Name=WP_107376117.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275417.1;locus_tag=RM610_RS05820;product=DUF445 domain-containing protein;protein_id=WP_107376117.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1185019 1185483 . - . ID=gene-RM610_RS05825;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=RM610_RS05825;old_locus_tag=RM610_05850 NZ_JAVRJX010000001.1 Protein Homology CDS 1185019 1185483 . - 0 ID=cds-WP_037574584.1;Parent=gene-RM610_RS05825;Dbxref=GenBank:WP_037574584.1;Name=WP_037574584.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=RM610_RS05825;product=XRE family transcriptional regulator XdrA;protein_id=WP_037574584.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1185873 1186118 . + . ID=gene-RM610_RS05830;Name=RM610_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05830;old_locus_tag=RM610_05855 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1185873 1186118 . + 0 ID=cds-WP_103159566.1;Parent=gene-RM610_RS05830;Dbxref=GenBank:WP_103159566.1;Name=WP_103159566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05830;product=hypothetical protein;protein_id=WP_103159566.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1186243 1186404 . - . ID=gene-RM610_RS05835;Name=RM610_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05835;old_locus_tag=RM610_05860 NZ_JAVRJX010000001.1 Protein Homology CDS 1186243 1186404 . - 0 ID=cds-WP_311541867.1;Parent=gene-RM610_RS05835;Dbxref=GenBank:WP_311541867.1;Name=WP_311541867.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=RM610_RS05835;product=DUF6007 family protein;protein_id=WP_311541867.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1186810 1187277 . - . ID=gene-RM610_RS05840;Name=RM610_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05840;old_locus_tag=RM610_05865 NZ_JAVRJX010000001.1 Protein Homology CDS 1186810 1187277 . - 0 ID=cds-WP_107519371.1;Parent=gene-RM610_RS05840;Dbxref=GenBank:WP_107519371.1;Name=WP_107519371.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: protein motif:HMM:NF024853.7;locus_tag=RM610_RS05840;product=DsbA family protein;protein_id=WP_107519371.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1188123 1188461 . - . ID=gene-RM610_RS05850;Name=RM610_RS05850;end_range=1188461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS05850;old_locus_tag=RM610_05875;partial=true;pseudo=true NZ_JAVRJX010000001.1 Protein Homology CDS 1188123 1188461 . - 0 ID=cds-RM610_RS05850;Parent=gene-RM610_RS05850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015293,GO:0022857,GO:0016020;end_range=1188461,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=RM610_RS05850;partial=true;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1188522 1190072 . - . ID=gene-RM610_RS05855;Name=RM610_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05855;old_locus_tag=RM610_05880 NZ_JAVRJX010000001.1 Protein Homology CDS 1188522 1190072 . - 0 ID=cds-WP_311541868.1;Parent=gene-RM610_RS05855;Dbxref=GenBank:WP_311541868.1;Name=WP_311541868.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012464.7;locus_tag=RM610_RS05855;product=recombinase family protein;protein_id=WP_311541868.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1190065 1190634 . - . ID=gene-RM610_RS05860;Name=RM610_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05860;old_locus_tag=RM610_05885 NZ_JAVRJX010000001.1 Protein Homology CDS 1190065 1190634 . - 0 ID=cds-WP_311541869.1;Parent=gene-RM610_RS05860;Dbxref=GenBank:WP_311541869.1;Name=WP_311541869.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012473.7;locus_tag=RM610_RS05860;product=SANT/Myb-like DNA-binding domain-containing protein;protein_id=WP_311541869.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1190883 1191470 . - . ID=gene-RM610_RS05865;Name=RM610_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05865;old_locus_tag=RM610_05890 NZ_JAVRJX010000001.1 Protein Homology CDS 1190883 1191470 . - 0 ID=cds-WP_311541870.1;Parent=gene-RM610_RS05865;Dbxref=GenBank:WP_311541870.1;Name=WP_311541870.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959215.1;locus_tag=RM610_RS05865;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_311541870.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1191463 1191813 . - . ID=gene-RM610_RS05870;Name=RM610_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05870;old_locus_tag=RM610_05895 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1191463 1191813 . - 0 ID=cds-WP_311541871.1;Parent=gene-RM610_RS05870;Dbxref=GenBank:WP_311541871.1;Name=WP_311541871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05870;product=hypothetical protein;protein_id=WP_311541871.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1191819 1192532 . - . ID=gene-RM610_RS05875;Name=RM610_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05875;old_locus_tag=RM610_05900 NZ_JAVRJX010000001.1 Protein Homology CDS 1191819 1192532 . - 0 ID=cds-WP_311541872.1;Parent=gene-RM610_RS05875;Dbxref=GenBank:WP_311541872.1;Name=WP_311541872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487602.1;locus_tag=RM610_RS05875;product=pyrophosphohydrolase domain-containing protein;protein_id=WP_311541872.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1192548 1192781 . - . ID=gene-RM610_RS05880;Name=RM610_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05880;old_locus_tag=RM610_05905 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1192548 1192781 . - 0 ID=cds-WP_311541873.1;Parent=gene-RM610_RS05880;Dbxref=GenBank:WP_311541873.1;Name=WP_311541873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05880;product=hypothetical protein;protein_id=WP_311541873.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1192799 1193041 . - . ID=gene-RM610_RS05885;Name=RM610_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05885;old_locus_tag=RM610_05910 NZ_JAVRJX010000001.1 Protein Homology CDS 1192799 1193041 . - 0 ID=cds-WP_311541874.1;Parent=gene-RM610_RS05885;Dbxref=GenBank:WP_311541874.1;Name=WP_311541874.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504507.1;locus_tag=RM610_RS05885;product=thioredoxin family protein;protein_id=WP_311541874.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1193044 1193688 . - . ID=gene-RM610_RS05890;Name=RM610_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05890;old_locus_tag=RM610_05915 NZ_JAVRJX010000001.1 Protein Homology CDS 1193044 1193688 . - 0 ID=cds-WP_311541876.1;Parent=gene-RM610_RS05890;Dbxref=GenBank:WP_311541876.1;Name=WP_311541876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504508.1;locus_tag=RM610_RS05890;product=AAA family ATPase;protein_id=WP_311541876.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1193721 1194743 . - . ID=gene-RM610_RS05895;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=RM610_RS05895;old_locus_tag=RM610_05920 NZ_JAVRJX010000001.1 Protein Homology CDS 1193721 1194743 . - 0 ID=cds-WP_311541878.1;Parent=gene-RM610_RS05895;Dbxref=GenBank:WP_311541878.1;Name=WP_311541878.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011247951.1;locus_tag=RM610_RS05895;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_311541878.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1194731 1196821 . - . ID=gene-RM610_RS05900;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=RM610_RS05900;old_locus_tag=RM610_05925 NZ_JAVRJX010000001.1 Protein Homology CDS 1194731 1196821 . - 0 ID=cds-WP_311541879.1;Parent=gene-RM610_RS05900;Dbxref=GenBank:WP_311541879.1;Name=WP_311541879.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014664065.1;locus_tag=RM610_RS05900;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_311541879.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1196833 1197219 . - . ID=gene-RM610_RS05905;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=RM610_RS05905;old_locus_tag=RM610_05930 NZ_JAVRJX010000001.1 Protein Homology CDS 1196833 1197219 . - 0 ID=cds-WP_311541880.1;Parent=gene-RM610_RS05905;Dbxref=GenBank:WP_311541880.1;Name=WP_311541880.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086002.1;locus_tag=RM610_RS05905;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_311541880.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1197200 1197361 . - . ID=gene-RM610_RS05910;Name=RM610_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05910;old_locus_tag=RM610_05935 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1197200 1197361 . - 0 ID=cds-WP_311541881.1;Parent=gene-RM610_RS05910;Dbxref=GenBank:WP_311541881.1;Name=WP_311541881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05910;product=hypothetical protein;protein_id=WP_311541881.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1197405 1198103 . - . ID=gene-RM610_RS05915;Name=RM610_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05915;old_locus_tag=RM610_05940 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1197405 1198103 . - 0 ID=cds-WP_311541882.1;Parent=gene-RM610_RS05915;Dbxref=GenBank:WP_311541882.1;Name=WP_311541882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05915;product=hypothetical protein;protein_id=WP_311541882.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1198115 1198624 . - . ID=gene-RM610_RS05920;Name=RM610_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05920;old_locus_tag=RM610_05945 NZ_JAVRJX010000001.1 Protein Homology CDS 1198115 1198624 . - 0 ID=cds-WP_311541884.1;Parent=gene-RM610_RS05920;Dbxref=GenBank:WP_311541884.1;Name=WP_311541884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017386.7;locus_tag=RM610_RS05920;product=siphovirus Gp157 family protein;protein_id=WP_311541884.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1198710 1199315 . - . ID=gene-RM610_RS05925;Name=RM610_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05925;old_locus_tag=RM610_05950 NZ_JAVRJX010000001.1 Protein Homology CDS 1198710 1199315 . - 0 ID=cds-WP_311541886.1;Parent=gene-RM610_RS05925;Dbxref=GenBank:WP_311541886.1;Name=WP_311541886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504517.1;locus_tag=RM610_RS05925;product=PQ-loop domain-containing transporter;protein_id=WP_311541886.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1199315 1200088 . - . ID=gene-RM610_RS05930;Name=RM610_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05930;old_locus_tag=RM610_05955 NZ_JAVRJX010000001.1 Protein Homology CDS 1199315 1200088 . - 0 ID=cds-WP_311541887.1;Parent=gene-RM610_RS05930;Dbxref=GenBank:WP_311541887.1;Name=WP_311541887.1;Ontology_term=GO:0005743,GO:0016020,GO:0035632;gbkey=CDS;go_component=mitochondrial inner membrane|0005743||IEA,membrane|0016020||IEA,mitochondrial prohibitin complex|0035632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063834.1;locus_tag=RM610_RS05930;product=prohibitin family protein;protein_id=WP_311541887.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1200085 1200396 . - . ID=gene-RM610_RS05935;Name=RM610_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05935;old_locus_tag=RM610_05960 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1200085 1200396 . - 0 ID=cds-WP_311541888.1;Parent=gene-RM610_RS05935;Dbxref=GenBank:WP_311541888.1;Name=WP_311541888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05935;product=hypothetical protein;protein_id=WP_311541888.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1200421 1200702 . - . ID=gene-RM610_RS05940;Name=RM610_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05940;old_locus_tag=RM610_05965 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1200421 1200702 . - 0 ID=cds-WP_311541889.1;Parent=gene-RM610_RS05940;Dbxref=GenBank:WP_311541889.1;Name=WP_311541889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05940;product=hypothetical protein;protein_id=WP_311541889.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1200739 1201596 . - . ID=gene-RM610_RS05945;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=RM610_RS05945;old_locus_tag=RM610_05970 NZ_JAVRJX010000001.1 Protein Homology CDS 1200739 1201596 . - 0 ID=cds-WP_311541890.1;Parent=gene-RM610_RS05945;Dbxref=GenBank:WP_311541890.1;Name=WP_311541890.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF012372.7;locus_tag=RM610_RS05945;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_311541890.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1201673 1201891 . + . ID=gene-RM610_RS12055;Name=RM610_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12055 NZ_JAVRJX010000001.1 Protein Homology CDS 1201673 1201891 . + 0 ID=cds-WP_375712509.1;Parent=gene-RM610_RS12055;Dbxref=GenBank:WP_375712509.1;Name=WP_375712509.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.7;locus_tag=RM610_RS12055;product=hypothetical protein;protein_id=WP_375712509.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1201819 1201998 . - . ID=gene-RM610_RS05950;Name=RM610_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05950;old_locus_tag=RM610_05975 NZ_JAVRJX010000001.1 Protein Homology CDS 1201819 1201998 . - 0 ID=cds-WP_311541891.1;Parent=gene-RM610_RS05950;Dbxref=GenBank:WP_311541891.1;Name=WP_311541891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504520.1;locus_tag=RM610_RS05950;product=hypothetical protein;protein_id=WP_311541891.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1202001 1202609 . - . ID=gene-RM610_RS05955;Name=RM610_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05955;old_locus_tag=RM610_05980 NZ_JAVRJX010000001.1 Protein Homology CDS 1202001 1202609 . - 0 ID=cds-WP_311541892.1;Parent=gene-RM610_RS05955;Dbxref=GenBank:WP_311541892.1;Name=WP_311541892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416626.1;locus_tag=RM610_RS05955;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_311541892.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1202631 1203644 . - . ID=gene-RM610_RS05960;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=RM610_RS05960;old_locus_tag=RM610_05985 NZ_JAVRJX010000001.1 Protein Homology CDS 1202631 1203644 . - 0 ID=cds-WP_311541893.1;Parent=gene-RM610_RS05960;Dbxref=GenBank:WP_311541893.1;Name=WP_311541893.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598580.1;locus_tag=RM610_RS05960;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_311541893.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1203644 1204462 . - . ID=gene-RM610_RS05965;Name=RM610_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05965;old_locus_tag=RM610_05990 NZ_JAVRJX010000001.1 Protein Homology CDS 1203644 1204462 . - 0 ID=cds-WP_311541894.1;Parent=gene-RM610_RS05965;Dbxref=GenBank:WP_311541894.1;Name=WP_311541894.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:NF012936.7;locus_tag=RM610_RS05965;product=asparagine synthase-related protein;protein_id=WP_311541894.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1204473 1205153 . - . ID=gene-RM610_RS05970;Name=RM610_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05970;old_locus_tag=RM610_05995 NZ_JAVRJX010000001.1 Protein Homology CDS 1204473 1205153 . - 0 ID=cds-WP_311541895.1;Parent=gene-RM610_RS05970;Dbxref=GenBank:WP_311541895.1;Name=WP_311541895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019846.7;locus_tag=RM610_RS05970;product=methyltransferase domain-containing protein;protein_id=WP_311541895.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1205162 1205431 . - . ID=gene-RM610_RS05975;Name=RM610_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05975;old_locus_tag=RM610_06000 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1205162 1205431 . - 0 ID=cds-WP_311541896.1;Parent=gene-RM610_RS05975;Dbxref=GenBank:WP_311541896.1;Name=WP_311541896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05975;product=hypothetical protein;protein_id=WP_311541896.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1205492 1205812 . - . ID=gene-RM610_RS05980;Name=RM610_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05980;old_locus_tag=RM610_06005 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1205492 1205812 . - 0 ID=cds-WP_311541897.1;Parent=gene-RM610_RS05980;Dbxref=GenBank:WP_311541897.1;Name=WP_311541897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05980;product=hypothetical protein;protein_id=WP_311541897.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1205813 1206109 . - . ID=gene-RM610_RS05985;Name=RM610_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05985;old_locus_tag=RM610_06010 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1205813 1206109 . - 0 ID=cds-WP_311541898.1;Parent=gene-RM610_RS05985;Dbxref=GenBank:WP_311541898.1;Name=WP_311541898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05985;product=hypothetical protein;protein_id=WP_311541898.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1206121 1206369 . - . ID=gene-RM610_RS05990;Name=RM610_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05990;old_locus_tag=RM610_06015 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1206121 1206369 . - 0 ID=cds-WP_311541899.1;Parent=gene-RM610_RS05990;Dbxref=GenBank:WP_311541899.1;Name=WP_311541899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05990;product=hypothetical protein;protein_id=WP_311541899.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1206379 1206555 . - . ID=gene-RM610_RS05995;Name=RM610_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS05995;old_locus_tag=RM610_06020 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1206379 1206555 . - 0 ID=cds-WP_311541900.1;Parent=gene-RM610_RS05995;Dbxref=GenBank:WP_311541900.1;Name=WP_311541900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS05995;product=hypothetical protein;protein_id=WP_311541900.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1206524 1206907 . - . ID=gene-RM610_RS06000;Name=RM610_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06000;old_locus_tag=RM610_06025 NZ_JAVRJX010000001.1 Protein Homology CDS 1206524 1206907 . - 0 ID=cds-WP_375712510.1;Parent=gene-RM610_RS06000;Dbxref=GenBank:WP_375712510.1;Name=WP_375712510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365145.1;locus_tag=RM610_RS06000;product=thermonuclease family protein;protein_id=WP_375712510.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1206970 1207464 . - . ID=gene-RM610_RS06005;Name=RM610_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06005;old_locus_tag=RM610_06030 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1206970 1207464 . - 0 ID=cds-WP_311541902.1;Parent=gene-RM610_RS06005;Dbxref=GenBank:WP_311541902.1;Name=WP_311541902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06005;product=hypothetical protein;protein_id=WP_311541902.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1207555 1208850 . - . ID=gene-RM610_RS06010;Name=RM610_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06010;old_locus_tag=RM610_06035 NZ_JAVRJX010000001.1 Protein Homology CDS 1207555 1208850 . - 0 ID=cds-WP_311541903.1;Parent=gene-RM610_RS06010;Dbxref=GenBank:WP_311541903.1;Name=WP_311541903.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187715.1;locus_tag=RM610_RS06010;product=ATP-dependent DNA ligase;protein_id=WP_311541903.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1208840 1209160 . - . ID=gene-RM610_RS06015;Name=RM610_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06015;old_locus_tag=RM610_06040 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1208840 1209160 . - 0 ID=cds-WP_311541904.1;Parent=gene-RM610_RS06015;Dbxref=GenBank:WP_311541904.1;Name=WP_311541904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06015;product=hypothetical protein;protein_id=WP_311541904.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1209241 1209621 . - . ID=gene-RM610_RS06020;Name=RM610_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06020;old_locus_tag=RM610_06045 NZ_JAVRJX010000001.1 Protein Homology CDS 1209241 1209621 . - 0 ID=cds-WP_311541905.1;Parent=gene-RM610_RS06020;Dbxref=GenBank:WP_311541905.1;Name=WP_311541905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187713.1;locus_tag=RM610_RS06020;product=hypothetical protein;protein_id=WP_311541905.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1209689 1213636 . - . ID=gene-RM610_RS06025;Name=RM610_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06025;old_locus_tag=RM610_06050 NZ_JAVRJX010000001.1 Protein Homology CDS 1209689 1213636 . - 0 ID=cds-WP_311541906.1;Parent=gene-RM610_RS06025;Dbxref=GenBank:WP_311541906.1;Name=WP_311541906.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF019353.7;locus_tag=RM610_RS06025;product=PHP domain-containing protein;protein_id=WP_311541906.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1213660 1214466 . - . ID=gene-RM610_RS06030;Name=RM610_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06030;old_locus_tag=RM610_06055 NZ_JAVRJX010000001.1 Protein Homology CDS 1213660 1214466 . - 0 ID=cds-WP_311541907.1;Parent=gene-RM610_RS06030;Dbxref=GenBank:WP_311541907.1;Name=WP_311541907.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012376.7;locus_tag=RM610_RS06030;product=metallophosphoesterase family protein;protein_id=WP_311541907.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1215145 1215780 . + . ID=gene-RM610_RS06035;Name=RM610_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06035;old_locus_tag=RM610_06060 NZ_JAVRJX010000001.1 Protein Homology CDS 1215145 1215780 . + 0 ID=cds-WP_165885961.1;Parent=gene-RM610_RS06035;Dbxref=GenBank:WP_165885961.1;Name=WP_165885961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474651.1;locus_tag=RM610_RS06035;product=Ltp family lipoprotein;protein_id=WP_165885961.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1215963 1216676 . - . ID=gene-RM610_RS06040;Name=RM610_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06040;old_locus_tag=RM610_06065 NZ_JAVRJX010000001.1 Protein Homology CDS 1215963 1216676 . - 0 ID=cds-WP_311541908.1;Parent=gene-RM610_RS06040;Dbxref=GenBank:WP_311541908.1;Name=WP_311541908.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM610_RS06040;product=ATP-binding cassette domain-containing protein;protein_id=WP_311541908.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1216685 1217404 . - . ID=gene-RM610_RS06045;Name=RM610_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06045;old_locus_tag=RM610_06070 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1216685 1217404 . - 0 ID=cds-WP_311541909.1;Parent=gene-RM610_RS06045;Dbxref=GenBank:WP_311541909.1;Name=WP_311541909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06045;product=hypothetical protein;protein_id=WP_311541909.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1217415 1218455 . - . ID=gene-RM610_RS06050;Name=RM610_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06050;old_locus_tag=RM610_06075 NZ_JAVRJX010000001.1 Protein Homology CDS 1217415 1218455 . - 0 ID=cds-WP_311541910.1;Parent=gene-RM610_RS06050;Dbxref=GenBank:WP_311541910.1;Name=WP_311541910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014661.7;locus_tag=RM610_RS06050;product=YcaO-like family protein;protein_id=WP_311541910.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1218467 1219243 . - . ID=gene-RM610_RS06055;Name=RM610_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06055;old_locus_tag=RM610_06080 NZ_JAVRJX010000001.1 Protein Homology CDS 1218467 1219243 . - 0 ID=cds-WP_311541911.1;Parent=gene-RM610_RS06055;Dbxref=GenBank:WP_311541911.1;Name=WP_311541911.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.7;locus_tag=RM610_RS06055;product=nitroreductase family protein;protein_id=WP_311541911.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1219236 1220234 . - . ID=gene-RM610_RS06060;Name=RM610_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06060;old_locus_tag=RM610_06085 NZ_JAVRJX010000001.1 Protein Homology CDS 1219236 1220234 . - 0 ID=cds-WP_311541912.1;Parent=gene-RM610_RS06060;Dbxref=GenBank:WP_311541912.1;Name=WP_311541912.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04424.1;locus_tag=RM610_RS06060;product=McbB family protein;protein_id=WP_311541912.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1220510 1220680 . - . ID=gene-RM610_RS06065;Name=RM610_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06065;old_locus_tag=RM610_06090 NZ_JAVRJX010000001.1 Protein Homology CDS 1220510 1220680 . - 0 ID=cds-WP_311541913.1;Parent=gene-RM610_RS06065;Dbxref=GenBank:WP_311541913.1;Name=WP_311541913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723194.1;locus_tag=RM610_RS06065;product=hypothetical protein;protein_id=WP_311541913.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1220920 1222023 . - . ID=gene-RM610_RS06070;Name=RM610_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06070;old_locus_tag=RM610_06095 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1220920 1222023 . - 0 ID=cds-WP_311541915.1;Parent=gene-RM610_RS06070;Dbxref=GenBank:WP_311541915.1;Name=WP_311541915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06070;product=hypothetical protein;protein_id=WP_311541915.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1222674 1223270 . - . ID=gene-RM610_RS06075;Name=RM610_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06075;old_locus_tag=RM610_06100 NZ_JAVRJX010000001.1 Protein Homology CDS 1222674 1223270 . - 0 ID=cds-WP_311541916.1;Parent=gene-RM610_RS06075;Dbxref=GenBank:WP_311541916.1;Name=WP_311541916.1;Ontology_term=GO:0006644,GO:0050482,GO:0004623;gbkey=CDS;go_function=A2-type glycerophospholipase activity|0004623||IEA;go_process=phospholipid metabolic process|0006644||IEA,arachidonate secretion|0050482||IEA;inference=COORDINATES: protein motif:HMM:NF012297.7;locus_tag=RM610_RS06075;product=phospholipase A2 family protein;protein_id=WP_311541916.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1223720 1224979 . - . ID=gene-RM610_RS06080;Name=RM610_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06080;old_locus_tag=RM610_06105 NZ_JAVRJX010000001.1 Protein Homology CDS 1223720 1224979 . - 0 ID=cds-WP_311541917.1;Parent=gene-RM610_RS06080;Dbxref=GenBank:WP_311541917.1;Name=WP_311541917.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999567.1;locus_tag=RM610_RS06080;product=Y-family DNA polymerase;protein_id=WP_311541917.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1225253 1225651 . + . ID=gene-RM610_RS06085;Name=RM610_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06085;old_locus_tag=RM610_06110 NZ_JAVRJX010000001.1 Protein Homology CDS 1225253 1225651 . + 0 ID=cds-WP_311541918.1;Parent=gene-RM610_RS06085;Dbxref=GenBank:WP_311541918.1;Name=WP_311541918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025825.7;locus_tag=RM610_RS06085;product=PH domain-containing protein;protein_id=WP_311541918.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1225720 1226565 . - . ID=gene-RM610_RS06090;Name=RM610_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06090;old_locus_tag=RM610_06115 NZ_JAVRJX010000001.1 Protein Homology CDS 1225720 1226565 . - 0 ID=cds-WP_311541919.1;Parent=gene-RM610_RS06090;Dbxref=GenBank:WP_311541919.1;Name=WP_311541919.1;Ontology_term=GO:0006508,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013700.8;locus_tag=RM610_RS06090;product=M23 family metallopeptidase;protein_id=WP_311541919.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1226567 1227607 . - . ID=gene-RM610_RS06095;Name=RM610_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06095;old_locus_tag=RM610_06120 NZ_JAVRJX010000001.1 Protein Homology CDS 1226567 1227607 . - 0 ID=cds-WP_311541920.1;Parent=gene-RM610_RS06095;Dbxref=GenBank:WP_311541920.1;Name=WP_311541920.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: protein motif:HMM:NF024748.8;locus_tag=RM610_RS06095;product=serine hydrolase;protein_id=WP_311541920.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1227594 1227980 . - . ID=gene-RM610_RS06100;Name=RM610_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06100;old_locus_tag=RM610_06125 NZ_JAVRJX010000001.1 Protein Homology CDS 1227594 1227980 . - 0 ID=cds-WP_311541921.1;Parent=gene-RM610_RS06100;Dbxref=GenBank:WP_311541921.1;Name=WP_311541921.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: protein motif:HMM:NF016056.7;locus_tag=RM610_RS06100;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_311541921.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1227973 1228872 . - . ID=gene-RM610_RS06105;Name=RM610_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06105;old_locus_tag=RM610_06130 NZ_JAVRJX010000001.1 Protein Homology CDS 1227973 1228872 . - 0 ID=cds-WP_311541922.1;Parent=gene-RM610_RS06105;Dbxref=GenBank:WP_311541922.1;Name=WP_311541922.1;Ontology_term=GO:0017187,GO:0008488;gbkey=CDS;go_function=gamma-glutamyl carboxylase activity|0008488||IEA;go_process=peptidyl-glutamic acid carboxylation|0017187||IEA;inference=COORDINATES: protein motif:HMM:NF016946.7;locus_tag=RM610_RS06105;product=HTTM domain-containing protein;protein_id=WP_311541922.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1228884 1229546 . - . ID=gene-RM610_RS06110;Name=RM610_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06110;old_locus_tag=RM610_06135 NZ_JAVRJX010000001.1 Protein Homology CDS 1228884 1229546 . - 0 ID=cds-WP_311541924.1;Parent=gene-RM610_RS06110;Dbxref=GenBank:WP_311541924.1;Name=WP_311541924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040205.6;locus_tag=RM610_RS06110;product=DUF5819 family protein;protein_id=WP_311541924.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1229605 1229931 . - . ID=gene-RM610_RS06115;Name=RM610_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06115;old_locus_tag=RM610_06140 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1229605 1229931 . - 0 ID=cds-WP_311541926.1;Parent=gene-RM610_RS06115;Dbxref=GenBank:WP_311541926.1;Name=WP_311541926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06115;product=hypothetical protein;protein_id=WP_311541926.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1230284 1232848 . - . ID=gene-RM610_RS06120;Name=RM610_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06120;old_locus_tag=RM610_06145 NZ_JAVRJX010000001.1 Protein Homology CDS 1230284 1232848 . - 0 ID=cds-WP_311541927.1;Parent=gene-RM610_RS06120;Dbxref=GenBank:WP_311541927.1;Name=WP_311541927.1;Ontology_term=GO:0007155;gbkey=CDS;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF021909.8;locus_tag=RM610_RS06120;product=fibrinogen-binding adhesin SdrG C-terminal domain-containing protein;protein_id=WP_311541927.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1233081 1233350 . - . ID=gene-RM610_RS06125;Name=RM610_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06125;old_locus_tag=RM610_06150 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1233081 1233350 . - 0 ID=cds-WP_305850771.1;Parent=gene-RM610_RS06125;Dbxref=GenBank:WP_305850771.1;Name=WP_305850771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06125;product=hypothetical protein;protein_id=WP_305850771.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1233472 1234218 . + . ID=gene-RM610_RS06130;Name=RM610_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06130;old_locus_tag=RM610_06155 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1233472 1234218 . + 0 ID=cds-WP_311541928.1;Parent=gene-RM610_RS06130;Dbxref=GenBank:WP_311541928.1;Name=WP_311541928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06130;product=hypothetical protein;protein_id=WP_311541928.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1234238 1234687 . - . ID=gene-RM610_RS06135;Name=RM610_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06135;old_locus_tag=RM610_06160 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1234238 1234687 . - 0 ID=cds-WP_311541929.1;Parent=gene-RM610_RS06135;Dbxref=GenBank:WP_311541929.1;Name=WP_311541929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06135;product=hypothetical protein;protein_id=WP_311541929.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1234715 1235383 . - . ID=gene-RM610_RS06140;Name=RM610_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06140;old_locus_tag=RM610_06165 NZ_JAVRJX010000001.1 Protein Homology CDS 1234715 1235383 . - 0 ID=cds-WP_311541930.1;Parent=gene-RM610_RS06140;Dbxref=GenBank:WP_311541930.1;Name=WP_311541930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020968.7;locus_tag=RM610_RS06140;product=RNA ligase family protein;protein_id=WP_311541930.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1235426 1235614 . - . ID=gene-RM610_RS06145;Name=RM610_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06145;old_locus_tag=RM610_06170 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1235426 1235614 . - 0 ID=cds-WP_311541931.1;Parent=gene-RM610_RS06145;Dbxref=GenBank:WP_311541931.1;Name=WP_311541931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06145;product=hypothetical protein;protein_id=WP_311541931.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1235835 1236320 . - . ID=gene-RM610_RS06150;Name=RM610_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06150;old_locus_tag=RM610_06175 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1235835 1236320 . - 0 ID=cds-WP_311541932.1;Parent=gene-RM610_RS06150;Dbxref=GenBank:WP_311541932.1;Name=WP_311541932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06150;product=hypothetical protein;protein_id=WP_311541932.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1236320 1236553 . - . ID=gene-RM610_RS06155;Name=RM610_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06155;old_locus_tag=RM610_06180 NZ_JAVRJX010000001.1 Protein Homology CDS 1236320 1236553 . - 0 ID=cds-WP_311541933.1;Parent=gene-RM610_RS06155;Dbxref=GenBank:WP_311541933.1;Name=WP_311541933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015977805.1;locus_tag=RM610_RS06155;product=hypothetical protein;protein_id=WP_311541933.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1236555 1236719 . - . ID=gene-RM610_RS06160;Name=RM610_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06160;old_locus_tag=RM610_06185 NZ_JAVRJX010000001.1 Protein Homology CDS 1236555 1236719 . - 0 ID=cds-WP_311541934.1;Parent=gene-RM610_RS06160;Dbxref=GenBank:WP_311541934.1;Name=WP_311541934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898296.1;locus_tag=RM610_RS06160;product=hypothetical protein;protein_id=WP_311541934.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1236716 1237201 . - . ID=gene-RM610_RS06165;Name=RM610_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06165;old_locus_tag=RM610_06190 NZ_JAVRJX010000001.1 Protein Homology CDS 1236716 1237201 . - 0 ID=cds-WP_311541935.1;Parent=gene-RM610_RS06165;Dbxref=GenBank:WP_311541935.1;Name=WP_311541935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504570.1;locus_tag=RM610_RS06165;product=hypothetical protein;protein_id=WP_311541935.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1237441 1237674 . - . ID=gene-RM610_RS06170;Name=RM610_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06170;old_locus_tag=RM610_06195 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1237441 1237674 . - 0 ID=cds-WP_311541936.1;Parent=gene-RM610_RS06170;Dbxref=GenBank:WP_311541936.1;Name=WP_311541936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06170;product=hypothetical protein;protein_id=WP_311541936.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1237675 1237902 . - . ID=gene-RM610_RS06175;Name=RM610_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06175;old_locus_tag=RM610_06200 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1237675 1237902 . - 0 ID=cds-WP_311541937.1;Parent=gene-RM610_RS06175;Dbxref=GenBank:WP_311541937.1;Name=WP_311541937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06175;product=hypothetical protein;protein_id=WP_311541937.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1237895 1238122 . - . ID=gene-RM610_RS06180;Name=RM610_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06180;old_locus_tag=RM610_06205 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1237895 1238122 . - 0 ID=cds-WP_085622023.1;Parent=gene-RM610_RS06180;Dbxref=GenBank:WP_085622023.1;Name=WP_085622023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06180;product=hypothetical protein;protein_id=WP_085622023.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1238112 1238315 . - . ID=gene-RM610_RS06185;Name=RM610_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06185;old_locus_tag=RM610_06210 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1238112 1238315 . - 0 ID=cds-WP_086375155.1;Parent=gene-RM610_RS06185;Dbxref=GenBank:WP_086375155.1;Name=WP_086375155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06185;product=hypothetical protein;protein_id=WP_086375155.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1238317 1238673 . - . ID=gene-RM610_RS06190;Name=RM610_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06190;old_locus_tag=RM610_06215 NZ_JAVRJX010000001.1 Protein Homology CDS 1238317 1238673 . - 0 ID=cds-WP_311541938.1;Parent=gene-RM610_RS06190;Dbxref=GenBank:WP_311541938.1;Name=WP_311541938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021182.7;locus_tag=RM610_RS06190;product=YopX family protein;protein_id=WP_311541938.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1238670 1239068 . - . ID=gene-RM610_RS06195;Name=RM610_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06195;old_locus_tag=RM610_06220 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1238670 1239068 . - 0 ID=cds-WP_311541940.1;Parent=gene-RM610_RS06195;Dbxref=GenBank:WP_311541940.1;Name=WP_311541940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06195;product=hypothetical protein;protein_id=WP_311541940.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1239065 1239466 . - . ID=gene-RM610_RS06200;Name=RM610_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06200;old_locus_tag=RM610_06225 NZ_JAVRJX010000001.1 Protein Homology CDS 1239065 1239466 . - 0 ID=cds-WP_311541941.1;Parent=gene-RM610_RS06200;Dbxref=GenBank:WP_311541941.1;Name=WP_311541941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000693615.1;locus_tag=RM610_RS06200;product=hypothetical protein;protein_id=WP_311541941.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1239456 1239836 . - . ID=gene-RM610_RS06205;Name=RM610_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06205;old_locus_tag=RM610_06230 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1239456 1239836 . - 0 ID=cds-WP_311541942.1;Parent=gene-RM610_RS06205;Dbxref=GenBank:WP_311541942.1;Name=WP_311541942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06205;product=hypothetical protein;protein_id=WP_311541942.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1239897 1240292 . - . ID=gene-RM610_RS06210;Name=RM610_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06210;old_locus_tag=RM610_06235 NZ_JAVRJX010000001.1 Protein Homology CDS 1239897 1240292 . - 0 ID=cds-WP_311541943.1;Parent=gene-RM610_RS06210;Dbxref=GenBank:WP_311541943.1;Name=WP_311541943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040423.6;locus_tag=RM610_RS06210;product=helix-turn-helix domain-containing protein;protein_id=WP_311541943.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1240514 1240810 . - . ID=gene-RM610_RS12115;Name=RM610_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12115 NZ_JAVRJX010000001.1 Protein Homology CDS 1240514 1240810 . - 0 ID=cds-WP_446289377.1;Parent=gene-RM610_RS12115;Dbxref=GenBank:WP_446289377.1;Name=WP_446289377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024421.7;locus_tag=RM610_RS12115;product=DUF3885 domain-containing protein;protein_id=WP_446289377.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1241302 1243056 . - . ID=gene-RM610_RS06220;Name=RM610_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06220;old_locus_tag=RM610_06245 NZ_JAVRJX010000001.1 Protein Homology CDS 1241302 1243056 . - 0 ID=cds-WP_311541945.1;Parent=gene-RM610_RS06220;Dbxref=GenBank:WP_311541945.1;Name=WP_311541945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865239.1;locus_tag=RM610_RS06220;product=DHH family phosphoesterase;protein_id=WP_311541945.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1243053 1244168 . - . ID=gene-RM610_RS06225;Name=RM610_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06225;old_locus_tag=RM610_06250 NZ_JAVRJX010000001.1 Protein Homology CDS 1243053 1244168 . - 0 ID=cds-WP_311541946.1;Parent=gene-RM610_RS06225;Dbxref=GenBank:WP_311541946.1;Name=WP_311541946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459730.1;locus_tag=RM610_RS06225;product=hypothetical protein;protein_id=WP_311541946.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1244184 1245749 . - . ID=gene-RM610_RS06230;Name=RM610_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06230;old_locus_tag=RM610_06255 NZ_JAVRJX010000001.1 Protein Homology CDS 1244184 1245749 . - 0 ID=cds-WP_311541947.1;Parent=gene-RM610_RS06230;Dbxref=GenBank:WP_311541947.1;Name=WP_311541947.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504676.1;locus_tag=RM610_RS06230;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_311541947.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1245768 1246289 . - . ID=gene-RM610_RS06235;Name=RM610_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06235;old_locus_tag=RM610_06260 NZ_JAVRJX010000001.1 Protein Homology CDS 1245768 1246289 . - 0 ID=cds-WP_311541948.1;Parent=gene-RM610_RS06235;Dbxref=GenBank:WP_311541948.1;Name=WP_311541948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504677.1;locus_tag=RM610_RS06235;product=YorH family phage-derived protein;protein_id=WP_311541948.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1246468 1247436 . - . ID=gene-RM610_RS06240;Name=RM610_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06240;old_locus_tag=RM610_06265 NZ_JAVRJX010000001.1 Protein Homology CDS 1246468 1247436 . - 0 ID=cds-WP_311541949.1;Parent=gene-RM610_RS06240;Dbxref=GenBank:WP_311541949.1;Name=WP_311541949.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050755.1;locus_tag=RM610_RS06240;product=ATP-binding protein;protein_id=WP_311541949.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1247540 1248490 . - . ID=gene-RM610_RS06245;Name=RM610_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06245;old_locus_tag=RM610_06270 NZ_JAVRJX010000001.1 Protein Homology CDS 1247540 1248490 . - 0 ID=cds-WP_311541951.1;Parent=gene-RM610_RS06245;Dbxref=GenBank:WP_311541951.1;Name=WP_311541951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852323.1;locus_tag=RM610_RS06245;product=YorF family protein;protein_id=WP_311541951.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1248528 1249178 . - . ID=gene-RM610_RS06250;Name=RM610_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06250;old_locus_tag=RM610_06275 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1248528 1249178 . - 0 ID=cds-WP_311541952.1;Parent=gene-RM610_RS06250;Dbxref=GenBank:WP_311541952.1;Name=WP_311541952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06250;product=hypothetical protein;protein_id=WP_311541952.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1249190 1249702 . - . ID=gene-RM610_RS06255;Name=RM610_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06255;old_locus_tag=RM610_06280 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1249190 1249702 . - 0 ID=cds-WP_311541953.1;Parent=gene-RM610_RS06255;Dbxref=GenBank:WP_311541953.1;Name=WP_311541953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06255;product=hypothetical protein;protein_id=WP_311541953.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1249725 1249967 . - . ID=gene-RM610_RS06260;Name=RM610_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06260;old_locus_tag=RM610_06285 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1249725 1249967 . - 0 ID=cds-WP_311541954.1;Parent=gene-RM610_RS06260;Dbxref=GenBank:WP_311541954.1;Name=WP_311541954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06260;product=hypothetical protein;protein_id=WP_311541954.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1250095 1251114 . - . ID=gene-RM610_RS06265;Name=RM610_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06265;old_locus_tag=RM610_06290 NZ_JAVRJX010000001.1 Protein Homology CDS 1250095 1251114 . - 0 ID=cds-WP_311541956.1;Parent=gene-RM610_RS06265;Dbxref=GenBank:WP_311541956.1;Name=WP_311541956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046383.4;locus_tag=RM610_RS06265;product=phage lytic cycle repressor MrpR family protein;protein_id=WP_311541956.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1251124 1252407 . - . ID=gene-RM610_RS06270;Name=RM610_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06270;old_locus_tag=RM610_06295 NZ_JAVRJX010000001.1 Protein Homology CDS 1251124 1252407 . - 0 ID=cds-WP_311541957.1;Parent=gene-RM610_RS06270;Dbxref=GenBank:WP_311541957.1;Name=WP_311541957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504682.1;locus_tag=RM610_RS06270;product=hypothetical protein;protein_id=WP_311541957.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1252720 1253754 . - . ID=gene-RM610_RS06275;Name=RM610_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06275;old_locus_tag=RM610_06300 NZ_JAVRJX010000001.1 Protein Homology CDS 1252720 1253754 . - 0 ID=cds-WP_311541958.1;Parent=gene-RM610_RS06275;Dbxref=GenBank:WP_311541958.1;Name=WP_311541958.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.7;locus_tag=RM610_RS06275;product=tyrosine-type recombinase/integrase;protein_id=WP_311541958.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1254383 1254952 . - . ID=gene-RM610_RS06280;Name=RM610_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06280;old_locus_tag=RM610_06305 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1254383 1254952 . - 0 ID=cds-WP_311541959.1;Parent=gene-RM610_RS06280;Dbxref=GenBank:WP_311541959.1;Name=WP_311541959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06280;product=hypothetical protein;protein_id=WP_311541959.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1255018 1255605 . - . ID=gene-RM610_RS06285;Name=RM610_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06285;old_locus_tag=RM610_06310 NZ_JAVRJX010000001.1 Protein Homology CDS 1255018 1255605 . - 0 ID=cds-WP_311541960.1;Parent=gene-RM610_RS06285;Dbxref=GenBank:WP_311541960.1;Name=WP_311541960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018926.7;locus_tag=RM610_RS06285;product=antirestriction protein ArdA;protein_id=WP_311541960.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1255780 1256064 . - . ID=gene-RM610_RS06290;Name=RM610_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06290;old_locus_tag=RM610_06315 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1255780 1256064 . - 0 ID=cds-WP_311541961.1;Parent=gene-RM610_RS06290;Dbxref=GenBank:WP_311541961.1;Name=WP_311541961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06290;product=hypothetical protein;protein_id=WP_311541961.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1256087 1256404 . - . ID=gene-RM610_RS06295;Name=RM610_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06295;old_locus_tag=RM610_06320 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1256087 1256404 . - 0 ID=cds-WP_311541962.1;Parent=gene-RM610_RS06295;Dbxref=GenBank:WP_311541962.1;Name=WP_311541962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06295;product=hypothetical protein;protein_id=WP_311541962.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1256425 1256661 . - . ID=gene-RM610_RS06300;Name=RM610_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06300;old_locus_tag=RM610_06325 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1256425 1256661 . - 0 ID=cds-WP_311541963.1;Parent=gene-RM610_RS06300;Dbxref=GenBank:WP_311541963.1;Name=WP_311541963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06300;product=hypothetical protein;protein_id=WP_311541963.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1256699 1257052 . - . ID=gene-RM610_RS06305;Name=RM610_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06305;old_locus_tag=RM610_06330 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1256699 1257052 . - 0 ID=cds-WP_311541964.1;Parent=gene-RM610_RS06305;Dbxref=GenBank:WP_311541964.1;Name=WP_311541964.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06305;product=hypothetical protein;protein_id=WP_311541964.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1257171 1257326 . - . ID=gene-RM610_RS06310;Name=RM610_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06310;old_locus_tag=RM610_06335 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1257171 1257326 . - 0 ID=cds-WP_311541965.1;Parent=gene-RM610_RS06310;Dbxref=GenBank:WP_311541965.1;Name=WP_311541965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06310;product=hypothetical protein;protein_id=WP_311541965.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1257368 1257577 . - . ID=gene-RM610_RS06315;Name=RM610_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06315;old_locus_tag=RM610_06340 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1257368 1257577 . - 0 ID=cds-WP_311541966.1;Parent=gene-RM610_RS06315;Dbxref=GenBank:WP_311541966.1;Name=WP_311541966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06315;product=hypothetical protein;protein_id=WP_311541966.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1257570 1257794 . - . ID=gene-RM610_RS06320;Name=RM610_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06320;old_locus_tag=RM610_06345 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1257570 1257794 . - 0 ID=cds-WP_311541967.1;Parent=gene-RM610_RS06320;Dbxref=GenBank:WP_311541967.1;Name=WP_311541967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06320;product=hypothetical protein;protein_id=WP_311541967.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1257808 1258185 . - . ID=gene-RM610_RS06325;Name=RM610_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06325;old_locus_tag=RM610_06350 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1257808 1258185 . - 0 ID=cds-WP_311541968.1;Parent=gene-RM610_RS06325;Dbxref=GenBank:WP_311541968.1;Name=WP_311541968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06325;product=hypothetical protein;protein_id=WP_311541968.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1258210 1258428 . - . ID=gene-RM610_RS06330;Name=RM610_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06330;old_locus_tag=RM610_06355 NZ_JAVRJX010000001.1 Protein Homology CDS 1258210 1258428 . - 0 ID=cds-WP_311541969.1;Parent=gene-RM610_RS06330;Dbxref=GenBank:WP_311541969.1;Name=WP_311541969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504552.1;locus_tag=RM610_RS06330;product=hypothetical protein;protein_id=WP_311541969.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1258441 1258686 . - . ID=gene-RM610_RS06335;Name=RM610_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06335;old_locus_tag=RM610_06360 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1258441 1258686 . - 0 ID=cds-WP_311541970.1;Parent=gene-RM610_RS06335;Dbxref=GenBank:WP_311541970.1;Name=WP_311541970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06335;product=hypothetical protein;protein_id=WP_311541970.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1258707 1259042 . - . ID=gene-RM610_RS06340;Name=RM610_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06340;old_locus_tag=RM610_06365 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1258707 1259042 . - 0 ID=cds-WP_311541971.1;Parent=gene-RM610_RS06340;Dbxref=GenBank:WP_311541971.1;Name=WP_311541971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06340;product=hypothetical protein;protein_id=WP_311541971.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1259209 1259562 . - . ID=gene-RM610_RS06345;Name=RM610_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06345;old_locus_tag=RM610_06370 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1259209 1259562 . - 0 ID=cds-WP_311541972.1;Parent=gene-RM610_RS06345;Dbxref=GenBank:WP_311541972.1;Name=WP_311541972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06345;product=hypothetical protein;protein_id=WP_311541972.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1259703 1259903 . - . ID=gene-RM610_RS06350;Name=RM610_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06350;old_locus_tag=RM610_06375 NZ_JAVRJX010000001.1 Protein Homology CDS 1259703 1259903 . - 0 ID=cds-WP_311541973.1;Parent=gene-RM610_RS06350;Dbxref=GenBank:WP_311541973.1;Name=WP_311541973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219857.1;locus_tag=RM610_RS06350;product=hypothetical protein;protein_id=WP_311541973.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1260086 1260238 . - . ID=gene-RM610_RS06355;Name=RM610_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06355;old_locus_tag=RM610_06380 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1260086 1260238 . - 0 ID=cds-WP_311541974.1;Parent=gene-RM610_RS06355;Dbxref=GenBank:WP_311541974.1;Name=WP_311541974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06355;product=hypothetical protein;protein_id=WP_311541974.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1262676 1263164 . + . ID=gene-RM610_RS06360;Name=RM610_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06360;old_locus_tag=RM610_06385 NZ_JAVRJX010000001.1 Protein Homology CDS 1262676 1263164 . + 0 ID=cds-WP_311541975.1;Parent=gene-RM610_RS06360;Dbxref=GenBank:WP_311541975.1;Name=WP_311541975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424970.1;locus_tag=RM610_RS06360;product=hypothetical protein;protein_id=WP_311541975.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1263449 1264027 . - . ID=gene-RM610_RS06365;Name=RM610_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06365;old_locus_tag=RM610_06390 NZ_JAVRJX010000001.1 Protein Homology CDS 1263449 1264027 . - 0 ID=cds-WP_311541976.1;Parent=gene-RM610_RS06365;Dbxref=GenBank:WP_311541976.1;Name=WP_311541976.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162808.1;locus_tag=RM610_RS06365;product=DsbA family protein;protein_id=WP_311541976.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1264345 1264683 . - . ID=gene-RM610_RS06370;Name=RM610_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06370;old_locus_tag=RM610_06395 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1264345 1264683 . - 0 ID=cds-WP_311541977.1;Parent=gene-RM610_RS06370;Dbxref=GenBank:WP_311541977.1;Name=WP_311541977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06370;product=hypothetical protein;protein_id=WP_311541977.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1265369 1266262 . - . ID=gene-RM610_RS06375;Name=RM610_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06375;old_locus_tag=RM610_06400 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1265369 1266262 . - 0 ID=cds-WP_311541978.1;Parent=gene-RM610_RS06375;Dbxref=GenBank:WP_311541978.1;Name=WP_311541978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06375;product=hypothetical protein;protein_id=WP_311541978.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1266284 1268563 . - . ID=gene-RM610_RS06380;Name=RM610_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06380;old_locus_tag=RM610_06405 NZ_JAVRJX010000001.1 Protein Homology CDS 1266284 1268563 . - 0 ID=cds-WP_311541979.1;Parent=gene-RM610_RS06380;Dbxref=GenBank:WP_311541979.1;Name=WP_311541979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000409961.1;locus_tag=RM610_RS06380;product=AAA family ATPase;protein_id=WP_311541979.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1268672 1270141 . + . ID=gene-RM610_RS06385;Name=RM610_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06385;old_locus_tag=RM610_06410 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1268672 1270141 . + 0 ID=cds-WP_311541980.1;Parent=gene-RM610_RS06385;Dbxref=GenBank:WP_311541980.1;Name=WP_311541980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06385;product=hypothetical protein;protein_id=WP_311541980.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1270344 1270673 . + . ID=gene-RM610_RS06390;Name=RM610_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06390;old_locus_tag=RM610_06415 NZ_JAVRJX010000001.1 Protein Homology CDS 1270344 1270673 . + 0 ID=cds-WP_311541981.1;Parent=gene-RM610_RS06390;Dbxref=GenBank:WP_311541981.1;Name=WP_311541981.1;Ontology_term=GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;inference=COORDINATES: protein motif:HMM:NF012442.7;locus_tag=RM610_RS06390;product=HU family DNA-binding protein;protein_id=WP_311541981.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1270690 1270875 . + . ID=gene-RM610_RS06395;Name=RM610_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06395;old_locus_tag=RM610_06420 NZ_JAVRJX010000001.1 Protein Homology CDS 1270690 1270875 . + 0 ID=cds-WP_311541982.1;Parent=gene-RM610_RS06395;Dbxref=GenBank:WP_311541982.1;Name=WP_311541982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057341.1;locus_tag=RM610_RS06395;product=YonK family protein;protein_id=WP_311541982.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1270882 1272084 . + . ID=gene-RM610_RS06400;Name=RM610_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06400;old_locus_tag=RM610_06425 NZ_JAVRJX010000001.1 Protein Homology CDS 1270882 1272084 . + 0 ID=cds-WP_311541983.1;Parent=gene-RM610_RS06400;Dbxref=GenBank:WP_311541983.1;Name=WP_311541983.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.7;locus_tag=RM610_RS06400;product=metallophosphoesterase;protein_id=WP_311541983.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1272892 1273764 . + . ID=gene-RM610_RS06405;Name=RM610_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06405;old_locus_tag=RM610_06430 NZ_JAVRJX010000001.1 Protein Homology CDS 1272892 1273764 . + 0 ID=cds-WP_311541984.1;Parent=gene-RM610_RS06405;Dbxref=GenBank:WP_311541984.1;Name=WP_311541984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007716.1;locus_tag=RM610_RS06405;product=YonG family phage-derived protein;protein_id=WP_311541984.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1273764 1275569 . + . ID=gene-RM610_RS06410;Name=RM610_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06410;old_locus_tag=RM610_06435 NZ_JAVRJX010000001.1 Protein Homology CDS 1273764 1275569 . + 0 ID=cds-WP_311541985.1;Parent=gene-RM610_RS06410;Dbxref=GenBank:WP_311541985.1;Name=WP_311541985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504830.1;locus_tag=RM610_RS06410;product=terminase large subunit domain-containing protein;protein_id=WP_311541985.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1275589 1277139 . + . ID=gene-RM610_RS06415;Name=RM610_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06415;old_locus_tag=RM610_06440 NZ_JAVRJX010000001.1 Protein Homology CDS 1275589 1277139 . + 0 ID=cds-WP_311541986.1;Parent=gene-RM610_RS06415;Dbxref=GenBank:WP_311541986.1;Name=WP_311541986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389594.1;locus_tag=RM610_RS06415;product=hypothetical protein;protein_id=WP_311541986.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1277132 1278637 . + . ID=gene-RM610_RS06420;Name=RM610_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06420;old_locus_tag=RM610_06445 NZ_JAVRJX010000001.1 Protein Homology CDS 1277132 1278637 . + 0 ID=cds-WP_311541987.1;Parent=gene-RM610_RS06420;Dbxref=GenBank:WP_311541987.1;Name=WP_311541987.1;Ontology_term=GO:0006260,GO:0042254,GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;go_process=DNA replication|0006260||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043654.1;locus_tag=RM610_RS06420;product=NOC3 family protein;protein_id=WP_311541987.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1278666 1279097 . + . ID=gene-RM610_RS06425;Name=RM610_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06425;old_locus_tag=RM610_06450 NZ_JAVRJX010000001.1 Protein Homology CDS 1278666 1279097 . + 0 ID=cds-WP_039644944.1;Parent=gene-RM610_RS06425;Dbxref=GenBank:WP_039644944.1;Name=WP_039644944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187615.1;locus_tag=RM610_RS06425;product=hypothetical protein;protein_id=WP_039644944.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1279124 1280128 . + . ID=gene-RM610_RS06430;Name=RM610_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06430;old_locus_tag=RM610_06455 NZ_JAVRJX010000001.1 Protein Homology CDS 1279124 1280128 . + 0 ID=cds-WP_311541988.1;Parent=gene-RM610_RS06430;Dbxref=GenBank:WP_311541988.1;Name=WP_311541988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504827.1;locus_tag=RM610_RS06430;product=YonB family capsid-like protein;protein_id=WP_311541988.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1280207 1280770 . + . ID=gene-RM610_RS06435;Name=RM610_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06435;old_locus_tag=RM610_06460 NZ_JAVRJX010000001.1 Protein Homology CDS 1280207 1280770 . + 0 ID=cds-WP_311541989.1;Parent=gene-RM610_RS06435;Dbxref=GenBank:WP_311541989.1;Name=WP_311541989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985468.1;locus_tag=RM610_RS06435;product=hypothetical protein;protein_id=WP_311541989.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1280792 1281208 . + . ID=gene-RM610_RS06440;Name=RM610_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06440;old_locus_tag=RM610_06465 NZ_JAVRJX010000001.1 Protein Homology CDS 1280792 1281208 . + 0 ID=cds-WP_311541990.1;Parent=gene-RM610_RS06440;Dbxref=GenBank:WP_311541990.1;Name=WP_311541990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134539.1;locus_tag=RM610_RS06440;product=hypothetical protein;protein_id=WP_311541990.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1281210 1281884 . + . ID=gene-RM610_RS06445;Name=RM610_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06445;old_locus_tag=RM610_06470 NZ_JAVRJX010000001.1 Protein Homology CDS 1281210 1281884 . + 0 ID=cds-WP_311541991.1;Parent=gene-RM610_RS06445;Dbxref=GenBank:WP_311541991.1;Name=WP_311541991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384369.1;locus_tag=RM610_RS06445;product=hypothetical protein;protein_id=WP_311541991.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1281868 1282389 . + . ID=gene-RM610_RS06450;Name=RM610_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06450;old_locus_tag=RM610_06475 NZ_JAVRJX010000001.1 Protein Homology CDS 1281868 1282389 . + 0 ID=cds-WP_311541992.1;Parent=gene-RM610_RS06450;Dbxref=GenBank:WP_311541992.1;Name=WP_311541992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177112.1;locus_tag=RM610_RS06450;product=YomW family phage-derived protein;protein_id=WP_311541992.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1282394 1283203 . + . ID=gene-RM610_RS06455;Name=RM610_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06455;old_locus_tag=RM610_06480 NZ_JAVRJX010000001.1 Protein Homology CDS 1282394 1283203 . + 0 ID=cds-WP_311541993.1;Parent=gene-RM610_RS06455;Dbxref=GenBank:WP_311541993.1;Name=WP_311541993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054515.1;locus_tag=RM610_RS06455;product=hypothetical protein;protein_id=WP_311541993.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1283238 1283969 . + . ID=gene-RM610_RS06460;Name=RM610_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06460;old_locus_tag=RM610_06485 NZ_JAVRJX010000001.1 Protein Homology CDS 1283238 1283969 . + 0 ID=cds-WP_311541994.1;Parent=gene-RM610_RS06460;Dbxref=GenBank:WP_311541994.1;Name=WP_311541994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054418.1;locus_tag=RM610_RS06460;product=YomU family phage tail tube protein;protein_id=WP_311541994.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1284062 1284382 . + . ID=gene-RM610_RS06465;Name=RM610_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06465;old_locus_tag=RM610_06490 NZ_JAVRJX010000001.1 Protein Homology CDS 1284062 1284382 . + 0 ID=cds-WP_311542021.1;Parent=gene-RM610_RS06465;Dbxref=GenBank:WP_311542021.1;Name=WP_311542021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.7;locus_tag=RM610_RS06465;product=Ig-like domain-containing protein;protein_id=WP_311542021.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1284451 1284993 . + . ID=gene-RM610_RS06470;Name=RM610_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06470;old_locus_tag=RM610_06495 NZ_JAVRJX010000001.1 Protein Homology CDS 1284451 1284993 . + 0 ID=cds-WP_039644934.1;Parent=gene-RM610_RS06470;Dbxref=GenBank:WP_039644934.1;Name=WP_039644934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504824.1;locus_tag=RM610_RS06470;product=YomO family phage-derived protein;protein_id=WP_039644934.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1285006 1285485 . + . ID=gene-RM610_RS06475;Name=RM610_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06475;old_locus_tag=RM610_06500 NZ_JAVRJX010000001.1 Protein Homology CDS 1285006 1285485 . + 0 ID=cds-WP_274316415.1;Parent=gene-RM610_RS06475;Dbxref=GenBank:WP_274316415.1;Name=WP_274316415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054620.1;locus_tag=RM610_RS06475;product=YomN family phage-derived protein;protein_id=WP_274316415.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1285527 1286525 . + . ID=gene-RM610_RS06480;Name=RM610_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06480;old_locus_tag=RM610_06505 NZ_JAVRJX010000001.1 Protein Homology CDS 1285527 1286525 . + 0 ID=cds-WP_305850051.1;Parent=gene-RM610_RS06480;Dbxref=GenBank:WP_305850051.1;Name=WP_305850051.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504822.1;locus_tag=RM610_RS06480;product=tyrosine-type recombinase/integrase;protein_id=WP_305850051.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1286622 1295168 . + . ID=gene-RM610_RS06485;Name=RM610_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06485;old_locus_tag=RM610_06510 NZ_JAVRJX010000001.1 Protein Homology CDS 1286622 1295168 . + 0 ID=cds-WP_311541995.1;Parent=gene-RM610_RS06485;Dbxref=GenBank:WP_311541995.1;Name=WP_311541995.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825095.1;locus_tag=RM610_RS06485;product=phage tail tape measure protein;protein_id=WP_311541995.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1295206 1297266 . + . ID=gene-RM610_RS06490;Name=RM610_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06490;old_locus_tag=RM610_06515 NZ_JAVRJX010000001.1 Protein Homology CDS 1295206 1297266 . + 0 ID=cds-WP_511575950.1;Parent=gene-RM610_RS06490;Dbxref=GenBank:WP_511575950.1;Name=WP_511575950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112868.1;locus_tag=RM610_RS06490;product=phage tail domain-containing protein;protein_id=WP_511575950.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1297319 1304323 . + . ID=gene-RM610_RS06495;Name=RM610_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06495;old_locus_tag=RM610_06520 NZ_JAVRJX010000001.1 Protein Homology CDS 1297319 1304323 . + 0 ID=cds-WP_311541997.1;Parent=gene-RM610_RS06495;Dbxref=GenBank:WP_311541997.1;Name=WP_311541997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085822.1;locus_tag=RM610_RS06495;product=hypothetical protein;protein_id=WP_311541997.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1304335 1304685 . + . ID=gene-RM610_RS06500;Name=RM610_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06500;old_locus_tag=RM610_06525 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1304335 1304685 . + 0 ID=cds-WP_311541998.1;Parent=gene-RM610_RS06500;Dbxref=GenBank:WP_311541998.1;Name=WP_311541998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06500;product=hypothetical protein;protein_id=WP_311541998.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1304701 1304877 . + . ID=gene-RM610_RS06505;Name=RM610_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06505;old_locus_tag=RM610_06530 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1304701 1304877 . + 0 ID=cds-WP_311541999.1;Parent=gene-RM610_RS06505;Dbxref=GenBank:WP_311541999.1;Name=WP_311541999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06505;product=hypothetical protein;protein_id=WP_311541999.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1304915 1307650 . + . ID=gene-RM610_RS06510;Name=RM610_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06510;old_locus_tag=RM610_06535 NZ_JAVRJX010000001.1 Protein Homology CDS 1304915 1307650 . + 0 ID=cds-WP_311542000.1;Parent=gene-RM610_RS06510;Dbxref=GenBank:WP_311542000.1;Name=WP_311542000.1;Ontology_term=GO:0019062,GO:0046718,GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001807370.1;locus_tag=RM610_RS06510;product=tail fiber domain-containing protein;protein_id=WP_311542000.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1307708 1308109 . + . ID=gene-RM610_RS06515;Name=RM610_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06515;old_locus_tag=RM610_06540 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1307708 1308109 . + 0 ID=cds-WP_311542001.1;Parent=gene-RM610_RS06515;Dbxref=GenBank:WP_311542001.1;Name=WP_311542001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06515;product=guided entry of tail-anchored proteins factor 1;protein_id=WP_311542001.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1308283 1308603 . + . ID=gene-RM610_RS06520;Name=RM610_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06520;old_locus_tag=RM610_06545 NZ_JAVRJX010000001.1 Protein Homology CDS 1308283 1308603 . + 0 ID=cds-WP_311542002.1;Parent=gene-RM610_RS06520;Dbxref=GenBank:WP_311542002.1;Name=WP_311542002.1;Ontology_term=GO:0140911;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: protein motif:HMM:TIGR01592.1;locus_tag=RM610_RS06520;product=phage holin;protein_id=WP_311542002.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1310056 1310193 . + . ID=gene-RM610_RS12120;Name=RM610_RS12120;end_range=1310193,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12120;partial=true;pseudo=true;start_range=.,1310056 NZ_JAVRJX010000001.1 Protein Homology CDS 1310056 1310193 . + 0 ID=cds-RM610_RS12120;Parent=gene-RM610_RS12120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1310193,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665438.1;locus_tag=RM610_RS12120;partial=true;product=BppU family phage baseplate upper protein;pseudo=true;start_range=.,1310056;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1310731 1311024 . + . ID=gene-RM610_RS12125;Name=RM610_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12125 NZ_JAVRJX010000001.1 Protein Homology CDS 1310731 1311024 . + 0 ID=cds-WP_446289378.1;Parent=gene-RM610_RS12125;Dbxref=GenBank:WP_446289378.1;Name=WP_446289378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048762.2;locus_tag=RM610_RS12125;product=phage upper tail fiber protein;protein_id=WP_446289378.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1311030 1311425 . + . ID=gene-RM610_RS06530;Name=RM610_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06530;old_locus_tag=RM610_06555 NZ_JAVRJX010000001.1 Protein Homology CDS 1311030 1311425 . + 0 ID=cds-WP_311542004.1;Parent=gene-RM610_RS06530;Dbxref=GenBank:WP_311542004.1;Name=WP_311542004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567413.1;locus_tag=RM610_RS06530;product=hypothetical protein;protein_id=WP_311542004.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1311478 1313001 . + . ID=gene-RM610_RS06535;Name=RM610_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06535;old_locus_tag=RM610_06560 NZ_JAVRJX010000001.1 Protein Homology CDS 1311478 1313001 . + 0 ID=cds-WP_311542005.1;Parent=gene-RM610_RS06535;Dbxref=GenBank:WP_311542005.1;Name=WP_311542005.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013670.7;locus_tag=RM610_RS06535;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_311542005.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1313106 1313930 . + . ID=gene-RM610_RS06540;Name=RM610_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06540;old_locus_tag=RM610_06565 NZ_JAVRJX010000001.1 Protein Homology CDS 1313106 1313930 . + 0 ID=cds-WP_311542006.1;Parent=gene-RM610_RS06540;Dbxref=GenBank:WP_311542006.1;Name=WP_311542006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025388.7;locus_tag=RM610_RS06540;product=DUF4238 domain-containing protein;protein_id=WP_311542006.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1313994 1315280 . - . ID=gene-RM610_RS06545;Name=RM610_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06545;old_locus_tag=RM610_06570 NZ_JAVRJX010000001.1 Protein Homology CDS 1313994 1315280 . - 0 ID=cds-WP_311542007.1;Parent=gene-RM610_RS06545;Dbxref=GenBank:WP_311542007.1;Name=WP_311542007.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=RM610_RS06545;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_311542007.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1315510 1315740 . - . ID=gene-RM610_RS06550;Name=RM610_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06550;old_locus_tag=RM610_06575 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1315510 1315740 . - 0 ID=cds-WP_311542008.1;Parent=gene-RM610_RS06550;Dbxref=GenBank:WP_311542008.1;Name=WP_311542008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06550;product=hypothetical protein;protein_id=WP_311542008.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1316024 1316200 . - . ID=gene-RM610_RS06555;Name=RM610_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06555;old_locus_tag=RM610_06580 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1316024 1316200 . - 0 ID=cds-WP_311542009.1;Parent=gene-RM610_RS06555;Dbxref=GenBank:WP_311542009.1;Name=WP_311542009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06555;product=hypothetical protein;protein_id=WP_311542009.