##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3184670v1 #!genome-build-accession NCBI_Assembly:GCF_031846705.1 #!annotation-date 09/26/2026 01:35:08 #!annotation-source NCBI RefSeq GCF_031846705.1-RS_2026_09_26 ##sequence-region NZ_JAVRJS010000010.1 1 38451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000010.1 RefSeq region 1 38451 . + . ID=NZ_JAVRJS010000010.1:1..38451;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000010.1 RefSeq gene 270 461 . - . ID=gene-RM672_RS10910;Name=RM672_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10910;old_locus_tag=RM672_10905 NZ_JAVRJS010000010.1 Protein Homology CDS 270 461 . - 0 ID=cds-WP_105963472.1;Parent=gene-RM672_RS10910;Dbxref=GenBank:WP_105963472.1;Name=WP_105963472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502694.1;locus_tag=RM672_RS10910;product=hypothetical protein;protein_id=WP_105963472.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 604 1944 . + . ID=gene-RM672_RS10915;Name=RM672_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10915;old_locus_tag=RM672_10910 NZ_JAVRJS010000010.1 Protein Homology CDS 604 1944 . + 0 ID=cds-WP_103159381.1;Parent=gene-RM672_RS10915;Dbxref=GenBank:WP_103159381.1;Name=WP_103159381.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001644634.1;locus_tag=RM672_RS10915;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_103159381.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 1946 2566 . + . ID=gene-RM672_RS10920;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=RM672_RS10920;old_locus_tag=RM672_10915 NZ_JAVRJS010000010.1 Protein Homology CDS 1946 2566 . + 0 ID=cds-WP_037577060.1;Parent=gene-RM672_RS10920;Dbxref=GenBank:WP_037577060.1;Name=WP_037577060.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481884.1;locus_tag=RM672_RS10920;product=dTMP kinase;protein_id=WP_037577060.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 2707 3036 . + . ID=gene-RM672_RS10925;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=RM672_RS10925;old_locus_tag=RM672_10920 NZ_JAVRJS010000010.1 Protein Homology CDS 2707 3036 . + 0 ID=cds-WP_037577055.1;Parent=gene-RM672_RS10925;Dbxref=GenBank:WP_037577055.1;Name=WP_037577055.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=RM672_RS10925;product=cyclic di-AMP receptor DarA;protein_id=WP_037577055.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 3208 4137 . + . ID=gene-RM672_RS10930;Name=RM672_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10930;old_locus_tag=RM672_10925 NZ_JAVRJS010000010.1 Protein Homology CDS 3208 4137 . + 0 ID=cds-WP_105963474.1;Parent=gene-RM672_RS10930;Dbxref=GenBank:WP_105963474.1;Name=WP_105963474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=RM672_RS10930;product=DNA polymerase III delta subunit-related protein;protein_id=WP_105963474.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 4143 4946 . + . ID=gene-RM672_RS10935;Name=RM672_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10935;old_locus_tag=RM672_10930 NZ_JAVRJS010000010.1 Protein Homology CDS 4143 4946 . + 0 ID=cds-WP_105997008.1;Parent=gene-RM672_RS10935;Dbxref=GenBank:WP_105997008.1;Name=WP_105997008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=RM672_RS10935;product=PSP1 domain-containing protein;protein_id=WP_105997008.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 4960 5313 . + . ID=gene-RM672_RS10940;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=RM672_RS10940;old_locus_tag=RM672_10935 NZ_JAVRJS010000010.1 Protein Homology CDS 4960 5313 . + 0 ID=cds-WP_037577040.1;Parent=gene-RM672_RS10940;Dbxref=GenBank:WP_037577040.1;Name=WP_037577040.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426526.1;locus_tag=RM672_RS10940;product=DNA replication initiation control protein YabA;protein_id=WP_037577040.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 5353 6078 . + . ID=gene-RM672_RS10945;Name=RM672_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10945;old_locus_tag=RM672_10940 NZ_JAVRJS010000010.1 Protein Homology CDS 5353 6078 . + 0 ID=cds-WP_103159377.1;Parent=gene-RM672_RS10945;Dbxref=GenBank:WP_103159377.1;Name=WP_103159377.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=RM672_RS10945;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_103159377.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 6071 6325 . + . ID=gene-RM672_RS10950;Name=RM672_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10950;old_locus_tag=RM672_10945 NZ_JAVRJS010000010.1 Protein Homology CDS 6071 6325 . + 0 ID=cds-WP_037577030.1;Parent=gene-RM672_RS10950;Dbxref=GenBank:WP_037577030.1;Name=WP_037577030.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384549.1;locus_tag=RM672_RS10950;product=GIY-YIG nuclease family protein;protein_id=WP_037577030.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 6322 7158 . + . ID=gene-RM672_RS10955;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=RM672_RS10955;old_locus_tag=RM672_10950 NZ_JAVRJS010000010.1 Protein Homology CDS 6322 7158 . + 0 ID=cds-WP_037577026.1;Parent=gene-RM672_RS10955;Dbxref=GenBank:WP_037577026.1;Name=WP_037577026.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509790.1;locus_tag=RM672_RS10955;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_037577026.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 7255 9222 . + . ID=gene-RM672_RS10960;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=RM672_RS10960;old_locus_tag=RM672_10955 NZ_JAVRJS010000010.1 Protein Homology CDS 7255 9222 . + 0 ID=cds-WP_037577021.1;Parent=gene-RM672_RS10960;Dbxref=GenBank:WP_037577021.1;Name=WP_037577021.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=RM672_RS10960;product=methionine--tRNA ligase;protein_id=WP_037577021.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 9344 10123 . + . ID=gene-RM672_RS10965;Name=RM672_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10965;old_locus_tag=RM672_10960 NZ_JAVRJS010000010.1 Protein Homology CDS 9344 10123 . + 0 ID=cds-WP_105963478.1;Parent=gene-RM672_RS10965;Dbxref=GenBank:WP_105963478.1;Name=WP_105963478.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499041.1;locus_tag=RM672_RS10965;product=TatD family hydrolase;protein_id=WP_105963478.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 10141 10680 . + . ID=gene-RM672_RS10970;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=RM672_RS10970;old_locus_tag=RM672_10965 NZ_JAVRJS010000010.1 Protein Homology CDS 10141 10680 . + 0 ID=cds-WP_037577013.1;Parent=gene-RM672_RS10970;Dbxref=GenBank:WP_037577013.1;Name=WP_037577013.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=RM672_RS10970;product=ribonuclease M5;protein_id=WP_037577013.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 10688 11578 . + . ID=gene-RM672_RS10975;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=RM672_RS10975;old_locus_tag=RM672_10970 NZ_JAVRJS010000010.1 Protein Homology CDS 10688 11578 . + 0 ID=cds-WP_311541486.1;Parent=gene-RM672_RS10975;Dbxref=GenBank:WP_311541486.1;Name=WP_311541486.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=RM672_RS10975;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_311541486.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 11678 11944 . + . ID=gene-RM672_RS10980;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=RM672_RS10980;old_locus_tag=RM672_10975 NZ_JAVRJS010000010.1 Protein Homology CDS 11678 11944 . + 0 ID=cds-WP_037577007.1;Parent=gene-RM672_RS10980;Dbxref=GenBank:WP_037577007.1;Name=WP_037577007.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426518.1;locus_tag=RM672_RS10980;product=biofilm formation stimulator Veg;protein_id=WP_037577007.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 12186 13034 . + . ID=gene-RM672_RS10985;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=RM672_RS10985;old_locus_tag=RM672_10980 NZ_JAVRJS010000010.1 Protein Homology CDS 12186 13034 . + 0 ID=cds-WP_037577004.1;Parent=gene-RM672_RS10985;Dbxref=GenBank:WP_037577004.1;Name=WP_037577004.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=RM672_RS10985;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_037577004.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 13057 13884 . + . ID=gene-RM672_RS10990;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=RM672_RS10990;old_locus_tag=RM672_10985 NZ_JAVRJS010000010.1 Protein Homology CDS 13057 13884 . + 0 ID=cds-WP_037577001.1;Parent=gene-RM672_RS10990;Dbxref=GenBank:WP_037577001.1;Name=WP_037577001.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384564.1;locus_tag=RM672_RS10990;product=pur operon repressor;protein_id=WP_037577001.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 13902 14282 . + . ID=gene-RM672_RS10995;Name=RM672_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10995;old_locus_tag=RM672_10990 NZ_JAVRJS010000010.1 Protein Homology CDS 13902 14282 . + 0 ID=cds-WP_037576999.1;Parent=gene-RM672_RS10995;Dbxref=GenBank:WP_037576999.1;Name=WP_037576999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169426.1;locus_tag=RM672_RS10995;product=RidA family protein;protein_id=WP_037576999.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 14346 14660 . + . ID=gene-RM672_RS11000;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=RM672_RS11000;old_locus_tag=RM672_10995 NZ_JAVRJS010000010.1 Protein Homology CDS 14346 14660 . + 0 ID=cds-WP_037576996.1;Parent=gene-RM672_RS11000;Dbxref=GenBank:WP_037576996.1;Name=WP_037576996.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499048.1;locus_tag=RM672_RS11000;product=septation regulator SpoVG;protein_id=WP_037576996.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 14922 16289 . + . ID=gene-RM672_RS11005;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=RM672_RS11005;old_locus_tag=RM672_11000 NZ_JAVRJS010000010.1 Protein Homology CDS 14922 16289 . + 0 ID=cds-WP_105963480.1;Parent=gene-RM672_RS11005;Dbxref=GenBank:WP_105963480.1;Name=WP_105963480.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=RM672_RS11005;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_105963480.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 16365 17330 . + . ID=gene-RM672_RS11010;Name=RM672_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11010;old_locus_tag=RM672_11005 NZ_JAVRJS010000010.1 Protein Homology CDS 16365 17330 . + 0 ID=cds-WP_037576991.1;Parent=gene-RM672_RS11010;Dbxref=GenBank:WP_037576991.1;Name=WP_037576991.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=RM672_RS11010;product=ribose-phosphate diphosphokinase;protein_id=WP_037576991.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 17469 18143 . + . ID=gene-RM672_RS11015;Name=RM672_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11015;old_locus_tag=RM672_11010 NZ_JAVRJS010000010.1 Protein Homology CDS 17469 18143 . + 0 ID=cds-WP_103159372.1;Parent=gene-RM672_RS11015;Dbxref=GenBank:WP_103159372.1;Name=WP_103159372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465710.1;locus_tag=RM672_RS11015;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_103159372.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 18288 18854 . + . ID=gene-RM672_RS11020;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=RM672_RS11020;old_locus_tag=RM672_11015 NZ_JAVRJS010000010.1 Protein Homology CDS 18288 18854 . + 0 ID=cds-WP_037576985.1;Parent=gene-RM672_RS11020;Dbxref=GenBank:WP_037576985.1;Name=WP_037576985.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451736.1;locus_tag=RM672_RS11020;product=aminoacyl-tRNA hydrolase;protein_id=WP_037576985.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 18866 22366 . + . ID=gene-RM672_RS11025;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=RM672_RS11025;old_locus_tag=RM672_11020 NZ_JAVRJS010000010.1 Protein Homology CDS 18866 22366 . + 0 ID=cds-WP_371874994.1;Parent=gene-RM672_RS11025;Dbxref=GenBank:WP_371874994.1;Name=WP_371874994.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=RM672_RS11025;product=transcription-repair coupling factor;protein_id=WP_371874994.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 22356 23885 . + . ID=gene-RM672_RS11030;Name=RM672_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11030;old_locus_tag=RM672_11025 NZ_JAVRJS010000010.1 Protein Homology CDS 22356 23885 . + 0 ID=cds-WP_037576978.1;Parent=gene-RM672_RS11030;Dbxref=GenBank:WP_037576978.1;Name=WP_037576978.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=RM672_RS11030;product=polysaccharide biosynthesis protein;protein_id=WP_037576978.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 23882 25069 . + . ID=gene-RM672_RS11035;Name=RM672_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11035;old_locus_tag=RM672_11030 NZ_JAVRJS010000010.1 Protein Homology CDS 23882 25069 . + 0 ID=cds-WP_105963482.1;Parent=gene-RM672_RS11035;Dbxref=GenBank:WP_105963482.1;Name=WP_105963482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165012.1;locus_tag=RM672_RS11035;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_105963482.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 25056 25313 . + . ID=gene-RM672_RS11040;Name=RM672_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11040;old_locus_tag=RM672_11035 NZ_JAVRJS010000010.1 Protein Homology CDS 25056 25313 . + 0 ID=cds-WP_037576972.1;Parent=gene-RM672_RS11040;Dbxref=GenBank:WP_037576972.1;Name=WP_037576972.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436795.1;locus_tag=RM672_RS11040;product=RNA-binding S4 domain-containing protein;protein_id=WP_037576972.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 25338 25727 . + . ID=gene-RM672_RS11045;Name=RM672_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11045;old_locus_tag=RM672_11040 NZ_JAVRJS010000010.1 Protein Homology CDS 25338 25727 . + 0 ID=cds-WP_037576970.1;Parent=gene-RM672_RS11045;Dbxref=GenBank:WP_037576970.1;Name=WP_037576970.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303866.1;locus_tag=RM672_RS11045;product=FtsB family cell division protein;protein_id=WP_037576970.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 25947 26324 . + . ID=gene-RM672_RS11050;Name=RM672_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11050;old_locus_tag=RM672_11045 NZ_JAVRJS010000010.1 Protein Homology CDS 25947 26324 . + 0 ID=cds-WP_037576967.1;Parent=gene-RM672_RS11050;Dbxref=GenBank:WP_037576967.1;Name=WP_037576967.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=RM672_RS11050;product=S1 domain-containing RNA-binding protein;protein_id=WP_037576967.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 26394 27677 . + . ID=gene-RM672_RS11055;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=RM672_RS11055;old_locus_tag=RM672_11050 NZ_JAVRJS010000010.1 Protein Homology CDS 26394 27677 . + 0 ID=cds-WP_103159368.1;Parent=gene-RM672_RS11055;Dbxref=GenBank:WP_103159368.1;Name=WP_103159368.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426503.1;locus_tag=RM672_RS11055;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_103159368.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 27667 28206 . + . ID=gene-RM672_RS11060;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=RM672_RS11060;old_locus_tag=RM672_11055 NZ_JAVRJS010000010.1 Protein Homology CDS 27667 28206 . + 0 ID=cds-WP_103159367.1;Parent=gene-RM672_RS11060;Dbxref=GenBank:WP_103159367.1;Name=WP_103159367.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176412.1;locus_tag=RM672_RS11060;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_103159367.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 28352 30496 . + . ID=gene-RM672_RS11065;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=RM672_RS11065;old_locus_tag=RM672_11060 NZ_JAVRJS010000010.1 Protein Homology CDS 28352 30496 . + 0 ID=cds-WP_103159366.1;Parent=gene-RM672_RS11065;Dbxref=GenBank:WP_103159366.1;Name=WP_103159366.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=RM672_RS11065;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_103159366.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 30641 31534 . + . ID=gene-RM672_RS11070;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=RM672_RS11070;old_locus_tag=RM672_11065 NZ_JAVRJS010000010.1 Protein Homology CDS 30641 31534 . + 0 ID=cds-WP_311541485.1;Parent=gene-RM672_RS11070;Dbxref=GenBank:WP_311541485.1;Name=WP_311541485.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484191.1;locus_tag=RM672_RS11070;product=Hsp33 family molecular chaperone HslO;protein_id=WP_311541485.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 31704 32633 . + . ID=gene-RM672_RS11075;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=RM672_RS11075;old_locus_tag=RM672_11070 NZ_JAVRJS010000010.1 Protein Homology CDS 31704 32633 . + 0 ID=cds-WP_311539577.1;Parent=gene-RM672_RS11075;Dbxref=GenBank:WP_311539577.1;Name=WP_311539577.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=RM672_RS11075;product=cysteine synthase A;protein_id=WP_311539577.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 32947 33738 . + . ID=gene-RM672_RS11080;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=RM672_RS11080;old_locus_tag=RM672_11075 NZ_JAVRJS010000010.1 Protein Homology CDS 32947 33738 . + 0 ID=cds-WP_037576946.1;Parent=gene-RM672_RS11080;Dbxref=GenBank:WP_037576946.1;Name=WP_037576946.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=RM672_RS11080;product=dihydropteroate synthase;protein_id=WP_037576946.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 33728 34099 . + . ID=gene-RM672_RS11085;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=RM672_RS11085;old_locus_tag=RM672_11080 NZ_JAVRJS010000010.1 Protein Homology CDS 33728 34099 . + 0 ID=cds-WP_037576943.1;Parent=gene-RM672_RS11085;Dbxref=GenBank:WP_037576943.1;Name=WP_037576943.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426497.1;locus_tag=RM672_RS11085;product=dihydroneopterin aldolase;protein_id=WP_037576943.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 34092 34571 . + . ID=gene-RM672_RS11090;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=RM672_RS11090;old_locus_tag=RM672_11085 NZ_JAVRJS010000010.1 Protein Homology CDS 34092 34571 . + 0 ID=cds-WP_037576940.1;Parent=gene-RM672_RS11090;Dbxref=GenBank:WP_037576940.1;Name=WP_037576940.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499068.1;locus_tag=RM672_RS11090;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_037576940.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 34653 35648 . + . ID=gene-RM672_RS11095;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=RM672_RS11095;old_locus_tag=RM672_11090 NZ_JAVRJS010000010.1 Protein Homology CDS 34653 35648 . + 0 ID=cds-WP_107360563.1;Parent=gene-RM672_RS11095;Dbxref=GenBank:WP_107360563.1;Name=WP_107360563.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=RM672_RS11095;product=tRNA dihydrouridine synthase DusB;protein_id=WP_107360563.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 35668 37155 . + . ID=gene-RM672_RS11100;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=RM672_RS11100;old_locus_tag=RM672_11095 NZ_JAVRJS010000010.1 Protein Homology CDS 35668 37155 . + 0 ID=cds-WP_037576935.1;Parent=gene-RM672_RS11100;Dbxref=GenBank:WP_037576935.1;Name=WP_037576935.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=RM672_RS11100;product=lysine--tRNA ligase;protein_id=WP_037576935.1;transl_table=11 NZ_JAVRJS010000010.1 RefSeq gene 37545 37659 . + . ID=gene-RM672_RS11105;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM672_RS11105;old_locus_tag=RM672_11100 NZ_JAVRJS010000010.1 cmsearch rRNA 37545 37659 . + . ID=rna-RM672_RS11105;Parent=gene-RM672_RS11105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS11105;product=5S ribosomal RNA NZ_JAVRJS010000010.1 cmsearch exon 37545 37659 . + . ID=exon-RM672_RS11105-1;Parent=rna-RM672_RS11105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS11105;product=5S ribosomal RNA NZ_JAVRJS010000010.1 RefSeq gene 37669 37744 . + . ID=gene-RM672_RS11110;Name=RM672_RS11110;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11110;old_locus_tag=RM672_11105 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 37669 37744 . + . ID=rna-RM672_RS11110;Parent=gene-RM672_RS11110;anticodon=(pos:37702..37704);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11110;product=tRNA-Val NZ_JAVRJS010000010.1 tRNAscan-SE exon 37669 37744 . + . ID=exon-RM672_RS11110-1;Parent=rna-RM672_RS11110;anticodon=(pos:37702..37704);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11110;product=tRNA-Val NZ_JAVRJS010000010.1 RefSeq gene 37752 37827 . + . ID=gene-RM672_RS11115;Name=RM672_RS11115;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11115;old_locus_tag=RM672_11110 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 37752 37827 . + . ID=rna-RM672_RS11115;Parent=gene-RM672_RS11115;anticodon=(pos:37785..37787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11115;product=tRNA-Thr NZ_JAVRJS010000010.1 tRNAscan-SE exon 37752 37827 . + . ID=exon-RM672_RS11115-1;Parent=rna-RM672_RS11115;anticodon=(pos:37785..37787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11115;product=tRNA-Thr NZ_JAVRJS010000010.1 RefSeq gene 37835 37907 . + . ID=gene-RM672_RS11120;Name=RM672_RS11120;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11120;old_locus_tag=RM672_11115 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 37835 37907 . + . ID=rna-RM672_RS11120;Parent=gene-RM672_RS11120;anticodon=(pos:37868..37870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11120;product=tRNA-Lys NZ_JAVRJS010000010.1 tRNAscan-SE exon 37835 37907 . + . ID=exon-RM672_RS11120-1;Parent=rna-RM672_RS11120;anticodon=(pos:37868..37870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11120;product=tRNA-Lys NZ_JAVRJS010000010.1 RefSeq gene 37926 38000 . + . ID=gene-RM672_RS11125;Name=RM672_RS11125;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11125;old_locus_tag=RM672_11120 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 37926 38000 . + . ID=rna-RM672_RS11125;Parent=gene-RM672_RS11125;anticodon=(pos:37958..37960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11125;product=tRNA-Gly NZ_JAVRJS010000010.1 tRNAscan-SE exon 37926 38000 . + . ID=exon-RM672_RS11125-1;Parent=rna-RM672_RS11125;anticodon=(pos:37958..37960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11125;product=tRNA-Gly NZ_JAVRJS010000010.1 RefSeq gene 38009 38097 . + . ID=gene-RM672_RS11130;Name=RM672_RS11130;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11130;old_locus_tag=RM672_11125 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 38009 38097 . + . ID=rna-RM672_RS11130;Parent=gene-RM672_RS11130;anticodon=(pos:38043..38045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11130;product=tRNA-Leu NZ_JAVRJS010000010.1 tRNAscan-SE exon 38009 38097 . + . ID=exon-RM672_RS11130-1;Parent=rna-RM672_RS11130;anticodon=(pos:38043..38045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11130;product=tRNA-Leu NZ_JAVRJS010000010.1 RefSeq gene 38107 38183 . + . ID=gene-RM672_RS11135;Name=RM672_RS11135;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11135;old_locus_tag=RM672_11130 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 38107 38183 . + . ID=rna-RM672_RS11135;Parent=gene-RM672_RS11135;anticodon=(pos:38141..38143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11135;product=tRNA-Arg NZ_JAVRJS010000010.1 tRNAscan-SE exon 38107 38183 . + . ID=exon-RM672_RS11135-1;Parent=rna-RM672_RS11135;anticodon=(pos:38141..38143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11135;product=tRNA-Arg NZ_JAVRJS010000010.1 RefSeq gene 38193 38266 . + . ID=gene-RM672_RS11140;Name=RM672_RS11140;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11140;old_locus_tag=RM672_11135 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 38193 38266 . + . ID=rna-RM672_RS11140;Parent=gene-RM672_RS11140;anticodon=(pos:38227..38229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11140;product=tRNA-Pro NZ_JAVRJS010000010.1 tRNAscan-SE exon 38193 38266 . + . ID=exon-RM672_RS11140-1;Parent=rna-RM672_RS11140;anticodon=(pos:38227..38229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11140;product=tRNA-Pro NZ_JAVRJS010000010.1 RefSeq gene 38286 38361 . + . ID=gene-RM672_RS11145;Name=RM672_RS11145;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS11145;old_locus_tag=RM672_11140 NZ_JAVRJS010000010.1 tRNAscan-SE tRNA 38286 38361 . + . ID=rna-RM672_RS11145;Parent=gene-RM672_RS11145;anticodon=(pos:38319..38321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11145;product=tRNA-Ala NZ_JAVRJS010000010.1 tRNAscan-SE exon 38286 38361 . + . ID=exon-RM672_RS11145-1;Parent=rna-RM672_RS11145;anticodon=(pos:38319..38321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS11145;product=tRNA-Ala ##sequence-region NZ_JAVRJS010000011.1 1 30346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000011.1 RefSeq region 1 30346 . + . ID=NZ_JAVRJS010000011.1:1..30346;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000011.1 RefSeq gene 99 335 . + . ID=gene-RM672_RS11150;Name=RM672_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11150;old_locus_tag=RM672_11145 NZ_JAVRJS010000011.1 GeneMarkS-2+ CDS 99 335 . + 0 ID=cds-WP_311541192.1;Parent=gene-RM672_RS11150;Dbxref=GenBank:WP_311541192.1;Name=WP_311541192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11150;product=hypothetical protein;protein_id=WP_311541192.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 434 514 . - . ID=gene-RM672_RS11155;Name=RM672_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11155;old_locus_tag=RM672_11150 NZ_JAVRJS010000011.1 Protein Homology CDS 434 514 . - 0 ID=cds-WP_311541493.1;Parent=gene-RM672_RS11155;Dbxref=GenBank:WP_311541493.1;Name=WP_311541493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024729.7;locus_tag=RM672_RS11155;product=IS3 family transposase;protein_id=WP_311541493.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 500 852 . - . ID=gene-RM672_RS11160;Name=RM672_RS11160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11160;old_locus_tag=RM672_11155;partial=true;pseudo=true;start_range=.,500 NZ_JAVRJS010000011.1 Protein Homology CDS 500 852 . - 0 ID=cds-RM672_RS11160;Parent=gene-RM672_RS11160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=RM672_RS11160;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,500;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 1318 2514 . - . ID=gene-RM672_RS11165;Name=RM672_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11165;old_locus_tag=RM672_11160 NZ_JAVRJS010000011.1 Protein Homology CDS 1318 2514 . - 0 ID=cds-WP_311541193.1;Parent=gene-RM672_RS11165;Dbxref=GenBank:WP_311541193.1;Name=WP_311541193.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=RM672_RS11165;product=MFS transporter;protein_id=WP_311541193.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 2965 3582 . - . ID=gene-RM672_RS11170;Name=RM672_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11170;old_locus_tag=RM672_11165 NZ_JAVRJS010000011.1 Protein Homology CDS 2965 3582 . - 0 ID=cds-WP_311541491.1;Parent=gene-RM672_RS11170;Dbxref=GenBank:WP_311541491.1;Name=WP_311541491.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458044.1;locus_tag=RM672_RS11170;product=LysE/ArgO family amino acid transporter;protein_id=WP_311541491.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 3586 4557 . - . ID=gene-RM672_RS11175;Name=RM672_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11175;old_locus_tag=RM672_11170 NZ_JAVRJS010000011.1 Protein Homology CDS 3586 4557 . - 0 ID=cds-WP_311541196.1;Parent=gene-RM672_RS11175;Dbxref=GenBank:WP_311541196.1;Name=WP_311541196.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053810.1;locus_tag=RM672_RS11175;product=fatty acid desaturase;protein_id=WP_311541196.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 5603 6103 . + . ID=gene-RM672_RS11180;Name=RM672_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11180;old_locus_tag=RM672_11175 NZ_JAVRJS010000011.1 GeneMarkS-2+ CDS 5603 6103 . + 0 ID=cds-WP_311541167.1;Parent=gene-RM672_RS11180;Dbxref=GenBank:WP_311541167.1;Name=WP_311541167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11180;product=hypothetical protein;protein_id=WP_311541167.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 6523 6828 . - . ID=gene-RM672_RS11185;Name=RM672_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11185;old_locus_tag=RM672_11180 NZ_JAVRJS010000011.1 Protein Homology CDS 6523 6828 . - 0 ID=cds-WP_107378013.1;Parent=gene-RM672_RS11185;Dbxref=GenBank:WP_107378013.1;Name=WP_107378013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490323.1;locus_tag=RM672_RS11185;product=hypothetical protein;protein_id=WP_107378013.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 7116 8099 . - . ID=gene-RM672_RS11190;Name=RM672_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11190;old_locus_tag=RM672_11185 NZ_JAVRJS010000011.1 Protein Homology CDS 7116 8099 . - 0 ID=cds-WP_311541169.1;Parent=gene-RM672_RS11190;Dbxref=GenBank:WP_311541169.1;Name=WP_311541169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471380.1;locus_tag=RM672_RS11190;product=replication initiator protein A;protein_id=WP_311541169.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 8761 9657 . + . ID=gene-RM672_RS11195;Name=RM672_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11195;old_locus_tag=RM672_11190 NZ_JAVRJS010000011.1 Protein Homology CDS 8761 9657 . + 0 ID=cds-WP_311542507.1;Parent=gene-RM672_RS11195;Dbxref=GenBank:WP_311542507.1;Name=WP_311542507.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167418.1;locus_tag=RM672_RS11195;product=ParA family protein;protein_id=WP_311542507.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 9650 9964 . + . ID=gene-RM672_RS11200;Name=RM672_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11200;old_locus_tag=RM672_11195 NZ_JAVRJS010000011.1 Protein Homology CDS 9650 9964 . + 0 ID=cds-WP_311541171.1;Parent=gene-RM672_RS11200;Dbxref=GenBank:WP_311541171.1;Name=WP_311541171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167417.1;locus_tag=RM672_RS11200;product=hypothetical protein;protein_id=WP_311541171.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 10286 10540 . + . ID=gene-RM672_RS11205;Name=RM672_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11205;old_locus_tag=RM672_11200 NZ_JAVRJS010000011.1 GeneMarkS-2+ CDS 10286 10540 . + 0 ID=cds-WP_252594875.1;Parent=gene-RM672_RS11205;Dbxref=GenBank:WP_252594875.1;Name=WP_252594875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11205;product=hypothetical protein;protein_id=WP_252594875.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 10600 11436 . + . ID=gene-RM672_RS11210;Name=RM672_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11210;old_locus_tag=RM672_11205 NZ_JAVRJS010000011.1 Protein Homology CDS 10600 11436 . + 0 ID=cds-WP_252594877.1;Parent=gene-RM672_RS11210;Dbxref=GenBank:WP_252594877.1;Name=WP_252594877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528718.1;locus_tag=RM672_RS11210;product=DUF5677 domain-containing protein;protein_id=WP_252594877.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 11475 11630 . + . ID=gene-RM672_RS11215;Name=RM672_RS11215;end_range=11630,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11215;old_locus_tag=RM672_11210;partial=true;pseudo=true;start_range=.,11475 NZ_JAVRJS010000011.1 Protein Homology CDS 11475 11630 . + 0 ID=cds-RM672_RS11215;Parent=gene-RM672_RS11215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=RM672_RS11215;partial=true;product=recombinase family protein;pseudo=true;start_range=.,11475;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 11623 11736 . - . ID=gene-RM672_RS11220;Name=RM672_RS11220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11220;old_locus_tag=RM672_11215;partial=true;pseudo=true;start_range=.,11623 NZ_JAVRJS010000011.1 Protein Homology CDS 11623 11736 . - 0 ID=cds-RM672_RS11220;Parent=gene-RM672_RS11220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105984.1;locus_tag=RM672_RS11220;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,11623;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 12166 13365 . + . ID=gene-RM672_RS11225;Name=RM672_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11225;old_locus_tag=RM672_11220 NZ_JAVRJS010000011.1 Protein Homology CDS 12166 13365 . + 0 ID=cds-WP_446289374.1;Parent=gene-RM672_RS11225;Dbxref=GenBank:WP_446289374.1;Name=WP_446289374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=RM672_RS11225;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_446289374.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 13387 14604 . + . ID=gene-RM672_RS11230;Name=RM672_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11230;old_locus_tag=RM672_11225 NZ_JAVRJS010000011.1 Protein Homology CDS 13387 14604 . + 0 ID=cds-WP_311541173.1;Parent=gene-RM672_RS11230;Dbxref=GenBank:WP_311541173.1;Name=WP_311541173.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM672_RS11230;product=MFS transporter;protein_id=WP_311541173.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 14608 15066 . + . ID=gene-RM672_RS11235;Name=RM672_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11235;old_locus_tag=RM672_11230 NZ_JAVRJS010000011.1 Protein Homology CDS 14608 15066 . + 0 ID=cds-WP_252594884.1;Parent=gene-RM672_RS11235;Dbxref=GenBank:WP_252594884.1;Name=WP_252594884.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM672_RS11235;product=GNAT family N-acetyltransferase;protein_id=WP_252594884.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 15619 16821 . - . ID=gene-RM672_RS11240;Name=RM672_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11240;old_locus_tag=RM672_11235 NZ_JAVRJS010000011.1 Protein Homology CDS 15619 16821 . - 0 ID=cds-WP_311541174.1;Parent=gene-RM672_RS11240;Dbxref=GenBank:WP_311541174.1;Name=WP_311541174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465840.1;locus_tag=RM672_RS11240;product=MFS transporter;protein_id=WP_311541174.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 17087 17965 . + . ID=gene-RM672_RS11245;Name=RM672_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11245;old_locus_tag=RM672_11240 NZ_JAVRJS010000011.1 Protein Homology CDS 17087 17965 . + 0 ID=cds-WP_311541175.1;Parent=gene-RM672_RS11245;Dbxref=GenBank:WP_311541175.1;Name=WP_311541175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04267.2;locus_tag=RM672_RS11245;product=aKG-HExxH-type peptide beta-hydroxylase;protein_id=WP_311541175.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 18031 18705 . - . ID=gene-RM672_RS11250;Name=RM672_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11250;old_locus_tag=RM672_11245 NZ_JAVRJS010000011.1 Protein Homology CDS 18031 18705 . - 0 ID=cds-WP_311541176.1;Parent=gene-RM672_RS11250;Dbxref=GenBank:WP_311541176.1;Name=WP_311541176.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM672_RS11250;product=IS6 family transposase;protein_id=WP_311541176.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 18741 19325 . - . ID=gene-RM672_RS11255;Name=RM672_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11255;old_locus_tag=RM672_11250 NZ_JAVRJS010000011.1 Protein Homology CDS 18741 19325 . - 0 ID=cds-WP_311541177.1;Parent=gene-RM672_RS11255;Dbxref=GenBank:WP_311541177.1;Name=WP_311541177.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504693.1;locus_tag=RM672_RS11255;product=recombinase family protein;protein_id=WP_311541177.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 19723 20190 . + . ID=gene-RM672_RS11260;Name=RM672_RS11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11260;old_locus_tag=RM672_11255;partial=true;pseudo=true;start_range=.,19723 NZ_JAVRJS010000011.1 Protein Homology CDS 19723 20190 . + 0 ID=cds-RM672_RS11260;Parent=gene-RM672_RS11260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635265.1;locus_tag=RM672_RS11260;partial=true;product=recombinase family protein;pseudo=true;start_range=.,19723;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 20282 20581 . + . ID=gene-RM672_RS11265;Name=RM672_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11265;old_locus_tag=RM672_11260 NZ_JAVRJS010000011.1 GeneMarkS-2+ CDS 20282 20581 . + 0 ID=cds-WP_311541178.1;Parent=gene-RM672_RS11265;Dbxref=GenBank:WP_311541178.1;Name=WP_311541178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11265;product=hypothetical protein;protein_id=WP_311541178.