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1316517 1316822 . + . ID=gene-RM610_RS06560;Name=RM610_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06560;old_locus_tag=RM610_06585 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1316517 1316822 . + 0 ID=cds-WP_311542010.1;Parent=gene-RM610_RS06560;Dbxref=GenBank:WP_311542010.1;Name=WP_311542010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06560;product=hypothetical protein;protein_id=WP_311542010.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq pseudogene 1316958 1317920 . - . ID=gene-RM610_RS06565;Name=RM610_RS06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS06565;old_locus_tag=RM610_06590;partial=true;pseudo=true;start_range=.,1316958 NZ_JAVRJX010000001.1 Protein Homology CDS 1316958 1317920 . - 0 ID=cds-RM610_RS06565;Parent=gene-RM610_RS06565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=RM610_RS06565;partial=true;product=dicarboxylate/amino acid:cation symporter;pseudo=true;start_range=.,1316958;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1318133 1320670 . - . ID=gene-RM610_RS06570;Name=RM610_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06570;old_locus_tag=RM610_06595 NZ_JAVRJX010000001.1 Protein Homology CDS 1318133 1320670 . - 0 ID=cds-WP_311542011.1;Parent=gene-RM610_RS06570;Dbxref=GenBank:WP_311542011.1;Name=WP_311542011.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021909.8;locus_tag=RM610_RS06570;product=Ig-like domain-containing protein;protein_id=WP_311542011.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1320951 1321826 . + . ID=gene-RM610_RS06575;Name=RM610_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06575;old_locus_tag=RM610_06600 NZ_JAVRJX010000001.1 Protein Homology CDS 1320951 1321826 . + 0 ID=cds-WP_107359749.1;Parent=gene-RM610_RS06575;Dbxref=GenBank:WP_107359749.1;Name=WP_107359749.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425458.1;locus_tag=RM610_RS06575;product=cation diffusion facilitator family transporter;protein_id=WP_107359749.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1322095 1322721 . - . ID=gene-RM610_RS06580;Name=RM610_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06580;old_locus_tag=RM610_06605 NZ_JAVRJX010000001.1 Protein Homology CDS 1322095 1322721 . - 0 ID=cds-WP_107370124.1;Parent=gene-RM610_RS06580;Dbxref=GenBank:WP_107370124.1;Name=WP_107370124.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443556.1;locus_tag=RM610_RS06580;product=response regulator;protein_id=WP_107370124.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1322722 1323843 . - . ID=gene-RM610_RS06585;Name=RM610_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06585;old_locus_tag=RM610_06610 NZ_JAVRJX010000001.1 Protein Homology CDS 1322722 1323843 . - 0 ID=cds-WP_107376087.1;Parent=gene-RM610_RS06585;Dbxref=GenBank:WP_107376087.1;Name=WP_107376087.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384143.1;locus_tag=RM610_RS06585;product=GAF domain-containing sensor histidine kinase;protein_id=WP_107376087.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1324057 1324887 . + . ID=gene-RM610_RS06590;Name=RM610_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06590;old_locus_tag=RM610_06615 NZ_JAVRJX010000001.1 Protein Homology CDS 1324057 1324887 . + 0 ID=cds-WP_107359746.1;Parent=gene-RM610_RS06590;Dbxref=GenBank:WP_107359746.1;Name=WP_107359746.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=RM610_RS06590;product=RluA family pseudouridine synthase;protein_id=WP_107359746.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1324926 1327088 . - . ID=gene-RM610_RS06595;Name=RM610_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06595;old_locus_tag=RM610_06620 NZ_JAVRJX010000001.1 Protein Homology CDS 1324926 1327088 . - 0 ID=cds-WP_107359745.1;Parent=gene-RM610_RS06595;Dbxref=GenBank:WP_107359745.1;Name=WP_107359745.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384147.1;locus_tag=RM610_RS06595;product=RNA degradosome polyphosphate kinase;protein_id=WP_107359745.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1327181 1328707 . - . ID=gene-RM610_RS06600;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=RM610_RS06600;old_locus_tag=RM610_06625 NZ_JAVRJX010000001.1 Protein Homology CDS 1327181 1328707 . - 0 ID=cds-WP_107381416.1;Parent=gene-RM610_RS06600;Dbxref=GenBank:WP_107381416.1;Name=WP_107381416.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302401.1;locus_tag=RM610_RS06600;product=exopolyphosphatase;protein_id=WP_107381416.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1328729 1330114 . - . ID=gene-RM610_RS06605;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=RM610_RS06605;old_locus_tag=RM610_06630 NZ_JAVRJX010000001.1 Protein Homology CDS 1328729 1330114 . - 0 ID=cds-WP_107359743.1;Parent=gene-RM610_RS06605;Dbxref=GenBank:WP_107359743.1;Name=WP_107359743.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=RM610_RS06605;product=class II fumarate hydratase;protein_id=WP_107359743.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1330259 1330669 . - . ID=gene-RM610_RS06610;Name=RM610_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06610;old_locus_tag=RM610_06635 NZ_JAVRJX010000001.1 Protein Homology CDS 1330259 1330669 . - 0 ID=cds-WP_311542012.1;Parent=gene-RM610_RS06610;Dbxref=GenBank:WP_311542012.1;Name=WP_311542012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384152.1;locus_tag=RM610_RS06610;product=hypothetical protein;protein_id=WP_311542012.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1330769 1330933 . - . ID=gene-RM610_RS06615;Name=RM610_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06615;old_locus_tag=RM610_06640 NZ_JAVRJX010000001.1 Protein Homology CDS 1330769 1330933 . - 0 ID=cds-WP_157946118.1;Parent=gene-RM610_RS06615;Dbxref=GenBank:WP_157946118.1;Name=WP_157946118.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=RM610_RS06615;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_157946118.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1330951 1331550 . - . ID=gene-RM610_RS06620;Name=RM610_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06620;old_locus_tag=RM610_06645 NZ_JAVRJX010000001.1 Protein Homology CDS 1330951 1331550 . - 0 ID=cds-WP_105986518.1;Parent=gene-RM610_RS06620;Dbxref=GenBank:WP_105986518.1;Name=WP_105986518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808097.1;locus_tag=RM610_RS06620;product=6-phosphogluconolactonase;protein_id=WP_105986518.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1331569 1332738 . - . ID=gene-RM610_RS06625;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM610_RS06625;old_locus_tag=RM610_06650 NZ_JAVRJX010000001.1 Protein Homology CDS 1331569 1332738 . - 0 ID=cds-WP_311542013.1;Parent=gene-RM610_RS06625;Dbxref=GenBank:WP_311542013.1;Name=WP_311542013.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468253.1;locus_tag=RM610_RS06625;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_311542013.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1332756 1333226 . - . ID=gene-RM610_RS06630;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=RM610_RS06630;old_locus_tag=RM610_06655 NZ_JAVRJX010000001.1 Protein Homology CDS 1332756 1333226 . - 0 ID=cds-WP_107381418.1;Parent=gene-RM610_RS06630;Dbxref=GenBank:WP_107381418.1;Name=WP_107381418.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=RM610_RS06630;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_107381418.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1333223 1334356 . - . ID=gene-RM610_RS06635;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=RM610_RS06635;old_locus_tag=RM610_06660 NZ_JAVRJX010000001.1 Protein Homology CDS 1333223 1334356 . - 0 ID=cds-WP_107381419.1;Parent=gene-RM610_RS06635;Dbxref=GenBank:WP_107381419.1;Name=WP_107381419.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364869.1;locus_tag=RM610_RS06635;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_107381419.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1334645 1335367 . - . ID=gene-RM610_RS06640;Name=RM610_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06640;old_locus_tag=RM610_06665 NZ_JAVRJX010000001.1 Protein Homology CDS 1334645 1335367 . - 0 ID=cds-WP_311542014.1;Parent=gene-RM610_RS06640;Dbxref=GenBank:WP_311542014.1;Name=WP_311542014.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638026.1;locus_tag=RM610_RS06640;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_311542014.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1335360 1336817 . - . ID=gene-RM610_RS06645;Name=RM610_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06645;old_locus_tag=RM610_06670 NZ_JAVRJX010000001.1 Protein Homology CDS 1335360 1336817 . - 0 ID=cds-WP_107359737.1;Parent=gene-RM610_RS06645;Dbxref=GenBank:WP_107359737.1;Name=WP_107359737.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164964.1;locus_tag=RM610_RS06645;product=ABC transporter substrate-binding protein/permease;protein_id=WP_107359737.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1336946 1338004 . - . ID=gene-RM610_RS06650;Name=RM610_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06650;old_locus_tag=RM610_06675 NZ_JAVRJX010000001.1 Protein Homology CDS 1336946 1338004 . - 0 ID=cds-WP_107359736.1;Parent=gene-RM610_RS06650;Dbxref=GenBank:WP_107359736.1;Name=WP_107359736.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449624.1;locus_tag=RM610_RS06650;product=PTS sugar transporter subunit IIC;protein_id=WP_107359736.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1338048 1338551 . - . ID=gene-RM610_RS06655;Name=RM610_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06655;old_locus_tag=RM610_06680 NZ_JAVRJX010000001.1 GeneMarkS-2+ CDS 1338048 1338551 . - 0 ID=cds-WP_107359735.1;Parent=gene-RM610_RS06655;Dbxref=GenBank:WP_107359735.1;Name=WP_107359735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06655;product=hypothetical protein;protein_id=WP_107359735.1;transl_table=11 NZ_JAVRJX010000001.1 RefSeq gene 1338904 1338987 . - . ID=gene-RM610_RS06660;Name=RM610_RS06660;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS06660;old_locus_tag=RM610_06685 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1338904 1338987 . - . ID=rna-RM610_RS06660;Parent=gene-RM610_RS06660;anticodon=(pos:complement(1338951..1338953));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06660;product=tRNA-Leu NZ_JAVRJX010000001.1 tRNAscan-SE exon 1338904 1338987 . - . ID=exon-RM610_RS06660-1;Parent=rna-RM610_RS06660;anticodon=(pos:complement(1338951..1338953));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06660;product=tRNA-Leu NZ_JAVRJX010000001.1 RefSeq gene 1339025 1339099 . - . ID=gene-RM610_RS06665;Name=RM610_RS06665;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS06665;old_locus_tag=RM610_06690 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1339025 1339099 . - . ID=rna-RM610_RS06665;Parent=gene-RM610_RS06665;anticodon=(pos:complement(1339064..1339066));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06665;product=tRNA-Gly NZ_JAVRJX010000001.1 tRNAscan-SE exon 1339025 1339099 . - . ID=exon-RM610_RS06665-1;Parent=rna-RM610_RS06665;anticodon=(pos:complement(1339064..1339066));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06665;product=tRNA-Gly NZ_JAVRJX010000001.1 RefSeq gene 1339123 1339197 . - . ID=gene-RM610_RS06670;Name=RM610_RS06670;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS06670;old_locus_tag=RM610_06695 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1339123 1339197 . - . ID=rna-RM610_RS06670;Parent=gene-RM610_RS06670;anticodon=(pos:complement(1339162..1339164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06670;product=tRNA-Gly NZ_JAVRJX010000001.1 tRNAscan-SE exon 1339123 1339197 . - . ID=exon-RM610_RS06670-1;Parent=rna-RM610_RS06670;anticodon=(pos:complement(1339162..1339164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06670;product=tRNA-Gly NZ_JAVRJX010000001.1 RefSeq gene 1339221 1339295 . - . ID=gene-RM610_RS06675;Name=RM610_RS06675;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS06675;old_locus_tag=RM610_06700 NZ_JAVRJX010000001.1 tRNAscan-SE tRNA 1339221 1339295 . - . ID=rna-RM610_RS06675;Parent=gene-RM610_RS06675;anticodon=(pos:complement(1339260..1339262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06675;product=tRNA-Gly NZ_JAVRJX010000001.1 tRNAscan-SE exon 1339221 1339295 . - . ID=exon-RM610_RS06675-1;Parent=rna-RM610_RS06675;anticodon=(pos:complement(1339260..1339262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS06675;product=tRNA-Gly ##sequence-region NZ_JAVRJX010000002.1 1 250180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000002.1 RefSeq region 1 250180 . + . ID=NZ_JAVRJX010000002.1:1..250180;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000002.1 RefSeq gene 701 1765 . - . ID=gene-RM610_RS06680;Name=salA;gbkey=Gene;gene=salA;gene_biotype=protein_coding;locus_tag=RM610_RS06680;old_locus_tag=RM610_06705 NZ_JAVRJX010000002.1 Protein Homology CDS 701 1765 . - 0 ID=cds-WP_107376286.1;Parent=gene-RM610_RS06680;Dbxref=GenBank:WP_107376286.1;Name=WP_107376286.1;gbkey=CDS;gene=salA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=RM610_RS06680;product=iron-sulfur carrier protein/transcriptional regulator SalA;protein_id=WP_107376286.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 1858 3294 . - . ID=gene-RM610_RS06685;Name=RM610_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06685;old_locus_tag=RM610_06710 NZ_JAVRJX010000002.1 Protein Homology CDS 1858 3294 . - 0 ID=cds-WP_311542022.1;Parent=gene-RM610_RS06685;Dbxref=GenBank:WP_311542022.1;Name=WP_311542022.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384823.1;locus_tag=RM610_RS06685;product=MDR family MFS transporter;protein_id=WP_311542022.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 3632 4099 . - . ID=gene-RM610_RS06690;Name=RM610_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06690;old_locus_tag=RM610_06715 NZ_JAVRJX010000002.1 Protein Homology CDS 3632 4099 . - 0 ID=cds-WP_037574677.1;Parent=gene-RM610_RS06690;Dbxref=GenBank:WP_037574677.1;Name=WP_037574677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426405.1;locus_tag=RM610_RS06690;product=SepA family multidrug efflux transporter;protein_id=WP_037574677.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 4140 5474 . - . ID=gene-RM610_RS06695;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=RM610_RS06695;old_locus_tag=RM610_06720 NZ_JAVRJX010000002.1 Protein Homology CDS 4140 5474 . - 0 ID=cds-WP_311542023.1;Parent=gene-RM610_RS06695;Dbxref=GenBank:WP_311542023.1;Name=WP_311542023.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482666.1;locus_tag=RM610_RS06695;product=multidrug efflux MFS transporter SdrM;protein_id=WP_311542023.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 5577 5777 . - . ID=gene-RM610_RS06700;Name=RM610_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06700;old_locus_tag=RM610_06725 NZ_JAVRJX010000002.1 Protein Homology CDS 5577 5777 . - 0 ID=cds-WP_105986367.1;Parent=gene-RM610_RS06700;Dbxref=GenBank:WP_105986367.1;Name=WP_105986367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168474.1;locus_tag=RM610_RS06700;product=hypothetical protein;protein_id=WP_105986367.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 5787 6473 . - . ID=gene-RM610_RS06705;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=RM610_RS06705;old_locus_tag=RM610_06730 NZ_JAVRJX010000002.1 Protein Homology CDS 5787 6473 . - 0 ID=cds-WP_107358536.1;Parent=gene-RM610_RS06705;Dbxref=GenBank:WP_107358536.1;Name=WP_107358536.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=RM610_RS06705;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_107358536.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 6484 7674 . - . ID=gene-RM610_RS06710;Name=RM610_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06710;old_locus_tag=RM610_06735 NZ_JAVRJX010000002.1 Protein Homology CDS 6484 7674 . - 0 ID=cds-WP_107375474.1;Parent=gene-RM610_RS06710;Dbxref=GenBank:WP_107375474.1;Name=WP_107375474.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165085.1;locus_tag=RM610_RS06710;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_107375474.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 7725 8228 . - . ID=gene-RM610_RS06715;Name=RM610_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06715;old_locus_tag=RM610_06740 NZ_JAVRJX010000002.1 Protein Homology CDS 7725 8228 . - 0 ID=cds-WP_105986364.1;Parent=gene-RM610_RS06715;Dbxref=GenBank:WP_105986364.1;Name=WP_105986364.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=RM610_RS06715;product=metal-dependent hydrolase;protein_id=WP_105986364.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 8416 8676 . + . ID=gene-RM610_RS06720;Name=RM610_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06720;old_locus_tag=RM610_06745 NZ_JAVRJX010000002.1 Protein Homology CDS 8416 8676 . + 0 ID=cds-WP_037574694.1;Parent=gene-RM610_RS06720;Dbxref=GenBank:WP_037574694.1;Name=WP_037574694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500896.1;locus_tag=RM610_RS06720;product=SunI/YnzG family protein;protein_id=WP_037574694.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 8778 9740 . - . ID=gene-RM610_RS06725;Name=RM610_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06725;old_locus_tag=RM610_06750 NZ_JAVRJX010000002.1 Protein Homology CDS 8778 9740 . - 0 ID=cds-WP_107375475.1;Parent=gene-RM610_RS06725;Dbxref=GenBank:WP_107375475.1;Name=WP_107375475.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384837.1;locus_tag=RM610_RS06725;product=FecCD family ABC transporter permease;protein_id=WP_107375475.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 9737 10762 . - . ID=gene-RM610_RS06730;Name=RM610_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06730;old_locus_tag=RM610_06755 NZ_JAVRJX010000002.1 Protein Homology CDS 9737 10762 . - 0 ID=cds-WP_107381639.1;Parent=gene-RM610_RS06730;Dbxref=GenBank:WP_107381639.1;Name=WP_107381639.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384839.1;locus_tag=RM610_RS06730;product=FecCD family ABC transporter permease;protein_id=WP_107381639.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 10808 11785 . - . ID=gene-RM610_RS06735;Name=RM610_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06735;old_locus_tag=RM610_06760 NZ_JAVRJX010000002.1 Protein Homology CDS 10808 11785 . - 0 ID=cds-WP_311542086.1;Parent=gene-RM610_RS06735;Dbxref=GenBank:WP_311542086.1;Name=WP_311542086.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722966.1;locus_tag=RM610_RS06735;product=ABC transporter substrate-binding protein;protein_id=WP_311542086.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 11859 12929 . - . ID=gene-RM610_RS06740;Name=RM610_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06740;old_locus_tag=RM610_06765 NZ_JAVRJX010000002.1 Protein Homology CDS 11859 12929 . - 0 ID=cds-WP_311542024.1;Parent=gene-RM610_RS06740;Dbxref=GenBank:WP_311542024.1;Name=WP_311542024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=RM610_RS06740;product=alanine racemase;protein_id=WP_311542024.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 12933 14696 . - . ID=gene-RM610_RS06745;Name=RM610_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06745;old_locus_tag=RM610_06770 NZ_JAVRJX010000002.1 Protein Homology CDS 12933 14696 . - 0 ID=cds-WP_311542025.1;Parent=gene-RM610_RS06745;Dbxref=GenBank:WP_311542025.1;Name=WP_311542025.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=RM610_RS06745;product=IucA/IucC family protein;protein_id=WP_311542025.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 14698 15864 . - . ID=gene-RM610_RS06750;Name=RM610_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06750;old_locus_tag=RM610_06775 NZ_JAVRJX010000002.1 Protein Homology CDS 14698 15864 . - 0 ID=cds-WP_107370079.1;Parent=gene-RM610_RS06750;Dbxref=GenBank:WP_107370079.1;Name=WP_107370079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302621.1;locus_tag=RM610_RS06750;product=MFS transporter;protein_id=WP_107370079.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 15966 17912 . + . ID=gene-RM610_RS06755;Name=RM610_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06755;old_locus_tag=RM610_06780 NZ_JAVRJX010000002.1 Protein Homology CDS 15966 17912 . + 0 ID=cds-WP_311542026.1;Parent=gene-RM610_RS06755;Dbxref=GenBank:WP_311542026.1;Name=WP_311542026.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432557.1;locus_tag=RM610_RS06755;product=IucA/IucC family protein;protein_id=WP_311542026.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 18052 19203 . + . ID=gene-RM610_RS06760;Name=RM610_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06760;old_locus_tag=RM610_06785 NZ_JAVRJX010000002.1 Protein Homology CDS 18052 19203 . + 0 ID=cds-WP_107375479.1;Parent=gene-RM610_RS06760;Dbxref=GenBank:WP_107375479.1;Name=WP_107375479.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426390.1;locus_tag=RM610_RS06760;product=MFS transporter;protein_id=WP_107375479.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 19262 19591 . - . ID=gene-RM610_RS06765;Name=RM610_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06765;old_locus_tag=RM610_06790 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 19262 19591 . - 0 ID=cds-WP_107381795.1;Parent=gene-RM610_RS06765;Dbxref=GenBank:WP_107381795.1;Name=WP_107381795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS06765;product=hypothetical protein;protein_id=WP_107381795.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 19864 21381 . - . ID=gene-RM610_RS06770;Name=RM610_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06770;old_locus_tag=RM610_06795 NZ_JAVRJX010000002.1 Protein Homology CDS 19864 21381 . - 0 ID=cds-WP_107381545.1;Parent=gene-RM610_RS06770;Dbxref=GenBank:WP_107381545.1;Name=WP_107381545.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426386.1;locus_tag=RM610_RS06770;product=BCCT family transporter;protein_id=WP_107381545.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 21459 22466 . - . ID=gene-RM610_RS06775;Name=RM610_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06775;old_locus_tag=RM610_06800 NZ_JAVRJX010000002.1 Protein Homology CDS 21459 22466 . - 0 ID=cds-WP_107370084.1;Parent=gene-RM610_RS06775;Dbxref=GenBank:WP_107370084.1;Name=WP_107370084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=RM610_RS06775;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_107370084.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 22731 24134 . - . ID=gene-RM610_RS06780;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=RM610_RS06780;old_locus_tag=RM610_06805 NZ_JAVRJX010000002.1 Protein Homology CDS 22731 24134 . - 0 ID=cds-WP_107370085.1;Parent=gene-RM610_RS06780;Dbxref=GenBank:WP_107370085.1;Name=WP_107370085.1;Ontology_term=GO:0005990,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275160.1;locus_tag=RM610_RS06780;product=6-phospho-beta-galactosidase;protein_id=WP_107370085.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 24150 25898 . - . ID=gene-RM610_RS06785;Name=RM610_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06785;old_locus_tag=RM610_06810 NZ_JAVRJX010000002.1 Protein Homology CDS 24150 25898 . - 0 ID=cds-WP_185958007.1;Parent=gene-RM610_RS06785;Dbxref=GenBank:WP_185958007.1;Name=WP_185958007.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=RM610_RS06785;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_185958007.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 25904 26218 . - . ID=gene-RM610_RS06790;Name=RM610_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06790;old_locus_tag=RM610_06815 NZ_JAVRJX010000002.1 Protein Homology CDS 25904 26218 . - 0 ID=cds-WP_037574730.1;Parent=gene-RM610_RS06790;Dbxref=GenBank:WP_037574730.1;Name=WP_037574730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=RM610_RS06790;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_037574730.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 26249 27220 . - . ID=gene-RM610_RS06795;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=RM610_RS06795;old_locus_tag=RM610_06820 NZ_JAVRJX010000002.1 Protein Homology CDS 26249 27220 . - 0 ID=cds-WP_107358523.1;Parent=gene-RM610_RS06795;Dbxref=GenBank:WP_107358523.1;Name=WP_107358523.1;Ontology_term=GO:0005990,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=RM610_RS06795;product=tagatose-bisphosphate aldolase;protein_id=WP_107358523.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 27323 27838 . - . ID=gene-RM610_RS06800;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=RM610_RS06800;old_locus_tag=RM610_06825 NZ_JAVRJX010000002.1 Protein Homology CDS 27323 27838 . - 0 ID=cds-WP_037574736.1;Parent=gene-RM610_RS06800;Dbxref=GenBank:WP_037574736.1;Name=WP_037574736.1;Ontology_term=GO:0005990,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=RM610_RS06800;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_037574736.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 27854 28282 . - . ID=gene-RM610_RS06805;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=RM610_RS06805;old_locus_tag=RM610_06830 NZ_JAVRJX010000002.1 Protein Homology CDS 27854 28282 . - 0 ID=cds-WP_105986352.1;Parent=gene-RM610_RS06805;Dbxref=GenBank:WP_105986352.1;Name=WP_105986352.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=RM610_RS06805;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_105986352.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 28522 29274 . - . ID=gene-RM610_RS06810;Name=RM610_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06810;old_locus_tag=RM610_06835 NZ_JAVRJX010000002.1 Protein Homology CDS 28522 29274 . - 0 ID=cds-WP_037574742.1;Parent=gene-RM610_RS06810;Dbxref=GenBank:WP_037574742.1;Name=WP_037574742.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=RM610_RS06810;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037574742.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 29573 29965 . - . ID=gene-RM610_RS06815;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=RM610_RS06815;old_locus_tag=RM610_06840 NZ_JAVRJX010000002.1 Protein Homology CDS 29573 29965 . - 0 ID=cds-WP_002460040.1;Parent=gene-RM610_RS06815;Dbxref=GenBank:WP_002460040.1;Name=WP_002460040.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=RM610_RS06815;product=30S ribosomal protein S9;protein_id=WP_002460040.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 29985 30422 . - . ID=gene-RM610_RS06820;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=RM610_RS06820;old_locus_tag=RM610_06845 NZ_JAVRJX010000002.1 Protein Homology CDS 29985 30422 . - 0 ID=cds-WP_037574745.1;Parent=gene-RM610_RS06820;Dbxref=GenBank:WP_037574745.1;Name=WP_037574745.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=RM610_RS06820;product=50S ribosomal protein L13;protein_id=WP_037574745.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 30611 31441 . - . ID=gene-RM610_RS06825;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=RM610_RS06825;old_locus_tag=RM610_06850 NZ_JAVRJX010000002.1 Protein Homology CDS 30611 31441 . - 0 ID=cds-WP_107358522.1;Parent=gene-RM610_RS06825;Dbxref=GenBank:WP_107358522.1;Name=WP_107358522.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506990.1;locus_tag=RM610_RS06825;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_107358522.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 31456 32259 . - . ID=gene-RM610_RS06830;Name=RM610_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06830;old_locus_tag=RM610_06855 NZ_JAVRJX010000002.1 Protein Homology CDS 31456 32259 . - 0 ID=cds-WP_107375487.1;Parent=gene-RM610_RS06830;Dbxref=GenBank:WP_107375487.1;Name=WP_107375487.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638503.1;locus_tag=RM610_RS06830;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_107375487.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 32249 33115 . - . ID=gene-RM610_RS06835;Name=RM610_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06835;old_locus_tag=RM610_06860 NZ_JAVRJX010000002.1 Protein Homology CDS 32249 33115 . - 0 ID=cds-WP_107358520.1;Parent=gene-RM610_RS06835;Dbxref=GenBank:WP_107358520.1;Name=WP_107358520.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167911.1;locus_tag=RM610_RS06835;product=energy-coupling factor transporter ATPase;protein_id=WP_107358520.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 33112 33915 . - . ID=gene-RM610_RS06840;Name=RM610_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06840;old_locus_tag=RM610_06865 NZ_JAVRJX010000002.1 Protein Homology CDS 33112 33915 . - 0 ID=cds-WP_107358519.1;Parent=gene-RM610_RS06840;Dbxref=GenBank:WP_107358519.1;Name=WP_107358519.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506987.1;locus_tag=RM610_RS06840;product=energy-coupling factor transporter ATPase;protein_id=WP_107358519.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 34283 34651 . - . ID=gene-RM610_RS06845;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=RM610_RS06845;old_locus_tag=RM610_06870 NZ_JAVRJX010000002.1 Protein Homology CDS 34283 34651 . - 0 ID=cds-WP_037574759.1;Parent=gene-RM610_RS06845;Dbxref=GenBank:WP_037574759.1;Name=WP_037574759.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=RM610_RS06845;product=50S ribosomal protein L17;protein_id=WP_037574759.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 34668 35612 . - . ID=gene-RM610_RS06850;Name=RM610_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06850;old_locus_tag=RM610_06875 NZ_JAVRJX010000002.1 Protein Homology CDS 34668 35612 . - 0 ID=cds-WP_037574762.1;Parent=gene-RM610_RS06850;Dbxref=GenBank:WP_037574762.1;Name=WP_037574762.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=RM610_RS06850;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_037574762.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 35696 36085 . - . ID=gene-RM610_RS06855;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=RM610_RS06855;old_locus_tag=RM610_06880 NZ_JAVRJX010000002.1 Protein Homology CDS 35696 36085 . - 0 ID=cds-WP_014613235.1;Parent=gene-RM610_RS06855;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=RM610_RS06855;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 36110 36475 . - . ID=gene-RM610_RS06860;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=RM610_RS06860;old_locus_tag=RM610_06885 NZ_JAVRJX010000002.1 Protein Homology CDS 36110 36475 . - 0 ID=cds-WP_037574765.1;Parent=gene-RM610_RS06860;Dbxref=GenBank:WP_037574765.1;Name=WP_037574765.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=RM610_RS06860;product=30S ribosomal protein S13;protein_id=WP_037574765.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 36498 36611 . - . ID=gene-RM610_RS06865;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=RM610_RS06865;old_locus_tag=RM610_06890 NZ_JAVRJX010000002.1 Protein Homology CDS 36498 36611 . - 0 ID=cds-WP_002509257.1;Parent=gene-RM610_RS06865;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=RM610_RS06865;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 36644 36862 . - . ID=gene-RM610_RS06870;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=RM610_RS06870;old_locus_tag=RM610_06895 NZ_JAVRJX010000002.1 Protein Homology CDS 36644 36862 . - 0 ID=cds-WP_001118443.1;Parent=gene-RM610_RS06870;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=RM610_RS06870;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 37030 37680 . - . ID=gene-RM610_RS06875;Name=RM610_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06875;old_locus_tag=RM610_06900 NZ_JAVRJX010000002.1 Protein Homology CDS 37030 37680 . - 0 ID=cds-WP_037574768.1;Parent=gene-RM610_RS06875;Dbxref=GenBank:WP_037574768.1;Name=WP_037574768.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448556.1;locus_tag=RM610_RS06875;product=adenylate kinase;protein_id=WP_037574768.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 37698 38990 . - . ID=gene-RM610_RS06880;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=RM610_RS06880;old_locus_tag=RM610_06905 NZ_JAVRJX010000002.1 Protein Homology CDS 37698 38990 . - 0 ID=cds-WP_037574771.1;Parent=gene-RM610_RS06880;Dbxref=GenBank:WP_037574771.1;Name=WP_037574771.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=RM610_RS06880;product=preprotein translocase subunit SecY;protein_id=WP_037574771.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 38990 39430 . - . ID=gene-RM610_RS06885;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=RM610_RS06885;old_locus_tag=RM610_06910 NZ_JAVRJX010000002.1 Protein Homology CDS 38990 39430 . - 0 ID=cds-WP_107358518.1;Parent=gene-RM610_RS06885;Dbxref=GenBank:WP_107358518.1;Name=WP_107358518.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=RM610_RS06885;product=50S ribosomal protein L15;protein_id=WP_107358518.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 39447 39626 . - . ID=gene-RM610_RS06890;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=RM610_RS06890;old_locus_tag=RM610_06915 NZ_JAVRJX010000002.1 Protein Homology CDS 39447 39626 . - 0 ID=cds-WP_037574776.1;Parent=gene-RM610_RS06890;Dbxref=GenBank:WP_037574776.1;Name=WP_037574776.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=RM610_RS06890;product=50S ribosomal protein L30;protein_id=WP_037574776.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 39644 40144 . - . ID=gene-RM610_RS06895;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=RM610_RS06895;old_locus_tag=RM610_06920 NZ_JAVRJX010000002.1 Protein Homology CDS 39644 40144 . - 0 ID=cds-WP_037574777.1;Parent=gene-RM610_RS06895;Dbxref=GenBank:WP_037574777.1;Name=WP_037574777.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=RM610_RS06895;product=30S ribosomal protein S5;protein_id=WP_037574777.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 40166 40525 . - . ID=gene-RM610_RS06900;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=RM610_RS06900;old_locus_tag=RM610_06925 NZ_JAVRJX010000002.1 Protein Homology CDS 40166 40525 . - 0 ID=cds-WP_037574779.1;Parent=gene-RM610_RS06900;Dbxref=GenBank:WP_037574779.1;Name=WP_037574779.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500963.1;locus_tag=RM610_RS06900;product=50S ribosomal protein L18;protein_id=WP_037574779.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 40556 41092 . - . ID=gene-RM610_RS06905;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=RM610_RS06905;old_locus_tag=RM610_06930 NZ_JAVRJX010000002.1 Protein Homology CDS 40556 41092 . - 0 ID=cds-WP_037567123.1;Parent=gene-RM610_RS06905;Dbxref=GenBank:WP_037567123.1;Name=WP_037567123.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=RM610_RS06905;product=50S ribosomal protein L6;protein_id=WP_037567123.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 41122 41520 . - . ID=gene-RM610_RS06910;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=RM610_RS06910;old_locus_tag=RM610_06935 NZ_JAVRJX010000002.1 Protein Homology CDS 41122 41520 . - 0 ID=cds-WP_037574781.1;Parent=gene-RM610_RS06910;Dbxref=GenBank:WP_037574781.1;Name=WP_037574781.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=RM610_RS06910;product=30S ribosomal protein S8;protein_id=WP_037574781.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 41552 41737 . - . ID=gene-RM610_RS06915;Name=RM610_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06915;old_locus_tag=RM610_06940 NZ_JAVRJX010000002.1 Protein Homology CDS 41552 41737 . - 0 ID=cds-WP_037574783.1;Parent=gene-RM610_RS06915;Dbxref=GenBank:WP_037574783.1;Name=WP_037574783.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=RM610_RS06915;product=type Z 30S ribosomal protein S14;protein_id=WP_037574783.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 41759 42298 . - . ID=gene-RM610_RS06920;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=RM610_RS06920;old_locus_tag=RM610_06945 NZ_JAVRJX010000002.1 Protein Homology CDS 41759 42298 . - 0 ID=cds-WP_037574785.1;Parent=gene-RM610_RS06920;Dbxref=GenBank:WP_037574785.1;Name=WP_037574785.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=RM610_RS06920;product=50S ribosomal protein L5;protein_id=WP_037574785.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 42323 42640 . - . ID=gene-RM610_RS06925;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=RM610_RS06925;old_locus_tag=RM610_06950 NZ_JAVRJX010000002.1 Protein Homology CDS 42323 42640 . - 0 ID=cds-WP_037567116.1;Parent=gene-RM610_RS06925;Dbxref=GenBank:WP_037567116.1;Name=WP_037567116.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911103.1;locus_tag=RM610_RS06925;product=50S ribosomal protein L24;protein_id=WP_037567116.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 42679 43047 . - . ID=gene-RM610_RS06930;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=RM610_RS06930;old_locus_tag=RM610_06955 NZ_JAVRJX010000002.1 Protein Homology CDS 42679 43047 . - 0 ID=cds-WP_014613222.1;Parent=gene-RM610_RS06930;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=RM610_RS06930;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 43078 43341 . - . ID=gene-RM610_RS06935;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=RM610_RS06935;old_locus_tag=RM610_06960 NZ_JAVRJX010000002.1 Protein Homology CDS 43078 43341 . - 0 ID=cds-WP_037567114.1;Parent=gene-RM610_RS06935;Dbxref=GenBank:WP_037567114.1;Name=WP_037567114.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=RM610_RS06935;product=30S ribosomal protein S17;protein_id=WP_037567114.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 43366 43575 . - . ID=gene-RM610_RS06940;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=RM610_RS06940;old_locus_tag=RM610_06965 NZ_JAVRJX010000002.1 Protein Homology CDS 43366 43575 . - 0 ID=cds-WP_014613220.1;Parent=gene-RM610_RS06940;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=RM610_RS06940;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 43565 43999 . - . ID=gene-RM610_RS06945;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=RM610_RS06945;old_locus_tag=RM610_06970 NZ_JAVRJX010000002.1 Protein Homology CDS 43565 43999 . - 0 ID=cds-WP_037567112.1;Parent=gene-RM610_RS06945;Dbxref=GenBank:WP_037567112.1;Name=WP_037567112.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=RM610_RS06945;product=50S ribosomal protein L16;protein_id=WP_037567112.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 44002 44655 . - . ID=gene-RM610_RS06950;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=RM610_RS06950;old_locus_tag=RM610_06975 NZ_JAVRJX010000002.1 Protein Homology CDS 44002 44655 . - 0 ID=cds-WP_037574787.1;Parent=gene-RM610_RS06950;Dbxref=GenBank:WP_037574787.1;Name=WP_037574787.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=RM610_RS06950;product=30S ribosomal protein S3;protein_id=WP_037574787.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 44678 45031 . - . ID=gene-RM610_RS06955;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=RM610_RS06955;old_locus_tag=RM610_06980 NZ_JAVRJX010000002.1 Protein Homology CDS 44678 45031 . - 0 ID=cds-WP_037574789.1;Parent=gene-RM610_RS06955;Dbxref=GenBank:WP_037574789.1;Name=WP_037574789.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=RM610_RS06955;product=50S ribosomal protein L22;protein_id=WP_037574789.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 45058 45336 . - . ID=gene-RM610_RS06960;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=RM610_RS06960;old_locus_tag=RM610_06985 NZ_JAVRJX010000002.1 Protein Homology CDS 45058 45336 . - 0 ID=cds-WP_014613216.1;Parent=gene-RM610_RS06960;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=RM610_RS06960;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 45401 46234 . - . ID=gene-RM610_RS06965;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=RM610_RS06965;old_locus_tag=RM610_06990 NZ_JAVRJX010000002.1 Protein Homology CDS 45401 46234 . - 0 ID=cds-WP_105986345.1;Parent=gene-RM610_RS06965;Dbxref=GenBank:WP_105986345.1;Name=WP_105986345.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=RM610_RS06965;product=50S ribosomal protein L2;protein_id=WP_105986345.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 46264 46539 . - . ID=gene-RM610_RS06970;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=RM610_RS06970;old_locus_tag=RM610_06995 NZ_JAVRJX010000002.1 Protein Homology CDS 46264 46539 . - 0 ID=cds-WP_037567103.1;Parent=gene-RM610_RS06970;Dbxref=GenBank:WP_037567103.1;Name=WP_037567103.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=RM610_RS06970;product=50S ribosomal protein L23;protein_id=WP_037567103.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 46539 47162 . - . ID=gene-RM610_RS06975;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=RM610_RS06975;old_locus_tag=RM610_07000 NZ_JAVRJX010000002.1 Protein Homology CDS 46539 47162 . - 0 ID=cds-WP_037574793.1;Parent=gene-RM610_RS06975;Dbxref=GenBank:WP_037574793.1;Name=WP_037574793.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=RM610_RS06975;product=50S ribosomal protein L4;protein_id=WP_037574793.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 47189 47848 . - . ID=gene-RM610_RS06980;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=RM610_RS06980;old_locus_tag=RM610_07005 NZ_JAVRJX010000002.1 Protein Homology CDS 47189 47848 . - 0 ID=cds-WP_107358516.1;Parent=gene-RM610_RS06980;Dbxref=GenBank:WP_107358516.1;Name=WP_107358516.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=RM610_RS06980;product=50S ribosomal protein L3;protein_id=WP_107358516.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 47876 48184 . - . ID=gene-RM610_RS06985;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=RM610_RS06985;old_locus_tag=RM610_07010 NZ_JAVRJX010000002.1 Protein Homology CDS 47876 48184 . - 0 ID=cds-WP_001118667.1;Parent=gene-RM610_RS06985;Dbxref=GenBank:WP_001118667.1;Name=WP_001118667.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=RM610_RS06985;product=30S ribosomal protein S10;protein_id=WP_001118667.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 48643 49977 . - . ID=gene-RM610_RS06990;Name=RM610_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06990;old_locus_tag=RM610_07015 NZ_JAVRJX010000002.1 Protein Homology CDS 48643 49977 . - 0 ID=cds-WP_311542027.1;Parent=gene-RM610_RS06990;Dbxref=GenBank:WP_311542027.1;Name=WP_311542027.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=RM610_RS06990;product=NCS2 family permease;protein_id=WP_311542027.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 50089 52221 . - . ID=gene-RM610_RS06995;Name=RM610_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS06995;old_locus_tag=RM610_07020 NZ_JAVRJX010000002.1 Protein Homology CDS 50089 52221 . - 0 ID=cds-WP_311542028.1;Parent=gene-RM610_RS06995;Dbxref=GenBank:WP_311542028.1;Name=WP_311542028.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838504.1;locus_tag=RM610_RS06995;product=DNA topoisomerase III;protein_id=WP_311542028.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 52343 53203 . + . ID=gene-RM610_RS07000;Name=RM610_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07000;old_locus_tag=RM610_07025 NZ_JAVRJX010000002.1 Protein Homology CDS 52343 53203 . + 0 ID=cds-WP_037574801.1;Parent=gene-RM610_RS07000;Dbxref=GenBank:WP_037574801.1;Name=WP_037574801.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=RM610_RS07000;product=GNAT family N-acetyltransferase;protein_id=WP_037574801.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 53242 54156 . - . ID=gene-RM610_RS07005;Name=RM610_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07005;old_locus_tag=RM610_07030 NZ_JAVRJX010000002.1 Protein Homology CDS 53242 54156 . - 0 ID=cds-WP_037574803.1;Parent=gene-RM610_RS07005;Dbxref=GenBank:WP_037574803.1;Name=WP_037574803.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488634.1;locus_tag=RM610_RS07005;product=AEC family transporter;protein_id=WP_037574803.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 54283 54456 . + . ID=gene-RM610_RS07010;Name=RM610_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07010;old_locus_tag=RM610_07035 NZ_JAVRJX010000002.1 Protein Homology CDS 54283 54456 . + 0 ID=cds-WP_169301477.1;Parent=gene-RM610_RS07010;Dbxref=GenBank:WP_169301477.1;Name=WP_169301477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500988.1;locus_tag=RM610_RS07010;product=SE1832 family protein;protein_id=WP_169301477.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 54499 54816 . + . ID=gene-RM610_RS07015;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=RM610_RS07015;old_locus_tag=RM610_07040 NZ_JAVRJX010000002.1 Protein Homology CDS 54499 54816 . + 0 ID=cds-WP_037574805.1;Parent=gene-RM610_RS07015;Dbxref=GenBank:WP_037574805.1;Name=WP_037574805.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=RM610_RS07015;product=membrane stabilizing protein MspA;protein_id=WP_037574805.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 54883 56034 . - . ID=gene-RM610_RS07020;Name=RM610_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07020;old_locus_tag=RM610_07045 NZ_JAVRJX010000002.1 Protein Homology CDS 54883 56034 . - 0 ID=cds-WP_311542029.1;Parent=gene-RM610_RS07020;Dbxref=GenBank:WP_311542029.1;Name=WP_311542029.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723795.1;locus_tag=RM610_RS07020;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311542029.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 56280 59435 . - . ID=gene-RM610_RS07025;Name=RM610_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07025;old_locus_tag=RM610_07050 NZ_JAVRJX010000002.1 Protein Homology CDS 56280 59435 . - 0 ID=cds-WP_107519288.1;Parent=gene-RM610_RS07025;Dbxref=GenBank:WP_107519288.1;Name=WP_107519288.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=RM610_RS07025;product=efflux RND transporter permease subunit;protein_id=WP_107519288.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 59818 61068 . - . ID=gene-RM610_RS07030;Name=RM610_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07030;old_locus_tag=RM610_07055 NZ_JAVRJX010000002.1 Protein Homology CDS 59818 61068 . - 0 ID=cds-WP_105986337.1;Parent=gene-RM610_RS07030;Dbxref=GenBank:WP_105986337.1;Name=WP_105986337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506953.1;locus_tag=RM610_RS07030;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_105986337.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 61178 61432 . + . ID=gene-RM610_RS07035;Name=RM610_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07035;old_locus_tag=RM610_07060 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 61178 61432 . + 0 ID=cds-WP_107358509.1;Parent=gene-RM610_RS07035;Dbxref=GenBank:WP_107358509.1;Name=WP_107358509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07035;product=hypothetical protein;protein_id=WP_107358509.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 61423 62190 . - . ID=gene-RM610_RS07040;Name=RM610_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07040;old_locus_tag=RM610_07065 NZ_JAVRJX010000002.1 Protein Homology CDS 61423 62190 . - 0 ID=cds-WP_107369944.1;Parent=gene-RM610_RS07040;Dbxref=GenBank:WP_107369944.1;Name=WP_107369944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169683.1;locus_tag=RM610_RS07040;product=VOC family protein;protein_id=WP_107369944.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 62417 62860 . + . ID=gene-RM610_RS07045;Name=RM610_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07045;old_locus_tag=RM610_07070 NZ_JAVRJX010000002.1 Protein Homology CDS 62417 62860 . + 0 ID=cds-WP_105986334.1;Parent=gene-RM610_RS07045;Dbxref=GenBank:WP_105986334.1;Name=WP_105986334.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169682.1;locus_tag=RM610_RS07045;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_105986334.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 63067 64899 . + . ID=gene-RM610_RS07050;Name=RM610_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07050;old_locus_tag=RM610_07075 NZ_JAVRJX010000002.1 Protein Homology CDS 63067 64899 . + 0 ID=cds-WP_311542030.1;Parent=gene-RM610_RS07050;Dbxref=GenBank:WP_311542030.1;Name=WP_311542030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511703.1;locus_tag=RM610_RS07050;product=DUF8508 domain-containing protein;protein_id=WP_311542030.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 65460 66482 . - . ID=gene-RM610_RS07055;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=RM610_RS07055;old_locus_tag=RM610_07080 NZ_JAVRJX010000002.1 Protein Homology CDS 65460 66482 . - 0 ID=cds-WP_107358506.1;Parent=gene-RM610_RS07055;Dbxref=GenBank:WP_107358506.1;Name=WP_107358506.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=RM610_RS07055;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_107358506.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 66497 67105 . - . ID=gene-RM610_RS07060;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=RM610_RS07060;old_locus_tag=RM610_07085 NZ_JAVRJX010000002.1 Protein Homology CDS 66497 67105 . - 0 ID=cds-WP_107358505.1;Parent=gene-RM610_RS07060;Dbxref=GenBank:WP_107358505.1;Name=WP_107358505.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509294.1;locus_tag=RM610_RS07060;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_107358505.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 67115 67348 . - . ID=gene-RM610_RS07065;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=RM610_RS07065;old_locus_tag=RM610_07090 NZ_JAVRJX010000002.1 Protein Homology CDS 67115 67348 . - 0 ID=cds-WP_107358504.1;Parent=gene-RM610_RS07065;Dbxref=GenBank:WP_107358504.1;Name=WP_107358504.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=RM610_RS07065;product=molybdopterin converting factor subunit 1;protein_id=WP_107358504.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 67345 67797 . - . ID=gene-RM610_RS07070;Name=RM610_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07070;old_locus_tag=RM610_07095 NZ_JAVRJX010000002.1 Protein Homology CDS 67345 67797 . - 0 ID=cds-WP_107358503.1;Parent=gene-RM610_RS07070;Dbxref=GenBank:WP_107358503.1;Name=WP_107358503.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506945.1;locus_tag=RM610_RS07070;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_107358503.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 67799 68278 . - . ID=gene-RM610_RS07075;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=RM610_RS07075;old_locus_tag=RM610_07100 NZ_JAVRJX010000002.1 Protein Homology CDS 67799 68278 . - 0 ID=cds-WP_105986328.1;Parent=gene-RM610_RS07075;Dbxref=GenBank:WP_105986328.1;Name=WP_105986328.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479599.1;locus_tag=RM610_RS07075;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_105986328.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 68275 69534 . - . ID=gene-RM610_RS07080;Name=RM610_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07080;old_locus_tag=RM610_07105 NZ_JAVRJX010000002.1 Protein Homology CDS 68275 69534 . - 0 ID=cds-WP_311542031.1;Parent=gene-RM610_RS07080;Dbxref=GenBank:WP_311542031.1;Name=WP_311542031.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453803.1;locus_tag=RM610_RS07080;product=molybdopterin molybdotransferase MoeA;protein_id=WP_311542031.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 69603 70085 . + . ID=gene-RM610_RS07085;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=RM610_RS07085;old_locus_tag=RM610_07110 NZ_JAVRJX010000002.1 Protein Homology CDS 69603 70085 . + 0 ID=cds-WP_037574834.1;Parent=gene-RM610_RS07085;Dbxref=GenBank:WP_037574834.1;Name=WP_037574834.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722900.1;locus_tag=RM610_RS07085;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_037574834.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 70168 70668 . - . ID=gene-RM610_RS07090;Name=RM610_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07090;old_locus_tag=RM610_07115 NZ_JAVRJX010000002.1 Protein Homology CDS 70168 70668 . - 0 ID=cds-WP_311542032.1;Parent=gene-RM610_RS07090;Dbxref=GenBank:WP_311542032.1;Name=WP_311542032.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382827.1;locus_tag=RM610_RS07090;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_311542032.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 70681 71685 . - . ID=gene-RM610_RS07095;Name=RM610_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07095;old_locus_tag=RM610_07120 NZ_JAVRJX010000002.1 Protein Homology CDS 70681 71685 . - 0 ID=cds-WP_107358500.1;Parent=gene-RM610_RS07095;Dbxref=GenBank:WP_107358500.1;Name=WP_107358500.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453805.1;locus_tag=RM610_RS07095;product=ThiF family adenylyltransferase;protein_id=WP_107358500.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 71892 72518 . - . ID=gene-RM610_RS07100;Name=RM610_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07100;old_locus_tag=RM610_07125 NZ_JAVRJX010000002.1 Protein Homology CDS 71892 72518 . - 0 ID=cds-WP_107369937.1;Parent=gene-RM610_RS07100;Dbxref=GenBank:WP_107369937.1;Name=WP_107369937.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=RM610_RS07100;product=ATP-binding cassette domain-containing protein;protein_id=WP_107369937.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 72519 73190 . - . ID=gene-RM610_RS07105;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=RM610_RS07105;old_locus_tag=RM610_07130 NZ_JAVRJX010000002.1 Protein Homology CDS 72519 73190 . - 0 ID=cds-WP_107358498.1;Parent=gene-RM610_RS07105;Dbxref=GenBank:WP_107358498.1;Name=WP_107358498.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113094.1;locus_tag=RM610_RS07105;product=molybdate ABC transporter permease subunit;protein_id=WP_107358498.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 73199 73972 . - . ID=gene-RM610_RS07110;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=RM610_RS07110;old_locus_tag=RM610_07135 NZ_JAVRJX010000002.1 Protein Homology CDS 73199 73972 . - 0 ID=cds-WP_311542033.1;Parent=gene-RM610_RS07110;Dbxref=GenBank:WP_311542033.1;Name=WP_311542033.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426321.1;locus_tag=RM610_RS07110;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_311542033.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 74161 74958 . + . ID=gene-RM610_RS07115;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=RM610_RS07115;old_locus_tag=RM610_07140 NZ_JAVRJX010000002.1 Protein Homology CDS 74161 74958 . + 0 ID=cds-WP_107369936.1;Parent=gene-RM610_RS07115;Dbxref=GenBank:WP_107369936.1;Name=WP_107369936.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501012.1;locus_tag=RM610_RS07115;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_107369936.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 75031 75789 . - . ID=gene-RM610_RS07120;Name=RM610_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07120;old_locus_tag=RM610_07145 NZ_JAVRJX010000002.1 Protein Homology CDS 75031 75789 . - 0 ID=cds-WP_233649540.1;Parent=gene-RM610_RS07120;Dbxref=GenBank:WP_233649540.1;Name=WP_233649540.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426315.1;locus_tag=RM610_RS07120;product=GNAT family N-acetyltransferase;protein_id=WP_233649540.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 75814 76368 . - . ID=gene-RM610_RS07125;Name=RM610_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07125;old_locus_tag=RM610_07150 NZ_JAVRJX010000002.1 Protein Homology CDS 75814 76368 . - 0 ID=cds-WP_107358495.1;Parent=gene-RM610_RS07125;Dbxref=GenBank:WP_107358495.1;Name=WP_107358495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=RM610_RS07125;product=biotin transporter BioY;protein_id=WP_107358495.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 76697 77611 . - . ID=gene-RM610_RS07130;Name=RM610_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07130;old_locus_tag=RM610_07155 NZ_JAVRJX010000002.1 Protein Homology CDS 76697 77611 . - 0 ID=cds-WP_107381143.1;Parent=gene-RM610_RS07130;Dbxref=GenBank:WP_107381143.1;Name=WP_107381143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471258.1;locus_tag=RM610_RS07130;product=ABC transporter substrate-binding protein;protein_id=WP_107381143.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 77820 78194 . - . ID=gene-RM610_RS07135;Name=RM610_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07135;old_locus_tag=RM610_07160 NZ_JAVRJX010000002.1 Protein Homology CDS 77820 78194 . - 0 ID=cds-WP_107358493.1;Parent=gene-RM610_RS07135;Dbxref=GenBank:WP_107358493.1;Name=WP_107358493.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=RM610_RS07135;product=YbaN family protein;protein_id=WP_107358493.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 78283 79449 . - . ID=gene-RM610_RS07140;Name=RM610_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07140;old_locus_tag=RM610_07165 NZ_JAVRJX010000002.1 Protein Homology CDS 78283 79449 . - 0 ID=cds-WP_107369640.1;Parent=gene-RM610_RS07140;Dbxref=GenBank:WP_107369640.1;Name=WP_107369640.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169652.1;locus_tag=RM610_RS07140;product=acyl-CoA dehydrogenase family protein;protein_id=WP_107369640.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 79713 80060 . - . ID=gene-RM610_RS07145;Name=RM610_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07145;old_locus_tag=RM610_07170 NZ_JAVRJX010000002.1 Protein Homology CDS 79713 80060 . - 0 ID=cds-WP_107375503.1;Parent=gene-RM610_RS07145;Dbxref=GenBank:WP_107375503.1;Name=WP_107375503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=RM610_RS07145;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_107375503.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 80320 80673 . - . ID=gene-RM610_RS07150;Name=RM610_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07150;old_locus_tag=RM610_07175 NZ_JAVRJX010000002.1 Protein Homology CDS 80320 80673 . - 0 ID=cds-WP_107358489.1;Parent=gene-RM610_RS07150;Dbxref=GenBank:WP_107358489.1;Name=WP_107358489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486907.1;locus_tag=RM610_RS07150;product=DoxX family protein;protein_id=WP_107358489.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 80692 81741 . - . ID=gene-RM610_RS07155;Name=RM610_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07155;old_locus_tag=RM610_07180 NZ_JAVRJX010000002.1 Protein Homology CDS 80692 81741 . - 0 ID=cds-WP_037574872.1;Parent=gene-RM610_RS07155;Dbxref=GenBank:WP_037574872.1;Name=WP_037574872.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=RM610_RS07155;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037574872.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 81873 82214 . - . ID=gene-RM610_RS07160;Name=RM610_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07160;old_locus_tag=RM610_07185 NZ_JAVRJX010000002.1 Protein Homology CDS 81873 82214 . - 0 ID=cds-WP_107358488.1;Parent=gene-RM610_RS07160;Dbxref=GenBank:WP_107358488.1;Name=WP_107358488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487083.1;locus_tag=RM610_RS07160;product=PH domain-containing protein;protein_id=WP_107358488.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 82668 83450 . + . ID=gene-RM610_RS07165;Name=RM610_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07165;old_locus_tag=RM610_07190 NZ_JAVRJX010000002.1 Protein Homology CDS 82668 83450 . + 0 ID=cds-WP_311542035.1;Parent=gene-RM610_RS07165;Dbxref=GenBank:WP_311542035.1;Name=WP_311542035.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717383.1;locus_tag=RM610_RS07165;product=CHAP domain-containing protein;protein_id=WP_311542035.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 83593 84066 . - . ID=gene-RM610_RS07170;Name=RM610_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07170;old_locus_tag=RM610_07195 NZ_JAVRJX010000002.1 Protein Homology CDS 83593 84066 . - 0 ID=cds-WP_107369638.1;Parent=gene-RM610_RS07170;Dbxref=GenBank:WP_107369638.1;Name=WP_107369638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=RM610_RS07170;product=hypothetical protein;protein_id=WP_107369638.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 84191 85603 . - . ID=gene-RM610_RS07175;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM610_RS07175;old_locus_tag=RM610_07200 NZ_JAVRJX010000002.1 Protein Homology CDS 84191 85603 . - 0 ID=cds-WP_311542036.1;Parent=gene-RM610_RS07175;Dbxref=GenBank:WP_311542036.1;Name=WP_311542036.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613164.1;locus_tag=RM610_RS07175;product=Na+/H+ antiporter NhaC;protein_id=WP_311542036.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 85624 86700 . - . ID=gene-RM610_RS07180;Name=RM610_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07180;old_locus_tag=RM610_07205 NZ_JAVRJX010000002.1 Protein Homology CDS 85624 86700 . - 0 ID=cds-WP_311542037.1;Parent=gene-RM610_RS07180;Dbxref=GenBank:WP_311542037.1;Name=WP_311542037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=RM610_RS07180;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_311542037.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 86891 87265 . + . ID=gene-RM610_RS07185;Name=RM610_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07185;old_locus_tag=RM610_07210 NZ_JAVRJX010000002.1 Protein Homology CDS 86891 87265 . + 0 ID=cds-WP_107358483.1;Parent=gene-RM610_RS07185;Dbxref=GenBank:WP_107358483.1;Name=WP_107358483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464060.1;locus_tag=RM610_RS07185;product=DUF4870 domain-containing protein;protein_id=WP_107358483.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 87667 88236 . + . ID=gene-RM610_RS07190;Name=RM610_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07190;old_locus_tag=RM610_07215 NZ_JAVRJX010000002.1 Protein Homology CDS 87667 88236 . + 0 ID=cds-WP_037574890.1;Parent=gene-RM610_RS07190;Dbxref=GenBank:WP_037574890.1;Name=WP_037574890.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=RM610_RS07190;product=CHAP domain-containing protein;protein_id=WP_037574890.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 88442 89398 . + . ID=gene-RM610_RS07195;Name=RM610_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07195;old_locus_tag=RM610_07220 NZ_JAVRJX010000002.1 Protein Homology CDS 88442 89398 . + 0 ID=cds-WP_105986307.1;Parent=gene-RM610_RS07195;Dbxref=GenBank:WP_105986307.1;Name=WP_105986307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275076.1;locus_tag=RM610_RS07195;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_105986307.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 89473 90597 . - . ID=gene-RM610_RS07200;Name=RM610_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07200;old_locus_tag=RM610_07225 NZ_JAVRJX010000002.1 Protein Homology CDS 89473 90597 . - 0 ID=cds-WP_311542038.1;Parent=gene-RM610_RS07200;Dbxref=GenBank:WP_311542038.1;Name=WP_311542038.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684156.1;locus_tag=RM610_RS07200;product=FAD-dependent monooxygenase;protein_id=WP_311542038.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 90729 91511 . - . ID=gene-RM610_RS07205;Name=RM610_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07205;old_locus_tag=RM610_07230 NZ_JAVRJX010000002.1 Protein Homology CDS 90729 91511 . - 0 ID=cds-WP_311542039.1;Parent=gene-RM610_RS07205;Dbxref=GenBank:WP_311542039.1;Name=WP_311542039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426293.1;locus_tag=RM610_RS07205;product=N-acetylglucosaminidase;protein_id=WP_311542039.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 91538 91780 . - . ID=gene-RM610_RS07210;Name=RM610_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07210;old_locus_tag=RM610_07235 NZ_JAVRJX010000002.1 Protein Homology CDS 91538 91780 . - 0 ID=cds-WP_107369633.1;Parent=gene-RM610_RS07210;Dbxref=GenBank:WP_107369633.1;Name=WP_107369633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=RM610_RS07210;product=hypothetical protein;protein_id=WP_107369633.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 91895 92359 . - . ID=gene-RM610_RS07215;Name=RM610_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07215;old_locus_tag=RM610_07240 NZ_JAVRJX010000002.1 Protein Homology CDS 91895 92359 . - 0 ID=cds-WP_107358479.1;Parent=gene-RM610_RS07215;Dbxref=GenBank:WP_107358479.1;Name=WP_107358479.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506903.1;locus_tag=RM610_RS07215;product=helical membrane plugin domain-containing protein;protein_id=WP_107358479.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 92359 95295 . - . ID=gene-RM610_RS07220;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=RM610_RS07220;old_locus_tag=RM610_07245 NZ_JAVRJX010000002.1 Protein Homology CDS 92359 95295 . - 0 ID=cds-WP_107381568.1;Parent=gene-RM610_RS07220;Dbxref=GenBank:WP_107381568.1;Name=WP_107381568.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=RM610_RS07220;product=formate dehydrogenase subunit alpha;protein_id=WP_107381568.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq pseudogene 95468 96108 . - . ID=gene-RM610_RS07225;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=pseudogene;locus_tag=RM610_RS07225;old_locus_tag=RM610_07250;pseudo=true NZ_JAVRJX010000002.1 Protein Homology CDS 95468 96108 . - 0 ID=cds-RM610_RS07225;Parent=gene-RM610_RS07225;Note=frameshifted;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900517.1;locus_tag=RM610_RS07225;product=pyroglutamyl-peptidase I;pseudo=true;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 96646 97560 . - . ID=gene-RM610_RS07230;Name=RM610_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07230;old_locus_tag=RM610_07255 NZ_JAVRJX010000002.1 Protein Homology CDS 96646 97560 . - 0 ID=cds-WP_311542087.1;Parent=gene-RM610_RS07230;Dbxref=GenBank:WP_311542087.1;Name=WP_311542087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460126.1;locus_tag=RM610_RS07230;product=LCP family glycopolymer transferase;protein_id=WP_311542087.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 97709 98503 . - . ID=gene-RM610_RS07235;Name=RM610_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07235;old_locus_tag=RM610_07260 NZ_JAVRJX010000002.1 Protein Homology CDS 97709 98503 . - 0 ID=cds-WP_107358477.1;Parent=gene-RM610_RS07235;Dbxref=GenBank:WP_107358477.1;Name=WP_107358477.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382877.1;locus_tag=RM610_RS07235;product=inositol monophosphatase family protein;protein_id=WP_107358477.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 98968 99663 . + . ID=gene-RM610_RS07240;Name=RM610_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07240;old_locus_tag=RM610_07265 NZ_JAVRJX010000002.1 Protein Homology CDS 98968 99663 . + 0 ID=cds-WP_194746306.1;Parent=gene-RM610_RS07240;Dbxref=GenBank:WP_194746306.1;Name=WP_194746306.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=RM610_RS07240;product=helix-turn-helix transcriptional regulator;protein_id=WP_194746306.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 99973 100704 . - . ID=gene-RM610_RS07245;Name=RM610_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07245;old_locus_tag=RM610_07270 NZ_JAVRJX010000002.1 Protein Homology CDS 99973 100704 . - 0 ID=cds-WP_311542040.1;Parent=gene-RM610_RS07245;Dbxref=GenBank:WP_311542040.1;Name=WP_311542040.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426283.1;locus_tag=RM610_RS07245;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311542040.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 100796 101128 . + . ID=gene-RM610_RS07250;Name=RM610_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07250;old_locus_tag=RM610_07275 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 100796 101128 . + 0 ID=cds-WP_107358474.1;Parent=gene-RM610_RS07250;Dbxref=GenBank:WP_107358474.1;Name=WP_107358474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07250;product=hypothetical protein;protein_id=WP_107358474.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 101212 102279 . + . ID=gene-RM610_RS07255;Name=RM610_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07255;old_locus_tag=RM610_07280 NZ_JAVRJX010000002.1 Protein Homology CDS 101212 102279 . + 0 ID=cds-WP_107369629.1;Parent=gene-RM610_RS07255;Dbxref=GenBank:WP_107369629.1;Name=WP_107369629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039260.6;locus_tag=RM610_RS07255;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_107369629.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 102260 103147 . + . ID=gene-RM610_RS07260;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=RM610_RS07260;old_locus_tag=RM610_07285 NZ_JAVRJX010000002.1 Protein Homology CDS 102260 103147 . + 0 ID=cds-WP_311542041.1;Parent=gene-RM610_RS07260;Dbxref=GenBank:WP_311542041.1;Name=WP_311542041.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510093.1;locus_tag=RM610_RS07260;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_311542041.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 103164 104573 . + . ID=gene-RM610_RS07265;Name=RM610_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07265;old_locus_tag=RM610_07290 NZ_JAVRJX010000002.1 Protein Homology CDS 103164 104573 . + 0 ID=cds-WP_107369628.1;Parent=gene-RM610_RS07265;Dbxref=GenBank:WP_107369628.1;Name=WP_107369628.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506895.1;locus_tag=RM610_RS07265;product=PTS transporter subunit EIIC;protein_id=WP_107369628.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 104825 106216 . - . ID=gene-RM610_RS07270;Name=RM610_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07270;old_locus_tag=RM610_07295 NZ_JAVRJX010000002.1 Protein Homology CDS 104825 106216 . - 0 ID=cds-WP_105965513.1;Parent=gene-RM610_RS07270;Dbxref=GenBank:WP_105965513.1;Name=WP_105965513.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=RM610_RS07270;product=amino acid permease;protein_id=WP_105965513.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 106547 107374 . + . ID=gene-RM610_RS07275;Name=RM610_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07275;old_locus_tag=RM610_07300 NZ_JAVRJX010000002.1 Protein Homology CDS 106547 107374 . + 0 ID=cds-WP_311542042.1;Parent=gene-RM610_RS07275;Dbxref=GenBank:WP_311542042.1;Name=WP_311542042.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=RM610_RS07275;product=formate/nitrite transporter family protein;protein_id=WP_311542042.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 107431 107769 . + . ID=gene-RM610_RS07280;Name=RM610_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07280;old_locus_tag=RM610_07305 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 107431 107769 . + 0 ID=cds-WP_107358469.1;Parent=gene-RM610_RS07280;Dbxref=GenBank:WP_107358469.1;Name=WP_107358469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07280;product=hypothetical protein;protein_id=WP_107358469.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 107772 107954 . + . ID=gene-RM610_RS07285;Name=RM610_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07285;old_locus_tag=RM610_07310 NZ_JAVRJX010000002.1 Protein Homology CDS 107772 107954 . + 0 ID=cds-WP_107358468.1;Parent=gene-RM610_RS07285;Dbxref=GenBank:WP_107358468.1;Name=WP_107358468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=RM610_RS07285;product=hypothetical protein;protein_id=WP_107358468.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 108058 108249 . - . ID=gene-RM610_RS07290;Name=RM610_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07290;old_locus_tag=RM610_07315 NZ_JAVRJX010000002.1 Protein Homology CDS 108058 108249 . - 0 ID=cds-WP_107358467.1;Parent=gene-RM610_RS07290;Dbxref=GenBank:WP_107358467.1;Name=WP_107358467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=RM610_RS07290;product=hypothetical protein;protein_id=WP_107358467.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 108246 108890 . - . ID=gene-RM610_RS07295;Name=RM610_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07295;old_locus_tag=RM610_07320 NZ_JAVRJX010000002.1 Protein Homology CDS 108246 108890 . - 0 ID=cds-WP_107369626.1;Parent=gene-RM610_RS07295;Dbxref=GenBank:WP_107369626.1;Name=WP_107369626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=RM610_RS07295;product=HAD family hydrolase;protein_id=WP_107369626.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 108953 109783 . - . ID=gene-RM610_RS07300;Name=RM610_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07300;old_locus_tag=RM610_07325 NZ_JAVRJX010000002.1 Protein Homology CDS 108953 109783 . - 0 ID=cds-WP_107369625.1;Parent=gene-RM610_RS07300;Dbxref=GenBank:WP_107369625.1;Name=WP_107369625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=RM610_RS07300;product=VOC family protein;protein_id=WP_107369625.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 109855 110124 . - . ID=gene-RM610_RS07305;Name=RM610_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07305;old_locus_tag=RM610_07330 NZ_JAVRJX010000002.1 Protein Homology CDS 109855 110124 . - 0 ID=cds-WP_107369624.1;Parent=gene-RM610_RS07305;Dbxref=GenBank:WP_107369624.1;Name=WP_107369624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=RM610_RS07305;product=hypothetical protein;protein_id=WP_107369624.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 110435 111382 . - . ID=gene-RM610_RS07310;Name=RM610_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07310;old_locus_tag=RM610_07335 NZ_JAVRJX010000002.1 Protein Homology CDS 110435 111382 . - 0 ID=cds-WP_311542043.1;Parent=gene-RM610_RS07310;Dbxref=GenBank:WP_311542043.1;Name=WP_311542043.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912301.1;locus_tag=RM610_RS07310;product=bile acid:sodium symporter family protein;protein_id=WP_311542043.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 111563 112093 . + . ID=gene-RM610_RS07315;Name=RM610_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07315;old_locus_tag=RM610_07340 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 111563 112093 . + 0 ID=cds-WP_311542044.1;Parent=gene-RM610_RS07315;Dbxref=GenBank:WP_311542044.1;Name=WP_311542044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07315;product=hypothetical protein;protein_id=WP_311542044.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 112258 112755 . - . ID=gene-RM610_RS07320;Name=RM610_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07320;old_locus_tag=RM610_07345 NZ_JAVRJX010000002.1 Protein Homology CDS 112258 112755 . - 0 ID=cds-WP_311542045.1;Parent=gene-RM610_RS07320;Dbxref=GenBank:WP_311542045.1;Name=WP_311542045.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931126.1;locus_tag=RM610_RS07320;product=SRPBCC family protein;protein_id=WP_311542045.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 112869 114179 . - . ID=gene-RM610_RS07325;Name=RM610_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07325;old_locus_tag=RM610_07350 NZ_JAVRJX010000002.1 Protein Homology CDS 112869 114179 . - 0 ID=cds-WP_311542046.1;Parent=gene-RM610_RS07325;Dbxref=GenBank:WP_311542046.1;Name=WP_311542046.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460143.1;locus_tag=RM610_RS07325;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_311542046.1;transl_table=11 NZ_JAVRJX010000002.1 cmsearch riboswitch 114270 114367 . - . ID=id-NZ_JAVRJX010000002.1:114270..114367;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000002.1 RefSeq gene 114413 115543 . - . ID=gene-RM610_RS07330;Name=RM610_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07330;old_locus_tag=RM610_07355 NZ_JAVRJX010000002.1 Protein Homology CDS 114413 115543 . - 0 ID=cds-WP_107358461.1;Parent=gene-RM610_RS07330;Dbxref=GenBank:WP_107358461.1;Name=WP_107358461.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482529.1;locus_tag=RM610_RS07330;product=amidohydrolase;protein_id=WP_107358461.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 115553 116719 . - . ID=gene-RM610_RS07335;Name=RM610_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07335;old_locus_tag=RM610_07360 NZ_JAVRJX010000002.1 Protein Homology CDS 115553 116719 . - 0 ID=cds-WP_311542047.1;Parent=gene-RM610_RS07335;Dbxref=GenBank:WP_311542047.1;Name=WP_311542047.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219780.1;locus_tag=RM610_RS07335;product=SulP family inorganic anion transporter;protein_id=WP_311542047.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 116902 118137 . - . ID=gene-RM610_RS07340;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=RM610_RS07340;old_locus_tag=RM610_07365 NZ_JAVRJX010000002.1 Protein Homology CDS 116902 118137 . - 0 ID=cds-WP_107358460.1;Parent=gene-RM610_RS07340;Dbxref=GenBank:WP_107358460.1;Name=WP_107358460.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382896.1;locus_tag=RM610_RS07340;product=imidazolonepropionase;protein_id=WP_107358460.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 118137 119804 . - . ID=gene-RM610_RS07345;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=RM610_RS07345;old_locus_tag=RM610_07370 NZ_JAVRJX010000002.1 Protein Homology CDS 118137 119804 . - 0 ID=cds-WP_233649456.1;Parent=gene-RM610_RS07345;Dbxref=GenBank:WP_233649456.1;Name=WP_233649456.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911396.1;locus_tag=RM610_RS07345;product=urocanate hydratase;protein_id=WP_233649456.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 119823 121097 . - . ID=gene-RM610_RS07350;Name=RM610_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07350;old_locus_tag=RM610_07375 NZ_JAVRJX010000002.1 Protein Homology CDS 119823 121097 . - 0 ID=cds-WP_375712511.1;Parent=gene-RM610_RS07350;Dbxref=GenBank:WP_375712511.1;Name=WP_375712511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=RM610_RS07350;product=YjiH family protein;protein_id=WP_375712511.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 121406 122284 . + . ID=gene-RM610_RS07355;Name=RM610_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07355;old_locus_tag=RM610_07380 NZ_JAVRJX010000002.1 Protein Homology CDS 121406 122284 . + 0 ID=cds-WP_107358457.1;Parent=gene-RM610_RS07355;Dbxref=GenBank:WP_107358457.1;Name=WP_107358457.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382899.1;locus_tag=RM610_RS07355;product=LysR family transcriptional regulator;protein_id=WP_107358457.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 122347 123276 . - . ID=gene-RM610_RS07360;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=RM610_RS07360;old_locus_tag=RM610_07385 NZ_JAVRJX010000002.1 Protein Homology CDS 122347 123276 . - 0 ID=cds-WP_311542048.1;Parent=gene-RM610_RS07360;Dbxref=GenBank:WP_311542048.1;Name=WP_311542048.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=RM610_RS07360;product=formimidoylglutamase;protein_id=WP_311542048.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 123535 124587 . + . ID=gene-RM610_RS07365;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=RM610_RS07365;old_locus_tag=RM610_07390 NZ_JAVRJX010000002.1 Protein Homology CDS 123535 124587 . + 0 ID=cds-WP_311542049.1;Parent=gene-RM610_RS07365;Dbxref=GenBank:WP_311542049.1;Name=WP_311542049.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901073.1;locus_tag=RM610_RS07365;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_311542049.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 124628 125317 . - . ID=gene-RM610_RS07370;Name=RM610_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07370;old_locus_tag=RM610_07395 NZ_JAVRJX010000002.1 Protein Homology CDS 124628 125317 . - 0 ID=cds-WP_311542050.1;Parent=gene-RM610_RS07370;Dbxref=GenBank:WP_311542050.1;Name=WP_311542050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426261.1;locus_tag=RM610_RS07370;product=ribose 5-phosphate isomerase A;protein_id=WP_311542050.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 125450 126109 . + . ID=gene-RM610_RS07375;Name=RM610_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07375;old_locus_tag=RM610_07400 NZ_JAVRJX010000002.1 Protein Homology CDS 125450 126109 . + 0 ID=cds-WP_107358452.1;Parent=gene-RM610_RS07375;Dbxref=GenBank:WP_107358452.1;Name=WP_107358452.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169604.1;locus_tag=RM610_RS07375;product=MOSC domain-containing protein;protein_id=WP_107358452.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 126127 126324 . + . ID=gene-RM610_RS07380;Name=RM610_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07380;old_locus_tag=RM610_07405 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 126127 126324 . + 0 ID=cds-WP_107358450.1;Parent=gene-RM610_RS07380;Dbxref=GenBank:WP_107358450.1;Name=WP_107358450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07380;product=hypothetical protein;protein_id=WP_107358450.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 126668 126877 . - . ID=gene-RM610_RS07385;Name=RM610_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07385;old_locus_tag=RM610_07410 NZ_JAVRJX010000002.1 Protein Homology CDS 126668 126877 . - 0 ID=cds-WP_037574974.1;Parent=gene-RM610_RS07385;Dbxref=GenBank:WP_037574974.1;Name=WP_037574974.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479678.1;locus_tag=RM610_RS07385;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574974.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 127033 127365 . - . ID=gene-RM610_RS07390;Name=RM610_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07390;old_locus_tag=RM610_07415 NZ_JAVRJX010000002.1 Protein Homology CDS 127033 127365 . - 0 ID=cds-WP_103158962.1;Parent=gene-RM610_RS07390;Dbxref=GenBank:WP_103158962.1;Name=WP_103158962.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=RM610_RS07390;product=YnfA family protein;protein_id=WP_103158962.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 127484 128719 . - . ID=gene-RM610_RS07395;Name=RM610_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07395;old_locus_tag=RM610_07420 NZ_JAVRJX010000002.1 Protein Homology CDS 127484 128719 . - 0 ID=cds-WP_107358448.1;Parent=gene-RM610_RS07395;Dbxref=GenBank:WP_107358448.1;Name=WP_107358448.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=RM610_RS07395;product=ABC transporter permease;protein_id=WP_107358448.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 128712 129611 . - . ID=gene-RM610_RS07400;Name=RM610_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07400;old_locus_tag=RM610_07425 NZ_JAVRJX010000002.1 Protein Homology CDS 128712 129611 . - 0 ID=cds-WP_107358447.1;Parent=gene-RM610_RS07400;Dbxref=GenBank:WP_107358447.1;Name=WP_107358447.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636490.1;locus_tag=RM610_RS07400;product=ABC transporter ATP-binding protein;protein_id=WP_107358447.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 129790 130452 . - . ID=gene-RM610_RS07405;Name=RM610_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07405;old_locus_tag=RM610_07430 NZ_JAVRJX010000002.1 Protein Homology CDS 129790 130452 . - 0 ID=cds-WP_311542051.1;Parent=gene-RM610_RS07405;Dbxref=GenBank:WP_311542051.1;Name=WP_311542051.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167135.1;locus_tag=RM610_RS07405;product=DUF805 domain-containing protein;protein_id=WP_311542051.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 130646 131254 . + . ID=gene-RM610_RS07410;Name=RM610_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07410;old_locus_tag=RM610_07435 NZ_JAVRJX010000002.1 Protein Homology CDS 130646 131254 . + 0 ID=cds-WP_107358444.1;Parent=gene-RM610_RS07410;Dbxref=GenBank:WP_107358444.1;Name=WP_107358444.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610585.1;locus_tag=RM610_RS07410;product=DNA-3-methyladenine glycosylase;protein_id=WP_107358444.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 131328 132650 . - . ID=gene-RM610_RS07415;Name=RM610_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07415;old_locus_tag=RM610_07440 NZ_JAVRJX010000002.1 Protein Homology CDS 131328 132650 . - 0 ID=cds-WP_311542052.1;Parent=gene-RM610_RS07415;Dbxref=GenBank:WP_311542052.1;Name=WP_311542052.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426251.1;locus_tag=RM610_RS07415;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_311542052.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 132814 133659 . - . ID=gene-RM610_RS07420;Name=RM610_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07420;old_locus_tag=RM610_07445 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 132814 133659 . - 0 ID=cds-WP_311542053.1;Parent=gene-RM610_RS07420;Dbxref=GenBank:WP_311542053.1;Name=WP_311542053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07420;product=hypothetical protein;protein_id=WP_311542053.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 133895 134617 . + . ID=gene-RM610_RS07425;Name=RM610_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07425;old_locus_tag=RM610_07450 NZ_JAVRJX010000002.1 Protein Homology CDS 133895 134617 . + 0 ID=cds-WP_311542054.1;Parent=gene-RM610_RS07425;Dbxref=GenBank:WP_311542054.1;Name=WP_311542054.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014376.7;locus_tag=RM610_RS07425;product=AraC family ligand binding domain-containing protein;protein_id=WP_311542054.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 134771 135982 . + . ID=gene-RM610_RS07430;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=RM610_RS07430;old_locus_tag=RM610_07455 NZ_JAVRJX010000002.1 Protein Homology CDS 134771 135982 . + 0 ID=cds-WP_107358439.1;Parent=gene-RM610_RS07430;Dbxref=GenBank:WP_107358439.1;Name=WP_107358439.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=RM610_RS07430;product=sodium/glutamate symporter;protein_id=WP_107358439.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 136107 137309 . - . ID=gene-RM610_RS07435;Name=RM610_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07435;old_locus_tag=RM610_07460 NZ_JAVRJX010000002.1 Protein Homology CDS 136107 137309 . - 0 ID=cds-WP_311542055.1;Parent=gene-RM610_RS07435;Dbxref=GenBank:WP_311542055.1;Name=WP_311542055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477446.1;locus_tag=RM610_RS07435;product=GTP-binding protein;protein_id=WP_311542055.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 137448 138482 . - . ID=gene-RM610_RS07440;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=RM610_RS07440;old_locus_tag=RM610_07465 NZ_JAVRJX010000002.1 Protein Homology CDS 137448 138482 . - 0 ID=cds-WP_194746288.1;Parent=gene-RM610_RS07440;Dbxref=GenBank:WP_194746288.1;Name=WP_194746288.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=RM610_RS07440;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_194746288.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 138609 139085 . + . ID=gene-RM610_RS07445;Name=RM610_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07445;old_locus_tag=RM610_07470 NZ_JAVRJX010000002.1 Protein Homology CDS 138609 139085 . + 0 ID=cds-WP_105963189.1;Parent=gene-RM610_RS07445;Dbxref=GenBank:WP_105963189.1;Name=WP_105963189.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426239.1;locus_tag=RM610_RS07445;product=thioesterase family protein;protein_id=WP_105963189.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 139123 140109 . - . ID=gene-RM610_RS07450;Name=RM610_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07450;old_locus_tag=RM610_07475 NZ_JAVRJX010000002.1 Protein Homology CDS 139123 140109 . - 0 ID=cds-WP_229717311.1;Parent=gene-RM610_RS07450;Dbxref=GenBank:WP_229717311.1;Name=WP_229717311.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=RM610_RS07450;product=PTS sugar transporter subunit IIC;protein_id=WP_229717311.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq pseudogene 140063 140161 . + . ID=gene-RM610_RS07455;Name=RM610_RS07455;end_range=140161,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS07455;old_locus_tag=RM610_07480;partial=true;pseudo=true NZ_JAVRJX010000002.1 Protein Homology CDS 140063 140161 . + 0 ID=cds-RM610_RS07455;Parent=gene-RM610_RS07455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=140161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=RM610_RS07455;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 140481 141386 . - . ID=gene-RM610_RS07460;Name=RM610_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07460;old_locus_tag=RM610_07485 NZ_JAVRJX010000002.1 Protein Homology CDS 140481 141386 . - 0 ID=cds-WP_107358438.1;Parent=gene-RM610_RS07460;Dbxref=GenBank:WP_107358438.1;Name=WP_107358438.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426237.1;locus_tag=RM610_RS07460;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_107358438.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 141440 141769 . - . ID=gene-RM610_RS07465;Name=RM610_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07465;old_locus_tag=RM610_07490 NZ_JAVRJX010000002.1 Protein Homology CDS 141440 141769 . - 0 ID=cds-WP_107369608.1;Parent=gene-RM610_RS07465;Dbxref=GenBank:WP_107369608.1;Name=WP_107369608.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470023.1;locus_tag=RM610_RS07465;product=thioredoxin family protein;protein_id=WP_107369608.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 141884 142507 . + . ID=gene-RM610_RS07470;Name=RM610_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07470;old_locus_tag=RM610_07495 NZ_JAVRJX010000002.1 Protein Homology CDS 141884 142507 . + 0 ID=cds-WP_107358435.1;Parent=gene-RM610_RS07470;Dbxref=GenBank:WP_107358435.1;Name=WP_107358435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426235.1;locus_tag=RM610_RS07470;product=hypothetical protein;protein_id=WP_107358435.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 142804 143352 . - . ID=gene-RM610_RS07475;Name=RM610_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07475;old_locus_tag=RM610_07500 NZ_JAVRJX010000002.1 Protein Homology CDS 142804 143352 . - 0 ID=cds-WP_311542088.1;Parent=gene-RM610_RS07475;Dbxref=GenBank:WP_311542088.1;Name=WP_311542088.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM610_RS07475;product=TetR/AcrR family transcriptional regulator;protein_id=WP_311542088.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 143687 145081 . - . ID=gene-RM610_RS07480;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=RM610_RS07480;old_locus_tag=RM610_07505 NZ_JAVRJX010000002.1 Protein Homology CDS 143687 145081 . - 0 ID=cds-WP_311542056.1;Parent=gene-RM610_RS07480;Dbxref=GenBank:WP_311542056.1;Name=WP_311542056.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=RM610_RS07480;product=membrane-associated protein TcaA;protein_id=WP_311542056.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 145197 145655 . - . ID=gene-RM610_RS07485;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=RM610_RS07485;old_locus_tag=RM610_07510 NZ_JAVRJX010000002.1 Protein Homology CDS 145197 145655 . - 0 ID=cds-WP_311542057.1;Parent=gene-RM610_RS07485;Dbxref=GenBank:WP_311542057.1;Name=WP_311542057.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169579.1;locus_tag=RM610_RS07485;product=MarR family transcriptional regulator TcaR;protein_id=WP_311542057.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 146132 146833 . + . ID=gene-RM610_RS07490;Name=RM610_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07490;old_locus_tag=RM610_07515 NZ_JAVRJX010000002.1 Protein Homology CDS 146132 146833 . + 0 ID=cds-WP_311542058.1;Parent=gene-RM610_RS07490;Dbxref=GenBank:WP_311542058.1;Name=WP_311542058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014724.7;locus_tag=RM610_RS07490;product=YdcF family protein;protein_id=WP_311542058.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 146909 148441 . + . ID=gene-RM610_RS07495;Name=RM610_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07495;old_locus_tag=RM610_07520 NZ_JAVRJX010000002.1 Protein Homology CDS 146909 148441 . + 0 ID=cds-WP_107369604.1;Parent=gene-RM610_RS07495;Dbxref=GenBank:WP_107369604.1;Name=WP_107369604.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165510.1;locus_tag=RM610_RS07495;product=AbgT family transporter;protein_id=WP_107369604.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 148496 149170 . - . ID=gene-RM610_RS07500;Name=RM610_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07500;old_locus_tag=RM610_07525 NZ_JAVRJX010000002.1 Protein Homology CDS 148496 149170 . - 0 ID=cds-WP_107358428.1;Parent=gene-RM610_RS07500;Dbxref=GenBank:WP_107358428.1;Name=WP_107358428.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426229.1;locus_tag=RM610_RS07500;product=ABC transporter ATP-binding protein;protein_id=WP_107358428.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 149170 150231 . - . ID=gene-RM610_RS07505;Name=RM610_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07505;old_locus_tag=RM610_07530 NZ_JAVRJX010000002.1 Protein Homology CDS 149170 150231 . - 0 ID=cds-WP_311542059.1;Parent=gene-RM610_RS07505;Dbxref=GenBank:WP_311542059.1;Name=WP_311542059.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176794.1;locus_tag=RM610_RS07505;product=ABC transporter permease;protein_id=WP_311542059.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 150422 151099 . + . ID=gene-RM610_RS07510;Name=RM610_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07510;old_locus_tag=RM610_07535 NZ_JAVRJX010000002.1 Protein Homology CDS 150422 151099 . + 0 ID=cds-WP_107369602.1;Parent=gene-RM610_RS07510;Dbxref=GenBank:WP_107369602.1;Name=WP_107369602.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=RM610_RS07510;product=response regulator transcription factor;protein_id=WP_107369602.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 151092 152465 . + . ID=gene-RM610_RS07515;Name=RM610_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07515;old_locus_tag=RM610_07540 NZ_JAVRJX010000002.1 Protein Homology CDS 151092 152465 . + 0 ID=cds-WP_311542060.1;Parent=gene-RM610_RS07515;Dbxref=GenBank:WP_311542060.1;Name=WP_311542060.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472129.1;locus_tag=RM610_RS07515;product=sensor histidine kinase;protein_id=WP_311542060.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 152999 154501 . - . ID=gene-RM610_RS07520;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=RM610_RS07520;old_locus_tag=RM610_07545 NZ_JAVRJX010000002.1 Protein Homology CDS 152999 154501 . - 0 ID=cds-WP_107369461.1;Parent=gene-RM610_RS07520;Dbxref=GenBank:WP_107369461.1;Name=WP_107369461.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=RM610_RS07520;product=malate dehydrogenase (quinone);protein_id=WP_107369461.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 154848 156011 . + . ID=gene-RM610_RS07525;Name=RM610_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07525;old_locus_tag=RM610_07550 NZ_JAVRJX010000002.1 Protein Homology CDS 154848 156011 . + 0 ID=cds-WP_311542061.1;Parent=gene-RM610_RS07525;Dbxref=GenBank:WP_311542061.1;Name=WP_311542061.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=RM610_RS07525;product=glycosyltransferase family 4 protein;protein_id=WP_311542061.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 156155 157756 . - . ID=gene-RM610_RS07530;Name=RM610_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07530;old_locus_tag=RM610_07555 NZ_JAVRJX010000002.1 Protein Homology CDS 156155 157756 . - 0 ID=cds-WP_107381627.1;Parent=gene-RM610_RS07530;Dbxref=GenBank:WP_107381627.1;Name=WP_107381627.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426220.1;locus_tag=RM610_RS07530;product=L-lactate permease;protein_id=WP_107381627.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 158107 158775 . - . ID=gene-RM610_RS07535;Name=RM610_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07535;old_locus_tag=RM610_07560 NZ_JAVRJX010000002.1 Protein Homology CDS 158107 158775 . - 0 ID=cds-WP_194746080.1;Parent=gene-RM610_RS07535;Dbxref=GenBank:WP_194746080.1;Name=WP_194746080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=RM610_RS07535;product=hypothetical protein;protein_id=WP_194746080.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 158855 159370 . - . ID=gene-RM610_RS07540;Name=RM610_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07540;old_locus_tag=RM610_07565 NZ_JAVRJX010000002.1 Protein Homology CDS 158855 159370 . - 0 ID=cds-WP_107369465.1;Parent=gene-RM610_RS07540;Dbxref=GenBank:WP_107369465.1;Name=WP_107369465.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168205.1;locus_tag=RM610_RS07540;product=GNAT family N-acetyltransferase;protein_id=WP_107369465.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 159492 160481 . + . ID=gene-RM610_RS07545;Name=RM610_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07545;old_locus_tag=RM610_07570 NZ_JAVRJX010000002.1 Protein Homology CDS 159492 160481 . + 0 ID=cds-WP_311542062.1;Parent=gene-RM610_RS07545;Dbxref=GenBank:WP_311542062.1;Name=WP_311542062.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=RM610_RS07545;product=acrylyl-CoA reductase family protein;protein_id=WP_311542062.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 160730 162064 . + . ID=gene-RM610_RS07550;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=RM610_RS07550;old_locus_tag=RM610_07575 NZ_JAVRJX010000002.1 Protein Homology CDS 160730 162064 . + 0 ID=cds-WP_107358409.1;Parent=gene-RM610_RS07550;Dbxref=GenBank:WP_107358409.1;Name=WP_107358409.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=RM610_RS07550;product=glucose transporter GlcP;protein_id=WP_107358409.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 162188 163216 . + . ID=gene-RM610_RS07555;Name=RM610_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07555;old_locus_tag=RM610_07580 NZ_JAVRJX010000002.1 Protein Homology CDS 162188 163216 . + 0 ID=cds-WP_311542063.1;Parent=gene-RM610_RS07555;Dbxref=GenBank:WP_311542063.1;Name=WP_311542063.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655970.1;locus_tag=RM610_RS07555;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311542063.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 163232 163648 . + . ID=gene-RM610_RS07560;Name=RM610_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07560;old_locus_tag=RM610_07585 NZ_JAVRJX010000002.1 Protein Homology CDS 163232 163648 . + 0 ID=cds-WP_311542064.1;Parent=gene-RM610_RS07560;Dbxref=GenBank:WP_311542064.1;Name=WP_311542064.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729591.1;locus_tag=RM610_RS07560;product=GNAT family N-acetyltransferase;protein_id=WP_311542064.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 163728 164177 . - . ID=gene-RM610_RS07565;Name=RM610_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07565;old_locus_tag=RM610_07590 NZ_JAVRJX010000002.1 Protein Homology CDS 163728 164177 . - 0 ID=cds-WP_107381655.1;Parent=gene-RM610_RS07565;Dbxref=GenBank:WP_107381655.1;Name=WP_107381655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426215.1;locus_tag=RM610_RS07565;product=DUF2871 domain-containing protein;protein_id=WP_107381655.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 164245 164856 . - . ID=gene-RM610_RS07570;Name=RM610_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07570;old_locus_tag=RM610_07595 NZ_JAVRJX010000002.1 Protein Homology CDS 164245 164856 . - 0 ID=cds-WP_107381657.1;Parent=gene-RM610_RS07570;Dbxref=GenBank:WP_107381657.1;Name=WP_107381657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168199.1;locus_tag=RM610_RS07570;product=YcnI family protein;protein_id=WP_107381657.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 164889 166127 . - . ID=gene-RM610_RS07575;Name=RM610_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07575;old_locus_tag=RM610_07600 NZ_JAVRJX010000002.1 Protein Homology CDS 164889 166127 . - 0 ID=cds-WP_311542065.1;Parent=gene-RM610_RS07575;Dbxref=GenBank:WP_311542065.1;Name=WP_311542065.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426213.1;locus_tag=RM610_RS07575;product=copper resistance CopC/CopD family protein;protein_id=WP_311542065.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 166264 167925 . - . ID=gene-RM610_RS07580;Name=RM610_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07580;old_locus_tag=RM610_07605 NZ_JAVRJX010000002.1 Protein Homology CDS 166264 167925 . - 0 ID=cds-WP_107375691.1;Parent=gene-RM610_RS07580;Dbxref=GenBank:WP_107375691.1;Name=WP_107375691.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498664.1;locus_tag=RM610_RS07580;product=Na/Pi cotransporter family protein;protein_id=WP_107375691.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 168205 168672 . + . ID=gene-RM610_RS07585;Name=RM610_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07585;old_locus_tag=RM610_07610 NZ_JAVRJX010000002.1 Protein Homology CDS 168205 168672 . + 0 ID=cds-WP_103159530.1;Parent=gene-RM610_RS07585;Dbxref=GenBank:WP_103159530.1;Name=WP_103159530.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=RM610_RS07585;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_103159530.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 168665 169603 . + . ID=gene-RM610_RS07590;Name=RM610_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07590;old_locus_tag=RM610_07615 NZ_JAVRJX010000002.1 Protein Homology CDS 168665 169603 . + 0 ID=cds-WP_103159531.1;Parent=gene-RM610_RS07590;Dbxref=GenBank:WP_103159531.1;Name=WP_103159531.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=RM610_RS07590;product=magnesium transporter CorA family protein;protein_id=WP_103159531.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 170182 172302 . + . ID=gene-RM610_RS07595;Name=RM610_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07595;old_locus_tag=RM610_07620 NZ_JAVRJX010000002.1 Protein Homology CDS 170182 172302 . + 0 ID=cds-WP_107519283.1;Parent=gene-RM610_RS07595;Dbxref=GenBank:WP_107519283.1;Name=WP_107519283.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.7;locus_tag=RM610_RS07595;product=helix-turn-helix transcriptional regulator;protein_id=WP_107519283.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 172393 173277 . + . ID=gene-RM610_RS07600;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=RM610_RS07600;old_locus_tag=RM610_07625 NZ_JAVRJX010000002.1 Protein Homology CDS 172393 173277 . + 0 ID=cds-WP_107369469.1;Parent=gene-RM610_RS07600;Dbxref=GenBank:WP_107369469.1;Name=WP_107369469.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274904.1;locus_tag=RM610_RS07600;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_107369469.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 173331 174542 . - . ID=gene-RM610_RS07605;Name=RM610_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07605;old_locus_tag=RM610_07630 NZ_JAVRJX010000002.1 Protein Homology CDS 173331 174542 . - 0 ID=cds-WP_311542066.1;Parent=gene-RM610_RS07605;Dbxref=GenBank:WP_311542066.1;Name=WP_311542066.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999010.1;locus_tag=RM610_RS07605;product=CynX/NimT family MFS transporter;protein_id=WP_311542066.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 174706 174912 . - . ID=gene-RM610_RS07610;Name=RM610_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07610;old_locus_tag=RM610_07635 NZ_JAVRJX010000002.1 Protein Homology CDS 174706 174912 . - 0 ID=cds-WP_311542067.1;Parent=gene-RM610_RS07610;Dbxref=GenBank:WP_311542067.1;Name=WP_311542067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488219.1;locus_tag=RM610_RS07610;product=YozE family protein;protein_id=WP_311542067.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 175108 175455 . + . ID=gene-RM610_RS07615;Name=RM610_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07615;old_locus_tag=RM610_07640 NZ_JAVRJX010000002.1 Protein Homology CDS 175108 175455 . + 0 ID=cds-WP_107375469.1;Parent=gene-RM610_RS07615;Dbxref=GenBank:WP_107375469.1;Name=WP_107375469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426206.1;locus_tag=RM610_RS07615;product=DUF4889 domain-containing protein;protein_id=WP_107375469.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 175694 176596 . - . ID=gene-RM610_RS07620;Name=RM610_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07620;old_locus_tag=RM610_07645 NZ_JAVRJX010000002.1 Protein Homology CDS 175694 176596 . - 0 ID=cds-WP_107375468.1;Parent=gene-RM610_RS07620;Dbxref=GenBank:WP_107375468.1;Name=WP_107375468.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479716.1;locus_tag=RM610_RS07620;product=EamA family transporter;protein_id=WP_107375468.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 176752 177825 . - . ID=gene-RM610_RS07625;Name=RM610_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07625;old_locus_tag=RM610_07650 NZ_JAVRJX010000002.1 Protein Homology CDS 176752 177825 . - 0 ID=cds-WP_107358396.1;Parent=gene-RM610_RS07625;Dbxref=GenBank:WP_107358396.1;Name=WP_107358396.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=RM610_RS07625;product=M42 family metallopeptidase;protein_id=WP_107358396.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 177987 178343 . - . ID=gene-RM610_RS07630;Name=RM610_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07630;old_locus_tag=RM610_07655 NZ_JAVRJX010000002.1 Protein Homology CDS 177987 178343 . - 0 ID=cds-WP_037575076.1;Parent=gene-RM610_RS07630;Dbxref=GenBank:WP_037575076.1;Name=WP_037575076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=RM610_RS07630;product=DUF3139 domain-containing protein;protein_id=WP_037575076.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 178533 180134 . + . ID=gene-RM610_RS07635;Name=RM610_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07635;old_locus_tag=RM610_07660 NZ_JAVRJX010000002.1 Protein Homology CDS 178533 180134 . + 0 ID=cds-WP_107358395.1;Parent=gene-RM610_RS07635;Dbxref=GenBank:WP_107358395.1;Name=WP_107358395.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999617.1;locus_tag=RM610_RS07635;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_107358395.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 180188 181351 . - . ID=gene-RM610_RS07640;Name=RM610_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07640;old_locus_tag=RM610_07665 NZ_JAVRJX010000002.1 Protein Homology CDS 180188 181351 . - 0 ID=cds-WP_107358393.1;Parent=gene-RM610_RS07640;Dbxref=GenBank:WP_107358393.1;Name=WP_107358393.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501133.1;locus_tag=RM610_RS07640;product=nitrate/nitrite transporter;protein_id=WP_107358393.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 181625 182275 . - . ID=gene-RM610_RS07645;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=RM610_RS07645;old_locus_tag=RM610_07670 NZ_JAVRJX010000002.1 Protein Homology CDS 181625 182275 . - 0 ID=cds-WP_103158659.1;Parent=gene-RM610_RS07645;Dbxref=GenBank:WP_103158659.1;Name=WP_103158659.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=RM610_RS07645;product=nitrate respiration regulation response regulator NreC;protein_id=WP_103158659.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 182293 183336 . - . ID=gene-RM610_RS07650;Name=RM610_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07650;old_locus_tag=RM610_07675 NZ_JAVRJX010000002.1 Protein Homology CDS 182293 183336 . - 0 ID=cds-WP_107358392.1;Parent=gene-RM610_RS07650;Dbxref=GenBank:WP_107358392.1;Name=WP_107358392.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501138.1;locus_tag=RM610_RS07650;product=sensor histidine kinase;protein_id=WP_107358392.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 183336 183797 . - . ID=gene-RM610_RS07655;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=RM610_RS07655;old_locus_tag=RM610_07680 NZ_JAVRJX010000002.1 Protein Homology CDS 183336 183797 . - 0 ID=cds-WP_107358390.1;Parent=gene-RM610_RS07655;Dbxref=GenBank:WP_107358390.1;Name=WP_107358390.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426196.1;locus_tag=RM610_RS07655;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_107358390.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 183815 184492 . - . ID=gene-RM610_RS07660;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=RM610_RS07660;old_locus_tag=RM610_07685 NZ_JAVRJX010000002.1 Protein Homology CDS 183815 184492 . - 0 ID=cds-WP_037575096.1;Parent=gene-RM610_RS07660;Dbxref=GenBank:WP_037575096.1;Name=WP_037575096.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=RM610_RS07660;product=respiratory nitrate reductase subunit gamma;protein_id=WP_037575096.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 184485 185060 . - . ID=gene-RM610_RS07665;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=RM610_RS07665;old_locus_tag=RM610_07690 NZ_JAVRJX010000002.1 Protein Homology CDS 184485 185060 . - 0 ID=cds-WP_107358388.1;Parent=gene-RM610_RS07665;Dbxref=GenBank:WP_107358388.1;Name=WP_107358388.1;Ontology_term=GO:0051131;gbkey=CDS;gene=narJ;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=RM610_RS07665;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_107358388.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 185053 186609 . - . ID=gene-RM610_RS07670;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=RM610_RS07670;old_locus_tag=RM610_07695 NZ_JAVRJX010000002.1 Protein Homology CDS 185053 186609 . - 0 ID=cds-WP_107364289.1;Parent=gene-RM610_RS07670;Dbxref=GenBank:WP_107364289.1;Name=WP_107364289.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=RM610_RS07670;product=nitrate reductase subunit beta;protein_id=WP_107364289.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 186599 190270 . - . ID=gene-RM610_RS07675;Name=RM610_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07675;old_locus_tag=RM610_07700 NZ_JAVRJX010000002.1 Protein Homology CDS 186599 190270 . - 0 ID=cds-WP_311542068.1;Parent=gene-RM610_RS07675;Dbxref=GenBank:WP_311542068.1;Name=WP_311542068.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=RM610_RS07675;product=nitrate reductase subunit alpha;protein_id=WP_311542068.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 190674 193172 . - . ID=gene-RM610_RS07680;Name=RM610_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07680;old_locus_tag=RM610_07705 NZ_JAVRJX010000002.1 Protein Homology CDS 190674 193172 . - 0 ID=cds-WP_311542069.1;Parent=gene-RM610_RS07680;Dbxref=GenBank:WP_311542069.1;Name=WP_311542069.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167967.1;locus_tag=RM610_RS07680;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_311542069.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 193324 194250 . - . ID=gene-RM610_RS07685;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM610_RS07685;old_locus_tag=RM610_07710 NZ_JAVRJX010000002.1 Protein Homology CDS 193324 194250 . - 0 ID=cds-WP_107369477.1;Parent=gene-RM610_RS07685;Dbxref=GenBank:WP_107369477.1;Name=WP_107369477.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169215.1;locus_tag=RM610_RS07685;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_107369477.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 194241 194558 . - . ID=gene-RM610_RS07690;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=RM610_RS07690;old_locus_tag=RM610_07715 NZ_JAVRJX010000002.1 Protein Homology CDS 194241 194558 . - 0 ID=cds-WP_037575111.1;Parent=gene-RM610_RS07690;Dbxref=GenBank:WP_037575111.1;Name=WP_037575111.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=RM610_RS07690;product=nitrite reductase small subunit NirD;protein_id=WP_037575111.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 194561 196966 . - . ID=gene-RM610_RS07695;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=RM610_RS07695;old_locus_tag=RM610_07720 NZ_JAVRJX010000002.1 Protein Homology CDS 194561 196966 . - 0 ID=cds-WP_107369478.1;Parent=gene-RM610_RS07695;Dbxref=GenBank:WP_107369478.1;Name=WP_107369478.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=RM610_RS07695;product=nitrite reductase large subunit NirB;protein_id=WP_107369478.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 196959 197420 . - . ID=gene-RM610_RS07700;Name=RM610_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07700;old_locus_tag=RM610_07725 NZ_JAVRJX010000002.1 Protein Homology CDS 196959 197420 . - 0 ID=cds-WP_107358382.1;Parent=gene-RM610_RS07700;Dbxref=GenBank:WP_107358382.1;Name=WP_107358382.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=RM610_RS07700;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_107358382.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 197389 198141 . - . ID=gene-RM610_RS07705;Name=RM610_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07705;old_locus_tag=RM610_07730 NZ_JAVRJX010000002.1 Protein Homology CDS 197389 198141 . - 0 ID=cds-WP_107381106.1;Parent=gene-RM610_RS07705;Dbxref=GenBank:WP_107381106.1;Name=WP_107381106.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219495.1;locus_tag=RM610_RS07705;product=sirohydrochlorin chelatase;protein_id=WP_107381106.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 198264 198812 . - . ID=gene-RM610_RS07710;Name=RM610_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07710;old_locus_tag=RM610_07735 NZ_JAVRJX010000002.1 Protein Homology CDS 198264 198812 . - 0 ID=cds-WP_105986218.1;Parent=gene-RM610_RS07710;Dbxref=GenBank:WP_105986218.1;Name=WP_105986218.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166527.1;locus_tag=RM610_RS07710;product=GNAT family N-acetyltransferase;protein_id=WP_105986218.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 198909 199727 . - . ID=gene-RM610_RS07715;Name=RM610_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07715;old_locus_tag=RM610_07740 NZ_JAVRJX010000002.1 Protein Homology CDS 198909 199727 . - 0 ID=cds-WP_107369481.1;Parent=gene-RM610_RS07715;Dbxref=GenBank:WP_107369481.1;Name=WP_107369481.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384094.1;locus_tag=RM610_RS07715;product=formate/nitrite transporter family protein;protein_id=WP_107369481.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 199998 200177 . - . ID=gene-RM610_RS07720;Name=RM610_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07720;old_locus_tag=RM610_07745 NZ_JAVRJX010000002.1 Protein Homology CDS 199998 200177 . - 0 ID=cds-WP_037575130.1;Parent=gene-RM610_RS07720;Dbxref=GenBank:WP_037575130.1;Name=WP_037575130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384095.1;locus_tag=RM610_RS07720;product=hypothetical protein;protein_id=WP_037575130.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 200361 201887 . - . ID=gene-RM610_RS07725;Name=RM610_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07725;old_locus_tag=RM610_07750 NZ_JAVRJX010000002.1 Protein Homology CDS 200361 201887 . - 0 ID=cds-WP_107381107.1;Parent=gene-RM610_RS07725;Dbxref=GenBank:WP_107381107.1;Name=WP_107381107.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511671.1;locus_tag=RM610_RS07725;product=SLC13 family permease;protein_id=WP_107381107.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 202011 202769 . - . ID=gene-RM610_RS07730;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=RM610_RS07730;old_locus_tag=RM610_07755 NZ_JAVRJX010000002.1 Protein Homology CDS 202011 202769 . - 0 ID=cds-WP_107381108.1;Parent=gene-RM610_RS07730;Dbxref=GenBank:WP_107381108.1;Name=WP_107381108.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383132.1;locus_tag=RM610_RS07730;product=nicotinamide riboside transporter PnuC;protein_id=WP_107381108.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 202798 203808 . - . ID=gene-RM610_RS07735;Name=RM610_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07735;old_locus_tag=RM610_07760 NZ_JAVRJX010000002.1 Protein Homology CDS 202798 203808 . - 0 ID=cds-WP_311542070.1;Parent=gene-RM610_RS07735;Dbxref=GenBank:WP_311542070.1;Name=WP_311542070.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469115.1;locus_tag=RM610_RS07735;product=PTS sugar transporter subunit IIC;protein_id=WP_311542070.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 204640 206127 . + . ID=gene-RM610_RS07740;Name=RM610_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07740;old_locus_tag=RM610_07765 NZ_JAVRJX010000002.1 Protein Homology CDS 204640 206127 . + 0 ID=cds-WP_311542071.1;Parent=gene-RM610_RS07740;Dbxref=GenBank:WP_311542071.1;Name=WP_311542071.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=RM610_RS07740;product=aldehyde dehydrogenase family protein;protein_id=WP_311542071.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 206170 206982 . - . ID=gene-RM610_RS07745;Name=RM610_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07745;old_locus_tag=RM610_07770 NZ_JAVRJX010000002.1 Protein Homology CDS 206170 206982 . - 0 ID=cds-WP_107358370.1;Parent=gene-RM610_RS07745;Dbxref=GenBank:WP_107358370.1;Name=WP_107358370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464550.1;locus_tag=RM610_RS07745;product=putative phosphoesterase;protein_id=WP_107358370.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 207385 208416 . + . ID=gene-RM610_RS07750;Name=RM610_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07750;old_locus_tag=RM610_07775 NZ_JAVRJX010000002.1 Protein Homology CDS 207385 208416 . + 0 ID=cds-WP_037575148.1;Parent=gene-RM610_RS07750;Dbxref=GenBank:WP_037575148.1;Name=WP_037575148.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=RM610_RS07750;product=PTS sugar transporter subunit IIC;protein_id=WP_037575148.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 208431 209108 . + . ID=gene-RM610_RS07755;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM610_RS07755;old_locus_tag=RM610_07780 NZ_JAVRJX010000002.1 Protein Homology CDS 208431 209108 . + 0 ID=cds-WP_107381804.1;Parent=gene-RM610_RS07755;Dbxref=GenBank:WP_107381804.1;Name=WP_107381804.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384715.1;locus_tag=RM610_RS07755;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_107381804.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 209124 210023 . + . ID=gene-RM610_RS07760;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM610_RS07760;old_locus_tag=RM610_07785 NZ_JAVRJX010000002.1 Protein Homology CDS 209124 210023 . + 0 ID=cds-WP_107359130.1;Parent=gene-RM610_RS07760;Dbxref=GenBank:WP_107359130.1;Name=WP_107359130.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=RM610_RS07760;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_107359130.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 210080 210328 . - . ID=gene-RM610_RS07765;Name=RM610_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07765;old_locus_tag=RM610_07790 NZ_JAVRJX010000002.1 Protein Homology CDS 210080 210328 . - 0 ID=cds-WP_311542072.1;Parent=gene-RM610_RS07765;Dbxref=GenBank:WP_311542072.1;Name=WP_311542072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166516.1;locus_tag=RM610_RS07765;product=hypothetical protein;protein_id=WP_311542072.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 210585 211058 . + . ID=gene-RM610_RS07770;Name=RM610_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07770;old_locus_tag=RM610_07795 NZ_JAVRJX010000002.1 Protein Homology CDS 210585 211058 . + 0 ID=cds-WP_107359129.1;Parent=gene-RM610_RS07770;Dbxref=GenBank:WP_107359129.1;Name=WP_107359129.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM610_RS07770;product=PTS sugar transporter subunit IIA;protein_id=WP_107359129.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 211078 211380 . + . ID=gene-RM610_RS07775;Name=RM610_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07775;old_locus_tag=RM610_07800 NZ_JAVRJX010000002.1 Protein Homology CDS 211078 211380 . + 0 ID=cds-WP_107364287.1;Parent=gene-RM610_RS07775;Dbxref=GenBank:WP_107364287.1;Name=WP_107364287.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018662696.1;locus_tag=RM610_RS07775;product=PTS sugar transporter subunit IIB;protein_id=WP_107364287.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 211406 212812 . + . ID=gene-RM610_RS07780;Name=RM610_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07780;old_locus_tag=RM610_07805 NZ_JAVRJX010000002.1 Protein Homology CDS 211406 212812 . + 0 ID=cds-WP_107375457.1;Parent=gene-RM610_RS07780;Dbxref=GenBank:WP_107375457.1;Name=WP_107375457.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018665401.1;locus_tag=RM610_RS07780;product=PTS transporter subunit IIC;protein_id=WP_107375457.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 212875 214008 . - . ID=gene-RM610_RS07785;Name=RM610_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07785;old_locus_tag=RM610_07810 NZ_JAVRJX010000002.1 GeneMarkS-2+ CDS 212875 214008 . - 0 ID=cds-WP_107359126.1;Parent=gene-RM610_RS07785;Dbxref=GenBank:WP_107359126.1;Name=WP_107359126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07785;product=Rho termination factor N-terminal domain-containing protein;protein_id=WP_107359126.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 214310 214975 . - . ID=gene-RM610_RS07790;Name=RM610_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07790;old_locus_tag=RM610_07815 NZ_JAVRJX010000002.1 Protein Homology CDS 214310 214975 . - 0 ID=cds-WP_105986203.1;Parent=gene-RM610_RS07790;Dbxref=GenBank:WP_105986203.1;Name=WP_105986203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465343.1;locus_tag=RM610_RS07790;product=SDR family oxidoreductase;protein_id=WP_105986203.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 215306 217555 . + . ID=gene-RM610_RS07795;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=RM610_RS07795;old_locus_tag=RM610_07820 NZ_JAVRJX010000002.1 Protein Homology CDS 215306 217555 . + 0 ID=cds-WP_311542073.1;Parent=gene-RM610_RS07795;Dbxref=GenBank:WP_311542073.1;Name=WP_311542073.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485526.1;locus_tag=RM610_RS07795;product=formate C-acetyltransferase;protein_id=WP_311542073.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 217595 218359 . + . ID=gene-RM610_RS07800;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=RM610_RS07800;old_locus_tag=RM610_07825 NZ_JAVRJX010000002.1 Protein Homology CDS 217595 218359 . + 0 ID=cds-WP_107359123.1;Parent=gene-RM610_RS07800;Dbxref=GenBank:WP_107359123.1;Name=WP_107359123.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169535.1;locus_tag=RM610_RS07800;product=pyruvate formate-lyase-activating protein;protein_id=WP_107359123.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 218753 219826 . - . ID=gene-RM610_RS07805;Name=RM610_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07805;old_locus_tag=RM610_07830 NZ_JAVRJX010000002.1 Protein Homology CDS 218753 219826 . - 0 ID=cds-WP_107369489.1;Parent=gene-RM610_RS07805;Dbxref=GenBank:WP_107369489.1;Name=WP_107369489.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426164.1;locus_tag=RM610_RS07805;product=PTS sugar transporter subunit IIC;protein_id=WP_107369489.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 220046 221137 . - . ID=gene-RM610_RS07810;Name=RM610_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07810;old_locus_tag=RM610_07835 NZ_JAVRJX010000002.1 Protein Homology CDS 220046 221137 . - 0 ID=cds-WP_311542074.1;Parent=gene-RM610_RS07810;Dbxref=GenBank:WP_311542074.1;Name=WP_311542074.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382232.1;locus_tag=RM610_RS07810;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_311542074.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 221473 222162 . + . ID=gene-RM610_RS07815;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=RM610_RS07815;old_locus_tag=RM610_07840 NZ_JAVRJX010000002.1 Protein Homology CDS 221473 222162 . + 0 ID=cds-WP_107359120.1;Parent=gene-RM610_RS07815;Dbxref=GenBank:WP_107359120.1;Name=WP_107359120.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472382.1;locus_tag=RM610_RS07815;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_107359120.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 222230 223369 . - . ID=gene-RM610_RS07820;Name=RM610_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07820;old_locus_tag=RM610_07845 NZ_JAVRJX010000002.1 Protein Homology CDS 222230 223369 . - 0 ID=cds-WP_375712221.1;Parent=gene-RM610_RS07820;Dbxref=GenBank:WP_375712221.1;Name=WP_375712221.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501186.1;locus_tag=RM610_RS07820;product=glycerate kinase;protein_id=WP_375712221.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 223448 224047 . - . ID=gene-RM610_RS07825;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=RM610_RS07825;old_locus_tag=RM610_07850 NZ_JAVRJX010000002.1 Protein Homology CDS 223448 224047 . - 0 ID=cds-WP_311542075.1;Parent=gene-RM610_RS07825;Dbxref=GenBank:WP_311542075.1;Name=WP_311542075.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382165.1;locus_tag=RM610_RS07825;product=class A sortase SrtA;protein_id=WP_311542075.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 224467 224652 . - . ID=gene-RM610_RS12060;Name=RM610_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12060 NZ_JAVRJX010000002.1 Protein Homology CDS 224467 224652 . - 0 ID=cds-WP_375712512.1;Parent=gene-RM610_RS12060;Dbxref=GenBank:WP_375712512.1;Name=WP_375712512.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM610_RS12060;product=MFS transporter;protein_id=WP_375712512.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq pseudogene 224674 225773 . - . ID=gene-RM610_RS07830;Name=RM610_RS07830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS07830;old_locus_tag=RM610_07855;partial=true;pseudo=true;start_range=.,224674 NZ_JAVRJX010000002.1 Protein Homology CDS 224674 225773 . - 0 ID=cds-RM610_RS07830;Parent=gene-RM610_RS07830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM610_RS07830;partial=true;product=MFS transporter;pseudo=true;start_range=.,224674;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 226408 227607 . - . ID=gene-RM610_RS07835;Name=RM610_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07835;old_locus_tag=RM610_07860 NZ_JAVRJX010000002.1 Protein Homology CDS 226408 227607 . - 0 ID=cds-WP_107381445.1;Parent=gene-RM610_RS07835;Dbxref=GenBank:WP_107381445.1;Name=WP_107381445.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426155.1;locus_tag=RM610_RS07835;product=MFS transporter;protein_id=WP_107381445.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 227871 229829 . + . ID=gene-RM610_RS07840;Name=RM610_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07840;old_locus_tag=RM610_07865 NZ_JAVRJX010000002.1 Protein Homology CDS 227871 229829 . + 0 ID=cds-WP_107369495.1;Parent=gene-RM610_RS07840;Dbxref=GenBank:WP_107369495.1;Name=WP_107369495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426154.1;locus_tag=RM610_RS07840;product=fructose-1%2C6-bisphosphatase;protein_id=WP_107369495.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 230236 231627 . + . ID=gene-RM610_RS07845;Name=RM610_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07845;old_locus_tag=RM610_07870 NZ_JAVRJX010000002.1 Protein Homology CDS 230236 231627 . + 0 ID=cds-WP_107359114.1;Parent=gene-RM610_RS07845;Dbxref=GenBank:WP_107359114.1;Name=WP_107359114.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548016.1;locus_tag=RM610_RS07845;product=alanine/glycine:cation symporter family protein;protein_id=WP_107359114.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 231714 232142 . + . ID=gene-RM610_RS07850;Name=RM610_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07850;old_locus_tag=RM610_07875 NZ_JAVRJX010000002.1 Protein Homology CDS 231714 232142 . + 0 ID=cds-WP_105986192.1;Parent=gene-RM610_RS07850;Dbxref=GenBank:WP_105986192.1;Name=WP_105986192.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=RM610_RS07850;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_105986192.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 232191 232562 . + . ID=gene-RM610_RS07855;Name=RM610_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07855;old_locus_tag=RM610_07880 NZ_JAVRJX010000002.1 Protein Homology CDS 232191 232562 . + 0 ID=cds-WP_107359113.1;Parent=gene-RM610_RS07855;Dbxref=GenBank:WP_107359113.1;Name=WP_107359113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166343.1;locus_tag=RM610_RS07855;product=VOC family protein;protein_id=WP_107359113.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 232687 233430 . + . ID=gene-RM610_RS07860;Name=RM610_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07860;old_locus_tag=RM610_07885 NZ_JAVRJX010000002.1 Protein Homology CDS 232687 233430 . + 0 ID=cds-WP_311542076.1;Parent=gene-RM610_RS07860;Dbxref=GenBank:WP_311542076.1;Name=WP_311542076.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF019359.7;locus_tag=RM610_RS07860;product=MerR family transcriptional regulator;protein_id=WP_311542076.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 233528 235312 . - . ID=gene-RM610_RS07865;Name=RM610_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07865;old_locus_tag=RM610_07890 NZ_JAVRJX010000002.1 Protein Homology CDS 233528 235312 . - 0 ID=cds-WP_311542077.1;Parent=gene-RM610_RS07865;Dbxref=GenBank:WP_311542077.1;Name=WP_311542077.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548609.1;locus_tag=RM610_RS07865;product=ABC transporter ATP-binding protein;protein_id=WP_311542077.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 235309 237087 . - . ID=gene-RM610_RS07870;Name=RM610_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07870;old_locus_tag=RM610_07895 NZ_JAVRJX010000002.1 Protein Homology CDS 235309 237087 . - 0 ID=cds-WP_311542078.1;Parent=gene-RM610_RS07870;Dbxref=GenBank:WP_311542078.1;Name=WP_311542078.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020008593.1;locus_tag=RM610_RS07870;product=ABC transporter ATP-binding protein;protein_id=WP_311542078.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 237239 237844 . + . ID=gene-RM610_RS07875;Name=RM610_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07875;old_locus_tag=RM610_07900 NZ_JAVRJX010000002.1 Protein Homology CDS 237239 237844 . + 0 ID=cds-WP_107359109.1;Parent=gene-RM610_RS07875;Dbxref=GenBank:WP_107359109.1;Name=WP_107359109.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM610_RS07875;product=GNAT family N-acetyltransferase;protein_id=WP_107359109.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 238044 238472 . + . ID=gene-RM610_RS07880;Name=RM610_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07880;old_locus_tag=RM610_07905 NZ_JAVRJX010000002.1 Protein Homology CDS 238044 238472 . + 0 ID=cds-WP_311542079.1;Parent=gene-RM610_RS07880;Dbxref=GenBank:WP_311542079.1;Name=WP_311542079.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=RM610_RS07880;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_311542079.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 238879 239586 . - . ID=gene-RM610_RS07885;Name=RM610_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07885;old_locus_tag=RM610_07910 NZ_JAVRJX010000002.1 Protein Homology CDS 238879 239586 . - 0 ID=cds-WP_311542080.1;Parent=gene-RM610_RS07885;Dbxref=GenBank:WP_311542080.1;Name=WP_311542080.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426148.1;locus_tag=RM610_RS07885;product=HAD family hydrolase;protein_id=WP_311542080.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 239748 240485 . - . ID=gene-RM610_RS07890;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=RM610_RS07890;old_locus_tag=RM610_07915 NZ_JAVRJX010000002.1 Protein Homology CDS 239748 240485 . - 0 ID=cds-WP_311542081.1;Parent=gene-RM610_RS07890;Dbxref=GenBank:WP_311542081.1;Name=WP_311542081.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383990.1;locus_tag=RM610_RS07890;product=tryptophan synthase subunit alpha;protein_id=WP_311542081.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 240478 241692 . - . ID=gene-RM610_RS07895;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=RM610_RS07895;old_locus_tag=RM610_07920 NZ_JAVRJX010000002.1 Protein Homology CDS 240478 241692 . - 0 ID=cds-WP_375712220.1;Parent=gene-RM610_RS07895;Dbxref=GenBank:WP_375712220.1;Name=WP_375712220.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507663.1;locus_tag=RM610_RS07895;product=tryptophan synthase subunit beta;protein_id=WP_375712220.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 241689 242318 . - . ID=gene-RM610_RS07900;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=RM610_RS07900;old_locus_tag=RM610_07925 NZ_JAVRJX010000002.1 Protein Homology CDS 241689 242318 . - 0 ID=cds-WP_311542082.1;Parent=gene-RM610_RS07900;Dbxref=GenBank:WP_311542082.1;Name=WP_311542082.1;Ontology_term=GO:0004640;gbkey=CDS;gene=trpF;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=RM610_RS07900;product=phosphoribosylanthranilate isomerase;protein_id=WP_311542082.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 242324 243100 . - . ID=gene-RM610_RS07905;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=RM610_RS07905;old_locus_tag=RM610_07930 NZ_JAVRJX010000002.1 Protein Homology CDS 242324 243100 . - 0 ID=cds-WP_311542083.1;Parent=gene-RM610_RS07905;Dbxref=GenBank:WP_311542083.1;Name=WP_311542083.1;Ontology_term=GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433850.1;locus_tag=RM610_RS07905;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_311542083.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 243084 244100 . - . ID=gene-RM610_RS07910;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=RM610_RS07910;old_locus_tag=RM610_07935 NZ_JAVRJX010000002.1 Protein Homology CDS 243084 244100 . - 0 ID=cds-WP_311542084.1;Parent=gene-RM610_RS07910;Dbxref=GenBank:WP_311542084.1;Name=WP_311542084.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724414.1;locus_tag=RM610_RS07910;product=anthranilate phosphoribosyltransferase;protein_id=WP_311542084.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 244087 244668 . - . ID=gene-RM610_RS07915;Name=RM610_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07915;old_locus_tag=RM610_07940 NZ_JAVRJX010000002.1 Protein Homology CDS 244087 244668 . - 0 ID=cds-WP_107369591.1;Parent=gene-RM610_RS07915;Dbxref=GenBank:WP_107369591.1;Name=WP_107369591.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=RM610_RS07915;product=anthranilate synthase component II;protein_id=WP_107369591.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 244665 246068 . - . ID=gene-RM610_RS07920;Name=RM610_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07920;old_locus_tag=RM610_07945 NZ_JAVRJX010000002.1 Protein Homology CDS 244665 246068 . - 0 ID=cds-WP_119523948.1;Parent=gene-RM610_RS07920;Dbxref=GenBank:WP_119523948.1;Name=WP_119523948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=RM610_RS07920;product=anthranilate synthase component I;protein_id=WP_119523948.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 246547 248187 . - . ID=gene-RM610_RS07925;Name=RM610_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07925;old_locus_tag=RM610_07950 NZ_JAVRJX010000002.1 Protein Homology CDS 246547 248187 . - 0 ID=cds-WP_107369589.1;Parent=gene-RM610_RS07925;Dbxref=GenBank:WP_107369589.1;Name=WP_107369589.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813558.1;locus_tag=RM610_RS07925;product=alpha-keto acid decarboxylase family protein;protein_id=WP_107369589.1;transl_table=11 NZ_JAVRJX010000002.1 RefSeq gene 248414 250180 . - . ID=gene-RM610_RS07930;Name=RM610_RS07930;end_range=250180,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07930;old_locus_tag=RM610_07955;partial=true NZ_JAVRJX010000002.1 Protein Homology CDS 248414 250180 . - 0 ID=cds-WP_311542085.1;Parent=gene-RM610_RS07930;Dbxref=GenBank:WP_311542085.1;Name=WP_311542085.1;end_range=250180,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM610_RS07930;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311542085.1;transl_table=11 ##sequence-region NZ_JAVRJX010000003.1 1 249536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000003.1 RefSeq region 1 249536 . + . ID=NZ_JAVRJX010000003.1:1..249536;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000003.1 RefSeq gene 197 580 . - . ID=gene-RM610_RS07935;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=RM610_RS07935;old_locus_tag=RM610_07960 NZ_JAVRJX010000003.1 Protein Homology CDS 197 580 . - 0 ID=cds-WP_311542091.1;Parent=gene-RM610_RS07935;Dbxref=GenBank:WP_311542091.1;Name=WP_311542091.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=RM610_RS07935;product=aspartate 1-decarboxylase;protein_id=WP_311542091.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 577 1434 . - . ID=gene-RM610_RS07940;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=RM610_RS07940;old_locus_tag=RM610_07965 NZ_JAVRJX010000003.1 Protein Homology CDS 577 1434 . - 0 ID=cds-WP_311542092.1;Parent=gene-RM610_RS07940;Dbxref=GenBank:WP_311542092.1;Name=WP_311542092.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166913.1;locus_tag=RM610_RS07940;product=pantoate--beta-alanine ligase;protein_id=WP_311542092.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 1427 2239 . - . ID=gene-RM610_RS07945;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=RM610_RS07945;old_locus_tag=RM610_07970 NZ_JAVRJX010000003.1 Protein Homology CDS 1427 2239 . - 0 ID=cds-WP_107381090.1;Parent=gene-RM610_RS07945;Dbxref=GenBank:WP_107381090.1;Name=WP_107381090.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431941.1;locus_tag=RM610_RS07945;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_107381090.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 2306 3178 . + . ID=gene-RM610_RS07950;Name=RM610_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07950;old_locus_tag=RM610_07975 NZ_JAVRJX010000003.1 Protein Homology CDS 2306 3178 . + 0 ID=cds-WP_311542093.1;Parent=gene-RM610_RS07950;Dbxref=GenBank:WP_311542093.1;Name=WP_311542093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425627.1;locus_tag=RM610_RS07950;product=oxidoreductase;protein_id=WP_311542093.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 3202 3753 . - . ID=gene-RM610_RS07955;Name=RM610_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07955;old_locus_tag=RM610_07980 NZ_JAVRJX010000003.1 Protein Homology CDS 3202 3753 . - 0 ID=cds-WP_107358825.1;Parent=gene-RM610_RS07955;Dbxref=GenBank:WP_107358825.1;Name=WP_107358825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723305.1;locus_tag=RM610_RS07955;product=hypothetical protein;protein_id=WP_107358825.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 3831 4019 . - . ID=gene-RM610_RS07960;Name=RM610_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07960;old_locus_tag=RM610_07985 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 3831 4019 . - 0 ID=cds-WP_105963131.1;Parent=gene-RM610_RS07960;Dbxref=GenBank:WP_105963131.1;Name=WP_105963131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07960;product=hypothetical protein;protein_id=WP_105963131.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 4047 4361 . - . ID=gene-RM610_RS07965;Name=RM610_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07965;old_locus_tag=RM610_07990 NZ_JAVRJX010000003.1 Protein Homology CDS 4047 4361 . - 0 ID=cds-WP_105963130.1;Parent=gene-RM610_RS07965;Dbxref=GenBank:WP_105963130.1;Name=WP_105963130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912747.1;locus_tag=RM610_RS07965;product=DMT family transporter;protein_id=WP_105963130.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 4362 4682 . - . ID=gene-RM610_RS07970;Name=RM610_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07970;old_locus_tag=RM610_07995 NZ_JAVRJX010000003.1 Protein Homology CDS 4362 4682 . - 0 ID=cds-WP_037575517.1;Parent=gene-RM610_RS07970;Dbxref=GenBank:WP_037575517.1;Name=WP_037575517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006903.1;locus_tag=RM610_RS07970;product=DMT family transporter;protein_id=WP_037575517.1;transl_table=11 NZ_JAVRJX010000003.1 cmsearch riboswitch 4732 4836 . - . ID=id-NZ_JAVRJX010000003.1:4732..4836;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00442,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000003.1 RefSeq gene 5605 6279 . - . ID=gene-RM610_RS07975;Name=RM610_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07975;old_locus_tag=RM610_08000 NZ_JAVRJX010000003.1 Protein Homology CDS 5605 6279 . - 0 ID=cds-WP_311542094.1;Parent=gene-RM610_RS07975;Dbxref=GenBank:WP_311542094.1;Name=WP_311542094.1;Ontology_term=GO:0000272,GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA,obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: protein motif:HMM:NF012377.7;locus_tag=RM610_RS07975;product=glycoside hydrolase family 5 protein;protein_id=WP_311542094.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 6455 6670 . + . ID=gene-RM610_RS07980;Name=RM610_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07980;old_locus_tag=RM610_08005 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 6455 6670 . + 0 ID=cds-WP_311542095.1;Parent=gene-RM610_RS07980;Dbxref=GenBank:WP_311542095.1;Name=WP_311542095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07980;product=hypothetical protein;protein_id=WP_311542095.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 6667 6906 . + . ID=gene-RM610_RS12065;Name=RM610_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12065;old_locus_tag=RM610_08010 NZ_JAVRJX010000003.1 Protein Homology CDS 6667 6906 . + 0 ID=cds-WP_375712206.1;Parent=gene-RM610_RS12065;Dbxref=GenBank:WP_375712206.1;Name=WP_375712206.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.7;locus_tag=RM610_RS12065;product=transposase;protein_id=WP_375712206.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 7231 7410 . - . ID=gene-RM610_RS07985;Name=RM610_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07985;old_locus_tag=RM610_08015 NZ_JAVRJX010000003.1 Protein Homology CDS 7231 7410 . - 0 ID=cds-WP_107369275.1;Parent=gene-RM610_RS07985;Dbxref=GenBank:WP_107369275.1;Name=WP_107369275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477739.1;locus_tag=RM610_RS07985;product=hypothetical protein;protein_id=WP_107369275.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 7435 7971 . - . ID=gene-RM610_RS07990;Name=RM610_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS07990;old_locus_tag=RM610_08020 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 7435 7971 . - 0 ID=cds-WP_311542096.1;Parent=gene-RM610_RS07990;Dbxref=GenBank:WP_311542096.1;Name=WP_311542096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS07990;product=hypothetical protein;protein_id=WP_311542096.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 8415 8904 . + . ID=gene-RM610_RS07995;Name=RM610_RS07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS07995;old_locus_tag=RM610_08025;pseudo=true NZ_JAVRJX010000003.1 Protein Homology CDS 8415 8904 . + 0 ID=cds-RM610_RS07995;Parent=gene-RM610_RS07995;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837446.1;locus_tag=RM610_RS07995;product=recombinase family protein;pseudo=true;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 9699 10307 . + . ID=gene-RM610_RS08000;Name=RM610_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08000;old_locus_tag=RM610_08030 NZ_JAVRJX010000003.1 Protein Homology CDS 9699 10307 . + 0 ID=cds-WP_311542097.1;Parent=gene-RM610_RS08000;Dbxref=GenBank:WP_311542097.1;Name=WP_311542097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454657.1;locus_tag=RM610_RS08000;product=stage II sporulation protein M;protein_id=WP_311542097.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 10443 10691 . + . ID=gene-RM610_RS08005;Name=RM610_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08005;old_locus_tag=RM610_08035 NZ_JAVRJX010000003.1 Protein Homology CDS 10443 10691 . + 0 ID=cds-WP_311542098.1;Parent=gene-RM610_RS08005;Dbxref=GenBank:WP_311542098.1;Name=WP_311542098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638433.1;locus_tag=RM610_RS08005;product=hypothetical protein;protein_id=WP_311542098.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 10857 11018 . + . ID=gene-RM610_RS08010;Name=RM610_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08010;old_locus_tag=RM610_08040 NZ_JAVRJX010000003.1 Protein Homology CDS 10857 11018 . + 0 ID=cds-WP_233649497.1;Parent=gene-RM610_RS08010;Dbxref=GenBank:WP_233649497.1;Name=WP_233649497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167674.1;locus_tag=RM610_RS08010;product=hypothetical protein;protein_id=WP_233649497.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 11468 11707 . - . ID=gene-RM610_RS08015;Name=RM610_RS08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS08015;old_locus_tag=RM610_08045;partial=true;pseudo=true;start_range=.,11468 NZ_JAVRJX010000003.1 Protein Homology CDS 11468 11707 . - 0 ID=cds-RM610_RS08015;Parent=gene-RM610_RS08015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501230.1;locus_tag=RM610_RS08015;partial=true;product=hypothetical protein;pseudo=true;start_range=.,11468;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 11942 12043 . + . ID=gene-RM610_RS08020;Name=RM610_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08020;old_locus_tag=RM610_08050 NZ_JAVRJX010000003.1 Protein Homology CDS 11942 12043 . + 0 ID=cds-WP_311542099.1;Parent=gene-RM610_RS08020;Dbxref=GenBank:WP_311542099.1;Name=WP_311542099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM610_RS08020;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_311542099.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 12348 13559 . - . ID=gene-RM610_RS08025;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=RM610_RS08025;old_locus_tag=RM610_08055 NZ_JAVRJX010000003.1 Protein Homology CDS 12348 13559 . - 0 ID=cds-WP_311542100.1;Parent=gene-RM610_RS08025;Dbxref=GenBank:WP_311542100.1;Name=WP_311542100.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005827923.1;locus_tag=RM610_RS08025;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_311542100.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 13574 14311 . - . ID=gene-RM610_RS08030;Name=RM610_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08030;old_locus_tag=RM610_08060 NZ_JAVRJX010000003.1 Protein Homology CDS 13574 14311 . - 0 ID=cds-WP_107375777.1;Parent=gene-RM610_RS08030;Dbxref=GenBank:WP_107375777.1;Name=WP_107375777.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=RM610_RS08030;product=ABC transporter ATP-binding protein;protein_id=WP_107375777.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 14305 15123 . - . ID=gene-RM610_RS08035;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=RM610_RS08035;old_locus_tag=RM610_08065 NZ_JAVRJX010000003.1 Protein Homology CDS 14305 15123 . - 0 ID=cds-WP_107358797.1;Parent=gene-RM610_RS08035;Dbxref=GenBank:WP_107358797.1;Name=WP_107358797.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=RM610_RS08035;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_107358797.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 15120 15986 . - . ID=gene-RM610_RS08040;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=RM610_RS08040;old_locus_tag=RM610_08070 NZ_JAVRJX010000003.1 Protein Homology CDS 15120 15986 . - 0 ID=cds-WP_107358796.1;Parent=gene-RM610_RS08040;Dbxref=GenBank:WP_107358796.1;Name=WP_107358796.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444882.1;locus_tag=RM610_RS08040;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_107358796.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 15987 16919 . - . ID=gene-RM610_RS08045;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=RM610_RS08045;old_locus_tag=RM610_08075 NZ_JAVRJX010000003.1 Protein Homology CDS 15987 16919 . - 0 ID=cds-WP_107358795.1;Parent=gene-RM610_RS08045;Dbxref=GenBank:WP_107358795.1;Name=WP_107358795.