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 20654 20890 . - . ID=gene-RM672_RS11500;Name=RM672_RS11500;end_range=20890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11500;partial=true;pseudo=true NZ_JAVRJS010000011.1 Protein Homology CDS 20654 20890 . - 0 ID=cds-RM672_RS11500;Parent=gene-RM672_RS11500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=20890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729285.1;locus_tag=RM672_RS11500;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 21010 21375 . - . ID=gene-RM672_RS11475;Name=RM672_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11475 NZ_JAVRJS010000011.1 Protein Homology CDS 21010 21375 . - 0 ID=cds-WP_375712562.1;Parent=gene-RM672_RS11475;Dbxref=GenBank:WP_375712562.1;Name=WP_375712562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025445.7;locus_tag=RM672_RS11475;product=DUF4260 family protein;protein_id=WP_375712562.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 21958 22119 . - . ID=gene-RM672_RS11270;Name=RM672_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11270;old_locus_tag=RM672_11265 NZ_JAVRJS010000011.1 Protein Homology CDS 21958 22119 . - 0 ID=cds-WP_180706952.1;Parent=gene-RM672_RS11270;Dbxref=GenBank:WP_180706952.1;Name=WP_180706952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167674.1;locus_tag=RM672_RS11270;product=hypothetical protein;protein_id=WP_180706952.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 22151 22506 . - . ID=gene-RM672_RS11275;Name=RM672_RS11275;end_range=22506,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11275;old_locus_tag=RM672_11270;partial=true;pseudo=true NZ_JAVRJS010000011.1 Protein Homology CDS 22151 22506 . - 0 ID=cds-RM672_RS11275;Parent=gene-RM672_RS11275;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;end_range=22506,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109600.1;locus_tag=RM672_RS11275;partial=true;product=protein rep;pseudo=true;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 22685 22786 . - . ID=gene-RM672_RS11280;Name=RM672_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11280;old_locus_tag=RM672_11275 NZ_JAVRJS010000011.1 Protein Homology CDS 22685 22786 . - 0 ID=cds-WP_284570697.1;Parent=gene-RM672_RS11280;Dbxref=GenBank:WP_284570697.1;Name=WP_284570697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM672_RS11280;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_284570697.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 25360 25599 . - . ID=gene-RM672_RS11285;Name=RM672_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11285;old_locus_tag=RM672_11280 NZ_JAVRJS010000011.1 GeneMarkS-2+ CDS 25360 25599 . - 0 ID=cds-WP_311541179.1;Parent=gene-RM672_RS11285;Dbxref=GenBank:WP_311541179.1;Name=WP_311541179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11285;product=hypothetical protein;protein_id=WP_311541179.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 25627 25809 . - . ID=gene-RM672_RS11480;Name=RM672_RS11480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11480;partial=true;pseudo=true;start_range=.,25627 NZ_JAVRJS010000011.1 Protein Homology CDS 25627 25809 . - 0 ID=cds-RM672_RS11480;Parent=gene-RM672_RS11480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.7;locus_tag=RM672_RS11480;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,25627;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 25988 26434 . + . ID=gene-RM672_RS11290;Name=RM672_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11290;old_locus_tag=RM672_11285 NZ_JAVRJS010000011.1 Protein Homology CDS 25988 26434 . + 0 ID=cds-WP_311541180.1;Parent=gene-RM672_RS11290;Dbxref=GenBank:WP_311541180.1;Name=WP_311541180.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024835.7;locus_tag=RM672_RS11290;product=helix-turn-helix domain-containing protein;protein_id=WP_311541180.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq gene 26904 26999 . - . ID=gene-RM672_RS11295;Name=RM672_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11295;old_locus_tag=RM672_11290 NZ_JAVRJS010000011.1 Protein Homology CDS 26904 26999 . - 0 ID=cds-WP_107368147.1;Parent=gene-RM672_RS11295;Dbxref=GenBank:WP_107368147.1;Name=WP_107368147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=RM672_RS11295;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107368147.1;transl_table=11 NZ_JAVRJS010000011.1 RefSeq pseudogene 29714 29851 . + . ID=gene-RM672_RS11485;Name=RM672_RS11485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11485;partial=true;pseudo=true;start_range=.,29714 NZ_JAVRJS010000011.1 Protein Homology CDS 29714 29851 . + 0 ID=cds-RM672_RS11485;Parent=gene-RM672_RS11485;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916431.1;locus_tag=RM672_RS11485;partial=true;product=protein rep;pseudo=true;start_range=.,29714;transl_table=11 ##sequence-region NZ_JAVRJS010000012.1 1 6368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000012.1 RefSeq region 1 6368 . + . ID=NZ_JAVRJS010000012.1:1..6368;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000012.1 RefSeq gene 813 2024 . - . ID=gene-RM672_RS11300;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM672_RS11300;old_locus_tag=RM672_11295 NZ_JAVRJS010000012.1 Protein Homology CDS 813 2024 . - 0 ID=cds-WP_032494831.1;Parent=gene-RM672_RS11300;Dbxref=GenBank:WP_032494831.1;Name=WP_032494831.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF013258.7;locus_tag=RM672_RS11300;product=MobV family relaxase;protein_id=WP_032494831.1;transl_table=11 NZ_JAVRJS010000012.1 RefSeq gene 2445 3179 . + . ID=gene-RM672_RS11305;Name=RM672_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11305;old_locus_tag=RM672_11300 NZ_JAVRJS010000012.1 Protein Homology CDS 2445 3179 . + 0 ID=cds-WP_002345002.1;Parent=gene-RM672_RS11305;Dbxref=GenBank:WP_002345002.1;Name=WP_002345002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011282421.1;locus_tag=RM672_RS11305;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T);protein_id=WP_002345002.1;transl_table=11 NZ_JAVRJS010000012.1 RefSeq gene 3823 5199 . - . ID=gene-RM672_RS11310;Name=tet(L);gbkey=Gene;gene=tet(L);gene_biotype=protein_coding;locus_tag=RM672_RS11310;old_locus_tag=RM672_11305 NZ_JAVRJS010000012.1 Protein Homology CDS 3823 5199 . - 0 ID=cds-WP_001574277.1;Parent=gene-RM672_RS11310;Dbxref=GenBank:WP_001574277.1;Name=WP_001574277.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(L);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574277.1;locus_tag=RM672_RS11310;product=tetracycline efflux MFS transporter Tet(L);protein_id=WP_001574277.1;transl_table=11 NZ_JAVRJS010000012.1 RefSeq gene 5233 5295 . - . ID=gene-RM672_RS11490;Name=RM672_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11490 NZ_JAVRJS010000012.1 Protein Homology CDS 5233 5295 . - 0 ID=cds-WP_012779615.1;Parent=gene-RM672_RS11490;Dbxref=GenBank:WP_012779615.1;Name=WP_012779615.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_167840811.1;locus_tag=RM672_RS11490;product=tetracycline resistance efflux system leader peptide;protein_id=WP_012779615.1;transl_table=11 NZ_JAVRJS010000012.1 RefSeq gene 5399 6259 . - . ID=gene-RM672_RS11315;Name=RM672_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11315;old_locus_tag=RM672_11310 NZ_JAVRJS010000012.1 Protein Homology CDS 5399 6259 . - 0 ID=cds-WP_275691666.1;Parent=gene-RM672_RS11315;Dbxref=GenBank:WP_275691666.1;Name=WP_275691666.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829696.1;locus_tag=RM672_RS11315;product=protein rep;protein_id=WP_275691666.1;transl_table=11 ##sequence-region NZ_JAVRJS010000013.1 1 5707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000013.1 RefSeq region 1 5707 . + . ID=NZ_JAVRJS010000013.1:1..5707;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000013.1 RefSeq gene 1 813 . + . ID=gene-RM672_RS11320;Name=RM672_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11320;old_locus_tag=RM672_11315;partial=true;start_range=.,1 NZ_JAVRJS010000013.1 Protein Homology CDS 1 813 . + 0 ID=cds-WP_311541488.1;Parent=gene-RM672_RS11320;Dbxref=GenBank:WP_311541488.1;Name=WP_311541488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=RM672_RS11320;partial=true;product=Rib/alpha-like domain-containing protein;protein_id=WP_311541488.1;start_range=.,1;transl_table=11 NZ_JAVRJS010000013.1 RefSeq gene 958 2088 . - . ID=gene-RM672_RS11325;Name=RM672_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11325;old_locus_tag=RM672_11320 NZ_JAVRJS010000013.1 Protein Homology CDS 958 2088 . - 0 ID=cds-WP_037577339.1;Parent=gene-RM672_RS11325;Dbxref=GenBank:WP_037577339.1;Name=WP_037577339.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426134.1;locus_tag=RM672_RS11325;product=PucR family transcriptional regulator;protein_id=WP_037577339.1;transl_table=11 NZ_JAVRJS010000013.1 RefSeq gene 2492 5707 . + . ID=gene-RM672_RS11330;Name=RM672_RS11330;end_range=5707,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11330;old_locus_tag=RM672_11325;partial=true NZ_JAVRJS010000013.1 Protein Homology CDS 2492 5707 . + 0 ID=cds-WP_311542509.1;Parent=gene-RM672_RS11330;Dbxref=GenBank:WP_311542509.1;Name=WP_311542509.1;end_range=5707,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM672_RS11330;partial=true;product=Rib/alpha-like domain-containing protein;protein_id=WP_311542509.1;transl_table=11 ##sequence-region NZ_JAVRJS010000014.1 1 3195 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000014.1 RefSeq region 1 3195 . + . ID=NZ_JAVRJS010000014.1:1..3195;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000014.1 RefSeq gene 187 3113 . + . ID=gene-RM672_RS11335;Name=RM672_RS11335;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM672_RS11335;old_locus_tag=RM672_11330 NZ_JAVRJS010000014.1 cmsearch rRNA 187 3113 . + . ID=rna-RM672_RS11335;Parent=gene-RM672_RS11335;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS11335;product=23S ribosomal RNA NZ_JAVRJS010000014.1 cmsearch exon 187 3113 . + . ID=exon-RM672_RS11335-1;Parent=rna-RM672_RS11335;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS11335;product=23S ribosomal RNA ##sequence-region NZ_JAVRJS010000015.1 1 2346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000015.1 RefSeq region 1 2346 . + . ID=NZ_JAVRJS010000015.1:1..2346;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000015.1 RefSeq pseudogene 1 2346 . - . ID=gene-RM672_RS11340;Name=RM672_RS11340;end_range=2346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11340;old_locus_tag=RM672_11335;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJS010000015.1 GeneMarkS-2+ CDS 1 2346 . - 0 ID=cds-RM672_RS11340;Parent=gene-RM672_RS11340;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2346,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11340;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJS010000016.1 1 2162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000016.1 RefSeq region 1 2162 . + . ID=NZ_JAVRJS010000016.1:1..2162;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000016.1 RefSeq pseudogene 1 2162 . - . ID=gene-RM672_RS11345;Name=RM672_RS11345;end_range=2162,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11345;old_locus_tag=RM672_11340;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJS010000016.1 GeneMarkS-2+ CDS 1 2162 . - 0 ID=cds-RM672_RS11345;Parent=gene-RM672_RS11345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2162,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11345;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJS010000017.1 1 1920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000017.1 RefSeq region 1 1920 . + . ID=NZ_JAVRJS010000017.1:1..1920;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000017.1 RefSeq gene 322 522 . - . ID=gene-RM672_RS11350;Name=RM672_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11350;old_locus_tag=RM672_11345 NZ_JAVRJS010000017.1 Protein Homology CDS 322 522 . - 0 ID=cds-WP_031795395.1;Parent=gene-RM672_RS11350;Dbxref=GenBank:WP_031795395.1;Name=WP_031795395.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477819.1;locus_tag=RM672_RS11350;product=cold-shock protein;protein_id=WP_031795395.1;transl_table=11 NZ_JAVRJS010000017.1 RefSeq gene 1132 1674 . + . ID=gene-RM672_RS11355;Name=RM672_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11355;old_locus_tag=RM672_11350 NZ_JAVRJS010000017.1 GeneMarkS-2+ CDS 1132 1674 . + 0 ID=cds-WP_107368149.1;Parent=gene-RM672_RS11355;Dbxref=GenBank:WP_107368149.1;Name=WP_107368149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11355;product=hypothetical protein;protein_id=WP_107368149.1;transl_table=11 ##sequence-region NZ_JAVRJS010000018.1 1 1516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000018.1 RefSeq region 1 1516 . + . ID=NZ_JAVRJS010000018.1:1..1516;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000018.1 RefSeq gene 1 1516 . + . ID=gene-RM672_RS11360;Name=RM672_RS11360;end_range=1516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11360;old_locus_tag=RM672_11355;partial=true;start_range=.,1 NZ_JAVRJS010000018.1 Protein Homology CDS 1 1516 . + 0 ID=cds-WP_311542510.1;Parent=gene-RM672_RS11360;Dbxref=GenBank:WP_311542510.1;Name=WP_311542510.1;end_range=1516,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM672_RS11360;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311542510.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJS010000019.1 1 1306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000019.1 RefSeq region 1 1306 . + . ID=NZ_JAVRJS010000019.1:1..1306;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000019.1 RefSeq gene 41 1306 . - . ID=gene-RM672_RS11365;Name=RM672_RS11365;end_range=1306,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM672_RS11365;old_locus_tag=RM672_11360;partial=true NZ_JAVRJS010000019.1 cmsearch rRNA 41 1306 . - . ID=rna-RM672_RS11365;Parent=gene-RM672_RS11365;Dbxref=RFAM:RF00177;end_range=1306,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS11365;partial=true;product=16S ribosomal RNA NZ_JAVRJS010000019.1 cmsearch exon 41 1306 . - . ID=exon-RM672_RS11365-1;Parent=rna-RM672_RS11365;Dbxref=RFAM:RF00177;end_range=1306,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS11365;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JAVRJS010000001.1 1 702652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000001.1 RefSeq region 1 702652 . + . ID=NZ_JAVRJS010000001.1:1..702652;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000001.1 RefSeq gene 94 167 . + . ID=gene-RM672_RS00005;Name=RM672_RS00005;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00005;old_locus_tag=RM672_00005 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 94 167 . + . ID=rna-RM672_RS00005;Parent=gene-RM672_RS00005;anticodon=(pos:128..130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00005;product=tRNA-Met NZ_JAVRJS010000001.1 tRNAscan-SE exon 94 167 . + . ID=exon-RM672_RS00005-1;Parent=rna-RM672_RS00005;anticodon=(pos:128..130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00005;product=tRNA-Met NZ_JAVRJS010000001.1 RefSeq gene 179 255 . + . ID=gene-RM672_RS00010;Name=RM672_RS00010;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00010;old_locus_tag=RM672_00010 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 179 255 . + . ID=rna-RM672_RS00010;Parent=gene-RM672_RS00010;anticodon=(pos:213..215);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00010;product=tRNA-Asp NZ_JAVRJS010000001.1 tRNAscan-SE exon 179 255 . + . ID=exon-RM672_RS00010-1;Parent=rna-RM672_RS00010;anticodon=(pos:213..215);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00010;product=tRNA-Asp NZ_JAVRJS010000001.1 RefSeq gene 266 341 . + . ID=gene-RM672_RS00015;Name=RM672_RS00015;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00015;old_locus_tag=RM672_00015 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 266 341 . + . ID=rna-RM672_RS00015;Parent=gene-RM672_RS00015;anticodon=(pos:299..301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00015;product=tRNA-Phe NZ_JAVRJS010000001.1 tRNAscan-SE exon 266 341 . + . ID=exon-RM672_RS00015-1;Parent=rna-RM672_RS00015;anticodon=(pos:299..301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00015;product=tRNA-Phe NZ_JAVRJS010000001.1 RefSeq gene 356 431 . + . ID=gene-RM672_RS00020;Name=RM672_RS00020;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00020;old_locus_tag=RM672_00020 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 356 431 . + . ID=rna-RM672_RS00020;Parent=gene-RM672_RS00020;anticodon=(pos:389..391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00020;product=tRNA-Thr NZ_JAVRJS010000001.1 tRNAscan-SE exon 356 431 . + . ID=exon-RM672_RS00020-1;Parent=rna-RM672_RS00020;anticodon=(pos:389..391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00020;product=tRNA-Thr NZ_JAVRJS010000001.1 RefSeq gene 437 520 . + . ID=gene-RM672_RS00025;Name=RM672_RS00025;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00025;old_locus_tag=RM672_00025 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 437 520 . + . ID=rna-RM672_RS00025;Parent=gene-RM672_RS00025;anticodon=(pos:471..473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00025;product=tRNA-Tyr NZ_JAVRJS010000001.1 tRNAscan-SE exon 437 520 . + . ID=exon-RM672_RS00025-1;Parent=rna-RM672_RS00025;anticodon=(pos:471..473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00025;product=tRNA-Tyr NZ_JAVRJS010000001.1 RefSeq gene 528 601 . + . ID=gene-RM672_RS00030;Name=RM672_RS00030;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00030;old_locus_tag=RM672_00030 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 528 601 . + . ID=rna-RM672_RS00030;Parent=gene-RM672_RS00030;anticodon=(pos:560..562);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00030;product=tRNA-Trp NZ_JAVRJS010000001.1 tRNAscan-SE exon 528 601 . + . ID=exon-RM672_RS00030-1;Parent=rna-RM672_RS00030;anticodon=(pos:560..562);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00030;product=tRNA-Trp NZ_JAVRJS010000001.1 RefSeq gene 604 676 . + . ID=gene-RM672_RS00035;Name=RM672_RS00035;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00035;old_locus_tag=RM672_00035 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 604 676 . + . ID=rna-RM672_RS00035;Parent=gene-RM672_RS00035;anticodon=(pos:637..639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00035;product=tRNA-His NZ_JAVRJS010000001.1 tRNAscan-SE exon 604 676 . + . ID=exon-RM672_RS00035-1;Parent=rna-RM672_RS00035;anticodon=(pos:637..639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00035;product=tRNA-His NZ_JAVRJS010000001.1 RefSeq gene 693 764 . + . ID=gene-RM672_RS00040;Name=RM672_RS00040;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00040;old_locus_tag=RM672_00040 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 693 764 . + . ID=rna-RM672_RS00040;Parent=gene-RM672_RS00040;anticodon=(pos:725..727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00040;product=tRNA-Gln NZ_JAVRJS010000001.1 tRNAscan-SE exon 693 764 . + . ID=exon-RM672_RS00040-1;Parent=rna-RM672_RS00040;anticodon=(pos:725..727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00040;product=tRNA-Gln NZ_JAVRJS010000001.1 RefSeq gene 773 847 . + . ID=gene-RM672_RS00045;Name=RM672_RS00045;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00045;old_locus_tag=RM672_00045 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 773 847 . + . ID=rna-RM672_RS00045;Parent=gene-RM672_RS00045;anticodon=(pos:805..807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00045;product=tRNA-Cys NZ_JAVRJS010000001.1 tRNAscan-SE exon 773 847 . + . ID=exon-RM672_RS00045-1;Parent=rna-RM672_RS00045;anticodon=(pos:805..807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00045;product=tRNA-Cys NZ_JAVRJS010000001.1 RefSeq gene 859 933 . + . ID=gene-RM672_RS00050;Name=RM672_RS00050;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00050;old_locus_tag=RM672_00050 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 859 933 . + . ID=rna-RM672_RS00050;Parent=gene-RM672_RS00050;anticodon=(pos:892..894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00050;product=tRNA-Gly NZ_JAVRJS010000001.1 tRNAscan-SE exon 859 933 . + . ID=exon-RM672_RS00050-1;Parent=rna-RM672_RS00050;anticodon=(pos:892..894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00050;product=tRNA-Gly NZ_JAVRJS010000001.1 RefSeq gene 958 1032 . + . ID=gene-RM672_RS00055;Name=RM672_RS00055;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00055;old_locus_tag=RM672_00055 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 958 1032 . + . ID=rna-RM672_RS00055;Parent=gene-RM672_RS00055;anticodon=(pos:991..993);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00055;product=tRNA-Gly NZ_JAVRJS010000001.1 tRNAscan-SE exon 958 1032 . + . ID=exon-RM672_RS00055-1;Parent=rna-RM672_RS00055;anticodon=(pos:991..993);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00055;product=tRNA-Gly NZ_JAVRJS010000001.1 RefSeq gene 1070 1153 . + . ID=gene-RM672_RS00060;Name=RM672_RS00060;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00060;old_locus_tag=RM672_00060 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 1070 1153 . + . ID=rna-RM672_RS00060;Parent=gene-RM672_RS00060;anticodon=(pos:1104..1106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00060;product=tRNA-Leu NZ_JAVRJS010000001.1 tRNAscan-SE exon 1070 1153 . + . ID=exon-RM672_RS00060-1;Parent=rna-RM672_RS00060;anticodon=(pos:1104..1106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00060;product=tRNA-Leu NZ_JAVRJS010000001.1 RefSeq gene 1580 2083 . + . ID=gene-RM672_RS00065;Name=RM672_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00065;old_locus_tag=RM672_00065 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 1580 2083 . + 0 ID=cds-WP_103159615.1;Parent=gene-RM672_RS00065;Dbxref=GenBank:WP_103159615.1;Name=WP_103159615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00065;product=hypothetical protein;protein_id=WP_103159615.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 2127 3185 . + . ID=gene-RM672_RS00070;Name=RM672_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00070;old_locus_tag=RM672_00070 NZ_JAVRJS010000001.1 Protein Homology CDS 2127 3185 . + 0 ID=cds-WP_037577252.1;Parent=gene-RM672_RS00070;Dbxref=GenBank:WP_037577252.1;Name=WP_037577252.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449624.1;locus_tag=RM672_RS00070;product=PTS sugar transporter subunit IIC;protein_id=WP_037577252.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 3315 4772 . + . ID=gene-RM672_RS00075;Name=RM672_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00075;old_locus_tag=RM672_00075 NZ_JAVRJS010000001.1 Protein Homology CDS 3315 4772 . + 0 ID=cds-WP_037577250.1;Parent=gene-RM672_RS00075;Dbxref=GenBank:WP_037577250.1;Name=WP_037577250.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471143.1;locus_tag=RM672_RS00075;product=ABC transporter substrate-binding protein/permease;protein_id=WP_037577250.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 4765 5487 . + . ID=gene-RM672_RS00080;Name=RM672_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00080;old_locus_tag=RM672_00080 NZ_JAVRJS010000001.1 Protein Homology CDS 4765 5487 . + 0 ID=cds-WP_037577247.1;Parent=gene-RM672_RS00080;Dbxref=GenBank:WP_037577247.1;Name=WP_037577247.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638026.1;locus_tag=RM672_RS00080;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_037577247.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 5775 6908 . + . ID=gene-RM672_RS00085;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=RM672_RS00085;old_locus_tag=RM672_00085 NZ_JAVRJS010000001.1 Protein Homology CDS 5775 6908 . + 0 ID=cds-WP_037577244.1;Parent=gene-RM672_RS00085;Dbxref=GenBank:WP_037577244.1;Name=WP_037577244.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364869.1;locus_tag=RM672_RS00085;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_037577244.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 6905 7375 . + . ID=gene-RM672_RS00090;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=RM672_RS00090;old_locus_tag=RM672_00090 NZ_JAVRJS010000001.1 Protein Homology CDS 6905 7375 . + 0 ID=cds-WP_037577242.1;Parent=gene-RM672_RS00090;Dbxref=GenBank:WP_037577242.1;Name=WP_037577242.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=RM672_RS00090;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_037577242.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 7393 8562 . + . ID=gene-RM672_RS00095;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM672_RS00095;old_locus_tag=RM672_00095 NZ_JAVRJS010000001.1 Protein Homology CDS 7393 8562 . + 0 ID=cds-WP_311541216.1;Parent=gene-RM672_RS00095;Dbxref=GenBank:WP_311541216.1;Name=WP_311541216.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468253.1;locus_tag=RM672_RS00095;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_311541216.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 8581 9180 . + . ID=gene-RM672_RS00100;Name=RM672_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00100;old_locus_tag=RM672_00100 NZ_JAVRJS010000001.1 Protein Homology CDS 8581 9180 . + 0 ID=cds-WP_037577237.1;Parent=gene-RM672_RS00100;Dbxref=GenBank:WP_037577237.1;Name=WP_037577237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808097.1;locus_tag=RM672_RS00100;product=6-phosphogluconolactonase;protein_id=WP_037577237.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 9198 9362 . + . ID=gene-RM672_RS00105;Name=RM672_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00105;old_locus_tag=RM672_00105 NZ_JAVRJS010000001.1 Protein Homology CDS 9198 9362 . + 0 ID=cds-WP_157946143.1;Parent=gene-RM672_RS00105;Dbxref=GenBank:WP_157946143.1;Name=WP_157946143.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=RM672_RS00105;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_157946143.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 9462 9872 . + . ID=gene-RM672_RS00110;Name=RM672_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00110;old_locus_tag=RM672_00110 NZ_JAVRJS010000001.1 Protein Homology CDS 9462 9872 . + 0 ID=cds-WP_037577235.1;Parent=gene-RM672_RS00110;Dbxref=GenBank:WP_037577235.1;Name=WP_037577235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474495.1;locus_tag=RM672_RS00110;product=hypothetical protein;protein_id=WP_037577235.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 10017 11402 . + . ID=gene-RM672_RS00115;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=RM672_RS00115;old_locus_tag=RM672_00115 NZ_JAVRJS010000001.1 Protein Homology CDS 10017 11402 . + 0 ID=cds-WP_037577233.1;Parent=gene-RM672_RS00115;Dbxref=GenBank:WP_037577233.1;Name=WP_037577233.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=RM672_RS00115;product=class II fumarate hydratase;protein_id=WP_037577233.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 11424 12950 . + . ID=gene-RM672_RS00120;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=RM672_RS00120;old_locus_tag=RM672_00120 NZ_JAVRJS010000001.1 Protein Homology CDS 11424 12950 . + 0 ID=cds-WP_037577232.1;Parent=gene-RM672_RS00120;Dbxref=GenBank:WP_037577232.1;Name=WP_037577232.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302401.1;locus_tag=RM672_RS00120;product=exopolyphosphatase;protein_id=WP_037577232.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 13043 15205 . + . ID=gene-RM672_RS00125;Name=RM672_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00125;old_locus_tag=RM672_00125 NZ_JAVRJS010000001.1 Protein Homology CDS 13043 15205 . + 0 ID=cds-WP_037577230.1;Parent=gene-RM672_RS00125;Dbxref=GenBank:WP_037577230.1;Name=WP_037577230.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384147.1;locus_tag=RM672_RS00125;product=RNA degradosome polyphosphate kinase;protein_id=WP_037577230.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 15244 16074 . - . ID=gene-RM672_RS00130;Name=RM672_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00130;old_locus_tag=RM672_00130 NZ_JAVRJS010000001.1 Protein Homology CDS 15244 16074 . - 0 ID=cds-WP_037577228.1;Parent=gene-RM672_RS00130;Dbxref=GenBank:WP_037577228.1;Name=WP_037577228.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=RM672_RS00130;product=RluA family pseudouridine synthase;protein_id=WP_037577228.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 16288 17409 . + . ID=gene-RM672_RS00135;Name=RM672_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00135;old_locus_tag=RM672_00135 NZ_JAVRJS010000001.1 Protein Homology CDS 16288 17409 . + 0 ID=cds-WP_037577226.1;Parent=gene-RM672_RS00135;Dbxref=GenBank:WP_037577226.1;Name=WP_037577226.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384143.1;locus_tag=RM672_RS00135;product=GAF domain-containing sensor histidine kinase;protein_id=WP_037577226.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 17410 18036 . + . ID=gene-RM672_RS00140;Name=RM672_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00140;old_locus_tag=RM672_00140 NZ_JAVRJS010000001.1 Protein Homology CDS 17410 18036 . + 0 ID=cds-WP_037577223.1;Parent=gene-RM672_RS00140;Dbxref=GenBank:WP_037577223.1;Name=WP_037577223.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443556.1;locus_tag=RM672_RS00140;product=response regulator;protein_id=WP_037577223.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 18392 21481 . + . ID=gene-RM672_RS00145;Name=RM672_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00145;old_locus_tag=RM672_00145 NZ_JAVRJS010000001.1 Protein Homology CDS 18392 21481 . + 0 ID=cds-WP_311541217.1;Parent=gene-RM672_RS00145;Dbxref=GenBank:WP_311541217.1;Name=WP_311541217.1;Ontology_term=GO:0007155,GO:0098630,GO:0001968,GO:0070051;gbkey=CDS;go_function=fibronectin binding|0001968||IEA,fibrinogen binding|0070051||IEA;go_process=cell adhesion|0007155||IEA,aggregation of unicellular organisms|0098630||IEA;inference=COORDINATES: protein motif:HMM:NF021909.8;locus_tag=RM672_RS00145;product=fibronectin-binding protein FnbA;protein_id=WP_311541217.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 21571 22446 . - . ID=gene-RM672_RS00150;Name=RM672_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00150;old_locus_tag=RM672_00150 NZ_JAVRJS010000001.1 Protein Homology CDS 21571 22446 . - 0 ID=cds-WP_107364042.1;Parent=gene-RM672_RS00150;Dbxref=GenBank:WP_107364042.1;Name=WP_107364042.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425458.1;locus_tag=RM672_RS00150;product=cation diffusion facilitator family transporter;protein_id=WP_107364042.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 22727 25126 . + . ID=gene-RM672_RS00155;Name=RM672_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00155;old_locus_tag=RM672_00155 NZ_JAVRJS010000001.1 Protein Homology CDS 22727 25126 . + 0 ID=cds-WP_311541218.1;Parent=gene-RM672_RS00155;Dbxref=GenBank:WP_311541218.1;Name=WP_311541218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037690.7;locus_tag=RM672_RS00155;product=Ig-like domain-containing protein;protein_id=WP_311541218.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 25339 26625 . + . ID=gene-RM672_RS00160;Name=RM672_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00160;old_locus_tag=RM672_00160 NZ_JAVRJS010000001.1 Protein Homology CDS 25339 26625 . + 0 ID=cds-WP_233654851.1;Parent=gene-RM672_RS00160;Dbxref=GenBank:WP_233654851.1;Name=WP_233654851.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=RM672_RS00160;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_233654851.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 26714 27109 . - . ID=gene-RM672_RS00165;Name=RM672_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00165;old_locus_tag=RM672_00165 NZ_JAVRJS010000001.1 Protein Homology CDS 26714 27109 . - 0 ID=cds-WP_233654852.1;Parent=gene-RM672_RS00165;Dbxref=GenBank:WP_233654852.1;Name=WP_233654852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614928.1;locus_tag=RM672_RS00165;product=hypothetical protein;protein_id=WP_233654852.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 27400 27705 . + . ID=gene-RM672_RS00170;Name=RM672_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00170;old_locus_tag=RM672_00170 NZ_JAVRJS010000001.1 Protein Homology CDS 27400 27705 . + 0 ID=cds-WP_105963607.1;Parent=gene-RM672_RS00170;Dbxref=GenBank:WP_105963607.1;Name=WP_105963607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014980.7;locus_tag=RM672_RS00170;product=fibronectin binding protein;protein_id=WP_105963607.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 27650 27970 . + . ID=gene-RM672_RS00175;Name=RM672_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00175;old_locus_tag=RM672_00175 NZ_JAVRJS010000001.1 Protein Homology CDS 27650 27970 . + 0 ID=cds-WP_103159565.1;Parent=gene-RM672_RS00175;Dbxref=GenBank:WP_103159565.1;Name=WP_103159565.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM672_RS00175;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_103159565.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 28655 28867 . + . ID=gene-RM672_RS00180;Name=RM672_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00180;old_locus_tag=RM672_00180 NZ_JAVRJS010000001.1 Protein Homology CDS 28655 28867 . + 0 ID=cds-WP_037574590.1;Parent=gene-RM672_RS00180;Dbxref=GenBank:WP_037574590.1;Name=WP_037574590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=RM672_RS00180;product=DUF6007 family protein;protein_id=WP_037574590.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 28991 29236 . - . ID=gene-RM672_RS00185;Name=RM672_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00185;old_locus_tag=RM672_00185 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 28991 29236 . - 0 ID=cds-WP_103159566.1;Parent=gene-RM672_RS00185;Dbxref=GenBank:WP_103159566.1;Name=WP_103159566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00185;product=hypothetical protein;protein_id=WP_103159566.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 29626 30090 . + . ID=gene-RM672_RS00190;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=RM672_RS00190;old_locus_tag=RM672_00190 NZ_JAVRJS010000001.1 Protein Homology CDS 29626 30090 . + 0 ID=cds-WP_037574584.1;Parent=gene-RM672_RS00190;Dbxref=GenBank:WP_037574584.1;Name=WP_037574584.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=RM672_RS00190;product=XRE family transcriptional regulator XdrA;protein_id=WP_037574584.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 30247 31377 . + . ID=gene-RM672_RS00195;Name=RM672_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00195;old_locus_tag=RM672_00195 NZ_JAVRJS010000001.1 Protein Homology CDS 30247 31377 . + 0 ID=cds-WP_233654853.1;Parent=gene-RM672_RS00195;Dbxref=GenBank:WP_233654853.1;Name=WP_233654853.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275417.1;locus_tag=RM672_RS00195;product=DUF445 domain-containing protein;protein_id=WP_233654853.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 31464 31808 . + . ID=gene-RM672_RS00200;Name=RM672_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00200;old_locus_tag=RM672_00200 NZ_JAVRJS010000001.1 Protein Homology CDS 31464 31808 . + 0 ID=cds-WP_105963604.1;Parent=gene-RM672_RS00200;Dbxref=GenBank:WP_105963604.1;Name=WP_105963604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=RM672_RS00200;product=YlbF/YmcA family competence regulator;protein_id=WP_105963604.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 32030 33217 . + . ID=gene-RM672_RS00205;Name=RM672_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00205;old_locus_tag=RM672_00205 NZ_JAVRJS010000001.1 Protein Homology CDS 32030 33217 . + 0 ID=cds-WP_107372176.1;Parent=gene-RM672_RS00205;Dbxref=GenBank:WP_107372176.1;Name=WP_107372176.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=RM672_RS00205;product=metallophosphoesterase family protein;protein_id=WP_107372176.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 33221 36148 . + . ID=gene-RM672_RS00210;Name=RM672_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00210;old_locus_tag=RM672_00210 NZ_JAVRJS010000001.1 Protein Homology CDS 33221 36148 . + 0 ID=cds-WP_311541219.1;Parent=gene-RM672_RS00210;Dbxref=GenBank:WP_311541219.1;Name=WP_311541219.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=RM672_RS00210;product=AAA family ATPase;protein_id=WP_311541219.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 36167 37108 . + . ID=gene-RM672_RS00215;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=RM672_RS00215;old_locus_tag=RM672_00215 NZ_JAVRJS010000001.1 Protein Homology CDS 36167 37108 . + 0 ID=cds-WP_037574571.1;Parent=gene-RM672_RS00215;Dbxref=GenBank:WP_037574571.1;Name=WP_037574571.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=RM672_RS00215;product=3'-5' exoribonuclease YhaM;protein_id=WP_037574571.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 37423 38397 . - . ID=gene-RM672_RS00220;Name=RM672_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00220;old_locus_tag=RM672_00220 NZ_JAVRJS010000001.1 Protein Homology CDS 37423 38397 . - 0 ID=cds-WP_311539797.1;Parent=gene-RM672_RS00220;Dbxref=GenBank:WP_311539797.1;Name=WP_311539797.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425447.1;locus_tag=RM672_RS00220;product=foldase protein PrsA;protein_id=WP_311539797.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 38607 39146 . - . ID=gene-RM672_RS00225;Name=RM672_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00225;old_locus_tag=RM672_00225 NZ_JAVRJS010000001.1 Protein Homology CDS 38607 39146 . - 0 ID=cds-WP_103159571.1;Parent=gene-RM672_RS00225;Dbxref=GenBank:WP_103159571.1;Name=WP_103159571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466819.1;locus_tag=RM672_RS00225;product=DUF3267 domain-containing protein;protein_id=WP_103159571.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 39199 39729 . - . ID=gene-RM672_RS00230;Name=RM672_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00230;old_locus_tag=RM672_00230 NZ_JAVRJS010000001.1 Protein Homology CDS 39199 39729 . - 0 ID=cds-WP_107366551.1;Parent=gene-RM672_RS00230;Dbxref=GenBank:WP_107366551.1;Name=WP_107366551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=RM672_RS00230;product=HTH-type transcriptional regulator Hpr;protein_id=WP_107366551.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 39829 40185 . - . ID=gene-RM672_RS00235;Name=RM672_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00235;old_locus_tag=RM672_00235 NZ_JAVRJS010000001.1 Protein Homology CDS 39829 40185 . - 0 ID=cds-WP_037574561.1;Parent=gene-RM672_RS00235;Dbxref=GenBank:WP_037574561.1;Name=WP_037574561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=RM672_RS00235;product=YtxH domain-containing protein;protein_id=WP_037574561.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 40270 40695 . - . ID=gene-RM672_RS00240;Name=RM672_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00240;old_locus_tag=RM672_00240 NZ_JAVRJS010000001.1 Protein Homology CDS 40270 40695 . - 0 ID=cds-WP_105963600.1;Parent=gene-RM672_RS00240;Dbxref=GenBank:WP_105963600.1;Name=WP_105963600.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=RM672_RS00240;product=HIT family protein;protein_id=WP_105963600.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 40824 41561 . + . ID=gene-RM672_RS00245;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=RM672_RS00245;old_locus_tag=RM672_00245 NZ_JAVRJS010000001.1 Protein Homology CDS 40824 41561 . + 0 ID=cds-WP_311541220.1;Parent=gene-RM672_RS00245;Dbxref=GenBank:WP_311541220.1;Name=WP_311541220.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507255.1;locus_tag=RM672_RS00245;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_311541220.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 41558 42772 . + . ID=gene-RM672_RS00250;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=RM672_RS00250;old_locus_tag=RM672_00250 NZ_JAVRJS010000001.1 Protein Homology CDS 41558 42772 . + 0 ID=cds-WP_311539795.1;Parent=gene-RM672_RS00250;Dbxref=GenBank:WP_311539795.1;Name=WP_311539795.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=RM672_RS00250;product=ABC transporter permease EcsB;protein_id=WP_311539795.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 43029 43565 . - . ID=gene-RM672_RS00255;Name=RM672_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00255;old_locus_tag=RM672_00255 NZ_JAVRJS010000001.1 Protein Homology CDS 43029 43565 . - 0 ID=cds-WP_037574551.1;Parent=gene-RM672_RS00255;Dbxref=GenBank:WP_037574551.1;Name=WP_037574551.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425440.1;locus_tag=RM672_RS00255;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_037574551.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 43762 44805 . + . ID=gene-RM672_RS00260;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=RM672_RS00260;old_locus_tag=RM672_00260 NZ_JAVRJS010000001.1 Protein Homology CDS 43762 44805 . + 0 ID=cds-WP_311539794.1;Parent=gene-RM672_RS00260;Dbxref=GenBank:WP_311539794.1;Name=WP_311539794.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164994.1;locus_tag=RM672_RS00260;product=uroporphyrinogen decarboxylase;protein_id=WP_311539794.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 44827 45759 . + . ID=gene-RM672_RS00265;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=RM672_RS00265;old_locus_tag=RM672_00265 NZ_JAVRJS010000001.1 Protein Homology CDS 44827 45759 . + 0 ID=cds-WP_311539793.1;Parent=gene-RM672_RS00265;Dbxref=GenBank:WP_311539793.1;Name=WP_311539793.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=RM672_RS00265;product=ferrochelatase;protein_id=WP_311539793.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 45765 47162 . + . ID=gene-RM672_RS00270;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=RM672_RS00270;old_locus_tag=RM672_00270 NZ_JAVRJS010000001.1 Protein Homology CDS 45765 47162 . + 0 ID=cds-WP_037574545.1;Parent=gene-RM672_RS00270;Dbxref=GenBank:WP_037574545.1;Name=WP_037574545.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=protoporphyrinogen oxidase activity%2C oxygen as acceptor|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=RM672_RS00270;product=protoporphyrinogen oxidase;protein_id=WP_037574545.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 47487 48041 . + . ID=gene-RM672_RS00275;Name=RM672_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00275;old_locus_tag=RM672_00275 NZ_JAVRJS010000001.1 Protein Homology CDS 47487 48041 . + 0 ID=cds-WP_037574544.1;Parent=gene-RM672_RS00275;Dbxref=GenBank:WP_037574544.1;Name=WP_037574544.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=RM672_RS00275;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_037574544.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 48209 48283 . + . ID=gene-RM672_RS00280;Name=RM672_RS00280;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00280;old_locus_tag=RM672_00280 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48209 48283 . + . ID=rna-RM672_RS00280;Parent=gene-RM672_RS00280;anticodon=(pos:48242..48244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00280;product=tRNA-Glu NZ_JAVRJS010000001.1 tRNAscan-SE exon 48209 48283 . + . ID=exon-RM672_RS00280-1;Parent=rna-RM672_RS00280;anticodon=(pos:48242..48244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00280;product=tRNA-Glu NZ_JAVRJS010000001.1 RefSeq gene 48381 48454 . + . ID=gene-RM672_RS00285;Name=RM672_RS00285;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00285;old_locus_tag=RM672_00285 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48381 48454 . + . ID=rna-RM672_RS00285;Parent=gene-RM672_RS00285;anticodon=(pos:48415..48417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00285;product=tRNA-Met NZ_JAVRJS010000001.1 tRNAscan-SE exon 48381 48454 . + . ID=exon-RM672_RS00285-1;Parent=rna-RM672_RS00285;anticodon=(pos:48415..48417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00285;product=tRNA-Met NZ_JAVRJS010000001.1 RefSeq gene 48466 48542 . + . ID=gene-RM672_RS00290;Name=RM672_RS00290;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00290;old_locus_tag=RM672_00290 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48466 48542 . + . ID=rna-RM672_RS00290;Parent=gene-RM672_RS00290;anticodon=(pos:48500..48502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00290;product=tRNA-Asp NZ_JAVRJS010000001.1 tRNAscan-SE exon 48466 48542 . + . ID=exon-RM672_RS00290-1;Parent=rna-RM672_RS00290;anticodon=(pos:48500..48502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00290;product=tRNA-Asp NZ_JAVRJS010000001.1 RefSeq gene 48553 48625 . + . ID=gene-RM672_RS00295;Name=RM672_RS00295;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00295;old_locus_tag=RM672_00295 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48553 48625 . + . ID=rna-RM672_RS00295;Parent=gene-RM672_RS00295;anticodon=(pos:48586..48588);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00295;product=tRNA-Phe NZ_JAVRJS010000001.1 tRNAscan-SE exon 48553 48625 . + . ID=exon-RM672_RS00295-1;Parent=rna-RM672_RS00295;anticodon=(pos:48586..48588);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00295;product=tRNA-Phe NZ_JAVRJS010000001.1 RefSeq gene 48638 48710 . + . ID=gene-RM672_RS00300;Name=RM672_RS00300;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00300;old_locus_tag=RM672_00300 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48638 48710 . + . ID=rna-RM672_RS00300;Parent=gene-RM672_RS00300;anticodon=(pos:48671..48673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00300;product=tRNA-His NZ_JAVRJS010000001.1 tRNAscan-SE exon 48638 48710 . + . ID=exon-RM672_RS00300-1;Parent=rna-RM672_RS00300;anticodon=(pos:48671..48673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00300;product=tRNA-His NZ_JAVRJS010000001.1 RefSeq gene 48724 48797 . + . ID=gene-RM672_RS00305;Name=RM672_RS00305;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00305;old_locus_tag=RM672_00305 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48724 48797 . + . ID=rna-RM672_RS00305;Parent=gene-RM672_RS00305;anticodon=(pos:48756..48758);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00305;product=tRNA-Gly NZ_JAVRJS010000001.1 tRNAscan-SE exon 48724 48797 . + . ID=exon-RM672_RS00305-1;Parent=rna-RM672_RS00305;anticodon=(pos:48756..48758);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00305;product=tRNA-Gly NZ_JAVRJS010000001.1 RefSeq gene 48807 48881 . + . ID=gene-RM672_RS00310;Name=RM672_RS00310;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00310;old_locus_tag=RM672_00310 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48807 48881 . + . ID=rna-RM672_RS00310;Parent=gene-RM672_RS00310;anticodon=(pos:48839..48841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00310;product=tRNA-Asn NZ_JAVRJS010000001.1 tRNAscan-SE exon 48807 48881 . + . ID=exon-RM672_RS00310-1;Parent=rna-RM672_RS00310;anticodon=(pos:48839..48841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00310;product=tRNA-Asn NZ_JAVRJS010000001.1 RefSeq gene 48883 48954 . + . ID=gene-RM672_RS00315;Name=RM672_RS00315;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00315;old_locus_tag=RM672_00315 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 48883 48954 . + . ID=rna-RM672_RS00315;Parent=gene-RM672_RS00315;anticodon=(pos:48916..48918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00315;product=tRNA-Glu NZ_JAVRJS010000001.1 tRNAscan-SE exon 48883 48954 . + . ID=exon-RM672_RS00315-1;Parent=rna-RM672_RS00315;anticodon=(pos:48916..48918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00315;product=tRNA-Glu NZ_JAVRJS010000001.1 RefSeq gene 49003 49091 . + . ID=gene-RM672_RS00320;Name=RM672_RS00320;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS00320;old_locus_tag=RM672_00320 NZ_JAVRJS010000001.1 tRNAscan-SE tRNA 49003 49091 . + . ID=rna-RM672_RS00320;Parent=gene-RM672_RS00320;anticodon=(pos:49038..49040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00320;product=tRNA-Ser NZ_JAVRJS010000001.1 tRNAscan-SE exon 49003 49091 . + . ID=exon-RM672_RS00320-1;Parent=rna-RM672_RS00320;anticodon=(pos:49038..49040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS00320;product=tRNA-Ser NZ_JAVRJS010000001.1 RefSeq gene 49144 50193 . - . ID=gene-RM672_RS00325;Name=RM672_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00325;old_locus_tag=RM672_00325 NZ_JAVRJS010000001.1 Protein Homology CDS 49144 50193 . - 0 ID=cds-WP_311541221.1;Parent=gene-RM672_RS00325;Dbxref=GenBank:WP_311541221.1;Name=WP_311541221.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456358.1;locus_tag=RM672_RS00325;product=site-specific integrase;protein_id=WP_311541221.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 50265 50879 . - . ID=gene-RM672_RS00330;Name=RM672_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00330;old_locus_tag=RM672_00330 NZ_JAVRJS010000001.1 Protein Homology CDS 50265 50879 . - 0 ID=cds-WP_311541222.1;Parent=gene-RM672_RS00330;Dbxref=GenBank:WP_311541222.1;Name=WP_311541222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829359.1;locus_tag=RM672_RS00330;product=DUF4352 domain-containing protein;protein_id=WP_311541222.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 50930 51388 . - . ID=gene-RM672_RS00335;Name=RM672_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00335;old_locus_tag=RM672_00335 NZ_JAVRJS010000001.1 Protein Homology CDS 50930 51388 . - 0 ID=cds-WP_311542402.1;Parent=gene-RM672_RS00335;Dbxref=GenBank:WP_311542402.1;Name=WP_311542402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219564.1;locus_tag=RM672_RS00335;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_311542402.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 51418 51732 . - . ID=gene-RM672_RS00340;Name=RM672_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00340;old_locus_tag=RM672_00340 NZ_JAVRJS010000001.1 Protein Homology CDS 51418 51732 . - 0 ID=cds-WP_311542403.1;Parent=gene-RM672_RS00340;Dbxref=GenBank:WP_311542403.1;Name=WP_311542403.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504199.1;locus_tag=RM672_RS00340;product=helix-turn-helix domain-containing protein;protein_id=WP_311542403.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 51886 52098 . + . ID=gene-RM672_RS00345;Name=RM672_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00345;old_locus_tag=RM672_00345 NZ_JAVRJS010000001.1 Protein Homology CDS 51886 52098 . + 0 ID=cds-WP_002456362.1;Parent=gene-RM672_RS00345;Dbxref=GenBank:WP_002456362.1;Name=WP_002456362.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132644.1;locus_tag=RM672_RS00345;product=helix-turn-helix transcriptional regulator;protein_id=WP_002456362.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 52138 53031 . + . ID=gene-RM672_RS00350;Name=RM672_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00350;old_locus_tag=RM672_00350 NZ_JAVRJS010000001.1 Protein Homology CDS 52138 53031 . + 0 ID=cds-WP_311542404.1;Parent=gene-RM672_RS00350;Dbxref=GenBank:WP_311542404.1;Name=WP_311542404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488918.1;locus_tag=RM672_RS00350;product=DUF3102 domain-containing protein;protein_id=WP_311542404.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 53034 53621 . + . ID=gene-RM672_RS00355;Name=RM672_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00355;old_locus_tag=RM672_00355 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 53034 53621 . + 0 ID=cds-WP_311541225.1;Parent=gene-RM672_RS00355;Dbxref=GenBank:WP_311541225.1;Name=WP_311541225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00355;product=hypothetical protein;protein_id=WP_311541225.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 53633 53854 . + . ID=gene-RM672_RS00360;Name=tscA;gbkey=Gene;gene=tscA;gene_biotype=protein_coding;locus_tag=RM672_RS00360;old_locus_tag=RM672_00360 NZ_JAVRJS010000001.1 Protein Homology CDS 53633 53854 . + 0 ID=cds-WP_060550711.1;Parent=gene-RM672_RS00360;Dbxref=GenBank:WP_060550711.1;Name=WP_060550711.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tscA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219725.1;locus_tag=RM672_RS00360;product=type II toxin-antitoxin system antitoxin TscA;protein_id=WP_060550711.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 54032 54235 . - . ID=gene-RM672_RS00365;Name=RM672_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00365;old_locus_tag=RM672_00365 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 54032 54235 . - 0 ID=cds-WP_311542405.1;Parent=gene-RM672_RS00365;Dbxref=GenBank:WP_311542405.1;Name=WP_311542405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00365;product=hypothetical protein;protein_id=WP_311542405.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 54387 54599 . + . ID=gene-RM672_RS00370;Name=RM672_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00370;old_locus_tag=RM672_00370 NZ_JAVRJS010000001.1 Protein Homology CDS 54387 54599 . + 0 ID=cds-WP_311542406.1;Parent=gene-RM672_RS00370;Dbxref=GenBank:WP_311542406.1;Name=WP_311542406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468742.1;locus_tag=RM672_RS00370;product=hypothetical protein;protein_id=WP_311542406.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 54593 54766 . + . ID=gene-RM672_RS00375;Name=RM672_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00375;old_locus_tag=RM672_00375 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 54593 54766 . + 0 ID=cds-WP_311542407.1;Parent=gene-RM672_RS00375;Dbxref=GenBank:WP_311542407.1;Name=WP_311542407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00375;product=hypothetical protein;protein_id=WP_311542407.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 54845 55111 . + . ID=gene-RM672_RS00380;Name=RM672_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00380;old_locus_tag=RM672_00380 NZ_JAVRJS010000001.1 Protein Homology CDS 54845 55111 . + 0 ID=cds-WP_311542408.1;Parent=gene-RM672_RS00380;Dbxref=GenBank:WP_311542408.1;Name=WP_311542408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018263.9;locus_tag=RM672_RS00380;product=DUF1108 family protein;protein_id=WP_311542408.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 55111 55647 . + . ID=gene-RM672_RS00385;Name=RM672_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00385;old_locus_tag=RM672_00385 NZ_JAVRJS010000001.1 Protein Homology CDS 55111 55647 . + 0 ID=cds-WP_167697123.1;Parent=gene-RM672_RS00385;Dbxref=GenBank:WP_167697123.1;Name=WP_167697123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168339.1;locus_tag=RM672_RS00385;product=host-nuclease inhibitor Gam family protein;protein_id=WP_167697123.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 55648 56415 . + . ID=gene-RM672_RS00390;Name=RM672_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00390;old_locus_tag=RM672_00390 NZ_JAVRJS010000001.1 Protein Homology CDS 55648 56415 . + 0 ID=cds-WP_311542409.1;Parent=gene-RM672_RS00390;Dbxref=GenBank:WP_311542409.1;Name=WP_311542409.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642650.1;locus_tag=RM672_RS00390;product=ATP-binding protein;protein_id=WP_311542409.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 56443 56985 . + . ID=gene-RM672_RS00395;Name=RM672_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00395;old_locus_tag=RM672_00395 NZ_JAVRJS010000001.1 Protein Homology CDS 56443 56985 . + 0 ID=cds-WP_233650200.1;Parent=gene-RM672_RS00395;Dbxref=GenBank:WP_233650200.1;Name=WP_233650200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808003.1;locus_tag=RM672_RS00395;product=DUF669 domain-containing protein;protein_id=WP_233650200.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 56997 57668 . + . ID=gene-RM672_RS00400;Name=RM672_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00400;old_locus_tag=RM672_00400 NZ_JAVRJS010000001.1 Protein Homology CDS 56997 57668 . + 0 ID=cds-WP_311542410.1;Parent=gene-RM672_RS00400;Dbxref=GenBank:WP_311542410.1;Name=WP_311542410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165858.1;locus_tag=RM672_RS00400;product=putative HNHc nuclease;protein_id=WP_311542410.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 57669 58394 . + . ID=gene-RM672_RS00405;Name=RM672_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00405;old_locus_tag=RM672_00405 NZ_JAVRJS010000001.1 Protein Homology CDS 57669 58394 . + 0 ID=cds-WP_311542411.1;Parent=gene-RM672_RS00405;Dbxref=GenBank:WP_311542411.1;Name=WP_311542411.1;Ontology_term=GO:0006269;gbkey=CDS;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998680.1;locus_tag=RM672_RS00405;product=DnaD domain protein;protein_id=WP_311542411.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 58400 58744 . + . ID=gene-RM672_RS00410;Name=RM672_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00410;old_locus_tag=RM672_00410 NZ_JAVRJS010000001.1 Protein Homology CDS 58400 58744 . + 0 ID=cds-WP_511567713.1;Parent=gene-RM672_RS00410;Dbxref=GenBank:WP_511567713.1;Name=WP_511567713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022858.8;locus_tag=RM672_RS00410;product=replicative helicase loader/inhibitor;protein_id=WP_511567713.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 58731 59978 . + . ID=gene-RM672_RS00415;Name=RM672_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00415;old_locus_tag=RM672_00415 NZ_JAVRJS010000001.1 Protein Homology CDS 58731 59978 . + 0 ID=cds-WP_311542413.1;Parent=gene-RM672_RS00415;Dbxref=GenBank:WP_311542413.1;Name=WP_311542413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175692.1;locus_tag=RM672_RS00415;product=DnaB helicase C-terminal domain-containing protein;protein_id=WP_311542413.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 59978 60196 . + . ID=gene-RM672_RS00420;Name=RM672_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00420;old_locus_tag=RM672_00420 NZ_JAVRJS010000001.1 Protein Homology CDS 59978 60196 . + 0 ID=cds-WP_107375726.1;Parent=gene-RM672_RS00420;Dbxref=GenBank:WP_107375726.1;Name=WP_107375726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978221.1;locus_tag=RM672_RS00420;product=hypothetical protein;protein_id=WP_107375726.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 60183 60605 . + . ID=gene-RM672_RS00425;Name=RM672_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00425;old_locus_tag=RM672_00425 NZ_JAVRJS010000001.1 Protein Homology CDS 60183 60605 . + 0 ID=cds-WP_311542414.1;Parent=gene-RM672_RS00425;Dbxref=GenBank:WP_311542414.1;Name=WP_311542414.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166768.1;locus_tag=RM672_RS00425;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_311542414.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 60607 60816 . + . ID=gene-RM672_RS00430;Name=RM672_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00430;old_locus_tag=RM672_00430 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 60607 60816 . + 0 ID=cds-WP_311542415.1;Parent=gene-RM672_RS00430;Dbxref=GenBank:WP_311542415.1;Name=WP_311542415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00430;product=hypothetical protein;protein_id=WP_311542415.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 61026 61436 . + . ID=gene-RM672_RS00435;Name=RM672_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00435;old_locus_tag=RM672_00435 NZ_JAVRJS010000001.1 Protein Homology CDS 61026 61436 . + 0 ID=cds-WP_103158824.1;Parent=gene-RM672_RS00435;Dbxref=GenBank:WP_103158824.1;Name=WP_103158824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167846.1;locus_tag=RM672_RS00435;product=DUF3310 domain-containing protein;protein_id=WP_103158824.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 61433 61927 . + . ID=gene-RM672_RS00440;Name=RM672_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00440;old_locus_tag=RM672_00440 NZ_JAVRJS010000001.1 Protein Homology CDS 61433 61927 . + 0 ID=cds-WP_311542416.1;Parent=gene-RM672_RS00440;Dbxref=GenBank:WP_311542416.1;Name=WP_311542416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899742.1;locus_tag=RM672_RS00440;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_311542416.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 61920 62132 . + . ID=gene-RM672_RS00445;Name=RM672_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00445;old_locus_tag=RM672_00445 NZ_JAVRJS010000001.1 Protein Homology CDS 61920 62132 . + 0 ID=cds-WP_311542417.1;Parent=gene-RM672_RS00445;Dbxref=GenBank:WP_311542417.1;Name=WP_311542417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023102.7;locus_tag=RM672_RS00445;product=DUF3269 family protein;protein_id=WP_311542417.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 62143 63492 . + . ID=gene-RM672_RS00450;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=RM672_RS00450;old_locus_tag=RM672_00450 NZ_JAVRJS010000001.1 Protein Homology CDS 62143 63492 . + 0 ID=cds-WP_311542418.1;Parent=gene-RM672_RS00450;Dbxref=GenBank:WP_311542418.1;Name=WP_311542418.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898300.1;locus_tag=RM672_RS00450;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_311542418.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 63489 63695 . + . ID=gene-RM672_RS00455;Name=RM672_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00455;old_locus_tag=RM672_00455 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 63489 63695 . + 0 ID=cds-WP_311542419.1;Parent=gene-RM672_RS00455;Dbxref=GenBank:WP_311542419.1;Name=WP_311542419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00455;product=hypothetical protein;protein_id=WP_311542419.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 63682 64041 . + . ID=gene-RM672_RS00460;Name=RM672_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00460;old_locus_tag=RM672_00460 NZ_JAVRJS010000001.1 Protein Homology CDS 63682 64041 . + 0 ID=cds-WP_311542421.1;Parent=gene-RM672_RS00460;Dbxref=GenBank:WP_311542421.1;Name=WP_311542421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365145.1;locus_tag=RM672_RS00460;product=thermonuclease family protein;protein_id=WP_311542421.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 64042 64215 . + . ID=gene-RM672_RS00465;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=RM672_RS00465;old_locus_tag=RM672_00465 NZ_JAVRJS010000001.1 Protein Homology CDS 64042 64215 . + 0 ID=cds-WP_311542422.1;Parent=gene-RM672_RS00465;Dbxref=GenBank:WP_311542422.1;Name=WP_311542422.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028424.1;locus_tag=RM672_RS00465;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_311542422.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 64216 64722 . + . ID=gene-RM672_RS00470;Name=RM672_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00470;old_locus_tag=RM672_00470 NZ_JAVRJS010000001.1 Protein Homology CDS 64216 64722 . + 0 ID=cds-WP_311542423.1;Parent=gene-RM672_RS00470;Dbxref=GenBank:WP_311542423.1;Name=WP_311542423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061834.1;locus_tag=RM672_RS00470;product=dUTP diphosphatase;protein_id=WP_311542423.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 64868 65098 . + . ID=gene-RM672_RS00475;Name=RM672_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00475;old_locus_tag=RM672_00475 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 64868 65098 . + 0 ID=cds-WP_311542424.1;Parent=gene-RM672_RS00475;Dbxref=GenBank:WP_311542424.1;Name=WP_311542424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00475;product=hypothetical protein;protein_id=WP_311542424.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 65100 65258 . + . ID=gene-RM672_RS11505;Name=RM672_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11505 NZ_JAVRJS010000001.1 Protein Homology CDS 65100 65258 . + 0 ID=cds-WP_511567712.1;Parent=gene-RM672_RS11505;Dbxref=GenBank:WP_511567712.1;Name=WP_511567712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019082.9;locus_tag=RM672_RS11505;product=DUF1514 family protein;protein_id=WP_511567712.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 65269 65592 . + . ID=gene-RM672_RS00480;Name=RM672_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00480;old_locus_tag=RM672_00480 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 65269 65592 . + 0 ID=cds-WP_311542425.1;Parent=gene-RM672_RS00480;Dbxref=GenBank:WP_311542425.1;Name=WP_311542425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00480;product=hypothetical protein;protein_id=WP_311542425.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 65622 65789 . + . ID=gene-RM672_RS00485;Name=RM672_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00485;old_locus_tag=RM672_00485 NZ_JAVRJS010000001.1 Protein Homology CDS 65622 65789 . + 0 ID=cds-WP_107367336.1;Parent=gene-RM672_RS00485;Dbxref=GenBank:WP_107367336.1;Name=WP_107367336.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085713.1;locus_tag=RM672_RS00485;product=helix-turn-helix domain-containing protein;protein_id=WP_107367336.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 65826 66224 . + . ID=gene-RM672_RS00490;Name=RM672_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00490;old_locus_tag=RM672_00490 NZ_JAVRJS010000001.1 Protein Homology CDS 65826 66224 . + 0 ID=cds-WP_311542426.1;Parent=gene-RM672_RS00490;Dbxref=GenBank:WP_311542426.1;Name=WP_311542426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175415.1;locus_tag=RM672_RS00490;product=hypothetical protein;protein_id=WP_311542426.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 66409 66732 . + . ID=gene-RM672_RS00495;Name=RM672_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00495;old_locus_tag=RM672_00495 NZ_JAVRJS010000001.1 Protein Homology CDS 66409 66732 . + 0 ID=cds-WP_375712625.1;Parent=gene-RM672_RS00495;Dbxref=GenBank:WP_375712625.1;Name=WP_375712625.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978003.1;locus_tag=RM672_RS00495;product=HNH endonuclease;protein_id=WP_375712625.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 66880 67227 . + . ID=gene-RM672_RS00500;Name=RM672_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00500;old_locus_tag=RM672_00500 NZ_JAVRJS010000001.1 Protein Homology CDS 66880 67227 . + 0 ID=cds-WP_119523779.1;Parent=gene-RM672_RS00500;Dbxref=GenBank:WP_119523779.1;Name=WP_119523779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978008.1;locus_tag=RM672_RS00500;product=P27 family phage terminase small subunit;protein_id=WP_119523779.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 67224 68885 . + . ID=gene-RM672_RS00505;Name=RM672_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00505;old_locus_tag=RM672_00505 NZ_JAVRJS010000001.1 Protein Homology CDS 67224 68885 . + 0 ID=cds-WP_311542427.1;Parent=gene-RM672_RS00505;Dbxref=GenBank:WP_311542427.1;Name=WP_311542427.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636899.1;locus_tag=RM672_RS00505;product=terminase TerL endonuclease subunit;protein_id=WP_311542427.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 68904 70076 . + . ID=gene-RM672_RS00510;Name=RM672_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00510;old_locus_tag=RM672_00510 NZ_JAVRJS010000001.1 Protein Homology CDS 68904 70076 . + 0 ID=cds-WP_375712628.1;Parent=gene-RM672_RS00510;Dbxref=GenBank:WP_375712628.1;Name=WP_375712628.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442346.1;locus_tag=RM672_RS00510;product=phage portal protein;protein_id=WP_375712628.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 70051 70851 . + . ID=gene-RM672_RS00515;Name=RM672_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00515;old_locus_tag=RM672_00515 NZ_JAVRJS010000001.1 Protein Homology CDS 70051 70851 . + 0 ID=cds-WP_311542429.1;Parent=gene-RM672_RS00515;Dbxref=GenBank:WP_311542429.1;Name=WP_311542429.1;Ontology_term=GO:0046797,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=viral procapsid maturation|0046797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175420.1;locus_tag=RM672_RS00515;product=head maturation protease%2C ClpP-related;protein_id=WP_311542429.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 70908 72071 . + . ID=gene-RM672_RS00520;Name=RM672_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00520;old_locus_tag=RM672_00520 NZ_JAVRJS010000001.1 Protein Homology CDS 70908 72071 . + 0 ID=cds-WP_311542430.1;Parent=gene-RM672_RS00520;Dbxref=GenBank:WP_311542430.1;Name=WP_311542430.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636897.1;locus_tag=RM672_RS00520;product=phage major capsid protein;protein_id=WP_311542430.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 72086 72382 . + . ID=gene-RM672_RS00525;Name=RM672_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00525;old_locus_tag=RM672_00525 NZ_JAVRJS010000001.1 Protein Homology CDS 72086 72382 . + 0 ID=cds-WP_311542431.1;Parent=gene-RM672_RS00525;Dbxref=GenBank:WP_311542431.1;Name=WP_311542431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636896.1;locus_tag=RM672_RS00525;product=phage head-tail adapter protein;protein_id=WP_311542431.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 72366 72731 . + . ID=gene-RM672_RS00530;Name=RM672_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00530;old_locus_tag=RM672_00530 NZ_JAVRJS010000001.1 Protein Homology CDS 72366 72731 . + 0 ID=cds-WP_311542432.1;Parent=gene-RM672_RS00530;Dbxref=GenBank:WP_311542432.1;Name=WP_311542432.1;Ontology_term=GO:0098005,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral head-tail joining|0098005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636895.1;locus_tag=RM672_RS00530;product=head-tail adaptor protein;protein_id=WP_311542432.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 72728 73150 . + . ID=gene-RM672_RS00535;Name=RM672_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00535;old_locus_tag=RM672_00535 NZ_JAVRJS010000001.1 Protein Homology CDS 72728 73150 . + 0 ID=cds-WP_311542433.1;Parent=gene-RM672_RS00535;Dbxref=GenBank:WP_311542433.1;Name=WP_311542433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636894.1;locus_tag=RM672_RS00535;product=hypothetical protein;protein_id=WP_311542433.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 73147 73554 . + . ID=gene-RM672_RS00540;Name=RM672_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00540;old_locus_tag=RM672_00540 NZ_JAVRJS010000001.1 Protein Homology CDS 73147 73554 . + 0 ID=cds-WP_107375743.1;Parent=gene-RM672_RS00540;Dbxref=GenBank:WP_107375743.1;Name=WP_107375743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978002.1;locus_tag=RM672_RS00540;product=hypothetical protein;protein_id=WP_107375743.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 73575 74177 . + . ID=gene-RM672_RS00545;Name=RM672_RS00545;end_range=74177,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS00545;old_locus_tag=RM672_00545;partial=true;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 73575 74177 . + 0 ID=cds-RM672_RS00545;Parent=gene-RM672_RS00545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198;end_range=74177,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268736.1;locus_tag=RM672_RS00545;partial=true;product=major tail protein;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 74193 74438 . + . ID=gene-RM672_RS00550;Name=RM672_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00550;old_locus_tag=RM672_00550 NZ_JAVRJS010000001.1 Protein Homology CDS 74193 74438 . + 0 ID=cds-WP_311542460.1;Parent=gene-RM672_RS00550;Dbxref=GenBank:WP_311542460.1;Name=WP_311542460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.7;locus_tag=RM672_RS00550;product=Ig-like domain-containing protein;protein_id=WP_311542460.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 74511 74675 . + . ID=gene-RM672_RS00555;Name=RM672_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00555;old_locus_tag=RM672_00555 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 74511 74675 . + 0 ID=cds-WP_198644509.1;Parent=gene-RM672_RS00555;Dbxref=GenBank:WP_198644509.1;Name=WP_198644509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00555;product=hypothetical protein;protein_id=WP_198644509.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 74690 75049 . + . ID=gene-RM672_RS00560;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=RM672_RS00560;old_locus_tag=RM672_00560 NZ_JAVRJS010000001.1 Protein Homology CDS 74690 75049 . + 0 ID=cds-WP_182472259.1;Parent=gene-RM672_RS00560;Dbxref=GenBank:WP_182472259.1;Name=WP_182472259.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636890.1;locus_tag=RM672_RS00560;product=phage tail assembly chaperone G;protein_id=WP_182472259.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 75121 75252 . + . ID=gene-RM672_RS11385;Name=gpGT;gbkey=Gene;gene=gpGT;gene_biotype=protein_coding;locus_tag=RM672_RS11385 NZ_JAVRJS010000001.1 Protein Homology CDS 75121 75252 . + 0 ID=cds-WP_375712629.1;Parent=gene-RM672_RS11385;Dbxref=GenBank:WP_375712629.1;Name=WP_375712629.1;gbkey=CDS;gene=gpGT;inference=COORDINATES: protein motif:HMM:NF047426.1;locus_tag=RM672_RS11385;product=phage tail assembly chaperone GT;protein_id=WP_375712629.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 75312 81059 . + . ID=gene-RM672_RS00565;Name=RM672_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00565;old_locus_tag=RM672_00565 NZ_JAVRJS010000001.1 Protein Homology CDS 75312 81059 . + 0 ID=cds-WP_311542434.1;Parent=gene-RM672_RS00565;Dbxref=GenBank:WP_311542434.1;Name=WP_311542434.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469759.1;locus_tag=RM672_RS00565;product=phage tail tape measure protein;protein_id=WP_311542434.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 81063 81896 . + . ID=gene-RM672_RS00570;Name=RM672_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00570;old_locus_tag=RM672_00570 NZ_JAVRJS010000001.1 Protein Homology CDS 81063 81896 . + 0 ID=cds-WP_311542435.1;Parent=gene-RM672_RS00570;Dbxref=GenBank:WP_311542435.1;Name=WP_311542435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276038.1;locus_tag=RM672_RS00570;product=phage tail domain-containing protein;protein_id=WP_311542435.