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425637.1;locus_tag=RM610_RS08045;product=nickel/cobalt ABC transporter permease;protein_id=WP_107358795.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 16932 18530 . - . ID=gene-RM610_RS08050;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=RM610_RS08050;old_locus_tag=RM610_08080 NZ_JAVRJX010000003.1 Protein Homology CDS 16932 18530 . - 0 ID=cds-WP_311542101.1;Parent=gene-RM610_RS08050;Dbxref=GenBank:WP_311542101.1;Name=WP_311542101.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=RM610_RS08050;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_311542101.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 18560 19852 . - . ID=gene-RM610_RS08055;Name=RM610_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08055;old_locus_tag=RM610_08085 NZ_JAVRJX010000003.1 Protein Homology CDS 18560 19852 . - 0 ID=cds-WP_311542102.1;Parent=gene-RM610_RS08055;Dbxref=GenBank:WP_311542102.1;Name=WP_311542102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425639.1;locus_tag=RM610_RS08055;product=opine metallophore biosynthesis dehydrogenase;protein_id=WP_311542102.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 19849 20676 . - . ID=gene-RM610_RS08060;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=RM610_RS08060;old_locus_tag=RM610_08090 NZ_JAVRJX010000003.1 Protein Homology CDS 19849 20676 . - 0 ID=cds-WP_107369285.1;Parent=gene-RM610_RS08060;Dbxref=GenBank:WP_107369285.1;Name=WP_107369285.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444886.1;locus_tag=RM610_RS08060;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_107369285.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 20686 21495 . - . ID=gene-RM610_RS08065;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=RM610_RS08065;old_locus_tag=RM610_08095 NZ_JAVRJX010000003.1 Protein Homology CDS 20686 21495 . - 0 ID=cds-WP_311542103.1;Parent=gene-RM610_RS08065;Dbxref=GenBank:WP_311542103.1;Name=WP_311542103.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166931.1;locus_tag=RM610_RS08065;product=histidine racemase CntK;protein_id=WP_311542103.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 21744 22454 . + . ID=gene-RM610_RS08070;Name=RM610_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08070;old_locus_tag=RM610_08100 NZ_JAVRJX010000003.1 Protein Homology CDS 21744 22454 . + 0 ID=cds-WP_107375771.1;Parent=gene-RM610_RS08070;Dbxref=GenBank:WP_107375771.1;Name=WP_107375771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899698.1;locus_tag=RM610_RS08070;product=hypothetical protein;protein_id=WP_107375771.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 22497 23180 . - . ID=gene-RM610_RS08075;Name=RM610_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08075;old_locus_tag=RM610_08105 NZ_JAVRJX010000003.1 Protein Homology CDS 22497 23180 . - 0 ID=cds-WP_107375770.1;Parent=gene-RM610_RS08075;Dbxref=GenBank:WP_107375770.1;Name=WP_107375770.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728988.1;locus_tag=RM610_RS08075;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_107375770.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 23353 23910 . + . ID=gene-RM610_RS08080;Name=RM610_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08080;old_locus_tag=RM610_08110 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 23353 23910 . + 0 ID=cds-WP_311542104.1;Parent=gene-RM610_RS08080;Dbxref=GenBank:WP_311542104.1;Name=WP_311542104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08080;product=hypothetical protein;protein_id=WP_311542104.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 23955 25553 . - . ID=gene-RM610_RS08085;Name=RM610_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08085;old_locus_tag=RM610_08115 NZ_JAVRJX010000003.1 Protein Homology CDS 23955 25553 . - 0 ID=cds-WP_311542105.1;Parent=gene-RM610_RS08085;Dbxref=GenBank:WP_311542105.1;Name=WP_311542105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020344.7;locus_tag=RM610_RS08085;product=coagulase domain-containing protein;protein_id=WP_311542105.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 26071 26391 . - . ID=gene-RM610_RS08090;Name=RM610_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08090;old_locus_tag=RM610_08120 NZ_JAVRJX010000003.1 Protein Homology CDS 26071 26391 . - 0 ID=cds-WP_037575490.1;Parent=gene-RM610_RS08090;Dbxref=GenBank:WP_037575490.1;Name=WP_037575490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498730.1;locus_tag=RM610_RS08090;product=antibiotic biosynthesis monooxygenase;protein_id=WP_037575490.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 26544 26975 . - . ID=gene-RM610_RS08095;Name=RM610_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08095;old_locus_tag=RM610_08125 NZ_JAVRJX010000003.1 Protein Homology CDS 26544 26975 . - 0 ID=cds-WP_107369291.1;Parent=gene-RM610_RS08095;Dbxref=GenBank:WP_107369291.1;Name=WP_107369291.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425893.1;locus_tag=RM610_RS08095;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_107369291.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 27009 28352 . - . ID=gene-RM610_RS08100;Name=RM610_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08100;old_locus_tag=RM610_08130 NZ_JAVRJX010000003.1 Protein Homology CDS 27009 28352 . - 0 ID=cds-WP_107369292.1;Parent=gene-RM610_RS08100;Dbxref=GenBank:WP_107369292.1;Name=WP_107369292.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=RM610_RS08100;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_107369292.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 28791 29138 . + . ID=gene-RM610_RS08105;Name=RM610_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08105;old_locus_tag=RM610_08135 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 28791 29138 . + 0 ID=cds-WP_107375435.1;Parent=gene-RM610_RS08105;Dbxref=GenBank:WP_107375435.1;Name=WP_107375435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08105;product=hypothetical protein;protein_id=WP_107375435.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 29192 30610 . - . ID=gene-RM610_RS08110;Name=RM610_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08110;old_locus_tag=RM610_08140 NZ_JAVRJX010000003.1 Protein Homology CDS 29192 30610 . - 0 ID=cds-WP_311542106.1;Parent=gene-RM610_RS08110;Dbxref=GenBank:WP_311542106.1;Name=WP_311542106.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656283.1;locus_tag=RM610_RS08110;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_311542106.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 30639 31601 . - . ID=gene-RM610_RS08115;Name=RM610_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08115;old_locus_tag=RM610_08145 NZ_JAVRJX010000003.1 Protein Homology CDS 30639 31601 . - 0 ID=cds-WP_311542107.1;Parent=gene-RM610_RS08115;Dbxref=GenBank:WP_311542107.1;Name=WP_311542107.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461419.1;locus_tag=RM610_RS08115;product=carbohydrate kinase family protein;protein_id=WP_311542107.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 31709 32683 . - . ID=gene-RM610_RS08120;Name=RM610_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08120;old_locus_tag=RM610_08150 NZ_JAVRJX010000003.1 Protein Homology CDS 31709 32683 . - 0 ID=cds-WP_107375432.1;Parent=gene-RM610_RS08120;Dbxref=GenBank:WP_107375432.1;Name=WP_107375432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656280.1;locus_tag=RM610_RS08120;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_107375432.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 33877 34167 . + . ID=gene-RM610_RS08125;Name=RM610_RS08125;end_range=34167,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS08125;old_locus_tag=RM610_08155;partial=true;pseudo=true NZ_JAVRJX010000003.1 Protein Homology CDS 33877 34167 . + 0 ID=cds-RM610_RS08125;Parent=gene-RM610_RS08125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=34167,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003182679.1;locus_tag=RM610_RS08125;partial=true;product=cytidine deaminase;pseudo=true;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 34357 35898 . - . ID=gene-RM610_RS08130;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=RM610_RS08130;old_locus_tag=RM610_08160 NZ_JAVRJX010000003.1 Protein Homology CDS 34357 35898 . - 0 ID=cds-WP_037575473.1;Parent=gene-RM610_RS08130;Dbxref=GenBank:WP_037575473.1;Name=WP_037575473.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=RM610_RS08130;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_037575473.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 35921 37387 . - . ID=gene-RM610_RS08135;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=RM610_RS08135;old_locus_tag=RM610_08165 NZ_JAVRJX010000003.1 Protein Homology CDS 35921 37387 . - 0 ID=cds-WP_107358781.1;Parent=gene-RM610_RS08135;Dbxref=GenBank:WP_107358781.1;Name=WP_107358781.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=RM610_RS08135;product=IMP dehydrogenase;protein_id=WP_107358781.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 37423 38691 . - . ID=gene-RM610_RS08140;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=RM610_RS08140;old_locus_tag=RM610_08170 NZ_JAVRJX010000003.1 Protein Homology CDS 37423 38691 . - 0 ID=cds-WP_105986447.1;Parent=gene-RM610_RS08140;Dbxref=GenBank:WP_105986447.1;Name=WP_105986447.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=RM610_RS08140;product=xanthine permease PbuX;protein_id=WP_105986447.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 38688 39272 . - . ID=gene-RM610_RS08145;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=RM610_RS08145;old_locus_tag=RM610_08175 NZ_JAVRJX010000003.1 Protein Homology CDS 38688 39272 . - 0 ID=cds-WP_107375431.1;Parent=gene-RM610_RS08145;Dbxref=GenBank:WP_107375431.1;Name=WP_107375431.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480340.1;locus_tag=RM610_RS08145;product=xanthine phosphoribosyltransferase;protein_id=WP_107375431.1;transl_table=11 NZ_JAVRJX010000003.1 cmsearch riboswitch 39519 39621 . - . ID=id-NZ_JAVRJX010000003.1:39519..39621;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00167,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000003.1 RefSeq gene 39865 40275 . + . ID=gene-RM610_RS08150;Name=RM610_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08150;old_locus_tag=RM610_08180 NZ_JAVRJX010000003.1 Protein Homology CDS 39865 40275 . + 0 ID=cds-WP_311542108.1;Parent=gene-RM610_RS08150;Dbxref=GenBank:WP_311542108.1;Name=WP_311542108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=RM610_RS08150;product=general stress protein;protein_id=WP_311542108.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 40524 41198 . + . ID=gene-RM610_RS08155;Name=RM610_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08155;old_locus_tag=RM610_08185 NZ_JAVRJX010000003.1 Protein Homology CDS 40524 41198 . + 0 ID=cds-WP_107369300.1;Parent=gene-RM610_RS08155;Dbxref=GenBank:WP_107369300.1;Name=WP_107369300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480338.1;locus_tag=RM610_RS08155;product=hypothetical protein;protein_id=WP_107369300.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 41311 41913 . + . ID=gene-RM610_RS08160;Name=RM610_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08160;old_locus_tag=RM610_08190 NZ_JAVRJX010000003.1 Protein Homology CDS 41311 41913 . + 0 ID=cds-WP_107358776.1;Parent=gene-RM610_RS08160;Dbxref=GenBank:WP_107358776.1;Name=WP_107358776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=RM610_RS08160;product=DNA-binding protein;protein_id=WP_107358776.1;transl_table=11 NZ_JAVRJX010000003.1 cmsearch riboswitch 41939 42041 . + . ID=id-NZ_JAVRJX010000003.1:41939..42041;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000003.1 RefSeq gene 42147 43256 . + . ID=gene-RM610_RS08165;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=RM610_RS08165;old_locus_tag=RM610_08195 NZ_JAVRJX010000003.1 Protein Homology CDS 42147 43256 . + 0 ID=cds-WP_107369302.1;Parent=gene-RM610_RS08165;Dbxref=GenBank:WP_107369302.1;Name=WP_107369302.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=RM610_RS08165;product=glycine oxidase ThiO;protein_id=WP_107369302.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 43331 44722 . + . ID=gene-RM610_RS08170;Name=RM610_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08170;old_locus_tag=RM610_08200 NZ_JAVRJX010000003.1 Protein Homology CDS 43331 44722 . + 0 ID=cds-WP_103158651.1;Parent=gene-RM610_RS08170;Dbxref=GenBank:WP_103158651.1;Name=WP_103158651.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=RM610_RS08170;product=L-cystine transporter;protein_id=WP_103158651.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 44848 45603 . - . ID=gene-RM610_RS08175;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=RM610_RS08175;old_locus_tag=RM610_08205 NZ_JAVRJX010000003.1 Protein Homology CDS 44848 45603 . - 0 ID=cds-WP_107375427.1;Parent=gene-RM610_RS08175;Dbxref=GenBank:WP_107375427.1;Name=WP_107375427.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303929.1;locus_tag=RM610_RS08175;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_107375427.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 45746 46522 . + . ID=gene-RM610_RS08180;Name=RM610_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08180;old_locus_tag=RM610_08210 NZ_JAVRJX010000003.1 Protein Homology CDS 45746 46522 . + 0 ID=cds-WP_311542109.1;Parent=gene-RM610_RS08180;Dbxref=GenBank:WP_311542109.1;Name=WP_311542109.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472380.1;locus_tag=RM610_RS08180;product=2-keto-4-pentenoate hydratase;protein_id=WP_311542109.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 46895 47464 . + . ID=gene-RM610_RS08185;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=RM610_RS08185;old_locus_tag=RM610_08215 NZ_JAVRJX010000003.1 Protein Homology CDS 46895 47464 . + 0 ID=cds-WP_037575442.1;Parent=gene-RM610_RS08185;Dbxref=GenBank:WP_037575442.1;Name=WP_037575442.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=RM610_RS08185;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_037575442.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 47711 49234 . + . ID=gene-RM610_RS08190;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=RM610_RS08190;old_locus_tag=RM610_08220 NZ_JAVRJX010000003.1 Protein Homology CDS 47711 49234 . + 0 ID=cds-WP_107375425.1;Parent=gene-RM610_RS08190;Dbxref=GenBank:WP_107375425.1;Name=WP_107375425.1;Ontology_term=GO:0000302,GO:0050660,GO:0051287,GO:0102039;gbkey=CDS;gene=ahpF;go_function=flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA,NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930502.1;locus_tag=RM610_RS08190;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_107375425.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 49452 49925 . + . ID=gene-RM610_RS08195;Name=RM610_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08195;old_locus_tag=RM610_08225 NZ_JAVRJX010000003.1 Protein Homology CDS 49452 49925 . + 0 ID=cds-WP_311542110.1;Parent=gene-RM610_RS08195;Dbxref=GenBank:WP_311542110.1;Name=WP_311542110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723560.1;locus_tag=RM610_RS08195;product=QueT transporter family protein;protein_id=WP_311542110.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 49985 50935 . - . ID=gene-RM610_RS08200;Name=RM610_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08200;old_locus_tag=RM610_08230 NZ_JAVRJX010000003.1 Protein Homology CDS 49985 50935 . - 0 ID=cds-WP_311542111.1;Parent=gene-RM610_RS08200;Dbxref=GenBank:WP_311542111.1;Name=WP_311542111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=RM610_RS08200;product=DUF1002 domain-containing protein;protein_id=WP_311542111.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 51096 52088 . - . ID=gene-RM610_RS08205;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=RM610_RS08205;old_locus_tag=RM610_08235 NZ_JAVRJX010000003.1 Protein Homology CDS 51096 52088 . - 0 ID=cds-WP_311542112.1;Parent=gene-RM610_RS08205;Dbxref=GenBank:WP_311542112.1;Name=WP_311542112.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511733.1;locus_tag=RM610_RS08205;product=biotin synthase BioB;protein_id=WP_311542112.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 52249 52920 . - . ID=gene-RM610_RS08210;Name=RM610_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08210;old_locus_tag=RM610_08240 NZ_JAVRJX010000003.1 Protein Homology CDS 52249 52920 . - 0 ID=cds-WP_311542113.1;Parent=gene-RM610_RS08210;Dbxref=GenBank:WP_311542113.1;Name=WP_311542113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.7;locus_tag=RM610_RS08210;product=PepSY domain-containing protein;protein_id=WP_311542113.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 52904 54274 . - . ID=gene-RM610_RS08215;Name=RM610_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08215;old_locus_tag=RM610_08245 NZ_JAVRJX010000003.1 Protein Homology CDS 52904 54274 . - 0 ID=cds-WP_107369310.1;Parent=gene-RM610_RS08215;Dbxref=GenBank:WP_107369310.1;Name=WP_107369310.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381579.1;locus_tag=RM610_RS08215;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_107369310.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 54279 54956 . - . ID=gene-RM610_RS08220;Name=RM610_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08220;old_locus_tag=RM610_08250 NZ_JAVRJX010000003.1 Protein Homology CDS 54279 54956 . - 0 ID=cds-WP_107358767.1;Parent=gene-RM610_RS08220;Dbxref=GenBank:WP_107358767.1;Name=WP_107358767.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511690.1;locus_tag=RM610_RS08220;product=response regulator transcription factor;protein_id=WP_107358767.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 54966 56357 . - . ID=gene-RM610_RS08225;Name=RM610_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08225;old_locus_tag=RM610_08255 NZ_JAVRJX010000003.1 Protein Homology CDS 54966 56357 . - 0 ID=cds-WP_311542114.1;Parent=gene-RM610_RS08225;Dbxref=GenBank:WP_311542114.1;Name=WP_311542114.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549922.1;locus_tag=RM610_RS08225;product=SLC13 family permease;protein_id=WP_311542114.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 56347 57567 . - . ID=gene-RM610_RS08230;Name=RM610_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08230;old_locus_tag=RM610_08260 NZ_JAVRJX010000003.1 Protein Homology CDS 56347 57567 . - 0 ID=cds-WP_107381244.1;Parent=gene-RM610_RS08230;Dbxref=GenBank:WP_107381244.1;Name=WP_107381244.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176585.1;locus_tag=RM610_RS08230;product=glycerate kinase family protein;protein_id=WP_107381244.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 57687 58844 . - . ID=gene-RM610_RS08235;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=RM610_RS08235;old_locus_tag=RM610_08265 NZ_JAVRJX010000003.1 Protein Homology CDS 57687 58844 . - 0 ID=cds-WP_311542115.1;Parent=gene-RM610_RS08235;Dbxref=GenBank:WP_311542115.1;Name=WP_311542115.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383282.1;locus_tag=RM610_RS08235;product=chromate efflux transporter;protein_id=WP_311542115.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 58855 59157 . - . ID=gene-RM610_RS08240;Name=RM610_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08240;old_locus_tag=RM610_08270 NZ_JAVRJX010000003.1 Protein Homology CDS 58855 59157 . - 0 ID=cds-WP_107358763.1;Parent=gene-RM610_RS08240;Dbxref=GenBank:WP_107358763.1;Name=WP_107358763.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506400.1;locus_tag=RM610_RS08240;product=PadR family transcriptional regulator;protein_id=WP_107358763.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 59319 59699 . + . ID=gene-RM610_RS08245;Name=RM610_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08245;old_locus_tag=RM610_08275 NZ_JAVRJX010000003.1 Protein Homology CDS 59319 59699 . + 0 ID=cds-WP_107369315.1;Parent=gene-RM610_RS08245;Dbxref=GenBank:WP_107369315.1;Name=WP_107369315.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=RM610_RS08245;product=iron chaperone;protein_id=WP_107369315.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 59790 60464 . - . ID=gene-RM610_RS08250;Name=RM610_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08250;old_locus_tag=RM610_08280 NZ_JAVRJX010000003.1 Protein Homology CDS 59790 60464 . - 0 ID=cds-WP_311542116.1;Parent=gene-RM610_RS08250;Dbxref=GenBank:WP_311542116.1;Name=WP_311542116.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM610_RS08250;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311542116.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 60612 60854 . - . ID=gene-RM610_RS08255;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=RM610_RS08255;old_locus_tag=RM610_08285 NZ_JAVRJX010000003.1 Protein Homology CDS 60612 60854 . - 0 ID=cds-WP_037565082.1;Parent=gene-RM610_RS08255;Dbxref=GenBank:WP_037565082.1;Name=WP_037565082.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=RM610_RS08255;product=30S ribosomal protein S18;protein_id=WP_037565082.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 60897 61400 . - . ID=gene-RM610_RS08260;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM610_RS08260;old_locus_tag=RM610_08290 NZ_JAVRJX010000003.1 Protein Homology CDS 60897 61400 . - 0 ID=cds-WP_037575408.1;Parent=gene-RM610_RS08260;Dbxref=GenBank:WP_037575408.1;Name=WP_037575408.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=RM610_RS08260;product=single-stranded DNA-binding protein;protein_id=WP_037575408.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 61424 61720 . - . ID=gene-RM610_RS08265;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=RM610_RS08265;old_locus_tag=RM610_08295 NZ_JAVRJX010000003.1 Protein Homology CDS 61424 61720 . - 0 ID=cds-WP_037565086.1;Parent=gene-RM610_RS08265;Dbxref=GenBank:WP_037565086.1;Name=WP_037565086.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=RM610_RS08265;product=30S ribosomal protein S6;protein_id=WP_037565086.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 62033 62668 . + . ID=gene-RM610_RS08270;Name=RM610_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08270;old_locus_tag=RM610_08300 NZ_JAVRJX010000003.1 Protein Homology CDS 62033 62668 . + 0 ID=cds-WP_107375415.1;Parent=gene-RM610_RS08270;Dbxref=GenBank:WP_107375415.1;Name=WP_107375415.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019244338.1;locus_tag=RM610_RS08270;product=NAD(P)-dependent oxidoreductase;protein_id=WP_107375415.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 62908 63129 . + . ID=gene-RM610_RS08275;Name=RM610_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08275;old_locus_tag=RM610_08305 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 62908 63129 . + 0 ID=cds-WP_107358760.1;Parent=gene-RM610_RS08275;Dbxref=GenBank:WP_107358760.1;Name=WP_107358760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08275;product=hypothetical protein;protein_id=WP_107358760.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 63239 64336 . - . ID=gene-RM610_RS08280;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=RM610_RS08280;old_locus_tag=RM610_08310 NZ_JAVRJX010000003.1 Protein Homology CDS 63239 64336 . - 0 ID=cds-WP_037575402.1;Parent=gene-RM610_RS08280;Dbxref=GenBank:WP_037575402.1;Name=WP_037575402.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=RM610_RS08280;product=redox-regulated ATPase YchF;protein_id=WP_037575402.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 64343 64549 . - . ID=gene-RM610_RS08285;Name=RM610_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08285;old_locus_tag=RM610_08315 NZ_JAVRJX010000003.1 Protein Homology CDS 64343 64549 . - 0 ID=cds-WP_037575399.1;Parent=gene-RM610_RS08285;Dbxref=GenBank:WP_037575399.1;Name=WP_037575399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383300.1;locus_tag=RM610_RS08285;product=DUF951 domain-containing protein;protein_id=WP_037575399.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 64585 65475 . - . ID=gene-RM610_RS08290;Name=RM610_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08290;old_locus_tag=RM610_08320 NZ_JAVRJX010000003.1 Protein Homology CDS 64585 65475 . - 0 ID=cds-WP_107375414.1;Parent=gene-RM610_RS08290;Dbxref=GenBank:WP_107375414.1;Name=WP_107375414.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479237.1;locus_tag=RM610_RS08290;product=mechanosensitive ion channel family protein;protein_id=WP_107375414.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 65510 66337 . - . ID=gene-RM610_RS08295;Name=RM610_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08295;old_locus_tag=RM610_08325 NZ_JAVRJX010000003.1 Protein Homology CDS 65510 66337 . - 0 ID=cds-WP_311542117.1;Parent=gene-RM610_RS08295;Dbxref=GenBank:WP_311542117.1;Name=WP_311542117.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480309.1;locus_tag=RM610_RS08295;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_311542117.1;transl_table=11 NZ_JAVRJX010000003.1 cmsearch binding_site 66524 66821 . + . ID=id-NZ_JAVRJX010000003.1:66524..66821;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000003.1 RefSeq gene 66936 68039 . + . ID=gene-RM610_RS08300;Name=RM610_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08300;old_locus_tag=RM610_08330 NZ_JAVRJX010000003.1 Protein Homology CDS 66936 68039 . + 0 ID=cds-WP_107358757.1;Parent=gene-RM610_RS08300;Dbxref=GenBank:WP_107358757.1;Name=WP_107358757.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723610.1;locus_tag=RM610_RS08300;product=PLP-dependent transferase;protein_id=WP_107358757.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 68036 69211 . + . ID=gene-RM610_RS08305;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=RM610_RS08305;old_locus_tag=RM610_08335 NZ_JAVRJX010000003.1 Protein Homology CDS 68036 69211 . + 0 ID=cds-WP_107358756.1;Parent=gene-RM610_RS08305;Dbxref=GenBank:WP_107358756.1;Name=WP_107358756.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425702.1;locus_tag=RM610_RS08305;product=cystathionine beta-lyase MetC;protein_id=WP_107358756.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 69165 71006 . + . ID=gene-RM610_RS08310;Name=RM610_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08310;old_locus_tag=RM610_08340 NZ_JAVRJX010000003.1 Protein Homology CDS 69165 71006 . + 0 ID=cds-WP_107358755.1;Parent=gene-RM610_RS08310;Dbxref=GenBank:WP_107358755.1;Name=WP_107358755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=RM610_RS08310;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_107358755.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 71000 73264 . + . ID=gene-RM610_RS08315;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=RM610_RS08315;old_locus_tag=RM610_08345 NZ_JAVRJX010000003.1 Protein Homology CDS 71000 73264 . + 0 ID=cds-WP_311542180.1;Parent=gene-RM610_RS08315;Dbxref=GenBank:WP_311542180.1;Name=WP_311542180.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445124.1;locus_tag=RM610_RS08315;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_311542180.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 73395 73628 . + . ID=gene-RM610_RS08320;Name=RM610_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08320;old_locus_tag=RM610_08350 NZ_JAVRJX010000003.1 Protein Homology CDS 73395 73628 . + 0 ID=cds-WP_107358753.1;Parent=gene-RM610_RS08320;Dbxref=GenBank:WP_107358753.1;Name=WP_107358753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024461.8;locus_tag=RM610_RS08320;product=DUF3923 family protein;protein_id=WP_107358753.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 73673 74290 . + . ID=gene-RM610_RS08325;Name=RM610_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08325;old_locus_tag=RM610_08355 NZ_JAVRJX010000003.1 Protein Homology CDS 73673 74290 . + 0 ID=cds-WP_182472298.1;Parent=gene-RM610_RS08325;Dbxref=GenBank:WP_182472298.1;Name=WP_182472298.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615895.1;locus_tag=RM610_RS08325;product=LysE/ArgO family amino acid transporter;protein_id=WP_182472298.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 74393 75226 . - . ID=gene-RM610_RS08330;Name=RM610_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08330;old_locus_tag=RM610_08360 NZ_JAVRJX010000003.1 Protein Homology CDS 74393 75226 . - 0 ID=cds-WP_311542118.1;Parent=gene-RM610_RS08330;Dbxref=GenBank:WP_311542118.1;Name=WP_311542118.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=RM610_RS08330;product=urease accessory protein UreD;protein_id=WP_311542118.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 75228 75839 . - . ID=gene-RM610_RS08335;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=RM610_RS08335;old_locus_tag=RM610_08365 NZ_JAVRJX010000003.1 Protein Homology CDS 75228 75839 . - 0 ID=cds-WP_107358750.1;Parent=gene-RM610_RS08335;Dbxref=GenBank:WP_107358750.1;Name=WP_107358750.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166031.1;locus_tag=RM610_RS08335;product=urease accessory protein UreG;protein_id=WP_107358750.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 75851 76540 . - . ID=gene-RM610_RS08340;Name=RM610_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08340;old_locus_tag=RM610_08370 NZ_JAVRJX010000003.1 Protein Homology CDS 75851 76540 . - 0 ID=cds-WP_107358749.1;Parent=gene-RM610_RS08340;Dbxref=GenBank:WP_107358749.1;Name=WP_107358749.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=RM610_RS08340;product=urease accessory protein UreF;protein_id=WP_107358749.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 76533 76985 . - . ID=gene-RM610_RS08345;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=RM610_RS08345;old_locus_tag=RM610_08375 NZ_JAVRJX010000003.1 Protein Homology CDS 76533 76985 . - 0 ID=cds-WP_105963077.1;Parent=gene-RM610_RS08345;Dbxref=GenBank:WP_105963077.1;Name=WP_105963077.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=RM610_RS08345;product=urease accessory protein UreE;protein_id=WP_105963077.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 77166 78625 . - . ID=gene-RM610_RS08350;Name=RM610_RS08350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS08350;old_locus_tag=RM610_08380;pseudo=true NZ_JAVRJX010000003.1 Protein Homology CDS 77166 78625 . - 0 ID=cds-RM610_RS08350;Parent=gene-RM610_RS08350;Note=frameshifted;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999193.1;locus_tag=RM610_RS08350;product=carbon starvation CstA family protein;pseudo=true;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 79000 79515 . + . ID=gene-RM610_RS08355;Name=RM610_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08355;old_locus_tag=RM610_08385 NZ_JAVRJX010000003.1 Protein Homology CDS 79000 79515 . + 0 ID=cds-WP_107358748.1;Parent=gene-RM610_RS08355;Dbxref=GenBank:WP_107358748.1;Name=WP_107358748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479056.1;locus_tag=RM610_RS08355;product=YceI family protein;protein_id=WP_107358748.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 79652 80566 . + . ID=gene-RM610_RS08360;Name=RM610_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08360;old_locus_tag=RM610_08390 NZ_JAVRJX010000003.1 Protein Homology CDS 79652 80566 . + 0 ID=cds-WP_107380972.1;Parent=gene-RM610_RS08360;Dbxref=GenBank:WP_107380972.1;Name=WP_107380972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220252.1;locus_tag=RM610_RS08360;product=DUF5996 family protein;protein_id=WP_107380972.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 80892 82100 . - . ID=gene-RM610_RS08365;Name=RM610_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08365;old_locus_tag=RM610_08395 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 80892 82100 . - 0 ID=cds-WP_311542119.1;Parent=gene-RM610_RS08365;Dbxref=GenBank:WP_311542119.1;Name=WP_311542119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08365;product=hypothetical protein;protein_id=WP_311542119.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 82124 82402 . - . ID=gene-RM610_RS08370;Name=RM610_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08370;old_locus_tag=RM610_08400 NZ_JAVRJX010000003.1 Protein Homology CDS 82124 82402 . - 0 ID=cds-WP_107358746.1;Parent=gene-RM610_RS08370;Dbxref=GenBank:WP_107358746.1;Name=WP_107358746.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425884.1;locus_tag=RM610_RS08370;product=GNAT family N-acetyltransferase;protein_id=WP_107358746.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 82661 83194 . + . ID=gene-RM610_RS08375;Name=RM610_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08375;old_locus_tag=RM610_08405 NZ_JAVRJX010000003.1 Protein Homology CDS 82661 83194 . + 0 ID=cds-WP_107369329.1;Parent=gene-RM610_RS08375;Dbxref=GenBank:WP_107369329.1;Name=WP_107369329.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425888.1;locus_tag=RM610_RS08375;product=DoxX family protein;protein_id=WP_107369329.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 83237 84241 . - . ID=gene-RM610_RS08380;Name=RM610_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08380;old_locus_tag=RM610_08410 NZ_JAVRJX010000003.1 Protein Homology CDS 83237 84241 . - 0 ID=cds-WP_107369330.1;Parent=gene-RM610_RS08380;Dbxref=GenBank:WP_107369330.1;Name=WP_107369330.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461555.1;locus_tag=RM610_RS08380;product=M23 family metallopeptidase;protein_id=WP_107369330.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 84512 84940 . + . ID=gene-RM610_RS08385;Name=RM610_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08385;old_locus_tag=RM610_08415 NZ_JAVRJX010000003.1 Protein Homology CDS 84512 84940 . + 0 ID=cds-WP_037575350.1;Parent=gene-RM610_RS08385;Dbxref=GenBank:WP_037575350.1;Name=WP_037575350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478630.1;locus_tag=RM610_RS08385;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575350.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 85018 85977 . + . ID=gene-RM610_RS08390;Name=mhqE;gbkey=Gene;gene=mhqE;gene_biotype=protein_coding;locus_tag=RM610_RS08390;old_locus_tag=RM610_08420 NZ_JAVRJX010000003.1 Protein Homology CDS 85018 85977 . + 0 ID=cds-WP_107358743.1;Parent=gene-RM610_RS08390;Dbxref=GenBank:WP_107358743.1;Name=WP_107358743.1;gbkey=CDS;gene=mhqE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425714.1;locus_tag=RM610_RS08390;product=ring-cleaving dioxygenase MhqE;protein_id=WP_107358743.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 85997 86614 . + . ID=gene-RM610_RS08395;Name=RM610_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08395;old_locus_tag=RM610_08425 NZ_JAVRJX010000003.1 Protein Homology CDS 85997 86614 . + 0 ID=cds-WP_107358742.1;Parent=gene-RM610_RS08395;Dbxref=GenBank:WP_107358742.1;Name=WP_107358742.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=RM610_RS08395;product=flavin reductase family protein;protein_id=WP_107358742.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 86631 87218 . + . ID=gene-RM610_RS08400;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=RM610_RS08400;old_locus_tag=RM610_08430 NZ_JAVRJX010000003.1 Protein Homology CDS 86631 87218 . + 0 ID=cds-WP_107380969.1;Parent=gene-RM610_RS08400;Dbxref=GenBank:WP_107380969.1;Name=WP_107380969.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=RM610_RS08400;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_107380969.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 87332 88192 . - . ID=gene-RM610_RS08405;Name=RM610_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08405;old_locus_tag=RM610_08435 NZ_JAVRJX010000003.1 Protein Homology CDS 87332 88192 . - 0 ID=cds-WP_311542120.1;Parent=gene-RM610_RS08405;Dbxref=GenBank:WP_311542120.1;Name=WP_311542120.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742838.1;locus_tag=RM610_RS08405;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_311542120.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 88234 88953 . - . ID=gene-RM610_RS08410;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=RM610_RS08410;old_locus_tag=RM610_08440 NZ_JAVRJX010000003.1 Protein Homology CDS 88234 88953 . - 0 ID=cds-WP_037575335.1;Parent=gene-RM610_RS08410;Dbxref=GenBank:WP_037575335.1;Name=WP_037575335.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=RM610_RS08410;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_037575335.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 88954 90828 . - . ID=gene-RM610_RS08415;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=RM610_RS08415;old_locus_tag=RM610_08445 NZ_JAVRJX010000003.1 Protein Homology CDS 88954 90828 . - 0 ID=cds-WP_311542121.1;Parent=gene-RM610_RS08415;Dbxref=GenBank:WP_311542121.1;Name=WP_311542121.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=RM610_RS08415;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_311542121.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 90845 92227 . - . ID=gene-RM610_RS08420;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=RM610_RS08420;old_locus_tag=RM610_08450 NZ_JAVRJX010000003.1 Protein Homology CDS 90845 92227 . - 0 ID=cds-WP_105986399.1;Parent=gene-RM610_RS08420;Dbxref=GenBank:WP_105986399.1;Name=WP_105986399.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=RM610_RS08420;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_105986399.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 92413 92760 . - . ID=gene-RM610_RS08425;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=RM610_RS08425;old_locus_tag=RM610_08455 NZ_JAVRJX010000003.1 Protein Homology CDS 92413 92760 . - 0 ID=cds-WP_311542122.1;Parent=gene-RM610_RS08425;Dbxref=GenBank:WP_311542122.1;Name=WP_311542122.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=RM610_RS08425;product=ribonuclease P protein component;protein_id=WP_311542122.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 92983 93120 . - . ID=gene-RM610_RS08430;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=RM610_RS08430;old_locus_tag=RM610_08460 NZ_JAVRJX010000003.1 Protein Homology CDS 92983 93120 . - 0 ID=cds-WP_000240855.1;Parent=gene-RM610_RS08430;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=RM610_RS08430;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 93656 94996 . + . ID=gene-RM610_RS08435;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=RM610_RS08435;old_locus_tag=RM610_08465 NZ_JAVRJX010000003.1 Protein Homology CDS 93656 94996 . + 0 ID=cds-WP_107358738.1;Parent=gene-RM610_RS08435;Dbxref=GenBank:WP_107358738.1;Name=WP_107358738.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466368.1;locus_tag=RM610_RS08435;product=chromosomal replication initiator protein DnaA;protein_id=WP_107358738.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 95178 96311 . + . ID=gene-RM610_RS08440;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=RM610_RS08440;old_locus_tag=RM610_08470 NZ_JAVRJX010000003.1 Protein Homology CDS 95178 96311 . + 0 ID=cds-WP_311542123.1;Parent=gene-RM610_RS08440;Dbxref=GenBank:WP_311542123.1;Name=WP_311542123.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=RM610_RS08440;product=DNA polymerase III subunit beta;protein_id=WP_311542123.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 96448 97146 . + . ID=gene-RM610_RS08445;Name=RM610_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08445;old_locus_tag=RM610_08475 NZ_JAVRJX010000003.1 Protein Homology CDS 96448 97146 . + 0 ID=cds-WP_311542124.1;Parent=gene-RM610_RS08445;Dbxref=GenBank:WP_311542124.1;Name=WP_311542124.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: protein motif:HMM:NF024853.7;locus_tag=RM610_RS08445;product=DsbA family protein;protein_id=WP_311542124.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 97291 97512 . + . ID=gene-RM610_RS08450;Name=RM610_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08450;old_locus_tag=RM610_08480 NZ_JAVRJX010000003.1 Protein Homology CDS 97291 97512 . + 0 ID=cds-WP_037565318.1;Parent=gene-RM610_RS08450;Dbxref=GenBank:WP_037565318.1;Name=WP_037565318.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612664.1;locus_tag=RM610_RS08450;product=RNA-binding S4 domain-containing protein;protein_id=WP_037565318.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 97509 98624 . + . ID=gene-RM610_RS08455;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=RM610_RS08455;old_locus_tag=RM610_08485 NZ_JAVRJX010000003.1 Protein Homology CDS 97509 98624 . + 0 ID=cds-WP_311542125.1;Parent=gene-RM610_RS08455;Dbxref=GenBank:WP_311542125.1;Name=WP_311542125.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=RM610_RS08455;product=DNA replication/repair protein RecF;protein_id=WP_311542125.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 98637 100568 . + . ID=gene-RM610_RS08460;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=RM610_RS08460;old_locus_tag=RM610_08490 NZ_JAVRJX010000003.1 Protein Homology CDS 98637 100568 . + 0 ID=cds-WP_375712208.1;Parent=gene-RM610_RS08460;Dbxref=GenBank:WP_375712208.1;Name=WP_375712208.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=RM610_RS08460;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_375712208.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 100601 103264 . + . ID=gene-RM610_RS08465;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=RM610_RS08465;old_locus_tag=RM610_08495 NZ_JAVRJX010000003.1 Protein Homology CDS 100601 103264 . + 0 ID=cds-WP_311542126.1;Parent=gene-RM610_RS08465;Dbxref=GenBank:WP_311542126.1;Name=WP_311542126.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468941.1;locus_tag=RM610_RS08465;product=DNA gyrase subunit A;protein_id=WP_311542126.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 103312 104124 . - . ID=gene-RM610_RS08470;Name=RM610_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08470;old_locus_tag=RM610_08500 NZ_JAVRJX010000003.1 Protein Homology CDS 103312 104124 . - 0 ID=cds-WP_103159125.1;Parent=gene-RM610_RS08470;Dbxref=GenBank:WP_103159125.1;Name=WP_103159125.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510617.1;locus_tag=RM610_RS08470;product=NAD(P)H-hydrate dehydratase;protein_id=WP_103159125.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 104400 105902 . + . ID=gene-RM610_RS08475;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=RM610_RS08475;old_locus_tag=RM610_08505 NZ_JAVRJX010000003.1 Protein Homology CDS 104400 105902 . + 0 ID=cds-WP_107358732.1;Parent=gene-RM610_RS08475;Dbxref=GenBank:WP_107358732.1;Name=WP_107358732.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454363.1;locus_tag=RM610_RS08475;product=histidine ammonia-lyase;protein_id=WP_107358732.1;transl_table=11 NZ_JAVRJX010000003.1 cmsearch binding_site 105968 106152 . + . ID=id-NZ_JAVRJX010000003.1:105968..106152;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJX010000003.1 RefSeq gene 106206 107486 . + . ID=gene-RM610_RS08480;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=RM610_RS08480;old_locus_tag=RM610_08510 NZ_JAVRJX010000003.1 Protein Homology CDS 106206 107486 . + 0 ID=cds-WP_107369341.1;Parent=gene-RM610_RS08480;Dbxref=GenBank:WP_107369341.1;Name=WP_107369341.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=RM610_RS08480;product=serine--tRNA ligase;protein_id=WP_107369341.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 107747 108037 . + . ID=gene-RM610_RS08485;Name=RM610_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08485;old_locus_tag=RM610_08515 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 107747 108037 . + 0 ID=cds-WP_311542127.1;Parent=gene-RM610_RS08485;Dbxref=GenBank:WP_311542127.1;Name=WP_311542127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08485;product=hypothetical protein;protein_id=WP_311542127.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 108280 108660 . + . ID=gene-RM610_RS08490;Name=gvpU;gbkey=Gene;gene=gvpU;gene_biotype=protein_coding;locus_tag=RM610_RS08490;old_locus_tag=RM610_08520 NZ_JAVRJX010000003.1 Protein Homology CDS 108280 108660 . + 0 ID=cds-WP_105987171.1;Parent=gene-RM610_RS08490;Dbxref=GenBank:WP_105987171.1;Name=WP_105987171.1;Ontology_term=GO:0031412,GO:0031411;gbkey=CDS;gene=gvpU;go_component=gas vesicle|0031411||IEA;go_process=gas vesicle organization|0031412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481461.1;locus_tag=RM610_RS08490;product=gas vesicle accessory protein GvpU;protein_id=WP_105987171.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 108951 109643 . + . ID=gene-RM610_RS08495;Name=RM610_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08495;old_locus_tag=RM610_08525 NZ_JAVRJX010000003.1 Protein Homology CDS 108951 109643 . + 0 ID=cds-WP_311542130.1;Parent=gene-RM610_RS08495;Dbxref=GenBank:WP_311542130.1;Name=WP_311542130.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499825.1;locus_tag=RM610_RS08495;product=AzlC family ABC transporter permease;protein_id=WP_311542130.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 109640 109966 . + . ID=gene-RM610_RS08500;Name=RM610_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08500;old_locus_tag=RM610_08530 NZ_JAVRJX010000003.1 Protein Homology CDS 109640 109966 . + 0 ID=cds-WP_311542131.1;Parent=gene-RM610_RS08500;Dbxref=GenBank:WP_311542131.1;Name=WP_311542131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930925.1;locus_tag=RM610_RS08500;product=branched-chain amino acid transport AzlD family protein;protein_id=WP_311542131.1;transl_table=11 NZ_JAVRJX010000003.1 cmsearch riboswitch 110023 110124 . + . ID=id-NZ_JAVRJX010000003.1:110023..110124;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000003.1 RefSeq gene 110201 111166 . + . ID=gene-RM610_RS08505;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=RM610_RS08505;old_locus_tag=RM610_08535 NZ_JAVRJX010000003.1 Protein Homology CDS 110201 111166 . + 0 ID=cds-WP_311542132.1;Parent=gene-RM610_RS08505;Dbxref=GenBank:WP_311542132.1;Name=WP_311542132.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468581.1;locus_tag=RM610_RS08505;product=homoserine O-acetyltransferase MetX;protein_id=WP_311542132.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 111500 112405 . + . ID=gene-RM610_RS08510;Name=RM610_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08510;old_locus_tag=RM610_08540 NZ_JAVRJX010000003.1 Protein Homology CDS 111500 112405 . + 0 ID=cds-WP_375712210.1;Parent=gene-RM610_RS08510;Dbxref=GenBank:WP_375712210.1;Name=WP_375712210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=RM610_RS08510;product=DUF2232 domain-containing protein;protein_id=WP_375712210.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 112417 114384 . + . ID=gene-RM610_RS08515;Name=RM610_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08515;old_locus_tag=RM610_08545 NZ_JAVRJX010000003.1 Protein Homology CDS 112417 114384 . + 0 ID=cds-WP_107358723.1;Parent=gene-RM610_RS08515;Dbxref=GenBank:WP_107358723.1;Name=WP_107358723.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=RM610_RS08515;product=DHH family phosphoesterase;protein_id=WP_107358723.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 114381 114827 . + . ID=gene-RM610_RS08520;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=RM610_RS08520;old_locus_tag=RM610_08550 NZ_JAVRJX010000003.1 Protein Homology CDS 114381 114827 . + 0 ID=cds-WP_107358722.1;Parent=gene-RM610_RS08520;Dbxref=GenBank:WP_107358722.1;Name=WP_107358722.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=RM610_RS08520;product=50S ribosomal protein L9;protein_id=WP_107358722.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 114973 116373 . + . ID=gene-RM610_RS08525;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM610_RS08525;old_locus_tag=RM610_08555 NZ_JAVRJX010000003.1 Protein Homology CDS 114973 116373 . + 0 ID=cds-WP_103159118.1;Parent=gene-RM610_RS08525;Dbxref=GenBank:WP_103159118.1;Name=WP_103159118.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=RM610_RS08525;product=replicative DNA helicase;protein_id=WP_103159118.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 116665 117951 . + . ID=gene-RM610_RS08530;Name=RM610_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08530;old_locus_tag=RM610_08560 NZ_JAVRJX010000003.1 Protein Homology CDS 116665 117951 . + 0 ID=cds-WP_107358721.1;Parent=gene-RM610_RS08530;Dbxref=GenBank:WP_107358721.1;Name=WP_107358721.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=RM610_RS08530;product=adenylosuccinate synthase;protein_id=WP_107358721.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 118038 118253 . - . ID=gene-RM610_RS08535;Name=RM610_RS08535;end_range=118253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS08535;old_locus_tag=RM610_08565;partial=true;pseudo=true NZ_JAVRJX010000003.1 Protein Homology CDS 118038 118253 . - 0 ID=cds-RM610_RS08535;Parent=gene-RM610_RS08535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=118253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425747.1;locus_tag=RM610_RS08535;partial=true;product=YrhK family protein;pseudo=true;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 118601 118675 . + . ID=gene-RM610_RS08540;Name=RM610_RS08540;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS08540;old_locus_tag=RM610_08570 NZ_JAVRJX010000003.1 tRNAscan-SE tRNA 118601 118675 . + . ID=rna-RM610_RS08540;Parent=gene-RM610_RS08540;anticodon=(pos:118634..118636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS08540;product=tRNA-Glu NZ_JAVRJX010000003.1 tRNAscan-SE exon 118601 118675 . + . ID=exon-RM610_RS08540-1;Parent=rna-RM610_RS08540;anticodon=(pos:118634..118636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS08540;product=tRNA-Glu NZ_JAVRJX010000003.1 RefSeq gene 118682 118755 . + . ID=gene-RM610_RS08545;Name=RM610_RS08545;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS08545;old_locus_tag=RM610_08575 NZ_JAVRJX010000003.1 tRNAscan-SE tRNA 118682 118755 . + . ID=rna-RM610_RS08545;Parent=gene-RM610_RS08545;anticodon=(pos:118716..118718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS08545;product=tRNA-Asp NZ_JAVRJX010000003.1 tRNAscan-SE exon 118682 118755 . + . ID=exon-RM610_RS08545-1;Parent=rna-RM610_RS08545;anticodon=(pos:118716..118718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS08545;product=tRNA-Asp NZ_JAVRJX010000003.1 RefSeq gene 119001 119702 . + . ID=gene-RM610_RS08550;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=RM610_RS08550;old_locus_tag=RM610_08580 NZ_JAVRJX010000003.1 Protein Homology CDS 119001 119702 . + 0 ID=cds-WP_037575295.1;Parent=gene-RM610_RS08550;Dbxref=GenBank:WP_037575295.1;Name=WP_037575295.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=RM610_RS08550;product=response regulator YycF;protein_id=WP_037575295.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 119718 121550 . + . ID=gene-RM610_RS08555;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=RM610_RS08555;old_locus_tag=RM610_08585 NZ_JAVRJX010000003.1 Protein Homology CDS 119718 121550 . + 0 ID=cds-WP_107369347.1;Parent=gene-RM610_RS08555;Dbxref=GenBank:WP_107369347.1;Name=WP_107369347.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274376.1;locus_tag=RM610_RS08555;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_107369347.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 121540 122877 . + . ID=gene-RM610_RS08560;Name=RM610_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08560;old_locus_tag=RM610_08590 NZ_JAVRJX010000003.1 Protein Homology CDS 121540 122877 . + 0 ID=cds-WP_311542133.1;Parent=gene-RM610_RS08560;Dbxref=GenBank:WP_311542133.1;Name=WP_311542133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=RM610_RS08560;product=YycH family regulatory protein;protein_id=WP_311542133.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 122874 123650 . + . ID=gene-RM610_RS08565;Name=RM610_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08565;old_locus_tag=RM610_08595 NZ_JAVRJX010000003.1 Protein Homology CDS 122874 123650 . + 0 ID=cds-WP_107358717.1;Parent=gene-RM610_RS08565;Dbxref=GenBank:WP_107358717.1;Name=WP_107358717.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=RM610_RS08565;product=two-component system regulatory protein YycI;protein_id=WP_107358717.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 123676 124458 . + . ID=gene-RM610_RS08570;Name=RM610_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08570;old_locus_tag=RM610_08600 NZ_JAVRJX010000003.1 Protein Homology CDS 123676 124458 . + 0 ID=cds-WP_107380958.1;Parent=gene-RM610_RS08570;Dbxref=GenBank:WP_107380958.1;Name=WP_107380958.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=RM610_RS08570;product=MBL fold metallo-hydrolase;protein_id=WP_107380958.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 124571 124891 . + . ID=gene-RM610_RS08575;Name=RM610_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08575;old_locus_tag=RM610_08605 NZ_JAVRJX010000003.1 Protein Homology CDS 124571 124891 . + 0 ID=cds-WP_311542134.1;Parent=gene-RM610_RS08575;Dbxref=GenBank:WP_311542134.1;Name=WP_311542134.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012657389.1;locus_tag=RM610_RS08575;product=ArsR/SmtB family transcription factor;protein_id=WP_311542134.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 124888 126177 . + . ID=gene-RM610_RS08580;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=RM610_RS08580;old_locus_tag=RM610_08610 NZ_JAVRJX010000003.1 Protein Homology CDS 124888 126177 . + 0 ID=cds-WP_311542135.1;Parent=gene-RM610_RS08580;Dbxref=GenBank:WP_311542135.1;Name=WP_311542135.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=RM610_RS08580;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_311542135.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 126195 126593 . + . ID=gene-RM610_RS08585;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=RM610_RS08585;old_locus_tag=RM610_08615 NZ_JAVRJX010000003.1 Protein Homology CDS 126195 126593 . + 0 ID=cds-WP_107358713.1;Parent=gene-RM610_RS08585;Dbxref=GenBank:WP_107358713.1;Name=WP_107358713.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM610_RS08585;product=arsenate reductase (thioredoxin);protein_id=WP_107358713.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 126992 127471 . + . ID=gene-RM610_RS08590;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=RM610_RS08590;old_locus_tag=RM610_08620 NZ_JAVRJX010000003.1 Protein Homology CDS 126992 127471 . + 0 ID=cds-WP_107376167.1;Parent=gene-RM610_RS08590;Dbxref=GenBank:WP_107376167.1;Name=WP_107376167.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498633.1;locus_tag=RM610_RS08590;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_107376167.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 127982 130045 . + . ID=gene-RM610_RS08595;Name=RM610_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08595;old_locus_tag=RM610_08625 NZ_JAVRJX010000003.1 Protein Homology CDS 127982 130045 . + 0 ID=cds-WP_031796653.1;Parent=gene-RM610_RS08595;Dbxref=GenBank:WP_031796653.1;Name=WP_031796653.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=RM610_RS08595;product=heavy metal translocating P-type ATPase;protein_id=WP_031796653.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 130063 130608 . + . ID=gene-RM610_RS08600;Name=RM610_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08600;old_locus_tag=RM610_08630 NZ_JAVRJX010000003.1 Protein Homology CDS 130063 130608 . + 0 ID=cds-WP_000592150.1;Parent=gene-RM610_RS08600;Dbxref=GenBank:WP_000592150.1;Name=WP_000592150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592150.1;locus_tag=RM610_RS08600;product=YdhK family protein;protein_id=WP_000592150.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 130814 131209 . - . ID=gene-RM610_RS08605;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=RM610_RS08605;old_locus_tag=RM610_08635 NZ_JAVRJX010000003.1 Protein Homology CDS 130814 131209 . - 0 ID=cds-WP_011274439.1;Parent=gene-RM610_RS08605;Dbxref=GenBank:WP_011274439.1;Name=WP_011274439.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM610_RS08605;product=arsenate reductase (thioredoxin);protein_id=WP_011274439.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 131228 132520 . - . ID=gene-RM610_RS08610;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=RM610_RS08610;old_locus_tag=RM610_08640 NZ_JAVRJX010000003.1 Protein Homology CDS 131228 132520 . - 0 ID=cds-WP_011274440.1;Parent=gene-RM610_RS08610;Dbxref=GenBank:WP_011274440.1;Name=WP_011274440.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500394.1;locus_tag=RM610_RS08610;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_011274440.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 132520 132834 . - . ID=gene-RM610_RS08615;Name=RM610_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08615;old_locus_tag=RM610_08645 NZ_JAVRJX010000003.1 Protein Homology CDS 132520 132834 . - 0 ID=cds-WP_002441914.1;Parent=gene-RM610_RS08615;Dbxref=GenBank:WP_002441914.1;Name=WP_002441914.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509693.1;locus_tag=RM610_RS08615;product=ArsR/SmtB family transcription factor;protein_id=WP_002441914.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 132831 134495 . - . ID=gene-RM610_RS08620;Name=RM610_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08620;old_locus_tag=RM610_08650 NZ_JAVRJX010000003.1 Protein Homology CDS 132831 134495 . - 0 ID=cds-WP_311542136.1;Parent=gene-RM610_RS08620;Dbxref=GenBank:WP_311542136.1;Name=WP_311542136.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488499.1;locus_tag=RM610_RS08620;product=FAD-dependent oxidoreductase;protein_id=WP_311542136.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 134495 136222 . - . ID=gene-RM610_RS08625;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=RM610_RS08625;old_locus_tag=RM610_08655 NZ_JAVRJX010000003.1 Protein Homology CDS 134495 136222 . - 0 ID=cds-WP_311542137.1;Parent=gene-RM610_RS08625;Dbxref=GenBank:WP_311542137.1;Name=WP_311542137.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113803.1;locus_tag=RM610_RS08625;product=arsenical pump-driving ATPase;protein_id=WP_311542137.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 136203 136550 . - . ID=gene-RM610_RS08630;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=RM610_RS08630;old_locus_tag=RM610_08660 NZ_JAVRJX010000003.1 Protein Homology CDS 136203 136550 . - 0 ID=cds-WP_116094240.1;Parent=gene-RM610_RS08630;Dbxref=GenBank:WP_116094240.1;Name=WP_116094240.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474929.1;locus_tag=RM610_RS08630;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_116094240.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 136835 137029 . + . ID=gene-RM610_RS08635;Name=RM610_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08635;old_locus_tag=RM610_08665 NZ_JAVRJX010000003.1 Protein Homology CDS 136835 137029 . + 0 ID=cds-WP_002509689.1;Parent=gene-RM610_RS08635;Dbxref=GenBank:WP_002509689.1;Name=WP_002509689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454594.1;locus_tag=RM610_RS08635;product=hypothetical protein;protein_id=WP_002509689.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 137079 137399 . + . ID=gene-RM610_RS08640;Name=RM610_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08640;old_locus_tag=RM610_08670 NZ_JAVRJX010000003.1 Protein Homology CDS 137079 137399 . + 0 ID=cds-WP_069821051.1;Parent=gene-RM610_RS08640;Dbxref=GenBank:WP_069821051.1;Name=WP_069821051.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449352.1;locus_tag=RM610_RS08640;product=ArsR/SmtB family transcription factor;protein_id=WP_069821051.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 137486 138370 . + . ID=gene-RM610_RS08645;Name=RM610_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08645;old_locus_tag=RM610_08675 NZ_JAVRJX010000003.1 Protein Homology CDS 137486 138370 . + 0 ID=cds-WP_116094242.1;Parent=gene-RM610_RS08645;Dbxref=GenBank:WP_116094242.1;Name=WP_116094242.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175597.1;locus_tag=RM610_RS08645;product=permease;protein_id=WP_116094242.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 138384 138512 . + . ID=gene-RM610_RS08650;Name=RM610_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08650;old_locus_tag=RM610_08680 NZ_JAVRJX010000003.1 Protein Homology CDS 138384 138512 . + 0 ID=cds-WP_002488994.1;Parent=gene-RM610_RS08650;Dbxref=GenBank:WP_002488994.1;Name=WP_002488994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830463.1;locus_tag=RM610_RS08650;product=hypothetical protein;protein_id=WP_002488994.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 138893 139084 . + . ID=gene-RM610_RS08655;Name=RM610_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08655;old_locus_tag=RM610_08685 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 138893 139084 . + 0 ID=cds-WP_107376168.1;Parent=gene-RM610_RS08655;Dbxref=GenBank:WP_107376168.1;Name=WP_107376168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08655;product=hypothetical protein;protein_id=WP_107376168.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 139443 139658 . - . ID=gene-RM610_RS08660;Name=RM610_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08660;old_locus_tag=RM610_08690 NZ_JAVRJX010000003.1 Protein Homology CDS 139443 139658 . - 0 ID=cds-WP_037576421.1;Parent=gene-RM610_RS08660;Dbxref=GenBank:WP_037576421.1;Name=WP_037576421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480131.1;locus_tag=RM610_RS08660;product=hypothetical protein;protein_id=WP_037576421.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 139961 140101 . - . ID=gene-RM610_RS08665;Name=RM610_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08665;old_locus_tag=RM610_08695 NZ_JAVRJX010000003.1 Protein Homology CDS 139961 140101 . - 0 ID=cds-WP_165806043.1;Parent=gene-RM610_RS08665;Dbxref=GenBank:WP_165806043.1;Name=WP_165806043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480129.1;locus_tag=RM610_RS08665;product=hypothetical protein;protein_id=WP_165806043.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 140295 141374 . + . ID=gene-RM610_RS08670;Name=RM610_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08670;old_locus_tag=RM610_08700 NZ_JAVRJX010000003.1 Protein Homology CDS 140295 141374 . + 0 ID=cds-WP_311542138.1;Parent=gene-RM610_RS08670;Dbxref=GenBank:WP_311542138.1;Name=WP_311542138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722996.1;locus_tag=RM610_RS08670;product=aldo/keto reductase;protein_id=WP_311542138.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 141524 142501 . - . ID=gene-RM610_RS08675;Name=RM610_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08675;old_locus_tag=RM610_08705 NZ_JAVRJX010000003.1 Protein Homology CDS 141524 142501 . - 0 ID=cds-WP_037576416.1;Parent=gene-RM610_RS08675;Dbxref=GenBank:WP_037576416.1;Name=WP_037576416.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447550.1;locus_tag=RM610_RS08675;product=tRNA dihydrouridine synthase;protein_id=WP_037576416.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 142720 143415 . + . ID=gene-RM610_RS08680;Name=RM610_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08680;old_locus_tag=RM610_08710 NZ_JAVRJX010000003.1 Protein Homology CDS 142720 143415 . + 0 ID=cds-WP_037576413.1;Parent=gene-RM610_RS08680;Dbxref=GenBank:WP_037576413.1;Name=WP_037576413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468807.1;locus_tag=RM610_RS08680;product=DUF969 domain-containing protein;protein_id=WP_037576413.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 143408 144334 . + . ID=gene-RM610_RS08685;Name=RM610_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08685;old_locus_tag=RM610_08715 NZ_JAVRJX010000003.1 Protein Homology CDS 143408 144334 . + 0 ID=cds-WP_105963050.1;Parent=gene-RM610_RS08685;Dbxref=GenBank:WP_105963050.1;Name=WP_105963050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302429.1;locus_tag=RM610_RS08685;product=DUF979 domain-containing protein;protein_id=WP_105963050.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 144350 144991 . + . ID=gene-RM610_RS08690;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=RM610_RS08690;old_locus_tag=RM610_08720 NZ_JAVRJX010000003.1 Protein Homology CDS 144350 144991 . + 0 ID=cds-WP_037576410.1;Parent=gene-RM610_RS08690;Dbxref=GenBank:WP_037576410.1;Name=WP_037576410.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=RM610_RS08690;product=pyroglutamyl-peptidase I;protein_id=WP_037576410.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 145571 145729 . + . ID=gene-RM610_RS12070;Name=RM610_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12070;old_locus_tag=RM610_08725 NZ_JAVRJX010000003.1 Protein Homology CDS 145571 145729 . + 0 ID=cds-WP_375712213.1;Parent=gene-RM610_RS12070;Dbxref=GenBank:WP_375712213.1;Name=WP_375712213.1;Ontology_term=GO:0042742,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: protein motif:HMM:NF016486.7;locus_tag=RM610_RS12070;product=type A2 lanthipeptide;protein_id=WP_375712213.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 146498 147211 . + . ID=gene-RM610_RS08695;Name=RM610_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08695;old_locus_tag=RM610_08730 NZ_JAVRJX010000003.1 Protein Homology CDS 146498 147211 . + 0 ID=cds-WP_311542139.1;Parent=gene-RM610_RS08695;Dbxref=GenBank:WP_311542139.1;Name=WP_311542139.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460941.1;locus_tag=RM610_RS08695;product=GntR family transcriptional regulator;protein_id=WP_311542139.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 147239 148357 . + . ID=gene-RM610_RS08700;Name=RM610_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08700;old_locus_tag=RM610_08735 NZ_JAVRJX010000003.1 Protein Homology CDS 147239 148357 . + 0 ID=cds-WP_311542140.1;Parent=gene-RM610_RS08700;Dbxref=GenBank:WP_311542140.1;Name=WP_311542140.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460940.1;locus_tag=RM610_RS08700;product=SIS domain-containing protein;protein_id=WP_311542140.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 148451 149395 . + . ID=gene-RM610_RS08705;Name=RM610_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08705;old_locus_tag=RM610_08740 NZ_JAVRJX010000003.1 Protein Homology CDS 148451 149395 . + 0 ID=cds-WP_311542141.1;Parent=gene-RM610_RS08705;Dbxref=GenBank:WP_311542141.1;Name=WP_311542141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017001107.1;locus_tag=RM610_RS08705;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_311542141.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 149412 151178 . + . ID=gene-RM610_RS08710;Name=RM610_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08710;old_locus_tag=RM610_08745 NZ_JAVRJX010000003.1 Protein Homology CDS 149412 151178 . + 0 ID=cds-WP_107381573.1;Parent=gene-RM610_RS08710;Dbxref=GenBank:WP_107381573.1;Name=WP_107381573.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425911.1;locus_tag=RM610_RS08710;product=glycoside hydrolase family 35 protein;protein_id=WP_107381573.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 151196 151675 . + . ID=gene-RM610_RS08715;Name=RM610_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08715;old_locus_tag=RM610_08750 NZ_JAVRJX010000003.1 Protein Homology CDS 151196 151675 . + 0 ID=cds-WP_037576396.1;Parent=gene-RM610_RS08715;Dbxref=GenBank:WP_037576396.1;Name=WP_037576396.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=RM610_RS08715;product=PTS sugar transporter subunit IIB;protein_id=WP_037576396.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 151692 152600 . + . ID=gene-RM610_RS08720;Name=RM610_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08720;old_locus_tag=RM610_08755 NZ_JAVRJX010000003.1 Protein Homology CDS 151692 152600 . + 0 ID=cds-WP_107376131.1;Parent=gene-RM610_RS08720;Dbxref=GenBank:WP_107376131.1;Name=WP_107376131.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=RM610_RS08720;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_107376131.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 152587 153486 . + . ID=gene-RM610_RS08725;Name=RM610_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08725;old_locus_tag=RM610_08760 NZ_JAVRJX010000003.1 Protein Homology CDS 152587 153486 . + 0 ID=cds-WP_107359720.1;Parent=gene-RM610_RS08725;Dbxref=GenBank:WP_107359720.1;Name=WP_107359720.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=RM610_RS08725;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_107359720.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 153502 153897 . + . ID=gene-RM610_RS08730;Name=RM610_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08730;old_locus_tag=RM610_08765 NZ_JAVRJX010000003.1 Protein Homology CDS 153502 153897 . + 0 ID=cds-WP_311542142.1;Parent=gene-RM610_RS08730;Dbxref=GenBank:WP_311542142.1;Name=WP_311542142.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479145.1;locus_tag=RM610_RS08730;product=PTS sugar transporter subunit IIA;protein_id=WP_311542142.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 153927 155078 . + . ID=gene-RM610_RS08735;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM610_RS08735;old_locus_tag=RM610_08770 NZ_JAVRJX010000003.1 Protein Homology CDS 153927 155078 . + 0 ID=cds-WP_107364366.1;Parent=gene-RM610_RS08735;Dbxref=GenBank:WP_107364366.1;Name=WP_107364366.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471824.1;locus_tag=RM610_RS08735;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_107364366.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 155588 156544 . - . ID=gene-RM610_RS08740;Name=RM610_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08740;old_locus_tag=RM610_08775 NZ_JAVRJX010000003.1 Protein Homology CDS 155588 156544 . - 0 ID=cds-WP_311542143.1;Parent=gene-RM610_RS08740;Dbxref=GenBank:WP_311542143.1;Name=WP_311542143.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166779.1;locus_tag=RM610_RS08740;product=alpha/beta hydrolase;protein_id=WP_311542143.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 156561 157361 . - . ID=gene-RM610_RS08745;Name=RM610_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08745;old_locus_tag=RM610_08780 NZ_JAVRJX010000003.1 Protein Homology CDS 156561 157361 . - 0 ID=cds-WP_107369914.1;Parent=gene-RM610_RS08745;Dbxref=GenBank:WP_107369914.1;Name=WP_107369914.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166778.1;locus_tag=RM610_RS08745;product=arylamine N-acetyltransferase family protein;protein_id=WP_107369914.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 158198 158613 . + . ID=gene-RM610_RS08750;Name=RM610_RS08750;end_range=158613,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS08750;old_locus_tag=RM610_08785;partial=true;pseudo=true NZ_JAVRJX010000003.1 Protein Homology CDS 158198 158613 . + 0 ID=cds-RM610_RS08750;Parent=gene-RM610_RS08750;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=158613,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246801.1;locus_tag=RM610_RS08750;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 158799 159170 . + . ID=gene-RM610_RS08755;Name=RM610_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08755;old_locus_tag=RM610_08790 NZ_JAVRJX010000003.1 Protein Homology CDS 158799 159170 . + 0 ID=cds-WP_107364368.1;Parent=gene-RM610_RS08755;Dbxref=GenBank:WP_107364368.1;Name=WP_107364368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638058.1;locus_tag=RM610_RS08755;product=hypothetical protein;protein_id=WP_107364368.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 159808 160731 . + . ID=gene-RM610_RS08760;Name=RM610_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08760;old_locus_tag=RM610_08795 NZ_JAVRJX010000003.1 Protein Homology CDS 159808 160731 . + 0 ID=cds-WP_107376308.1;Parent=gene-RM610_RS08760;Dbxref=GenBank:WP_107376308.1;Name=WP_107376308.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302238.1;locus_tag=RM610_RS08760;product=lactate/malate family dehydrogenase;protein_id=WP_107376308.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 160987 162849 . + . ID=gene-RM610_RS08765;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=RM610_RS08765;old_locus_tag=RM610_08800 NZ_JAVRJX010000003.1 Protein Homology CDS 160987 162849 . + 0 ID=cds-WP_311542144.1;Parent=gene-RM610_RS08765;Dbxref=GenBank:WP_311542144.1;Name=WP_311542144.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486864.1;locus_tag=RM610_RS08765;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_311542144.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 162836 163369 . + . ID=gene-RM610_RS08770;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=RM610_RS08770;old_locus_tag=RM610_08805 NZ_JAVRJX010000003.1 Protein Homology CDS 162836 163369 . + 0 ID=cds-WP_107359728.1;Parent=gene-RM610_RS08770;Dbxref=GenBank:WP_107359728.1;Name=WP_107359728.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460588.1;locus_tag=RM610_RS08770;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_107359728.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 163572 164954 . + . ID=gene-RM610_RS08775;Name=RM610_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08775;old_locus_tag=RM610_08810 NZ_JAVRJX010000003.1 Protein Homology CDS 163572 164954 . + 0 ID=cds-WP_311542182.1;Parent=gene-RM610_RS08775;Dbxref=GenBank:WP_311542182.1;Name=WP_311542182.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467307.1;locus_tag=RM610_RS08775;product=MDR family MFS transporter;protein_id=WP_311542182.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 165034 165993 . + . ID=gene-RM610_RS08780;Name=RM610_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08780;old_locus_tag=RM610_08815 NZ_JAVRJX010000003.1 Protein Homology CDS 165034 165993 . + 0 ID=cds-WP_311542145.1;Parent=gene-RM610_RS08780;Dbxref=GenBank:WP_311542145.1;Name=WP_311542145.