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 81911 84172 . + . ID=gene-RM672_RS00575;Name=RM672_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00575;old_locus_tag=RM672_00575 NZ_JAVRJS010000001.1 Protein Homology CDS 81911 84172 . + 0 ID=cds-WP_311542437.1;Parent=gene-RM672_RS00575;Dbxref=GenBank:WP_311542437.1;Name=WP_311542437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276617.1;locus_tag=RM672_RS00575;product=SGNH/GDSL hydrolase family protein;protein_id=WP_311542437.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 84207 86204 . + . ID=gene-RM672_RS00580;Name=RM672_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00580;old_locus_tag=RM672_00580 NZ_JAVRJS010000001.1 Protein Homology CDS 84207 86204 . + 0 ID=cds-WP_311542438.1;Parent=gene-RM672_RS00580;Dbxref=GenBank:WP_311542438.1;Name=WP_311542438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482965.1;locus_tag=RM672_RS00580;product=phage tail protein;protein_id=WP_311542438.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 86214 86462 . + . ID=gene-RM672_RS00585;Name=RM672_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00585;old_locus_tag=RM672_00585 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 86214 86462 . + 0 ID=cds-WP_311542439.1;Parent=gene-RM672_RS00585;Dbxref=GenBank:WP_311542439.1;Name=WP_311542439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00585;product=hypothetical protein;protein_id=WP_311542439.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 86443 86598 . + . ID=gene-RM672_RS00590;Name=RM672_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00590;old_locus_tag=RM672_00590 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 86443 86598 . + 0 ID=cds-WP_311542440.1;Parent=gene-RM672_RS00590;Dbxref=GenBank:WP_311542440.1;Name=WP_311542440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00590;product=hypothetical protein;protein_id=WP_311542440.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 86664 87086 . + . ID=gene-RM672_RS00595;Name=RM672_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00595;old_locus_tag=RM672_00595 NZ_JAVRJS010000001.1 Protein Homology CDS 86664 87086 . + 0 ID=cds-WP_311542441.1;Parent=gene-RM672_RS00595;Dbxref=GenBank:WP_311542441.1;Name=WP_311542441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470002.1;locus_tag=RM672_RS00595;product=hypothetical protein;protein_id=WP_311542441.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 87070 87465 . + . ID=gene-RM672_RS00600;Name=RM672_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00600;old_locus_tag=RM672_00600 NZ_JAVRJS010000001.1 Protein Homology CDS 87070 87465 . + 0 ID=cds-WP_311542442.1;Parent=gene-RM672_RS00600;Dbxref=GenBank:WP_311542442.1;Name=WP_311542442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219677.1;locus_tag=RM672_RS00600;product=hypothetical protein;protein_id=WP_311542442.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 87477 87764 . + . ID=gene-RM672_RS00605;Name=RM672_RS00605;end_range=87764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS00605;old_locus_tag=RM672_00605;partial=true;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 87477 87764 . + 0 ID=cds-RM672_RS00605;Parent=gene-RM672_RS00605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0140911;end_range=87764,.;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500517.1;locus_tag=RM672_RS00605;partial=true;product=phage holin;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 87940 89328 . + . ID=gene-RM672_RS00610;Name=RM672_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00610;old_locus_tag=RM672_00610 NZ_JAVRJS010000001.1 Protein Homology CDS 87940 89328 . + 0 ID=cds-WP_182465444.1;Parent=gene-RM672_RS00610;Dbxref=GenBank:WP_182465444.1;Name=WP_182465444.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013670.7;locus_tag=RM672_RS00610;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_182465444.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 89389 89625 . + . ID=gene-RM672_RS00615;Name=RM672_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00615;old_locus_tag=RM672_00615 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 89389 89625 . + 0 ID=cds-WP_311542443.1;Parent=gene-RM672_RS00615;Dbxref=GenBank:WP_311542443.1;Name=WP_311542443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00615;product=hypothetical protein;protein_id=WP_311542443.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 89666 90016 . - . ID=gene-RM672_RS00620;Name=RM672_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00620;old_locus_tag=RM672_00620 NZ_JAVRJS010000001.1 Protein Homology CDS 89666 90016 . - 0 ID=cds-WP_311540194.1;Parent=gene-RM672_RS00620;Dbxref=GenBank:WP_311540194.1;Name=WP_311540194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729174.1;locus_tag=RM672_RS00620;product=hypothetical protein;protein_id=WP_311540194.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 89994 90191 . - . ID=gene-RM672_RS11390;Name=RM672_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11390 NZ_JAVRJS010000001.1 Protein Homology CDS 89994 90191 . - 0 ID=cds-WP_375712626.1;Parent=gene-RM672_RS11390;Dbxref=GenBank:WP_375712626.1;Name=WP_375712626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019493.7;locus_tag=RM672_RS11390;product=ribbon-helix-helix domain-containing protein;protein_id=WP_375712626.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 90292 90801 . + . ID=gene-RM672_RS00625;Name=RM672_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00625;old_locus_tag=RM672_00625 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 90292 90801 . + 0 ID=cds-WP_311542444.1;Parent=gene-RM672_RS00625;Dbxref=GenBank:WP_311542444.1;Name=WP_311542444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00625;product=hypothetical protein;protein_id=WP_311542444.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 91312 91545 . + . ID=gene-RM672_RS00630;Name=RM672_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00630;old_locus_tag=RM672_00630 NZ_JAVRJS010000001.1 Protein Homology CDS 91312 91545 . + 0 ID=cds-WP_241956345.1;Parent=gene-RM672_RS00630;Dbxref=GenBank:WP_241956345.1;Name=WP_241956345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=RM672_RS00630;product=hypothetical protein;protein_id=WP_241956345.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 91772 92505 . + . ID=gene-RM672_RS00635;Name=RM672_RS00635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS00635;old_locus_tag=RM672_00635;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 91772 92505 . + 0 ID=cds-RM672_RS00635;Parent=gene-RM672_RS00635;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490110.1;locus_tag=RM672_RS00635;product=halocin C8 precursor-like protein;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 92684 93067 . + . ID=gene-RM672_RS00640;Name=RM672_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00640;old_locus_tag=RM672_00640 NZ_JAVRJS010000001.1 Protein Homology CDS 92684 93067 . + 0 ID=cds-WP_182474549.1;Parent=gene-RM672_RS00640;Dbxref=GenBank:WP_182474549.1;Name=WP_182474549.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF056917.1;locus_tag=RM672_RS00640;product=YqxI family protein;protein_id=WP_182474549.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 93166 93309 . + . ID=gene-RM672_RS00645;Name=RM672_RS00645;end_range=93309,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS00645;old_locus_tag=RM672_00645;partial=true;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 93166 93309 . + 0 ID=cds-RM672_RS00645;Parent=gene-RM672_RS00645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=93309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501230.1;locus_tag=RM672_RS00645;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 94213 95067 . + . ID=gene-RM672_RS00650;Name=RM672_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00650;old_locus_tag=RM672_00650 NZ_JAVRJS010000001.1 Protein Homology CDS 94213 95067 . + 0 ID=cds-WP_107398751.1;Parent=gene-RM672_RS00650;Dbxref=GenBank:WP_107398751.1;Name=WP_107398751.1;Ontology_term=GO:0008233,GO:0070007;gbkey=CDS;go_function=peptidase activity|0008233||IEA,glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF024760.7;locus_tag=RM672_RS00650;product=PrsW family glutamic-type intramembrane protease;protein_id=WP_107398751.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 95580 96326 . - . ID=gene-RM672_RS00655;Name=RM672_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00655;old_locus_tag=RM672_00655 NZ_JAVRJS010000001.1 Protein Homology CDS 95580 96326 . - 0 ID=cds-WP_037574536.1;Parent=gene-RM672_RS00655;Dbxref=GenBank:WP_037574536.1;Name=WP_037574536.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006677782.1;locus_tag=RM672_RS00655;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_037574536.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 96647 97192 . + . ID=gene-RM672_RS00660;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=RM672_RS00660;old_locus_tag=RM672_00660 NZ_JAVRJS010000001.1 Protein Homology CDS 96647 97192 . + 0 ID=cds-WP_037574533.1;Parent=gene-RM672_RS00660;Dbxref=GenBank:WP_037574533.1;Name=WP_037574533.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=RM672_RS00660;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_037574533.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 97213 97455 . + . ID=gene-RM672_RS00665;Name=RM672_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00665;old_locus_tag=RM672_00665 NZ_JAVRJS010000001.1 Protein Homology CDS 97213 97455 . + 0 ID=cds-WP_037574531.1;Parent=gene-RM672_RS00665;Dbxref=GenBank:WP_037574531.1;Name=WP_037574531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432747.1;locus_tag=RM672_RS00665;product=DUF2273 domain-containing protein;protein_id=WP_037574531.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 97503 97997 . + . ID=gene-RM672_RS00670;Name=RM672_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00670;old_locus_tag=RM672_00670 NZ_JAVRJS010000001.1 Protein Homology CDS 97503 97997 . + 0 ID=cds-WP_037574529.1;Parent=gene-RM672_RS00670;Dbxref=GenBank:WP_037574529.1;Name=WP_037574529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=RM672_RS00670;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037574529.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 98253 99662 . + . ID=gene-RM672_RS00675;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=RM672_RS00675;old_locus_tag=RM672_00675 NZ_JAVRJS010000001.1 Protein Homology CDS 98253 99662 . + 0 ID=cds-WP_136731913.1;Parent=gene-RM672_RS00675;Dbxref=GenBank:WP_136731913.1;Name=WP_136731913.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464482.1;locus_tag=RM672_RS00675;product=o-succinylbenzoate--CoA ligase;protein_id=WP_136731913.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 99659 100648 . + . ID=gene-RM672_RS00680;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=RM672_RS00680;old_locus_tag=RM672_00680 NZ_JAVRJS010000001.1 Protein Homology CDS 99659 100648 . + 0 ID=cds-WP_105962883.1;Parent=gene-RM672_RS00680;Dbxref=GenBank:WP_105962883.1;Name=WP_105962883.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=RM672_RS00680;product=o-succinylbenzoate synthase;protein_id=WP_105962883.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 100645 100875 . - . ID=gene-RM672_RS00685;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=RM672_RS00685;old_locus_tag=RM672_00685 NZ_JAVRJS010000001.1 Protein Homology CDS 100645 100875 . - 0 ID=cds-WP_037574520.1;Parent=gene-RM672_RS00685;Dbxref=GenBank:WP_037574520.1;Name=WP_037574520.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=RM672_RS00685;product=membrane protein insertion efficiency factor YidD;protein_id=WP_037574520.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 100938 101402 . + . ID=gene-RM672_RS00690;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=RM672_RS00690;old_locus_tag=RM672_00690 NZ_JAVRJS010000001.1 Protein Homology CDS 100938 101402 . + 0 ID=cds-WP_311539756.1;Parent=gene-RM672_RS00690;Dbxref=GenBank:WP_311539756.1;Name=WP_311539756.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672014.1;locus_tag=RM672_RS00690;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_311539756.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 101389 102174 . + . ID=gene-RM672_RS00695;Name=RM672_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00695;old_locus_tag=RM672_00695 NZ_JAVRJS010000001.1 Protein Homology CDS 101389 102174 . + 0 ID=cds-WP_172458435.1;Parent=gene-RM672_RS00695;Dbxref=GenBank:WP_172458435.1;Name=WP_172458435.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452127.1;locus_tag=RM672_RS00695;product=alpha/beta hydrolase family protein;protein_id=WP_172458435.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 102210 103790 . - . ID=gene-RM672_RS00700;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=RM672_RS00700;old_locus_tag=RM672_00700 NZ_JAVRJS010000001.1 Protein Homology CDS 102210 103790 . - 0 ID=cds-WP_037574513.1;Parent=gene-RM672_RS00700;Dbxref=GenBank:WP_037574513.1;Name=WP_037574513.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=RM672_RS00700;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_037574513.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch riboswitch 104004 104114 . + . ID=id-NZ_JAVRJS010000001.1:104004..104114;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000001.1 RefSeq gene 104223 105422 . + . ID=gene-RM672_RS00705;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=RM672_RS00705;old_locus_tag=RM672_00705 NZ_JAVRJS010000001.1 Protein Homology CDS 104223 105422 . + 0 ID=cds-WP_107359808.1;Parent=gene-RM672_RS00705;Dbxref=GenBank:WP_107359808.1;Name=WP_107359808.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=RM672_RS00705;product=methionine adenosyltransferase;protein_id=WP_107359808.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 105512 106420 . + . ID=gene-RM672_RS00710;Name=RM672_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00710;old_locus_tag=RM672_00710 NZ_JAVRJS010000001.1 Protein Homology CDS 105512 106420 . + 0 ID=cds-WP_037574509.1;Parent=gene-RM672_RS00710;Dbxref=GenBank:WP_037574509.1;Name=WP_037574509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452130.1;locus_tag=RM672_RS00710;product=NERD domain-containing protein;protein_id=WP_037574509.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 106670 107506 . + . ID=gene-RM672_RS00715;Name=RM672_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00715;old_locus_tag=RM672_00715 NZ_JAVRJS010000001.1 Protein Homology CDS 106670 107506 . + 0 ID=cds-WP_103158792.1;Parent=gene-RM672_RS00715;Dbxref=GenBank:WP_103158792.1;Name=WP_103158792.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=RM672_RS00715;product=aldo/keto reductase;protein_id=WP_103158792.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 107638 108012 . - . ID=gene-RM672_RS00720;Name=RM672_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00720;old_locus_tag=RM672_00720 NZ_JAVRJS010000001.1 Protein Homology CDS 107638 108012 . - 0 ID=cds-WP_311539755.1;Parent=gene-RM672_RS00720;Dbxref=GenBank:WP_311539755.1;Name=WP_311539755.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014584.7;locus_tag=RM672_RS00720;product=fluoride efflux transporter FluC;protein_id=WP_311539755.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 108009 108374 . - . ID=gene-RM672_RS00725;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=RM672_RS00725;old_locus_tag=RM672_00725 NZ_JAVRJS010000001.1 Protein Homology CDS 108009 108374 . - 0 ID=cds-WP_037574504.1;Parent=gene-RM672_RS00725;Dbxref=GenBank:WP_037574504.1;Name=WP_037574504.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507277.1;locus_tag=RM672_RS00725;product=fluoride efflux transporter CrcB;protein_id=WP_037574504.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 108392 108694 . - . ID=gene-RM672_RS00730;Name=RM672_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00730;old_locus_tag=RM672_00730 NZ_JAVRJS010000001.1 Protein Homology CDS 108392 108694 . - 0 ID=cds-WP_037574501.1;Parent=gene-RM672_RS00730;Dbxref=GenBank:WP_037574501.1;Name=WP_037574501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=RM672_RS00730;product=hypothetical protein;protein_id=WP_037574501.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 108844 109554 . + . ID=gene-RM672_RS00735;Name=RM672_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00735;old_locus_tag=RM672_00735 NZ_JAVRJS010000001.1 Protein Homology CDS 108844 109554 . + 0 ID=cds-WP_037574499.1;Parent=gene-RM672_RS00735;Dbxref=GenBank:WP_037574499.1;Name=WP_037574499.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=RM672_RS00735;product=transaldolase;protein_id=WP_037574499.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 109655 110107 . + . ID=gene-RM672_RS00740;Name=RM672_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00740;old_locus_tag=RM672_00740 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 109655 110107 . + 0 ID=cds-WP_037574497.1;Parent=gene-RM672_RS00740;Dbxref=GenBank:WP_037574497.1;Name=WP_037574497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00740;product=hypothetical protein;protein_id=WP_037574497.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 110087 110515 . - . ID=gene-RM672_RS00745;Name=RM672_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00745;old_locus_tag=RM672_00745 NZ_JAVRJS010000001.1 Protein Homology CDS 110087 110515 . - 0 ID=cds-WP_037574495.1;Parent=gene-RM672_RS00745;Dbxref=GenBank:WP_037574495.1;Name=WP_037574495.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF018087.7;locus_tag=RM672_RS00745;product=competence protein ComK;protein_id=WP_037574495.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 110533 111000 . - . ID=gene-RM672_RS00750;Name=RM672_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00750;old_locus_tag=RM672_00750 NZ_JAVRJS010000001.1 Protein Homology CDS 110533 111000 . - 0 ID=cds-WP_103158790.1;Parent=gene-RM672_RS00750;Dbxref=GenBank:WP_103158790.1;Name=WP_103158790.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=RM672_RS00750;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_103158790.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 111196 111420 . + . ID=gene-RM672_RS00755;Name=RM672_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00755;old_locus_tag=RM672_00755 NZ_JAVRJS010000001.1 Protein Homology CDS 111196 111420 . + 0 ID=cds-WP_037574491.1;Parent=gene-RM672_RS00755;Dbxref=GenBank:WP_037574491.1;Name=WP_037574491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468074.1;locus_tag=RM672_RS00755;product=hypothetical protein;protein_id=WP_037574491.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 111583 112449 . + . ID=gene-RM672_RS00760;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=RM672_RS00760;old_locus_tag=RM672_00760 NZ_JAVRJS010000001.1 Protein Homology CDS 111583 112449 . + 0 ID=cds-WP_037574490.1;Parent=gene-RM672_RS00760;Dbxref=GenBank:WP_037574490.1;Name=WP_037574490.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=RM672_RS00760;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_037574490.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 112981 114624 . + . ID=gene-RM672_RS00765;Name=RM672_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00765;old_locus_tag=RM672_00765 NZ_JAVRJS010000001.1 Protein Homology CDS 112981 114624 . + 0 ID=cds-WP_233654859.1;Parent=gene-RM672_RS00765;Dbxref=GenBank:WP_233654859.1;Name=WP_233654859.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381997.1;locus_tag=RM672_RS00765;product=FAD/NAD(P)-binding protein;protein_id=WP_233654859.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch riboswitch 114739 114868 . + . ID=id-NZ_JAVRJS010000001.1:114739..114868;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000001.1 RefSeq gene 115014 116060 . + . ID=gene-RM672_RS00770;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=RM672_RS00770;old_locus_tag=RM672_00770 NZ_JAVRJS010000001.1 Protein Homology CDS 115014 116060 . + 0 ID=cds-WP_311541257.1;Parent=gene-RM672_RS00770;Dbxref=GenBank:WP_311541257.1;Name=WP_311541257.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474980.1;locus_tag=RM672_RS00770;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_311541257.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 116065 116694 . + . ID=gene-RM672_RS00775;Name=RM672_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00775;old_locus_tag=RM672_00775 NZ_JAVRJS010000001.1 Protein Homology CDS 116065 116694 . + 0 ID=cds-WP_037574483.1;Parent=gene-RM672_RS00775;Dbxref=GenBank:WP_037574483.1;Name=WP_037574483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=RM672_RS00775;product=riboflavin synthase;protein_id=WP_037574483.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 116708 117889 . + . ID=gene-RM672_RS00780;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=RM672_RS00780;old_locus_tag=RM672_00780 NZ_JAVRJS010000001.1 Protein Homology CDS 116708 117889 . + 0 ID=cds-WP_311539753.1;Parent=gene-RM672_RS00780;Dbxref=GenBank:WP_311539753.1;Name=WP_311539753.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=RM672_RS00780;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_311539753.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 117907 118365 . + . ID=gene-RM672_RS00785;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=RM672_RS00785;old_locus_tag=RM672_00785 NZ_JAVRJS010000001.1 Protein Homology CDS 117907 118365 . + 0 ID=cds-WP_037574478.1;Parent=gene-RM672_RS00785;Dbxref=GenBank:WP_037574478.1;Name=WP_037574478.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425392.1;locus_tag=RM672_RS00785;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_037574478.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 118575 119621 . - . ID=gene-RM672_RS00790;Name=RM672_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00790;old_locus_tag=RM672_00790 NZ_JAVRJS010000001.1 Protein Homology CDS 118575 119621 . - 0 ID=cds-WP_084276030.1;Parent=gene-RM672_RS00790;Dbxref=GenBank:WP_084276030.1;Name=WP_084276030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166088.1;locus_tag=RM672_RS00790;product=proline dehydrogenase family protein;protein_id=WP_084276030.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 119800 119934 . - . ID=gene-RM672_RS00795;Name=RM672_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00795;old_locus_tag=RM672_00795 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 119800 119934 . - 0 ID=cds-WP_255201402.1;Parent=gene-RM672_RS00795;Dbxref=GenBank:WP_255201402.1;Name=WP_255201402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00795;product=hypothetical protein;protein_id=WP_255201402.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 120149 120481 . + . ID=gene-RM672_RS00800;Name=RM672_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00800;old_locus_tag=RM672_00800 NZ_JAVRJS010000001.1 Protein Homology CDS 120149 120481 . + 0 ID=cds-WP_037574475.1;Parent=gene-RM672_RS00800;Dbxref=GenBank:WP_037574475.1;Name=WP_037574475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425389.1;locus_tag=RM672_RS00800;product=hypothetical protein;protein_id=WP_037574475.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 120679 121500 . + . ID=gene-RM672_RS00805;Name=RM672_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00805;old_locus_tag=RM672_00805 NZ_JAVRJS010000001.1 Protein Homology CDS 120679 121500 . + 0 ID=cds-WP_311539752.1;Parent=gene-RM672_RS00805;Dbxref=GenBank:WP_311539752.1;Name=WP_311539752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=RM672_RS00805;product=alpha/beta fold hydrolase;protein_id=WP_311539752.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 121621 122577 . + . ID=gene-RM672_RS00810;Name=RM672_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00810;old_locus_tag=RM672_00810 NZ_JAVRJS010000001.1 Protein Homology CDS 121621 122577 . + 0 ID=cds-WP_311539751.1;Parent=gene-RM672_RS00810;Dbxref=GenBank:WP_311539751.1;Name=WP_311539751.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425387.1;locus_tag=RM672_RS00810;product=L-lactate dehydrogenase;protein_id=WP_311539751.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 122722 123132 . + . ID=gene-RM672_RS00815;Name=RM672_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00815;old_locus_tag=RM672_00815 NZ_JAVRJS010000001.1 Protein Homology CDS 122722 123132 . + 0 ID=cds-WP_037574466.1;Parent=gene-RM672_RS00815;Dbxref=GenBank:WP_037574466.1;Name=WP_037574466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381988.1;locus_tag=RM672_RS00815;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037574466.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 123250 123822 . - . ID=gene-RM672_RS00820;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=RM672_RS00820;old_locus_tag=RM672_00820 NZ_JAVRJS010000001.1 Protein Homology CDS 123250 123822 . - 0 ID=cds-WP_311539750.1;Parent=gene-RM672_RS00820;Dbxref=GenBank:WP_311539750.1;Name=WP_311539750.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665427.1;locus_tag=RM672_RS00820;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_311539750.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 123819 124778 . - . ID=gene-RM672_RS00825;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=RM672_RS00825;old_locus_tag=RM672_00825 NZ_JAVRJS010000001.1 Protein Homology CDS 123819 124778 . - 0 ID=cds-WP_037574460.1;Parent=gene-RM672_RS00825;Dbxref=GenBank:WP_037574460.1;Name=WP_037574460.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443468.1;locus_tag=RM672_RS00825;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_037574460.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 124890 126071 . + . ID=gene-RM672_RS00830;Name=RM672_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00830;old_locus_tag=RM672_00830 NZ_JAVRJS010000001.1 Protein Homology CDS 124890 126071 . + 0 ID=cds-WP_037574457.1;Parent=gene-RM672_RS00830;Dbxref=GenBank:WP_037574457.1;Name=WP_037574457.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425383.1;locus_tag=RM672_RS00830;product=MDR family MFS transporter;protein_id=WP_037574457.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch binding_site 126203 126386 . + . ID=id-NZ_JAVRJS010000001.1:126203..126386;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000001.1 RefSeq gene 126406 128844 . + . ID=gene-RM672_RS00835;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=RM672_RS00835;old_locus_tag=RM672_00835 NZ_JAVRJS010000001.1 Protein Homology CDS 126406 128844 . + 0 ID=cds-WP_311539749.1;Parent=gene-RM672_RS00835;Dbxref=GenBank:WP_311539749.1;Name=WP_311539749.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=RM672_RS00835;product=leucine--tRNA ligase;protein_id=WP_311539749.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 128871 129182 . + . ID=gene-RM672_RS00840;Name=RM672_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00840;old_locus_tag=RM672_00840 NZ_JAVRJS010000001.1 Protein Homology CDS 128871 129182 . + 0 ID=cds-WP_037574451.1;Parent=gene-RM672_RS00840;Dbxref=GenBank:WP_037574451.1;Name=WP_037574451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166097.1;locus_tag=RM672_RS00840;product=rhodanese-like domain-containing protein;protein_id=WP_037574451.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 129448 130710 . - . ID=gene-RM672_RS00845;Name=RM672_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00845;old_locus_tag=RM672_00845 NZ_JAVRJS010000001.1 Protein Homology CDS 129448 130710 . - 0 ID=cds-WP_103159184.1;Parent=gene-RM672_RS00845;Dbxref=GenBank:WP_103159184.1;Name=WP_103159184.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500375.1;locus_tag=RM672_RS00845;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_103159184.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 130827 132467 . + . ID=gene-RM672_RS00850;Name=RM672_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00850;old_locus_tag=RM672_00850 NZ_JAVRJS010000001.1 Protein Homology CDS 130827 132467 . + 0 ID=cds-WP_311539748.1;Parent=gene-RM672_RS00850;Dbxref=GenBank:WP_311539748.1;Name=WP_311539748.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381978.1;locus_tag=RM672_RS00850;product=putative polysaccharide biosynthesis protein;protein_id=WP_311539748.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 132467 133183 . + . ID=gene-RM672_RS00855;Name=RM672_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00855;old_locus_tag=RM672_00855 NZ_JAVRJS010000001.1 Protein Homology CDS 132467 133183 . + 0 ID=cds-WP_037574445.1;Parent=gene-RM672_RS00855;Dbxref=GenBank:WP_037574445.1;Name=WP_037574445.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507304.1;locus_tag=RM672_RS00855;product=pseudouridine synthase;protein_id=WP_037574445.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 133290 133709 . + . ID=gene-RM672_RS00860;Name=RM672_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00860;old_locus_tag=RM672_00860 NZ_JAVRJS010000001.1 Protein Homology CDS 133290 133709 . + 0 ID=cds-WP_037574442.1;Parent=gene-RM672_RS00860;Dbxref=GenBank:WP_037574442.1;Name=WP_037574442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464301.1;locus_tag=RM672_RS00860;product=hypothetical protein;protein_id=WP_037574442.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 133891 135300 . + . ID=gene-RM672_RS00865;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=RM672_RS00865;old_locus_tag=RM672_00865 NZ_JAVRJS010000001.1 Protein Homology CDS 133891 135300 . + 0 ID=cds-WP_311539746.1;Parent=gene-RM672_RS00865;Dbxref=GenBank:WP_311539746.1;Name=WP_311539746.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=RM672_RS00865;product=dipeptidase PepV;protein_id=WP_311539746.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 135302 136150 . + . ID=gene-RM672_RS00870;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=RM672_RS00870;old_locus_tag=RM672_00870 NZ_JAVRJS010000001.1 Protein Homology CDS 135302 136150 . + 0 ID=cds-WP_311542445.1;Parent=gene-RM672_RS00870;Dbxref=GenBank:WP_311542445.1;Name=WP_311542445.1;Ontology_term=GO:0042853,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510191.1;locus_tag=RM672_RS00870;product=D-amino-acid transaminase;protein_id=WP_311542445.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 136381 137172 . + . ID=gene-RM672_RS00875;Name=RM672_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00875;old_locus_tag=RM672_00875 NZ_JAVRJS010000001.1 Protein Homology CDS 136381 137172 . + 0 ID=cds-WP_037574436.1;Parent=gene-RM672_RS00875;Dbxref=GenBank:WP_037574436.1;Name=WP_037574436.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=RM672_RS00875;product=phosphotransferase family protein;protein_id=WP_037574436.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 137187 137852 . + . ID=gene-RM672_RS00880;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=RM672_RS00880;old_locus_tag=RM672_00880 NZ_JAVRJS010000001.1 Protein Homology CDS 137187 137852 . + 0 ID=cds-WP_037574434.1;Parent=gene-RM672_RS00880;Dbxref=GenBank:WP_037574434.1;Name=WP_037574434.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168407.1;locus_tag=RM672_RS00880;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_037574434.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 137939 138784 . + . ID=gene-RM672_RS00885;Name=RM672_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00885;old_locus_tag=RM672_00885 NZ_JAVRJS010000001.1 Protein Homology CDS 137939 138784 . + 0 ID=cds-WP_107381484.1;Parent=gene-RM672_RS00885;Dbxref=GenBank:WP_107381484.1;Name=WP_107381484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500367.1;locus_tag=RM672_RS00885;product=YtnP family quorum-quenching lactonase;protein_id=WP_107381484.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 138948 139265 . - . ID=gene-RM672_RS00890;Name=RM672_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00890;old_locus_tag=RM672_00890 NZ_JAVRJS010000001.1 Protein Homology CDS 138948 139265 . - 0 ID=cds-WP_311539744.1;Parent=gene-RM672_RS00890;Dbxref=GenBank:WP_311539744.1;Name=WP_311539744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=RM672_RS00890;product=hypothetical protein;protein_id=WP_311539744.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 139348 140427 . + . ID=gene-RM672_RS00895;Name=RM672_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00895;old_locus_tag=RM672_00895 NZ_JAVRJS010000001.1 Protein Homology CDS 139348 140427 . + 0 ID=cds-WP_103159181.1;Parent=gene-RM672_RS00895;Dbxref=GenBank:WP_103159181.1;Name=WP_103159181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507312.1;locus_tag=RM672_RS00895;product=M42 family metallopeptidase;protein_id=WP_103159181.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 140441 140749 . + . ID=gene-RM672_RS00900;Name=RM672_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00900;old_locus_tag=RM672_00900 NZ_JAVRJS010000001.1 Protein Homology CDS 140441 140749 . + 0 ID=cds-WP_037574424.1;Parent=gene-RM672_RS00900;Dbxref=GenBank:WP_037574424.1;Name=WP_037574424.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471204.1;locus_tag=RM672_RS00900;product=thioredoxin family protein;protein_id=WP_037574424.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 140842 141702 . + . ID=gene-RM672_RS00905;Name=RM672_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00905;old_locus_tag=RM672_00905 NZ_JAVRJS010000001.1 Protein Homology CDS 140842 141702 . + 0 ID=cds-WP_105965375.1;Parent=gene-RM672_RS00905;Dbxref=GenBank:WP_105965375.1;Name=WP_105965375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=RM672_RS00905;product=DUF1444 domain-containing protein;protein_id=WP_105965375.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 141711 142310 . + . ID=gene-RM672_RS00910;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=RM672_RS00910;old_locus_tag=RM672_00910 NZ_JAVRJS010000001.1 Protein Homology CDS 141711 142310 . + 0 ID=cds-WP_311539743.1;Parent=gene-RM672_RS00910;Dbxref=GenBank:WP_311539743.1;Name=WP_311539743.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=RM672_RS00910;product=YtpR family tRNA-binding protein;protein_id=WP_311539743.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 142325 145642 . + . ID=gene-RM672_RS00915;Name=RM672_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00915;old_locus_tag=RM672_00915 NZ_JAVRJS010000001.1 Protein Homology CDS 142325 145642 . + 0 ID=cds-WP_311542446.1;Parent=gene-RM672_RS00915;Dbxref=GenBank:WP_311542446.1;Name=WP_311542446.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=RM672_RS00915;product=DNA translocase FtsK;protein_id=WP_311542446.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 145665 146978 . + . ID=gene-RM672_RS00920;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=RM672_RS00920;old_locus_tag=RM672_00920 NZ_JAVRJS010000001.1 Protein Homology CDS 145665 146978 . + 0 ID=cds-WP_311539741.1;Parent=gene-RM672_RS00920;Dbxref=GenBank:WP_311539741.1;Name=WP_311539741.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500360.1;locus_tag=RM672_RS00920;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_311539741.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 147055 147537 . + . ID=gene-RM672_RS00925;Name=RM672_RS00925;end_range=147537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS00925;old_locus_tag=RM672_00925;partial=true;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 147055 147537 . + 0 ID=cds-RM672_RS00925;Parent=gene-RM672_RS00925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=147537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500359.1;locus_tag=RM672_RS00925;partial=true;product=DUF948 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 147889 148824 . + . ID=gene-RM672_RS00930;Name=RM672_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00930;old_locus_tag=RM672_00930 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 147889 148824 . + 0 ID=cds-WP_037574412.1;Parent=gene-RM672_RS00930;Dbxref=GenBank:WP_037574412.1;Name=WP_037574412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS00930;product=hypothetical protein;protein_id=WP_037574412.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 149094 150185 . + . ID=gene-RM672_RS00935;Name=RM672_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00935;old_locus_tag=RM672_00935 NZ_JAVRJS010000001.1 Protein Homology CDS 149094 150185 . + 0 ID=cds-WP_037574409.1;Parent=gene-RM672_RS00935;Dbxref=GenBank:WP_037574409.1;Name=WP_037574409.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=RM672_RS00935;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_037574409.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 150390 151382 . + . ID=gene-RM672_RS00940;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=RM672_RS00940;old_locus_tag=RM672_00940 NZ_JAVRJS010000001.1 Protein Homology CDS 150390 151382 . + 0 ID=cds-WP_037574406.1;Parent=gene-RM672_RS00940;Dbxref=GenBank:WP_037574406.1;Name=WP_037574406.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=RM672_RS00940;product=catabolite control protein A;protein_id=WP_037574406.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 151499 152653 . - . ID=gene-RM672_RS00945;Name=RM672_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00945;old_locus_tag=RM672_00945 NZ_JAVRJS010000001.1 Protein Homology CDS 151499 152653 . - 0 ID=cds-WP_311539740.1;Parent=gene-RM672_RS00945;Dbxref=GenBank:WP_311539740.1;Name=WP_311539740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900585.1;locus_tag=RM672_RS00945;product=acetoin utilization protein AcuC;protein_id=WP_311539740.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 152668 153300 . - . ID=gene-RM672_RS00950;Name=RM672_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00950;old_locus_tag=RM672_00950 NZ_JAVRJS010000001.1 Protein Homology CDS 152668 153300 . - 0 ID=cds-WP_037574400.1;Parent=gene-RM672_RS00950;Dbxref=GenBank:WP_037574400.1;Name=WP_037574400.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=RM672_RS00950;product=GNAT family N-acetyltransferase;protein_id=WP_037574400.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 153456 155165 . + . ID=gene-RM672_RS00955;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=RM672_RS00955;old_locus_tag=RM672_00955 NZ_JAVRJS010000001.1 Protein Homology CDS 153456 155165 . + 0 ID=cds-WP_105965382.1;Parent=gene-RM672_RS00955;Dbxref=GenBank:WP_105965382.1;Name=WP_105965382.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=RM672_RS00955;product=acetate--CoA ligase;protein_id=WP_105965382.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 155598 157265 . + . ID=gene-RM672_RS00960;Name=RM672_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00960;old_locus_tag=RM672_00960 NZ_JAVRJS010000001.1 Protein Homology CDS 155598 157265 . + 0 ID=cds-WP_037574397.1;Parent=gene-RM672_RS00960;Dbxref=GenBank:WP_037574397.1;Name=WP_037574397.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=RM672_RS00960;product=formate--tetrahydrofolate ligase;protein_id=WP_037574397.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 157420 158241 . - . ID=gene-RM672_RS00965;Name=RM672_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00965;old_locus_tag=RM672_00965 NZ_JAVRJS010000001.1 Protein Homology CDS 157420 158241 . - 0 ID=cds-WP_084276034.1;Parent=gene-RM672_RS00965;Dbxref=GenBank:WP_084276034.1;Name=WP_084276034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467399.1;locus_tag=RM672_RS00965;product=transglycosylase domain-containing protein;protein_id=WP_084276034.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 158652 159914 . + . ID=gene-RM672_RS00970;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=RM672_RS00970;old_locus_tag=RM672_00970 NZ_JAVRJS010000001.1 Protein Homology CDS 158652 159914 . + 0 ID=cds-WP_037574392.1;Parent=gene-RM672_RS00970;Dbxref=GenBank:WP_037574392.1;Name=WP_037574392.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=RM672_RS00970;product=tyrosine--tRNA ligase;protein_id=WP_037574392.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 159963 161192 . - . ID=gene-RM672_RS00975;Name=RM672_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00975;old_locus_tag=RM672_00975 NZ_JAVRJS010000001.1 Protein Homology CDS 159963 161192 . - 0 ID=cds-WP_051604965.1;Parent=gene-RM672_RS00975;Dbxref=GenBank:WP_051604965.1;Name=WP_051604965.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507328.1;locus_tag=RM672_RS00975;product=S1C family serine protease;protein_id=WP_051604965.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 161347 161964 . + . ID=gene-RM672_RS00980;Name=RM672_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00980;old_locus_tag=RM672_00980 NZ_JAVRJS010000001.1 Protein Homology CDS 161347 161964 . + 0 ID=cds-WP_107366456.1;Parent=gene-RM672_RS00980;Dbxref=GenBank:WP_107366456.1;Name=WP_107366456.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165051.1;locus_tag=RM672_RS00980;product=lysophospholipid acyltransferase family protein;protein_id=WP_107366456.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 162168 163295 . + . ID=gene-RM672_RS00985;Name=RM672_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00985;old_locus_tag=RM672_00985 NZ_JAVRJS010000001.1 Protein Homology CDS 162168 163295 . + 0 ID=cds-WP_311539196.1;Parent=gene-RM672_RS00985;Dbxref=GenBank:WP_311539196.1;Name=WP_311539196.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=RM672_RS00985;product=HAD family hydrolase;protein_id=WP_311539196.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 163435 165027 . - . ID=gene-RM672_RS00990;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=RM672_RS00990;old_locus_tag=RM672_00990 NZ_JAVRJS010000001.1 Protein Homology CDS 163435 165027 . - 0 ID=cds-WP_311539810.1;Parent=gene-RM672_RS00990;Dbxref=GenBank:WP_311539810.1;Name=WP_311539810.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500339.1;locus_tag=RM672_RS00990;product=phosphoglycerate dehydrogenase;protein_id=WP_311539810.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 165017 166177 . - . ID=gene-RM672_RS00995;Name=RM672_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS00995;old_locus_tag=RM672_00995 NZ_JAVRJS010000001.1 Protein Homology CDS 165017 166177 . - 0 ID=cds-WP_103159172.1;Parent=gene-RM672_RS00995;Dbxref=GenBank:WP_103159172.1;Name=WP_103159172.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=RM672_RS00995;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_103159172.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 166267 166713 . - . ID=gene-RM672_RS01000;Name=RM672_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01000;old_locus_tag=RM672_01000 NZ_JAVRJS010000001.1 Protein Homology CDS 166267 166713 . - 0 ID=cds-WP_103159171.1;Parent=gene-RM672_RS01000;Dbxref=GenBank:WP_103159171.1;Name=WP_103159171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=RM672_RS01000;product=SACOL1771 family peroxiredoxin;protein_id=WP_103159171.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 166790 167533 . + . ID=gene-RM672_RS01005;Name=RM672_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01005;old_locus_tag=RM672_01005 NZ_JAVRJS010000001.1 Protein Homology CDS 166790 167533 . + 0 ID=cds-WP_103159170.1;Parent=gene-RM672_RS01005;Dbxref=GenBank:WP_103159170.1;Name=WP_103159170.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176108.1;locus_tag=RM672_RS01005;product=glycerophosphodiester phosphodiesterase;protein_id=WP_103159170.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 167664 168623 . - . ID=gene-RM672_RS01010;Name=RM672_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01010;old_locus_tag=RM672_01010 NZ_JAVRJS010000001.1 Protein Homology CDS 167664 168623 . - 0 ID=cds-WP_103159169.1;Parent=gene-RM672_RS01010;Dbxref=GenBank:WP_103159169.1;Name=WP_103159169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766912.1;locus_tag=RM672_RS01010;product=ornithine cyclodeaminase family protein;protein_id=WP_103159169.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 168792 169394 . - . ID=gene-RM672_RS01015;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=RM672_RS01015;old_locus_tag=RM672_01015 NZ_JAVRJS010000001.1 Protein Homology CDS 168792 169394 . - 0 ID=cds-WP_103159168.1;Parent=gene-RM672_RS01015;Dbxref=GenBank:WP_103159168.1;Name=WP_103159168.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=RM672_RS01015;product=30S ribosomal protein S4;protein_id=WP_103159168.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 169622 170077 . - . ID=gene-RM672_RS01020;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=RM672_RS01020;old_locus_tag=RM672_01020 NZ_JAVRJS010000001.1 Protein Homology CDS 169622 170077 . - 0 ID=cds-WP_037574375.1;Parent=gene-RM672_RS01020;Dbxref=GenBank:WP_037574375.1;Name=WP_037574375.1;Note=Replaces NBR011098.;Ontology_term=GO:0033745;gbkey=CDS;gene=msrC;go_function=L-methionine (R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165371.1;locus_tag=RM672_RS01020;product=free L-methionine (R)-S-oxide reductase MsrC;protein_id=WP_037574375.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 170247 171947 . + . ID=gene-RM672_RS01025;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=RM672_RS01025;old_locus_tag=RM672_01025 NZ_JAVRJS010000001.1 Protein Homology CDS 170247 171947 . + 0 ID=cds-WP_103159167.1;Parent=gene-RM672_RS01025;Dbxref=GenBank:WP_103159167.1;Name=WP_103159167.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425340.1;locus_tag=RM672_RS01025;product=septation ring formation regulator EzrA;protein_id=WP_103159167.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 172224 173360 . + . ID=gene-RM672_RS01030;Name=RM672_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01030;old_locus_tag=RM672_01030 NZ_JAVRJS010000001.1 Protein Homology CDS 172224 173360 . + 0 ID=cds-WP_311539739.1;Parent=gene-RM672_RS01030;Dbxref=GenBank:WP_311539739.1;Name=WP_311539739.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=RM672_RS01030;product=cysteine desulfurase family protein;protein_id=WP_311539739.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 173357 174577 . + . ID=gene-RM672_RS01035;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=RM672_RS01035;old_locus_tag=RM672_01035 NZ_JAVRJS010000001.1 Protein Homology CDS 173357 174577 . + 0 ID=cds-WP_311539738.1;Parent=gene-RM672_RS01035;Dbxref=GenBank:WP_311539738.1;Name=WP_311539738.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474712.1;locus_tag=RM672_RS01035;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_311539738.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 174598 175371 . + . ID=gene-RM672_RS01040;Name=RM672_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01040;old_locus_tag=RM672_01040 NZ_JAVRJS010000001.1 Protein Homology CDS 174598 175371 . + 0 ID=cds-WP_037574367.1;Parent=gene-RM672_RS01040;Dbxref=GenBank:WP_037574367.1;Name=WP_037574367.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500328.1;locus_tag=RM672_RS01040;product=sulfite exporter TauE/SafE family protein;protein_id=WP_037574367.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 175461 175955 . + . ID=gene-RM672_RS01045;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=RM672_RS01045;old_locus_tag=RM672_01045 NZ_JAVRJS010000001.1 Protein Homology CDS 175461 175955 . + 0 ID=cds-WP_311539737.1;Parent=gene-RM672_RS01045;Dbxref=GenBank:WP_311539737.1;Name=WP_311539737.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275511.1;locus_tag=RM672_RS01045;product=thiol peroxidase;protein_id=WP_311539737.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 176027 176974 . + . ID=gene-RM672_RS01050;Name=RM672_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01050;old_locus_tag=RM672_01050 NZ_JAVRJS010000001.1 Protein Homology CDS 176027 176974 . + 0 ID=cds-WP_107398781.1;Parent=gene-RM672_RS01050;Dbxref=GenBank:WP_107398781.1;Name=WP_107398781.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832682.1;locus_tag=RM672_RS01050;product=class I SAM-dependent methyltransferase;protein_id=WP_107398781.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 177056 178252 . + . ID=gene-RM672_RS01055;Name=RM672_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01055;old_locus_tag=RM672_01055 NZ_JAVRJS010000001.1 Protein Homology CDS 177056 178252 . + 0 ID=cds-WP_311539736.1;Parent=gene-RM672_RS01055;Dbxref=GenBank:WP_311539736.1;Name=WP_311539736.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275513.1;locus_tag=RM672_RS01055;product=acetate kinase;protein_id=WP_311539736.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 178449 178949 . - . ID=gene-RM672_RS01060;Name=RM672_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01060;old_locus_tag=RM672_01060 NZ_JAVRJS010000001.1 Protein Homology CDS 178449 178949 . - 0 ID=cds-WP_037574358.1;Parent=gene-RM672_RS01060;Dbxref=GenBank:WP_037574358.1;Name=WP_037574358.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=RM672_RS01060;product=universal stress protein;protein_id=WP_037574358.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 179097 180212 . + . ID=gene-RM672_RS01065;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=RM672_RS01065;old_locus_tag=RM672_01065 NZ_JAVRJS010000001.1 Protein Homology CDS 179097 180212 . + 0 ID=cds-WP_103159070.1;Parent=gene-RM672_RS01065;Dbxref=GenBank:WP_103159070.1;Name=WP_103159070.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500323.1;locus_tag=RM672_RS01065;product=alanine dehydrogenase;protein_id=WP_103159070.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 180290 181345 . - . ID=gene-RM672_RS01070;Name=RM672_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01070;old_locus_tag=RM672_01070 NZ_JAVRJS010000001.1 Protein Homology CDS 180290 181345 . - 0 ID=cds-WP_037574355.1;Parent=gene-RM672_RS01070;Dbxref=GenBank:WP_037574355.1;Name=WP_037574355.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=RM672_RS01070;product=M24 family metallopeptidase;protein_id=WP_037574355.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 181468 182163 . + . ID=gene-RM672_RS01075;Name=RM672_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01075;old_locus_tag=RM672_01075 NZ_JAVRJS010000001.1 Protein Homology CDS 181468 182163 . + 0 ID=cds-WP_037574354.1;Parent=gene-RM672_RS01075;Dbxref=GenBank:WP_037574354.1;Name=WP_037574354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503615.1;locus_tag=RM672_RS01075;product=metal-dependent hydrolase;protein_id=WP_037574354.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 182319 182732 . - . ID=gene-RM672_RS01080;Name=RM672_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01080;old_locus_tag=RM672_01080 NZ_JAVRJS010000001.1 Protein Homology CDS 182319 182732 . - 0 ID=cds-WP_311539809.1;Parent=gene-RM672_RS01080;Dbxref=GenBank:WP_311539809.1;Name=WP_311539809.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=RM672_RS01080;product=universal stress protein;protein_id=WP_311539809.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 182918 184213 . + . ID=gene-RM672_RS01085;Name=RM672_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01085;old_locus_tag=RM672_01085 NZ_JAVRJS010000001.1 Protein Homology CDS 182918 184213 . + 0 ID=cds-WP_103159068.1;Parent=gene-RM672_RS01085;Dbxref=GenBank:WP_103159068.1;Name=WP_103159068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=RM672_RS01085;product=DRTGG domain-containing protein;protein_id=WP_103159068.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 184227 185162 . + . ID=gene-RM672_RS01090;Name=RM672_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01090;old_locus_tag=RM672_01090 NZ_JAVRJS010000001.1 Protein Homology CDS 184227 185162 . + 0 ID=cds-WP_311539734.1;Parent=gene-RM672_RS01090;Dbxref=GenBank:WP_311539734.1;Name=WP_311539734.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665952.1;locus_tag=RM672_RS01090;product=DHH family phosphoesterase;protein_id=WP_311539734.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 185187 188384 . + . ID=gene-RM672_RS01095;Name=RM672_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01095;old_locus_tag=RM672_01095 NZ_JAVRJS010000001.1 Protein Homology CDS 185187 188384 . + 0 ID=cds-WP_311539733.1;Parent=gene-RM672_RS01095;Dbxref=GenBank:WP_311539733.1;Name=WP_311539733.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613673.1;locus_tag=RM672_RS01095;product=DNA polymerase III subunit alpha;protein_id=WP_311539733.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 188502 189731 . + . ID=gene-RM672_RS01100;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=RM672_RS01100;old_locus_tag=RM672_01100 NZ_JAVRJS010000001.1 Protein Homology CDS 188502 189731 . + 0 ID=cds-WP_105962868.1;Parent=gene-RM672_RS01100;Dbxref=GenBank:WP_105962868.1;Name=WP_105962868.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500315.1;locus_tag=RM672_RS01100;product=NADP-dependent malic enzyme;protein_id=WP_105962868.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 189768 190628 . + . ID=gene-RM672_RS01105;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=RM672_RS01105;old_locus_tag=RM672_01105 NZ_JAVRJS010000001.1 Protein Homology CDS 189768 190628 . + 0 ID=cds-WP_103159064.1;Parent=gene-RM672_RS01105;Dbxref=GenBank:WP_103159064.1;Name=WP_103159064.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440197.1;locus_tag=RM672_RS01105;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_103159064.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 190628 191572 . + . ID=gene-RM672_RS01110;Name=RM672_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01110;old_locus_tag=RM672_01110 NZ_JAVRJS010000001.1 Protein Homology CDS 190628 191572 . + 0 ID=cds-WP_105962867.1;Parent=gene-RM672_RS01110;Dbxref=GenBank:WP_105962867.1;Name=WP_105962867.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=RM672_RS01110;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_105962867.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 191932 192903 . + . ID=gene-RM672_RS01115;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=RM672_RS01115;old_locus_tag=RM672_01115 NZ_JAVRJS010000001.1 Protein Homology CDS 191932 192903 . + 0 ID=cds-WP_311539732.1;Parent=gene-RM672_RS01115;Dbxref=GenBank:WP_311539732.1;Name=WP_311539732.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=RM672_RS01115;product=6-phosphofructokinase;protein_id=WP_311539732.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 192920 194680 . + . ID=gene-RM672_RS01120;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=RM672_RS01120;old_locus_tag=RM672_01120 NZ_JAVRJS010000001.1 Protein Homology CDS 192920 194680 . + 0 ID=cds-WP_037574336.1;Parent=gene-RM672_RS01120;Dbxref=GenBank:WP_037574336.1;Name=WP_037574336.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=RM672_RS01120;product=pyruvate kinase;protein_id=WP_037574336.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 195080 196201 . + . ID=gene-RM672_RS01125;Name=RM672_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01125;old_locus_tag=RM672_01125 NZ_JAVRJS010000001.1 Protein Homology CDS 195080 196201 . + 0 ID=cds-WP_311539731.1;Parent=gene-RM672_RS01125;Dbxref=GenBank:WP_311539731.1;Name=WP_311539731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502341.1;locus_tag=RM672_RS01125;product=citrate synthase;protein_id=WP_311539731.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 196251 197513 . + . ID=gene-RM672_RS01130;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=RM672_RS01130;old_locus_tag=RM672_01130 NZ_JAVRJS010000001.1 Protein Homology CDS 196251 197513 . + 0 ID=cds-WP_107366492.1;Parent=gene-RM672_RS01130;Dbxref=GenBank:WP_107366492.1;Name=WP_107366492.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613680.1;locus_tag=RM672_RS01130;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_107366492.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 197853 198557 . + . ID=gene-RM672_RS01135;Name=RM672_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01135;old_locus_tag=RM672_01135 NZ_JAVRJS010000001.1 Protein Homology CDS 197853 198557 . + 0 ID=cds-WP_037574326.1;Parent=gene-RM672_RS01135;Dbxref=GenBank:WP_037574326.1;Name=WP_037574326.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=RM672_RS01135;product=response regulator transcription factor;protein_id=WP_037574326.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 198558 200258 . + . ID=gene-RM672_RS01140;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=RM672_RS01140;old_locus_tag=RM672_01140 NZ_JAVRJS010000001.1 Protein Homology CDS 198558 200258 . + 0 ID=cds-WP_311539730.1;Parent=gene-RM672_RS01140;Dbxref=GenBank:WP_311539730.1;Name=WP_311539730.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=RM672_RS01140;product=two-component system histidine kinase PnpS;protein_id=WP_311539730.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 200485 203112 . + . ID=gene-RM672_RS01145;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=RM672_RS01145;old_locus_tag=RM672_01145 NZ_JAVRJS010000001.1 Protein Homology CDS 200485 203112 . + 0 ID=cds-WP_037574321.1;Parent=gene-RM672_RS01145;Dbxref=GenBank:WP_037574321.1;Name=WP_037574321.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=RM672_RS01145;product=DNA polymerase I;protein_id=WP_037574321.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 203128 204000 . + . ID=gene-RM672_RS01150;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=RM672_RS01150;old_locus_tag=RM672_01150 NZ_JAVRJS010000001.1 Protein Homology CDS 203128 204000 . + 0 ID=cds-WP_037574318.1;Parent=gene-RM672_RS01150;Dbxref=GenBank:WP_037574318.1;Name=WP_037574318.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=RM672_RS01150;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_037574318.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 204016 204621 . + . ID=gene-RM672_RS01155;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=RM672_RS01155;old_locus_tag=RM672_01155 NZ_JAVRJS010000001.1 Protein Homology CDS 204016 204621 . + 0 ID=cds-WP_105962861.1;Parent=gene-RM672_RS01155;Dbxref=GenBank:WP_105962861.1;Name=WP_105962861.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493142.1;locus_tag=RM672_RS01155;product=dephospho-CoA kinase;protein_id=WP_105962861.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 204850 205860 . + . ID=gene-RM672_RS01160;Name=RM672_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01160;old_locus_tag=RM672_01160 NZ_JAVRJS010000001.1 Protein Homology CDS 204850 205860 . + 0 ID=cds-WP_037574312.1;Parent=gene-RM672_RS01160;Dbxref=GenBank:WP_037574312.1;Name=WP_037574312.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=RM672_RS01160;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037574312.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 205994 206461 . + . ID=gene-RM672_RS01165;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=RM672_RS01165;old_locus_tag=RM672_01165 NZ_JAVRJS010000001.1 Protein Homology CDS 205994 206461 . + 0 ID=cds-WP_037574309.1;Parent=gene-RM672_RS01165;Dbxref=GenBank:WP_037574309.1;Name=WP_037574309.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=RM672_RS01165;product=transcriptional regulator NrdR;protein_id=WP_037574309.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 206463 207824 . + . ID=gene-RM672_RS01170;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM672_RS01170;old_locus_tag=RM672_01170 NZ_JAVRJS010000001.1 Protein Homology CDS 206463 207824 . + 0 ID=cds-WP_233654862.1;Parent=gene-RM672_RS01170;Dbxref=GenBank:WP_233654862.1;Name=WP_233654862.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=RM672_RS01170;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_233654862.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 207821 208744 . + . ID=gene-RM672_RS01175;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=RM672_RS01175;old_locus_tag=RM672_01175 NZ_JAVRJS010000001.1 Protein Homology CDS 207821 208744 . + 0 ID=cds-WP_107363401.1;Parent=gene-RM672_RS01175;Dbxref=GenBank:WP_107363401.1;Name=WP_107363401.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425307.1;locus_tag=RM672_RS01175;product=primosomal protein DnaI;protein_id=WP_107363401.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 209048 210985 . + . ID=gene-RM672_RS01180;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=RM672_RS01180;old_locus_tag=RM672_01180 NZ_JAVRJS010000001.1 Protein Homology CDS 209048 210985 . + 0 ID=cds-WP_037574303.1;Parent=gene-RM672_RS01180;Dbxref=GenBank:WP_037574303.1;Name=WP_037574303.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=RM672_RS01180;product=threonine--tRNA ligase;protein_id=WP_037574303.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch riboswitch 211037 211211 . + . ID=id-NZ_JAVRJS010000001.1:211037..211211;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000001.1 RefSeq gene 211318 212826 . + . ID=gene-RM672_RS01185;Name=RM672_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01185;old_locus_tag=RM672_01185 NZ_JAVRJS010000001.1 Protein Homology CDS 211318 212826 . + 0 ID=cds-WP_311539729.1;Parent=gene-RM672_RS01185;Dbxref=GenBank:WP_311539729.1;Name=WP_311539729.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500292.1;locus_tag=RM672_RS01185;product=amino acid permease;protein_id=WP_311539729.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch sequence_feature 212868 213002 . + . ID=id-NZ_JAVRJS010000001.1:212868..213002;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00558,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000001.1 RefSeq gene 213028 213555 . + . ID=gene-RM672_RS01190;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=RM672_RS01190;old_locus_tag=RM672_01190 NZ_JAVRJS010000001.1 Protein Homology CDS 213028 213555 . + 0 ID=cds-WP_037574628.1;Parent=gene-RM672_RS01190;Dbxref=GenBank:WP_037574628.1;Name=WP_037574628.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=RM672_RS01190;product=translation initiation factor IF-3;protein_id=WP_037574628.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 213582 213782 . + . ID=gene-RM672_RS01195;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=RM672_RS01195;old_locus_tag=RM672_01195 NZ_JAVRJS010000001.1 Protein Homology CDS 213582 213782 . + 0 ID=cds-WP_014613694.1;Parent=gene-RM672_RS01195;Dbxref=GenBank:WP_014613694.1;Name=WP_014613694.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=RM672_RS01195;product=50S ribosomal protein L35;protein_id=WP_014613694.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 213837 214193 . + . ID=gene-RM672_RS01200;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=RM672_RS01200;old_locus_tag=RM672_01200 NZ_JAVRJS010000001.1 Protein Homology CDS 213837 214193 . + 0 ID=cds-WP_037574297.1;Parent=gene-RM672_RS01200;Dbxref=GenBank:WP_037574297.1;Name=WP_037574297.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=RM672_RS01200;product=50S ribosomal protein L20;protein_id=WP_037574297.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 214345 214956 . + . ID=gene-RM672_RS01205;Name=RM672_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01205;old_locus_tag=RM672_01205 NZ_JAVRJS010000001.1 Protein Homology CDS 214345 214956 . + 0 ID=cds-WP_105962857.1;Parent=gene-RM672_RS01205;Dbxref=GenBank:WP_105962857.1;Name=WP_105962857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835437.1;locus_tag=RM672_RS01205;product=NUDIX domain-containing protein;protein_id=WP_105962857.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 214966 215889 . + . ID=gene-RM672_RS01210;Name=RM672_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01210;old_locus_tag=RM672_01210 NZ_JAVRJS010000001.1 Protein Homology CDS 214966 215889 . + 0 ID=cds-WP_311541260.1;Parent=gene-RM672_RS01210;Dbxref=GenBank:WP_311541260.1;Name=WP_311541260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425300.1;locus_tag=RM672_RS01210;product=hypothetical protein;protein_id=WP_311541260.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 215974 217287 . + . ID=gene-RM672_RS01215;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=RM672_RS01215;old_locus_tag=RM672_01215 NZ_JAVRJS010000001.1 Protein Homology CDS 215974 217287 . + 0 ID=cds-WP_105965405.1;Parent=gene-RM672_RS01215;Dbxref=GenBank:WP_105965405.1;Name=WP_105965405.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=RM672_RS01215;product=trigger factor;protein_id=WP_105965405.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 217483 218745 . + . ID=gene-RM672_RS01220;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=RM672_RS01220;old_locus_tag=RM672_01220 NZ_JAVRJS010000001.1 Protein Homology CDS 217483 218745 . + 0 ID=cds-WP_103159056.1;Parent=gene-RM672_RS01220;Dbxref=GenBank:WP_103159056.1;Name=WP_103159056.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=RM672_RS01220;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_103159056.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 218817 219410 . + . ID=gene-RM672_RS01225;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=RM672_RS01225;old_locus_tag=RM672_01225 NZ_JAVRJS010000001.1 Protein Homology CDS 218817 219410 . + 0 ID=cds-WP_103159055.1;Parent=gene-RM672_RS01225;Dbxref=GenBank:WP_103159055.1;Name=WP_103159055.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425297.1;locus_tag=RM672_RS01225;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_103159055.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 219526 220866 . + . ID=gene-RM672_RS01230;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=RM672_RS01230;old_locus_tag=RM672_01230 NZ_JAVRJS010000001.1 Protein Homology CDS 219526 220866 . + 0 ID=cds-WP_037574280.1;Parent=gene-RM672_RS01230;Dbxref=GenBank:WP_037574280.1;Name=WP_037574280.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase (NADP+) activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381867.1;locus_tag=RM672_RS01230;product=glutamyl-tRNA reductase;protein_id=WP_037574280.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 220881 221717 . + . ID=gene-RM672_RS01235;Name=RM672_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01235;old_locus_tag=RM672_01235 NZ_JAVRJS010000001.1 Protein Homology CDS 220881 221717 . + 0 ID=cds-WP_037574277.1;Parent=gene-RM672_RS01235;Dbxref=GenBank:WP_037574277.1;Name=WP_037574277.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729282.1;locus_tag=RM672_RS01235;product=cytochrome C assembly family protein;protein_id=WP_037574277.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 221739 222665 . + . ID=gene-RM672_RS01240;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=RM672_RS01240;old_locus_tag=RM672_01240 NZ_JAVRJS010000001.1 Protein Homology CDS 221739 222665 . + 0 ID=cds-WP_103159054.1;Parent=gene-RM672_RS01240;Dbxref=GenBank:WP_103159054.1;Name=WP_103159054.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500279.1;locus_tag=RM672_RS01240;product=hydroxymethylbilane synthase;protein_id=WP_103159054.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 222676 223365 . + . ID=gene-RM672_RS01245;Name=RM672_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01245;old_locus_tag=RM672_01245 NZ_JAVRJS010000001.1 Protein Homology CDS 222676 223365 . + 0 ID=cds-WP_037574271.1;Parent=gene-RM672_RS01245;Dbxref=GenBank:WP_037574271.1;Name=WP_037574271.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,obsolete protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=RM672_RS01245;product=uroporphyrinogen-III synthase;protein_id=WP_037574271.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 223355 224332 . + . ID=gene-RM672_RS01250;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=RM672_RS01250;old_locus_tag=RM672_01250 NZ_JAVRJS010000001.1 Protein Homology CDS 223355 224332 . + 0 ID=cds-WP_037574625.1;Parent=gene-RM672_RS01250;Dbxref=GenBank:WP_037574625.1;Name=WP_037574625.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=RM672_RS01250;product=porphobilinogen synthase;protein_id=WP_037574625.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 224345 225628 . + . ID=gene-RM672_RS01255;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=RM672_RS01255;old_locus_tag=RM672_01255 NZ_JAVRJS010000001.1 Protein Homology CDS 224345 225628 . + 0 ID=cds-WP_165885658.1;Parent=gene-RM672_RS01255;Dbxref=GenBank:WP_165885658.1;Name=WP_165885658.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458906.1;locus_tag=RM672_RS01255;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_165885658.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 225790 226872 . + . ID=gene-RM672_RS01260;Name=RM672_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01260;old_locus_tag=RM672_01260 NZ_JAVRJS010000001.1 Protein Homology CDS 225790 226872 . + 0 ID=cds-WP_311541261.1;Parent=gene-RM672_RS01260;Dbxref=GenBank:WP_311541261.1;Name=WP_311541261.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443295.1;locus_tag=RM672_RS01260;product=AbrB family protein;protein_id=WP_311541261.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 226906 227454 . - . ID=gene-RM672_RS01265;Name=RM672_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01265;old_locus_tag=RM672_01265 NZ_JAVRJS010000001.1 Protein Homology CDS 226906 227454 . - 0 ID=cds-WP_103159052.1;Parent=gene-RM672_RS01265;Dbxref=GenBank:WP_103159052.1;Name=WP_103159052.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=RM672_RS01265;product=DNA-3-methyladenine glycosylase I;protein_id=WP_103159052.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch binding_site 227511 227720 . + . ID=id-NZ_JAVRJS010000001.1:227511..227720;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000001.1 RefSeq gene 227761 230391 . + . ID=gene-RM672_RS01270;Name=RM672_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01270;old_locus_tag=RM672_01270 NZ_JAVRJS010000001.1 Protein Homology CDS 227761 230391 . + 0 ID=cds-WP_311541262.1;Parent=gene-RM672_RS01270;Dbxref=GenBank:WP_311541262.1;Name=WP_311541262.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=RM672_RS01270;product=valine--tRNA ligase;protein_id=WP_311541262.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 230403 231665 . + . ID=gene-RM672_RS01275;Name=RM672_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01275;old_locus_tag=RM672_01275 NZ_JAVRJS010000001.1 Protein Homology CDS 230403 231665 . + 0 ID=cds-WP_311539722.1;Parent=gene-RM672_RS01275;Dbxref=GenBank:WP_311539722.1;Name=WP_311539722.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510278.1;locus_tag=RM672_RS01275;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_311539722.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 231844 232545 . + . ID=gene-RM672_RS11395;Name=RM672_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11395 NZ_JAVRJS010000001.1 Protein Homology CDS 231844 232545 . + 0 ID=cds-WP_311541295.1;Parent=gene-RM672_RS11395;Dbxref=GenBank:WP_311541295.1;Name=WP_311541295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=RM672_RS11395;product=prepilin peptidase;protein_id=WP_311541295.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 232545 233105 . + . ID=gene-RM672_RS01280;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=RM672_RS01280;old_locus_tag=RM672_01280 NZ_JAVRJS010000001.1 Protein Homology CDS 232545 233105 . + 0 ID=cds-WP_311539720.1;Parent=gene-RM672_RS01280;Dbxref=GenBank:WP_311539720.1;Name=WP_311539720.1;gbkey=CDS;gene=radC;inference=COORDINATES: protein motif:HMM:TIGR00608.1;locus_tag=RM672_RS01280;product=RadC family protein;protein_id=WP_311539720.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 233224 234309 . + . ID=gene-RM672_RS01285;Name=RM672_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01285;old_locus_tag=RM672_01285 NZ_JAVRJS010000001.1 Protein Homology CDS 233224 234309 . + 0 ID=cds-WP_311539719.1;Parent=gene-RM672_RS01285;Dbxref=GenBank:WP_311539719.1;Name=WP_311539719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300186.1;locus_tag=RM672_RS01285;product=phage lytic cycle repressor MrpR family protein;protein_id=WP_311539719.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 234306 236198 . + . ID=gene-RM672_RS01290;Name=RM672_RS01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS01290;old_locus_tag=RM672_01290;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 234306 236198 . + 0 ID=cds-RM672_RS01290;Parent=gene-RM672_RS01290;Note=internal stop;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833801.1;locus_tag=RM672_RS01290;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 236205 236582 . + . ID=gene-RM672_RS01295;Name=RM672_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01295;old_locus_tag=RM672_01295 NZ_JAVRJS010000001.1 Protein Homology CDS 236205 236582 . + 0 ID=cds-WP_311539718.1;Parent=gene-RM672_RS01295;Dbxref=GenBank:WP_311539718.1;Name=WP_311539718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361059.1;locus_tag=RM672_RS01295;product=DUF6262 family protein;protein_id=WP_311539718.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 236695 237216 . + . ID=gene-RM672_RS01300;Name=RM672_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01300;old_locus_tag=RM672_01300 NZ_JAVRJS010000001.1 Protein Homology CDS 236695 237216 . + 0 ID=cds-WP_311539717.1;Parent=gene-RM672_RS01300;Dbxref=GenBank:WP_311539717.1;Name=WP_311539717.