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467336.1;locus_tag=RM610_RS08780;product=amidohydrolase family protein;protein_id=WP_311542145.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 166127 167653 . - . ID=gene-RM610_RS08785;Name=RM610_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08785;old_locus_tag=RM610_08820 NZ_JAVRJX010000003.1 Protein Homology CDS 166127 167653 . - 0 ID=cds-WP_311542146.1;Parent=gene-RM610_RS08785;Dbxref=GenBank:WP_311542146.1;Name=WP_311542146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208888.1;locus_tag=RM610_RS08785;product=hypothetical protein;protein_id=WP_311542146.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 167673 168374 . - . ID=gene-RM610_RS08790;Name=RM610_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08790;old_locus_tag=RM610_08825 NZ_JAVRJX010000003.1 Protein Homology CDS 167673 168374 . - 0 ID=cds-WP_107369920.1;Parent=gene-RM610_RS08790;Dbxref=GenBank:WP_107369920.1;Name=WP_107369920.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769156.1;locus_tag=RM610_RS08790;product=exotoxin beta-grasp domain-containing protein;protein_id=WP_107369920.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 168741 170489 . + . ID=gene-RM610_RS08795;Name=RM610_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08795;old_locus_tag=RM610_08830 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 168741 170489 . + 0 ID=cds-WP_311542147.1;Parent=gene-RM610_RS08795;Dbxref=GenBank:WP_311542147.1;Name=WP_311542147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08795;product=hypothetical protein;protein_id=WP_311542147.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 170542 172608 . - . ID=gene-RM610_RS08800;Name=RM610_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08800;old_locus_tag=RM610_08835 NZ_JAVRJX010000003.1 Protein Homology CDS 170542 172608 . - 0 ID=cds-WP_311542148.1;Parent=gene-RM610_RS08800;Dbxref=GenBank:WP_311542148.1;Name=WP_311542148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011304033.1;locus_tag=RM610_RS08800;product=amidase domain-containing protein;protein_id=WP_311542148.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 173249 176077 . + . ID=gene-RM610_RS08805;Name=RM610_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08805;old_locus_tag=RM610_08840 NZ_JAVRJX010000003.1 Protein Homology CDS 173249 176077 . + 0 ID=cds-WP_311542149.1;Parent=gene-RM610_RS08805;Dbxref=GenBank:WP_311542149.1;Name=WP_311542149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=RM610_RS08805;product=YhgE/Pip family protein;protein_id=WP_311542149.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 176144 176728 . - . ID=gene-RM610_RS08810;Name=RM610_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08810;old_locus_tag=RM610_08845 NZ_JAVRJX010000003.1 Protein Homology CDS 176144 176728 . - 0 ID=cds-WP_107358185.1;Parent=gene-RM610_RS08810;Dbxref=GenBank:WP_107358185.1;Name=WP_107358185.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025636.7;locus_tag=RM610_RS08810;product=TetR/AcrR family transcriptional regulator;protein_id=WP_107358185.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 176893 178668 . + . ID=gene-RM610_RS08815;Name=RM610_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08815;old_locus_tag=RM610_08850 NZ_JAVRJX010000003.1 Protein Homology CDS 176893 178668 . + 0 ID=cds-WP_311542150.1;Parent=gene-RM610_RS08815;Dbxref=GenBank:WP_311542150.1;Name=WP_311542150.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=RM610_RS08815;product=oleate hydratase;protein_id=WP_311542150.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 178770 180377 . - . ID=gene-RM610_RS08820;Name=RM610_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08820;old_locus_tag=RM610_08855 NZ_JAVRJX010000003.1 Protein Homology CDS 178770 180377 . - 0 ID=cds-WP_311542151.1;Parent=gene-RM610_RS08820;Dbxref=GenBank:WP_311542151.1;Name=WP_311542151.1;Ontology_term=GO:0019865;gbkey=CDS;go_function=immunoglobulin binding|0019865||IEA;inference=COORDINATES: protein motif:HMM:NF014293.7;locus_tag=RM610_RS08820;product=B domain-containing protein;protein_id=WP_311542151.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 180596 181483 . + . ID=gene-RM610_RS08825;Name=RM610_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08825;old_locus_tag=RM610_08860 NZ_JAVRJX010000003.1 Protein Homology CDS 180596 181483 . + 0 ID=cds-WP_375712212.1;Parent=gene-RM610_RS08825;Dbxref=GenBank:WP_375712212.1;Name=WP_375712212.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176733.1;locus_tag=RM610_RS08825;product=alpha/beta hydrolase;protein_id=WP_375712212.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 181706 182203 . + . ID=gene-RM610_RS08830;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM610_RS08830;old_locus_tag=RM610_08865 NZ_JAVRJX010000003.1 Protein Homology CDS 181706 182203 . + 0 ID=cds-WP_107369928.1;Parent=gene-RM610_RS08830;Dbxref=GenBank:WP_107369928.1;Name=WP_107369928.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM610_RS08830;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_107369928.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 182385 182852 . + . ID=gene-RM610_RS08835;Name=RM610_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08835;old_locus_tag=RM610_08870 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 182385 182852 . + 0 ID=cds-WP_311542153.1;Parent=gene-RM610_RS08835;Dbxref=GenBank:WP_311542153.1;Name=WP_311542153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS08835;product=hypothetical protein;protein_id=WP_311542153.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 182863 183066 . + . ID=gene-RM610_RS08840;Name=RM610_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08840;old_locus_tag=RM610_08875 NZ_JAVRJX010000003.1 Protein Homology CDS 182863 183066 . + 0 ID=cds-WP_182472290.1;Parent=gene-RM610_RS08840;Dbxref=GenBank:WP_182472290.1;Name=WP_182472290.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612697.1;locus_tag=RM610_RS08840;product=helix-turn-helix domain-containing protein;protein_id=WP_182472290.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 183428 184516 . + . ID=gene-RM610_RS08845;Name=RM610_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08845;old_locus_tag=RM610_08880 NZ_JAVRJX010000003.1 Protein Homology CDS 183428 184516 . + 0 ID=cds-WP_311542183.1;Parent=gene-RM610_RS08845;Dbxref=GenBank:WP_311542183.1;Name=WP_311542183.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF016150.7;locus_tag=RM610_RS08845;product=DUF418 domain-containing protein;protein_id=WP_311542183.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 184542 185282 . + . ID=gene-RM610_RS08850;Name=RM610_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08850;old_locus_tag=RM610_08885 NZ_JAVRJX010000003.1 Protein Homology CDS 184542 185282 . + 0 ID=cds-WP_311542154.1;Parent=gene-RM610_RS08850;Dbxref=GenBank:WP_311542154.1;Name=WP_311542154.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM610_RS08850;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311542154.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 185523 186260 . + . ID=gene-RM610_RS08855;Name=RM610_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08855;old_locus_tag=RM610_08890 NZ_JAVRJX010000003.1 Protein Homology CDS 185523 186260 . + 0 ID=cds-WP_311542155.1;Parent=gene-RM610_RS08855;Dbxref=GenBank:WP_311542155.1;Name=WP_311542155.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804655.1;locus_tag=RM610_RS08855;product=GntR family transcriptional regulator;protein_id=WP_311542155.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 186506 187213 . + . ID=gene-RM610_RS08860;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM610_RS08860;old_locus_tag=RM610_08895 NZ_JAVRJX010000003.1 Protein Homology CDS 186506 187213 . + 0 ID=cds-WP_107376166.1;Parent=gene-RM610_RS08860;Dbxref=GenBank:WP_107376166.1;Name=WP_107376166.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011248855.1;locus_tag=RM610_RS08860;product=purine-nucleoside phosphorylase;protein_id=WP_107376166.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 187227 188585 . + . ID=gene-RM610_RS08865;Name=RM610_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08865;old_locus_tag=RM610_08900 NZ_JAVRJX010000003.1 Protein Homology CDS 187227 188585 . + 0 ID=cds-WP_107358194.1;Parent=gene-RM610_RS08865;Dbxref=GenBank:WP_107358194.1;Name=WP_107358194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425879.1;locus_tag=RM610_RS08865;product=MFS transporter;protein_id=WP_107358194.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 188598 189260 . + . ID=gene-RM610_RS08870;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM610_RS08870;old_locus_tag=RM610_08905 NZ_JAVRJX010000003.1 Protein Homology CDS 188598 189260 . + 0 ID=cds-WP_107381869.1;Parent=gene-RM610_RS08870;Dbxref=GenBank:WP_107381869.1;Name=WP_107381869.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM610_RS08870;product=deoxyribose-phosphate aldolase;protein_id=WP_107381869.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 189296 190471 . + . ID=gene-RM610_RS08875;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM610_RS08875;old_locus_tag=RM610_08910 NZ_JAVRJX010000003.1 Protein Homology CDS 189296 190471 . + 0 ID=cds-WP_311542156.1;Parent=gene-RM610_RS08875;Dbxref=GenBank:WP_311542156.1;Name=WP_311542156.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425881.1;locus_tag=RM610_RS08875;product=phosphopentomutase;protein_id=WP_311542156.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 190625 191488 . + . ID=gene-RM610_RS08880;Name=RM610_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08880;old_locus_tag=RM610_08915 NZ_JAVRJX010000003.1 Protein Homology CDS 190625 191488 . + 0 ID=cds-WP_311542157.1;Parent=gene-RM610_RS08880;Dbxref=GenBank:WP_311542157.1;Name=WP_311542157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719336.1;locus_tag=RM610_RS08880;product=alpha/beta hydrolase;protein_id=WP_311542157.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 191527 192261 . - . ID=gene-RM610_RS08885;Name=RM610_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08885;old_locus_tag=RM610_08920 NZ_JAVRJX010000003.1 Protein Homology CDS 191527 192261 . - 0 ID=cds-WP_107381853.1;Parent=gene-RM610_RS08885;Dbxref=GenBank:WP_107381853.1;Name=WP_107381853.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901672.1;locus_tag=RM610_RS08885;product=NAD-dependent protein deacylase;protein_id=WP_107381853.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 192425 192922 . + . ID=gene-RM610_RS08890;Name=RM610_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08890;old_locus_tag=RM610_08925 NZ_JAVRJX010000003.1 Protein Homology CDS 192425 192922 . + 0 ID=cds-WP_157948412.1;Parent=gene-RM610_RS08890;Dbxref=GenBank:WP_157948412.1;Name=WP_157948412.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM610_RS08890;product=DUF805 domain-containing protein;protein_id=WP_157948412.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 193113 193613 . + . ID=gene-RM610_RS08895;Name=RM610_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08895;old_locus_tag=RM610_08930 NZ_JAVRJX010000003.1 Protein Homology CDS 193113 193613 . + 0 ID=cds-WP_311542158.1;Parent=gene-RM610_RS08895;Dbxref=GenBank:WP_311542158.1;Name=WP_311542158.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM610_RS08895;product=DUF805 domain-containing protein;protein_id=WP_311542158.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 193824 195206 . + . ID=gene-RM610_RS08900;Name=RM610_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08900;old_locus_tag=RM610_08935 NZ_JAVRJX010000003.1 Protein Homology CDS 193824 195206 . + 0 ID=cds-WP_311542159.1;Parent=gene-RM610_RS08900;Dbxref=GenBank:WP_311542159.1;Name=WP_311542159.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510650.1;locus_tag=RM610_RS08900;product=cryptochrome/photolyase family protein;protein_id=WP_311542159.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 195362 195970 . - . ID=gene-RM610_RS08905;Name=RM610_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08905;old_locus_tag=RM610_08940 NZ_JAVRJX010000003.1 Protein Homology CDS 195362 195970 . - 0 ID=cds-WP_311542160.1;Parent=gene-RM610_RS08905;Dbxref=GenBank:WP_311542160.1;Name=WP_311542160.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506433.1;locus_tag=RM610_RS08905;product=class I SAM-dependent methyltransferase;protein_id=WP_311542160.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 196151 197344 . + . ID=gene-RM610_RS08910;Name=RM610_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08910;old_locus_tag=RM610_08945 NZ_JAVRJX010000003.1 Protein Homology CDS 196151 197344 . + 0 ID=cds-WP_311542161.1;Parent=gene-RM610_RS08910;Dbxref=GenBank:WP_311542161.1;Name=WP_311542161.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806514.1;locus_tag=RM610_RS08910;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311542161.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 197470 197673 . + . ID=gene-RM610_RS08915;Name=RM610_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08915;old_locus_tag=RM610_08950 NZ_JAVRJX010000003.1 Protein Homology CDS 197470 197673 . + 0 ID=cds-WP_037576741.1;Parent=gene-RM610_RS08915;Dbxref=GenBank:WP_037576741.1;Name=WP_037576741.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=RM610_RS08915;product=helix-turn-helix transcriptional regulator;protein_id=WP_037576741.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 197670 198389 . + . ID=gene-RM610_RS08920;Name=RM610_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08920;old_locus_tag=RM610_08955 NZ_JAVRJX010000003.1 Protein Homology CDS 197670 198389 . + 0 ID=cds-WP_194746453.1;Parent=gene-RM610_RS08920;Dbxref=GenBank:WP_194746453.1;Name=WP_194746453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.7;locus_tag=RM610_RS08920;product=DUF3169 family protein;protein_id=WP_194746453.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 198582 199118 . + . ID=gene-RM610_RS08925;Name=RM610_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08925;old_locus_tag=RM610_08960 NZ_JAVRJX010000003.1 Protein Homology CDS 198582 199118 . + 0 ID=cds-WP_107358205.1;Parent=gene-RM610_RS08925;Dbxref=GenBank:WP_107358205.1;Name=WP_107358205.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464354.1;locus_tag=RM610_RS08925;product=TetR/AcrR family transcriptional regulator;protein_id=WP_107358205.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 199471 200667 . + . ID=gene-RM610_RS08930;Name=RM610_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08930;old_locus_tag=RM610_08965 NZ_JAVRJX010000003.1 Protein Homology CDS 199471 200667 . + 0 ID=cds-WP_107358206.1;Parent=gene-RM610_RS08930;Dbxref=GenBank:WP_107358206.1;Name=WP_107358206.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473374.1;locus_tag=RM610_RS08930;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_107358206.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 200664 201299 . + . ID=gene-RM610_RS08935;Name=RM610_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08935;old_locus_tag=RM610_08970 NZ_JAVRJX010000003.1 Protein Homology CDS 200664 201299 . + 0 ID=cds-WP_107358207.1;Parent=gene-RM610_RS08935;Dbxref=GenBank:WP_107358207.1;Name=WP_107358207.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471024.1;locus_tag=RM610_RS08935;product=ABC transporter permease;protein_id=WP_107358207.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 201317 202258 . + . ID=gene-RM610_RS08940;Name=RM610_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08940;old_locus_tag=RM610_08975 NZ_JAVRJX010000003.1 Protein Homology CDS 201317 202258 . + 0 ID=cds-WP_107358208.1;Parent=gene-RM610_RS08940;Dbxref=GenBank:WP_107358208.1;Name=WP_107358208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302416.1;locus_tag=RM610_RS08940;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_107358208.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 202258 202935 . + . ID=gene-RM610_RS08945;Name=RM610_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08945;old_locus_tag=RM610_08980 NZ_JAVRJX010000003.1 Protein Homology CDS 202258 202935 . + 0 ID=cds-WP_037576723.1;Parent=gene-RM610_RS08945;Dbxref=GenBank:WP_037576723.1;Name=WP_037576723.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470117.1;locus_tag=RM610_RS08945;product=ABC transporter permease;protein_id=WP_037576723.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 202951 203667 . + . ID=gene-RM610_RS08950;Name=RM610_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08950;old_locus_tag=RM610_08985 NZ_JAVRJX010000003.1 Protein Homology CDS 202951 203667 . + 0 ID=cds-WP_311542162.1;Parent=gene-RM610_RS08950;Dbxref=GenBank:WP_311542162.1;Name=WP_311542162.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323457.1;locus_tag=RM610_RS08950;product=alpha/beta hydrolase;protein_id=WP_311542162.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 203860 204969 . + . ID=gene-RM610_RS08955;Name=RM610_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08955;old_locus_tag=RM610_08990 NZ_JAVRJX010000003.1 Protein Homology CDS 203860 204969 . + 0 ID=cds-WP_311542163.1;Parent=gene-RM610_RS08955;Dbxref=GenBank:WP_311542163.1;Name=WP_311542163.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168901.1;locus_tag=RM610_RS08955;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311542163.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 204963 206312 . + . ID=gene-RM610_RS08960;Name=RM610_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08960;old_locus_tag=RM610_08995 NZ_JAVRJX010000003.1 Protein Homology CDS 204963 206312 . + 0 ID=cds-WP_311542164.1;Parent=gene-RM610_RS08960;Dbxref=GenBank:WP_311542164.1;Name=WP_311542164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=RM610_RS08960;product=nucleoside recognition domain-containing protein;protein_id=WP_311542164.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 206498 207205 . - . ID=gene-RM610_RS08965;Name=RM610_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08965;old_locus_tag=RM610_09000 NZ_JAVRJX010000003.1 Protein Homology CDS 206498 207205 . - 0 ID=cds-WP_107381132.1;Parent=gene-RM610_RS08965;Dbxref=GenBank:WP_107381132.1;Name=WP_107381132.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM610_RS08965;product=Crp/Fnr family transcriptional regulator;protein_id=WP_107381132.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 207227 208168 . - . ID=gene-RM610_RS08970;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=RM610_RS08970;old_locus_tag=RM610_09005 NZ_JAVRJX010000003.1 Protein Homology CDS 207227 208168 . - 0 ID=cds-WP_107375383.1;Parent=gene-RM610_RS08970;Dbxref=GenBank:WP_107375383.1;Name=WP_107375383.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660031.1;locus_tag=RM610_RS08970;product=carbamate kinase;protein_id=WP_107375383.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 208185 209603 . - . ID=gene-RM610_RS08975;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=RM610_RS08975;old_locus_tag=RM610_09010 NZ_JAVRJX010000003.1 Protein Homology CDS 208185 209603 . - 0 ID=cds-WP_107381130.1;Parent=gene-RM610_RS08975;Dbxref=GenBank:WP_107381130.1;Name=WP_107381130.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464536.1;locus_tag=RM610_RS08975;product=arginine-ornithine antiporter;protein_id=WP_107381130.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 209701 210708 . - . ID=gene-RM610_RS08980;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM610_RS08980;old_locus_tag=RM610_09015 NZ_JAVRJX010000003.1 Protein Homology CDS 209701 210708 . - 0 ID=cds-WP_107375385.1;Parent=gene-RM610_RS08980;Dbxref=GenBank:WP_107375385.1;Name=WP_107375385.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165722.1;locus_tag=RM610_RS08980;product=ornithine carbamoyltransferase;protein_id=WP_107375385.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 210732 211958 . - . ID=gene-RM610_RS08985;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=RM610_RS08985;old_locus_tag=RM610_09020 NZ_JAVRJX010000003.1 Protein Homology CDS 210732 211958 . - 0 ID=cds-WP_311542165.1;Parent=gene-RM610_RS08985;Dbxref=GenBank:WP_311542165.1;Name=WP_311542165.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175479.1;locus_tag=RM610_RS08985;product=arginine deiminase;protein_id=WP_311542165.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 212200 212658 . - . ID=gene-RM610_RS08990;Name=RM610_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08990;old_locus_tag=RM610_09025 NZ_JAVRJX010000003.1 Protein Homology CDS 212200 212658 . - 0 ID=cds-WP_107375387.1;Parent=gene-RM610_RS08990;Dbxref=GenBank:WP_107375387.1;Name=WP_107375387.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: protein motif:HMM:NF014864.7;locus_tag=RM610_RS08990;product=arginine repressor;protein_id=WP_107375387.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 212967 214136 . + . ID=gene-RM610_RS08995;Name=RM610_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS08995;old_locus_tag=RM610_09030 NZ_JAVRJX010000003.1 Protein Homology CDS 212967 214136 . + 0 ID=cds-WP_107369090.1;Parent=gene-RM610_RS08995;Dbxref=GenBank:WP_107369090.1;Name=WP_107369090.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930609.1;locus_tag=RM610_RS08995;product=MFS transporter;protein_id=WP_107369090.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 214216 214326 . - . ID=gene-RM610_RS09000;Name=RM610_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09000;old_locus_tag=RM610_09035 NZ_JAVRJX010000003.1 Protein Homology CDS 214216 214326 . - 0 ID=cds-WP_069191690.1;Parent=gene-RM610_RS09000;Dbxref=GenBank:WP_069191690.1;Name=WP_069191690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468545.1;locus_tag=RM610_RS09000;product=SE2200 family small protein;protein_id=WP_069191690.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 214344 215837 . - . ID=gene-RM610_RS09005;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM610_RS09005;old_locus_tag=RM610_09040 NZ_JAVRJX010000003.1 Protein Homology CDS 214344 215837 . - 0 ID=cds-WP_105986768.1;Parent=gene-RM610_RS09005;Dbxref=GenBank:WP_105986768.1;Name=WP_105986768.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=RM610_RS09005;product=L-lactate dehydrogenase (quinone);protein_id=WP_105986768.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 215998 216498 . - . ID=gene-RM610_RS09010;Name=RM610_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09010;old_locus_tag=RM610_09045 NZ_JAVRJX010000003.1 Protein Homology CDS 215998 216498 . - 0 ID=cds-WP_311542166.1;Parent=gene-RM610_RS09010;Dbxref=GenBank:WP_311542166.1;Name=WP_311542166.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664111.1;locus_tag=RM610_RS09010;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_311542166.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 216876 218261 . - . ID=gene-RM610_RS09015;Name=RM610_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09015;old_locus_tag=RM610_09050 NZ_JAVRJX010000003.1 Protein Homology CDS 216876 218261 . - 0 ID=cds-WP_311542167.1;Parent=gene-RM610_RS09015;Dbxref=GenBank:WP_311542167.1;Name=WP_311542167.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471872.1;locus_tag=RM610_RS09015;product=amino acid permease;protein_id=WP_311542167.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 218856 219404 . + . ID=gene-RM610_RS09020;Name=RM610_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09020;old_locus_tag=RM610_09055 NZ_JAVRJX010000003.1 Protein Homology CDS 218856 219404 . + 0 ID=cds-WP_107358222.1;Parent=gene-RM610_RS09020;Dbxref=GenBank:WP_107358222.1;Name=WP_107358222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901526.1;locus_tag=RM610_RS09020;product=DUF4064 domain-containing protein;protein_id=WP_107358222.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 219506 220669 . + . ID=gene-RM610_RS09025;Name=RM610_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09025;old_locus_tag=RM610_09060 NZ_JAVRJX010000003.1 Protein Homology CDS 219506 220669 . + 0 ID=cds-WP_311542168.1;Parent=gene-RM610_RS09025;Dbxref=GenBank:WP_311542168.1;Name=WP_311542168.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482272.1;locus_tag=RM610_RS09025;product=amidohydrolase;protein_id=WP_311542168.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 220765 221433 . + . ID=gene-RM610_RS09030;Name=RM610_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09030;old_locus_tag=RM610_09065 NZ_JAVRJX010000003.1 Protein Homology CDS 220765 221433 . + 0 ID=cds-WP_105965794.1;Parent=gene-RM610_RS09030;Dbxref=GenBank:WP_105965794.1;Name=WP_105965794.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466597.1;locus_tag=RM610_RS09030;product=response regulator transcription factor;protein_id=WP_105965794.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 221516 222424 . + . ID=gene-RM610_RS09035;Name=RM610_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09035;old_locus_tag=RM610_09070 NZ_JAVRJX010000003.1 Protein Homology CDS 221516 222424 . + 0 ID=cds-WP_107358225.1;Parent=gene-RM610_RS09035;Dbxref=GenBank:WP_107358225.1;Name=WP_107358225.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488479.1;locus_tag=RM610_RS09035;product=ABC transporter ATP-binding protein;protein_id=WP_107358225.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 222424 223173 . + . ID=gene-RM610_RS09040;Name=RM610_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09040;old_locus_tag=RM610_09075 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 222424 223173 . + 0 ID=cds-WP_107375805.1;Parent=gene-RM610_RS09040;Dbxref=GenBank:WP_107375805.1;Name=WP_107375805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09040;product=hypothetical protein;protein_id=WP_107375805.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 223197 224099 . + . ID=gene-RM610_RS09045;Name=RM610_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09045;old_locus_tag=RM610_09080 NZ_JAVRJX010000003.1 Protein Homology CDS 223197 224099 . + 0 ID=cds-WP_311542169.1;Parent=gene-RM610_RS09045;Dbxref=GenBank:WP_311542169.1;Name=WP_311542169.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025854.7;locus_tag=RM610_RS09045;product=sensor histidine kinase;protein_id=WP_311542169.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 224159 224596 . - . ID=gene-RM610_RS09050;Name=RM610_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09050;old_locus_tag=RM610_09085 NZ_JAVRJX010000003.1 Protein Homology CDS 224159 224596 . - 0 ID=cds-WP_228512732.1;Parent=gene-RM610_RS09050;Dbxref=GenBank:WP_228512732.1;Name=WP_228512732.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507130.1;locus_tag=RM610_RS09050;product=VOC family protein;protein_id=WP_228512732.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 224726 225391 . + . ID=gene-RM610_RS09055;Name=RM610_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09055;old_locus_tag=RM610_09090 NZ_JAVRJX010000003.1 Protein Homology CDS 224726 225391 . + 0 ID=cds-WP_107375806.1;Parent=gene-RM610_RS09055;Dbxref=GenBank:WP_107375806.1;Name=WP_107375806.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363890.1;locus_tag=RM610_RS09055;product=response regulator transcription factor;protein_id=WP_107375806.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 225423 226310 . + . ID=gene-RM610_RS09060;Name=RM610_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09060;old_locus_tag=RM610_09095 NZ_JAVRJX010000003.1 Protein Homology CDS 225423 226310 . + 0 ID=cds-WP_241955472.1;Parent=gene-RM610_RS09060;Dbxref=GenBank:WP_241955472.1;Name=WP_241955472.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492577.1;locus_tag=RM610_RS09060;product=sensor histidine kinase;protein_id=WP_241955472.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 226400 227149 . + . ID=gene-RM610_RS09065;Name=RM610_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09065;old_locus_tag=RM610_09100 NZ_JAVRJX010000003.1 Protein Homology CDS 226400 227149 . + 0 ID=cds-WP_037576681.1;Parent=gene-RM610_RS09065;Dbxref=GenBank:WP_037576681.1;Name=WP_037576681.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382394.1;locus_tag=RM610_RS09065;product=ABC transporter ATP-binding protein;protein_id=WP_037576681.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 227151 229133 . + . ID=gene-RM610_RS09070;Name=RM610_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09070;old_locus_tag=RM610_09105 NZ_JAVRJX010000003.1 Protein Homology CDS 227151 229133 . + 0 ID=cds-WP_157947104.1;Parent=gene-RM610_RS09070;Dbxref=GenBank:WP_157947104.1;Name=WP_157947104.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.8;locus_tag=RM610_RS09070;product=FtsX-like permease family protein;protein_id=WP_157947104.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 229178 229804 . - . ID=gene-RM610_RS09075;Name=RM610_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09075;old_locus_tag=RM610_09110 NZ_JAVRJX010000003.1 Protein Homology CDS 229178 229804 . - 0 ID=cds-WP_037576676.1;Parent=gene-RM610_RS09075;Dbxref=GenBank:WP_037576676.1;Name=WP_037576676.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=RM610_RS09075;product=FMN-dependent NADH-azoreductase;protein_id=WP_037576676.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 230040 230360 . - . ID=gene-RM610_RS09080;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=RM610_RS09080;old_locus_tag=RM610_09115 NZ_JAVRJX010000003.1 Protein Homology CDS 230040 230360 . - 0 ID=cds-WP_311542170.1;Parent=gene-RM610_RS09080;Dbxref=GenBank:WP_311542170.1;Name=WP_311542170.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166845.1;locus_tag=RM610_RS09080;product=SPIN family peroxidase inhibitor;protein_id=WP_311542170.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 231248 232831 . + . ID=gene-RM610_RS09085;Name=mbcS;gbkey=Gene;gene=mbcS;gene_biotype=protein_coding;locus_tag=RM610_RS09085;old_locus_tag=RM610_09120 NZ_JAVRJX010000003.1 Protein Homology CDS 231248 232831 . + 0 ID=cds-WP_311542171.1;Parent=gene-RM610_RS09085;Dbxref=GenBank:WP_311542171.1;Name=WP_311542171.1;gbkey=CDS;gene=mbcS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505544.1;locus_tag=RM610_RS09085;product=acyl-CoA synthetase MbcS;protein_id=WP_311542171.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 232976 233224 . - . ID=gene-RM610_RS09090;Name=RM610_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09090;old_locus_tag=RM610_09125 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 232976 233224 . - 0 ID=cds-WP_133170546.1;Parent=gene-RM610_RS09090;Dbxref=GenBank:WP_133170546.1;Name=WP_133170546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09090;product=hypothetical protein;protein_id=WP_133170546.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 233274 234935 . - . ID=gene-RM610_RS09095;Name=RM610_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09095;old_locus_tag=RM610_09130 NZ_JAVRJX010000003.1 Protein Homology CDS 233274 234935 . - 0 ID=cds-WP_311542172.1;Parent=gene-RM610_RS09095;Dbxref=GenBank:WP_311542172.1;Name=WP_311542172.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435045.1;locus_tag=RM610_RS09095;product=FAD-binding dehydrogenase;protein_id=WP_311542172.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 235273 235914 . + . ID=gene-RM610_RS09100;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=RM610_RS09100;old_locus_tag=RM610_09135 NZ_JAVRJX010000003.1 Protein Homology CDS 235273 235914 . + 0 ID=cds-WP_037576666.1;Parent=gene-RM610_RS09100;Dbxref=GenBank:WP_037576666.1;Name=WP_037576666.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018780762.1;locus_tag=RM610_RS09100;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_037576666.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 236001 236423 . - . ID=gene-RM610_RS09105;Name=RM610_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09105;old_locus_tag=RM610_09140 NZ_JAVRJX010000003.1 Protein Homology CDS 236001 236423 . - 0 ID=cds-WP_311542173.1;Parent=gene-RM610_RS09105;Dbxref=GenBank:WP_311542173.1;Name=WP_311542173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=RM610_RS09105;product=Hsp20/alpha crystallin family protein;protein_id=WP_311542173.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 236609 237931 . - . ID=gene-RM610_RS09110;Name=RM610_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09110;old_locus_tag=RM610_09145 NZ_JAVRJX010000003.1 Protein Homology CDS 236609 237931 . - 0 ID=cds-WP_311542174.1;Parent=gene-RM610_RS09110;Dbxref=GenBank:WP_311542174.1;Name=WP_311542174.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498867.1;locus_tag=RM610_RS09110;product=Nramp family divalent metal transporter;protein_id=WP_311542174.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 238183 238875 . + . ID=gene-RM610_RS09115;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=RM610_RS09115;old_locus_tag=RM610_09150 NZ_JAVRJX010000003.1 Protein Homology CDS 238183 238875 . + 0 ID=cds-WP_311542175.1;Parent=gene-RM610_RS09115;Dbxref=GenBank:WP_311542175.1;Name=WP_311542175.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=RM610_RS09115;product=dethiobiotin synthase;protein_id=WP_311542175.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 238850 240199 . + . ID=gene-RM610_RS09120;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=RM610_RS09120;old_locus_tag=RM610_09155 NZ_JAVRJX010000003.1 Protein Homology CDS 238850 240199 . + 0 ID=cds-WP_311542176.1;Parent=gene-RM610_RS09120;Dbxref=GenBank:WP_311542176.1;Name=WP_311542176.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=RM610_RS09120;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_311542176.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 240201 241313 . + . ID=gene-RM610_RS09125;Name=RM610_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09125;old_locus_tag=RM610_09160 NZ_JAVRJX010000003.1 Protein Homology CDS 240201 241313 . + 0 ID=cds-WP_311542177.1;Parent=gene-RM610_RS09125;Dbxref=GenBank:WP_311542177.1;Name=WP_311542177.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219974.1;locus_tag=RM610_RS09125;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311542177.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 241306 241986 . + . ID=gene-RM610_RS09130;Name=RM610_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09130;old_locus_tag=RM610_09165 NZ_JAVRJX010000003.1 Protein Homology CDS 241306 241986 . + 0 ID=cds-WP_311542178.1;Parent=gene-RM610_RS09130;Dbxref=GenBank:WP_311542178.1;Name=WP_311542178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472102.1;locus_tag=RM610_RS09130;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_311542178.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 242033 243625 . - . ID=gene-RM610_RS09135;Name=RM610_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09135;old_locus_tag=RM610_09170 NZ_JAVRJX010000003.1 Protein Homology CDS 242033 243625 . - 0 ID=cds-WP_107369066.1;Parent=gene-RM610_RS09135;Dbxref=GenBank:WP_107369066.1;Name=WP_107369066.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506551.1;locus_tag=RM610_RS09135;product=L-lactate permease;protein_id=WP_107369066.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 244612 244743 . + . ID=gene-RM610_RS09140;Name=RM610_RS09140;end_range=244743,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS09140;old_locus_tag=RM610_09175;partial=true;pseudo=true NZ_JAVRJX010000003.1 Protein Homology CDS 244612 244743 . + 0 ID=cds-RM610_RS09140;Parent=gene-RM610_RS09140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=244743,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040237.6;locus_tag=RM610_RS09140;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJX010000003.1 RefSeq gene 245169 245366 . - . ID=gene-RM610_RS09145;Name=RM610_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09145;old_locus_tag=RM610_09180 NZ_JAVRJX010000003.1 GeneMarkS-2+ CDS 245169 245366 . - 0 ID=cds-WP_311542179.1;Parent=gene-RM610_RS09145;Dbxref=GenBank:WP_311542179.1;Name=WP_311542179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09145;product=hypothetical protein;protein_id=WP_311542179.1;transl_table=11 NZ_JAVRJX010000003.1 RefSeq pseudogene 245980 249536 . + . ID=gene-RM610_RS12075;Name=RM610_RS12075;end_range=249536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12075;partial=true;pseudo=true;start_range=.,245980 NZ_JAVRJX010000003.1 Protein Homology CDS 245980 249536 . + 0 ID=cds-RM610_RS12075;Parent=gene-RM610_RS12075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=249536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502621.1;locus_tag=RM610_RS12075;partial=true;product=hypothetical protein;pseudo=true;start_range=.,245980;transl_table=11 ##sequence-region NZ_JAVRJX010000004.1 1 246606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000004.1 RefSeq region 1 246606 . + . ID=NZ_JAVRJX010000004.1:1..246606;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000004.1 RefSeq gene 77 400 . - . ID=gene-RM610_RS09155;Name=qacJ;gbkey=Gene;gene=qacJ;gene_biotype=protein_coding;locus_tag=RM610_RS09155;old_locus_tag=RM610_09190 NZ_JAVRJX010000004.1 Protein Homology CDS 77 400 . - 0 ID=cds-WP_064127842.1;Parent=gene-RM610_RS09155;Dbxref=GenBank:WP_064127842.1;Name=WP_064127842.1;gbkey=CDS;gene=qacJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011100750.1;locus_tag=RM610_RS09155;product=quaternary ammonium compound efflux SMR transporter QacJ;protein_id=WP_064127842.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 725 1723 . + . ID=gene-RM610_RS09160;Name=RM610_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09160;old_locus_tag=RM610_09195 NZ_JAVRJX010000004.1 Protein Homology CDS 725 1723 . + 0 ID=cds-WP_094659672.1;Parent=gene-RM610_RS09160;Dbxref=GenBank:WP_094659672.1;Name=WP_094659672.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199881.1;locus_tag=RM610_RS09160;product=protein rep;protein_id=WP_094659672.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 2725 2979 . + . ID=gene-RM610_RS09165;Name=RM610_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09165;old_locus_tag=RM610_09200 NZ_JAVRJX010000004.1 Protein Homology CDS 2725 2979 . + 0 ID=cds-WP_311542184.1;Parent=gene-RM610_RS09165;Dbxref=GenBank:WP_311542184.1;Name=WP_311542184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449160.1;locus_tag=RM610_RS09165;product=hypothetical protein;protein_id=WP_311542184.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 3248 4906 . - . ID=gene-RM610_RS09170;Name=RM610_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09170;old_locus_tag=RM610_09205 NZ_JAVRJX010000004.1 Protein Homology CDS 3248 4906 . - 0 ID=cds-WP_311542185.1;Parent=gene-RM610_RS09170;Dbxref=GenBank:WP_311542185.1;Name=WP_311542185.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433835.1;locus_tag=RM610_RS09170;product=glycoside hydrolase family 13 protein;protein_id=WP_311542185.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 5220 6215 . + . ID=gene-RM610_RS09175;Name=RM610_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09175;old_locus_tag=RM610_09210 NZ_JAVRJX010000004.1 Protein Homology CDS 5220 6215 . + 0 ID=cds-WP_107522398.1;Parent=gene-RM610_RS09175;Dbxref=GenBank:WP_107522398.1;Name=WP_107522398.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729787.1;locus_tag=RM610_RS09175;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_107522398.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 6373 7773 . + . ID=gene-RM610_RS09180;Name=RM610_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09180;old_locus_tag=RM610_09215 NZ_JAVRJX010000004.1 Protein Homology CDS 6373 7773 . + 0 ID=cds-WP_107376013.1;Parent=gene-RM610_RS09180;Dbxref=GenBank:WP_107376013.1;Name=WP_107376013.1;Ontology_term=GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469141.1;locus_tag=RM610_RS09180;product=SLC45 family MFS transporter;protein_id=WP_107376013.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 8047 8586 . + . ID=gene-RM610_RS09185;Name=RM610_RS09185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS09185;old_locus_tag=RM610_09220;partial=true;pseudo=true;start_range=.,8047 NZ_JAVRJX010000004.1 Protein Homology CDS 8047 8586 . + 0 ID=cds-RM610_RS09185;Parent=gene-RM610_RS09185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0045454;gbkey=CDS;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612809.1;locus_tag=RM610_RS09185;partial=true;product=oxidoreductase dimerization domain-containing protein;pseudo=true;start_range=.,8047;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 8627 9379 . - . ID=gene-RM610_RS09190;Name=RM610_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09190;old_locus_tag=RM610_09225 NZ_JAVRJX010000004.1 Protein Homology CDS 8627 9379 . - 0 ID=cds-WP_107376011.1;Parent=gene-RM610_RS09190;Dbxref=GenBank:WP_107376011.1;Name=WP_107376011.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501965.1;locus_tag=RM610_RS09190;product=sulfite exporter TauE/SafE family protein;protein_id=WP_107376011.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 9382 9642 . - . ID=gene-RM610_RS09195;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=RM610_RS09195;old_locus_tag=RM610_09230 NZ_JAVRJX010000004.1 Protein Homology CDS 9382 9642 . - 0 ID=cds-WP_037576274.1;Parent=gene-RM610_RS09195;Dbxref=GenBank:WP_037576274.1;Name=WP_037576274.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911203.1;locus_tag=RM610_RS09195;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_037576274.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 9780 10859 . + . ID=gene-RM610_RS09200;Name=RM610_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09200;old_locus_tag=RM610_09235 NZ_JAVRJX010000004.1 Protein Homology CDS 9780 10859 . + 0 ID=cds-WP_311542186.1;Parent=gene-RM610_RS09200;Dbxref=GenBank:WP_311542186.1;Name=WP_311542186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236144.1;locus_tag=RM610_RS09200;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_311542186.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 10872 12212 . + . ID=gene-RM610_RS09205;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=RM610_RS09205;old_locus_tag=RM610_09240 NZ_JAVRJX010000004.1 Protein Homology CDS 10872 12212 . + 0 ID=cds-WP_311542187.1;Parent=gene-RM610_RS09205;Dbxref=GenBank:WP_311542187.1;Name=WP_311542187.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511663.1;locus_tag=RM610_RS09205;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_311542187.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 12341 13306 . + . ID=gene-RM610_RS09210;Name=RM610_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09210;old_locus_tag=RM610_09245 NZ_JAVRJX010000004.1 Protein Homology CDS 12341 13306 . + 0 ID=cds-WP_311542188.1;Parent=gene-RM610_RS09210;Dbxref=GenBank:WP_311542188.1;Name=WP_311542188.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=RM610_RS09210;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_311542188.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 13309 14190 . + . ID=gene-RM610_RS09215;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=RM610_RS09215;old_locus_tag=RM610_09250 NZ_JAVRJX010000004.1 Protein Homology CDS 13309 14190 . + 0 ID=cds-WP_311542189.1;Parent=gene-RM610_RS09215;Dbxref=GenBank:WP_311542189.1;Name=WP_311542189.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175513.1;locus_tag=RM610_RS09215;product=ribokinase;protein_id=WP_311542189.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 14183 14572 . + . ID=gene-RM610_RS09220;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=RM610_RS09220;old_locus_tag=RM610_09255 NZ_JAVRJX010000004.1 Protein Homology CDS 14183 14572 . + 0 ID=cds-WP_107389553.1;Parent=gene-RM610_RS09220;Dbxref=GenBank:WP_107389553.1;Name=WP_107389553.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=RM610_RS09220;product=D-ribose pyranase;protein_id=WP_107389553.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 14585 16081 . + . ID=gene-RM610_RS09225;Name=RM610_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09225;old_locus_tag=RM610_09260 NZ_JAVRJX010000004.1 Protein Homology CDS 14585 16081 . + 0 ID=cds-WP_105967416.1;Parent=gene-RM610_RS09225;Dbxref=GenBank:WP_105967416.1;Name=WP_105967416.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930523.1;locus_tag=RM610_RS09225;product=sugar ABC transporter ATP-binding protein;protein_id=WP_105967416.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 16062 17000 . + . ID=gene-RM610_RS09230;Name=RM610_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09230;old_locus_tag=RM610_09265 NZ_JAVRJX010000004.1 Protein Homology CDS 16062 17000 . + 0 ID=cds-WP_105967417.1;Parent=gene-RM610_RS09230;Dbxref=GenBank:WP_105967417.1;Name=WP_105967417.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274507.1;locus_tag=RM610_RS09230;product=ABC transporter permease subunit;protein_id=WP_105967417.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 17019 17933 . + . ID=gene-RM610_RS09235;Name=RM610_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09235;old_locus_tag=RM610_09270 NZ_JAVRJX010000004.1 Protein Homology CDS 17019 17933 . + 0 ID=cds-WP_105967418.1;Parent=gene-RM610_RS09235;Dbxref=GenBank:WP_105967418.1;Name=WP_105967418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003185844.1;locus_tag=RM610_RS09235;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_105967418.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 18389 19576 . - . ID=gene-RM610_RS09240;Name=RM610_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09240;old_locus_tag=RM610_09275 NZ_JAVRJX010000004.1 Protein Homology CDS 18389 19576 . - 0 ID=cds-WP_311542190.1;Parent=gene-RM610_RS09240;Dbxref=GenBank:WP_311542190.1;Name=WP_311542190.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509502.1;locus_tag=RM610_RS09240;product=MFS transporter;protein_id=WP_311542190.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 19696 20598 . + . ID=gene-RM610_RS09245;Name=RM610_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09245;old_locus_tag=RM610_09280 NZ_JAVRJX010000004.1 Protein Homology CDS 19696 20598 . + 0 ID=cds-WP_311542191.1;Parent=gene-RM610_RS09245;Dbxref=GenBank:WP_311542191.1;Name=WP_311542191.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484107.1;locus_tag=RM610_RS09245;product=LysR family transcriptional regulator;protein_id=WP_311542191.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 20682 21173 . + . ID=gene-RM610_RS09250;Name=RM610_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09250;old_locus_tag=RM610_09285 NZ_JAVRJX010000004.1 Protein Homology CDS 20682 21173 . + 0 ID=cds-WP_105967421.1;Parent=gene-RM610_RS09250;Dbxref=GenBank:WP_105967421.1;Name=WP_105967421.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612713.1;locus_tag=RM610_RS09250;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_105967421.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 21198 23201 . + . ID=gene-RM610_RS09255;Name=RM610_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09255;old_locus_tag=RM610_09290 NZ_JAVRJX010000004.1 Protein Homology CDS 21198 23201 . + 0 ID=cds-WP_105967422.1;Parent=gene-RM610_RS09255;Dbxref=GenBank:WP_105967422.1;Name=WP_105967422.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174984.1;locus_tag=RM610_RS09255;product=cation:proton antiporter;protein_id=WP_105967422.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 23578 24957 . + . ID=gene-RM610_RS09260;Name=RM610_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09260;old_locus_tag=RM610_09295 NZ_JAVRJX010000004.1 Protein Homology CDS 23578 24957 . + 0 ID=cds-WP_311542192.1;Parent=gene-RM610_RS09260;Dbxref=GenBank:WP_311542192.1;Name=WP_311542192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471268.1;locus_tag=RM610_RS09260;product=YjiH family protein;protein_id=WP_311542192.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 25028 26311 . - . ID=gene-RM610_RS09265;Name=RM610_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09265;old_locus_tag=RM610_09300 NZ_JAVRJX010000004.1 Protein Homology CDS 25028 26311 . - 0 ID=cds-WP_311542193.1;Parent=gene-RM610_RS09265;Dbxref=GenBank:WP_311542193.1;Name=WP_311542193.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=RM610_RS09265;product=YSIRK-type signal peptide-containing protein;protein_id=WP_311542193.1;transl_table=11 NZ_JAVRJX010000004.1 cmsearch riboswitch 26475 26572 . + . ID=id-NZ_JAVRJX010000004.1:26475..26572;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000004.1 RefSeq gene 26635 27912 . + . ID=gene-RM610_RS09270;Name=RM610_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09270;old_locus_tag=RM610_09305 NZ_JAVRJX010000004.1 Protein Homology CDS 26635 27912 . + 0 ID=cds-WP_107358265.1;Parent=gene-RM610_RS09270;Dbxref=GenBank:WP_107358265.1;Name=WP_107358265.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=RM610_RS09270;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_107358265.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 27929 28081 . + . ID=gene-RM610_RS09275;Name=RM610_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09275;old_locus_tag=RM610_09310 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 27929 28081 . + 0 ID=cds-WP_182474109.1;Parent=gene-RM610_RS09275;Dbxref=GenBank:WP_182474109.1;Name=WP_182474109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09275;product=hypothetical protein;protein_id=WP_182474109.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 28213 28905 . + . ID=gene-RM610_RS09280;Name=RM610_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09280;old_locus_tag=RM610_09315 NZ_JAVRJX010000004.1 Protein Homology CDS 28213 28905 . + 0 ID=cds-WP_107381405.1;Parent=gene-RM610_RS09280;Dbxref=GenBank:WP_107381405.1;Name=WP_107381405.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=RM610_RS09280;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_107381405.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 29184 30374 . + . ID=gene-RM610_RS09285;Name=RM610_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09285;old_locus_tag=RM610_09320 NZ_JAVRJX010000004.1 Protein Homology CDS 29184 30374 . + 0 ID=cds-WP_311542194.1;Parent=gene-RM610_RS09285;Dbxref=GenBank:WP_311542194.1;Name=WP_311542194.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM610_RS09285;product=MFS transporter;protein_id=WP_311542194.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 30826 31839 . - . ID=gene-RM610_RS09290;Name=RM610_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09290;old_locus_tag=RM610_09325 NZ_JAVRJX010000004.1 Protein Homology CDS 30826 31839 . - 0 ID=cds-WP_107389543.1;Parent=gene-RM610_RS09290;Dbxref=GenBank:WP_107389543.1;Name=WP_107389543.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019474.7;locus_tag=RM610_RS09290;product=alpha/beta hydrolase;protein_id=WP_107389543.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 32041 33045 . + . ID=gene-RM610_RS09295;Name=RM610_RS09295;end_range=33045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS09295;old_locus_tag=RM610_09330;partial=true;pseudo=true NZ_JAVRJX010000004.1 Protein Homology CDS 32041 33045 . + 0 ID=cds-RM610_RS09295;Parent=gene-RM610_RS09295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0030001,GO:0046872;end_range=33045,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727767.1;locus_tag=RM610_RS09295;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 33092 33985 . - . ID=gene-RM610_RS09300;Name=RM610_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09300;old_locus_tag=RM610_09335 NZ_JAVRJX010000004.1 Protein Homology CDS 33092 33985 . - 0 ID=cds-WP_105967429.1;Parent=gene-RM610_RS09300;Dbxref=GenBank:WP_105967429.1;Name=WP_105967429.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471440.1;locus_tag=RM610_RS09300;product=fructose bisphosphate aldolase;protein_id=WP_105967429.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 34034 34186 . + . ID=gene-RM610_RS09305;Name=RM610_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09305;old_locus_tag=RM610_09340 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 34034 34186 . + 0 ID=cds-WP_311542195.1;Parent=gene-RM610_RS09305;Dbxref=GenBank:WP_311542195.1;Name=WP_311542195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09305;product=hypothetical protein;protein_id=WP_311542195.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 34283 35476 . - . ID=gene-RM610_RS09310;Name=tcaB;gbkey=Gene;gene=tcaB;gene_biotype=protein_coding;locus_tag=RM610_RS09310;old_locus_tag=RM610_09345 NZ_JAVRJX010000004.1 Protein Homology CDS 34283 35476 . - 0 ID=cds-WP_311542196.1;Parent=gene-RM610_RS09310;Dbxref=GenBank:WP_311542196.1;Name=WP_311542196.1;gbkey=CDS;gene=tcaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168887.1;locus_tag=RM610_RS09310;product=putative multidrug effflux MFS transporter TcaB;protein_id=WP_311542196.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 35488 36039 . - . ID=gene-RM610_RS09315;Name=RM610_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09315;old_locus_tag=RM610_09350 NZ_JAVRJX010000004.1 Protein Homology CDS 35488 36039 . - 0 ID=cds-WP_311542197.1;Parent=gene-RM610_RS09315;Dbxref=GenBank:WP_311542197.1;Name=WP_311542197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606891.1;locus_tag=RM610_RS09315;product=isochorismatase family protein;protein_id=WP_311542197.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 36308 37099 . + . ID=gene-RM610_RS09320;Name=RM610_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09320;old_locus_tag=RM610_09355 NZ_JAVRJX010000004.1 Protein Homology CDS 36308 37099 . + 0 ID=cds-WP_311542198.1;Parent=gene-RM610_RS09320;Dbxref=GenBank:WP_311542198.1;Name=WP_311542198.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638060.1;locus_tag=RM610_RS09320;product=arylamine N-acetyltransferase family protein;protein_id=WP_311542198.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 37110 37670 . + . ID=gene-RM610_RS09325;Name=RM610_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09325;old_locus_tag=RM610_09360 NZ_JAVRJX010000004.1 Protein Homology CDS 37110 37670 . + 0 ID=cds-WP_105967431.1;Parent=gene-RM610_RS09325;Dbxref=GenBank:WP_105967431.1;Name=WP_105967431.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM610_RS09325;product=TetR/AcrR family transcriptional regulator;protein_id=WP_105967431.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 38051 39280 . + . ID=gene-RM610_RS09330;Name=RM610_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09330;old_locus_tag=RM610_09365 NZ_JAVRJX010000004.1 Protein Homology CDS 38051 39280 . + 0 ID=cds-WP_311542200.1;Parent=gene-RM610_RS09330;Dbxref=GenBank:WP_311542200.1;Name=WP_311542200.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF006143.0;locus_tag=RM610_RS09330;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_311542200.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 39381 40091 . - . ID=gene-RM610_RS09335;Name=RM610_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09335;old_locus_tag=RM610_09370 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 39381 40091 . - 0 ID=cds-WP_311542201.1;Parent=gene-RM610_RS09335;Dbxref=GenBank:WP_311542201.1;Name=WP_311542201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09335;product=hypothetical protein;protein_id=WP_311542201.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 40243 42039 . - . ID=gene-RM610_RS09340;Name=RM610_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09340;old_locus_tag=RM610_09375 NZ_JAVRJX010000004.1 Protein Homology CDS 40243 42039 . - 0 ID=cds-WP_311542202.1;Parent=gene-RM610_RS09340;Dbxref=GenBank:WP_311542202.1;Name=WP_311542202.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379833.1;locus_tag=RM610_RS09340;product=acyltransferase family protein;protein_id=WP_311542202.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 42281 42613 . - . ID=gene-RM610_RS09345;Name=RM610_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09345;old_locus_tag=RM610_09380 NZ_JAVRJX010000004.1 Protein Homology CDS 42281 42613 . - 0 ID=cds-WP_311542284.1;Parent=gene-RM610_RS09345;Dbxref=GenBank:WP_311542284.1;Name=WP_311542284.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004505.1;locus_tag=RM610_RS09345;product=nucleotide pyrophosphohydrolase;protein_id=WP_311542284.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 42609 44348 . - . ID=gene-RM610_RS09350;Name=RM610_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09350;old_locus_tag=RM610_09385 NZ_JAVRJX010000004.1 Protein Homology CDS 42609 44348 . - 0 ID=cds-WP_311542203.1;Parent=gene-RM610_RS09350;Dbxref=GenBank:WP_311542203.1;Name=WP_311542203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473186.1;locus_tag=RM610_RS09350;product=DUF2075 domain-containing protein;protein_id=WP_311542203.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 44942 45493 . + . ID=gene-RM610_RS09355;Name=RM610_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09355;old_locus_tag=RM610_09390 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 44942 45493 . + 0 ID=cds-WP_107389812.1;Parent=gene-RM610_RS09355;Dbxref=GenBank:WP_107389812.1;Name=WP_107389812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09355;product=hypothetical protein;protein_id=WP_107389812.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 45892 47484 . + . ID=gene-RM610_RS09360;Name=RM610_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09360;old_locus_tag=RM610_09395 NZ_JAVRJX010000004.1 Protein Homology CDS 45892 47484 . + 0 ID=cds-WP_107369038.1;Parent=gene-RM610_RS09360;Dbxref=GenBank:WP_107369038.1;Name=WP_107369038.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=RM610_RS09360;product=solute:sodium symporter family transporter;protein_id=WP_107369038.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 47857 48540 . - . ID=gene-RM610_RS09365;Name=RM610_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09365;old_locus_tag=RM610_09400 NZ_JAVRJX010000004.1 Protein Homology CDS 47857 48540 . - 0 ID=cds-WP_105963275.1;Parent=gene-RM610_RS09365;Dbxref=GenBank:WP_105963275.1;Name=WP_105963275.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: protein motif:HMM:NF015277.7;locus_tag=RM610_RS09365;product=acetolactate decarboxylase;protein_id=WP_105963275.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 48878 49816 . + . ID=gene-RM610_RS09370;Name=RM610_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09370;old_locus_tag=RM610_09405 NZ_JAVRJX010000004.1 Protein Homology CDS 48878 49816 . + 0 ID=cds-WP_311542204.1;Parent=gene-RM610_RS09370;Dbxref=GenBank:WP_311542204.1;Name=WP_311542204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.8;locus_tag=RM610_RS09370;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_311542204.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 49898 50836 . - . ID=gene-RM610_RS09375;Name=RM610_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09375;old_locus_tag=RM610_09410 NZ_JAVRJX010000004.1 Protein Homology CDS 49898 50836 . - 0 ID=cds-WP_311542205.1;Parent=gene-RM610_RS09375;Dbxref=GenBank:WP_311542205.1;Name=WP_311542205.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167050.1;locus_tag=RM610_RS09375;product=ketopantoate reductase family protein;protein_id=WP_311542205.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 51021 52454 . + . ID=gene-RM610_RS09380;Name=RM610_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09380;old_locus_tag=RM610_09415 NZ_JAVRJX010000004.1 Protein Homology CDS 51021 52454 . + 0 ID=cds-WP_194746393.1;Parent=gene-RM610_RS09380;Dbxref=GenBank:WP_194746393.1;Name=WP_194746393.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723332.1;locus_tag=RM610_RS09380;product=MDR family MFS transporter;protein_id=WP_194746393.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 52479 53705 . + . ID=gene-RM610_RS09385;Name=RM610_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09385;old_locus_tag=RM610_09420 NZ_JAVRJX010000004.1 Protein Homology CDS 52479 53705 . + 0 ID=cds-WP_105967441.1;Parent=gene-RM610_RS09385;Dbxref=GenBank:WP_105967441.1;Name=WP_105967441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503250.1;locus_tag=RM610_RS09385;product=ArgE/DapE family deacylase;protein_id=WP_105967441.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 54070 55464 . + . ID=gene-RM610_RS09390;Name=RM610_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09390;old_locus_tag=RM610_09425 NZ_JAVRJX010000004.1 Protein Homology CDS 54070 55464 . + 0 ID=cds-WP_107522404.1;Parent=gene-RM610_RS09390;Dbxref=GenBank:WP_107522404.1;Name=WP_107522404.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302424.1;locus_tag=RM610_RS09390;product=MFS transporter;protein_id=WP_107522404.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 55948 56049 . - . ID=gene-RM610_RS09395;Name=RM610_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09395;old_locus_tag=RM610_09430 NZ_JAVRJX010000004.1 Protein Homology CDS 55948 56049 . - 0 ID=cds-WP_107358294.1;Parent=gene-RM610_RS09395;Dbxref=GenBank:WP_107358294.1;Name=WP_107358294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM610_RS09395;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107358294.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 56368 57726 . - . ID=gene-RM610_RS09400;Name=RM610_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09400;old_locus_tag=RM610_09435 NZ_JAVRJX010000004.1 Protein Homology CDS 56368 57726 . - 0 ID=cds-WP_107358296.1;Parent=gene-RM610_RS09400;Dbxref=GenBank:WP_107358296.1;Name=WP_107358296.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549730.1;locus_tag=RM610_RS09400;product=alanine/glycine:cation symporter family protein;protein_id=WP_107358296.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 58119 59714 . + . ID=gene-RM610_RS09405;Name=RM610_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09405;old_locus_tag=RM610_09440 NZ_JAVRJX010000004.1 Protein Homology CDS 58119 59714 . + 0 ID=cds-WP_311542207.1;Parent=gene-RM610_RS09405;Dbxref=GenBank:WP_311542207.1;Name=WP_311542207.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274537.1;locus_tag=RM610_RS09405;product=FGGY-family carbohydrate kinase;protein_id=WP_311542207.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 59853 59981 . - . ID=gene-RM610_RS12135;Name=RM610_RS12135;end_range=59981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12135;partial=true;pseudo=true NZ_JAVRJX010000004.1 Protein Homology CDS 59853 59981 . - 0 ID=cds-RM610_RS12135;Parent=gene-RM610_RS12135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=59981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384111.1;locus_tag=RM610_RS12135;partial=true;product=aggregation-promoting factor C-terminal-like domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 60099 61370 . + . ID=gene-RM610_RS09410;Name=RM610_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09410;old_locus_tag=RM610_09445 NZ_JAVRJX010000004.1 Protein Homology CDS 60099 61370 . + 0 ID=cds-WP_105967445.1;Parent=gene-RM610_RS09410;Dbxref=GenBank:WP_105967445.1;Name=WP_105967445.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF033912.1;locus_tag=RM610_RS09410;product=mechanosensitive ion channel;protein_id=WP_105967445.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 61743 62228 . - . ID=gene-RM610_RS09415;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM610_RS09415;old_locus_tag=RM610_09450 NZ_JAVRJX010000004.1 Protein Homology CDS 61743 62228 . - 0 ID=cds-WP_103158953.1;Parent=gene-RM610_RS09415;Dbxref=GenBank:WP_103158953.1;Name=WP_103158953.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM610_RS09415;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_103158953.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 62603 62839 . - . ID=gene-RM610_RS09420;Name=RM610_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09420;old_locus_tag=RM610_09455 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 62603 62839 . - 0 ID=cds-WP_037577403.1;Parent=gene-RM610_RS09420;Dbxref=GenBank:WP_037577403.1;Name=WP_037577403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09420;product=hypothetical protein;protein_id=WP_037577403.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 63328 64035 . + . ID=gene-RM610_RS09425;Name=RM610_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09425;old_locus_tag=RM610_09460 NZ_JAVRJX010000004.1 Protein Homology CDS 63328 64035 . + 0 ID=cds-WP_107389649.1;Parent=gene-RM610_RS09425;Dbxref=GenBank:WP_107389649.1;Name=WP_107389649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.7;locus_tag=RM610_RS09425;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_107389649.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 64321 66879 . + . ID=gene-RM610_RS09430;Name=RM610_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09430;old_locus_tag=RM610_09465 NZ_JAVRJX010000004.1 Protein Homology CDS 64321 66879 . + 0 ID=cds-WP_311542208.1;Parent=gene-RM610_RS09430;Dbxref=GenBank:WP_311542208.1;Name=WP_311542208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450569.1;locus_tag=RM610_RS09430;product=YfhO family protein;protein_id=WP_311542208.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 67094 67324 . + . ID=gene-RM610_RS09435;Name=RM610_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09435;old_locus_tag=RM610_09470 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 67094 67324 . + 0 ID=cds-WP_107381513.1;Parent=gene-RM610_RS09435;Dbxref=GenBank:WP_107381513.1;Name=WP_107381513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09435;product=hypothetical protein;protein_id=WP_107381513.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 67376 68974 . - . ID=gene-RM610_RS09440;Name=RM610_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09440;old_locus_tag=RM610_09475 NZ_JAVRJX010000004.1 Protein Homology CDS 67376 68974 . - 0 ID=cds-WP_311542209.1;Parent=gene-RM610_RS09440;Dbxref=GenBank:WP_311542209.1;Name=WP_311542209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432872.1;locus_tag=RM610_RS09440;product=gamma-glutamyltransferase;protein_id=WP_311542209.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 68958 69251 . - . ID=gene-RM610_RS09445;Name=RM610_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09445;old_locus_tag=RM610_09480 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 68958 69251 . - 0 ID=cds-WP_105967450.1;Parent=gene-RM610_RS09445;Dbxref=GenBank:WP_105967450.1;Name=WP_105967450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09445;product=hypothetical protein;protein_id=WP_105967450.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 69241 70311 . - . ID=gene-RM610_RS09450;Name=RM610_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09450;old_locus_tag=RM610_09485 NZ_JAVRJX010000004.1 Protein Homology CDS 69241 70311 . - 0 ID=cds-WP_311542210.1;Parent=gene-RM610_RS09450;Dbxref=GenBank:WP_311542210.1;Name=WP_311542210.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302327.1;locus_tag=RM610_RS09450;product=CapA family protein;protein_id=WP_311542210.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 70326 70778 . - . ID=gene-RM610_RS09455;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=RM610_RS09455;old_locus_tag=RM610_09490 NZ_JAVRJX010000004.1 Protein Homology CDS 70326 70778 . - 0 ID=cds-WP_037577418.1;Parent=gene-RM610_RS09455;Dbxref=GenBank:WP_037577418.1;Name=WP_037577418.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480095.1;locus_tag=RM610_RS09455;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WP_037577418.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 70781 71941 . - . ID=gene-RM610_RS09460;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=RM610_RS09460;old_locus_tag=RM610_09495 NZ_JAVRJX010000004.1 Protein Homology CDS 70781 71941 . - 0 ID=cds-WP_119523927.1;Parent=gene-RM610_RS09460;Dbxref=GenBank:WP_119523927.1;Name=WP_119523927.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=RM610_RS09460;product=poly-gamma-glutamate synthase PgsB;protein_id=WP_119523927.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 72617 73543 . - . ID=gene-RM610_RS09465;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=RM610_RS09465;old_locus_tag=RM610_09500 NZ_JAVRJX010000004.1 Protein Homology CDS 72617 73543 . - 0 ID=cds-WP_375712219.1;Parent=gene-RM610_RS09465;Dbxref=GenBank:WP_375712219.1;Name=WP_375712219.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460984.1;locus_tag=RM610_RS09465;product=sphingomyelin phosphodiesterase;protein_id=WP_375712219.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 74152 75627 . + . ID=gene-RM610_RS09470;Name=RM610_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09470;old_locus_tag=RM610_09505 NZ_JAVRJX010000004.1 Protein Homology CDS 74152 75627 . + 0 ID=cds-WP_311542212.1;Parent=gene-RM610_RS09470;Dbxref=GenBank:WP_311542212.1;Name=WP_311542212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168419.1;locus_tag=RM610_RS09470;product=Sau3AI family type II restriction endonuclease;protein_id=WP_311542212.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 75758 76996 . + . ID=gene-RM610_RS09475;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=RM610_RS09475;old_locus_tag=RM610_09510 NZ_JAVRJX010000004.1 Protein Homology CDS 75758 76996 . + 0 ID=cds-WP_311542213.1;Parent=gene-RM610_RS09475;Dbxref=GenBank:WP_311542213.1;Name=WP_311542213.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489500.1;locus_tag=RM610_RS09475;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_311542213.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 77344 78831 . + . ID=gene-RM610_RS09480;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM610_RS09480;old_locus_tag=RM610_09515 NZ_JAVRJX010000004.1 Protein Homology CDS 77344 78831 . + 0 ID=cds-WP_311542214.1;Parent=gene-RM610_RS09480;Dbxref=GenBank:WP_311542214.1;Name=WP_311542214.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=RM610_RS09480;product=cardiolipin synthase;protein_id=WP_311542214.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 79052 79492 . + . ID=gene-RM610_RS09485;Name=RM610_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09485;old_locus_tag=RM610_09520 NZ_JAVRJX010000004.1 Protein Homology CDS 79052 79492 . + 0 ID=cds-WP_157946099.1;Parent=gene-RM610_RS09485;Dbxref=GenBank:WP_157946099.1;Name=WP_157946099.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: protein motif:HMM:NF015925.7;locus_tag=RM610_RS09485;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_157946099.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 79712 81187 . - . ID=gene-RM610_RS09490;Name=RM610_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09490;old_locus_tag=RM610_09525 NZ_JAVRJX010000004.1 Protein Homology CDS 79712 81187 . - 0 ID=cds-WP_105967455.1;Parent=gene-RM610_RS09490;Dbxref=GenBank:WP_105967455.1;Name=WP_105967455.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.7;locus_tag=RM610_RS09490;product=sensor histidine kinase;protein_id=WP_105967455.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 81180 81857 . - . ID=gene-RM610_RS09495;Name=RM610_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09495;old_locus_tag=RM610_09530 NZ_JAVRJX010000004.1 Protein Homology CDS 81180 81857 . - 0 ID=cds-WP_105967456.1;Parent=gene-RM610_RS09495;Dbxref=GenBank:WP_105967456.1;Name=WP_105967456.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478666.1;locus_tag=RM610_RS09495;product=response regulator transcription factor;protein_id=WP_105967456.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 82070 83083 . + . ID=gene-RM610_RS09500;Name=RM610_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09500;old_locus_tag=RM610_09535 NZ_JAVRJX010000004.1 Protein Homology CDS 82070 83083 . + 0 ID=cds-WP_311542215.1;Parent=gene-RM610_RS09500;Dbxref=GenBank:WP_311542215.1;Name=WP_311542215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215650.1;locus_tag=RM610_RS09500;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_311542215.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 83360 83755 . + . ID=gene-RM610_RS09505;Name=RM610_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09505;old_locus_tag=RM610_09540 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 83360 83755 . + 0 ID=cds-WP_107358316.1;Parent=gene-RM610_RS09505;Dbxref=GenBank:WP_107358316.1;Name=WP_107358316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09505;product=hypothetical protein;protein_id=WP_107358316.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 83866 84486 . + . ID=gene-RM610_RS09510;Name=RM610_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09510;old_locus_tag=RM610_09545 NZ_JAVRJX010000004.1 Protein Homology CDS 83866 84486 . + 0 ID=cds-WP_107389631.1;Parent=gene-RM610_RS09510;Dbxref=GenBank:WP_107389631.1;Name=WP_107389631.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999574.1;locus_tag=RM610_RS09510;product=DedA family protein;protein_id=WP_107389631.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 84736 86175 . + . ID=gene-RM610_RS09515;Name=RM610_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09515;old_locus_tag=RM610_09550 NZ_JAVRJX010000004.1 Protein Homology CDS 84736 86175 . + 0 ID=cds-WP_311542216.1;Parent=gene-RM610_RS09515;Dbxref=GenBank:WP_311542216.1;Name=WP_311542216.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506893.1;locus_tag=RM610_RS09515;product=alkaline phosphatase;protein_id=WP_311542216.