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020059212.1;locus_tag=RM672_RS01300;product=DinB family protein;protein_id=WP_311539717.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 237408 237929 . + . ID=gene-RM672_RS01305;Name=RM672_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01305;old_locus_tag=RM672_01305 NZ_JAVRJS010000001.1 Protein Homology CDS 237408 237929 . + 0 ID=cds-WP_311539716.1;Parent=gene-RM672_RS01305;Dbxref=GenBank:WP_311539716.1;Name=WP_311539716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017187403.1;locus_tag=RM672_RS01305;product=GNAT family N-acetyltransferase;protein_id=WP_311539716.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 238282 239121 . + . ID=gene-RM672_RS01310;Name=RM672_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01310;old_locus_tag=RM672_01310 NZ_JAVRJS010000001.1 Protein Homology CDS 238282 239121 . + 0 ID=cds-WP_311541264.1;Parent=gene-RM672_RS01310;Dbxref=GenBank:WP_311541264.1;Name=WP_311541264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002167227.1;locus_tag=RM672_RS01310;product=abortive infection family protein;protein_id=WP_311541264.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 239224 239505 . + . ID=gene-RM672_RS01315;Name=RM672_RS01315;end_range=239505,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS01315;old_locus_tag=RM672_01315;partial=true;pseudo=true NZ_JAVRJS010000001.1 Protein Homology CDS 239224 239505 . + 0 ID=cds-RM672_RS01315;Parent=gene-RM672_RS01315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=239505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044293.1;locus_tag=RM672_RS01315;partial=true;product=heteromeric transposase endonuclease subunit TnsA;pseudo=true;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 239501 240361 . + . ID=gene-RM672_RS01320;Name=RM672_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01320;old_locus_tag=RM672_01320 NZ_JAVRJS010000001.1 Protein Homology CDS 239501 240361 . + 0 ID=cds-WP_311541265.1;Parent=gene-RM672_RS01320;Dbxref=GenBank:WP_311541265.1;Name=WP_311541265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016084054.1;locus_tag=RM672_RS01320;product=hypothetical protein;protein_id=WP_311541265.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 240288 241037 . + . ID=gene-RM672_RS01325;Name=RM672_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01325;old_locus_tag=RM672_01325 NZ_JAVRJS010000001.1 Protein Homology CDS 240288 241037 . + 0 ID=cds-WP_311539712.1;Parent=gene-RM672_RS01325;Dbxref=GenBank:WP_311539712.1;Name=WP_311539712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037363.8;locus_tag=RM672_RS01325;product=Tn7-like element transposition protein TnsE;protein_id=WP_311539712.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 241141 243780 . + . ID=gene-RM672_RS01330;Name=RM672_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01330;old_locus_tag=RM672_01330 NZ_JAVRJS010000001.1 Protein Homology CDS 241141 243780 . + 0 ID=cds-WP_311539711.1;Parent=gene-RM672_RS01330;Dbxref=GenBank:WP_311539711.1;Name=WP_311539711.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF014516.7;locus_tag=RM672_RS01330;product=AAA family ATPase;protein_id=WP_311539711.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 244584 246155 . + . ID=gene-RM672_RS01335;Name=RM672_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01335;old_locus_tag=RM672_01335 NZ_JAVRJS010000001.1 Protein Homology CDS 244584 246155 . + 0 ID=cds-WP_311539710.1;Parent=gene-RM672_RS01335;Dbxref=GenBank:WP_311539710.1;Name=WP_311539710.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010651915.1;locus_tag=RM672_RS01335;product=Vga family ABC-F type ribosomal protection protein;protein_id=WP_311539710.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 246502 246648 . + . ID=gene-RM672_RS01340;Name=RM672_RS01340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS01340;old_locus_tag=RM672_01340;partial=true;pseudo=true;start_range=.,246502 NZ_JAVRJS010000001.1 Protein Homology CDS 246502 246648 . + 0 ID=cds-RM672_RS01340;Parent=gene-RM672_RS01340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=RM672_RS01340;partial=true;product=JAB domain-containing protein;pseudo=true;start_range=.,246502;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 246989 247447 . + . ID=gene-RM672_RS01345;Name=RM672_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01345;old_locus_tag=RM672_01345 NZ_JAVRJS010000001.1 Protein Homology CDS 246989 247447 . + 0 ID=cds-WP_037574248.1;Parent=gene-RM672_RS01345;Dbxref=GenBank:WP_037574248.1;Name=WP_037574248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=RM672_RS01345;product=DUF4930 family protein;protein_id=WP_037574248.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 247521 247658 . + . ID=gene-RM672_RS01350;Name=RM672_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01350;old_locus_tag=RM672_01350 NZ_JAVRJS010000001.1 Protein Homology CDS 247521 247658 . + 0 ID=cds-WP_165806092.1;Parent=gene-RM672_RS01350;Dbxref=GenBank:WP_165806092.1;Name=WP_165806092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471526.1;locus_tag=RM672_RS01350;product=hypothetical protein;protein_id=WP_165806092.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 248201 249037 . + . ID=gene-RM672_RS01355;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=RM672_RS01355;old_locus_tag=RM672_01355 NZ_JAVRJS010000001.1 Protein Homology CDS 248201 249037 . + 0 ID=cds-WP_105965412.1;Parent=gene-RM672_RS01355;Dbxref=GenBank:WP_105965412.1;Name=WP_105965412.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=RM672_RS01355;product=rod shape-determining protein MreC;protein_id=WP_105965412.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 249034 249558 . + . ID=gene-RM672_RS01360;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=RM672_RS01360;old_locus_tag=RM672_01360 NZ_JAVRJS010000001.1 Protein Homology CDS 249034 249558 . + 0 ID=cds-WP_107360770.1;Parent=gene-RM672_RS01360;Dbxref=GenBank:WP_107360770.1;Name=WP_107360770.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:NF016019.7;locus_tag=RM672_RS01360;product=rod shape-determining protein MreD;protein_id=WP_107360770.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch sequence_feature 249587 249659 . + . ID=id-NZ_JAVRJS010000001.1:249587..249659;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00559,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000001.1 RefSeq gene 249671 249979 . + . ID=gene-RM672_RS01365;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=RM672_RS01365;old_locus_tag=RM672_01365 NZ_JAVRJS010000001.1 Protein Homology CDS 249671 249979 . + 0 ID=cds-WP_037574239.1;Parent=gene-RM672_RS01365;Dbxref=GenBank:WP_037574239.1;Name=WP_037574239.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364931.1;locus_tag=RM672_RS01365;product=50S ribosomal protein L21;protein_id=WP_037574239.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 249982 250302 . + . ID=gene-RM672_RS01370;Name=RM672_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01370;old_locus_tag=RM672_01370 NZ_JAVRJS010000001.1 Protein Homology CDS 249982 250302 . + 0 ID=cds-WP_037574236.1;Parent=gene-RM672_RS01370;Dbxref=GenBank:WP_037574236.1;Name=WP_037574236.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=RM672_RS01370;product=ribosomal-processing cysteine protease Prp;protein_id=WP_037574236.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 250313 250597 . + . ID=gene-RM672_RS01375;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=RM672_RS01375;old_locus_tag=RM672_01375 NZ_JAVRJS010000001.1 Protein Homology CDS 250313 250597 . + 0 ID=cds-WP_037574233.1;Parent=gene-RM672_RS01375;Dbxref=GenBank:WP_037574233.1;Name=WP_037574233.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=RM672_RS01375;product=50S ribosomal protein L27;protein_id=WP_037574233.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 250828 252117 . + . ID=gene-RM672_RS01380;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=RM672_RS01380;old_locus_tag=RM672_01380 NZ_JAVRJS010000001.1 Protein Homology CDS 250828 252117 . + 0 ID=cds-WP_311539708.1;Parent=gene-RM672_RS01380;Dbxref=GenBank:WP_311539708.1;Name=WP_311539708.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=RM672_RS01380;product=GTPase ObgE;protein_id=WP_311539708.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 252133 252576 . + . ID=gene-RM672_RS01385;Name=RM672_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01385;old_locus_tag=RM672_01385 NZ_JAVRJS010000001.1 Protein Homology CDS 252133 252576 . + 0 ID=cds-WP_037574227.1;Parent=gene-RM672_RS01385;Dbxref=GenBank:WP_037574227.1;Name=WP_037574227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=RM672_RS01385;product=ACT domain-containing protein;protein_id=WP_037574227.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 252589 253191 . + . ID=gene-RM672_RS01390;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=RM672_RS01390;old_locus_tag=RM672_01390 NZ_JAVRJS010000001.1 Protein Homology CDS 252589 253191 . + 0 ID=cds-WP_105965414.1;Parent=gene-RM672_RS01390;Dbxref=GenBank:WP_105965414.1;Name=WP_105965414.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=RM672_RS01390;product=Holliday junction branch migration protein RuvA;protein_id=WP_105965414.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 253205 254200 . + . ID=gene-RM672_RS01395;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=RM672_RS01395;old_locus_tag=RM672_01395 NZ_JAVRJS010000001.1 Protein Homology CDS 253205 254200 . + 0 ID=cds-WP_375712398.1;Parent=gene-RM672_RS01395;Dbxref=GenBank:WP_375712398.1;Name=WP_375712398.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=RM672_RS01395;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_375712398.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 254218 255243 . + . ID=gene-RM672_RS01400;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=RM672_RS01400;old_locus_tag=RM672_01400 NZ_JAVRJS010000001.1 Protein Homology CDS 254218 255243 . + 0 ID=cds-WP_311541266.1;Parent=gene-RM672_RS01400;Dbxref=GenBank:WP_311541266.1;Name=WP_311541266.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=RM672_RS01400;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_311541266.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 255262 256401 . + . ID=gene-RM672_RS01405;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=RM672_RS01405;old_locus_tag=RM672_01405 NZ_JAVRJS010000001.1 Protein Homology CDS 255262 256401 . + 0 ID=cds-WP_107366201.1;Parent=gene-RM672_RS01405;Dbxref=GenBank:WP_107366201.1;Name=WP_107366201.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=RM672_RS01405;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_107366201.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 256417 256680 . + . ID=gene-RM672_RS01410;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=RM672_RS01410;old_locus_tag=RM672_01410 NZ_JAVRJS010000001.1 Protein Homology CDS 256417 256680 . + 0 ID=cds-WP_037574211.1;Parent=gene-RM672_RS01410;Dbxref=GenBank:WP_037574211.1;Name=WP_037574211.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=RM672_RS01410;product=preprotein translocase subunit YajC;protein_id=WP_037574211.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 257050 259329 . + . ID=gene-RM672_RS01415;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=RM672_RS01415;old_locus_tag=RM672_01415 NZ_JAVRJS010000001.1 Protein Homology CDS 257050 259329 . + 0 ID=cds-WP_311539706.1;Parent=gene-RM672_RS01415;Dbxref=GenBank:WP_311539706.1;Name=WP_311539706.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804882.1;locus_tag=RM672_RS01415;product=protein translocase subunit SecDF;protein_id=WP_311539706.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 259933 262215 . + . ID=gene-RM672_RS01420;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=RM672_RS01420;old_locus_tag=RM672_01420 NZ_JAVRJS010000001.1 Protein Homology CDS 259933 262215 . + 0 ID=cds-WP_105965419.1;Parent=gene-RM672_RS01420;Dbxref=GenBank:WP_105965419.1;Name=WP_105965419.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613725.1;locus_tag=RM672_RS01420;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_105965419.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 262227 262745 . + . ID=gene-RM672_RS01425;Name=RM672_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01425;old_locus_tag=RM672_01425 NZ_JAVRJS010000001.1 Protein Homology CDS 262227 262745 . + 0 ID=cds-WP_037574204.1;Parent=gene-RM672_RS01425;Dbxref=GenBank:WP_037574204.1;Name=WP_037574204.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=RM672_RS01425;product=adenine phosphoribosyltransferase;protein_id=WP_037574204.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 262922 265111 . + . ID=gene-RM672_RS01430;Name=RM672_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01430;old_locus_tag=RM672_01430 NZ_JAVRJS010000001.1 Protein Homology CDS 262922 265111 . + 0 ID=cds-WP_037574201.1;Parent=gene-RM672_RS01430;Dbxref=GenBank:WP_037574201.1;Name=WP_037574201.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=RM672_RS01430;product=RelA/SpoT family protein;protein_id=WP_037574201.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 265123 265575 . + . ID=gene-RM672_RS01435;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=RM672_RS01435;old_locus_tag=RM672_01435 NZ_JAVRJS010000001.1 Protein Homology CDS 265123 265575 . + 0 ID=cds-WP_037574198.1;Parent=gene-RM672_RS01435;Dbxref=GenBank:WP_037574198.1;Name=WP_037574198.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275586.1;locus_tag=RM672_RS01435;product=D-aminoacyl-tRNA deacylase;protein_id=WP_037574198.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 265572 266447 . + . ID=gene-RM672_RS01440;Name=RM672_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01440;old_locus_tag=RM672_01440 NZ_JAVRJS010000001.1 Protein Homology CDS 265572 266447 . + 0 ID=cds-WP_311539704.1;Parent=gene-RM672_RS01440;Dbxref=GenBank:WP_311539704.1;Name=WP_311539704.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165151.1;locus_tag=RM672_RS01440;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_311539704.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 266778 268049 . + . ID=gene-RM672_RS01445;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=RM672_RS01445;old_locus_tag=RM672_01445 NZ_JAVRJS010000001.1 Protein Homology CDS 266778 268049 . + 0 ID=cds-WP_105965421.1;Parent=gene-RM672_RS01445;Dbxref=GenBank:WP_105965421.1;Name=WP_105965421.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=RM672_RS01445;product=histidine--tRNA ligase;protein_id=WP_105965421.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 268049 269815 . + . ID=gene-RM672_RS01450;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=RM672_RS01450;old_locus_tag=RM672_01450 NZ_JAVRJS010000001.1 Protein Homology CDS 268049 269815 . + 0 ID=cds-WP_107388076.1;Parent=gene-RM672_RS01450;Dbxref=GenBank:WP_107388076.1;Name=WP_107388076.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=RM672_RS01450;product=aspartate--tRNA ligase;protein_id=WP_107388076.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 269868 270059 . + . ID=gene-RM672_RS01455;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=RM672_RS01455;old_locus_tag=RM672_01455 NZ_JAVRJS010000001.1 cmsearch ncRNA 269868 270059 . + . ID=rna-RM672_RS01455;Parent=gene-RM672_RS01455;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS01455;product=6S RNA NZ_JAVRJS010000001.1 cmsearch exon 269868 270059 . + . ID=exon-RM672_RS01455-1;Parent=rna-RM672_RS01455;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS01455;product=6S RNA NZ_JAVRJS010000001.1 RefSeq gene 270123 270890 . + . ID=gene-RM672_RS01460;Name=RM672_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01460;old_locus_tag=RM672_01460 NZ_JAVRJS010000001.1 Protein Homology CDS 270123 270890 . + 0 ID=cds-WP_037574186.1;Parent=gene-RM672_RS01460;Dbxref=GenBank:WP_037574186.1;Name=WP_037574186.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=RM672_RS01460;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_037574186.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 270939 272198 . - . ID=gene-RM672_RS01465;Name=RM672_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01465;old_locus_tag=RM672_01465 NZ_JAVRJS010000001.1 Protein Homology CDS 270939 272198 . - 0 ID=cds-WP_107388078.1;Parent=gene-RM672_RS01465;Dbxref=GenBank:WP_107388078.1;Name=WP_107388078.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453388.1;locus_tag=RM672_RS01465;product=replication-associated recombination protein A;protein_id=WP_107388078.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 272342 272761 . + . ID=gene-RM672_RS01470;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=RM672_RS01470;old_locus_tag=RM672_01470 NZ_JAVRJS010000001.1 Protein Homology CDS 272342 272761 . + 0 ID=cds-WP_037574180.1;Parent=gene-RM672_RS01470;Dbxref=GenBank:WP_037574180.1;Name=WP_037574180.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=RM672_RS01470;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_037574180.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 272832 273662 . + . ID=gene-RM672_RS01475;Name=RM672_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01475;old_locus_tag=RM672_01475 NZ_JAVRJS010000001.1 Protein Homology CDS 272832 273662 . + 0 ID=cds-WP_103159040.1;Parent=gene-RM672_RS01475;Dbxref=GenBank:WP_103159040.1;Name=WP_103159040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=RM672_RS01475;product=aldo/keto reductase;protein_id=WP_103159040.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 273756 273911 . + . ID=gene-RM672_RS01480;Name=RM672_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01480;old_locus_tag=RM672_01480 NZ_JAVRJS010000001.1 Protein Homology CDS 273756 273911 . + 0 ID=cds-WP_165806095.1;Parent=gene-RM672_RS01480;Dbxref=GenBank:WP_165806095.1;Name=WP_165806095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165159.1;locus_tag=RM672_RS01480;product=hypothetical protein;protein_id=WP_165806095.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 273956 274969 . - . ID=gene-RM672_RS01485;Name=RM672_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01485;old_locus_tag=RM672_01485 NZ_JAVRJS010000001.1 Protein Homology CDS 273956 274969 . - 0 ID=cds-WP_037574175.1;Parent=gene-RM672_RS01485;Dbxref=GenBank:WP_037574175.1;Name=WP_037574175.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425255.1;locus_tag=RM672_RS01485;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037574175.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 275189 276337 . + . ID=gene-RM672_RS01490;Name=RM672_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01490;old_locus_tag=RM672_01490 NZ_JAVRJS010000001.1 Protein Homology CDS 275189 276337 . + 0 ID=cds-WP_037574172.1;Parent=gene-RM672_RS01490;Dbxref=GenBank:WP_037574172.1;Name=WP_037574172.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471009.1;locus_tag=RM672_RS01490;product=cysteine desulfurase family protein;protein_id=WP_037574172.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 276334 277446 . + . ID=gene-RM672_RS01495;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=RM672_RS01495;old_locus_tag=RM672_01495 NZ_JAVRJS010000001.1 Protein Homology CDS 276334 277446 . + 0 ID=cds-WP_107371701.1;Parent=gene-RM672_RS01495;Dbxref=GenBank:WP_107371701.1;Name=WP_107371701.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=RM672_RS01495;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_107371701.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 277469 278143 . + . ID=gene-RM672_RS01500;Name=RM672_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01500;old_locus_tag=RM672_01500 NZ_JAVRJS010000001.1 Protein Homology CDS 277469 278143 . + 0 ID=cds-WP_103159036.1;Parent=gene-RM672_RS01500;Dbxref=GenBank:WP_103159036.1;Name=WP_103159036.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=RM672_RS01500;product=tetratricopeptide repeat protein;protein_id=WP_103159036.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 278146 280527 . + . ID=gene-RM672_RS01505;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=RM672_RS01505;old_locus_tag=RM672_01505 NZ_JAVRJS010000001.1 Protein Homology CDS 278146 280527 . + 0 ID=cds-WP_311539179.1;Parent=gene-RM672_RS01505;Dbxref=GenBank:WP_311539179.1;Name=WP_311539179.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176477.1;locus_tag=RM672_RS01505;product=SF1B family DNA helicase RecD2;protein_id=WP_311539179.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 280753 283383 . + . ID=gene-RM672_RS01510;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=RM672_RS01510;old_locus_tag=RM672_01510 NZ_JAVRJS010000001.1 Protein Homology CDS 280753 283383 . + 0 ID=cds-WP_107378379.1;Parent=gene-RM672_RS01510;Dbxref=GenBank:WP_107378379.1;Name=WP_107378379.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=RM672_RS01510;product=alanine--tRNA ligase;protein_id=WP_107378379.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 283445 283717 . + . ID=gene-RM672_RS01515;Name=RM672_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01515;old_locus_tag=RM672_01515 NZ_JAVRJS010000001.1 Protein Homology CDS 283445 283717 . + 0 ID=cds-WP_037574156.1;Parent=gene-RM672_RS01515;Dbxref=GenBank:WP_037574156.1;Name=WP_037574156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=RM672_RS01515;product=IreB family regulatory phosphoprotein;protein_id=WP_037574156.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 283710 284138 . + . ID=gene-RM672_RS01520;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=RM672_RS01520;old_locus_tag=RM672_01520 NZ_JAVRJS010000001.1 Protein Homology CDS 283710 284138 . + 0 ID=cds-WP_037574153.1;Parent=gene-RM672_RS01520;Dbxref=GenBank:WP_037574153.1;Name=WP_037574153.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=RM672_RS01520;product=Holliday junction resolvase RuvX;protein_id=WP_037574153.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 284153 284467 . + . ID=gene-RM672_RS01525;Name=RM672_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01525;old_locus_tag=RM672_01525 NZ_JAVRJS010000001.1 Protein Homology CDS 284153 284467 . + 0 ID=cds-WP_311539702.1;Parent=gene-RM672_RS01525;Dbxref=GenBank:WP_311539702.1;Name=WP_311539702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=RM672_RS01525;product=DUF1292 domain-containing protein;protein_id=WP_311539702.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 284848 285492 . + . ID=gene-RM672_RS01530;Name=RM672_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01530;old_locus_tag=RM672_01530 NZ_JAVRJS010000001.1 Protein Homology CDS 284848 285492 . + 0 ID=cds-WP_311539701.1;Parent=gene-RM672_RS01530;Dbxref=GenBank:WP_311539701.1;Name=WP_311539701.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=RM672_RS01530;product=O-methyltransferase;protein_id=WP_311539701.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 285485 286414 . + . ID=gene-RM672_RS01535;Name=RM672_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01535;old_locus_tag=RM672_01535 NZ_JAVRJS010000001.1 Protein Homology CDS 285485 286414 . + 0 ID=cds-WP_105965427.1;Parent=gene-RM672_RS01535;Dbxref=GenBank:WP_105965427.1;Name=WP_105965427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=RM672_RS01535;product=peptidase U32 family protein;protein_id=WP_105965427.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 286452 287717 . + . ID=gene-RM672_RS01540;Name=RM672_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01540;old_locus_tag=RM672_01540 NZ_JAVRJS010000001.1 Protein Homology CDS 286452 287717 . + 0 ID=cds-WP_037574139.1;Parent=gene-RM672_RS01540;Dbxref=GenBank:WP_037574139.1;Name=WP_037574139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471048.1;locus_tag=RM672_RS01540;product=peptidase U32 family protein;protein_id=WP_037574139.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 287721 288347 . + . ID=gene-RM672_RS01545;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=RM672_RS01545;old_locus_tag=RM672_01545 NZ_JAVRJS010000001.1 Protein Homology CDS 287721 288347 . + 0 ID=cds-WP_037574136.1;Parent=gene-RM672_RS01545;Dbxref=GenBank:WP_037574136.1;Name=WP_037574136.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458952.1;locus_tag=RM672_RS01545;product=uridine kinase;protein_id=WP_037574136.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 288374 288850 . + . ID=gene-RM672_RS01550;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=RM672_RS01550;old_locus_tag=RM672_01550 NZ_JAVRJS010000001.1 Protein Homology CDS 288374 288850 . + 0 ID=cds-WP_311539700.1;Parent=gene-RM672_RS01550;Dbxref=GenBank:WP_311539700.1;Name=WP_311539700.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=RM672_RS01550;product=transcription elongation factor GreA;protein_id=WP_311539700.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 289088 289819 . + . ID=gene-RM672_RS01555;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=RM672_RS01555;old_locus_tag=RM672_01555 NZ_JAVRJS010000001.1 Protein Homology CDS 289088 289819 . + 0 ID=cds-WP_037574130.1;Parent=gene-RM672_RS01555;Dbxref=GenBank:WP_037574130.1;Name=WP_037574130.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=RM672_RS01555;product=5-oxoprolinase subunit PxpB;protein_id=WP_037574130.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 289809 290834 . + . ID=gene-RM672_RS01560;Name=RM672_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01560;old_locus_tag=RM672_01560 NZ_JAVRJS010000001.1 Protein Homology CDS 289809 290834 . + 0 ID=cds-WP_311539699.1;Parent=gene-RM672_RS01560;Dbxref=GenBank:WP_311539699.1;Name=WP_311539699.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=RM672_RS01560;product=5-oxoprolinase subunit C family protein;protein_id=WP_311539699.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 290825 291271 . + . ID=gene-RM672_RS01565;Name=RM672_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01565;old_locus_tag=RM672_01565 NZ_JAVRJS010000001.1 Protein Homology CDS 290825 291271 . + 0 ID=cds-WP_103159032.1;Parent=gene-RM672_RS01565;Dbxref=GenBank:WP_103159032.1;Name=WP_103159032.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425239.1;locus_tag=RM672_RS01565;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_103159032.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 291283 292647 . + . ID=gene-RM672_RS01570;Name=RM672_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01570;old_locus_tag=RM672_01570 NZ_JAVRJS010000001.1 Protein Homology CDS 291283 292647 . + 0 ID=cds-WP_311539698.1;Parent=gene-RM672_RS01570;Dbxref=GenBank:WP_311539698.1;Name=WP_311539698.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=RM672_RS01570;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_311539698.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 292640 293401 . + . ID=gene-RM672_RS01575;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=RM672_RS01575;old_locus_tag=RM672_01575 NZ_JAVRJS010000001.1 Protein Homology CDS 292640 293401 . + 0 ID=cds-WP_037574117.1;Parent=gene-RM672_RS01575;Dbxref=GenBank:WP_037574117.1;Name=WP_037574117.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382620.1;locus_tag=RM672_RS01575;product=5-oxoprolinase subunit PxpA;protein_id=WP_037574117.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 293405 294643 . + . ID=gene-RM672_RS01580;Name=RM672_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01580;old_locus_tag=RM672_01580 NZ_JAVRJS010000001.1 Protein Homology CDS 293405 294643 . + 0 ID=cds-WP_037574114.1;Parent=gene-RM672_RS01580;Dbxref=GenBank:WP_037574114.1;Name=WP_037574114.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165175.1;locus_tag=RM672_RS01580;product=NRAMP family divalent metal transporter;protein_id=WP_037574114.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 294928 295620 . + . ID=gene-RM672_RS01585;Name=RM672_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01585;old_locus_tag=RM672_01585 NZ_JAVRJS010000001.1 Protein Homology CDS 294928 295620 . + 0 ID=cds-WP_037574111.1;Parent=gene-RM672_RS01585;Dbxref=GenBank:WP_037574111.1;Name=WP_037574111.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471057.1;locus_tag=RM672_RS01585;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_037574111.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 295687 296217 . + . ID=gene-RM672_RS01590;Name=RM672_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01590;old_locus_tag=RM672_01590 NZ_JAVRJS010000001.1 Protein Homology CDS 295687 296217 . + 0 ID=cds-WP_037574108.1;Parent=gene-RM672_RS01590;Dbxref=GenBank:WP_037574108.1;Name=WP_037574108.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=RM672_RS01590;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_037574108.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 296214 297314 . + . ID=gene-RM672_RS01595;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=RM672_RS01595;old_locus_tag=RM672_01595 NZ_JAVRJS010000001.1 Protein Homology CDS 296214 297314 . + 0 ID=cds-WP_105965433.1;Parent=gene-RM672_RS01595;Dbxref=GenBank:WP_105965433.1;Name=WP_105965433.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500210.1;locus_tag=RM672_RS01595;product=ribosome biogenesis GTPase YqeH;protein_id=WP_105965433.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 297328 298140 . + . ID=gene-RM672_RS01600;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=RM672_RS01600;old_locus_tag=RM672_01600 NZ_JAVRJS010000001.1 Protein Homology CDS 297328 298140 . + 0 ID=cds-WP_105965434.1;Parent=gene-RM672_RS01600;Dbxref=GenBank:WP_105965434.1;Name=WP_105965434.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425232.1;locus_tag=RM672_RS01600;product=shikimate dehydrogenase;protein_id=WP_105965434.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 298150 298446 . + . ID=gene-RM672_RS01605;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=RM672_RS01605;old_locus_tag=RM672_01605 NZ_JAVRJS010000001.1 Protein Homology CDS 298150 298446 . + 0 ID=cds-WP_037574099.1;Parent=gene-RM672_RS01605;Dbxref=GenBank:WP_037574099.1;Name=WP_037574099.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440113.1;locus_tag=RM672_RS01605;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_037574099.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 298446 299012 . + . ID=gene-RM672_RS01610;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=RM672_RS01610;old_locus_tag=RM672_01610 NZ_JAVRJS010000001.1 Protein Homology CDS 298446 299012 . + 0 ID=cds-WP_037574096.1;Parent=gene-RM672_RS01610;Dbxref=GenBank:WP_037574096.1;Name=WP_037574096.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=RM672_RS01610;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_037574096.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 299005 299577 . + . ID=gene-RM672_RS01615;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=RM672_RS01615;old_locus_tag=RM672_01615 NZ_JAVRJS010000001.1 Protein Homology CDS 299005 299577 . + 0 ID=cds-WP_037574093.1;Parent=gene-RM672_RS01615;Dbxref=GenBank:WP_037574093.1;Name=WP_037574093.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369462.1;locus_tag=RM672_RS01615;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_037574093.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 299590 299946 . + . ID=gene-RM672_RS01620;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=RM672_RS01620;old_locus_tag=RM672_01620 NZ_JAVRJS010000001.1 Protein Homology CDS 299590 299946 . + 0 ID=cds-WP_103158624.1;Parent=gene-RM672_RS01620;Dbxref=GenBank:WP_103158624.1;Name=WP_103158624.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=RM672_RS01620;product=ribosome silencing factor;protein_id=WP_103158624.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 299946 300668 . + . ID=gene-RM672_RS01625;Name=RM672_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01625;old_locus_tag=RM672_01625 NZ_JAVRJS010000001.1 Protein Homology CDS 299946 300668 . + 0 ID=cds-WP_182470768.1;Parent=gene-RM672_RS01625;Dbxref=GenBank:WP_182470768.1;Name=WP_182470768.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=RM672_RS01625;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_182470768.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 300717 301355 . + . ID=gene-RM672_RS01630;Name=RM672_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01630;old_locus_tag=RM672_01630 NZ_JAVRJS010000001.1 Protein Homology CDS 300717 301355 . + 0 ID=cds-WP_311539696.1;Parent=gene-RM672_RS01630;Dbxref=GenBank:WP_311539696.1;Name=WP_311539696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382608.1;locus_tag=RM672_RS01630;product=helix-hairpin-helix domain-containing protein;protein_id=WP_311539696.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 301438 301899 . + . ID=gene-RM672_RS01635;Name=RM672_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01635;old_locus_tag=RM672_01635 NZ_JAVRJS010000001.1 Protein Homology CDS 301438 301899 . + 0 ID=cds-WP_037574083.1;Parent=gene-RM672_RS01635;Dbxref=GenBank:WP_037574083.1;Name=WP_037574083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458970.1;locus_tag=RM672_RS01635;product=ComE operon protein 2;protein_id=WP_037574083.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 302032 303969 . + . ID=gene-RM672_RS01640;Name=RM672_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01640;old_locus_tag=RM672_01640 NZ_JAVRJS010000001.1 Protein Homology CDS 302032 303969 . + 0 ID=cds-WP_311539695.1;Parent=gene-RM672_RS01640;Dbxref=GenBank:WP_311539695.1;Name=WP_311539695.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=RM672_RS01640;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_311539695.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 304221 305198 . + . ID=gene-RM672_RS01645;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=RM672_RS01645;old_locus_tag=RM672_01645 NZ_JAVRJS010000001.1 Protein Homology CDS 304221 305198 . + 0 ID=cds-WP_311539694.1;Parent=gene-RM672_RS01645;Dbxref=GenBank:WP_311539694.1;Name=WP_311539694.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836898.1;locus_tag=RM672_RS01645;product=DNA polymerase III subunit delta;protein_id=WP_311539694.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 305225 305473 . - . ID=gene-RM672_RS01650;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=RM672_RS01650;old_locus_tag=RM672_01650 NZ_JAVRJS010000001.1 Protein Homology CDS 305225 305473 . - 0 ID=cds-WP_037574074.1;Parent=gene-RM672_RS01650;Dbxref=GenBank:WP_037574074.1;Name=WP_037574074.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=RM672_RS01650;product=30S ribosomal protein S20;protein_id=WP_037574074.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 305715 307538 . + . ID=gene-RM672_RS01655;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=RM672_RS01655;old_locus_tag=RM672_01655 NZ_JAVRJS010000001.1 Protein Homology CDS 305715 307538 . + 0 ID=cds-WP_037574071.1;Parent=gene-RM672_RS01655;Dbxref=GenBank:WP_037574071.1;Name=WP_037574071.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=RM672_RS01655;product=translation elongation factor 4;protein_id=WP_037574071.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 307600 308721 . + . ID=gene-RM672_RS01660;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=RM672_RS01660;old_locus_tag=RM672_01660 NZ_JAVRJS010000001.1 Protein Homology CDS 307600 308721 . + 0 ID=cds-WP_119512899.1;Parent=gene-RM672_RS01660;Dbxref=GenBank:WP_119512899.1;Name=WP_119512899.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=RM672_RS01660;product=radical SAM family heme chaperone HemW;protein_id=WP_119512899.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 308821 309804 . + . ID=gene-RM672_RS01665;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=RM672_RS01665;old_locus_tag=RM672_01665 NZ_JAVRJS010000001.1 Protein Homology CDS 308821 309804 . + 0 ID=cds-WP_311539693.1;Parent=gene-RM672_RS01665;Dbxref=GenBank:WP_311539693.1;Name=WP_311539693.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=RM672_RS01665;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_311539693.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 309843 310448 . + . ID=gene-RM672_RS01670;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=RM672_RS01670;old_locus_tag=RM672_01670 NZ_JAVRJS010000001.1 Protein Homology CDS 309843 310448 . + 0 ID=cds-WP_037574065.1;Parent=gene-RM672_RS01670;Dbxref=GenBank:WP_037574065.1;Name=WP_037574065.