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 86439 87866 . + . ID=gene-RM610_RS09520;Name=RM610_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09520;old_locus_tag=RM610_09555 NZ_JAVRJX010000004.1 Protein Homology CDS 86439 87866 . + 0 ID=cds-WP_311542217.1;Parent=gene-RM610_RS09520;Dbxref=GenBank:WP_311542217.1;Name=WP_311542217.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168428.1;locus_tag=RM610_RS09520;product=alkaline phosphatase;protein_id=WP_311542217.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 88007 88714 . - . ID=gene-RM610_RS09525;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=RM610_RS09525;old_locus_tag=RM610_09560 NZ_JAVRJX010000004.1 Protein Homology CDS 88007 88714 . - 0 ID=cds-WP_107358323.1;Parent=gene-RM610_RS09525;Dbxref=GenBank:WP_107358323.1;Name=WP_107358323.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=RM610_RS09525;product=acetolactate decarboxylase;protein_id=WP_107358323.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 88852 89244 . + . ID=gene-RM610_RS09530;Name=RM610_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09530;old_locus_tag=RM610_09565 NZ_JAVRJX010000004.1 Protein Homology CDS 88852 89244 . + 0 ID=cds-WP_107358324.1;Parent=gene-RM610_RS09530;Dbxref=GenBank:WP_107358324.1;Name=WP_107358324.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470196.1;locus_tag=RM610_RS09530;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_107358324.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 89247 92117 . + . ID=gene-RM610_RS09535;Name=RM610_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09535;old_locus_tag=RM610_09570 NZ_JAVRJX010000004.1 Protein Homology CDS 89247 92117 . + 0 ID=cds-WP_311542218.1;Parent=gene-RM610_RS09535;Dbxref=GenBank:WP_311542218.1;Name=WP_311542218.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=RM610_RS09535;product=DEAD/DEAH box helicase;protein_id=WP_311542218.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 92303 92986 . + . ID=gene-RM610_RS09540;Name=RM610_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09540;old_locus_tag=RM610_09575 NZ_JAVRJX010000004.1 Protein Homology CDS 92303 92986 . + 0 ID=cds-WP_311542219.1;Parent=gene-RM610_RS09540;Dbxref=GenBank:WP_311542219.1;Name=WP_311542219.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501440.1;locus_tag=RM610_RS09540;product=flavin reductase family protein;protein_id=WP_311542219.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 93118 93597 . + . ID=gene-RM610_RS09545;Name=RM610_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09545;old_locus_tag=RM610_09580 NZ_JAVRJX010000004.1 Protein Homology CDS 93118 93597 . + 0 ID=cds-WP_311542220.1;Parent=gene-RM610_RS09545;Dbxref=GenBank:WP_311542220.1;Name=WP_311542220.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024917.7;locus_tag=RM610_RS09545;product=GNAT family N-acetyltransferase;protein_id=WP_311542220.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 93633 93872 . + . ID=gene-RM610_RS09550;Name=RM610_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09550;old_locus_tag=RM610_09585 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 93633 93872 . + 0 ID=cds-WP_105967466.1;Parent=gene-RM610_RS09550;Dbxref=GenBank:WP_105967466.1;Name=WP_105967466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09550;product=hypothetical protein;protein_id=WP_105967466.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 93941 94087 . - . ID=gene-RM610_RS09555;Name=RM610_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09555;old_locus_tag=RM610_09590 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 93941 94087 . - 0 ID=cds-WP_157948376.1;Parent=gene-RM610_RS09555;Dbxref=GenBank:WP_157948376.1;Name=WP_157948376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09555;product=hypothetical protein;protein_id=WP_157948376.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 94188 94382 . - . ID=gene-RM610_RS09560;Name=RM610_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09560;old_locus_tag=RM610_09595 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 94188 94382 . - 0 ID=cds-WP_105967467.1;Parent=gene-RM610_RS09560;Dbxref=GenBank:WP_105967467.1;Name=WP_105967467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09560;product=hypothetical protein;protein_id=WP_105967467.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 94865 96481 . + . ID=gene-RM610_RS09565;Name=RM610_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09565;old_locus_tag=RM610_09600 NZ_JAVRJX010000004.1 Protein Homology CDS 94865 96481 . + 0 ID=cds-WP_232194829.1;Parent=gene-RM610_RS09565;Dbxref=GenBank:WP_232194829.1;Name=WP_232194829.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452081.1;locus_tag=RM610_RS09565;product=BCCT family transporter;protein_id=WP_232194829.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 96701 97261 . - . ID=gene-RM610_RS09570;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=RM610_RS09570;old_locus_tag=RM610_09605 NZ_JAVRJX010000004.1 Protein Homology CDS 96701 97261 . - 0 ID=cds-WP_105986795.1;Parent=gene-RM610_RS09570;Dbxref=GenBank:WP_105986795.1;Name=WP_105986795.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198602.1;locus_tag=RM610_RS09570;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_105986795.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 97472 98971 . + . ID=gene-RM610_RS09575;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=RM610_RS09575;old_locus_tag=RM610_09610 NZ_JAVRJX010000004.1 Protein Homology CDS 97472 98971 . + 0 ID=cds-WP_311542221.1;Parent=gene-RM610_RS09575;Dbxref=GenBank:WP_311542221.1;Name=WP_311542221.1;Ontology_term=GO:0031456,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167076.1;locus_tag=RM610_RS09575;product=betaine-aldehyde dehydrogenase;protein_id=WP_311542221.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 98993 100687 . + . ID=gene-RM610_RS09580;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=RM610_RS09580;old_locus_tag=RM610_09615 NZ_JAVRJX010000004.1 Protein Homology CDS 98993 100687 . + 0 ID=cds-WP_107381321.1;Parent=gene-RM610_RS09580;Dbxref=GenBank:WP_107381321.1;Name=WP_107381321.1;Ontology_term=GO:0031456,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=RM610_RS09580;product=choline dehydrogenase;protein_id=WP_107381321.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 101464 102111 . + . ID=gene-RM610_RS09585;Name=RM610_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09585;old_locus_tag=RM610_09620 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 101464 102111 . + 0 ID=cds-WP_311542222.1;Parent=gene-RM610_RS09585;Dbxref=GenBank:WP_311542222.1;Name=WP_311542222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09585;product=hypothetical protein;protein_id=WP_311542222.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 102136 102585 . + . ID=gene-RM610_RS09590;Name=RM610_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09590;old_locus_tag=RM610_09625 NZ_JAVRJX010000004.1 Protein Homology CDS 102136 102585 . + 0 ID=cds-WP_107389605.1;Parent=gene-RM610_RS09590;Dbxref=GenBank:WP_107389605.1;Name=WP_107389605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899968.1;locus_tag=RM610_RS09590;product=DUF1801 domain-containing protein;protein_id=WP_107389605.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 102792 103841 . + . ID=gene-RM610_RS09595;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM610_RS09595;old_locus_tag=RM610_09630 NZ_JAVRJX010000004.1 Protein Homology CDS 102792 103841 . + 0 ID=cds-WP_311542285.1;Parent=gene-RM610_RS09595;Dbxref=GenBank:WP_311542285.1;Name=WP_311542285.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506553.1;locus_tag=RM610_RS09595;product=ornithine carbamoyltransferase;protein_id=WP_311542285.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 103955 104584 . - . ID=gene-RM610_RS09600;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=RM610_RS09600;old_locus_tag=RM610_09635 NZ_JAVRJX010000004.1 Protein Homology CDS 103955 104584 . - 0 ID=cds-WP_311542223.1;Parent=gene-RM610_RS09600;Dbxref=GenBank:WP_311542223.1;Name=WP_311542223.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=RM610_RS09600;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_311542223.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 104581 105339 . - . ID=gene-RM610_RS09605;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=RM610_RS09605;old_locus_tag=RM610_09640 NZ_JAVRJX010000004.1 Protein Homology CDS 104581 105339 . - 0 ID=cds-WP_311542224.1;Parent=gene-RM610_RS09605;Dbxref=GenBank:WP_311542224.1;Name=WP_311542224.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592599.1;locus_tag=RM610_RS09605;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_311542224.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 105336 106040 . - . ID=gene-RM610_RS09610;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=RM610_RS09610;old_locus_tag=RM610_09645 NZ_JAVRJX010000004.1 Protein Homology CDS 105336 106040 . - 0 ID=cds-WP_311542225.1;Parent=gene-RM610_RS09610;Dbxref=GenBank:WP_311542225.1;Name=WP_311542225.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=RM610_RS09610;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_311542225.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 106033 106608 . - . ID=gene-RM610_RS09615;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=RM610_RS09615;old_locus_tag=RM610_09650 NZ_JAVRJX010000004.1 Protein Homology CDS 106033 106608 . - 0 ID=cds-WP_107389608.1;Parent=gene-RM610_RS09615;Dbxref=GenBank:WP_107389608.1;Name=WP_107389608.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=RM610_RS09615;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_107389608.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 106605 107180 . - . ID=gene-RM610_RS09620;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=RM610_RS09620;old_locus_tag=RM610_09655 NZ_JAVRJX010000004.1 Protein Homology CDS 106605 107180 . - 0 ID=cds-WP_311542226.1;Parent=gene-RM610_RS09620;Dbxref=GenBank:WP_311542226.1;Name=WP_311542226.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640272.1;locus_tag=RM610_RS09620;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_311542226.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 107164 108174 . - . ID=gene-RM610_RS09625;Name=RM610_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09625;old_locus_tag=RM610_09660 NZ_JAVRJX010000004.1 Protein Homology CDS 107164 108174 . - 0 ID=cds-WP_311542227.1;Parent=gene-RM610_RS09625;Dbxref=GenBank:WP_311542227.1;Name=WP_311542227.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=RM610_RS09625;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_311542227.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 108189 109430 . - . ID=gene-RM610_RS09630;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=RM610_RS09630;old_locus_tag=RM610_09665 NZ_JAVRJX010000004.1 Protein Homology CDS 108189 109430 . - 0 ID=cds-WP_107389610.1;Parent=gene-RM610_RS09630;Dbxref=GenBank:WP_107389610.1;Name=WP_107389610.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612900.1;locus_tag=RM610_RS09630;product=histidinol dehydrogenase;protein_id=WP_107389610.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 109420 110034 . - . ID=gene-RM610_RS09635;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=RM610_RS09635;old_locus_tag=RM610_09670 NZ_JAVRJX010000004.1 Protein Homology CDS 109420 110034 . - 0 ID=cds-WP_311542228.1;Parent=gene-RM610_RS09635;Dbxref=GenBank:WP_311542228.1;Name=WP_311542228.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=RM610_RS09635;product=ATP phosphoribosyltransferase;protein_id=WP_311542228.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 110031 110858 . - . ID=gene-RM610_RS09640;Name=RM610_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09640;old_locus_tag=RM610_09675 NZ_JAVRJX010000004.1 Protein Homology CDS 110031 110858 . - 0 ID=cds-WP_311542229.1;Parent=gene-RM610_RS09640;Dbxref=GenBank:WP_311542229.1;Name=WP_311542229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=RM610_RS09640;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_311542229.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 111101 111763 . + . ID=gene-RM610_RS09645;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM610_RS09645;old_locus_tag=RM610_09680 NZ_JAVRJX010000004.1 Protein Homology CDS 111101 111763 . + 0 ID=cds-WP_145399913.1;Parent=gene-RM610_RS09645;Dbxref=GenBank:WP_145399913.1;Name=WP_145399913.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM610_RS09645;product=deoxyribose-phosphate aldolase;protein_id=WP_145399913.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 111799 112974 . + . ID=gene-RM610_RS09650;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM610_RS09650;old_locus_tag=RM610_09685 NZ_JAVRJX010000004.1 Protein Homology CDS 111799 112974 . + 0 ID=cds-WP_311542230.1;Parent=gene-RM610_RS09650;Dbxref=GenBank:WP_311542230.1;Name=WP_311542230.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435879.1;locus_tag=RM610_RS09650;product=phosphopentomutase;protein_id=WP_311542230.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 113032 113364 . - . ID=gene-RM610_RS09655;Name=RM610_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09655;old_locus_tag=RM610_09690 NZ_JAVRJX010000004.1 Protein Homology CDS 113032 113364 . - 0 ID=cds-WP_107358357.1;Parent=gene-RM610_RS09655;Dbxref=GenBank:WP_107358357.1;Name=WP_107358357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495128.1;locus_tag=RM610_RS09655;product=hypothetical protein;protein_id=WP_107358357.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 113545 113823 . + . ID=gene-RM610_RS09660;Name=RM610_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09660;old_locus_tag=RM610_09695 NZ_JAVRJX010000004.1 Protein Homology CDS 113545 113823 . + 0 ID=cds-WP_107364306.1;Parent=gene-RM610_RS09660;Dbxref=GenBank:WP_107364306.1;Name=WP_107364306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166814.1;locus_tag=RM610_RS09660;product=hypothetical protein;protein_id=WP_107364306.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 114082 115443 . - . ID=gene-RM610_RS09665;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=RM610_RS09665;old_locus_tag=RM610_09700 NZ_JAVRJX010000004.1 Protein Homology CDS 114082 115443 . - 0 ID=cds-WP_105967486.1;Parent=gene-RM610_RS09665;Dbxref=GenBank:WP_105967486.1;Name=WP_105967486.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016913109.1;locus_tag=RM610_RS09665;product=glycerol-3-phosphate transporter;protein_id=WP_105967486.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 115704 116312 . - . ID=gene-RM610_RS09670;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=RM610_RS09670;old_locus_tag=RM610_09705 NZ_JAVRJX010000004.1 Protein Homology CDS 115704 116312 . - 0 ID=cds-WP_037576096.1;Parent=gene-RM610_RS09670;Dbxref=GenBank:WP_037576096.1;Name=WP_037576096.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438013.1;locus_tag=RM610_RS09670;product=adenylyl-sulfate kinase;protein_id=WP_037576096.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 116328 117503 . - . ID=gene-RM610_RS09675;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=RM610_RS09675;old_locus_tag=RM610_09710 NZ_JAVRJX010000004.1 Protein Homology CDS 116328 117503 . - 0 ID=cds-WP_311542231.1;Parent=gene-RM610_RS09675;Dbxref=GenBank:WP_311542231.1;Name=WP_311542231.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469812.1;locus_tag=RM610_RS09675;product=sulfate adenylyltransferase;protein_id=WP_311542231.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 117518 118414 . - . ID=gene-RM610_RS09680;Name=RM610_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09680;old_locus_tag=RM610_09715 NZ_JAVRJX010000004.1 Protein Homology CDS 117518 118414 . - 0 ID=cds-WP_107381388.1;Parent=gene-RM610_RS09680;Dbxref=GenBank:WP_107381388.1;Name=WP_107381388.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303994.1;locus_tag=RM610_RS09680;product=sulfite exporter TauE/SafE family protein;protein_id=WP_107381388.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 118452 119219 . - . ID=gene-RM610_RS09685;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM610_RS09685;old_locus_tag=RM610_09720 NZ_JAVRJX010000004.1 Protein Homology CDS 118452 119219 . - 0 ID=cds-WP_107381389.1;Parent=gene-RM610_RS09685;Dbxref=GenBank:WP_107381389.1;Name=WP_107381389.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449255.1;locus_tag=RM610_RS09685;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_107381389.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 119252 120982 . - . ID=gene-RM610_RS09690;Name=RM610_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09690;old_locus_tag=RM610_09725 NZ_JAVRJX010000004.1 Protein Homology CDS 119252 120982 . - 0 ID=cds-WP_311542232.1;Parent=gene-RM610_RS09690;Dbxref=GenBank:WP_311542232.1;Name=WP_311542232.1;Ontology_term=GO:0008652,GO:0004783,GO:0051536;gbkey=CDS;go_function=sulfite reductase (NADPH) activity|0004783||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472639.1;locus_tag=RM610_RS09690;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=WP_311542232.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 121007 122875 . - . ID=gene-RM610_RS09695;Name=RM610_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09695;old_locus_tag=RM610_09730 NZ_JAVRJX010000004.1 Protein Homology CDS 121007 122875 . - 0 ID=cds-WP_105967492.1;Parent=gene-RM610_RS09695;Dbxref=GenBank:WP_105967492.1;Name=WP_105967492.1;Ontology_term=GO:0006790,GO:0019344,GO:0004783,GO:0010181,GO:0050660,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfur compound metabolic process|0006790||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=RM610_RS09695;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_105967492.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 122954 123676 . - . ID=gene-RM610_RS09700;Name=RM610_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09700;old_locus_tag=RM610_09735 NZ_JAVRJX010000004.1 Protein Homology CDS 122954 123676 . - 0 ID=cds-WP_105967493.1;Parent=gene-RM610_RS09700;Dbxref=GenBank:WP_105967493.1;Name=WP_105967493.1;Ontology_term=GO:0000103,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509058.1;locus_tag=RM610_RS09700;product=phosphoadenylyl-sulfate reductase;protein_id=WP_105967493.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 124032 125000 . + . ID=gene-RM610_RS09705;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=RM610_RS09705;old_locus_tag=RM610_09740 NZ_JAVRJX010000004.1 Protein Homology CDS 124032 125000 . + 0 ID=cds-WP_311542233.1;Parent=gene-RM610_RS09705;Dbxref=GenBank:WP_311542233.1;Name=WP_311542233.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433253.1;locus_tag=RM610_RS09705;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_311542233.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 125014 125589 . + . ID=gene-RM610_RS09710;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=RM610_RS09710;old_locus_tag=RM610_09745 NZ_JAVRJX010000004.1 Protein Homology CDS 125014 125589 . + 0 ID=cds-WP_107369682.1;Parent=gene-RM610_RS09710;Dbxref=GenBank:WP_107369682.1;Name=WP_107369682.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464360.1;locus_tag=RM610_RS09710;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_107369682.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 125591 125956 . + . ID=gene-RM610_RS09715;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=RM610_RS09715;old_locus_tag=RM610_09750 NZ_JAVRJX010000004.1 Protein Homology CDS 125591 125956 . + 0 ID=cds-WP_311542234.1;Parent=gene-RM610_RS09715;Dbxref=GenBank:WP_311542234.1;Name=WP_311542234.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612912.1;locus_tag=RM610_RS09715;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_311542234.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 126189 127430 . + . ID=gene-RM610_RS09720;Name=RM610_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09720;old_locus_tag=RM610_09755 NZ_JAVRJX010000004.1 Protein Homology CDS 126189 127430 . + 0 ID=cds-WP_311542235.1;Parent=gene-RM610_RS09720;Dbxref=GenBank:WP_311542235.1;Name=WP_311542235.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274967.1;locus_tag=RM610_RS09720;product=aminoacyltransferase;protein_id=WP_311542235.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 127932 128282 . - . ID=gene-RM610_RS09725;Name=RM610_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09725;old_locus_tag=RM610_09760 NZ_JAVRJX010000004.1 Protein Homology CDS 127932 128282 . - 0 ID=cds-WP_107381588.1;Parent=gene-RM610_RS09725;Dbxref=GenBank:WP_107381588.1;Name=WP_107381588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426058.1;locus_tag=RM610_RS09725;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_107381588.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 128532 129911 . + . ID=gene-RM610_RS09730;Name=RM610_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09730;old_locus_tag=RM610_09765 NZ_JAVRJX010000004.1 Protein Homology CDS 128532 129911 . + 0 ID=cds-WP_311542236.1;Parent=gene-RM610_RS09730;Dbxref=GenBank:WP_311542236.1;Name=WP_311542236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=RM610_RS09730;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_311542236.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 129938 130234 . + . ID=gene-RM610_RS09735;Name=RM610_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09735;old_locus_tag=RM610_09770 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 129938 130234 . + 0 ID=cds-WP_037576050.1;Parent=gene-RM610_RS09735;Dbxref=GenBank:WP_037576050.1;Name=WP_037576050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09735;product=hypothetical protein;protein_id=WP_037576050.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 130587 131543 . + . ID=gene-RM610_RS09740;Name=RM610_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09740;old_locus_tag=RM610_09775 NZ_JAVRJX010000004.1 Protein Homology CDS 130587 131543 . + 0 ID=cds-WP_311542237.1;Parent=gene-RM610_RS09740;Dbxref=GenBank:WP_311542237.1;Name=WP_311542237.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=RM610_RS09740;product=alpha/beta hydrolase;protein_id=WP_311542237.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 131575 132333 . + . ID=gene-RM610_RS09745;Name=RM610_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09745;old_locus_tag=RM610_09780 NZ_JAVRJX010000004.1 Protein Homology CDS 131575 132333 . + 0 ID=cds-WP_311542238.1;Parent=gene-RM610_RS09745;Dbxref=GenBank:WP_311542238.1;Name=WP_311542238.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.7;locus_tag=RM610_RS09745;product=MerR family transcriptional regulator;protein_id=WP_311542238.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 132500 134473 . + . ID=gene-RM610_RS09750;Name=RM610_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09750;old_locus_tag=RM610_09785 NZ_JAVRJX010000004.1 Protein Homology CDS 132500 134473 . + 0 ID=cds-WP_311542239.1;Parent=gene-RM610_RS09750;Dbxref=GenBank:WP_311542239.1;Name=WP_311542239.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167493.1;locus_tag=RM610_RS09750;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_311542239.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 134541 135872 . - . ID=gene-RM610_RS09755;Name=RM610_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09755;old_locus_tag=RM610_09790 NZ_JAVRJX010000004.1 Protein Homology CDS 134541 135872 . - 0 ID=cds-WP_311542240.1;Parent=gene-RM610_RS09755;Dbxref=GenBank:WP_311542240.1;Name=WP_311542240.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: protein motif:HMM:NF013954.7;locus_tag=RM610_RS09755;product=glucosaminidase domain-containing protein;protein_id=WP_311542240.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 136067 137815 . + . ID=gene-RM610_RS09760;Name=RM610_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09760;old_locus_tag=RM610_09795 NZ_JAVRJX010000004.1 Protein Homology CDS 136067 137815 . + 0 ID=cds-WP_311542241.1;Parent=gene-RM610_RS09760;Dbxref=GenBank:WP_311542241.1;Name=WP_311542241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM610_RS09760;product=YhgE/Pip family protein;protein_id=WP_311542241.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 137868 138215 . + . ID=gene-RM610_RS09765;Name=RM610_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09765;old_locus_tag=RM610_09800 NZ_JAVRJX010000004.1 Protein Homology CDS 137868 138215 . + 0 ID=cds-WP_107359475.1;Parent=gene-RM610_RS09765;Dbxref=GenBank:WP_107359475.1;Name=WP_107359475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016839079.1;locus_tag=RM610_RS09765;product=DUF2200 domain-containing protein;protein_id=WP_107359475.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 138338 138862 . - . ID=gene-RM610_RS09770;Name=RM610_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09770;old_locus_tag=RM610_09805 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 138338 138862 . - 0 ID=cds-WP_107381052.1;Parent=gene-RM610_RS09770;Dbxref=GenBank:WP_107381052.1;Name=WP_107381052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09770;product=hypothetical protein;protein_id=WP_107381052.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 139073 139291 . - . ID=gene-RM610_RS09775;Name=RM610_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09775;old_locus_tag=RM610_09810 NZ_JAVRJX010000004.1 Protein Homology CDS 139073 139291 . - 0 ID=cds-WP_037576023.1;Parent=gene-RM610_RS09775;Dbxref=GenBank:WP_037576023.1;Name=WP_037576023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018554.7;locus_tag=RM610_RS09775;product=YozE family protein;protein_id=WP_037576023.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 139510 140232 . + . ID=gene-RM610_RS09780;Name=RM610_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09780;old_locus_tag=RM610_09815 NZ_JAVRJX010000004.1 Protein Homology CDS 139510 140232 . + 0 ID=cds-WP_311542242.1;Parent=gene-RM610_RS09780;Dbxref=GenBank:WP_311542242.1;Name=WP_311542242.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501364.1;locus_tag=RM610_RS09780;product=epoxyqueuosine reductase QueH;protein_id=WP_311542242.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 140368 141855 . + . ID=gene-RM610_RS09785;Name=RM610_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09785;old_locus_tag=RM610_09820 NZ_JAVRJX010000004.1 Protein Homology CDS 140368 141855 . + 0 ID=cds-WP_311542243.1;Parent=gene-RM610_RS09785;Dbxref=GenBank:WP_311542243.1;Name=WP_311542243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=RM610_RS09785;product=ABC transporter substrate-binding protein;protein_id=WP_311542243.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 141845 142831 . + . ID=gene-RM610_RS09790;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=RM610_RS09790;old_locus_tag=RM610_09825 NZ_JAVRJX010000004.1 Protein Homology CDS 141845 142831 . + 0 ID=cds-WP_311542244.1;Parent=gene-RM610_RS09790;Dbxref=GenBank:WP_311542244.1;Name=WP_311542244.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636982.1;locus_tag=RM610_RS09790;product=nickel ABC transporter permease;protein_id=WP_311542244.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 142828 143631 . + . ID=gene-RM610_RS09795;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=RM610_RS09795;old_locus_tag=RM610_09830 NZ_JAVRJX010000004.1 Protein Homology CDS 142828 143631 . + 0 ID=cds-WP_311542245.1;Parent=gene-RM610_RS09795;Dbxref=GenBank:WP_311542245.1;Name=WP_311542245.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302255.1;locus_tag=RM610_RS09795;product=nickel transporter permease;protein_id=WP_311542245.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 143633 144403 . + . ID=gene-RM610_RS09800;Name=RM610_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09800;old_locus_tag=RM610_09835 NZ_JAVRJX010000004.1 Protein Homology CDS 143633 144403 . + 0 ID=cds-WP_241954721.1;Parent=gene-RM610_RS09800;Dbxref=GenBank:WP_241954721.1;Name=WP_241954721.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=RM610_RS09800;product=ATP-binding cassette domain-containing protein;protein_id=WP_241954721.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 144400 145089 . + . ID=gene-RM610_RS09805;Name=RM610_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09805;old_locus_tag=RM610_09840 NZ_JAVRJX010000004.1 Protein Homology CDS 144400 145089 . + 0 ID=cds-WP_311542246.1;Parent=gene-RM610_RS09805;Dbxref=GenBank:WP_311542246.1;Name=WP_311542246.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM610_RS09805;product=ABC transporter ATP-binding protein;protein_id=WP_311542246.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 145203 147368 . - . ID=gene-RM610_RS09810;Name=RM610_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09810;old_locus_tag=RM610_09845 NZ_JAVRJX010000004.1 Protein Homology CDS 145203 147368 . - 0 ID=cds-WP_107359483.1;Parent=gene-RM610_RS09810;Dbxref=GenBank:WP_107359483.1;Name=WP_107359483.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447216.1;locus_tag=RM610_RS09810;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_107359483.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 147565 149067 . + . ID=gene-RM610_RS09815;Name=RM610_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09815;old_locus_tag=RM610_09850 NZ_JAVRJX010000004.1 Protein Homology CDS 147565 149067 . + 0 ID=cds-WP_182472267.1;Parent=gene-RM610_RS09815;Dbxref=GenBank:WP_182472267.1;Name=WP_182472267.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=RM610_RS09815;product=glycosyltransferase;protein_id=WP_182472267.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 149366 151237 . + . ID=gene-RM610_RS09820;Name=RM610_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09820;old_locus_tag=RM610_09855 NZ_JAVRJX010000004.1 Protein Homology CDS 149366 151237 . + 0 ID=cds-WP_311542247.1;Parent=gene-RM610_RS09820;Dbxref=GenBank:WP_311542247.1;Name=WP_311542247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=RM610_RS09820;product=DUF5776 domain-containing protein;protein_id=WP_311542247.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 151256 152737 . + . ID=gene-RM610_RS09825;Name=RM610_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09825;old_locus_tag=RM610_09860 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 151256 152737 . + 0 ID=cds-WP_311542249.1;Parent=gene-RM610_RS09825;Dbxref=GenBank:WP_311542249.1;Name=WP_311542249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09825;product=DUF6056 family protein;protein_id=WP_311542249.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 152822 154291 . - . ID=gene-RM610_RS09830;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=RM610_RS09830;old_locus_tag=RM610_09865 NZ_JAVRJX010000004.1 Protein Homology CDS 152822 154291 . - 0 ID=cds-WP_037576002.1;Parent=gene-RM610_RS09830;Dbxref=GenBank:WP_037576002.1;Name=WP_037576002.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471199.1;locus_tag=RM610_RS09830;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_037576002.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 154675 156834 . + . ID=gene-RM610_RS09835;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=RM610_RS09835;old_locus_tag=RM610_09870 NZ_JAVRJX010000004.1 Protein Homology CDS 154675 156834 . + 0 ID=cds-WP_311542250.1;Parent=gene-RM610_RS09835;Dbxref=GenBank:WP_311542250.1;Name=WP_311542250.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: protein motif:HMM:NF047351.1;locus_tag=RM610_RS09835;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_311542250.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 156878 157054 . - . ID=gene-RM610_RS09840;Name=RM610_RS09840;end_range=157054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS09840;old_locus_tag=RM610_09875;partial=true;pseudo=true NZ_JAVRJX010000004.1 Protein Homology CDS 156878 157054 . - 0 ID=cds-RM610_RS09840;Parent=gene-RM610_RS09840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=157054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729285.1;locus_tag=RM610_RS09840;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 157086 157184 . + . ID=gene-RM610_RS12080;Name=RM610_RS12080;end_range=157184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12080;partial=true;pseudo=true;start_range=.,157086 NZ_JAVRJX010000004.1 Protein Homology CDS 157086 157184 . + 0 ID=cds-RM610_RS12080;Parent=gene-RM610_RS12080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=157184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813127.1;locus_tag=RM610_RS12080;partial=true;product=DUF536 domain-containing protein;pseudo=true;start_range=.,157086;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 157183 157501 . - . ID=gene-RM610_RS09845;Name=RM610_RS09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS09845;old_locus_tag=RM610_09880;partial=true;pseudo=true;start_range=.,157183 NZ_JAVRJX010000004.1 Protein Homology CDS 157183 157501 . - 0 ID=cds-RM610_RS09845;Parent=gene-RM610_RS09845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690624.1;locus_tag=RM610_RS09845;partial=true;product=recombinase family protein;pseudo=true;start_range=.,157183;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 157660 157752 . - . ID=gene-RM610_RS09850;Name=RM610_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09850;old_locus_tag=RM610_09885 NZ_JAVRJX010000004.1 Protein Homology CDS 157660 157752 . - 0 ID=cds-WP_001791613.1;Parent=gene-RM610_RS09850;Dbxref=GenBank:WP_001791613.1;Name=WP_001791613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495832.1;locus_tag=RM610_RS09850;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_001791613.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 158239 158904 . - . ID=gene-RM610_RS09855;Name=RM610_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09855;old_locus_tag=RM610_09890 NZ_JAVRJX010000004.1 Protein Homology CDS 158239 158904 . - 0 ID=cds-WP_107369716.1;Parent=gene-RM610_RS09855;Dbxref=GenBank:WP_107369716.1;Name=WP_107369716.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479812.1;locus_tag=RM610_RS09855;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_107369716.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 159061 159924 . + . ID=gene-RM610_RS09860;Name=RM610_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09860;old_locus_tag=RM610_09895 NZ_JAVRJX010000004.1 Protein Homology CDS 159061 159924 . + 0 ID=cds-WP_311542252.1;Parent=gene-RM610_RS09860;Dbxref=GenBank:WP_311542252.1;Name=WP_311542252.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=RM610_RS09860;product=fructosamine kinase family protein;protein_id=WP_311542252.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 159948 160322 . + . ID=gene-RM610_RS09865;Name=RM610_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09865;old_locus_tag=RM610_09900 NZ_JAVRJX010000004.1 Protein Homology CDS 159948 160322 . + 0 ID=cds-WP_311542253.1;Parent=gene-RM610_RS09865;Dbxref=GenBank:WP_311542253.1;Name=WP_311542253.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019468.7;locus_tag=RM610_RS09865;product=DUF1648 domain-containing protein;protein_id=WP_311542253.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 160417 161016 . - . ID=gene-RM610_RS09870;Name=RM610_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09870;old_locus_tag=RM610_09905 NZ_JAVRJX010000004.1 Protein Homology CDS 160417 161016 . - 0 ID=cds-WP_311542254.1;Parent=gene-RM610_RS09870;Dbxref=GenBank:WP_311542254.1;Name=WP_311542254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016764.7;locus_tag=RM610_RS09870;product=YIP1 family protein;protein_id=WP_311542254.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 161274 162314 . + . ID=gene-RM610_RS09875;Name=RM610_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09875;old_locus_tag=RM610_09910 NZ_JAVRJX010000004.1 Protein Homology CDS 161274 162314 . + 0 ID=cds-WP_165885952.1;Parent=gene-RM610_RS09875;Dbxref=GenBank:WP_165885952.1;Name=WP_165885952.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451536.1;locus_tag=RM610_RS09875;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_165885952.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 162311 162997 . + . ID=gene-RM610_RS09880;Name=RM610_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09880;old_locus_tag=RM610_09915 NZ_JAVRJX010000004.1 Protein Homology CDS 162311 162997 . + 0 ID=cds-WP_037575988.1;Parent=gene-RM610_RS09880;Dbxref=GenBank:WP_037575988.1;Name=WP_037575988.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466413.1;locus_tag=RM610_RS09880;product=ABC transporter ATP-binding protein;protein_id=WP_037575988.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 162990 164177 . + . ID=gene-RM610_RS09885;Name=RM610_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09885;old_locus_tag=RM610_09920 NZ_JAVRJX010000004.1 Protein Homology CDS 162990 164177 . + 0 ID=cds-WP_311542255.1;Parent=gene-RM610_RS09885;Dbxref=GenBank:WP_311542255.1;Name=WP_311542255.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=RM610_RS09885;product=ABC transporter permease;protein_id=WP_311542255.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 164411 165618 . + . ID=gene-RM610_RS09890;Name=RM610_RS09890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS09890;old_locus_tag=RM610_09925;pseudo=true NZ_JAVRJX010000004.1 Protein Homology CDS 164411 165618 . + 0 ID=cds-RM610_RS09890;Parent=gene-RM610_RS09890;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442083.1;locus_tag=RM610_RS09890;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 165773 165907 . + . ID=gene-RM610_RS09895;Name=RM610_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09895;old_locus_tag=RM610_09930 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 165773 165907 . + 0 ID=cds-WP_311542256.1;Parent=gene-RM610_RS09895;Dbxref=GenBank:WP_311542256.1;Name=WP_311542256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09895;product=hypothetical protein;protein_id=WP_311542256.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 165934 166602 . + . ID=gene-RM610_RS09900;Name=RM610_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09900;old_locus_tag=RM610_09935 NZ_JAVRJX010000004.1 Protein Homology CDS 165934 166602 . + 0 ID=cds-WP_107369709.1;Parent=gene-RM610_RS09900;Dbxref=GenBank:WP_107369709.1;Name=WP_107369709.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.7;locus_tag=RM610_RS09900;product=response regulator transcription factor;protein_id=WP_107369709.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 166599 167750 . + . ID=gene-RM610_RS09905;Name=RM610_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09905;old_locus_tag=RM610_09940 NZ_JAVRJX010000004.1 Protein Homology CDS 166599 167750 . + 0 ID=cds-WP_311542257.1;Parent=gene-RM610_RS09905;Dbxref=GenBank:WP_311542257.1;Name=WP_311542257.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636325.1;locus_tag=RM610_RS09905;product=sensor histidine kinase;protein_id=WP_311542257.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 167819 168235 . + . ID=gene-RM610_RS09910;Name=RM610_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09910;old_locus_tag=RM610_09945 NZ_JAVRJX010000004.1 Protein Homology CDS 167819 168235 . + 0 ID=cds-WP_037575979.1;Parent=gene-RM610_RS09910;Dbxref=GenBank:WP_037575979.1;Name=WP_037575979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931400.1;locus_tag=RM610_RS09910;product=DUF2231 domain-containing protein;protein_id=WP_037575979.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 168250 169185 . + . ID=gene-RM610_RS09915;Name=RM610_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09915;old_locus_tag=RM610_09950 NZ_JAVRJX010000004.1 Protein Homology CDS 168250 169185 . + 0 ID=cds-WP_105996969.1;Parent=gene-RM610_RS09915;Dbxref=GenBank:WP_105996969.1;Name=WP_105996969.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=RM610_RS09915;product=cation diffusion facilitator family transporter;protein_id=WP_105996969.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 169494 170171 . + . ID=gene-RM610_RS09920;Name=RM610_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09920;old_locus_tag=RM610_09955 NZ_JAVRJX010000004.1 Protein Homology CDS 169494 170171 . + 0 ID=cds-WP_037575975.1;Parent=gene-RM610_RS09920;Dbxref=GenBank:WP_037575975.1;Name=WP_037575975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712443.1;locus_tag=RM610_RS09920;product=DUF554 domain-containing protein;protein_id=WP_037575975.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 170341 171279 . - . ID=gene-RM610_RS09925;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=RM610_RS09925;old_locus_tag=RM610_09960 NZ_JAVRJX010000004.1 Protein Homology CDS 170341 171279 . - 0 ID=cds-WP_311542258.1;Parent=gene-RM610_RS09925;Dbxref=GenBank:WP_311542258.1;Name=WP_311542258.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426091.1;locus_tag=RM610_RS09925;product=urea transporter;protein_id=WP_311542258.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 171489 171791 . + . ID=gene-RM610_RS09930;Name=RM610_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09930;old_locus_tag=RM610_09965 NZ_JAVRJX010000004.1 Protein Homology CDS 171489 171791 . + 0 ID=cds-WP_037575964.1;Parent=gene-RM610_RS09930;Dbxref=GenBank:WP_037575964.1;Name=WP_037575964.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=RM610_RS09930;product=urease subunit gamma;protein_id=WP_037575964.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 171803 172159 . + . ID=gene-RM610_RS09935;Name=RM610_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09935;old_locus_tag=RM610_09970 NZ_JAVRJX010000004.1 Protein Homology CDS 171803 172159 . + 0 ID=cds-WP_037575963.1;Parent=gene-RM610_RS09935;Dbxref=GenBank:WP_037575963.1;Name=WP_037575963.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=RM610_RS09935;product=urease subunit beta;protein_id=WP_037575963.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 172156 173871 . + . ID=gene-RM610_RS09940;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=RM610_RS09940;old_locus_tag=RM610_09975 NZ_JAVRJX010000004.1 Protein Homology CDS 172156 173871 . + 0 ID=cds-WP_311542259.1;Parent=gene-RM610_RS09940;Dbxref=GenBank:WP_311542259.1;Name=WP_311542259.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=RM610_RS09940;product=urease subunit alpha;protein_id=WP_311542259.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 174159 174704 . + . ID=gene-RM610_RS09945;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=RM610_RS09945;old_locus_tag=RM610_09980 NZ_JAVRJX010000004.1 Protein Homology CDS 174159 174704 . + 0 ID=cds-WP_037575957.1;Parent=gene-RM610_RS09945;Dbxref=GenBank:WP_037575957.1;Name=WP_037575957.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=RM610_RS09945;product=dCTP deaminase;protein_id=WP_037575957.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 174704 175603 . + . ID=gene-RM610_RS09950;Name=RM610_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09950;old_locus_tag=RM610_09985 NZ_JAVRJX010000004.1 Protein Homology CDS 174704 175603 . + 0 ID=cds-WP_107359058.1;Parent=gene-RM610_RS09950;Dbxref=GenBank:WP_107359058.1;Name=WP_107359058.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=RM610_RS09950;product=CobW family GTP-binding protein;protein_id=WP_107359058.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 175828 176562 . + . ID=gene-RM610_RS09955;Name=RM610_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09955;old_locus_tag=RM610_09990 NZ_JAVRJX010000004.1 Protein Homology CDS 175828 176562 . + 0 ID=cds-WP_107369552.1;Parent=gene-RM610_RS09955;Dbxref=GenBank:WP_107369552.1;Name=WP_107369552.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388431.1;locus_tag=RM610_RS09955;product=ABC transporter ATP-binding protein;protein_id=WP_107369552.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 176552 177637 . + . ID=gene-RM610_RS09960;Name=RM610_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09960;old_locus_tag=RM610_09995 NZ_JAVRJX010000004.1 Protein Homology CDS 176552 177637 . + 0 ID=cds-WP_107359060.1;Parent=gene-RM610_RS09960;Dbxref=GenBank:WP_107359060.1;Name=WP_107359060.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000696075.1;locus_tag=RM610_RS09960;product=ABC transporter permease;protein_id=WP_107359060.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 177730 178152 . + . ID=gene-RM610_RS09965;Name=RM610_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09965;old_locus_tag=RM610_10000 NZ_JAVRJX010000004.1 Protein Homology CDS 177730 178152 . + 0 ID=cds-WP_107369554.1;Parent=gene-RM610_RS09965;Dbxref=GenBank:WP_107369554.1;Name=WP_107369554.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=RM610_RS09965;product=universal stress protein;protein_id=WP_107369554.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 178351 179661 . + . ID=gene-RM610_RS09970;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=RM610_RS09970;old_locus_tag=RM610_10005 NZ_JAVRJX010000004.1 Protein Homology CDS 178351 179661 . + 0 ID=cds-WP_311542260.1;Parent=gene-RM610_RS09970;Dbxref=GenBank:WP_311542260.1;Name=WP_311542260.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829028.1;locus_tag=RM610_RS09970;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_311542260.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 179704 180057 . - . ID=gene-RM610_RS09975;Name=RM610_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09975;old_locus_tag=RM610_10010 NZ_JAVRJX010000004.1 Protein Homology CDS 179704 180057 . - 0 ID=cds-WP_107359063.1;Parent=gene-RM610_RS09975;Dbxref=GenBank:WP_107359063.1;Name=WP_107359063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482245.1;locus_tag=RM610_RS09975;product=DUF488 domain-containing protein;protein_id=WP_107359063.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 180100 181287 . - . ID=gene-RM610_RS09980;Name=RM610_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09980;old_locus_tag=RM610_10015 NZ_JAVRJX010000004.1 Protein Homology CDS 180100 181287 . - 0 ID=cds-WP_311542261.1;Parent=gene-RM610_RS09980;Dbxref=GenBank:WP_311542261.1;Name=WP_311542261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482260.1;locus_tag=RM610_RS09980;product=DUF819 family protein;protein_id=WP_311542261.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 181463 181642 . + . ID=gene-RM610_RS09985;Name=RM610_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09985;old_locus_tag=RM610_10020 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 181463 181642 . + 0 ID=cds-WP_107369557.1;Parent=gene-RM610_RS09985;Dbxref=GenBank:WP_107369557.1;Name=WP_107369557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS09985;product=hypothetical protein;protein_id=WP_107369557.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 182095 182634 . + . ID=gene-RM610_RS09990;Name=RM610_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09990;old_locus_tag=RM610_10025 NZ_JAVRJX010000004.1 Protein Homology CDS 182095 182634 . + 0 ID=cds-WP_107359065.1;Parent=gene-RM610_RS09990;Dbxref=GenBank:WP_107359065.1;Name=WP_107359065.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF058244.1;locus_tag=RM610_RS09990;product=SA1002 family membrane protein;protein_id=WP_107359065.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 182777 183745 . + . ID=gene-RM610_RS09995;Name=RM610_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS09995;old_locus_tag=RM610_10030 NZ_JAVRJX010000004.1 Protein Homology CDS 182777 183745 . + 0 ID=cds-WP_107363981.1;Parent=gene-RM610_RS09995;Dbxref=GenBank:WP_107363981.1;Name=WP_107363981.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426110.1;locus_tag=RM610_RS09995;product=ABC transporter permease;protein_id=WP_107363981.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 183735 184694 . + . ID=gene-RM610_RS10000;Name=RM610_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10000;old_locus_tag=RM610_10035 NZ_JAVRJX010000004.1 Protein Homology CDS 183735 184694 . + 0 ID=cds-WP_107381162.1;Parent=gene-RM610_RS10000;Dbxref=GenBank:WP_107381162.1;Name=WP_107381162.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426111.1;locus_tag=RM610_RS10000;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_107381162.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 184691 185494 . + . ID=gene-RM610_RS10005;Name=RM610_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10005;old_locus_tag=RM610_10040 NZ_JAVRJX010000004.1 Protein Homology CDS 184691 185494 . + 0 ID=cds-WP_119524026.1;Parent=gene-RM610_RS10005;Dbxref=GenBank:WP_119524026.1;Name=WP_119524026.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449075.1;locus_tag=RM610_RS10005;product=iron ABC transporter ATP-binding protein;protein_id=WP_119524026.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 185510 186544 . + . ID=gene-RM610_RS10010;Name=RM610_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10010;old_locus_tag=RM610_10045 NZ_JAVRJX010000004.1 Protein Homology CDS 185510 186544 . + 0 ID=cds-WP_311542262.1;Parent=gene-RM610_RS10010;Dbxref=GenBank:WP_311542262.1;Name=WP_311542262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426114.1;locus_tag=RM610_RS10010;product=ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD;protein_id=WP_311542262.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq pseudogene 186735 187931 . - . ID=gene-RM610_RS10015;Name=lip;end_range=187931,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=RM610_RS10015;old_locus_tag=RM610_10050;partial=true;pseudo=true NZ_JAVRJX010000004.1 Protein Homology CDS 186735 187931 . - 0 ID=cds-RM610_RS10015;Parent=gene-RM610_RS10015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=187931,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364631.1;locus_tag=RM610_RS10015;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 188491 188922 . - . ID=gene-RM610_RS10020;Name=RM610_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10020;old_locus_tag=RM610_10055 NZ_JAVRJX010000004.1 Protein Homology CDS 188491 188922 . - 0 ID=cds-WP_107359070.1;Parent=gene-RM610_RS10020;Dbxref=GenBank:WP_107359070.1;Name=WP_107359070.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289218.1;locus_tag=RM610_RS10020;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_107359070.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 189059 189679 . + . ID=gene-RM610_RS10025;Name=RM610_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10025;old_locus_tag=RM610_10060 NZ_JAVRJX010000004.1 Protein Homology CDS 189059 189679 . + 0 ID=cds-WP_107381894.1;Parent=gene-RM610_RS10025;Dbxref=GenBank:WP_107381894.1;Name=WP_107381894.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449496.1;locus_tag=RM610_RS10025;product=nitroreductase family protein;protein_id=WP_107381894.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 189781 190494 . + . ID=gene-RM610_RS10030;Name=RM610_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10030;old_locus_tag=RM610_10065 NZ_JAVRJX010000004.1 Protein Homology CDS 189781 190494 . + 0 ID=cds-WP_107359072.1;Parent=gene-RM610_RS10030;Dbxref=GenBank:WP_107359072.1;Name=WP_107359072.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912759.1;locus_tag=RM610_RS10030;product=GTP pyrophosphokinase;protein_id=WP_107359072.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 190531 191100 . - . ID=gene-RM610_RS10035;Name=RM610_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10035;old_locus_tag=RM610_10070 NZ_JAVRJX010000004.1 Protein Homology CDS 190531 191100 . - 0 ID=cds-WP_107359073.1;Parent=gene-RM610_RS10035;Dbxref=GenBank:WP_107359073.1;Name=WP_107359073.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463809.1;locus_tag=RM610_RS10035;product=M23 family metallopeptidase;protein_id=WP_107359073.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 191268 192128 . - . ID=gene-RM610_RS10040;Name=RM610_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10040;old_locus_tag=RM610_10075 NZ_JAVRJX010000004.1 Protein Homology CDS 191268 192128 . - 0 ID=cds-WP_311542263.1;Parent=gene-RM610_RS10040;Dbxref=GenBank:WP_311542263.1;Name=WP_311542263.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725232.1;locus_tag=RM610_RS10040;product=CHAP domain-containing protein;protein_id=WP_311542263.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 192843 193538 . - . ID=gene-RM610_RS10045;Name=RM610_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10045;old_locus_tag=RM610_10080 NZ_JAVRJX010000004.1 Protein Homology CDS 192843 193538 . - 0 ID=cds-WP_107369563.1;Parent=gene-RM610_RS10045;Dbxref=GenBank:WP_107369563.1;Name=WP_107369563.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499548.1;locus_tag=RM610_RS10045;product=transglycosylase family protein;protein_id=WP_107369563.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 193960 195378 . + . ID=gene-RM610_RS10050;Name=RM610_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10050;old_locus_tag=RM610_10085 NZ_JAVRJX010000004.1 Protein Homology CDS 193960 195378 . + 0 ID=cds-WP_311542264.1;Parent=gene-RM610_RS10050;Dbxref=GenBank:WP_311542264.1;Name=WP_311542264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=RM610_RS10050;product=phosphate--AMP phosphotransferase;protein_id=WP_311542264.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 195491 196372 . + . ID=gene-RM610_RS10055;Name=RM610_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10055;old_locus_tag=RM610_10090 NZ_JAVRJX010000004.1 Protein Homology CDS 195491 196372 . + 0 ID=cds-WP_311542265.1;Parent=gene-RM610_RS10055;Dbxref=GenBank:WP_311542265.1;Name=WP_311542265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=RM610_RS10055;product=alpha/beta fold hydrolase;protein_id=WP_311542265.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 196431 197066 . + . ID=gene-RM610_RS10060;Name=RM610_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10060;old_locus_tag=RM610_10095 NZ_JAVRJX010000004.1 Protein Homology CDS 196431 197066 . + 0 ID=cds-WP_311542266.1;Parent=gene-RM610_RS10060;Dbxref=GenBank:WP_311542266.1;Name=WP_311542266.1;Ontology_term=GO:0006569,GO:0004061;gbkey=CDS;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process|0006569||IEA;inference=COORDINATES: protein motif:HMM:NF016115.7;locus_tag=RM610_RS10060;product=cyclase family protein;protein_id=WP_311542266.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 197108 198322 . + . ID=gene-RM610_RS10065;Name=RM610_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10065;old_locus_tag=RM610_10100 NZ_JAVRJX010000004.1 Protein Homology CDS 197108 198322 . + 0 ID=cds-WP_311542267.1;Parent=gene-RM610_RS10065;Dbxref=GenBank:WP_311542267.1;Name=WP_311542267.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510051.1;locus_tag=RM610_RS10065;product=Bcr/CflA family efflux MFS transporter;protein_id=WP_311542267.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 198406 198609 . - . ID=gene-RM610_RS10070;Name=RM610_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10070;old_locus_tag=RM610_10105 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 198406 198609 . - 0 ID=cds-WP_311542268.1;Parent=gene-RM610_RS10070;Dbxref=GenBank:WP_311542268.1;Name=WP_311542268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10070;product=hypothetical protein;protein_id=WP_311542268.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 198843 203720 . + . ID=gene-RM610_RS10075;Name=RM610_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10075;old_locus_tag=RM610_10110 NZ_JAVRJX010000004.1 Protein Homology CDS 198843 203720 . + 0 ID=cds-WP_311542269.1;Parent=gene-RM610_RS10075;Dbxref=GenBank:WP_311542269.1;Name=WP_311542269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.7;locus_tag=RM610_RS10075;product=Ig-like domain-containing protein;protein_id=WP_311542269.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 203927 204793 . - . ID=gene-RM610_RS10080;Name=RM610_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10080;old_locus_tag=RM610_10115 NZ_JAVRJX010000004.1 Protein Homology CDS 203927 204793 . - 0 ID=cds-WP_107359081.1;Parent=gene-RM610_RS10080;Dbxref=GenBank:WP_107359081.1;Name=WP_107359081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465127.1;locus_tag=RM610_RS10080;product=SDR family oxidoreductase;protein_id=WP_107359081.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 204814 206814 . - . ID=gene-RM610_RS10085;Name=RM610_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10085;old_locus_tag=RM610_10120 NZ_JAVRJX010000004.1 Protein Homology CDS 204814 206814 . - 0 ID=cds-WP_107359082.1;Parent=gene-RM610_RS10085;Dbxref=GenBank:WP_107359082.1;Name=WP_107359082.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=RM610_RS10085;product=catalase;protein_id=WP_107359082.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 207070 208194 . + . ID=gene-RM610_RS10090;Name=RM610_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10090;old_locus_tag=RM610_10125 NZ_JAVRJX010000004.1 Protein Homology CDS 207070 208194 . + 0 ID=cds-WP_119524037.1;Parent=gene-RM610_RS10090;Dbxref=GenBank:WP_119524037.1;Name=WP_119524037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=RM610_RS10090;product=hypothetical protein;protein_id=WP_119524037.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 208422 209564 . + . ID=gene-RM610_RS10095;Name=RM610_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10095;old_locus_tag=RM610_10130 NZ_JAVRJX010000004.1 Protein Homology CDS 208422 209564 . + 0 ID=cds-WP_103159556.1;Parent=gene-RM610_RS10095;Dbxref=GenBank:WP_103159556.1;Name=WP_103159556.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006983.1;locus_tag=RM610_RS10095;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_103159556.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 209610 209786 . - . ID=gene-RM610_RS10100;Name=RM610_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10100;old_locus_tag=RM610_10135 NZ_JAVRJX010000004.1 Protein Homology CDS 209610 209786 . - 0 ID=cds-WP_311542270.1;Parent=gene-RM610_RS10100;Dbxref=GenBank:WP_311542270.1;Name=WP_311542270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM610_RS10100;product=VraH family protein;protein_id=WP_311542270.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 209800 209985 . - . ID=gene-RM610_RS10105;Name=RM610_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10105;old_locus_tag=RM610_10140 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 209800 209985 . - 0 ID=cds-WP_107376020.1;Parent=gene-RM610_RS10105;Dbxref=GenBank:WP_107376020.1;Name=WP_107376020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10105;product=hypothetical protein;protein_id=WP_107376020.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 209998 210198 . - . ID=gene-RM610_RS10110;Name=RM610_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10110;old_locus_tag=RM610_10145 NZ_JAVRJX010000004.1 Protein Homology CDS 209998 210198 . - 0 ID=cds-WP_037575879.1;Parent=gene-RM610_RS10110;Dbxref=GenBank:WP_037575879.1;Name=WP_037575879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM610_RS10110;product=VraH family peptide resistance protein;protein_id=WP_037575879.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 210326 211210 . + . ID=gene-RM610_RS10115;Name=RM610_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10115;old_locus_tag=RM610_10150 NZ_JAVRJX010000004.1 Protein Homology CDS 210326 211210 . + 0 ID=cds-WP_311542271.1;Parent=gene-RM610_RS10115;Dbxref=GenBank:WP_311542271.1;Name=WP_311542271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010990549.1;locus_tag=RM610_RS10115;product=SDR family oxidoreductase;protein_id=WP_311542271.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 211445 212899 . + . ID=gene-RM610_RS10120;Name=RM610_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10120;old_locus_tag=RM610_10155 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 211445 212899 . + 0 ID=cds-WP_311542272.1;Parent=gene-RM610_RS10120;Dbxref=GenBank:WP_311542272.1;Name=WP_311542272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10120;product=hypothetical protein;protein_id=WP_311542272.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 213253 213915 . + . ID=gene-RM610_RS10125;Name=RM610_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10125;old_locus_tag=RM610_10160 NZ_JAVRJX010000004.1 Protein Homology CDS 213253 213915 . + 0 ID=cds-WP_107369575.1;Parent=gene-RM610_RS10125;Dbxref=GenBank:WP_107369575.1;Name=WP_107369575.1;Ontology_term=GO:0009103,GO:0061097;gbkey=CDS;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,regulation of protein tyrosine kinase activity|0061097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667264.1;locus_tag=RM610_RS10125;product=YveK family protein;protein_id=WP_107369575.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 213931 214638 . + . ID=gene-RM610_RS10130;Name=RM610_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10130;old_locus_tag=RM610_10165 NZ_JAVRJX010000004.1 Protein Homology CDS 213931 214638 . + 0 ID=cds-WP_105987022.1;Parent=gene-RM610_RS10130;Dbxref=GenBank:WP_105987022.1;Name=WP_105987022.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508553.1;locus_tag=RM610_RS10130;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_105987022.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 214635 215405 . + . ID=gene-RM610_RS10135;Name=RM610_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10135;old_locus_tag=RM610_10170 NZ_JAVRJX010000004.1 Protein Homology CDS 214635 215405 . + 0 ID=cds-WP_311542273.1;Parent=gene-RM610_RS10135;Dbxref=GenBank:WP_311542273.1;Name=WP_311542273.1;Ontology_term=GO:0004725,GO:0030145;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488244.1;locus_tag=RM610_RS10135;product=tyrosine-protein phosphatase;protein_id=WP_311542273.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 215429 217237 . + . ID=gene-RM610_RS10140;Name=RM610_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10140;old_locus_tag=RM610_10175 NZ_JAVRJX010000004.1 Protein Homology CDS 215429 217237 . + 0 ID=cds-WP_107369577.1;Parent=gene-RM610_RS10140;Dbxref=GenBank:WP_107369577.1;Name=WP_107369577.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723019.1;locus_tag=RM610_RS10140;product=polysaccharide biosynthesis protein;protein_id=WP_107369577.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 217248 218273 . + . ID=gene-RM610_RS10145;Name=RM610_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10145;old_locus_tag=RM610_10180 NZ_JAVRJX010000004.1 Protein Homology CDS 217248 218273 . + 0 ID=cds-WP_311542274.1;Parent=gene-RM610_RS10145;Dbxref=GenBank:WP_311542274.1;Name=WP_311542274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498718.1;locus_tag=RM610_RS10145;product=polysaccharide biosynthesis protein;protein_id=WP_311542274.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 218288 219397 . + . ID=gene-RM610_RS10150;Name=RM610_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10150;old_locus_tag=RM610_10185 NZ_JAVRJX010000004.1 Protein Homology CDS 218288 219397 . + 0 ID=cds-WP_311542275.1;Parent=gene-RM610_RS10150;Dbxref=GenBank:WP_311542275.1;Name=WP_311542275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328573.1;locus_tag=RM610_RS10150;product=capsular polysaccharide biosynthesis protein CapF;protein_id=WP_311542275.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 219401 220528 . + . ID=gene-RM610_RS10155;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM610_RS10155;old_locus_tag=RM610_10190 NZ_JAVRJX010000004.1 Protein Homology CDS 219401 220528 . + 0 ID=cds-WP_107369580.1;Parent=gene-RM610_RS10155;Dbxref=GenBank:WP_107369580.1;Name=WP_107369580.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460630.1;locus_tag=RM610_RS10155;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_107369580.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 220525 221124 . + . ID=gene-RM610_RS10160;Name=RM610_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10160;old_locus_tag=RM610_10195 NZ_JAVRJX010000004.1 Protein Homology CDS 220525 221124 . + 0 ID=cds-WP_311542276.1;Parent=gene-RM610_RS10160;Dbxref=GenBank:WP_311542276.1;Name=WP_311542276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460628.1;locus_tag=RM610_RS10160;product=LbetaH domain-containing protein;protein_id=WP_311542276.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 221134 222237 . + . ID=gene-RM610_RS10165;Name=RM610_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10165;old_locus_tag=RM610_10200 NZ_JAVRJX010000004.1 Protein Homology CDS 221134 222237 . + 0 ID=cds-WP_311542277.1;Parent=gene-RM610_RS10165;Dbxref=GenBank:WP_311542277.1;Name=WP_311542277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460627.1;locus_tag=RM610_RS10165;product=glycosyltransferase;protein_id=WP_311542277.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 222611 223450 . + . ID=gene-RM610_RS10170;Name=RM610_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10170;old_locus_tag=RM610_10205 NZ_JAVRJX010000004.1 Protein Homology CDS 222611 223450 . + 0 ID=cds-WP_311542278.1;Parent=gene-RM610_RS10170;Dbxref=GenBank:WP_311542278.1;Name=WP_311542278.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: protein motif:HMM:NF016800.7;locus_tag=RM610_RS10170;product=O-antigen ligase family protein;protein_id=WP_311542278.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 223422 224618 . + . ID=gene-RM610_RS10175;Name=RM610_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10175;old_locus_tag=RM610_10210 NZ_JAVRJX010000004.1 GeneMarkS-2+ CDS 223422 224618 . + 0 ID=cds-WP_311542279.1;Parent=gene-RM610_RS10175;Dbxref=GenBank:WP_311542279.1;Name=WP_311542279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10175;product=polysaccharide biosynthesis protein;protein_id=WP_311542279.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 224672 225883 . + . ID=gene-RM610_RS10180;Name=RM610_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10180;old_locus_tag=RM610_10215 NZ_JAVRJX010000004.1 Protein Homology CDS 224672 225883 . + 0 ID=cds-WP_311542280.1;Parent=gene-RM610_RS10180;Dbxref=GenBank:WP_311542280.1;Name=WP_311542280.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=RM610_RS10180;product=glycosyltransferase family 4 protein;protein_id=WP_311542280.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 225867 226457 . + . ID=gene-RM610_RS10185;Name=RM610_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10185;old_locus_tag=RM610_10220 NZ_JAVRJX010000004.1 Protein Homology CDS 225867 226457 . + 0 ID=cds-WP_107519280.1;Parent=gene-RM610_RS10185;Dbxref=GenBank:WP_107519280.1;Name=WP_107519280.1;Ontology_term=GO:0000271,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274711.1;locus_tag=RM610_RS10185;product=sugar transferase;protein_id=WP_107519280.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 226474 226974 . + . ID=gene-RM610_RS10190;Name=RM610_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10190;old_locus_tag=RM610_10225 NZ_JAVRJX010000004.1 Protein Homology CDS 226474 226974 . + 0 ID=cds-WP_198644783.1;Parent=gene-RM610_RS10190;Dbxref=GenBank:WP_198644783.1;Name=WP_198644783.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=RM610_RS10190;product=GNAT family N-acetyltransferase;protein_id=WP_198644783.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 226975 227934 . + . ID=gene-RM610_RS10195;Name=RM610_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10195;old_locus_tag=RM610_10230 NZ_JAVRJX010000004.1 Protein Homology CDS 226975 227934 . + 0 ID=cds-WP_198644784.1;Parent=gene-RM610_RS10195;Dbxref=GenBank:WP_198644784.1;Name=WP_198644784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016427228.1;locus_tag=RM610_RS10195;product=ATP-grasp domain-containing protein;protein_id=WP_198644784.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 227940 229076 . + . ID=gene-RM610_RS10200;Name=RM610_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10200;old_locus_tag=RM610_10235 NZ_JAVRJX010000004.1 Protein Homology CDS 227940 229076 . + 0 ID=cds-WP_107376178.1;Parent=gene-RM610_RS10200;Dbxref=GenBank:WP_107376178.1;Name=WP_107376178.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444557.1;locus_tag=RM610_RS10200;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_107376178.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 229216 230367 . + . ID=gene-RM610_RS10205;Name=RM610_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10205;old_locus_tag=RM610_10240 NZ_JAVRJX010000004.1 Protein Homology CDS 229216 230367 . + 0 ID=cds-WP_311542281.1;Parent=gene-RM610_RS10205;Dbxref=GenBank:WP_311542281.1;Name=WP_311542281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455551.1;locus_tag=RM610_RS10205;product=FAD/NAD(P)-binding protein;protein_id=WP_311542281.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 230438 230821 . + . ID=gene-RM610_RS10210;Name=RM610_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10210;old_locus_tag=RM610_10245 NZ_JAVRJX010000004.1 Protein Homology CDS 230438 230821 . + 0 ID=cds-WP_107359094.1;Parent=gene-RM610_RS10210;Dbxref=GenBank:WP_107359094.1;Name=WP_107359094.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426132.1;locus_tag=RM610_RS10210;product=NUDIX hydrolase;protein_id=WP_107359094.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 230863 231264 . - . ID=gene-RM610_RS10215;Name=RM610_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10215;old_locus_tag=RM610_10250 NZ_JAVRJX010000004.1 Protein Homology CDS 230863 231264 . - 0 ID=cds-WP_228512646.1;Parent=gene-RM610_RS10215;Dbxref=GenBank:WP_228512646.1;Name=WP_228512646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=RM610_RS10215;product=hypothetical protein;protein_id=WP_228512646.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 231879 241010 . + . ID=gene-RM610_RS10220;Name=RM610_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10220;old_locus_tag=RM610_10255 NZ_JAVRJX010000004.1 Protein Homology CDS 231879 241010 . + 0 ID=cds-WP_311542282.1;Parent=gene-RM610_RS10220;Dbxref=GenBank:WP_311542282.1;Name=WP_311542282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533362.1;locus_tag=RM610_RS10220;product=Rib/alpha-like domain-containing protein;protein_id=WP_311542282.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 241155 242285 . - . ID=gene-RM610_RS10225;Name=RM610_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10225;old_locus_tag=RM610_10260 NZ_JAVRJX010000004.1 Protein Homology CDS 241155 242285 . - 0 ID=cds-WP_107375437.1;Parent=gene-RM610_RS10225;Dbxref=GenBank:WP_107375437.1;Name=WP_107375437.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426134.1;locus_tag=RM610_RS10225;product=PucR family transcriptional regulator;protein_id=WP_107375437.1;transl_table=11 NZ_JAVRJX010000004.1 RefSeq gene 242693 246606 . + . ID=gene-RM610_RS10230;Name=RM610_RS10230;end_range=246606,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10230;old_locus_tag=RM610_10265;partial=true NZ_JAVRJX010000004.1 Protein Homology CDS 242693 246606 . + 0 ID=cds-WP_311542283.1;Parent=gene-RM610_RS10230;Dbxref=GenBank:WP_311542283.1;Name=WP_311542283.1;end_range=246606,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM610_RS10230;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311542283.1;transl_table=11 ##sequence-region NZ_JAVRJX010000005.1 1 114833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000005.1 RefSeq region 1 114833 . + . ID=NZ_JAVRJX010000005.1:1..114833;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000005.1 RefSeq gene 503 961 . - . ID=gene-RM610_RS10235;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=RM610_RS10235;old_locus_tag=RM610_10270 NZ_JAVRJX010000005.1 Protein Homology CDS 503 961 . - 0 ID=cds-WP_107359318.1;Parent=gene-RM610_RS10235;Dbxref=GenBank:WP_107359318.1;Name=WP_107359318.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169390.1;locus_tag=RM610_RS10235;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_107359318.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 1046 1996 . - . ID=gene-RM610_RS10240;Name=RM610_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10240;old_locus_tag=RM610_10275 NZ_JAVRJX010000005.1 Protein Homology CDS 1046 1996 . - 0 ID=cds-WP_107359317.1;Parent=gene-RM610_RS10240;Dbxref=GenBank:WP_107359317.1;Name=WP_107359317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=RM610_RS10240;product=phosphoglycerate dehydrogenase;protein_id=WP_107359317.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 2002 2460 . - . ID=gene-RM610_RS10245;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=RM610_RS10245;old_locus_tag=RM610_10280 NZ_JAVRJX010000005.1 Protein Homology CDS 2002 2460 . - 0 ID=cds-WP_107359316.1;Parent=gene-RM610_RS10245;Dbxref=GenBank:WP_107359316.1;Name=WP_107359316.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=RM610_RS10245;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_107359316.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 2541 3836 . + . ID=gene-RM610_RS10250;Name=RM610_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10250;old_locus_tag=RM610_10285 NZ_JAVRJX010000005.1 Protein Homology CDS 2541 3836 . + 0 ID=cds-WP_107376158.1;Parent=gene-RM610_RS10250;Dbxref=GenBank:WP_107376158.1;Name=WP_107376158.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=RM610_RS10250;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_107376158.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 4053 5147 . + . ID=gene-RM610_RS10255;Name=RM610_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10255;old_locus_tag=RM610_10290 NZ_JAVRJX010000005.1 Protein Homology CDS 4053 5147 . + 0 ID=cds-WP_107359314.1;Parent=gene-RM610_RS10255;Dbxref=GenBank:WP_107359314.1;Name=WP_107359314.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=RM610_RS10255;product=FUSC family protein;protein_id=WP_107359314.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 5222 6799 . - . ID=gene-RM610_RS10260;Name=RM610_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10260;old_locus_tag=RM610_10295 NZ_JAVRJX010000005.1 Protein Homology CDS 5222 6799 . - 0 ID=cds-WP_107370106.1;Parent=gene-RM610_RS10260;Dbxref=GenBank:WP_107370106.1;Name=WP_107370106.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510022.1;locus_tag=RM610_RS10260;product=FMN-binding glutamate synthase family protein;protein_id=WP_107370106.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 6965 8701 . - . ID=gene-RM610_RS10265;Name=RM610_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10265;old_locus_tag=RM610_10300 NZ_JAVRJX010000005.1 Protein Homology CDS 6965 8701 . - 0 ID=cds-WP_103159011.1;Parent=gene-RM610_RS10265;Dbxref=GenBank:WP_103159011.1;Name=WP_103159011.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=RM610_RS10265;product=ABC transporter ATP-binding protein;protein_id=WP_103159011.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 8835 9380 . - . ID=gene-RM610_RS10270;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=RM610_RS10270;old_locus_tag=RM610_10305 NZ_JAVRJX010000005.1 Protein Homology CDS 8835 9380 . - 0 ID=cds-WP_037575819.1;Parent=gene-RM610_RS10270;Dbxref=GenBank:WP_037575819.1;Name=WP_037575819.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495215.1;locus_tag=RM610_RS10270;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_037575819.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 9437 10489 . - . ID=gene-RM610_RS10275;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=RM610_RS10275;old_locus_tag=RM610_10310 NZ_JAVRJX010000005.1 Protein Homology CDS 9437 10489 . - 0 ID=cds-WP_311542286.1;Parent=gene-RM610_RS10275;Dbxref=GenBank:WP_311542286.1;Name=WP_311542286.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722818.1;locus_tag=RM610_RS10275;product=A/G-specific adenine glycosylase;protein_id=WP_311542286.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 10578 11555 . + . ID=gene-RM610_RS10280;Name=RM610_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10280;old_locus_tag=RM610_10315 NZ_JAVRJX010000005.1 Protein Homology CDS 10578 11555 . + 0 ID=cds-WP_311542287.1;Parent=gene-RM610_RS10280;Dbxref=GenBank:WP_311542287.1;Name=WP_311542287.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=RM610_RS10280;product=metal-dependent hydrolase;protein_id=WP_311542287.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 11994 12767 . - . ID=gene-RM610_RS10285;Name=RM610_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10285;old_locus_tag=RM610_10320 NZ_JAVRJX010000005.1 Protein Homology CDS 11994 12767 . - 0 ID=cds-WP_311542288.1;Parent=gene-RM610_RS10285;Dbxref=GenBank:WP_311542288.1;Name=WP_311542288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=RM610_RS10285;product=teichoic acid translocation permease;protein_id=WP_311542288.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 12776 14302 . - . ID=gene-RM610_RS10290;Name=RM610_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10290;old_locus_tag=RM610_10325 NZ_JAVRJX010000005.1 Protein Homology CDS 12776 14302 . - 0 ID=cds-WP_107381816.1;Parent=gene-RM610_RS10290;Dbxref=GenBank:WP_107381816.1;Name=WP_107381816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613498.1;locus_tag=RM610_RS10290;product=ABC transporter ATP-binding protein;protein_id=WP_107381816.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 14318 14629 . - . ID=gene-RM610_RS10295;Name=RM610_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10295;old_locus_tag=RM610_10330 NZ_JAVRJX010000005.1 Protein Homology CDS 14318 14629 . - 0 ID=cds-WP_105965737.1;Parent=gene-RM610_RS10295;Dbxref=GenBank:WP_105965737.1;Name=WP_105965737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435810.1;locus_tag=RM610_RS10295;product=YfhH family protein;protein_id=WP_105965737.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 14619 15425 . - . ID=gene-RM610_RS10300;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=RM610_RS10300;old_locus_tag=RM610_10335 NZ_JAVRJX010000005.1 Protein Homology CDS 14619 15425 . - 0 ID=cds-WP_105965738.1;Parent=gene-RM610_RS10300;Dbxref=GenBank:WP_105965738.1;Name=WP_105965738.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175220.1;locus_tag=RM610_RS10300;product=recombination regulator RecX;protein_id=WP_105965738.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 15511 16317 . - . ID=gene-RM610_RS10305;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=RM610_RS10305;old_locus_tag=RM610_10340 NZ_JAVRJX010000005.1 Protein Homology CDS 15511 16317 . - 0 ID=cds-WP_311542289.1;Parent=gene-RM610_RS10305;Dbxref=GenBank:WP_311542289.1;Name=WP_311542289.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452353.1;locus_tag=RM610_RS10305;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_311542289.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 16482 18227 . + . ID=gene-RM610_RS10310;Name=RM610_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10310;old_locus_tag=RM610_10345 NZ_JAVRJX010000005.1 Protein Homology CDS 16482 18227 . + 0 ID=cds-WP_107381616.1;Parent=gene-RM610_RS10310;Dbxref=GenBank:WP_107381616.1;Name=WP_107381616.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=RM610_RS10310;product=pyruvate oxidase;protein_id=WP_107381616.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 18454 18972 . - . ID=gene-RM610_RS10315;Name=RM610_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10315;old_locus_tag=RM610_10350 NZ_JAVRJX010000005.1 Protein Homology CDS 18454 18972 . - 0 ID=cds-WP_037575802.1;Parent=gene-RM610_RS10315;Dbxref=GenBank:WP_037575802.1;Name=WP_037575802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302786.1;locus_tag=RM610_RS10315;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_037575802.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 19043 19204 . - . ID=gene-RM610_RS10320;Name=RM610_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10320;old_locus_tag=RM610_10355 NZ_JAVRJX010000005.1 Protein Homology CDS 19043 19204 . - 0 ID=cds-WP_165806293.1;Parent=gene-RM610_RS10320;Dbxref=GenBank:WP_165806293.1;Name=WP_165806293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=RM610_RS10320;product=SE1561 family protein;protein_id=WP_165806293.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 19314 20450 . + . ID=gene-RM610_RS10325;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=RM610_RS10325;old_locus_tag=RM610_10360 NZ_JAVRJX010000005.1 Protein Homology CDS 19314 20450 . + 0 ID=cds-WP_311542290.1;Parent=gene-RM610_RS10325;Dbxref=GenBank:WP_311542290.1;Name=WP_311542290.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425498.1;locus_tag=RM610_RS10325;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_311542290.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 20518 21045 . - . ID=gene-RM610_RS10330;Name=RM610_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10330;old_locus_tag=RM610_10365 NZ_JAVRJX010000005.1 Protein Homology CDS 20518 21045 . - 0 ID=cds-WP_107359307.1;Parent=gene-RM610_RS10330;Dbxref=GenBank:WP_107359307.1;Name=WP_107359307.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384028.1;locus_tag=RM610_RS10330;product=acyl-CoA thioesterase;protein_id=WP_107359307.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 21064 22293 . - . ID=gene-RM610_RS10335;Name=RM610_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10335;old_locus_tag=RM610_10370 NZ_JAVRJX010000005.1 Protein Homology CDS 21064 22293 . - 0 ID=cds-WP_239991152.1;Parent=gene-RM610_RS10335;Dbxref=GenBank:WP_239991152.1;Name=WP_239991152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469621.1;locus_tag=RM610_RS10335;product=aminopeptidase;protein_id=WP_239991152.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 22324 22533 . - . ID=gene-RM610_RS10340;Name=RM610_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10340;old_locus_tag=RM610_10375 NZ_JAVRJX010000005.1 Protein Homology CDS 22324 22533 . - 0 ID=cds-WP_037575795.1;Parent=gene-RM610_RS10340;Dbxref=GenBank:WP_037575795.1;Name=WP_037575795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169369.1;locus_tag=RM610_RS10340;product=DUF1128 domain-containing protein;protein_id=WP_037575795.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 22666 23124 . + . ID=gene-RM610_RS10345;Name=RM610_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10345;old_locus_tag=RM610_10380 NZ_JAVRJX010000005.1 Protein Homology CDS 22666 23124 . + 0 ID=cds-WP_107375625.1;Parent=gene-RM610_RS10345;Dbxref=GenBank:WP_107375625.1;Name=WP_107375625.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=RM610_RS10345;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_107375625.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 23129 23404 . + . ID=gene-RM610_RS10350;Name=RM610_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10350;old_locus_tag=RM610_10385 NZ_JAVRJX010000005.1 Protein Homology CDS 23129 23404 . + 0 ID=cds-WP_037575789.1;Parent=gene-RM610_RS10350;Dbxref=GenBank:WP_037575789.1;Name=WP_037575789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500587.1;locus_tag=RM610_RS10350;product=YtxH domain-containing protein;protein_id=WP_037575789.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 23531 24799 . + . ID=gene-RM610_RS10355;Name=RM610_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10355;old_locus_tag=RM610_10390 NZ_JAVRJX010000005.1 Protein Homology CDS 23531 24799 . + 0 ID=cds-WP_107389471.1;Parent=gene-RM610_RS10355;Dbxref=GenBank:WP_107389471.1;Name=WP_107389471.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452290.1;locus_tag=RM610_RS10355;product=YihY/virulence factor BrkB family protein;protein_id=WP_107389471.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 24842 25414 . + . ID=gene-RM610_RS10360;Name=RM610_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10360;old_locus_tag=RM610_10395 NZ_JAVRJX010000005.1 Protein Homology CDS 24842 25414 . + 0 ID=cds-WP_107359303.1;Parent=gene-RM610_RS10360;Dbxref=GenBank:WP_107359303.1;Name=WP_107359303.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384034.1;locus_tag=RM610_RS10360;product=beta-class carbonic anhydrase;protein_id=WP_107359303.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 25621 26250 . - . ID=gene-RM610_RS10365;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=RM610_RS10365;old_locus_tag=RM610_10400 NZ_JAVRJX010000005.1 Protein Homology CDS 25621 26250 . - 0 ID=cds-WP_037575783.1;Parent=gene-RM610_RS10365;Dbxref=GenBank:WP_037575783.1;Name=WP_037575783.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=RM610_RS10365;product=response regulator transcription factor VraR;protein_id=WP_037575783.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 26240 27283 . - . ID=gene-RM610_RS10370;Name=RM610_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10370;old_locus_tag=RM610_10405 NZ_JAVRJX010000005.1 Protein Homology CDS 26240 27283 . - 0 ID=cds-WP_311542291.1;Parent=gene-RM610_RS10370;Dbxref=GenBank:WP_311542291.1;Name=WP_311542291.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=RM610_RS10370;product=sensor histidine kinase;protein_id=WP_311542291.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 27280 27981 . - . ID=gene-RM610_RS10375;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=RM610_RS10375;old_locus_tag=RM610_10410 NZ_JAVRJX010000005.1 Protein Homology CDS 27280 27981 . - 0 ID=cds-WP_311542292.1;Parent=gene-RM610_RS10375;Dbxref=GenBank:WP_311542292.1;Name=WP_311542292.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=RM610_RS10375;product=cell wall-active antibiotics response protein VraT;protein_id=WP_311542292.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 27994 28383 . - . ID=gene-RM610_RS10380;Name=RM610_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10380;old_locus_tag=RM610_10415 NZ_JAVRJX010000005.1 GeneMarkS-2+ CDS 27994 28383 . - 0 ID=cds-WP_037575778.1;Parent=gene-RM610_RS10380;Dbxref=GenBank:WP_037575778.1;Name=WP_037575778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10380;product=hypothetical protein;protein_id=WP_037575778.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 28479 29237 . - . ID=gene-RM610_RS10385;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=RM610_RS10385;old_locus_tag=RM610_10420 NZ_JAVRJX010000005.1 Protein Homology CDS 28479 29237 . - 0 ID=cds-WP_107359301.1;Parent=gene-RM610_RS10385;Dbxref=GenBank:WP_107359301.1;Name=WP_107359301.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425510.1;locus_tag=RM610_RS10385;product=type I methionyl aminopeptidase;protein_id=WP_107359301.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 29569 30579 . + . ID=gene-RM610_RS10390;Name=RM610_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10390;old_locus_tag=RM610_10425 NZ_JAVRJX010000005.1 Protein Homology CDS 29569 30579 . + 0 ID=cds-WP_107370073.1;Parent=gene-RM610_RS10390;Dbxref=GenBank:WP_107370073.1;Name=WP_107370073.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445470.1;locus_tag=RM610_RS10390;product=FUSC family protein;protein_id=WP_107370073.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 30617 31345 . - . ID=gene-RM610_RS10395;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=RM610_RS10395;old_locus_tag=RM610_10430 NZ_JAVRJX010000005.1 Protein Homology CDS 30617 31345 . - 0 ID=cds-WP_107359299.1;Parent=gene-RM610_RS10395;Dbxref=GenBank:WP_107359299.1;Name=WP_107359299.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461344.1;locus_tag=RM610_RS10395;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_107359299.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 31346 32656 . - . ID=gene-RM610_RS10400;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=RM610_RS10400;old_locus_tag=RM610_10435 NZ_JAVRJX010000005.1 Protein Homology CDS 31346 32656 . - 0 ID=cds-WP_107375621.1;Parent=gene-RM610_RS10400;Dbxref=GenBank:WP_107375621.1;Name=WP_107375621.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425517.1;locus_tag=RM610_RS10400;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_107375621.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 32806 33309 . + . ID=gene-RM610_RS10405;Name=RM610_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10405;old_locus_tag=RM610_10440 NZ_JAVRJX010000005.1 Protein Homology CDS 32806 33309 . + 0 ID=cds-WP_105986692.1;Parent=gene-RM610_RS10405;Dbxref=GenBank:WP_105986692.1;Name=WP_105986692.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302773.1;locus_tag=RM610_RS10405;product=ferritin;protein_id=WP_105986692.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 33923 34483 . + . ID=gene-RM610_RS10410;Name=RM610_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10410;old_locus_tag=RM610_10445 NZ_JAVRJX010000005.1 Protein Homology CDS 33923 34483 . + 0 ID=cds-WP_311542293.1;Parent=gene-RM610_RS10410;Dbxref=GenBank:WP_311542293.1;Name=WP_311542293.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=RM610_RS10410;product=3'-5' exonuclease;protein_id=WP_311542293.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 34478 35548 . - . ID=gene-RM610_RS10415;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=RM610_RS10415;old_locus_tag=RM610_10450 NZ_JAVRJX010000005.1 Protein Homology CDS 34478 35548 . - 0 ID=cds-WP_311542294.1;Parent=gene-RM610_RS10415;Dbxref=GenBank:WP_311542294.1;Name=WP_311542294.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=RM610_RS10415;product=DNA polymerase IV;protein_id=WP_311542294.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 35795 36325 . - . ID=gene-RM610_RS10420;Name=RM610_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10420;old_locus_tag=RM610_10455 NZ_JAVRJX010000005.1 Protein Homology CDS 35795 36325 . - 0 ID=cds-WP_311542295.1;Parent=gene-RM610_RS10420;Dbxref=GenBank:WP_311542295.1;Name=WP_311542295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023096.7;locus_tag=RM610_RS10420;product=DUF3267 domain-containing protein;protein_id=WP_311542295.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 36399 37727 . - . ID=gene-RM610_RS10425;Name=RM610_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10425;old_locus_tag=RM610_10460 NZ_JAVRJX010000005.1 Protein Homology CDS 36399 37727 . - 0 ID=cds-WP_311542296.1;Parent=gene-RM610_RS10425;Dbxref=GenBank:WP_311542296.1;Name=WP_311542296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.7;locus_tag=RM610_RS10425;product=carboxylesterase family protein;protein_id=WP_311542296.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 37742 39106 . - . ID=gene-RM610_RS10430;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=RM610_RS10430;old_locus_tag=RM610_10465 NZ_JAVRJX010000005.1 Protein Homology CDS 37742 39106 . - 0 ID=cds-WP_311542297.1;Parent=gene-RM610_RS10430;Dbxref=GenBank:WP_311542297.1;Name=WP_311542297.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435907.1;locus_tag=RM610_RS10430;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_311542297.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 39197 40129 . - . ID=gene-RM610_RS10435;Name=RM610_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10435;old_locus_tag=RM610_10470 NZ_JAVRJX010000005.1 Protein Homology CDS 39197 40129 . - 0 ID=cds-WP_105986686.1;Parent=gene-RM610_RS10435;Dbxref=GenBank:WP_105986686.1;Name=WP_105986686.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=RM610_RS10435;product=diacylglycerol kinase;protein_id=WP_105986686.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 40420 41847 . - . ID=gene-RM610_RS10440;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=RM610_RS10440;old_locus_tag=RM610_10475 NZ_JAVRJX010000005.1 Protein Homology CDS 40420 41847 . - 0 ID=cds-WP_107359291.1;Parent=gene-RM610_RS10440;Dbxref=GenBank:WP_107359291.1;Name=WP_107359291.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=RM610_RS10440;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_107359291.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 41861 43321 . - . ID=gene-RM610_RS10445;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=RM610_RS10445;old_locus_tag=RM610_10480 NZ_JAVRJX010000005.1 Protein Homology CDS 41861 43321 . - 0 ID=cds-WP_311542298.1;Parent=gene-RM610_RS10445;Dbxref=GenBank:WP_311542298.1;Name=WP_311542298.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=RM610_RS10445;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_311542298.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 43323 43625 . - . ID=gene-RM610_RS10450;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=RM610_RS10450;old_locus_tag=RM610_10485 NZ_JAVRJX010000005.1 Protein Homology CDS 43323 43625 . - 0 ID=cds-WP_105986683.1;Parent=gene-RM610_RS10450;Dbxref=GenBank:WP_105986683.1;Name=WP_105986683.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=RM610_RS10450;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_105986683.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 44201 45745 . + . ID=gene-RM610_RS10455;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=RM610_RS10455;old_locus_tag=RM610_10490 NZ_JAVRJX010000005.1 Protein Homology CDS 44201 45745 . + 0 ID=cds-WP_107359289.1;Parent=gene-RM610_RS10455;Dbxref=GenBank:WP_107359289.1;Name=WP_107359289.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509885.1;locus_tag=RM610_RS10455;product=sodium/proline symporter PutP;protein_id=WP_107359289.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 45842 47035 . - . ID=gene-RM610_RS10460;Name=RM610_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10460;old_locus_tag=RM610_10495 NZ_JAVRJX010000005.1 Protein Homology CDS 45842 47035 . - 0 ID=cds-WP_107359288.1;Parent=gene-RM610_RS10460;Dbxref=GenBank:WP_107359288.1;Name=WP_107359288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499947.1;locus_tag=RM610_RS10460;product=CamS family sex pheromone protein;protein_id=WP_107359288.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 47047 49050 . - . ID=gene-RM610_RS10465;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=RM610_RS10465;old_locus_tag=RM610_10500 NZ_JAVRJX010000005.1 Protein Homology CDS 47047 49050 . - 0 ID=cds-WP_311542299.1;Parent=gene-RM610_RS10465;Dbxref=GenBank:WP_311542299.1;Name=WP_311542299.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169343.1;locus_tag=RM610_RS10465;product=NAD-dependent DNA ligase LigA;protein_id=WP_311542299.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 49051 51240 . - . ID=gene-RM610_RS10470;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=RM610_RS10470;old_locus_tag=RM610_10505 NZ_JAVRJX010000005.1 Protein Homology CDS 49051 51240 . - 0 ID=cds-WP_311542300.1;Parent=gene-RM610_RS10470;Dbxref=GenBank:WP_311542300.1;Name=WP_311542300.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=RM610_RS10470;product=DNA helicase PcrA;protein_id=WP_311542300.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 51240 51929 . - . ID=gene-RM610_RS10475;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=RM610_RS10475;old_locus_tag=RM610_10510 NZ_JAVRJX010000005.1 Protein Homology CDS 51240 51929 . - 0 ID=cds-WP_107359285.1;Parent=gene-RM610_RS10475;Dbxref=GenBank:WP_107359285.1;Name=WP_107359285.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=RM610_RS10475;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_107359285.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 52089 52391 . - . ID=gene-RM610_RS10480;Name=RM610_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10480;old_locus_tag=RM610_10515 NZ_JAVRJX010000005.1 Protein Homology CDS 52089 52391 . - 0 ID=cds-WP_037575741.1;Parent=gene-RM610_RS10480;Dbxref=GenBank:WP_037575741.1;Name=WP_037575741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500616.1;locus_tag=RM610_RS10480;product=YerC/YecD family TrpR-related protein;protein_id=WP_037575741.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 52460 53755 . - . ID=gene-RM610_RS10485;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=RM610_RS10485;old_locus_tag=RM610_10520 NZ_JAVRJX010000005.1 Protein Homology CDS 52460 53755 . - 0 ID=cds-WP_311542301.1;Parent=gene-RM610_RS10485;Dbxref=GenBank:WP_311542301.1;Name=WP_311542301.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500617.1;locus_tag=RM610_RS10485;product=adenylosuccinate lyase;protein_id=WP_311542301.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 54020 54199 . - . ID=gene-RM610_RS10490;Name=RM610_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10490;old_locus_tag=RM610_10525 NZ_JAVRJX010000005.1 Protein Homology CDS 54020 54199 . - 0 ID=cds-WP_107359284.1;Parent=gene-RM610_RS10490;Dbxref=GenBank:WP_107359284.1;Name=WP_107359284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384058.1;locus_tag=RM610_RS10490;product=NETI motif-containing protein;protein_id=WP_107359284.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 54189 54758 . - . ID=gene-RM610_RS10495;Name=RM610_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10495;old_locus_tag=RM610_10530 NZ_JAVRJX010000005.1 Protein Homology CDS 54189 54758 . - 0 ID=cds-WP_107359283.1;Parent=gene-RM610_RS10495;Dbxref=GenBank:WP_107359283.1;Name=WP_107359283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=RM610_RS10495;product=DUF2179 domain-containing protein;protein_id=WP_107359283.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 54827 55648 . - . ID=gene-RM610_RS10500;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=RM610_RS10500;old_locus_tag=RM610_10535 NZ_JAVRJX010000005.1 Protein Homology CDS 54827 55648 . - 0 ID=cds-WP_107389475.1;Parent=gene-RM610_RS10500;Dbxref=GenBank:WP_107389475.1;Name=WP_107389475.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275346.1;locus_tag=RM610_RS10500;product=NAD(+) synthase;protein_id=WP_107389475.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 55641 57110 . - . ID=gene-RM610_RS10505;Name=RM610_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10505;old_locus_tag=RM610_10540 NZ_JAVRJX010000005.1 Protein Homology CDS 55641 57110 . - 0 ID=cds-WP_107359281.1;Parent=gene-RM610_RS10505;Dbxref=GenBank:WP_107359281.1;Name=WP_107359281.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=RM610_RS10505;product=nicotinate phosphoribosyltransferase;protein_id=WP_107359281.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 57271 58341 . + . ID=gene-RM610_RS10510;Name=RM610_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10510;old_locus_tag=RM610_10545 NZ_JAVRJX010000005.1 Protein Homology CDS 57271 58341 . + 0 ID=cds-WP_107359280.1;Parent=gene-RM610_RS10510;Dbxref=GenBank:WP_107359280.1;Name=WP_107359280.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=RM610_RS10510;product=nitric oxide synthase oxygenase;protein_id=WP_107359280.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 58385 59176 . + . ID=gene-RM610_RS10515;Name=RM610_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10515;old_locus_tag=RM610_10550 NZ_JAVRJX010000005.1 Protein Homology CDS 58385 59176 . + 0 ID=cds-WP_311542302.1;Parent=gene-RM610_RS10515;Dbxref=GenBank:WP_311542302.1;Name=WP_311542302.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804670.1;locus_tag=RM610_RS10515;product=prephenate dehydratase;protein_id=WP_311542302.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 59412 60515 . - . ID=gene-RM610_RS10520;Name=RM610_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10520;old_locus_tag=RM610_10555 NZ_JAVRJX010000005.1 Protein Homology CDS 59412 60515 . - 0 ID=cds-WP_311542303.1;Parent=gene-RM610_RS10520;Dbxref=GenBank:WP_311542303.1;Name=WP_311542303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425542.1;locus_tag=RM610_RS10520;product=glycosyl hydrolase family 28-related protein;protein_id=WP_311542303.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 60598 61149 . + . ID=gene-RM610_RS10525;Name=RM610_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10525;old_locus_tag=RM610_10560 NZ_JAVRJX010000005.1 Protein Homology CDS 60598 61149 . + 0 ID=cds-WP_037575718.1;Parent=gene-RM610_RS10525;Dbxref=GenBank:WP_037575718.1;Name=WP_037575718.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=RM610_RS10525;product=cysteine hydrolase family protein;protein_id=WP_037575718.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 61212 62135 . + . ID=gene-RM610_RS10530;Name=RM610_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10530;old_locus_tag=RM610_10565 NZ_JAVRJX010000005.1 Protein Homology CDS 61212 62135 . + 0 ID=cds-WP_311542304.1;Parent=gene-RM610_RS10530;Dbxref=GenBank:WP_311542304.1;Name=WP_311542304.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169330.1;locus_tag=RM610_RS10530;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_311542304.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 62155 62442 . + . ID=gene-RM610_RS10535;Name=RM610_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10535;old_locus_tag=RM610_10570 NZ_JAVRJX010000005.1 Protein Homology CDS 62155 62442 . + 0 ID=cds-WP_107375611.1;Parent=gene-RM610_RS10535;Dbxref=GenBank:WP_107375611.1;Name=WP_107375611.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384068.1;locus_tag=RM610_RS10535;product=GNAT family N-acetyltransferase;protein_id=WP_107375611.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 62642 64024 . + . ID=gene-RM610_RS10540;Name=RM610_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10540;old_locus_tag=RM610_10575 NZ_JAVRJX010000005.1 Protein Homology CDS 62642 64024 . + 0 ID=cds-WP_037575712.1;Parent=gene-RM610_RS10540;Dbxref=GenBank:WP_037575712.1;Name=WP_037575712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900735.1;locus_tag=RM610_RS10540;product=aldehyde dehydrogenase;protein_id=WP_037575712.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 64318 65358 . - . ID=gene-RM610_RS10545;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=RM610_RS10545;old_locus_tag=RM610_10580 NZ_JAVRJX010000005.1 Protein Homology CDS 64318 65358 . - 0 ID=cds-WP_311542305.1;Parent=gene-RM610_RS10545;Dbxref=GenBank:WP_311542305.1;Name=WP_311542305.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302748.1;locus_tag=RM610_RS10545;product=6-phosphogluconolactonase;protein_id=WP_311542305.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 65430 65999 . - . ID=gene-RM610_RS10550;Name=RM610_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10550;old_locus_tag=RM610_10585 NZ_JAVRJX010000005.1 GeneMarkS-2+ CDS 65430 65999 . - 0 ID=cds-WP_311542306.1;Parent=gene-RM610_RS10550;Dbxref=GenBank:WP_311542306.1;Name=WP_311542306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10550;product=hypothetical protein;protein_id=WP_311542306.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 66128 66301 . - . ID=gene-RM610_RS10555;Name=RM610_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10555;old_locus_tag=RM610_10590 NZ_JAVRJX010000005.1 Protein Homology CDS 66128 66301 . - 0 ID=cds-WP_165806299.1;Parent=gene-RM610_RS10555;Dbxref=GenBank:WP_165806299.1;Name=WP_165806299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461390.1;locus_tag=RM610_RS10555;product=hypothetical protein;protein_id=WP_165806299.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 66473 66856 . + . ID=gene-RM610_RS10560;Name=RM610_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10560;old_locus_tag=RM610_10595 NZ_JAVRJX010000005.1 Protein Homology CDS 66473 66856 . + 0 ID=cds-WP_107369845.1;Parent=gene-RM610_RS10560;Dbxref=GenBank:WP_107369845.1;Name=WP_107369845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=RM610_RS10560;product=hypothetical protein;protein_id=WP_107369845.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 67134 68174 . + . ID=gene-RM610_RS10565;Name=RM610_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10565;old_locus_tag=RM610_10600 NZ_JAVRJX010000005.1 Protein Homology CDS 67134 68174 . + 0 ID=cds-WP_311542307.1;Parent=gene-RM610_RS10565;Dbxref=GenBank:WP_311542307.1;Name=WP_311542307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188079.1;locus_tag=RM610_RS10565;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_311542307.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 68225 69067 . - . ID=gene-RM610_RS10570;Name=RM610_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10570;old_locus_tag=RM610_10605 NZ_JAVRJX010000005.1 Protein Homology CDS 68225 69067 . - 0 ID=cds-WP_311542308.1;Parent=gene-RM610_RS10570;Dbxref=GenBank:WP_311542308.1;Name=WP_311542308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024743.7;locus_tag=RM610_RS10570;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_311542308.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 69064 69627 . - . ID=gene-RM610_RS10575;Name=RM610_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10575;old_locus_tag=RM610_10610 NZ_JAVRJX010000005.1 Protein Homology CDS 69064 69627 . - 0 ID=cds-WP_311542309.1;Parent=gene-RM610_RS10575;Dbxref=GenBank:WP_311542309.1;Name=WP_311542309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=RM610_RS10575;product=HAAS signaling domain-containing protein;protein_id=WP_311542309.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 69814 70368 . + . ID=gene-RM610_RS10580;Name=RM610_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10580;old_locus_tag=RM610_10615 NZ_JAVRJX010000005.1 Protein Homology CDS 69814 70368 . + 0 ID=cds-WP_107369847.1;Parent=gene-RM610_RS10580;Dbxref=GenBank:WP_107369847.1;Name=WP_107369847.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170608.1;locus_tag=RM610_RS10580;product=thioredoxin family protein;protein_id=WP_107369847.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 70647 71060 . - . ID=gene-RM610_RS10585;Name=RM610_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10585;old_locus_tag=RM610_10620 NZ_JAVRJX010000005.1 Protein Homology CDS 70647 71060 . - 0 ID=cds-WP_107389476.1;Parent=gene-RM610_RS10585;Dbxref=GenBank:WP_107389476.1;Name=WP_107389476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=RM610_RS10585;product=DUF2188 domain-containing protein;protein_id=WP_107389476.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 71101 72462 . - . ID=gene-RM610_RS10590;Name=RM610_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10590;old_locus_tag=RM610_10625 NZ_JAVRJX010000005.1 Protein Homology CDS 71101 72462 . - 0 ID=cds-WP_107381742.1;Parent=gene-RM610_RS10590;Dbxref=GenBank:WP_107381742.1;Name=WP_107381742.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=RM610_RS10590;product=gluconate:H+ symporter;protein_id=WP_107381742.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 72477 74009 . - . ID=gene-RM610_RS10595;Name=RM610_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10595;old_locus_tag=RM610_10630 NZ_JAVRJX010000005.1 Protein Homology CDS 72477 74009 . - 0 ID=cds-WP_311542310.1;Parent=gene-RM610_RS10595;Dbxref=GenBank:WP_311542310.1;Name=WP_311542310.1;Ontology_term=GO:0016310,GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=phosphorylation|0016310||IEA,obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425556.1;locus_tag=RM610_RS10595;product=gluconokinase;protein_id=WP_311542310.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 74032 74706 . - . ID=gene-RM610_RS10600;Name=RM610_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10600;old_locus_tag=RM610_10635 NZ_JAVRJX010000005.1 Protein Homology CDS 74032 74706 . - 0 ID=cds-WP_107359264.1;Parent=gene-RM610_RS10600;Dbxref=GenBank:WP_107359264.1;Name=WP_107359264.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=RM610_RS10600;product=GntR family transcriptional regulator;protein_id=WP_107359264.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 74888 75616 . - . ID=gene-RM610_RS10605;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=RM610_RS10605;old_locus_tag=RM610_10640 NZ_JAVRJX010000005.1 Protein Homology CDS 74888 75616 . - 0 ID=cds-WP_107369851.1;Parent=gene-RM610_RS10605;Dbxref=GenBank:WP_107369851.1;Name=WP_107369851.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425558.1;locus_tag=RM610_RS10605;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_107369851.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 75616 76488 . - . ID=gene-RM610_RS10610;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=RM610_RS10610;old_locus_tag=RM610_10645 NZ_JAVRJX010000005.1 Protein Homology CDS 75616 76488 . - 0 ID=cds-WP_311542311.1;Parent=gene-RM610_RS10610;Dbxref=GenBank:WP_311542311.1;Name=WP_311542311.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466134.1;locus_tag=RM610_RS10610;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_311542311.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq pseudogene 77181 77550 . - . ID=gene-RM610_RS10615;Name=RM610_RS10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS10615;old_locus_tag=RM610_10650;pseudo=true NZ_JAVRJX010000005.1 Protein Homology CDS 77181 77550 . - 0 ID=cds-RM610_RS10615;Parent=gene-RM610_RS10615;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469536.1;locus_tag=RM610_RS10615;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 77782 77955 . - . ID=gene-RM610_RS10620;Name=RM610_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10620;old_locus_tag=RM610_10655 NZ_JAVRJX010000005.1 Protein Homology CDS 77782 77955 . - 0 ID=cds-WP_375712513.1;Parent=gene-RM610_RS10620;Dbxref=GenBank:WP_375712513.1;Name=WP_375712513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466152.1;locus_tag=RM610_RS10620;product=SE1626 family protein;protein_id=WP_375712513.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 78115 79404 . + . ID=gene-RM610_RS10625;Name=RM610_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10625;old_locus_tag=RM610_10660 NZ_JAVRJX010000005.1 Protein Homology CDS 78115 79404 . + 0 ID=cds-WP_107369852.1;Parent=gene-RM610_RS10625;Dbxref=GenBank:WP_107369852.1;Name=WP_107369852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=RM610_RS10625;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_107369852.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 79488 80303 . + . ID=gene-RM610_RS10630;Name=RM610_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10630;old_locus_tag=RM610_10665 NZ_JAVRJX010000005.1 Protein Homology CDS 79488 80303 . + 0 ID=cds-WP_311542312.1;Parent=gene-RM610_RS10630;Dbxref=GenBank:WP_311542312.1;Name=WP_311542312.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=RM610_RS10630;product=SPL family radical SAM protein;protein_id=WP_311542312.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 80318 80842 . + . ID=gene-RM610_RS10635;Name=RM610_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10635;old_locus_tag=RM610_10670 NZ_JAVRJX010000005.1 Protein Homology CDS 80318 80842 . + 0 ID=cds-WP_107381630.1;Parent=gene-RM610_RS10635;Dbxref=GenBank:WP_107381630.1;Name=WP_107381630.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425564.1;locus_tag=RM610_RS10635;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_107381630.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 80974 81417 . - . ID=gene-RM610_RS10640;Name=RM610_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10640;old_locus_tag=RM610_10675 NZ_JAVRJX010000005.1 Protein Homology CDS 80974 81417 . - 0 ID=cds-WP_311542313.1;Parent=gene-RM610_RS10640;Dbxref=GenBank:WP_311542313.1;Name=WP_311542313.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468210.1;locus_tag=RM610_RS10640;product=ASCH domain-containing protein;protein_id=WP_311542313.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq pseudogene 81853 82357 . + . ID=gene-RM610_RS10645;Name=RM610_RS10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS10645;old_locus_tag=RM610_10680;pseudo=true NZ_JAVRJX010000005.1 Protein Homology CDS 81853 82357 . + 0 ID=cds-RM610_RS10645;Parent=gene-RM610_RS10645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722219.1;locus_tag=RM610_RS10645;product=YagU family protein;pseudo=true;transl_table=11 NZ_JAVRJX010000005.1 RefSeq pseudogene 82448 82822 . + . ID=gene-RM610_RS12140;Name=RM610_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS12140;partial=true;pseudo=true;start_range=.,82448 NZ_JAVRJX010000005.1 Protein Homology CDS 82448 82822 . + 0 ID=cds-RM610_RS12140;Parent=gene-RM610_RS12140;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447504.1;locus_tag=RM610_RS12140;partial=true;product=YqxI family protein;pseudo=true;start_range=.,82448;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 82837 83229 . + . ID=gene-RM610_RS10650;Name=RM610_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10650;old_locus_tag=RM610_10685 NZ_JAVRJX010000005.1 Protein Homology CDS 82837 83229 . + 0 ID=cds-WP_107369854.1;Parent=gene-RM610_RS10650;Dbxref=GenBank:WP_107369854.1;Name=WP_107369854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501561.1;locus_tag=RM610_RS10650;product=hypothetical protein;protein_id=WP_107369854.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq pseudogene 83417 83579 . + . ID=gene-RM610_RS10655;Name=RM610_RS10655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS10655;old_locus_tag=RM610_10690;partial=true;pseudo=true;start_range=.,83417 NZ_JAVRJX010000005.1 Protein Homology CDS 83417 83579 . + 0 ID=cds-RM610_RS10655;Parent=gene-RM610_RS10655;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476300.1;locus_tag=RM610_RS10655;partial=true;product=site-specific integrase;pseudo=true;start_range=.,83417;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 83684 85303 . - . ID=gene-RM610_RS10660;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=RM610_RS10660;old_locus_tag=RM610_10695 NZ_JAVRJX010000005.1 Protein Homology CDS 83684 85303 . - 0 ID=cds-WP_037575682.1;Parent=gene-RM610_RS10660;Dbxref=GenBank:WP_037575682.1;Name=WP_037575682.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=RM610_RS10660;product=chaperonin GroEL;protein_id=WP_037575682.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 85373 85660 . - . ID=gene-RM610_RS10665;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=RM610_RS10665;old_locus_tag=RM610_10700 NZ_JAVRJX010000005.1 Protein Homology CDS 85373 85660 . - 0 ID=cds-WP_311542314.1;Parent=gene-RM610_RS10665;Dbxref=GenBank:WP_311542314.1;Name=WP_311542314.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=RM610_RS10665;product=co-chaperone GroES;protein_id=WP_311542314.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 85830 86582 . + . ID=gene-RM610_RS10670;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=RM610_RS10670;old_locus_tag=RM610_10705 NZ_JAVRJX010000005.1 Protein Homology CDS 85830 86582 . + 0 ID=cds-WP_311542315.1;Parent=gene-RM610_RS10670;Dbxref=GenBank:WP_311542315.1;Name=WP_311542315.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425570.1;locus_tag=RM610_RS10670;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_311542315.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 86660 87865 . - . ID=gene-RM610_RS10675;Name=RM610_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10675;old_locus_tag=RM610_10710 NZ_JAVRJX010000005.1 Protein Homology CDS 86660 87865 . - 0 ID=cds-WP_311542316.1;Parent=gene-RM610_RS10675;Dbxref=GenBank:WP_311542316.1;Name=WP_311542316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039170.1;locus_tag=RM610_RS10675;product=SdrH family protein;protein_id=WP_311542316.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 88045 88842 . + . ID=gene-RM610_RS10680;Name=RM610_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10680;old_locus_tag=RM610_10715 NZ_JAVRJX010000005.1 Protein Homology CDS 88045 88842 . + 0 ID=cds-WP_107369858.1;Parent=gene-RM610_RS10680;Dbxref=GenBank:WP_107369858.1;Name=WP_107369858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=RM610_RS10680;product=carbon-nitrogen family hydrolase;protein_id=WP_107369858.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 89490 90053 . + . ID=gene-RM610_RS10685;Name=RM610_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10685;old_locus_tag=RM610_10720 NZ_JAVRJX010000005.1 Protein Homology CDS 89490 90053 . + 0 ID=cds-WP_311542317.1;Parent=gene-RM610_RS10685;Dbxref=GenBank:WP_311542317.1;Name=WP_311542317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638096.1;locus_tag=RM610_RS10685;product=accessory gene regulator AgrB;protein_id=WP_311542317.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 90057 90191 . + . ID=gene-RM610_RS10690;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=RM610_RS10690;old_locus_tag=RM610_10725 NZ_JAVRJX010000005.1 Protein Homology CDS 90057 90191 . + 0 ID=cds-WP_107381457.1;Parent=gene-RM610_RS10690;Dbxref=GenBank:WP_107381457.1;Name=WP_107381457.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=RM610_RS10690;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_107381457.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 90223 91521 . + . ID=gene-RM610_RS12085;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=RM610_RS12085 NZ_JAVRJX010000005.1 Protein Homology CDS 90223 91521 . + 0 ID=cds-WP_107522455.1;Parent=gene-RM610_RS12085;Dbxref=GenBank:WP_107522455.1;Name=WP_107522455.1;gbkey=CDS;gene=agrC;inference=COORDINATES: protein motif:HMM:NF046015.1;locus_tag=RM610_RS12085;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_107522455.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 91536 92258 . + . ID=gene-RM610_RS10700;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=RM610_RS10700;old_locus_tag=RM610_10735 NZ_JAVRJX010000005.1 Protein Homology CDS 91536 92258 . + 0 ID=cds-WP_037575675.1;Parent=gene-RM610_RS10700;Dbxref=GenBank:WP_037575675.1;Name=WP_037575675.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=RM610_RS10700;product=quorum-sensing response regulator AgrA;protein_id=WP_037575675.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 92754 94238 . - . ID=gene-RM610_RS10705;Name=RM610_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10705;old_locus_tag=RM610_10740 NZ_JAVRJX010000005.1 Protein Homology CDS 92754 94238 . - 0 ID=cds-WP_311542318.1;Parent=gene-RM610_RS10705;Dbxref=GenBank:WP_311542318.1;Name=WP_311542318.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448284.1;locus_tag=RM610_RS10705;product=sucrose-6-phosphate hydrolase;protein_id=WP_311542318.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 94586 94810 . - . ID=gene-RM610_RS10710;Name=RM610_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10710;old_locus_tag=RM610_10745 NZ_JAVRJX010000005.1 Protein Homology CDS 94586 94810 . - 0 ID=cds-WP_037575670.1;Parent=gene-RM610_RS10710;Dbxref=GenBank:WP_037575670.1;Name=WP_037575670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=RM610_RS10710;product=sulfurtransferase TusA family protein;protein_id=WP_037575670.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 94832 95914 . - . ID=gene-RM610_RS10715;Name=RM610_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10715;old_locus_tag=RM610_10750 NZ_JAVRJX010000005.1 Protein Homology CDS 94832 95914 . - 0 ID=cds-WP_165885558.1;Parent=gene-RM610_RS10715;Dbxref=GenBank:WP_165885558.1;Name=WP_165885558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461425.1;locus_tag=RM610_RS10715;product=YeeE/YedE family protein;protein_id=WP_165885558.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 96086 96733 . - . ID=gene-RM610_RS10720;Name=RM610_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10720;old_locus_tag=RM610_10755 NZ_JAVRJX010000005.1 Protein Homology CDS 96086 96733 . - 0 ID=cds-WP_107359698.1;Parent=gene-RM610_RS10720;Dbxref=GenBank:WP_107359698.1;Name=WP_107359698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166397.1;locus_tag=RM610_RS10720;product=redox-sensing transcriptional repressor Rex;protein_id=WP_107359698.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 97019 98959 . + . ID=gene-RM610_RS10725;Name=RM610_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10725;old_locus_tag=RM610_10760 NZ_JAVRJX010000005.1 Protein Homology CDS 97019 98959 . + 0 ID=cds-WP_311542319.1;Parent=gene-RM610_RS10725;Dbxref=GenBank:WP_311542319.1;Name=WP_311542319.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425581.1;locus_tag=RM610_RS10725;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_311542319.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 99285 100019 . + . ID=gene-RM610_RS10730;Name=RM610_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10730;old_locus_tag=RM610_10765 NZ_JAVRJX010000005.1 GeneMarkS-2+ CDS 99285 100019 . + 0 ID=cds-WP_311542320.1;Parent=gene-RM610_RS10730;Dbxref=GenBank:WP_311542320.1;Name=WP_311542320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS10730;product=hypothetical protein;protein_id=WP_311542320.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 100193 100906 . + . ID=gene-RM610_RS10735;Name=RM610_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10735;old_locus_tag=RM610_10770 NZ_JAVRJX010000005.1 Protein Homology CDS 100193 100906 . + 0 ID=cds-WP_311542323.1;Parent=gene-RM610_RS10735;Dbxref=GenBank:WP_311542323.1;Name=WP_311542323.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:NF012700.7;locus_tag=RM610_RS10735;product=MutS-related protein;protein_id=WP_311542323.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 100928 101947 . - . ID=gene-RM610_RS10740;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=RM610_RS10740;old_locus_tag=RM610_10775 NZ_JAVRJX010000005.1 Protein Homology CDS 100928 101947 . - 0 ID=cds-WP_107359695.1;Parent=gene-RM610_RS10740;Dbxref=GenBank:WP_107359695.1;Name=WP_107359695.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=RM610_RS10740;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_107359695.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 101944 102366 . - . ID=gene-RM610_RS10745;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=RM610_RS10745;old_locus_tag=RM610_10780 NZ_JAVRJX010000005.1 Protein Homology CDS 101944 102366 . - 0 ID=cds-WP_375712514.1;Parent=gene-RM610_RS10745;Dbxref=GenBank:WP_375712514.1;Name=WP_375712514.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466250.1;locus_tag=RM610_RS10745;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_375712514.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 102378 103043 . - . ID=gene-RM610_RS10750;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=RM610_RS10750;old_locus_tag=RM610_10785 NZ_JAVRJX010000005.1 Protein Homology CDS 102378 103043 . - 0 ID=cds-WP_107359693.1;Parent=gene-RM610_RS10750;Dbxref=GenBank:WP_107359693.1;Name=WP_107359693.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050718.1;locus_tag=RM610_RS10750;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_107359693.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 103036 103485 . - . ID=gene-RM610_RS10755;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=RM610_RS10755;old_locus_tag=RM610_10790 NZ_JAVRJX010000005.1 Protein Homology CDS 103036 103485 . - 0 ID=cds-WP_107359692.1;Parent=gene-RM610_RS10755;Dbxref=GenBank:WP_107359692.1;Name=WP_107359692.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590797.1;locus_tag=RM610_RS10755;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_107359692.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 103905 105593 . + . ID=gene-RM610_RS10760;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=RM610_RS10760;old_locus_tag=RM610_10795 NZ_JAVRJX010000005.1 Protein Homology CDS 103905 105593 . + 0 ID=cds-WP_107359691.1;Parent=gene-RM610_RS10760;Dbxref=GenBank:WP_107359691.1;Name=WP_107359691.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=RM610_RS10760;product=dihydroxy-acid dehydratase;protein_id=WP_107359691.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 105611 107365 . + . ID=gene-RM610_RS10765;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=RM610_RS10765;old_locus_tag=RM610_10800 NZ_JAVRJX010000005.1 Protein Homology CDS 105611 107365 . + 0 ID=cds-WP_119524016.1;Parent=gene-RM610_RS10765;Dbxref=GenBank:WP_119524016.1;Name=WP_119524016.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275287.1;locus_tag=RM610_RS10765;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_119524016.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 107362 107835 . + . ID=gene-RM610_RS10770;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=RM610_RS10770;old_locus_tag=RM610_10805 NZ_JAVRJX010000005.1 Protein Homology CDS 107362 107835 . + 0 ID=cds-WP_107359689.1;Parent=gene-RM610_RS10770;Dbxref=GenBank:WP_107359689.1;Name=WP_107359689.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=RM610_RS10770;product=acetolactate synthase small subunit;protein_id=WP_107359689.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 107854 108873 . + . ID=gene-RM610_RS10775;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=RM610_RS10775;old_locus_tag=RM610_10810 NZ_JAVRJX010000005.1 Protein Homology CDS 107854 108873 . + 0 ID=cds-WP_107369870.1;Parent=gene-RM610_RS10775;Dbxref=GenBank:WP_107369870.1;Name=WP_107369870.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825891.1;locus_tag=RM610_RS10775;product=ketol-acid reductoisomerase;protein_id=WP_107369870.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 108906 110441 . + . ID=gene-RM610_RS10780;Name=RM610_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10780;old_locus_tag=RM610_10815 NZ_JAVRJX010000005.1 Protein Homology CDS 108906 110441 . + 0 ID=cds-WP_107359687.1;Parent=gene-RM610_RS10780;Dbxref=GenBank:WP_107359687.1;Name=WP_107359687.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275284.1;locus_tag=RM610_RS10780;product=2-isopropylmalate synthase;protein_id=WP_107359687.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 110438 111487 . + . ID=gene-RM610_RS10785;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=RM610_RS10785;old_locus_tag=RM610_10820 NZ_JAVRJX010000005.1 Protein Homology CDS 110438 111487 . + 0 ID=cds-WP_107369872.1;Parent=gene-RM610_RS10785;Dbxref=GenBank:WP_107369872.1;Name=WP_107369872.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=RM610_RS10785;product=3-isopropylmalate dehydrogenase;protein_id=WP_107369872.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 111491 112861 . + . ID=gene-RM610_RS10790;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=RM610_RS10790;old_locus_tag=RM610_10825 NZ_JAVRJX010000005.1 Protein Homology CDS 111491 112861 . + 0 ID=cds-WP_311542321.1;Parent=gene-RM610_RS10790;Dbxref=GenBank:WP_311542321.1;Name=WP_311542321.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384293.1;locus_tag=RM610_RS10790;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_311542321.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 112863 113435 . + . ID=gene-RM610_RS10795;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=RM610_RS10795;old_locus_tag=RM610_10830 NZ_JAVRJX010000005.1 Protein Homology CDS 112863 113435 . + 0 ID=cds-WP_107381482.1;Parent=gene-RM610_RS10795;Dbxref=GenBank:WP_107381482.1;Name=WP_107381482.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384295.1;locus_tag=RM610_RS10795;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_107381482.1;transl_table=11 NZ_JAVRJX010000005.1 RefSeq gene 113449 114717 . + . ID=gene-RM610_RS10800;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=RM610_RS10800;old_locus_tag=RM610_10835 NZ_JAVRJX010000005.1 Protein Homology CDS 113449 114717 . + 0 ID=cds-WP_311542322.1;Parent=gene-RM610_RS10800;Dbxref=GenBank:WP_311542322.1;Name=WP_311542322.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466255.1;locus_tag=RM610_RS10800;product=threonine ammonia-lyase IlvA;protein_id=WP_311542322.1;transl_table=11 ##sequence-region NZ_JAVRJX010000006.1 1 65583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000006.1 RefSeq region 1 65583 . + . ID=NZ_JAVRJX010000006.1:1..65583;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000006.1 RefSeq gene 122 589 . - . ID=gene-RM610_RS10805;Name=RM610_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10805;old_locus_tag=RM610_10840 NZ_JAVRJX010000006.1 Protein Homology CDS 122 589 . - 0 ID=cds-WP_107359364.1;Parent=gene-RM610_RS10805;Dbxref=GenBank:WP_107359364.1;Name=WP_107359364.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=RM610_RS10805;product=S-ribosylhomocysteine lyase;protein_id=WP_107359364.1;transl_table=11 NZ_JAVRJX010000006.1 cmsearch riboswitch 814 924 . + . ID=id-NZ_JAVRJX010000006.1:814..924;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000006.1 RefSeq gene 1019 2203 . + . ID=gene-RM610_RS10810;Name=RM610_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10810;old_locus_tag=RM610_10845 NZ_JAVRJX010000006.1 Protein Homology CDS 1019 2203 . + 0 ID=cds-WP_107376141.1;Parent=gene-RM610_RS10810;Dbxref=GenBank:WP_107376141.1;Name=WP_107376141.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426424.1;locus_tag=RM610_RS10810;product=M20 family metallopeptidase;protein_id=WP_107376141.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 2204 3385 . + . ID=gene-RM610_RS10815;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=RM610_RS10815;old_locus_tag=RM610_10850 NZ_JAVRJX010000006.1 Protein Homology CDS 2204 3385 . + 0 ID=cds-WP_107359363.1;Parent=gene-RM610_RS10815;Dbxref=GenBank:WP_107359363.1;Name=WP_107359363.1;Ontology_term=GO:0006555,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435869.1;locus_tag=RM610_RS10815;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_107359363.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 3476 4147 . + . ID=gene-RM610_RS10820;Name=RM610_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10820;old_locus_tag=RM610_10855 NZ_JAVRJX010000006.1 Protein Homology CDS 3476 4147 . + 0 ID=cds-WP_107359362.1;Parent=gene-RM610_RS10820;Dbxref=GenBank:WP_107359362.1;Name=WP_107359362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120545.1;locus_tag=RM610_RS10820;product=DUF2750 domain-containing protein;protein_id=WP_107359362.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 4322 5119 . - . ID=gene-RM610_RS10825;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=RM610_RS10825;old_locus_tag=RM610_10860 NZ_JAVRJX010000006.1 Protein Homology CDS 4322 5119 . - 0 ID=cds-WP_107369674.1;Parent=gene-RM610_RS10825;Dbxref=GenBank:WP_107369674.1;Name=WP_107369674.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368283.1;locus_tag=RM610_RS10825;product=type II pantothenate kinase;protein_id=WP_107369674.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 5226 5594 . + . ID=gene-RM610_RS10830;Name=RM610_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10830;old_locus_tag=RM610_10865 NZ_JAVRJX010000006.1 Protein Homology CDS 5226 5594 . + 0 ID=cds-WP_107380994.1;Parent=gene-RM610_RS10830;Dbxref=GenBank:WP_107380994.1;Name=WP_107380994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165783.1;locus_tag=RM610_RS10830;product=VOC family protein;protein_id=WP_107380994.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 5637 7238 . - . ID=gene-RM610_RS10835;Name=RM610_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10835;old_locus_tag=RM610_10870 NZ_JAVRJX010000006.1 Protein Homology CDS 5637 7238 . - 0 ID=cds-WP_107376146.1;Parent=gene-RM610_RS10835;Dbxref=GenBank:WP_107376146.1;Name=WP_107376146.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=RM610_RS10835;product=BCCT family transporter;protein_id=WP_107376146.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 7326 8186 . + . ID=gene-RM610_RS10840;Name=RM610_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10840;old_locus_tag=RM610_10875 NZ_JAVRJX010000006.1 Protein Homology CDS 7326 8186 . + 0 ID=cds-WP_107380992.1;Parent=gene-RM610_RS10840;Dbxref=GenBank:WP_107380992.1;Name=WP_107380992.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=RM610_RS10840;product=GNAT family N-acetyltransferase;protein_id=WP_107380992.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 8355 8888 . + . ID=gene-RM610_RS10845;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=RM610_RS10845;old_locus_tag=RM610_10880 NZ_JAVRJX010000006.1 Protein Homology CDS 8355 8888 . + 0 ID=cds-WP_107359357.1;Parent=gene-RM610_RS10845;Dbxref=GenBank:WP_107359357.1;Name=WP_107359357.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=RM610_RS10845;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_107359357.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 9284 10891 . + . ID=gene-RM610_RS10850;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=RM610_RS10850;old_locus_tag=RM610_10885 NZ_JAVRJX010000006.1 Protein Homology CDS 9284 10891 . + 0 ID=cds-WP_107376147.1;Parent=gene-RM610_RS10850;Dbxref=GenBank:WP_107376147.1;Name=WP_107376147.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500844.1;locus_tag=RM610_RS10850;product=CTP synthase;protein_id=WP_107376147.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 11463 11984 . - . ID=gene-RM610_RS10855;Name=RM610_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10855;old_locus_tag=RM610_10890 NZ_JAVRJX010000006.1 Protein Homology CDS 11463 11984 . - 0 ID=cds-WP_107380991.1;Parent=gene-RM610_RS10855;Dbxref=GenBank:WP_107380991.1;Name=WP_107380991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808089.1;locus_tag=RM610_RS10855;product=DUF2529 family protein;protein_id=WP_107380991.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 12201 13073 . + . ID=gene-RM610_RS10860;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=RM610_RS10860;old_locus_tag=RM610_10895 NZ_JAVRJX010000006.1 Protein Homology CDS 12201 13073 . + 0 ID=cds-WP_037576564.1;Parent=gene-RM610_RS10860;Dbxref=GenBank:WP_037576564.1;Name=WP_037576564.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=RM610_RS10860;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_037576564.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 13316 14581 . + . ID=gene-RM610_RS10865;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=RM610_RS10865;old_locus_tag=RM610_10900 NZ_JAVRJX010000006.1 Protein Homology CDS 13316 14581 . + 0 ID=cds-WP_107376049.1;Parent=gene-RM610_RS10865;Dbxref=GenBank:WP_107376049.1;Name=WP_107376049.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=RM610_RS10865;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_107376049.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 14630 14956 . + . ID=gene-RM610_RS10870;Name=RM610_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10870;old_locus_tag=RM610_10905 NZ_JAVRJX010000006.1 Protein Homology CDS 14630 14956 . + 0 ID=cds-WP_107380990.1;Parent=gene-RM610_RS10870;Dbxref=GenBank:WP_107380990.1;Name=WP_107380990.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165793.1;locus_tag=RM610_RS10870;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_107380990.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 15699 17129 . + . ID=gene-RM610_RS10875;Name=RM610_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10875;old_locus_tag=RM610_10910 NZ_JAVRJX010000006.1 Protein Homology CDS 15699 17129 . + 0 ID=cds-WP_107380989.1;Parent=gene-RM610_RS10875;Dbxref=GenBank:WP_107380989.1;Name=WP_107380989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=RM610_RS10875;product=aldehyde dehydrogenase family protein;protein_id=WP_107380989.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 17313 18629 . + . ID=gene-RM610_RS10880;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=RM610_RS10880;old_locus_tag=RM610_10915 NZ_JAVRJX010000006.1 Protein Homology CDS 17313 18629 . + 0 ID=cds-WP_037576574.1;Parent=gene-RM610_RS10880;Dbxref=GenBank:WP_037576574.1;Name=WP_037576574.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=RM610_RS10880;product=transcription termination factor Rho;protein_id=WP_037576574.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 18751 19005 . + . ID=gene-RM610_RS10885;Name=RM610_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10885;old_locus_tag=RM610_10920 NZ_JAVRJX010000006.1 Protein Homology CDS 18751 19005 . + 0 ID=cds-WP_037576577.1;Parent=gene-RM610_RS10885;Dbxref=GenBank:WP_037576577.1;Name=WP_037576577.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=RM610_RS10885;product=type B 50S ribosomal protein L31;protein_id=WP_037576577.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 19236 19832 . + . ID=gene-RM610_RS10890;Name=RM610_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10890;old_locus_tag=RM610_10925 NZ_JAVRJX010000006.1 Protein Homology CDS 19236 19832 . + 0 ID=cds-WP_107359352.1;Parent=gene-RM610_RS10890;Dbxref=GenBank:WP_107359352.1;Name=WP_107359352.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=RM610_RS10890;product=thymidine kinase;protein_id=WP_107359352.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 19836 20912 . + . ID=gene-RM610_RS10895;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=RM610_RS10895;old_locus_tag=RM610_10930 NZ_JAVRJX010000006.1 Protein Homology CDS 19836 20912 . + 0 ID=cds-WP_311542324.1;Parent=gene-RM610_RS10895;Dbxref=GenBank:WP_311542324.1;Name=WP_311542324.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=RM610_RS10895;product=peptide chain release factor 1;protein_id=WP_311542324.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 20902 21744 . + . ID=gene-RM610_RS10900;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=RM610_RS10900;old_locus_tag=RM610_10935 NZ_JAVRJX010000006.1 Protein Homology CDS 20902 21744 . + 0 ID=cds-WP_107369669.1;Parent=gene-RM610_RS10900;Dbxref=GenBank:WP_107369669.1;Name=WP_107369669.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=RM610_RS10900;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_107369669.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 21832 22881 . + . ID=gene-RM610_RS10905;Name=RM610_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10905;old_locus_tag=RM610_10940 NZ_JAVRJX010000006.1 Protein Homology CDS 21832 22881 . + 0 ID=cds-WP_182472240.1;Parent=gene-RM610_RS10905;Dbxref=GenBank:WP_182472240.1;Name=WP_182472240.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275230.1;locus_tag=RM610_RS10905;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_182472240.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 22878 23297 . + . ID=gene-RM610_RS10910;Name=RM610_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10910;old_locus_tag=RM610_10945 NZ_JAVRJX010000006.1 Protein Homology CDS 22878 23297 . + 0 ID=cds-WP_107376054.1;Parent=gene-RM610_RS10910;Dbxref=GenBank:WP_107376054.1;Name=WP_107376054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453715.1;locus_tag=RM610_RS10910;product=low molecular weight protein arginine phosphatase;protein_id=WP_107376054.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 23422 23949 . + . ID=gene-RM610_RS10915;Name=RM610_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10915;old_locus_tag=RM610_10950 NZ_JAVRJX010000006.1 Protein Homology CDS 23422 23949 . + 0 ID=cds-WP_107359347.1;Parent=gene-RM610_RS10915;Dbxref=GenBank:WP_107359347.1;Name=WP_107359347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=RM610_RS10915;product=TIGR01440 family protein;protein_id=WP_107359347.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 23972 25210 . + . ID=gene-RM610_RS10920;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=RM610_RS10920;old_locus_tag=RM610_10955 NZ_JAVRJX010000006.1 Protein Homology CDS 23972 25210 . + 0 ID=cds-WP_311542325.1;Parent=gene-RM610_RS10920;Dbxref=GenBank:WP_311542325.1;Name=WP_311542325.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507071.1;locus_tag=RM610_RS10920;product=serine hydroxymethyltransferase;protein_id=WP_311542325.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 25233 25862 . + . ID=gene-RM610_RS10925;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=RM610_RS10925;old_locus_tag=RM610_10960 NZ_JAVRJX010000006.1 Protein Homology CDS 25233 25862 . + 0 ID=cds-WP_037576594.1;Parent=gene-RM610_RS10925;Dbxref=GenBank:WP_037576594.1;Name=WP_037576594.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=RM610_RS10925;product=uracil phosphoribosyltransferase;protein_id=WP_037576594.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 25890 27029 . + . ID=gene-RM610_RS10930;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM610_RS10930;old_locus_tag=RM610_10965 NZ_JAVRJX010000006.1 Protein Homology CDS 25890 27029 . + 0 ID=cds-WP_311542326.1;Parent=gene-RM610_RS10930;Dbxref=GenBank:WP_311542326.1;Name=WP_311542326.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912263.1;locus_tag=RM610_RS10930;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_311542326.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 27256 27552 . + . ID=gene-RM610_RS10935;Name=RM610_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10935;old_locus_tag=RM610_10970 NZ_JAVRJX010000006.1 Protein Homology CDS 27256 27552 . + 0 ID=cds-WP_229717321.1;Parent=gene-RM610_RS10935;Dbxref=GenBank:WP_229717321.1;Name=WP_229717321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=RM610_RS10935;product=hypothetical protein;protein_id=WP_229717321.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 27572 28291 . + . ID=gene-RM610_RS10940;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=RM610_RS10940;old_locus_tag=RM610_10975 NZ_JAVRJX010000006.1 Protein Homology CDS 27572 28291 . + 0 ID=cds-WP_107359343.1;Parent=gene-RM610_RS10940;Dbxref=GenBank:WP_107359343.1;Name=WP_107359343.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829936.1;locus_tag=RM610_RS10940;product=F0F1 ATP synthase subunit A;protein_id=WP_107359343.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 28334 28546 . + . ID=gene-RM610_RS10945;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=RM610_RS10945;old_locus_tag=RM610_10980 NZ_JAVRJX010000006.1 Protein Homology CDS 28334 28546 . + 0 ID=cds-WP_037576605.1;Parent=gene-RM610_RS10945;Dbxref=GenBank:WP_037576605.1;Name=WP_037576605.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478963.1;locus_tag=RM610_RS10945;product=F0F1 ATP synthase subunit C;protein_id=WP_037576605.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 28820 29326 . + . ID=gene-RM610_RS10950;Name=RM610_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10950;old_locus_tag=RM610_10985 NZ_JAVRJX010000006.1 Protein Homology CDS 28820 29326 . + 0 ID=cds-WP_037576642.1;Parent=gene-RM610_RS10950;Dbxref=GenBank:WP_037576642.1;Name=WP_037576642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461233.1;locus_tag=RM610_RS10950;product=F0F1 ATP synthase subunit B;protein_id=WP_037576642.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 29326 29865 . + . ID=gene-RM610_RS10955;Name=RM610_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10955;old_locus_tag=RM610_10990 NZ_JAVRJX010000006.1 Protein Homology CDS 29326 29865 . + 0 ID=cds-WP_037576608.1;Parent=gene-RM610_RS10955;Dbxref=GenBank:WP_037576608.1;Name=WP_037576608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165805.1;locus_tag=RM610_RS10955;product=F0F1 ATP synthase subunit delta;protein_id=WP_037576608.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 29893 31401 . + . ID=gene-RM610_RS10960;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=RM610_RS10960;old_locus_tag=RM610_10995 NZ_JAVRJX010000006.1 Protein Homology CDS 29893 31401 . + 0 ID=cds-WP_037576611.1;Parent=gene-RM610_RS10960;Dbxref=GenBank:WP_037576611.1;Name=WP_037576611.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500822.1;locus_tag=RM610_RS10960;product=F0F1 ATP synthase subunit alpha;protein_id=WP_037576611.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 31433 32299 . + . ID=gene-RM610_RS10965;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=RM610_RS10965;old_locus_tag=RM610_11000 NZ_JAVRJX010000006.1 Protein Homology CDS 31433 32299 . + 0 ID=cds-WP_037576613.1;Parent=gene-RM610_RS10965;Dbxref=GenBank:WP_037576613.1;Name=WP_037576613.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157596.1;locus_tag=RM610_RS10965;product=ATP synthase F1 subunit gamma;protein_id=WP_037576613.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 32324 33736 . + . ID=gene-RM610_RS10970;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=RM610_RS10970;old_locus_tag=RM610_11005 NZ_JAVRJX010000006.1 Protein Homology CDS 32324 33736 . + 0 ID=cds-WP_037576616.1;Parent=gene-RM610_RS10970;Dbxref=GenBank:WP_037576616.1;Name=WP_037576616.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=RM610_RS10970;product=F0F1 ATP synthase subunit beta;protein_id=WP_037576616.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 33758 34162 . + . ID=gene-RM610_RS10975;Name=RM610_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10975;old_locus_tag=RM610_11010 NZ_JAVRJX010000006.1 Protein Homology CDS 33758 34162 . + 0 ID=cds-WP_103159247.1;Parent=gene-RM610_RS10975;Dbxref=GenBank:WP_103159247.1;Name=WP_103159247.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275244.1;locus_tag=RM610_RS10975;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_103159247.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 34413 34646 . + . ID=gene-RM610_RS10980;Name=RM610_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10980;old_locus_tag=RM610_11015 NZ_JAVRJX010000006.1 Protein Homology CDS 34413 34646 . + 0 ID=cds-WP_037576621.1;Parent=gene-RM610_RS10980;Dbxref=GenBank:WP_037576621.1;Name=WP_037576621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384524.1;locus_tag=RM610_RS10980;product=DUF1146 family protein;protein_id=WP_037576621.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 34729 36000 . + . ID=gene-RM610_RS10985;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=RM610_RS10985;old_locus_tag=RM610_11020 NZ_JAVRJX010000006.1 Protein Homology CDS 34729 36000 . + 0 ID=cds-WP_311542327.1;Parent=gene-RM610_RS10985;Dbxref=GenBank:WP_311542327.1;Name=WP_311542327.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302683.1;locus_tag=RM610_RS10985;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_311542327.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 36190 36630 . + . ID=gene-RM610_RS10990;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=RM610_RS10990;old_locus_tag=RM610_11025 NZ_JAVRJX010000006.1 Protein Homology CDS 36190 36630 . + 0 ID=cds-WP_037576630.1;Parent=gene-RM610_RS10990;Dbxref=GenBank:WP_037576630.1;Name=WP_037576630.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471640.1;locus_tag=RM610_RS10990;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_037576630.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 36660 37100 . - . ID=gene-RM610_RS10995;Name=RM610_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS10995;old_locus_tag=RM610_11030 NZ_JAVRJX010000006.1 Protein Homology CDS 36660 37100 . - 0 ID=cds-WP_037577213.1;Parent=gene-RM610_RS10995;Dbxref=GenBank:WP_037577213.1;Name=WP_037577213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722099.1;locus_tag=RM610_RS10995;product=YwpF-like family protein;protein_id=WP_037577213.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 37289 37606 . + . ID=gene-RM610_RS11000;Name=RM610_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11000;old_locus_tag=RM610_11035 NZ_JAVRJX010000006.1 Protein Homology CDS 37289 37606 . + 0 ID=cds-WP_311542328.1;Parent=gene-RM610_RS11000;Dbxref=GenBank:WP_311542328.1;Name=WP_311542328.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426463.1;locus_tag=RM610_RS11000;product=single-stranded DNA-binding protein;protein_id=WP_311542328.