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182226.1;locus_tag=RM672_RS01670;product=nucleotide exchange factor GrpE;protein_id=WP_037574065.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 310512 312326 . + . ID=gene-RM672_RS01675;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=RM672_RS01675;old_locus_tag=RM672_01675 NZ_JAVRJS010000001.1 Protein Homology CDS 310512 312326 . + 0 ID=cds-WP_311542447.1;Parent=gene-RM672_RS01675;Dbxref=GenBank:WP_311542447.1;Name=WP_311542447.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500193.1;locus_tag=RM672_RS01675;product=molecular chaperone DnaK;protein_id=WP_311542447.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 312442 313572 . + . ID=gene-RM672_RS01680;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=RM672_RS01680;old_locus_tag=RM672_01680 NZ_JAVRJS010000001.1 Protein Homology CDS 312442 313572 . + 0 ID=cds-WP_107367471.1;Parent=gene-RM672_RS01680;Dbxref=GenBank:WP_107367471.1;Name=WP_107367471.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=RM672_RS01680;product=molecular chaperone DnaJ;protein_id=WP_107367471.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 313576 314505 . + . ID=gene-RM672_RS01685;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=RM672_RS01685;old_locus_tag=RM672_01685 NZ_JAVRJS010000001.1 Protein Homology CDS 313576 314505 . + 0 ID=cds-WP_311539692.1;Parent=gene-RM672_RS01685;Dbxref=GenBank:WP_311539692.1;Name=WP_311539692.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831256.1;locus_tag=RM672_RS01685;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_311539692.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 314511 315260 . + . ID=gene-RM672_RS01690;Name=RM672_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01690;old_locus_tag=RM672_01690 NZ_JAVRJS010000001.1 Protein Homology CDS 314511 315260 . + 0 ID=cds-WP_107363423.1;Parent=gene-RM672_RS01690;Dbxref=GenBank:WP_107363423.1;Name=WP_107363423.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=RM672_RS01690;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_107363423.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 315279 316625 . + . ID=gene-RM672_RS01695;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=RM672_RS01695;old_locus_tag=RM672_01695 NZ_JAVRJS010000001.1 Protein Homology CDS 315279 316625 . + 0 ID=cds-WP_037574053.1;Parent=gene-RM672_RS01695;Dbxref=GenBank:WP_037574053.1;Name=WP_037574053.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=RM672_RS01695;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_037574053.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 316756 316932 . + . ID=gene-RM672_RS01700;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=RM672_RS01700;old_locus_tag=RM672_01700 NZ_JAVRJS010000001.1 Protein Homology CDS 316756 316932 . + 0 ID=cds-WP_002471046.1;Parent=gene-RM672_RS01700;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=RM672_RS01700;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 317144 317833 . + . ID=gene-RM672_RS01705;Name=RM672_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01705;old_locus_tag=RM672_01705 NZ_JAVRJS010000001.1 Protein Homology CDS 317144 317833 . + 0 ID=cds-WP_105965464.1;Parent=gene-RM672_RS01705;Dbxref=GenBank:WP_105965464.1;Name=WP_105965464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500187.1;locus_tag=RM672_RS01705;product=NfeD family protein;protein_id=WP_105965464.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 317846 318844 . + . ID=gene-RM672_RS01710;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=RM672_RS01710;old_locus_tag=RM672_01710 NZ_JAVRJS010000001.1 Protein Homology CDS 317846 318844 . + 0 ID=cds-WP_105965446.1;Parent=gene-RM672_RS01710;Dbxref=GenBank:WP_105965446.1;Name=WP_105965446.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425210.1;locus_tag=RM672_RS01710;product=flotillin-like protein FloA;protein_id=WP_105965446.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 318857 319474 . + . ID=gene-RM672_RS01715;Name=RM672_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01715;old_locus_tag=RM672_01715 NZ_JAVRJS010000001.1 Protein Homology CDS 318857 319474 . + 0 ID=cds-WP_105965447.1;Parent=gene-RM672_RS01715;Dbxref=GenBank:WP_105965447.1;Name=WP_105965447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425209.1;locus_tag=RM672_RS01715;product=hypothetical protein;protein_id=WP_105965447.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 319821 320768 . + . ID=gene-RM672_RS01720;Name=RM672_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01720;old_locus_tag=RM672_01720 NZ_JAVRJS010000001.1 Protein Homology CDS 319821 320768 . + 0 ID=cds-WP_037574043.1;Parent=gene-RM672_RS01720;Dbxref=GenBank:WP_037574043.1;Name=WP_037574043.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500184.1;locus_tag=RM672_RS01720;product=PhoH family protein;protein_id=WP_037574043.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 320768 321232 . + . ID=gene-RM672_RS01725;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=RM672_RS01725;old_locus_tag=RM672_01725 NZ_JAVRJS010000001.1 Protein Homology CDS 320768 321232 . + 0 ID=cds-WP_037574040.1;Parent=gene-RM672_RS01725;Dbxref=GenBank:WP_037574040.1;Name=WP_037574040.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510508.1;locus_tag=RM672_RS01725;product=rRNA maturation RNase YbeY;protein_id=WP_037574040.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 321232 321567 . + . ID=gene-RM672_RS01730;Name=RM672_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01730;old_locus_tag=RM672_01730 NZ_JAVRJS010000001.1 Protein Homology CDS 321232 321567 . + 0 ID=cds-WP_275113284.1;Parent=gene-RM672_RS01730;Dbxref=GenBank:WP_275113284.1;Name=WP_275113284.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507479.1;locus_tag=RM672_RS01730;product=diacylglycerol kinase family protein;protein_id=WP_275113284.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 321582 321986 . + . ID=gene-RM672_RS01735;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=RM672_RS01735;old_locus_tag=RM672_01735 NZ_JAVRJS010000001.1 Protein Homology CDS 321582 321986 . + 0 ID=cds-WP_037574034.1;Parent=gene-RM672_RS01735;Dbxref=GenBank:WP_037574034.1;Name=WP_037574034.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500181.1;locus_tag=RM672_RS01735;product=cytidine deaminase;protein_id=WP_037574034.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 321988 322884 . + . ID=gene-RM672_RS01740;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=RM672_RS01740;old_locus_tag=RM672_01740 NZ_JAVRJS010000001.1 Protein Homology CDS 321988 322884 . + 0 ID=cds-WP_105965450.1;Parent=gene-RM672_RS01740;Dbxref=GenBank:WP_105965450.1;Name=WP_105965450.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=RM672_RS01740;product=GTPase Era;protein_id=WP_105965450.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 322907 323680 . + . ID=gene-RM672_RS01745;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=RM672_RS01745;old_locus_tag=RM672_01745 NZ_JAVRJS010000001.1 Protein Homology CDS 322907 323680 . + 0 ID=cds-WP_105965451.1;Parent=gene-RM672_RS01745;Dbxref=GenBank:WP_105965451.1;Name=WP_105965451.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=RM672_RS01745;product=DNA repair protein RecO;protein_id=WP_105965451.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 323770 325161 . - . ID=gene-RM672_RS01750;Name=RM672_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01750;old_locus_tag=RM672_01750 NZ_JAVRJS010000001.1 Protein Homology CDS 323770 325161 . - 0 ID=cds-WP_037574027.1;Parent=gene-RM672_RS01750;Dbxref=GenBank:WP_037574027.1;Name=WP_037574027.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=RM672_RS01750;product=glycine--tRNA ligase;protein_id=WP_037574027.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 325582 326205 . + . ID=gene-RM672_RS01755;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=RM672_RS01755;old_locus_tag=RM672_01755 NZ_JAVRJS010000001.1 Protein Homology CDS 325582 326205 . + 0 ID=cds-WP_103158618.1;Parent=gene-RM672_RS01755;Dbxref=GenBank:WP_103158618.1;Name=WP_103158618.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=RM672_RS01755;product=transcriptional regulator CcpN;protein_id=WP_103158618.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 326221 327045 . + . ID=gene-RM672_RS01760;Name=RM672_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01760;old_locus_tag=RM672_01760 NZ_JAVRJS010000001.1 Protein Homology CDS 326221 327045 . + 0 ID=cds-WP_311540559.1;Parent=gene-RM672_RS01760;Dbxref=GenBank:WP_311540559.1;Name=WP_311540559.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=RM672_RS01760;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_311540559.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 327117 328901 . + . ID=gene-RM672_RS01765;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=RM672_RS01765;old_locus_tag=RM672_01765 NZ_JAVRJS010000001.1 Protein Homology CDS 327117 328901 . + 0 ID=cds-WP_311540560.1;Parent=gene-RM672_RS01765;Dbxref=GenBank:WP_311540560.1;Name=WP_311540560.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900432.1;locus_tag=RM672_RS01765;product=DNA primase;protein_id=WP_311540560.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 328919 330028 . + . ID=gene-RM672_RS01770;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=RM672_RS01770;old_locus_tag=RM672_01770 NZ_JAVRJS010000001.1 Protein Homology CDS 328919 330028 . + 0 ID=cds-WP_019165210.1;Parent=gene-RM672_RS01770;Dbxref=GenBank:WP_019165210.1;Name=WP_019165210.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=RM672_RS01770;product=RNA polymerase sigma factor RpoD;protein_id=WP_019165210.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 330191 330868 . + . ID=gene-RM672_RS01775;Name=RM672_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01775;old_locus_tag=RM672_01775 NZ_JAVRJS010000001.1 Protein Homology CDS 330191 330868 . + 0 ID=cds-WP_105965455.1;Parent=gene-RM672_RS01775;Dbxref=GenBank:WP_105965455.1;Name=WP_105965455.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=RM672_RS01775;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_105965455.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 330865 331965 . + . ID=gene-RM672_RS01780;Name=RM672_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01780;old_locus_tag=RM672_01780 NZ_JAVRJS010000001.1 Protein Homology CDS 330865 331965 . + 0 ID=cds-WP_107363428.1;Parent=gene-RM672_RS01780;Dbxref=GenBank:WP_107363428.1;Name=WP_107363428.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472473.1;locus_tag=RM672_RS01780;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_107363428.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 332110 333078 . - . ID=gene-RM672_RS01785;Name=RM672_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01785;old_locus_tag=RM672_01785 NZ_JAVRJS010000001.1 Protein Homology CDS 332110 333078 . - 0 ID=cds-WP_037574009.1;Parent=gene-RM672_RS01785;Dbxref=GenBank:WP_037574009.1;Name=WP_037574009.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=RM672_RS01785;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_037574009.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 333265 334605 . + . ID=gene-RM672_RS01790;Name=RM672_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01790;old_locus_tag=RM672_01790 NZ_JAVRJS010000001.1 Protein Homology CDS 333265 334605 . + 0 ID=cds-WP_105965457.1;Parent=gene-RM672_RS01790;Dbxref=GenBank:WP_105965457.1;Name=WP_105965457.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425193.1;locus_tag=RM672_RS01790;product=DEAD/DEAH box helicase;protein_id=WP_105965457.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 334619 335509 . + . ID=gene-RM672_RS01795;Name=RM672_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01795;old_locus_tag=RM672_01795 NZ_JAVRJS010000001.1 Protein Homology CDS 334619 335509 . + 0 ID=cds-WP_103158625.1;Parent=gene-RM672_RS01795;Dbxref=GenBank:WP_103158625.1;Name=WP_103158625.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425192.1;locus_tag=RM672_RS01795;product=deoxyribonuclease IV;protein_id=WP_103158625.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 335647 336417 . + . ID=gene-RM672_RS01800;Name=RM672_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01800;old_locus_tag=RM672_01800 NZ_JAVRJS010000001.1 Protein Homology CDS 335647 336417 . + 0 ID=cds-WP_105965458.1;Parent=gene-RM672_RS01800;Dbxref=GenBank:WP_105965458.1;Name=WP_105965458.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455284.1;locus_tag=RM672_RS01800;product=metal ABC transporter ATP-binding protein;protein_id=WP_105965458.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 336414 337265 . + . ID=gene-RM672_RS01805;Name=RM672_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01805;old_locus_tag=RM672_01805 NZ_JAVRJS010000001.1 Protein Homology CDS 336414 337265 . + 0 ID=cds-WP_311541269.1;Parent=gene-RM672_RS01805;Dbxref=GenBank:WP_311541269.1;Name=WP_311541269.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507493.1;locus_tag=RM672_RS01805;product=metal ABC transporter permease;protein_id=WP_311541269.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 337266 337676 . + . ID=gene-RM672_RS01810;Name=RM672_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01810;old_locus_tag=RM672_01810 NZ_JAVRJS010000001.1 Protein Homology CDS 337266 337676 . + 0 ID=cds-WP_037573998.1;Parent=gene-RM672_RS01810;Dbxref=GenBank:WP_037573998.1;Name=WP_037573998.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500166.1;locus_tag=RM672_RS01810;product=Fur family transcriptional regulator;protein_id=WP_037573998.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 337708 338808 . - . ID=gene-RM672_RS01815;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=RM672_RS01815;old_locus_tag=RM672_01815 NZ_JAVRJS010000001.1 Protein Homology CDS 337708 338808 . - 0 ID=cds-WP_107398558.1;Parent=gene-RM672_RS01815;Dbxref=GenBank:WP_107398558.1;Name=WP_107398558.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425188.1;locus_tag=RM672_RS01815;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_107398558.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 339138 339737 . + . ID=gene-RM672_RS01820;Name=RM672_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01820;old_locus_tag=RM672_01820 NZ_JAVRJS010000001.1 Protein Homology CDS 339138 339737 . + 0 ID=cds-WP_037573937.1;Parent=gene-RM672_RS01820;Dbxref=GenBank:WP_037573937.1;Name=WP_037573937.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=RM672_RS01820;product=superoxide dismutase;protein_id=WP_037573937.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 339963 341999 . + . ID=gene-RM672_RS01825;Name=RM672_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01825;old_locus_tag=RM672_01825 NZ_JAVRJS010000001.1 Protein Homology CDS 339963 341999 . + 0 ID=cds-WP_105965330.1;Parent=gene-RM672_RS01825;Dbxref=GenBank:WP_105965330.1;Name=WP_105965330.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425186.1;locus_tag=RM672_RS01825;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_105965330.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 342270 343241 . + . ID=gene-RM672_RS01830;Name=RM672_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01830;old_locus_tag=RM672_01830 NZ_JAVRJS010000001.1 Protein Homology CDS 342270 343241 . + 0 ID=cds-WP_268216594.1;Parent=gene-RM672_RS01830;Dbxref=GenBank:WP_268216594.1;Name=WP_268216594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425185.1;locus_tag=RM672_RS01830;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_268216594.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 343324 344250 . + . ID=gene-RM672_RS01835;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=RM672_RS01835;old_locus_tag=RM672_01835 NZ_JAVRJS010000001.1 Protein Homology CDS 343324 344250 . + 0 ID=cds-WP_105965329.1;Parent=gene-RM672_RS01835;Dbxref=GenBank:WP_105965329.1;Name=WP_105965329.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453209.1;locus_tag=RM672_RS01835;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_105965329.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 344252 345130 . + . ID=gene-RM672_RS01840;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=RM672_RS01840;old_locus_tag=RM672_01840 NZ_JAVRJS010000001.1 Protein Homology CDS 344252 345130 . + 0 ID=cds-WP_107366148.1;Parent=gene-RM672_RS01840;Dbxref=GenBank:WP_107366148.1;Name=WP_107366148.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168690.1;locus_tag=RM672_RS01840;product=phosphate ABC transporter permease PstA;protein_id=WP_107366148.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 345164 346036 . + . ID=gene-RM672_RS01845;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=RM672_RS01845;old_locus_tag=RM672_01845 NZ_JAVRJS010000001.1 Protein Homology CDS 345164 346036 . + 0 ID=cds-WP_311541270.1;Parent=gene-RM672_RS01845;Dbxref=GenBank:WP_311541270.1;Name=WP_311541270.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165224.1;locus_tag=RM672_RS01845;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_311541270.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 346041 346688 . + . ID=gene-RM672_RS01850;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=RM672_RS01850;old_locus_tag=RM672_01850 NZ_JAVRJS010000001.1 Protein Homology CDS 346041 346688 . + 0 ID=cds-WP_037573922.1;Parent=gene-RM672_RS01850;Dbxref=GenBank:WP_037573922.1;Name=WP_037573922.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468770.1;locus_tag=RM672_RS01850;product=phosphate signaling complex protein PhoU;protein_id=WP_037573922.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 346744 346908 . + . ID=gene-RM672_RS01855;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM672_RS01855;old_locus_tag=RM672_01855 NZ_JAVRJS010000001.1 Protein Homology CDS 346744 346908 . + 0 ID=cds-WP_255201399.1;Parent=gene-RM672_RS01855;Dbxref=GenBank:WP_255201399.1;Name=WP_255201399.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM672_RS01855;product=50S ribosomal protein L33;protein_id=WP_255201399.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 347104 347643 . + . ID=gene-RM672_RS01860;Name=RM672_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01860;old_locus_tag=RM672_01860 NZ_JAVRJS010000001.1 Protein Homology CDS 347104 347643 . + 0 ID=cds-WP_037573917.1;Parent=gene-RM672_RS01860;Dbxref=GenBank:WP_037573917.1;Name=WP_037573917.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382545.1;locus_tag=RM672_RS01860;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_037573917.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 347661 349100 . + . ID=gene-RM672_RS01865;Name=RM672_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01865;old_locus_tag=RM672_01865 NZ_JAVRJS010000001.1 Protein Homology CDS 347661 349100 . + 0 ID=cds-WP_107366149.1;Parent=gene-RM672_RS01865;Dbxref=GenBank:WP_107366149.1;Name=WP_107366149.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=RM672_RS01865;product=rhomboid family intramembrane serine protease;protein_id=WP_107366149.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 349102 349305 . + . ID=gene-RM672_RS01870;Name=RM672_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01870;old_locus_tag=RM672_01870 NZ_JAVRJS010000001.1 Protein Homology CDS 349102 349305 . + 0 ID=cds-WP_037573910.1;Parent=gene-RM672_RS01870;Dbxref=GenBank:WP_037573910.1;Name=WP_037573910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=RM672_RS01870;product=YqgQ family protein;protein_id=WP_037573910.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 349302 350288 . + . ID=gene-RM672_RS01875;Name=RM672_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01875;old_locus_tag=RM672_01875 NZ_JAVRJS010000001.1 Protein Homology CDS 349302 350288 . + 0 ID=cds-WP_037573907.1;Parent=gene-RM672_RS01875;Dbxref=GenBank:WP_037573907.1;Name=WP_037573907.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=RM672_RS01875;product=ROK family glucokinase;protein_id=WP_037573907.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 350289 350600 . + . ID=gene-RM672_RS01880;Name=RM672_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01880;old_locus_tag=RM672_01880 NZ_JAVRJS010000001.1 Protein Homology CDS 350289 350600 . + 0 ID=cds-WP_037573905.1;Parent=gene-RM672_RS01880;Dbxref=GenBank:WP_037573905.1;Name=WP_037573905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433945.1;locus_tag=RM672_RS01880;product=MTH1187 family thiamine-binding protein;protein_id=WP_037573905.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 350614 351237 . + . ID=gene-RM672_RS01885;Name=RM672_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01885;old_locus_tag=RM672_01885 NZ_JAVRJS010000001.1 Protein Homology CDS 350614 351237 . + 0 ID=cds-WP_107367477.1;Parent=gene-RM672_RS01885;Dbxref=GenBank:WP_107367477.1;Name=WP_107367477.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558017.1;locus_tag=RM672_RS01885;product=MBL fold metallo-hydrolase;protein_id=WP_107367477.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 351290 352264 . + . ID=gene-RM672_RS01890;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=RM672_RS01890;old_locus_tag=RM672_01890 NZ_JAVRJS010000001.1 Protein Homology CDS 351290 352264 . + 0 ID=cds-WP_107367476.1;Parent=gene-RM672_RS01890;Dbxref=GenBank:WP_107367476.1;Name=WP_107367476.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=RM672_RS01890;product=competence type IV pilus ATPase ComGA;protein_id=WP_107367476.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 352233 353300 . + . ID=gene-RM672_RS01895;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=RM672_RS01895;old_locus_tag=RM672_01895 NZ_JAVRJS010000001.1 Protein Homology CDS 352233 353300 . + 0 ID=cds-WP_105965327.1;Parent=gene-RM672_RS01895;Dbxref=GenBank:WP_105965327.1;Name=WP_105965327.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=RM672_RS01895;product=competence type IV pilus assembly protein ComGB;protein_id=WP_105965327.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 353315 353632 . + . ID=gene-RM672_RS01900;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=RM672_RS01900;old_locus_tag=RM672_01900 NZ_JAVRJS010000001.1 Protein Homology CDS 353315 353632 . + 0 ID=cds-WP_037573894.1;Parent=gene-RM672_RS01900;Dbxref=GenBank:WP_037573894.1;Name=WP_037573894.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464660.1;locus_tag=RM672_RS01900;product=competence type IV pilus major pilin ComGC;protein_id=WP_037573894.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 353622 354053 . + . ID=gene-RM672_RS01905;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=RM672_RS01905;old_locus_tag=RM672_01905 NZ_JAVRJS010000001.1 Protein Homology CDS 353622 354053 . + 0 ID=cds-WP_051604961.1;Parent=gene-RM672_RS01905;Dbxref=GenBank:WP_051604961.1;Name=WP_051604961.1;gbkey=CDS;gene=comGD;inference=COORDINATES: protein motif:HMM:NF040982.1;locus_tag=RM672_RS01905;product=competence type IV pilus minor pilin ComGD;protein_id=WP_051604961.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 354158 354340 . + . ID=gene-RM672_RS01910;Name=RM672_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01910;old_locus_tag=RM672_01910 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 354158 354340 . + 0 ID=cds-WP_133172104.1;Parent=gene-RM672_RS01910;Dbxref=GenBank:WP_133172104.1;Name=WP_133172104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS01910;product=hypothetical protein;protein_id=WP_133172104.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 354357 354731 . + . ID=gene-RM672_RS01915;Name=RM672_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01915;old_locus_tag=RM672_01915 NZ_JAVRJS010000001.1 Protein Homology CDS 354357 354731 . + 0 ID=cds-WP_107374195.1;Parent=gene-RM672_RS01915;Dbxref=GenBank:WP_107374195.1;Name=WP_107374195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027310.7;locus_tag=RM672_RS01915;product=competence type IV pilus minor pilin ComGF;protein_id=WP_107374195.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 354896 355420 . + . ID=gene-RM672_RS01920;Name=RM672_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01920;old_locus_tag=RM672_01920 NZ_JAVRJS010000001.1 Protein Homology CDS 354896 355420 . + 0 ID=cds-WP_107366153.1;Parent=gene-RM672_RS01920;Dbxref=GenBank:WP_107366153.1;Name=WP_107366153.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469341.1;locus_tag=RM672_RS01920;product=shikimate kinase;protein_id=WP_107366153.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch riboswitch 355407 355500 . + . ID=id-NZ_JAVRJS010000001.1:355407..355500;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00504,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000001.1 RefSeq gene 355573 356664 . + . ID=gene-RM672_RS01925;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=RM672_RS01925;old_locus_tag=RM672_01925 NZ_JAVRJS010000001.1 Protein Homology CDS 355573 356664 . + 0 ID=cds-WP_105965325.1;Parent=gene-RM672_RS01925;Dbxref=GenBank:WP_105965325.1;Name=WP_105965325.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=RM672_RS01925;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_105965325.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 356677 358026 . + . ID=gene-RM672_RS01930;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=RM672_RS01930;old_locus_tag=RM672_01930 NZ_JAVRJS010000001.1 Protein Homology CDS 356677 358026 . + 0 ID=cds-WP_037573882.1;Parent=gene-RM672_RS01930;Dbxref=GenBank:WP_037573882.1;Name=WP_037573882.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=RM672_RS01930;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_037573882.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 358016 359491 . + . ID=gene-RM672_RS01935;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=RM672_RS01935;old_locus_tag=RM672_01935 NZ_JAVRJS010000001.1 Protein Homology CDS 358016 359491 . + 0 ID=cds-WP_037573879.1;Parent=gene-RM672_RS01935;Dbxref=GenBank:WP_037573879.1;Name=WP_037573879.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382526.1;locus_tag=RM672_RS01935;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_037573879.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 359648 360034 . - . ID=gene-RM672_RS01940;Name=RM672_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01940;old_locus_tag=RM672_01940 NZ_JAVRJS010000001.1 Protein Homology CDS 359648 360034 . - 0 ID=cds-WP_037573877.1;Parent=gene-RM672_RS01940;Dbxref=GenBank:WP_037573877.1;Name=WP_037573877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572316.1;locus_tag=RM672_RS01940;product=rhodanese-like domain-containing protein;protein_id=WP_037573877.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 360182 361012 . + . ID=gene-RM672_RS01945;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=RM672_RS01945;old_locus_tag=RM672_01945 NZ_JAVRJS010000001.1 Protein Homology CDS 360182 361012 . + 0 ID=cds-WP_037573874.1;Parent=gene-RM672_RS01945;Dbxref=GenBank:WP_037573874.1;Name=WP_037573874.1;Ontology_term=GO:0009107,GO:0009249,GO:0036211,GO:0033819;gbkey=CDS;gene=lipM;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=RM672_RS01945;product=octanoyltransferase LipM;protein_id=WP_037573874.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 361062 361286 . - . ID=gene-RM672_RS01950;Name=RM672_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01950;old_locus_tag=RM672_01950 NZ_JAVRJS010000001.1 Protein Homology CDS 361062 361286 . - 0 ID=cds-WP_037573873.1;Parent=gene-RM672_RS01950;Dbxref=GenBank:WP_037573873.1;Name=WP_037573873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425161.1;locus_tag=RM672_RS01950;product=SA1362 family protein;protein_id=WP_037573873.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 361298 361900 . - . ID=gene-RM672_RS01955;Name=RM672_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01955;old_locus_tag=RM672_01955 NZ_JAVRJS010000001.1 Protein Homology CDS 361298 361900 . - 0 ID=cds-WP_311539168.1;Parent=gene-RM672_RS01955;Dbxref=GenBank:WP_311539168.1;Name=WP_311539168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425160.1;locus_tag=RM672_RS01955;product=hypothetical protein;protein_id=WP_311539168.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 361992 363053 . + . ID=gene-RM672_RS01960;Name=RM672_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01960;old_locus_tag=RM672_01960 NZ_JAVRJS010000001.1 Protein Homology CDS 361992 363053 . + 0 ID=cds-WP_311542448.1;Parent=gene-RM672_RS01960;Dbxref=GenBank:WP_311542448.1;Name=WP_311542448.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425159.1;locus_tag=RM672_RS01960;product=M24 family metallopeptidase;protein_id=WP_311542448.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 363081 363638 . + . ID=gene-RM672_RS01965;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=RM672_RS01965;old_locus_tag=RM672_01965 NZ_JAVRJS010000001.1 Protein Homology CDS 363081 363638 . + 0 ID=cds-WP_037573865.1;Parent=gene-RM672_RS01965;Dbxref=GenBank:WP_037573865.1;Name=WP_037573865.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275683.1;locus_tag=RM672_RS01965;product=elongation factor P;protein_id=WP_037573865.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 363854 364312 . + . ID=gene-RM672_RS01970;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=RM672_RS01970;old_locus_tag=RM672_01970 NZ_JAVRJS010000001.1 Protein Homology CDS 363854 364312 . + 0 ID=cds-WP_037573863.1;Parent=gene-RM672_RS01970;Dbxref=GenBank:WP_037573863.1;Name=WP_037573863.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451908.1;locus_tag=RM672_RS01970;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037573863.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 364314 365669 . + . ID=gene-RM672_RS01975;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=RM672_RS01975;old_locus_tag=RM672_01975 NZ_JAVRJS010000001.1 Protein Homology CDS 364314 365669 . + 0 ID=cds-WP_037573862.1;Parent=gene-RM672_RS01975;Dbxref=GenBank:WP_037573862.1;Name=WP_037573862.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500137.1;locus_tag=RM672_RS01975;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_037573862.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 365692 366066 . + . ID=gene-RM672_RS01980;Name=RM672_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01980;old_locus_tag=RM672_01980 NZ_JAVRJS010000001.1 Protein Homology CDS 365692 366066 . + 0 ID=cds-WP_037573860.1;Parent=gene-RM672_RS01980;Dbxref=GenBank:WP_037573860.1;Name=WP_037573860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=RM672_RS01980;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037573860.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 366088 366480 . + . ID=gene-RM672_RS01985;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=RM672_RS01985;old_locus_tag=RM672_01985 NZ_JAVRJS010000001.1 Protein Homology CDS 366088 366480 . + 0 ID=cds-WP_037573858.1;Parent=gene-RM672_RS01985;Dbxref=GenBank:WP_037573858.1;Name=WP_037573858.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=RM672_RS01985;product=transcription antitermination factor NusB;protein_id=WP_037573858.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 366489 367835 . + . ID=gene-RM672_RS01990;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=RM672_RS01990;old_locus_tag=RM672_01990 NZ_JAVRJS010000001.1 Protein Homology CDS 366489 367835 . + 0 ID=cds-WP_311541271.1;Parent=gene-RM672_RS01990;Dbxref=GenBank:WP_311541271.1;Name=WP_311541271.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=RM672_RS01990;product=exodeoxyribonuclease VII large subunit;protein_id=WP_311541271.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 367819 368043 . + . ID=gene-RM672_RS01995;Name=RM672_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS01995;old_locus_tag=RM672_01995 NZ_JAVRJS010000001.1 Protein Homology CDS 367819 368043 . + 0 ID=cds-WP_037573854.1;Parent=gene-RM672_RS01995;Dbxref=GenBank:WP_037573854.1;Name=WP_037573854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=RM672_RS01995;product=exodeoxyribonuclease VII small subunit;protein_id=WP_037573854.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 368021 368905 . + . ID=gene-RM672_RS02000;Name=RM672_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02000;old_locus_tag=RM672_02000 NZ_JAVRJS010000001.1 Protein Homology CDS 368021 368905 . + 0 ID=cds-WP_037573852.1;Parent=gene-RM672_RS02000;Dbxref=GenBank:WP_037573852.1;Name=WP_037573852.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364978.1;locus_tag=RM672_RS02000;product=polyprenyl synthetase family protein;protein_id=WP_037573852.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 368941 370830 . + . ID=gene-RM672_RS02005;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=RM672_RS02005;old_locus_tag=RM672_02005 NZ_JAVRJS010000001.1 Protein Homology CDS 368941 370830 . + 0 ID=cds-WP_037573851.1;Parent=gene-RM672_RS02005;Dbxref=GenBank:WP_037573851.1;Name=WP_037573851.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010287828.1;locus_tag=RM672_RS02005;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_037573851.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 371032 371484 . + . ID=gene-RM672_RS02010;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=RM672_RS02010;old_locus_tag=RM672_02010 NZ_JAVRJS010000001.1 Protein Homology CDS 371032 371484 . + 0 ID=cds-WP_037573850.1;Parent=gene-RM672_RS02010;Dbxref=GenBank:WP_037573850.1;Name=WP_037573850.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=RM672_RS02010;product=transcriptional regulator AhrC/ArgR;protein_id=WP_037573850.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 371497 373170 . + . ID=gene-RM672_RS02015;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=RM672_RS02015;old_locus_tag=RM672_02015 NZ_JAVRJS010000001.1 Protein Homology CDS 371497 373170 . + 0 ID=cds-WP_103159091.1;Parent=gene-RM672_RS02015;Dbxref=GenBank:WP_103159091.1;Name=WP_103159091.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468378.1;locus_tag=RM672_RS02015;product=DNA repair protein RecN;protein_id=WP_103159091.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 373185 374081 . + . ID=gene-RM672_RS02020;Name=RM672_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02020;old_locus_tag=RM672_02020 NZ_JAVRJS010000001.1 Protein Homology CDS 373185 374081 . + 0 ID=cds-WP_311541273.1;Parent=gene-RM672_RS02020;Dbxref=GenBank:WP_311541273.1;Name=WP_311541273.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724554.1;locus_tag=RM672_RS02020;product=phosphate acyltransferase;protein_id=WP_311541273.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 374137 375195 . + . ID=gene-RM672_RS02025;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=RM672_RS02025;old_locus_tag=RM672_02025 NZ_JAVRJS010000001.1 Protein Homology CDS 374137 375195 . + 0 ID=cds-WP_311541274.1;Parent=gene-RM672_RS02025;Dbxref=GenBank:WP_311541274.1;Name=WP_311541274.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900390.1;locus_tag=RM672_RS02025;product=butyrate kinase;protein_id=WP_311541274.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 375207 376625 . + . ID=gene-RM672_RS02030;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM672_RS02030;old_locus_tag=RM672_02030 NZ_JAVRJS010000001.1 Protein Homology CDS 375207 376625 . + 0 ID=cds-WP_037573847.1;Parent=gene-RM672_RS02030;Dbxref=GenBank:WP_037573847.1;Name=WP_037573847.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=RM672_RS02030;product=dihydrolipoyl dehydrogenase;protein_id=WP_037573847.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 376648 377646 . + . ID=gene-RM672_RS02035;Name=RM672_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02035;old_locus_tag=RM672_02035 NZ_JAVRJS010000001.1 Protein Homology CDS 376648 377646 . + 0 ID=cds-WP_311542449.1;Parent=gene-RM672_RS02035;Dbxref=GenBank:WP_311542449.1;Name=WP_311542449.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=RM672_RS02035;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_311542449.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 377639 378622 . + . ID=gene-RM672_RS02040;Name=RM672_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02040;old_locus_tag=RM672_02040 NZ_JAVRJS010000001.1 Protein Homology CDS 377639 378622 . + 0 ID=cds-WP_107388146.1;Parent=gene-RM672_RS02040;Dbxref=GenBank:WP_107388146.1;Name=WP_107388146.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=RM672_RS02040;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_107388146.