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 38074 38880 . + . ID=gene-RM610_RS11005;Name=RM610_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11005;old_locus_tag=RM610_11040 NZ_JAVRJX010000006.1 Protein Homology CDS 38074 38880 . + 0 ID=cds-WP_311542329.1;Parent=gene-RM610_RS11005;Dbxref=GenBank:WP_311542329.1;Name=WP_311542329.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274811.1;locus_tag=RM610_RS11005;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311542329.1;transl_table=11 NZ_JAVRJX010000006.1 cmsearch riboswitch 39007 39106 . + . ID=id-NZ_JAVRJX010000006.1:39007..39106;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJX010000006.1 RefSeq gene 39169 39849 . + . ID=gene-RM610_RS11010;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=RM610_RS11010;old_locus_tag=RM610_11045 NZ_JAVRJX010000006.1 Protein Homology CDS 39169 39849 . + 0 ID=cds-WP_107376030.1;Parent=gene-RM610_RS11010;Dbxref=GenBank:WP_107376030.1;Name=WP_107376030.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999712.1;locus_tag=RM610_RS11010;product=thiaminase II;protein_id=WP_107376030.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 39851 40657 . + . ID=gene-RM610_RS11015;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM610_RS11015;old_locus_tag=RM610_11050 NZ_JAVRJX010000006.1 Protein Homology CDS 39851 40657 . + 0 ID=cds-WP_311542330.1;Parent=gene-RM610_RS11015;Dbxref=GenBank:WP_311542330.1;Name=WP_311542330.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=RM610_RS11015;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_311542330.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 40659 41447 . + . ID=gene-RM610_RS11020;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=RM610_RS11020;old_locus_tag=RM610_11055 NZ_JAVRJX010000006.1 Protein Homology CDS 40659 41447 . + 0 ID=cds-WP_107369656.1;Parent=gene-RM610_RS11020;Dbxref=GenBank:WP_107369656.1;Name=WP_107369656.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175143.1;locus_tag=RM610_RS11020;product=hydroxyethylthiazole kinase;protein_id=WP_107369656.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 41452 42090 . + . ID=gene-RM610_RS11025;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=RM610_RS11025;old_locus_tag=RM610_11060 NZ_JAVRJX010000006.1 Protein Homology CDS 41452 42090 . + 0 ID=cds-WP_311542331.1;Parent=gene-RM610_RS11025;Dbxref=GenBank:WP_311542331.1;Name=WP_311542331.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165814.1;locus_tag=RM610_RS11025;product=thiamine phosphate synthase;protein_id=WP_311542331.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 42179 43045 . + . ID=gene-RM610_RS11030;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM610_RS11030;old_locus_tag=RM610_11065 NZ_JAVRJX010000006.1 Protein Homology CDS 42179 43045 . + 0 ID=cds-WP_103159256.1;Parent=gene-RM610_RS11030;Dbxref=GenBank:WP_103159256.1;Name=WP_103159256.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500806.1;locus_tag=RM610_RS11030;product=membrane protein insertase YidC;protein_id=WP_103159256.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 43097 43687 . - . ID=gene-RM610_RS11035;Name=RM610_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11035;old_locus_tag=RM610_11070 NZ_JAVRJX010000006.1 Protein Homology CDS 43097 43687 . - 0 ID=cds-WP_107369677.1;Parent=gene-RM610_RS11035;Dbxref=GenBank:WP_107369677.1;Name=WP_107369677.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187612.1;locus_tag=RM610_RS11035;product=HD domain-containing protein;protein_id=WP_107369677.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 43735 45225 . - . ID=gene-RM610_RS11040;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM610_RS11040;old_locus_tag=RM610_11075 NZ_JAVRJX010000006.1 Protein Homology CDS 43735 45225 . - 0 ID=cds-WP_107359334.1;Parent=gene-RM610_RS11040;Dbxref=GenBank:WP_107359334.1;Name=WP_107359334.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455067.1;locus_tag=RM610_RS11040;product=cardiolipin synthase;protein_id=WP_107359334.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 45362 45649 . + . ID=gene-RM610_RS11045;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=RM610_RS11045;old_locus_tag=RM610_11080 NZ_JAVRJX010000006.1 Protein Homology CDS 45362 45649 . + 0 ID=cds-WP_037577199.1;Parent=gene-RM610_RS11045;Dbxref=GenBank:WP_037577199.1;Name=WP_037577199.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169315.1;locus_tag=RM610_RS11045;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_037577199.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 45662 45886 . + . ID=gene-RM610_RS11050;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=RM610_RS11050;old_locus_tag=RM610_11085 NZ_JAVRJX010000006.1 Protein Homology CDS 45662 45886 . + 0 ID=cds-WP_107359333.1;Parent=gene-RM610_RS11050;Dbxref=GenBank:WP_107359333.1;Name=WP_107359333.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426475.1;locus_tag=RM610_RS11050;product=putative copper chaperone CsoZ;protein_id=WP_107359333.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 45888 46091 . + . ID=gene-RM610_RS11055;Name=RM610_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11055;old_locus_tag=RM610_11090 NZ_JAVRJX010000006.1 Protein Homology CDS 45888 46091 . + 0 ID=cds-WP_107376034.1;Parent=gene-RM610_RS11055;Dbxref=GenBank:WP_107376034.1;Name=WP_107376034.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426476.1;locus_tag=RM610_RS11055;product=heavy-metal-associated domain-containing protein;protein_id=WP_107376034.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 46231 48411 . + . ID=gene-RM610_RS11060;Name=RM610_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11060;old_locus_tag=RM610_11095 NZ_JAVRJX010000006.1 Protein Homology CDS 46231 48411 . + 0 ID=cds-WP_311542332.1;Parent=gene-RM610_RS11060;Dbxref=GenBank:WP_311542332.1;Name=WP_311542332.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426477.1;locus_tag=RM610_RS11060;product=heavy metal translocating P-type ATPase;protein_id=WP_311542332.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 48497 48637 . + . ID=gene-RM610_RS11065;Name=RM610_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11065;old_locus_tag=RM610_11100 NZ_JAVRJX010000006.1 Protein Homology CDS 48497 48637 . + 0 ID=cds-WP_086375151.1;Parent=gene-RM610_RS11065;Dbxref=GenBank:WP_086375151.1;Name=WP_086375151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507098.1;locus_tag=RM610_RS11065;product=Lmo0850 family protein;protein_id=WP_086375151.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 48811 50022 . - . ID=gene-RM610_RS11070;Name=RM610_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11070;old_locus_tag=RM610_11105 NZ_JAVRJX010000006.1 Protein Homology CDS 48811 50022 . - 0 ID=cds-WP_107359330.1;Parent=gene-RM610_RS11070;Dbxref=GenBank:WP_107359330.1;Name=WP_107359330.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169256.1;locus_tag=RM610_RS11070;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_107359330.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 50183 51256 . + . ID=gene-RM610_RS11075;Name=RM610_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11075;old_locus_tag=RM610_11110 NZ_JAVRJX010000006.1 Protein Homology CDS 50183 51256 . + 0 ID=cds-WP_107376037.1;Parent=gene-RM610_RS11075;Dbxref=GenBank:WP_107376037.1;Name=WP_107376037.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=RM610_RS11075;product=D-alanine--D-alanine ligase;protein_id=WP_107376037.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 51265 52629 . + . ID=gene-RM610_RS11080;Name=RM610_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11080;old_locus_tag=RM610_11115 NZ_JAVRJX010000006.1 Protein Homology CDS 51265 52629 . + 0 ID=cds-WP_311542333.1;Parent=gene-RM610_RS11080;Dbxref=GenBank:WP_311542333.1;Name=WP_311542333.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481758.1;locus_tag=RM610_RS11080;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_311542333.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 53074 54561 . + . ID=gene-RM610_RS11085;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=RM610_RS11085;old_locus_tag=RM610_11120 NZ_JAVRJX010000006.1 Protein Homology CDS 53074 54561 . + 0 ID=cds-WP_107376039.1;Parent=gene-RM610_RS11085;Dbxref=GenBank:WP_107376039.1;Name=WP_107376039.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=RM610_RS11085;product=degradosome RNA helicase CshA;protein_id=WP_107376039.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 54822 55295 . + . ID=gene-RM610_RS11090;Name=RM610_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11090;old_locus_tag=RM610_11125 NZ_JAVRJX010000006.1 Protein Homology CDS 54822 55295 . + 0 ID=cds-WP_107359326.1;Parent=gene-RM610_RS11090;Dbxref=GenBank:WP_107359326.1;Name=WP_107359326.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM610_RS11090;product=PH domain-containing protein;protein_id=WP_107359326.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 55288 56766 . + . ID=gene-RM610_RS11095;Name=RM610_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11095;old_locus_tag=RM610_11130 NZ_JAVRJX010000006.1 Protein Homology CDS 55288 56766 . + 0 ID=cds-WP_311542334.1;Parent=gene-RM610_RS11095;Dbxref=GenBank:WP_311542334.1;Name=WP_311542334.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169261.1;locus_tag=RM610_RS11095;product=PH domain-containing protein;protein_id=WP_311542334.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 56763 57278 . + . ID=gene-RM610_RS11100;Name=RM610_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11100;old_locus_tag=RM610_11135 NZ_JAVRJX010000006.1 Protein Homology CDS 56763 57278 . + 0 ID=cds-WP_157948377.1;Parent=gene-RM610_RS11100;Dbxref=GenBank:WP_157948377.1;Name=WP_157948377.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM610_RS11100;product=PH domain-containing protein;protein_id=WP_157948377.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 57275 57625 . + . ID=gene-RM610_RS11105;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=RM610_RS11105;old_locus_tag=RM610_11140 NZ_JAVRJX010000006.1 Protein Homology CDS 57275 57625 . + 0 ID=cds-WP_037577181.1;Parent=gene-RM610_RS11105;Dbxref=GenBank:WP_037577181.1;Name=WP_037577181.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509014.1;locus_tag=RM610_RS11105;product=holo-ACP synthase;protein_id=WP_037577181.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 57741 58889 . + . ID=gene-RM610_RS11110;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM610_RS11110;old_locus_tag=RM610_11145 NZ_JAVRJX010000006.1 Protein Homology CDS 57741 58889 . + 0 ID=cds-WP_107359323.1;Parent=gene-RM610_RS11110;Dbxref=GenBank:WP_107359323.1;Name=WP_107359323.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281145.1;locus_tag=RM610_RS11110;product=alanine racemase;protein_id=WP_107359323.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 58974 59144 . + . ID=gene-RM610_RS11115;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=RM610_RS11115;old_locus_tag=RM610_11150 NZ_JAVRJX010000006.1 Protein Homology CDS 58974 59144 . + 0 ID=cds-WP_037577177.1;Parent=gene-RM610_RS11115;Dbxref=GenBank:WP_037577177.1;Name=WP_037577177.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=RM610_RS11115;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_037577177.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 59145 59498 . + . ID=gene-RM610_RS11120;Name=RM610_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11120;old_locus_tag=RM610_11155 NZ_JAVRJX010000006.1 Protein Homology CDS 59145 59498 . + 0 ID=cds-WP_103159488.1;Parent=gene-RM610_RS11120;Dbxref=GenBank:WP_103159488.1;Name=WP_103159488.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=RM610_RS11120;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_103159488.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 59562 60566 . + . ID=gene-RM610_RS11125;Name=RM610_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11125;old_locus_tag=RM610_11160 NZ_JAVRJX010000006.1 Protein Homology CDS 59562 60566 . + 0 ID=cds-WP_037577174.1;Parent=gene-RM610_RS11125;Dbxref=GenBank:WP_037577174.1;Name=WP_037577174.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825730.1;locus_tag=RM610_RS11125;product=SpoIIE family protein phosphatase;protein_id=WP_037577174.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 60647 60973 . + . ID=gene-RM610_RS11130;Name=RM610_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11130;old_locus_tag=RM610_11165 NZ_JAVRJX010000006.1 Protein Homology CDS 60647 60973 . + 0 ID=cds-WP_037577172.1;Parent=gene-RM610_RS11130;Dbxref=GenBank:WP_037577172.1;Name=WP_037577172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=RM610_RS11130;product=anti-sigma factor antagonist;protein_id=WP_037577172.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 60976 61455 . + . ID=gene-RM610_RS11135;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=RM610_RS11135;old_locus_tag=RM610_11170 NZ_JAVRJX010000006.1 Protein Homology CDS 60976 61455 . + 0 ID=cds-WP_037577169.1;Parent=gene-RM610_RS11135;Dbxref=GenBank:WP_037577169.1;Name=WP_037577169.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426491.1;locus_tag=RM610_RS11135;product=anti-sigma B factor RsbW;protein_id=WP_037577169.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 61430 62200 . + . ID=gene-RM610_RS11140;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=RM610_RS11140;old_locus_tag=RM610_11175 NZ_JAVRJX010000006.1 Protein Homology CDS 61430 62200 . + 0 ID=cds-WP_037577167.1;Parent=gene-RM610_RS11140;Dbxref=GenBank:WP_037577167.1;Name=WP_037577167.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505950.1;locus_tag=RM610_RS11140;product=RNA polymerase sigma factor SigB;protein_id=WP_037577167.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 62355 64505 . + . ID=gene-RM610_RS11145;Name=RM610_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11145;old_locus_tag=RM610_11180 NZ_JAVRJX010000006.1 Protein Homology CDS 62355 64505 . + 0 ID=cds-WP_311542335.1;Parent=gene-RM610_RS11145;Dbxref=GenBank:WP_311542335.1;Name=WP_311542335.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507115.1;locus_tag=RM610_RS11145;product=Tex family protein;protein_id=WP_311542335.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 64498 64953 . + . ID=gene-RM610_RS11150;Name=RM610_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11150;old_locus_tag=RM610_11185 NZ_JAVRJX010000006.1 Protein Homology CDS 64498 64953 . + 0 ID=cds-WP_107381562.1;Parent=gene-RM610_RS11150;Dbxref=GenBank:WP_107381562.1;Name=WP_107381562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058114.1;locus_tag=RM610_RS11150;product=SprT family protein;protein_id=WP_107381562.1;transl_table=11 NZ_JAVRJX010000006.1 RefSeq gene 65403 65485 . + . ID=gene-RM610_RS11155;Name=RM610_RS11155;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11155;old_locus_tag=RM610_11190 NZ_JAVRJX010000006.1 tRNAscan-SE tRNA 65403 65485 . + . ID=rna-RM610_RS11155;Parent=gene-RM610_RS11155;anticodon=(pos:65436..65438);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11155;product=tRNA-Leu NZ_JAVRJX010000006.1 tRNAscan-SE exon 65403 65485 . + . ID=exon-RM610_RS11155-1;Parent=rna-RM610_RS11155;anticodon=(pos:65436..65438);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11155;product=tRNA-Leu NZ_JAVRJX010000006.1 RefSeq gene 65508 65581 . + . ID=gene-RM610_RS11160;Name=RM610_RS11160;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11160;old_locus_tag=RM610_11195 NZ_JAVRJX010000006.1 tRNAscan-SE tRNA 65508 65581 . + . ID=rna-RM610_RS11160;Parent=gene-RM610_RS11160;anticodon=(pos:65540..65542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11160;product=tRNA-Gly NZ_JAVRJX010000006.1 tRNAscan-SE exon 65508 65581 . + . ID=exon-RM610_RS11160-1;Parent=rna-RM610_RS11160;anticodon=(pos:65540..65542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11160;product=tRNA-Gly ##sequence-region NZ_JAVRJX010000007.1 1 43235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000007.1 RefSeq region 1 43235 . + . ID=NZ_JAVRJX010000007.1:1..43235;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000007.1 RefSeq gene 1 233 . + . ID=gene-RM610_RS11165;Name=RM610_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11165;old_locus_tag=RM610_11200;partial=true;start_range=.,1 NZ_JAVRJX010000007.1 Protein Homology CDS 1 233 . + 2 ID=cds-WP_311542336.1;Parent=gene-RM610_RS11165;Dbxref=GenBank:WP_311542336.1;Name=WP_311542336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.7;locus_tag=RM610_RS11165;partial=true;product=IS3 family transposase;protein_id=WP_311542336.1;start_range=.,1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 230 1273 . + . ID=gene-RM610_RS11170;Name=RM610_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11170;old_locus_tag=RM610_11205 NZ_JAVRJX010000007.1 GeneMarkS-2+ CDS 230 1273 . + 0 ID=cds-WP_311542337.1;Parent=gene-RM610_RS11170;Dbxref=GenBank:WP_311542337.1;Name=WP_311542337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11170;product=type VII secretion EssC family protein;protein_id=WP_311542337.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 1279 1551 . + . ID=gene-RM610_RS11175;Name=RM610_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11175;old_locus_tag=RM610_11210 NZ_JAVRJX010000007.1 Protein Homology CDS 1279 1551 . + 0 ID=cds-WP_194746555.1;Parent=gene-RM610_RS11175;Dbxref=GenBank:WP_194746555.1;Name=WP_194746555.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036301.7;locus_tag=RM610_RS11175;product=DUF5344 family protein;protein_id=WP_194746555.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 1565 1948 . + . ID=gene-RM610_RS11180;Name=RM610_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11180;old_locus_tag=RM610_11215 NZ_JAVRJX010000007.1 Protein Homology CDS 1565 1948 . + 0 ID=cds-WP_311542338.1;Parent=gene-RM610_RS11180;Dbxref=GenBank:WP_311542338.1;Name=WP_311542338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028198.7;locus_tag=RM610_RS11180;product=YwqH-like family protein;protein_id=WP_311542338.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 1963 3636 . + . ID=gene-RM610_RS11185;Name=RM610_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11185;old_locus_tag=RM610_11220 NZ_JAVRJX010000007.1 Protein Homology CDS 1963 3636 . + 0 ID=cds-WP_311542339.1;Parent=gene-RM610_RS11185;Dbxref=GenBank:WP_311542339.1;Name=WP_311542339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458319.1;locus_tag=RM610_RS11185;product=T7SS effector LXG polymorphic toxin;protein_id=WP_311542339.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 3648 4313 . + . ID=gene-RM610_RS11190;Name=RM610_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11190;old_locus_tag=RM610_11225 NZ_JAVRJX010000007.1 Protein Homology CDS 3648 4313 . + 0 ID=cds-WP_311542340.1;Parent=gene-RM610_RS11190;Dbxref=GenBank:WP_311542340.1;Name=WP_311542340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM610_RS11190;product=DUF5079 family protein;protein_id=WP_311542340.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 4303 4947 . + . ID=gene-RM610_RS11195;Name=RM610_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11195;old_locus_tag=RM610_11230 NZ_JAVRJX010000007.1 Protein Homology CDS 4303 4947 . + 0 ID=cds-WP_311542341.1;Parent=gene-RM610_RS11195;Dbxref=GenBank:WP_311542341.1;Name=WP_311542341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM610_RS11195;product=DUF5079 family protein;protein_id=WP_311542341.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 4947 5402 . + . ID=gene-RM610_RS11200;Name=RM610_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11200;old_locus_tag=RM610_11235 NZ_JAVRJX010000007.1 Protein Homology CDS 4947 5402 . + 0 ID=cds-WP_107633640.1;Parent=gene-RM610_RS11200;Dbxref=GenBank:WP_107633640.1;Name=WP_107633640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441710.1;locus_tag=RM610_RS11200;product=DUF5085 family protein;protein_id=WP_107633640.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 5395 5856 . + . ID=gene-RM610_RS11205;Name=RM610_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11205;old_locus_tag=RM610_11240 NZ_JAVRJX010000007.1 Protein Homology CDS 5395 5856 . + 0 ID=cds-WP_107633641.1;Parent=gene-RM610_RS11205;Dbxref=GenBank:WP_107633641.1;Name=WP_107633641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000360006.1;locus_tag=RM610_RS11205;product=DUF5085 family protein;protein_id=WP_107633641.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 5930 6142 . + . ID=gene-RM610_RS11210;Name=RM610_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11210;old_locus_tag=RM610_11245 NZ_JAVRJX010000007.1 Protein Homology CDS 5930 6142 . + 0 ID=cds-WP_311542342.1;Parent=gene-RM610_RS11210;Dbxref=GenBank:WP_311542342.1;Name=WP_311542342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458315.1;locus_tag=RM610_RS11210;product=hypothetical protein;protein_id=WP_311542342.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 6223 6822 . + . ID=gene-RM610_RS11215;Name=RM610_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11215;old_locus_tag=RM610_11250 NZ_JAVRJX010000007.1 Protein Homology CDS 6223 6822 . + 0 ID=cds-WP_305850319.1;Parent=gene-RM610_RS11215;Dbxref=GenBank:WP_305850319.1;Name=WP_305850319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498849.1;locus_tag=RM610_RS11215;product=DUF5080 family protein;protein_id=WP_305850319.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 6999 7544 . + . ID=gene-RM610_RS11220;Name=RM610_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11220;old_locus_tag=RM610_11255 NZ_JAVRJX010000007.1 Protein Homology CDS 6999 7544 . + 0 ID=cds-WP_267894649.1;Parent=gene-RM610_RS11220;Dbxref=GenBank:WP_267894649.1;Name=WP_267894649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM610_RS11220;product=DUF5079 family protein;protein_id=WP_267894649.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 7598 8224 . + . ID=gene-RM610_RS11225;Name=RM610_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11225;old_locus_tag=RM610_11260 NZ_JAVRJX010000007.1 Protein Homology CDS 7598 8224 . + 0 ID=cds-WP_338141832.1;Parent=gene-RM610_RS11225;Dbxref=GenBank:WP_338141832.1;Name=WP_338141832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM610_RS11225;product=DUF5079 family protein;protein_id=WP_338141832.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq pseudogene 8384 9235 . - . ID=gene-RM610_RS11230;Name=RM610_RS11230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11230;old_locus_tag=RM610_11265;pseudo=true NZ_JAVRJX010000007.1 Protein Homology CDS 8384 9235 . - 0 ID=cds-RM610_RS11230;Parent=gene-RM610_RS11230;Note=internal stop;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460327.1;locus_tag=RM610_RS11230;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 9449 12073 . + . ID=gene-RM610_RS11235;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=RM610_RS11235;old_locus_tag=RM610_11270 NZ_JAVRJX010000007.1 Protein Homology CDS 9449 12073 . + 0 ID=cds-WP_311542343.1;Parent=gene-RM610_RS11235;Dbxref=GenBank:WP_311542343.1;Name=WP_311542343.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425622.1;locus_tag=RM610_RS11235;product=pyruvate%2C phosphate dikinase;protein_id=WP_311542343.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 12075 12902 . + . ID=gene-RM610_RS11240;Name=RM610_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11240;old_locus_tag=RM610_11275 NZ_JAVRJX010000007.1 Protein Homology CDS 12075 12902 . + 0 ID=cds-WP_311542344.1;Parent=gene-RM610_RS11240;Dbxref=GenBank:WP_311542344.1;Name=WP_311542344.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728561.1;locus_tag=RM610_RS11240;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_311542344.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 13093 14421 . + . ID=gene-RM610_RS11245;Name=RM610_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11245;old_locus_tag=RM610_11280 NZ_JAVRJX010000007.1 Protein Homology CDS 13093 14421 . + 0 ID=cds-WP_107369970.1;Parent=gene-RM610_RS11245;Dbxref=GenBank:WP_107369970.1;Name=WP_107369970.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898389.1;locus_tag=RM610_RS11245;product=sodium-dependent transporter;protein_id=WP_107369970.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 14514 15851 . - . ID=gene-RM610_RS11250;Name=RM610_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11250;old_locus_tag=RM610_11285 NZ_JAVRJX010000007.1 Protein Homology CDS 14514 15851 . - 0 ID=cds-WP_105996898.1;Parent=gene-RM610_RS11250;Dbxref=GenBank:WP_105996898.1;Name=WP_105996898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425618.1;locus_tag=RM610_RS11250;product=carboxylesterase family protein;protein_id=WP_105996898.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 15863 16285 . - . ID=gene-RM610_RS11255;Name=RM610_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11255;old_locus_tag=RM610_11290 NZ_JAVRJX010000007.1 Protein Homology CDS 15863 16285 . - 0 ID=cds-WP_107358807.1;Parent=gene-RM610_RS11255;Dbxref=GenBank:WP_107358807.1;Name=WP_107358807.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013084158.1;locus_tag=RM610_RS11255;product=GNAT family N-acetyltransferase;protein_id=WP_107358807.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 16439 17350 . + . ID=gene-RM610_RS11260;Name=RM610_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11260;old_locus_tag=RM610_11295 NZ_JAVRJX010000007.1 Protein Homology CDS 16439 17350 . + 0 ID=cds-WP_107375785.1;Parent=gene-RM610_RS11260;Dbxref=GenBank:WP_107375785.1;Name=WP_107375785.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614845.1;locus_tag=RM610_RS11260;product=PLP-dependent cysteine synthase family protein;protein_id=WP_107375785.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 17343 18482 . + . ID=gene-RM610_RS11265;Name=RM610_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11265;old_locus_tag=RM610_11300 NZ_JAVRJX010000007.1 Protein Homology CDS 17343 18482 . + 0 ID=cds-WP_105963494.1;Parent=gene-RM610_RS11265;Dbxref=GenBank:WP_105963494.1;Name=WP_105963494.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482209.1;locus_tag=RM610_RS11265;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_105963494.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 18779 19789 . + . ID=gene-RM610_RS11270;Name=RM610_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11270;old_locus_tag=RM610_11305 NZ_JAVRJX010000007.1 Protein Homology CDS 18779 19789 . + 0 ID=cds-WP_311542346.1;Parent=gene-RM610_RS11270;Dbxref=GenBank:WP_311542346.1;Name=WP_311542346.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170274.1;locus_tag=RM610_RS11270;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311542346.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 19851 21098 . - . ID=gene-RM610_RS11275;Name=RM610_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11275;old_locus_tag=RM610_11310 NZ_JAVRJX010000007.1 Protein Homology CDS 19851 21098 . - 0 ID=cds-WP_157946311.1;Parent=gene-RM610_RS11275;Dbxref=GenBank:WP_157946311.1;Name=WP_157946311.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM610_RS11275;product=ABC transporter permease;protein_id=WP_157946311.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 21242 21853 . + . ID=gene-RM610_RS11280;Name=RM610_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11280;old_locus_tag=RM610_11315 NZ_JAVRJX010000007.1 Protein Homology CDS 21242 21853 . + 0 ID=cds-WP_107358812.1;Parent=gene-RM610_RS11280;Dbxref=GenBank:WP_107358812.1;Name=WP_107358812.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425612.1;locus_tag=RM610_RS11280;product=TetR/AcrR family transcriptional regulator;protein_id=WP_107358812.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 22098 22370 . - . ID=gene-RM610_RS11285;Name=RM610_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11285;old_locus_tag=RM610_11320 NZ_JAVRJX010000007.1 Protein Homology CDS 22098 22370 . - 0 ID=cds-WP_037575566.1;Parent=gene-RM610_RS11285;Dbxref=GenBank:WP_037575566.1;Name=WP_037575566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425611.1;locus_tag=RM610_RS11285;product=hypothetical protein;protein_id=WP_037575566.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 22596 23105 . + . ID=gene-RM610_RS11290;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM610_RS11290;old_locus_tag=RM610_11325 NZ_JAVRJX010000007.1 Protein Homology CDS 22596 23105 . + 0 ID=cds-WP_037575569.1;Parent=gene-RM610_RS11290;Dbxref=GenBank:WP_037575569.1;Name=WP_037575569.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=RM610_RS11290;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_037575569.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 23170 25431 . - . ID=gene-RM610_RS11295;Name=RM610_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11295;old_locus_tag=RM610_11330 NZ_JAVRJX010000007.1 Protein Homology CDS 23170 25431 . - 0 ID=cds-WP_311542347.1;Parent=gene-RM610_RS11295;Dbxref=GenBank:WP_311542347.1;Name=WP_311542347.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466595.1;locus_tag=RM610_RS11295;product=ATP-binding cassette domain-containing protein;protein_id=WP_311542347.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 25424 26254 . - . ID=gene-RM610_RS11300;Name=RM610_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11300;old_locus_tag=RM610_11335 NZ_JAVRJX010000007.1 Protein Homology CDS 25424 26254 . - 0 ID=cds-WP_105986499.1;Parent=gene-RM610_RS11300;Dbxref=GenBank:WP_105986499.1;Name=WP_105986499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=RM610_RS11300;product=YibE/F family protein;protein_id=WP_105986499.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 26251 27363 . - . ID=gene-RM610_RS11305;Name=RM610_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11305;old_locus_tag=RM610_11340 NZ_JAVRJX010000007.1 Protein Homology CDS 26251 27363 . - 0 ID=cds-WP_311542348.1;Parent=gene-RM610_RS11305;Dbxref=GenBank:WP_311542348.1;Name=WP_311542348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469651.1;locus_tag=RM610_RS11305;product=YibE/F family protein;protein_id=WP_311542348.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 27375 28250 . - . ID=gene-RM610_RS11310;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=RM610_RS11310;old_locus_tag=RM610_11345 NZ_JAVRJX010000007.1 Protein Homology CDS 27375 28250 . - 0 ID=cds-WP_311542349.1;Parent=gene-RM610_RS11310;Dbxref=GenBank:WP_311542349.1;Name=WP_311542349.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=RM610_RS11310;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_311542349.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 28373 32878 . + . ID=gene-RM610_RS11315;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=RM610_RS11315;old_locus_tag=RM610_11350 NZ_JAVRJX010000007.1 Protein Homology CDS 28373 32878 . + 0 ID=cds-WP_311542350.1;Parent=gene-RM610_RS11315;Dbxref=GenBank:WP_311542350.1;Name=WP_311542350.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=RM610_RS11315;product=glutamate synthase large subunit;protein_id=WP_311542350.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 32892 34349 . + . ID=gene-RM610_RS11320;Name=RM610_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11320;old_locus_tag=RM610_11355 NZ_JAVRJX010000007.1 Protein Homology CDS 32892 34349 . + 0 ID=cds-WP_107375794.1;Parent=gene-RM610_RS11320;Dbxref=GenBank:WP_107375794.1;Name=WP_107375794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445259.1;locus_tag=RM610_RS11320;product=glutamate synthase subunit beta;protein_id=WP_107375794.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 34416 34508 . + . ID=gene-RM610_RS11325;Name=RM610_RS11325;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11325;old_locus_tag=RM610_11360 NZ_JAVRJX010000007.1 tRNAscan-SE tRNA 34416 34508 . + . ID=rna-RM610_RS11325;Parent=gene-RM610_RS11325;anticodon=(pos:34452..34454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11325;product=tRNA-Ser NZ_JAVRJX010000007.1 tRNAscan-SE exon 34416 34508 . + . ID=exon-RM610_RS11325-1;Parent=rna-RM610_RS11325;anticodon=(pos:34452..34454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11325;product=tRNA-Ser NZ_JAVRJX010000007.1 RefSeq gene 34624 34791 . + . ID=gene-RM610_RS11330;Name=RM610_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11330;old_locus_tag=RM610_11365 NZ_JAVRJX010000007.1 GeneMarkS-2+ CDS 34624 34791 . + 0 ID=cds-WP_157947103.1;Parent=gene-RM610_RS11330;Dbxref=GenBank:WP_157947103.1;Name=WP_157947103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11330;product=hypothetical protein;protein_id=WP_157947103.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 35090 36526 . + . ID=gene-RM610_RS11335;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=RM610_RS11335;old_locus_tag=RM610_11370 NZ_JAVRJX010000007.1 Protein Homology CDS 35090 36526 . + 0 ID=cds-WP_107358819.1;Parent=gene-RM610_RS11335;Dbxref=GenBank:WP_107358819.1;Name=WP_107358819.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279382.1;locus_tag=RM610_RS11335;product=PTS system trehalose-specific EIIBC component;protein_id=WP_107358819.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 36543 38183 . + . ID=gene-RM610_RS11340;Name=RM610_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11340;old_locus_tag=RM610_11375 NZ_JAVRJX010000007.1 Protein Homology CDS 36543 38183 . + 0 ID=cds-WP_107375795.1;Parent=gene-RM610_RS11340;Dbxref=GenBank:WP_107375795.1;Name=WP_107375795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454507.1;locus_tag=RM610_RS11340;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_107375795.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 38199 38924 . + . ID=gene-RM610_RS11345;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=RM610_RS11345;old_locus_tag=RM610_11380 NZ_JAVRJX010000007.1 Protein Homology CDS 38199 38924 . + 0 ID=cds-WP_311542351.1;Parent=gene-RM610_RS11345;Dbxref=GenBank:WP_311542351.1;Name=WP_311542351.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303885.1;locus_tag=RM610_RS11345;product=trehalose operon repressor;protein_id=WP_311542351.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 39018 39287 . + . ID=gene-RM610_RS11350;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=RM610_RS11350;old_locus_tag=RM610_11385 NZ_JAVRJX010000007.1 cmsearch SRP_RNA 39018 39287 . + . ID=rna-RM610_RS11350;Parent=gene-RM610_RS11350;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS11350;product=signal recognition particle sRNA large type NZ_JAVRJX010000007.1 cmsearch exon 39018 39287 . + . ID=exon-RM610_RS11350-1;Parent=rna-RM610_RS11350;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS11350;product=signal recognition particle sRNA large type NZ_JAVRJX010000007.1 RefSeq gene 39467 40000 . + . ID=gene-RM610_RS11355;Name=RM610_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11355;old_locus_tag=RM610_11390 NZ_JAVRJX010000007.1 Protein Homology CDS 39467 40000 . + 0 ID=cds-WP_107375797.1;Parent=gene-RM610_RS11355;Dbxref=GenBank:WP_107375797.1;Name=WP_107375797.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=RM610_RS11355;product=GNAT family N-acetyltransferase;protein_id=WP_107375797.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 40066 41754 . + . ID=gene-RM610_RS11360;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=RM610_RS11360;old_locus_tag=RM610_11395 NZ_JAVRJX010000007.1 Protein Homology CDS 40066 41754 . + 0 ID=cds-WP_107381608.1;Parent=gene-RM610_RS11360;Dbxref=GenBank:WP_107381608.1;Name=WP_107381608.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=RM610_RS11360;product=DNA polymerase III subunit gamma/tau;protein_id=WP_107381608.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 41864 42184 . + . ID=gene-RM610_RS11365;Name=RM610_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11365;old_locus_tag=RM610_11400 NZ_JAVRJX010000007.1 Protein Homology CDS 41864 42184 . + 0 ID=cds-WP_037564914.1;Parent=gene-RM610_RS11365;Dbxref=GenBank:WP_037564914.1;Name=WP_037564914.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=RM610_RS11365;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_037564914.1;transl_table=11 NZ_JAVRJX010000007.1 RefSeq gene 42186 42782 . + . ID=gene-RM610_RS11370;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=RM610_RS11370;old_locus_tag=RM610_11405 NZ_JAVRJX010000007.1 Protein Homology CDS 42186 42782 . + 0 ID=cds-WP_037577434.1;Parent=gene-RM610_RS11370;Dbxref=GenBank:WP_037577434.1;Name=WP_037577434.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=RM610_RS11370;product=recombination mediator RecR;protein_id=WP_037577434.1;transl_table=11 ##sequence-region NZ_JAVRJX010000008.1 1 40443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000008.1 RefSeq region 1 40443 . + . ID=NZ_JAVRJX010000008.1:1..40443;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000008.1 RefSeq gene 185 1737 . - . ID=gene-RM610_RS12090;Name=RM610_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS12090 NZ_JAVRJX010000008.1 Protein Homology CDS 1063 1737 . - 0 ID=cds-WP_375712223.1;Parent=gene-RM610_RS12090;Dbxref=GenBank:WP_375712223.1;Name=WP_375712223.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611580.1;locus_tag=RM610_RS12090;product=IS3 family transposase;protein_id=WP_375712223.1;transl_table=11 NZ_JAVRJX010000008.1 Protein Homology CDS 185 1060 . - 0 ID=cds-WP_375712223.1;Parent=gene-RM610_RS12090;Dbxref=GenBank:WP_375712223.1;Name=WP_375712223.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611580.1;locus_tag=RM610_RS12090;product=IS3 family transposase;protein_id=WP_375712223.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 1925 2116 . - . ID=gene-RM610_RS11385;Name=RM610_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11385;old_locus_tag=RM610_11420 NZ_JAVRJX010000008.1 Protein Homology CDS 1925 2116 . - 0 ID=cds-WP_037577070.1;Parent=gene-RM610_RS11385;Dbxref=GenBank:WP_037577070.1;Name=WP_037577070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498936.1;locus_tag=RM610_RS11385;product=hypothetical protein;protein_id=WP_037577070.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 2259 3599 . + . ID=gene-RM610_RS11390;Name=RM610_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11390;old_locus_tag=RM610_11425 NZ_JAVRJX010000008.1 Protein Homology CDS 2259 3599 . + 0 ID=cds-WP_107380998.1;Parent=gene-RM610_RS11390;Dbxref=GenBank:WP_107380998.1;Name=WP_107380998.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001644634.1;locus_tag=RM610_RS11390;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_107380998.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 3601 4221 . + . ID=gene-RM610_RS11395;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=RM610_RS11395;old_locus_tag=RM610_11430 NZ_JAVRJX010000008.1 Protein Homology CDS 3601 4221 . + 0 ID=cds-WP_037577060.1;Parent=gene-RM610_RS11395;Dbxref=GenBank:WP_037577060.1;Name=WP_037577060.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481884.1;locus_tag=RM610_RS11395;product=dTMP kinase;protein_id=WP_037577060.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 4362 4691 . + . ID=gene-RM610_RS11400;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=RM610_RS11400;old_locus_tag=RM610_11435 NZ_JAVRJX010000008.1 Protein Homology CDS 4362 4691 . + 0 ID=cds-WP_037577055.1;Parent=gene-RM610_RS11400;Dbxref=GenBank:WP_037577055.1;Name=WP_037577055.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=RM610_RS11400;product=cyclic di-AMP receptor DarA;protein_id=WP_037577055.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 4863 5792 . + . ID=gene-RM610_RS11405;Name=RM610_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11405;old_locus_tag=RM610_11440 NZ_JAVRJX010000008.1 Protein Homology CDS 4863 5792 . + 0 ID=cds-WP_311542354.1;Parent=gene-RM610_RS11405;Dbxref=GenBank:WP_311542354.1;Name=WP_311542354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=RM610_RS11405;product=DNA polymerase III delta subunit-related protein;protein_id=WP_311542354.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 5798 6601 . + . ID=gene-RM610_RS11410;Name=RM610_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11410;old_locus_tag=RM610_11445 NZ_JAVRJX010000008.1 Protein Homology CDS 5798 6601 . + 0 ID=cds-WP_105986954.1;Parent=gene-RM610_RS11410;Dbxref=GenBank:WP_105986954.1;Name=WP_105986954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=RM610_RS11410;product=PSP1 domain-containing protein;protein_id=WP_105986954.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 6615 6968 . + . ID=gene-RM610_RS11415;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=RM610_RS11415;old_locus_tag=RM610_11450 NZ_JAVRJX010000008.1 Protein Homology CDS 6615 6968 . + 0 ID=cds-WP_037577040.1;Parent=gene-RM610_RS11415;Dbxref=GenBank:WP_037577040.1;Name=WP_037577040.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426526.1;locus_tag=RM610_RS11415;product=DNA replication initiation control protein YabA;protein_id=WP_037577040.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 7008 7733 . + . ID=gene-RM610_RS11420;Name=RM610_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11420;old_locus_tag=RM610_11455 NZ_JAVRJX010000008.1 Protein Homology CDS 7008 7733 . + 0 ID=cds-WP_107359612.1;Parent=gene-RM610_RS11420;Dbxref=GenBank:WP_107359612.1;Name=WP_107359612.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=RM610_RS11420;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_107359612.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 7726 7980 . + . ID=gene-RM610_RS11425;Name=RM610_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11425;old_locus_tag=RM610_11460 NZ_JAVRJX010000008.1 Protein Homology CDS 7726 7980 . + 0 ID=cds-WP_105986956.1;Parent=gene-RM610_RS11425;Dbxref=GenBank:WP_105986956.1;Name=WP_105986956.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384549.1;locus_tag=RM610_RS11425;product=GIY-YIG nuclease family protein;protein_id=WP_105986956.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 7977 8813 . + . ID=gene-RM610_RS11430;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=RM610_RS11430;old_locus_tag=RM610_11465 NZ_JAVRJX010000008.1 Protein Homology CDS 7977 8813 . + 0 ID=cds-WP_311542355.1;Parent=gene-RM610_RS11430;Dbxref=GenBank:WP_311542355.1;Name=WP_311542355.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509790.1;locus_tag=RM610_RS11430;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_311542355.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 8910 10877 . + . ID=gene-RM610_RS11435;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=RM610_RS11435;old_locus_tag=RM610_11470 NZ_JAVRJX010000008.1 Protein Homology CDS 8910 10877 . + 0 ID=cds-WP_107375921.1;Parent=gene-RM610_RS11435;Dbxref=GenBank:WP_107375921.1;Name=WP_107375921.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=RM610_RS11435;product=methionine--tRNA ligase;protein_id=WP_107375921.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 11000 11770 . + . ID=gene-RM610_RS11440;Name=RM610_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11440;old_locus_tag=RM610_11475 NZ_JAVRJX010000008.1 Protein Homology CDS 11000 11770 . + 0 ID=cds-WP_107359615.1;Parent=gene-RM610_RS11440;Dbxref=GenBank:WP_107359615.1;Name=WP_107359615.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176425.1;locus_tag=RM610_RS11440;product=TatD family hydrolase;protein_id=WP_107359615.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 11803 12342 . + . ID=gene-RM610_RS11445;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=RM610_RS11445;old_locus_tag=RM610_11480 NZ_JAVRJX010000008.1 Protein Homology CDS 11803 12342 . + 0 ID=cds-WP_037577013.1;Parent=gene-RM610_RS11445;Dbxref=GenBank:WP_037577013.1;Name=WP_037577013.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=RM610_RS11445;product=ribonuclease M5;protein_id=WP_037577013.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 12350 13240 . + . ID=gene-RM610_RS11450;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=RM610_RS11450;old_locus_tag=RM610_11485 NZ_JAVRJX010000008.1 Protein Homology CDS 12350 13240 . + 0 ID=cds-WP_311542356.1;Parent=gene-RM610_RS11450;Dbxref=GenBank:WP_311542356.1;Name=WP_311542356.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=RM610_RS11450;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_311542356.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 13340 13606 . + . ID=gene-RM610_RS11455;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=RM610_RS11455;old_locus_tag=RM610_11490 NZ_JAVRJX010000008.1 Protein Homology CDS 13340 13606 . + 0 ID=cds-WP_039647119.1;Parent=gene-RM610_RS11455;Dbxref=GenBank:WP_039647119.1;Name=WP_039647119.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911349.1;locus_tag=RM610_RS11455;product=biofilm formation stimulator Veg;protein_id=WP_039647119.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 13848 14696 . + . ID=gene-RM610_RS11460;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=RM610_RS11460;old_locus_tag=RM610_11495 NZ_JAVRJX010000008.1 Protein Homology CDS 13848 14696 . + 0 ID=cds-WP_311542357.1;Parent=gene-RM610_RS11460;Dbxref=GenBank:WP_311542357.1;Name=WP_311542357.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=RM610_RS11460;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_311542357.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 14719 15546 . + . ID=gene-RM610_RS11465;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=RM610_RS11465;old_locus_tag=RM610_11500 NZ_JAVRJX010000008.1 Protein Homology CDS 14719 15546 . + 0 ID=cds-WP_037577001.1;Parent=gene-RM610_RS11465;Dbxref=GenBank:WP_037577001.1;Name=WP_037577001.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384564.1;locus_tag=RM610_RS11465;product=pur operon repressor;protein_id=WP_037577001.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 15564 15944 . + . ID=gene-RM610_RS11470;Name=RM610_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11470;old_locus_tag=RM610_11505 NZ_JAVRJX010000008.1 Protein Homology CDS 15564 15944 . + 0 ID=cds-WP_107381005.1;Parent=gene-RM610_RS11470;Dbxref=GenBank:WP_107381005.1;Name=WP_107381005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169426.1;locus_tag=RM610_RS11470;product=RidA family protein;protein_id=WP_107381005.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 16008 16322 . + . ID=gene-RM610_RS11475;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=RM610_RS11475;old_locus_tag=RM610_11510 NZ_JAVRJX010000008.1 Protein Homology CDS 16008 16322 . + 0 ID=cds-WP_037576996.1;Parent=gene-RM610_RS11475;Dbxref=GenBank:WP_037576996.1;Name=WP_037576996.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499048.1;locus_tag=RM610_RS11475;product=septation regulator SpoVG;protein_id=WP_037576996.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 16584 17951 . + . ID=gene-RM610_RS11480;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=RM610_RS11480;old_locus_tag=RM610_11515 NZ_JAVRJX010000008.1 Protein Homology CDS 16584 17951 . + 0 ID=cds-WP_311542358.1;Parent=gene-RM610_RS11480;Dbxref=GenBank:WP_311542358.1;Name=WP_311542358.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=RM610_RS11480;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_311542358.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 18027 18992 . + . ID=gene-RM610_RS11485;Name=RM610_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11485;old_locus_tag=RM610_11520 NZ_JAVRJX010000008.1 Protein Homology CDS 18027 18992 . + 0 ID=cds-WP_105986965.1;Parent=gene-RM610_RS11485;Dbxref=GenBank:WP_105986965.1;Name=WP_105986965.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=RM610_RS11485;product=ribose-phosphate diphosphokinase;protein_id=WP_105986965.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 19131 19808 . + . ID=gene-RM610_RS11490;Name=RM610_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11490;old_locus_tag=RM610_11525 NZ_JAVRJX010000008.1 Protein Homology CDS 19131 19808 . + 0 ID=cds-WP_107381007.1;Parent=gene-RM610_RS11490;Dbxref=GenBank:WP_107381007.1;Name=WP_107381007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276760.1;locus_tag=RM610_RS11490;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_107381007.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 19953 20519 . + . ID=gene-RM610_RS11495;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=RM610_RS11495;old_locus_tag=RM610_11530 NZ_JAVRJX010000008.1 Protein Homology CDS 19953 20519 . + 0 ID=cds-WP_311542359.1;Parent=gene-RM610_RS11495;Dbxref=GenBank:WP_311542359.1;Name=WP_311542359.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451736.1;locus_tag=RM610_RS11495;product=aminoacyl-tRNA hydrolase;protein_id=WP_311542359.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 20531 24031 . + . ID=gene-RM610_RS11500;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=RM610_RS11500;old_locus_tag=RM610_11535 NZ_JAVRJX010000008.1 Protein Homology CDS 20531 24031 . + 0 ID=cds-WP_375712224.1;Parent=gene-RM610_RS11500;Dbxref=GenBank:WP_375712224.1;Name=WP_375712224.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384578.1;locus_tag=RM610_RS11500;product=transcription-repair coupling factor;protein_id=WP_375712224.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 24021 25550 . + . ID=gene-RM610_RS11505;Name=RM610_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11505;old_locus_tag=RM610_11540 NZ_JAVRJX010000008.1 Protein Homology CDS 24021 25550 . + 0 ID=cds-WP_107381010.1;Parent=gene-RM610_RS11505;Dbxref=GenBank:WP_107381010.1;Name=WP_107381010.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=RM610_RS11505;product=polysaccharide biosynthesis protein;protein_id=WP_107381010.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 25547 26734 . + . ID=gene-RM610_RS11510;Name=RM610_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11510;old_locus_tag=RM610_11545 NZ_JAVRJX010000008.1 Protein Homology CDS 25547 26734 . + 0 ID=cds-WP_311542360.1;Parent=gene-RM610_RS11510;Dbxref=GenBank:WP_311542360.1;Name=WP_311542360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165012.1;locus_tag=RM610_RS11510;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_311542360.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 26721 26978 . + . ID=gene-RM610_RS11515;Name=RM610_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11515;old_locus_tag=RM610_11550 NZ_JAVRJX010000008.1 Protein Homology CDS 26721 26978 . + 0 ID=cds-WP_037576972.1;Parent=gene-RM610_RS11515;Dbxref=GenBank:WP_037576972.1;Name=WP_037576972.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436795.1;locus_tag=RM610_RS11515;product=RNA-binding S4 domain-containing protein;protein_id=WP_037576972.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 27003 27392 . + . ID=gene-RM610_RS11520;Name=RM610_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11520;old_locus_tag=RM610_11555 NZ_JAVRJX010000008.1 Protein Homology CDS 27003 27392 . + 0 ID=cds-WP_037576970.1;Parent=gene-RM610_RS11520;Dbxref=GenBank:WP_037576970.1;Name=WP_037576970.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303866.1;locus_tag=RM610_RS11520;product=FtsB family cell division protein;protein_id=WP_037576970.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 27612 27989 . + . ID=gene-RM610_RS11525;Name=RM610_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11525;old_locus_tag=RM610_11560 NZ_JAVRJX010000008.1 Protein Homology CDS 27612 27989 . + 0 ID=cds-WP_037576967.1;Parent=gene-RM610_RS11525;Dbxref=GenBank:WP_037576967.1;Name=WP_037576967.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=RM610_RS11525;product=S1 domain-containing RNA-binding protein;protein_id=WP_037576967.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 28061 29344 . + . ID=gene-RM610_RS11530;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=RM610_RS11530;old_locus_tag=RM610_11565 NZ_JAVRJX010000008.1 Protein Homology CDS 28061 29344 . + 0 ID=cds-WP_311542361.1;Parent=gene-RM610_RS11530;Dbxref=GenBank:WP_311542361.1;Name=WP_311542361.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426503.1;locus_tag=RM610_RS11530;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_311542361.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 29334 29873 . + . ID=gene-RM610_RS11535;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=RM610_RS11535;old_locus_tag=RM610_11570 NZ_JAVRJX010000008.1 Protein Homology CDS 29334 29873 . + 0 ID=cds-WP_107359626.1;Parent=gene-RM610_RS11535;Dbxref=GenBank:WP_107359626.1;Name=WP_107359626.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=RM610_RS11535;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_107359626.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 30019 32163 . + . ID=gene-RM610_RS11540;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=RM610_RS11540;old_locus_tag=RM610_11575 NZ_JAVRJX010000008.1 Protein Homology CDS 30019 32163 . + 0 ID=cds-WP_107370017.1;Parent=gene-RM610_RS11540;Dbxref=GenBank:WP_107370017.1;Name=WP_107370017.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169413.1;locus_tag=RM610_RS11540;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_107370017.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 32680 33573 . + . ID=gene-RM610_RS11545;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=RM610_RS11545;old_locus_tag=RM610_11580 NZ_JAVRJX010000008.1 Protein Homology CDS 32680 33573 . + 0 ID=cds-WP_311542362.1;Parent=gene-RM610_RS11545;Dbxref=GenBank:WP_311542362.1;Name=WP_311542362.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484191.1;locus_tag=RM610_RS11545;product=Hsp33 family molecular chaperone HslO;protein_id=WP_311542362.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 33743 34672 . + . ID=gene-RM610_RS11550;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=RM610_RS11550;old_locus_tag=RM610_11585 NZ_JAVRJX010000008.1 Protein Homology CDS 33743 34672 . + 0 ID=cds-WP_107375931.1;Parent=gene-RM610_RS11550;Dbxref=GenBank:WP_107375931.1;Name=WP_107375931.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=RM610_RS11550;product=cysteine synthase A;protein_id=WP_107375931.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 34939 35730 . + . ID=gene-RM610_RS11555;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=RM610_RS11555;old_locus_tag=RM610_11590 NZ_JAVRJX010000008.1 Protein Homology CDS 34939 35730 . + 0 ID=cds-WP_107375932.1;Parent=gene-RM610_RS11555;Dbxref=GenBank:WP_107375932.1;Name=WP_107375932.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=RM610_RS11555;product=dihydropteroate synthase;protein_id=WP_107375932.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 35720 36091 . + . ID=gene-RM610_RS11560;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=RM610_RS11560;old_locus_tag=RM610_11595 NZ_JAVRJX010000008.1 Protein Homology CDS 35720 36091 . + 0 ID=cds-WP_107359629.1;Parent=gene-RM610_RS11560;Dbxref=GenBank:WP_107359629.1;Name=WP_107359629.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426497.1;locus_tag=RM610_RS11560;product=dihydroneopterin aldolase;protein_id=WP_107359629.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 36084 36563 . + . ID=gene-RM610_RS11565;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=RM610_RS11565;old_locus_tag=RM610_11600 NZ_JAVRJX010000008.1 Protein Homology CDS 36084 36563 . + 0 ID=cds-WP_311542363.1;Parent=gene-RM610_RS11565;Dbxref=GenBank:WP_311542363.1;Name=WP_311542363.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276746.1;locus_tag=RM610_RS11565;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_311542363.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 36645 37640 . + . ID=gene-RM610_RS11570;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=RM610_RS11570;old_locus_tag=RM610_11605 NZ_JAVRJX010000008.1 Protein Homology CDS 36645 37640 . + 0 ID=cds-WP_107370020.1;Parent=gene-RM610_RS11570;Dbxref=GenBank:WP_107370020.1;Name=WP_107370020.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=RM610_RS11570;product=tRNA dihydrouridine synthase DusB;protein_id=WP_107370020.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 37660 39147 . + . ID=gene-RM610_RS11575;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=RM610_RS11575;old_locus_tag=RM610_11610 NZ_JAVRJX010000008.1 Protein Homology CDS 37660 39147 . + 0 ID=cds-WP_037576935.1;Parent=gene-RM610_RS11575;Dbxref=GenBank:WP_037576935.1;Name=WP_037576935.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=RM610_RS11575;product=lysine--tRNA ligase;protein_id=WP_037576935.1;transl_table=11 NZ_JAVRJX010000008.1 RefSeq gene 39537 39651 . + . ID=gene-RM610_RS11580;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM610_RS11580;old_locus_tag=RM610_11615 NZ_JAVRJX010000008.1 cmsearch rRNA 39537 39651 . + . ID=rna-RM610_RS11580;Parent=gene-RM610_RS11580;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS11580;product=5S ribosomal RNA NZ_JAVRJX010000008.1 cmsearch exon 39537 39651 . + . ID=exon-RM610_RS11580-1;Parent=rna-RM610_RS11580;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM610_RS11580;product=5S ribosomal RNA NZ_JAVRJX010000008.1 RefSeq gene 39661 39736 . + . ID=gene-RM610_RS11585;Name=RM610_RS11585;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11585;old_locus_tag=RM610_11620 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 39661 39736 . + . ID=rna-RM610_RS11585;Parent=gene-RM610_RS11585;anticodon=(pos:39694..39696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11585;product=tRNA-Val NZ_JAVRJX010000008.1 tRNAscan-SE exon 39661 39736 . + . ID=exon-RM610_RS11585-1;Parent=rna-RM610_RS11585;anticodon=(pos:39694..39696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11585;product=tRNA-Val NZ_JAVRJX010000008.1 RefSeq gene 39744 39819 . + . ID=gene-RM610_RS11590;Name=RM610_RS11590;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11590;old_locus_tag=RM610_11625 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 39744 39819 . + . ID=rna-RM610_RS11590;Parent=gene-RM610_RS11590;anticodon=(pos:39777..39779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11590;product=tRNA-Thr NZ_JAVRJX010000008.1 tRNAscan-SE exon 39744 39819 . + . ID=exon-RM610_RS11590-1;Parent=rna-RM610_RS11590;anticodon=(pos:39777..39779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11590;product=tRNA-Thr NZ_JAVRJX010000008.1 RefSeq gene 39827 39899 . + . ID=gene-RM610_RS11595;Name=RM610_RS11595;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11595;old_locus_tag=RM610_11630 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 39827 39899 . + . ID=rna-RM610_RS11595;Parent=gene-RM610_RS11595;anticodon=(pos:39860..39862);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11595;product=tRNA-Lys NZ_JAVRJX010000008.1 tRNAscan-SE exon 39827 39899 . + . ID=exon-RM610_RS11595-1;Parent=rna-RM610_RS11595;anticodon=(pos:39860..39862);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11595;product=tRNA-Lys NZ_JAVRJX010000008.1 RefSeq gene 39918 39992 . + . ID=gene-RM610_RS11600;Name=RM610_RS11600;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11600;old_locus_tag=RM610_11635 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 39918 39992 . + . ID=rna-RM610_RS11600;Parent=gene-RM610_RS11600;anticodon=(pos:39950..39952);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11600;product=tRNA-Gly NZ_JAVRJX010000008.1 tRNAscan-SE exon 39918 39992 . + . ID=exon-RM610_RS11600-1;Parent=rna-RM610_RS11600;anticodon=(pos:39950..39952);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11600;product=tRNA-Gly NZ_JAVRJX010000008.1 RefSeq gene 40001 40089 . + . ID=gene-RM610_RS11605;Name=RM610_RS11605;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11605;old_locus_tag=RM610_11640 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 40001 40089 . + . ID=rna-RM610_RS11605;Parent=gene-RM610_RS11605;anticodon=(pos:40035..40037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11605;product=tRNA-Leu NZ_JAVRJX010000008.1 tRNAscan-SE exon 40001 40089 . + . ID=exon-RM610_RS11605-1;Parent=rna-RM610_RS11605;anticodon=(pos:40035..40037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11605;product=tRNA-Leu NZ_JAVRJX010000008.1 RefSeq gene 40099 40175 . + . ID=gene-RM610_RS11610;Name=RM610_RS11610;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11610;old_locus_tag=RM610_11645 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 40099 40175 . + . ID=rna-RM610_RS11610;Parent=gene-RM610_RS11610;anticodon=(pos:40133..40135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11610;product=tRNA-Arg NZ_JAVRJX010000008.1 tRNAscan-SE exon 40099 40175 . + . ID=exon-RM610_RS11610-1;Parent=rna-RM610_RS11610;anticodon=(pos:40133..40135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11610;product=tRNA-Arg NZ_JAVRJX010000008.1 RefSeq gene 40185 40258 . + . ID=gene-RM610_RS11615;Name=RM610_RS11615;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11615;old_locus_tag=RM610_11650 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 40185 40258 . + . ID=rna-RM610_RS11615;Parent=gene-RM610_RS11615;anticodon=(pos:40219..40221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11615;product=tRNA-Pro NZ_JAVRJX010000008.1 tRNAscan-SE exon 40185 40258 . + . ID=exon-RM610_RS11615-1;Parent=rna-RM610_RS11615;anticodon=(pos:40219..40221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11615;product=tRNA-Pro NZ_JAVRJX010000008.1 RefSeq gene 40278 40353 . + . ID=gene-RM610_RS11620;Name=RM610_RS11620;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11620;old_locus_tag=RM610_11655 NZ_JAVRJX010000008.1 tRNAscan-SE tRNA 40278 40353 . + . ID=rna-RM610_RS11620;Parent=gene-RM610_RS11620;anticodon=(pos:40311..40313);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11620;product=tRNA-Ala NZ_JAVRJX010000008.1 tRNAscan-SE exon 40278 40353 . + . ID=exon-RM610_RS11620-1;Parent=rna-RM610_RS11620;anticodon=(pos:40311..40313);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11620;product=tRNA-Ala ##sequence-region NZ_JAVRJX010000009.1 1 24576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJX010000009.1 RefSeq region 1 24576 . + . ID=NZ_JAVRJX010000009.1:1..24576;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST161 NZ_JAVRJX010000009.1 RefSeq gene 121 474 . - . ID=gene-RM610_RS11625;Name=RM610_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11625;old_locus_tag=RM610_11660 NZ_JAVRJX010000009.1 Protein Homology CDS 121 474 . - 0 ID=cds-WP_107359365.1;Parent=gene-RM610_RS11625;Dbxref=GenBank:WP_107359365.1;Name=WP_107359365.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=RM610_RS11625;product=DoxX family protein;protein_id=WP_107359365.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 481 1782 . - . ID=gene-RM610_RS11630;Name=RM610_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11630;old_locus_tag=RM610_11665 NZ_JAVRJX010000009.1 Protein Homology CDS 481 1782 . - 0 ID=cds-WP_107359366.1;Parent=gene-RM610_RS11630;Dbxref=GenBank:WP_107359366.1;Name=WP_107359366.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=RM610_RS11630;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_107359366.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 1992 2702 . + . ID=gene-RM610_RS11635;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM610_RS11635;old_locus_tag=RM610_11670 NZ_JAVRJX010000009.1 Protein Homology CDS 1992 2702 . + 0 ID=cds-WP_105986994.1;Parent=gene-RM610_RS11635;Dbxref=GenBank:WP_105986994.1;Name=WP_105986994.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=RM610_RS11635;product=purine-nucleoside phosphorylase;protein_id=WP_105986994.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 2880 3293 . - . ID=gene-RM610_RS11640;Name=RM610_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11640;old_locus_tag=RM610_11675 NZ_JAVRJX010000009.1 Protein Homology CDS 2880 3293 . - 0 ID=cds-WP_107359367.1;Parent=gene-RM610_RS11640;Dbxref=GenBank:WP_107359367.1;Name=WP_107359367.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123303.1;locus_tag=RM610_RS11640;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_107359367.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 3403 4830 . - . ID=gene-RM610_RS11645;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM610_RS11645;old_locus_tag=RM610_11680 NZ_JAVRJX010000009.1 Protein Homology CDS 3403 4830 . - 0 ID=cds-WP_037576527.1;Parent=gene-RM610_RS11645;Dbxref=GenBank:WP_037576527.1;Name=WP_037576527.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506651.1;locus_tag=RM610_RS11645;product=Na+/H+ antiporter NhaC;protein_id=WP_037576527.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 5193 6557 . - . ID=gene-RM610_RS11650;Name=RM610_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11650;old_locus_tag=RM610_11685 NZ_JAVRJX010000009.1 Protein Homology CDS 5193 6557 . - 0 ID=cds-WP_107389463.1;Parent=gene-RM610_RS11650;Dbxref=GenBank:WP_107389463.1;Name=WP_107389463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=RM610_RS11650;product=EVE domain-containing protein;protein_id=WP_107389463.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 6626 6862 . - . ID=gene-RM610_RS11655;Name=RM610_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11655;old_locus_tag=RM610_11690 NZ_JAVRJX010000009.1 Protein Homology CDS 6626 6862 . - 0 ID=cds-WP_037576636.1;Parent=gene-RM610_RS11655;Dbxref=GenBank:WP_037576636.1;Name=WP_037576636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426417.1;locus_tag=RM610_RS11655;product=hypothetical protein;protein_id=WP_037576636.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 6879 7817 . - . ID=gene-RM610_RS11660;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=RM610_RS11660;old_locus_tag=RM610_11695 NZ_JAVRJX010000009.1 Protein Homology CDS 6879 7817 . - 0 ID=cds-WP_107359369.1;Parent=gene-RM610_RS11660;Dbxref=GenBank:WP_107359369.1;Name=WP_107359369.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=RM610_RS11660;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_107359369.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 7985 8686 . - . ID=gene-RM610_RS11665;Name=RM610_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11665;old_locus_tag=RM610_11700 NZ_JAVRJX010000009.1 Protein Homology CDS 7985 8686 . - 0 ID=cds-WP_107381759.1;Parent=gene-RM610_RS11665;Dbxref=GenBank:WP_107381759.1;Name=WP_107381759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729460.1;locus_tag=RM610_RS11665;product=FadR/GntR family transcriptional regulator;protein_id=WP_107381759.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 8927 9838 . + . ID=gene-RM610_RS11670;Name=RM610_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11670;old_locus_tag=RM610_11705 NZ_JAVRJX010000009.1 GeneMarkS-2+ CDS 8927 9838 . + 0 ID=cds-WP_107370160.1;Parent=gene-RM610_RS11670;Dbxref=GenBank:WP_107370160.1;Name=WP_107370160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM610_RS11670;product=lytic transglycosylase;protein_id=WP_107370160.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 9913 10767 . - . ID=gene-RM610_RS11675;Name=RM610_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11675;old_locus_tag=RM610_11710 NZ_JAVRJX010000009.1 Protein Homology CDS 9913 10767 . - 0 ID=cds-WP_311542364.1;Parent=gene-RM610_RS11675;Dbxref=GenBank:WP_311542364.1;Name=WP_311542364.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451699.1;locus_tag=RM610_RS11675;product=HAD family hydrolase;protein_id=WP_311542364.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 10836 11615 . - . ID=gene-RM610_RS11680;Name=RM610_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11680;old_locus_tag=RM610_11715 NZ_JAVRJX010000009.1 Protein Homology CDS 10836 11615 . - 0 ID=cds-WP_107359818.1;Parent=gene-RM610_RS11680;Dbxref=GenBank:WP_107359818.1;Name=WP_107359818.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=RM610_RS11680;product=ABC transporter ATP-binding protein;protein_id=WP_107359818.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 11718 13520 . - . ID=gene-RM610_RS11685;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=RM610_RS11685;old_locus_tag=RM610_11720 NZ_JAVRJX010000009.1 Protein Homology CDS 11718 13520 . - 0 ID=cds-WP_105986985.1;Parent=gene-RM610_RS11685;Dbxref=GenBank:WP_105986985.1;Name=WP_105986985.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=RM610_RS11685;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_105986985.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq pseudogene 14262 15802 . + . ID=gene-RM610_RS11690;Name=RM610_RS11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM610_RS11690;old_locus_tag=RM610_11725;pseudo=true NZ_JAVRJX010000009.1 Protein Homology CDS 14262 15802 . + 0 ID=cds-RM610_RS11690;Parent=gene-RM610_RS11690;Note=frameshifted;Ontology_term=GO:0009401,GO:0015797,GO:0022872,GO:0090565,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA,protein-phosphocysteine-mannitol phosphotransferase system transporter activity|0090565||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannitol transmembrane transport|0015797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445632.1;locus_tag=RM610_RS11690;product=PTS mannitol transporter subunit IIBC;pseudo=true;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 15849 17870 . + . ID=gene-RM610_RS11695;Name=RM610_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11695;old_locus_tag=RM610_11730 NZ_JAVRJX010000009.1 Protein Homology CDS 15849 17870 . + 0 ID=cds-WP_311542365.1;Parent=gene-RM610_RS11695;Dbxref=GenBank:WP_311542365.1;Name=WP_311542365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168357.1;locus_tag=RM610_RS11695;product=BglG family transcription antiterminator;protein_id=WP_311542365.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 17883 18317 . + . ID=gene-RM610_RS11700;Name=RM610_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11700;old_locus_tag=RM610_11735 NZ_JAVRJX010000009.1 Protein Homology CDS 17883 18317 . + 0 ID=cds-WP_311542366.1;Parent=gene-RM610_RS11700;Dbxref=GenBank:WP_311542366.1;Name=WP_311542366.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729468.1;locus_tag=RM610_RS11700;product=PTS mannitol transporter subunit IIA;protein_id=WP_311542366.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 18317 19420 . + . ID=gene-RM610_RS11705;Name=RM610_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11705;old_locus_tag=RM610_11740 NZ_JAVRJX010000009.1 Protein Homology CDS 18317 19420 . + 0 ID=cds-WP_311542367.1;Parent=gene-RM610_RS11705;Dbxref=GenBank:WP_311542367.1;Name=WP_311542367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302636.1;locus_tag=RM610_RS11705;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_311542367.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 19476 20825 . - . ID=gene-RM610_RS11710;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=RM610_RS11710;old_locus_tag=RM610_11745 NZ_JAVRJX010000009.1 Protein Homology CDS 19476 20825 . - 0 ID=cds-WP_311542368.1;Parent=gene-RM610_RS11710;Dbxref=GenBank:WP_311542368.1;Name=WP_311542368.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500881.1;locus_tag=RM610_RS11710;product=phosphoglucosamine mutase;protein_id=WP_311542368.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 20853 21785 . - . ID=gene-RM610_RS11715;Name=RM610_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM610_RS11715;old_locus_tag=RM610_11750 NZ_JAVRJX010000009.1 Protein Homology CDS 20853 21785 . - 0 ID=cds-WP_105986979.1;Parent=gene-RM610_RS11715;Dbxref=GenBank:WP_105986979.1;Name=WP_105986979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=RM610_RS11715;product=CdaR family protein;protein_id=WP_105986979.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 21786 22592 . - . ID=gene-RM610_RS11720;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=RM610_RS11720;old_locus_tag=RM610_11755 NZ_JAVRJX010000009.1 Protein Homology CDS 21786 22592 . - 0 ID=cds-WP_037576505.1;Parent=gene-RM610_RS11720;Dbxref=GenBank:WP_037576505.1;Name=WP_037576505.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453752.1;locus_tag=RM610_RS11720;product=diadenylate cyclase CdaA;protein_id=WP_037576505.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 22744 23649 . - . ID=gene-RM610_RS11725;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=RM610_RS11725;old_locus_tag=RM610_11760 NZ_JAVRJX010000009.1 Protein Homology CDS 22744 23649 . - 0 ID=cds-WP_107370166.1;Parent=gene-RM610_RS11725;Dbxref=GenBank:WP_107370166.1;Name=WP_107370166.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=RM610_RS11725;product=arginase;protein_id=WP_107370166.1;transl_table=11 NZ_JAVRJX010000009.1 RefSeq gene 24348 24420 . - . ID=gene-RM610_RS11730;Name=RM610_RS11730;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11730;old_locus_tag=RM610_11765 NZ_JAVRJX010000009.1 tRNAscan-SE tRNA 24348 24420 . - . ID=rna-RM610_RS11730;Parent=gene-RM610_RS11730;anticodon=(pos:complement(24385..24387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11730;product=tRNA-Lys NZ_JAVRJX010000009.1 tRNAscan-SE exon 24348 24420 . - . ID=exon-RM610_RS11730-1;Parent=rna-RM610_RS11730;anticodon=(pos:complement(24385..24387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11730;product=tRNA-Lys NZ_JAVRJX010000009.1 RefSeq gene 24424 24498 . - . ID=gene-RM610_RS11735;Name=RM610_RS11735;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM610_RS11735;old_locus_tag=RM610_11770 NZ_JAVRJX010000009.1 tRNAscan-SE tRNA 24424 24498 . - . ID=rna-RM610_RS11735;Parent=gene-RM610_RS11735;anticodon=(pos:complement(24464..24466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11735;product=tRNA-Gln NZ_JAVRJX010000009.1 tRNAscan-SE exon 24424 24498 . - . ID=exon-RM610_RS11735-1;Parent=rna-RM610_RS11735;anticodon=(pos:complement(24464..24466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM610_RS11735;product=tRNA-Gln ###