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 378634 379899 . + . ID=gene-RM672_RS02045;Name=RM672_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02045;old_locus_tag=RM672_02045 NZ_JAVRJS010000001.1 Protein Homology CDS 378634 379899 . + 0 ID=cds-WP_311541276.1;Parent=gene-RM672_RS02045;Dbxref=GenBank:WP_311541276.1;Name=WP_311541276.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=RM672_RS02045;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_311541276.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 379964 380401 . + . ID=gene-RM672_RS02050;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=RM672_RS02050;old_locus_tag=RM672_02050 NZ_JAVRJS010000001.1 Protein Homology CDS 379964 380401 . + 0 ID=cds-WP_037573840.1;Parent=gene-RM672_RS02050;Dbxref=GenBank:WP_037573840.1;Name=WP_037573840.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=RM672_RS02050;product=bacilliredoxin BrxB;protein_id=WP_037573840.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 380413 381390 . + . ID=gene-RM672_RS02055;Name=RM672_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02055;old_locus_tag=RM672_02055 NZ_JAVRJS010000001.1 Protein Homology CDS 380413 381390 . + 0 ID=cds-WP_119505154.1;Parent=gene-RM672_RS02055;Dbxref=GenBank:WP_119505154.1;Name=WP_119505154.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=RM672_RS02055;product=aromatic acid exporter family protein;protein_id=WP_119505154.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 381442 381543 . - . ID=gene-RM672_RS02060;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=RM672_RS02060;old_locus_tag=RM672_02060 NZ_JAVRJS010000001.1 Protein Homology CDS 381442 381543 . - 0 ID=cds-WP_150130324.1;Parent=gene-RM672_RS02060;Dbxref=GenBank:WP_150130324.1;Name=WP_150130324.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=RM672_RS02060;product=stressosome-associated protein Prli42;protein_id=WP_150130324.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 381721 382833 . + . ID=gene-RM672_RS02065;Name=RM672_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02065;old_locus_tag=RM672_02065 NZ_JAVRJS010000001.1 Protein Homology CDS 381721 382833 . + 0 ID=cds-WP_037573836.1;Parent=gene-RM672_RS02065;Dbxref=GenBank:WP_037573836.1;Name=WP_037573836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425139.1;locus_tag=RM672_RS02065;product=tripeptidase T;protein_id=WP_037573836.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 382925 384328 . + . ID=gene-RM672_RS02070;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=RM672_RS02070;old_locus_tag=RM672_02070 NZ_JAVRJS010000001.1 Protein Homology CDS 382925 384328 . + 0 ID=cds-WP_037573834.1;Parent=gene-RM672_RS02070;Dbxref=GenBank:WP_037573834.1;Name=WP_037573834.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=RM672_RS02070;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_037573834.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 384467 385324 . - . ID=gene-RM672_RS02075;Name=RM672_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02075;old_locus_tag=RM672_02075 NZ_JAVRJS010000001.1 Protein Homology CDS 384467 385324 . - 0 ID=cds-WP_037573832.1;Parent=gene-RM672_RS02075;Dbxref=GenBank:WP_037573832.1;Name=WP_037573832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511212.1;locus_tag=RM672_RS02075;product=AraC family transcriptional regulator;protein_id=WP_037573832.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 385428 386912 . - . ID=gene-RM672_RS02080;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=RM672_RS02080;old_locus_tag=RM672_02080 NZ_JAVRJS010000001.1 Protein Homology CDS 385428 386912 . - 0 ID=cds-WP_037573831.1;Parent=gene-RM672_RS02080;Dbxref=GenBank:WP_037573831.1;Name=WP_037573831.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382473.1;locus_tag=RM672_RS02080;product=glucose-6-phosphate dehydrogenase;protein_id=WP_037573831.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 387073 387990 . + . ID=gene-RM672_RS02085;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=RM672_RS02085;old_locus_tag=RM672_02085 NZ_JAVRJS010000001.1 Protein Homology CDS 387073 387990 . + 0 ID=cds-WP_037573830.1;Parent=gene-RM672_RS02085;Dbxref=GenBank:WP_037573830.1;Name=WP_037573830.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483224.1;locus_tag=RM672_RS02085;product=ribonuclease Z;protein_id=WP_037573830.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 388079 388897 . - . ID=gene-RM672_RS02090;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=RM672_RS02090;old_locus_tag=RM672_02090 NZ_JAVRJS010000001.1 Protein Homology CDS 388079 388897 . - 0 ID=cds-WP_037573829.1;Parent=gene-RM672_RS02090;Dbxref=GenBank:WP_037573829.1;Name=WP_037573829.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468364.1;locus_tag=RM672_RS02090;product=pyrroline-5-carboxylate reductase;protein_id=WP_037573829.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 389226 390134 . - . ID=gene-RM672_RS02095;Name=RM672_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02095;old_locus_tag=RM672_02095 NZ_JAVRJS010000001.1 Protein Homology CDS 389226 390134 . - 0 ID=cds-WP_103159479.1;Parent=gene-RM672_RS02095;Dbxref=GenBank:WP_103159479.1;Name=WP_103159479.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500109.1;locus_tag=RM672_RS02095;product=aldo/keto reductase;protein_id=WP_103159479.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 390213 390755 . + . ID=gene-RM672_RS02100;Name=RM672_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02100;old_locus_tag=RM672_02100 NZ_JAVRJS010000001.1 Protein Homology CDS 390213 390755 . + 0 ID=cds-WP_103159478.1;Parent=gene-RM672_RS02100;Dbxref=GenBank:WP_103159478.1;Name=WP_103159478.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465769.1;locus_tag=RM672_RS02100;product=NUDIX hydrolase;protein_id=WP_103159478.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 390859 391311 . + . ID=gene-RM672_RS02105;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=RM672_RS02105;old_locus_tag=RM672_02105 NZ_JAVRJS010000001.1 Protein Homology CDS 390859 391311 . + 0 ID=cds-WP_103159477.1;Parent=gene-RM672_RS02105;Dbxref=GenBank:WP_103159477.1;Name=WP_103159477.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016186688.1;locus_tag=RM672_RS02105;product=ferric iron uptake transcriptional regulator;protein_id=WP_103159477.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 391351 392238 . + . ID=gene-RM672_RS02110;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=RM672_RS02110;old_locus_tag=RM672_02110 NZ_JAVRJS010000001.1 Protein Homology CDS 391351 392238 . + 0 ID=cds-WP_103159476.1;Parent=gene-RM672_RS02110;Dbxref=GenBank:WP_103159476.1;Name=WP_103159476.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425129.1;locus_tag=RM672_RS02110;product=site-specific tyrosine recombinase XerD;protein_id=WP_103159476.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 392260 392772 . - . ID=gene-RM672_RS02115;Name=RM672_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02115;old_locus_tag=RM672_02115 NZ_JAVRJS010000001.1 Protein Homology CDS 392260 392772 . - 0 ID=cds-WP_241955383.1;Parent=gene-RM672_RS02115;Dbxref=GenBank:WP_241955383.1;Name=WP_241955383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483231.1;locus_tag=RM672_RS02115;product=DUF309 domain-containing protein;protein_id=WP_241955383.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 392859 393593 . + . ID=gene-RM672_RS02120;Name=RM672_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02120;old_locus_tag=RM672_02120 NZ_JAVRJS010000001.1 Protein Homology CDS 392859 393593 . + 0 ID=cds-WP_103159474.1;Parent=gene-RM672_RS02120;Dbxref=GenBank:WP_103159474.1;Name=WP_103159474.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468357.1;locus_tag=RM672_RS02120;product=segregation and condensation protein A;protein_id=WP_103159474.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 393577 394122 . + . ID=gene-RM672_RS02125;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=RM672_RS02125;old_locus_tag=RM672_02125 NZ_JAVRJS010000001.1 Protein Homology CDS 393577 394122 . + 0 ID=cds-WP_311541277.1;Parent=gene-RM672_RS02125;Dbxref=GenBank:WP_311541277.1;Name=WP_311541277.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=RM672_RS02125;product=SMC-Scp complex subunit ScpB;protein_id=WP_311541277.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 394119 394862 . + . ID=gene-RM672_RS02130;Name=RM672_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02130;old_locus_tag=RM672_02130 NZ_JAVRJS010000001.1 Protein Homology CDS 394119 394862 . + 0 ID=cds-WP_037573811.1;Parent=gene-RM672_RS02130;Dbxref=GenBank:WP_037573811.1;Name=WP_037573811.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382455.1;locus_tag=RM672_RS02130;product=pseudouridine synthase;protein_id=WP_037573811.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 395034 395759 . + . ID=gene-RM672_RS02135;Name=RM672_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02135;old_locus_tag=RM672_02135 NZ_JAVRJS010000001.1 Protein Homology CDS 395034 395759 . + 0 ID=cds-WP_037573808.1;Parent=gene-RM672_RS02135;Dbxref=GenBank:WP_037573808.1;Name=WP_037573808.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483235.1;locus_tag=RM672_RS02135;product=response regulator transcription factor;protein_id=WP_037573808.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 395743 397476 . + . ID=gene-RM672_RS02140;Name=RM672_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02140;old_locus_tag=RM672_02140 NZ_JAVRJS010000001.1 Protein Homology CDS 395743 397476 . + 0 ID=cds-WP_037573805.1;Parent=gene-RM672_RS02140;Dbxref=GenBank:WP_037573805.1;Name=WP_037573805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=RM672_RS02140;product=ATP-binding protein;protein_id=WP_037573805.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 397804 398358 . + . ID=gene-RM672_RS02145;Name=RM672_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02145;old_locus_tag=RM672_02145 NZ_JAVRJS010000001.1 Protein Homology CDS 397804 398358 . + 0 ID=cds-WP_037573800.1;Parent=gene-RM672_RS02145;Dbxref=GenBank:WP_037573800.1;Name=WP_037573800.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637951.1;locus_tag=RM672_RS02145;product=ECF transporter S component;protein_id=WP_037573800.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 398432 398680 . - . ID=gene-RM672_RS02150;Name=RM672_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02150;old_locus_tag=RM672_02150 NZ_JAVRJS010000001.1 Protein Homology CDS 398432 398680 . - 0 ID=cds-WP_037573797.1;Parent=gene-RM672_RS02150;Dbxref=GenBank:WP_037573797.1;Name=WP_037573797.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=RM672_RS02150;product=ferredoxin;protein_id=WP_037573797.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 398787 399737 . + . ID=gene-RM672_RS02155;Name=RM672_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02155;old_locus_tag=RM672_02155 NZ_JAVRJS010000001.1 Protein Homology CDS 398787 399737 . + 0 ID=cds-WP_311541278.1;Parent=gene-RM672_RS02155;Dbxref=GenBank:WP_311541278.1;Name=WP_311541278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025846.7;locus_tag=RM672_RS02155;product=helix-turn-helix domain-containing protein;protein_id=WP_311541278.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 399730 401106 . + . ID=gene-RM672_RS02160;Name=RM672_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02160;old_locus_tag=RM672_02160 NZ_JAVRJS010000001.1 Protein Homology CDS 399730 401106 . + 0 ID=cds-WP_311541279.1;Parent=gene-RM672_RS02160;Dbxref=GenBank:WP_311541279.1;Name=WP_311541279.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472147.1;locus_tag=RM672_RS02160;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_311541279.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 401287 403146 . + . ID=gene-RM672_RS02165;Name=RM672_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02165;old_locus_tag=RM672_02165 NZ_JAVRJS010000001.1 Protein Homology CDS 401287 403146 . + 0 ID=cds-WP_311541280.1;Parent=gene-RM672_RS02165;Dbxref=GenBank:WP_311541280.1;Name=WP_311541280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451127.1;locus_tag=RM672_RS02165;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311541280.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 403422 404408 . + . ID=gene-RM672_RS02170;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=RM672_RS02170;old_locus_tag=RM672_02170 NZ_JAVRJS010000001.1 Protein Homology CDS 403422 404408 . + 0 ID=cds-WP_103159469.1;Parent=gene-RM672_RS02170;Dbxref=GenBank:WP_103159469.1;Name=WP_103159469.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=RM672_RS02170;product=bacillithiol disulfide reductase YpdA;protein_id=WP_103159469.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 404583 405551 . - . ID=gene-RM672_RS02175;Name=RM672_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02175;old_locus_tag=RM672_02175 NZ_JAVRJS010000001.1 Protein Homology CDS 404583 405551 . - 0 ID=cds-WP_311542450.1;Parent=gene-RM672_RS02175;Dbxref=GenBank:WP_311542450.1;Name=WP_311542450.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=obsolete asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=RM672_RS02175;product=asparaginase;protein_id=WP_311542450.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 405624 406295 . + . ID=gene-RM672_RS02180;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=RM672_RS02180;old_locus_tag=RM672_02180 NZ_JAVRJS010000001.1 Protein Homology CDS 405624 406295 . + 0 ID=cds-WP_107398582.1;Parent=gene-RM672_RS02180;Dbxref=GenBank:WP_107398582.1;Name=WP_107398582.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451130.1;locus_tag=RM672_RS02180;product=(d)CMP kinase;protein_id=WP_107398582.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 406527 407711 . + . ID=gene-RM672_RS02185;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=RM672_RS02185;old_locus_tag=RM672_02185 NZ_JAVRJS010000001.1 Protein Homology CDS 406527 407711 . + 0 ID=cds-WP_037573779.1;Parent=gene-RM672_RS02185;Dbxref=GenBank:WP_037573779.1;Name=WP_037573779.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382440.1;locus_tag=RM672_RS02185;product=30S ribosomal protein S1;protein_id=WP_037573779.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 408019 409329 . + . ID=gene-RM672_RS02190;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=RM672_RS02190;old_locus_tag=RM672_02190 NZ_JAVRJS010000001.1 Protein Homology CDS 408019 409329 . + 0 ID=cds-WP_311539151.1;Parent=gene-RM672_RS02190;Dbxref=GenBank:WP_311539151.1;Name=WP_311539151.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=RM672_RS02190;product=ribosome biogenesis GTPase Der;protein_id=WP_311539151.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 409346 410344 . + . ID=gene-RM672_RS02195;Name=RM672_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02195;old_locus_tag=RM672_02195 NZ_JAVRJS010000001.1 Protein Homology CDS 409346 410344 . + 0 ID=cds-WP_311541281.1;Parent=gene-RM672_RS02195;Dbxref=GenBank:WP_311541281.1;Name=WP_311541281.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=RM672_RS02195;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_311541281.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 410632 410904 . + . ID=gene-RM672_RS02200;Name=hbs;gbkey=Gene;gene=hbs;gene_biotype=protein_coding;gene_synonym=hbsU,hupA;locus_tag=RM672_RS02200;old_locus_tag=RM672_02200 NZ_JAVRJS010000001.1 Protein Homology CDS 410632 410904 . + 0 ID=cds-WP_037564282.1;Parent=gene-RM672_RS02200;Dbxref=GenBank:WP_037564282.1;Name=WP_037564282.1;Ontology_term=GO:0006270,GO:0030261,GO:0003677,GO:0030527,GO:0042802;gbkey=CDS;gene=hbs;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA,identical protein binding|0042802||IEA;go_process=DNA replication initiation|0006270||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=RM672_RS02200;product=non-specific DNA-binding protein Hbs;protein_id=WP_037564282.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 411192 411779 . + . ID=gene-RM672_RS02205;Name=RM672_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02205;old_locus_tag=RM672_02205 NZ_JAVRJS010000001.1 Protein Homology CDS 411192 411779 . + 0 ID=cds-WP_311539149.1;Parent=gene-RM672_RS02205;Dbxref=GenBank:WP_311539149.1;Name=WP_311539149.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: protein motif:HMM:NF046766.4;locus_tag=RM672_RS02205;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_311539149.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 411772 412482 . + . ID=gene-RM672_RS02210;Name=RM672_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02210;old_locus_tag=RM672_02210 NZ_JAVRJS010000001.1 Protein Homology CDS 411772 412482 . + 0 ID=cds-WP_037573770.1;Parent=gene-RM672_RS02210;Dbxref=GenBank:WP_037573770.1;Name=WP_037573770.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480974.1;locus_tag=RM672_RS02210;product=demethylmenaquinone methyltransferase;protein_id=WP_037573770.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 412498 413454 . + . ID=gene-RM672_RS02215;Name=RM672_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02215;old_locus_tag=RM672_02215 NZ_JAVRJS010000001.1 Protein Homology CDS 412498 413454 . + 0 ID=cds-WP_037573767.1;Parent=gene-RM672_RS02215;Dbxref=GenBank:WP_037573767.1;Name=WP_037573767.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=RM672_RS02215;product=polyprenyl synthetase family protein;protein_id=WP_037573767.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 413536 413985 . + . ID=gene-RM672_RS02220;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=RM672_RS02220;old_locus_tag=RM672_02220 NZ_JAVRJS010000001.1 Protein Homology CDS 413536 413985 . + 0 ID=cds-WP_103159465.1;Parent=gene-RM672_RS02220;Dbxref=GenBank:WP_103159465.1;Name=WP_103159465.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463054.1;locus_tag=RM672_RS02220;product=nucleoside-diphosphate kinase;protein_id=WP_103159465.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 414203 415369 . + . ID=gene-RM672_RS02225;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=RM672_RS02225;old_locus_tag=RM672_02225 NZ_JAVRJS010000001.1 Protein Homology CDS 414203 415369 . + 0 ID=cds-WP_103159464.1;Parent=gene-RM672_RS02225;Dbxref=GenBank:WP_103159464.1;Name=WP_103159464.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=RM672_RS02225;product=chorismate synthase;protein_id=WP_103159464.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 415382 416449 . + . ID=gene-RM672_RS02230;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=RM672_RS02230;old_locus_tag=RM672_02230 NZ_JAVRJS010000001.1 Protein Homology CDS 415382 416449 . + 0 ID=cds-WP_107363873.1;Parent=gene-RM672_RS02230;Dbxref=GenBank:WP_107363873.1;Name=WP_107363873.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=RM672_RS02230;product=3-dehydroquinate synthase;protein_id=WP_107363873.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 416450 417739 . + . ID=gene-RM672_RS02235;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=RM672_RS02235;old_locus_tag=RM672_02235 NZ_JAVRJS010000001.1 Protein Homology CDS 416450 417739 . + 0 ID=cds-WP_107360473.1;Parent=gene-RM672_RS02235;Dbxref=GenBank:WP_107360473.1;Name=WP_107360473.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=RM672_RS02235;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_107360473.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 417741 418982 . + . ID=gene-RM672_RS02240;Name=RM672_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02240;old_locus_tag=RM672_02240 NZ_JAVRJS010000001.1 Protein Homology CDS 417741 418982 . + 0 ID=cds-WP_103159463.1;Parent=gene-RM672_RS02240;Dbxref=GenBank:WP_103159463.1;Name=WP_103159463.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=RM672_RS02240;product=tetratricopeptide repeat protein;protein_id=WP_103159463.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 418994 419554 . + . ID=gene-RM672_RS02245;Name=RM672_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02245;old_locus_tag=RM672_02245 NZ_JAVRJS010000001.1 Protein Homology CDS 418994 419554 . + 0 ID=cds-WP_107366171.1;Parent=gene-RM672_RS02245;Dbxref=GenBank:WP_107366171.1;Name=WP_107366171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020439.7;locus_tag=RM672_RS02245;product=YpiB family protein;protein_id=WP_107366171.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 419559 420161 . + . ID=gene-RM672_RS02250;Name=RM672_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02250;old_locus_tag=RM672_02250 NZ_JAVRJS010000001.1 Protein Homology CDS 419559 420161 . + 0 ID=cds-WP_037573747.1;Parent=gene-RM672_RS02250;Dbxref=GenBank:WP_037573747.1;Name=WP_037573747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507575.1;locus_tag=RM672_RS02250;product=DUF1405 domain-containing protein;protein_id=WP_037573747.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 420198 420893 . + . ID=gene-RM672_RS02255;Name=RM672_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02255;old_locus_tag=RM672_02255 NZ_JAVRJS010000001.1 Protein Homology CDS 420198 420893 . + 0 ID=cds-WP_037573744.1;Parent=gene-RM672_RS02255;Dbxref=GenBank:WP_037573744.1;Name=WP_037573744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468925.1;locus_tag=RM672_RS02255;product=zinc metallopeptidase;protein_id=WP_037573744.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 421039 421359 . + . ID=gene-RM672_RS02260;Name=RM672_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02260;old_locus_tag=RM672_02260 NZ_JAVRJS010000001.1 Protein Homology CDS 421039 421359 . + 0 ID=cds-WP_037573741.1;Parent=gene-RM672_RS02260;Dbxref=GenBank:WP_037573741.1;Name=WP_037573741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507577.1;locus_tag=RM672_RS02260;product=nucleotide pyrophosphohydrolase;protein_id=WP_037573741.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 421376 422512 . + . ID=gene-RM672_RS02265;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=RM672_RS02265;old_locus_tag=RM672_02265 NZ_JAVRJS010000001.1 Protein Homology CDS 421376 422512 . + 0 ID=cds-WP_103159459.1;Parent=gene-RM672_RS02265;Dbxref=GenBank:WP_103159459.1;Name=WP_103159459.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383771.1;locus_tag=RM672_RS02265;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_103159459.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 422505 423707 . + . ID=gene-RM672_RS02270;Name=RM672_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02270;old_locus_tag=RM672_02270 NZ_JAVRJS010000001.1 Protein Homology CDS 422505 423707 . + 0 ID=cds-WP_311542451.1;Parent=gene-RM672_RS02270;Dbxref=GenBank:WP_311542451.1;Name=WP_311542451.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361529.1;locus_tag=RM672_RS02270;product=CCA tRNA nucleotidyltransferase;protein_id=WP_311542451.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 423694 424665 . + . ID=gene-RM672_RS02275;Name=RM672_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02275;old_locus_tag=RM672_02275 NZ_JAVRJS010000001.1 Protein Homology CDS 423694 424665 . + 0 ID=cds-WP_103159457.1;Parent=gene-RM672_RS02275;Dbxref=GenBank:WP_103159457.1;Name=WP_103159457.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=RM672_RS02275;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_103159457.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 424685 427369 . + . ID=gene-RM672_RS02280;Name=RM672_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02280;old_locus_tag=RM672_02280 NZ_JAVRJS010000001.1 Protein Homology CDS 424685 427369 . + 0 ID=cds-WP_105962818.1;Parent=gene-RM672_RS02280;Dbxref=GenBank:WP_105962818.1;Name=WP_105962818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364995.1;locus_tag=RM672_RS02280;product=ATP-dependent DNA helicase DinG%2C 3'-5' exoribonuclease type;protein_id=WP_105962818.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 427464 428756 . + . ID=gene-RM672_RS02285;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=RM672_RS02285;old_locus_tag=RM672_02285 NZ_JAVRJS010000001.1 Protein Homology CDS 427464 428756 . + 0 ID=cds-WP_037573726.1;Parent=gene-RM672_RS02285;Dbxref=GenBank:WP_037573726.1;Name=WP_037573726.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=RM672_RS02285;product=asparagine--tRNA ligase;protein_id=WP_037573726.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 428841 429533 . + . ID=gene-RM672_RS02290;Name=RM672_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02290;old_locus_tag=RM672_02290 NZ_JAVRJS010000001.1 Protein Homology CDS 428841 429533 . + 0 ID=cds-WP_037573723.1;Parent=gene-RM672_RS02290;Dbxref=GenBank:WP_037573723.1;Name=WP_037573723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=RM672_RS02290;product=DnaD domain-containing protein;protein_id=WP_037573723.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 429523 430197 . + . ID=gene-RM672_RS02295;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=RM672_RS02295;old_locus_tag=RM672_02295 NZ_JAVRJS010000001.1 Protein Homology CDS 429523 430197 . + 0 ID=cds-WP_103159454.1;Parent=gene-RM672_RS02295;Dbxref=GenBank:WP_103159454.1;Name=WP_103159454.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=RM672_RS02295;product=endonuclease III;protein_id=WP_103159454.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 430194 430562 . + . ID=gene-RM672_RS02300;Name=RM672_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02300;old_locus_tag=RM672_02300 NZ_JAVRJS010000001.1 Protein Homology CDS 430194 430562 . + 0 ID=cds-WP_233654886.1;Parent=gene-RM672_RS02300;Dbxref=GenBank:WP_233654886.1;Name=WP_233654886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425092.1;locus_tag=RM672_RS02300;product=YpoC family protein;protein_id=WP_233654886.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 430678 432867 . - . ID=gene-RM672_RS02305;Name=RM672_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02305;old_locus_tag=RM672_02305 NZ_JAVRJS010000001.1 Protein Homology CDS 430678 432867 . - 0 ID=cds-WP_311541283.1;Parent=gene-RM672_RS02305;Dbxref=GenBank:WP_311541283.1;Name=WP_311541283.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167620.1;locus_tag=RM672_RS02305;product=transglycosylase domain-containing protein;protein_id=WP_311541283.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 432864 433490 . - . ID=gene-RM672_RS02310;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=RM672_RS02310;old_locus_tag=RM672_02310 NZ_JAVRJS010000001.1 Protein Homology CDS 432864 433490 . - 0 ID=cds-WP_037573711.1;Parent=gene-RM672_RS02310;Dbxref=GenBank:WP_037573711.1;Name=WP_037573711.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=RM672_RS02310;product=Holliday junction resolvase RecU;protein_id=WP_037573711.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 434005 434337 . + . ID=gene-RM672_RS02315;Name=RM672_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02315;old_locus_tag=RM672_02315 NZ_JAVRJS010000001.1 Protein Homology CDS 434005 434337 . + 0 ID=cds-WP_105962816.1;Parent=gene-RM672_RS02315;Dbxref=GenBank:WP_105962816.1;Name=WP_105962816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020386.7;locus_tag=RM672_RS02315;product=DUF1798 family protein;protein_id=WP_105962816.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 434330 434887 . + . ID=gene-RM672_RS02320;Name=RM672_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02320;old_locus_tag=RM672_02320 NZ_JAVRJS010000001.1 Protein Homology CDS 434330 434887 . + 0 ID=cds-WP_233654887.1;Parent=gene-RM672_RS02320;Dbxref=GenBank:WP_233654887.1;Name=WP_233654887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480952.1;locus_tag=RM672_RS02320;product=SLOG family protein;protein_id=WP_233654887.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 434909 435244 . + . ID=gene-RM672_RS02325;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=RM672_RS02325;old_locus_tag=RM672_02325 NZ_JAVRJS010000001.1 Protein Homology CDS 434909 435244 . + 0 ID=cds-WP_037573703.1;Parent=gene-RM672_RS02325;Dbxref=GenBank:WP_037573703.1;Name=WP_037573703.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=RM672_RS02325;product=cell division regulator GpsB;protein_id=WP_037573703.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 435287 435668 . + . ID=gene-RM672_RS02330;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=RM672_RS02330;old_locus_tag=RM672_02330 NZ_JAVRJS010000001.1 cmsearch RNase_P_RNA 435287 435668 . + . ID=rna-RM672_RS02330;Parent=gene-RM672_RS02330;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS02330;product=RNase P RNA component class B NZ_JAVRJS010000001.1 cmsearch exon 435287 435668 . + . ID=exon-RM672_RS02330-1;Parent=rna-RM672_RS02330;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS02330;product=RNase P RNA component class B NZ_JAVRJS010000001.1 RefSeq gene 435866 436990 . + . ID=gene-RM672_RS02335;Name=RM672_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02335;old_locus_tag=RM672_02335 NZ_JAVRJS010000001.1 Protein Homology CDS 435866 436990 . + 0 ID=cds-WP_311541284.1;Parent=gene-RM672_RS02335;Dbxref=GenBank:WP_311541284.1;Name=WP_311541284.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425085.1;locus_tag=RM672_RS02335;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_311541284.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 437042 437956 . + . ID=gene-RM672_RS02340;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=RM672_RS02340;old_locus_tag=RM672_02340 NZ_JAVRJS010000001.1 Protein Homology CDS 437042 437956 . + 0 ID=cds-WP_037573697.1;Parent=gene-RM672_RS02340;Dbxref=GenBank:WP_037573697.1;Name=WP_037573697.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425084.1;locus_tag=RM672_RS02340;product=EamA family transporter RarD;protein_id=WP_037573697.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 438109 441570 . + . ID=gene-RM672_RS02345;Name=RM672_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02345;old_locus_tag=RM672_02345 NZ_JAVRJS010000001.1 Protein Homology CDS 438109 441570 . + 0 ID=cds-WP_311542452.1;Parent=gene-RM672_RS02345;Dbxref=GenBank:WP_311542452.1;Name=WP_311542452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=RM672_RS02345;product=dynamin family protein;protein_id=WP_311542452.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 441567 442454 . + . ID=gene-RM672_RS02350;Name=RM672_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02350;old_locus_tag=RM672_02350 NZ_JAVRJS010000001.1 Protein Homology CDS 441567 442454 . + 0 ID=cds-WP_037573691.1;Parent=gene-RM672_RS02350;Dbxref=GenBank:WP_037573691.1;Name=WP_037573691.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729127.1;locus_tag=RM672_RS02350;product=5'-3' exonuclease;protein_id=WP_037573691.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 442483 442908 . - . ID=gene-RM672_RS02355;Name=RM672_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02355;old_locus_tag=RM672_02355 NZ_JAVRJS010000001.1 Protein Homology CDS 442483 442908 . - 0 ID=cds-WP_103159449.1;Parent=gene-RM672_RS02355;Dbxref=GenBank:WP_103159449.1;Name=WP_103159449.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062934.1;locus_tag=RM672_RS02355;product=ribonuclease HI family protein;protein_id=WP_103159449.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 443098 443811 . - . ID=gene-RM672_RS02360;Name=RM672_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02360;old_locus_tag=RM672_02360 NZ_JAVRJS010000001.1 Protein Homology CDS 443098 443811 . - 0 ID=cds-WP_103159448.1;Parent=gene-RM672_RS02360;Dbxref=GenBank:WP_103159448.1;Name=WP_103159448.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=RM672_RS02360;product=queuosine precursor transporter;protein_id=WP_103159448.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 444061 444246 . + . ID=gene-RM672_RS02365;Name=RM672_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02365;old_locus_tag=RM672_02365 NZ_JAVRJS010000001.1 Protein Homology CDS 444061 444246 . + 0 ID=cds-WP_037573683.1;Parent=gene-RM672_RS02365;Dbxref=GenBank:WP_037573683.1;Name=WP_037573683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=RM672_RS02365;product=zinc-finger domain-containing protein;protein_id=WP_037573683.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 444257 445375 . + . ID=gene-RM672_RS02370;Name=RM672_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02370;old_locus_tag=RM672_02370 NZ_JAVRJS010000001.1 Protein Homology CDS 444257 445375 . + 0 ID=cds-WP_037573680.1;Parent=gene-RM672_RS02370;Dbxref=GenBank:WP_037573680.1;Name=WP_037573680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468951.1;locus_tag=RM672_RS02370;product=virulence factor;protein_id=WP_037573680.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 445394 445834 . + . ID=gene-RM672_RS02375;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=RM672_RS02375;old_locus_tag=RM672_02375 NZ_JAVRJS010000001.1 Protein Homology CDS 445394 445834 . + 0 ID=cds-WP_037573677.1;Parent=gene-RM672_RS02375;Dbxref=GenBank:WP_037573677.1;Name=WP_037573677.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=RM672_RS02375;product=bacilliredoxin BrxA;protein_id=WP_037573677.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 446048 447001 . + . ID=gene-RM672_RS02380;Name=RM672_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02380;old_locus_tag=RM672_02380 NZ_JAVRJS010000001.1 Protein Homology CDS 446048 447001 . + 0 ID=cds-WP_037573674.1;Parent=gene-RM672_RS02380;Dbxref=GenBank:WP_037573674.1;Name=WP_037573674.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=RM672_RS02380;product=thymidylate synthase;protein_id=WP_037573674.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 447063 447539 . + . ID=gene-RM672_RS02385;Name=RM672_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02385;old_locus_tag=RM672_02385 NZ_JAVRJS010000001.1 Protein Homology CDS 447063 447539 . + 0 ID=cds-WP_103159580.1;Parent=gene-RM672_RS02385;Dbxref=GenBank:WP_103159580.1;Name=WP_103159580.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=RM672_RS02385;product=dihydrofolate reductase;protein_id=WP_103159580.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 447557 448402 . + . ID=gene-RM672_RS02390;Name=RM672_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02390;old_locus_tag=RM672_02390 NZ_JAVRJS010000001.1 Protein Homology CDS 447557 448402 . + 0 ID=cds-WP_311542453.1;Parent=gene-RM672_RS02390;Dbxref=GenBank:WP_311542453.1;Name=WP_311542453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=RM672_RS02390;product=fatty acid kinase binding subunit FakB;protein_id=WP_311542453.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 448421 448948 . + . ID=gene-RM672_RS02395;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM672_RS02395;old_locus_tag=RM672_02395 NZ_JAVRJS010000001.1 Protein Homology CDS 448421 448948 . + 0 ID=cds-WP_037573665.1;Parent=gene-RM672_RS02395;Dbxref=GenBank:WP_037573665.1;Name=WP_037573665.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453252.1;locus_tag=RM672_RS02395;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_037573665.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 448941 449369 . + . ID=gene-RM672_RS02400;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=RM672_RS02400;old_locus_tag=RM672_02400 NZ_JAVRJS010000001.1 Protein Homology CDS 448941 449369 . + 0 ID=cds-WP_105965306.1;Parent=gene-RM672_RS02400;Dbxref=GenBank:WP_105965306.1;Name=WP_105965306.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=RM672_RS02400;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_105965306.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 449384 449884 . + . ID=gene-RM672_RS02405;Name=RM672_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02405;old_locus_tag=RM672_02405 NZ_JAVRJS010000001.1 Protein Homology CDS 449384 449884 . + 0 ID=cds-WP_105965305.1;Parent=gene-RM672_RS02405;Dbxref=GenBank:WP_105965305.1;Name=WP_105965305.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=RM672_RS02405;product=PTS sugar transporter subunit IIA;protein_id=WP_105965305.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 449884 450105 . + . ID=gene-RM672_RS02410;Name=RM672_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02410;old_locus_tag=RM672_02410 NZ_JAVRJS010000001.1 Protein Homology CDS 449884 450105 . + 0 ID=cds-WP_103159582.1;Parent=gene-RM672_RS02410;Dbxref=GenBank:WP_103159582.1;Name=WP_103159582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=RM672_RS02410;product=YozE family protein;protein_id=WP_103159582.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 450253 451692 . + . ID=gene-RM672_RS02415;Name=RM672_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02415;old_locus_tag=RM672_02415 NZ_JAVRJS010000001.1 Protein Homology CDS 450253 451692 . + 0 ID=cds-WP_107364015.1;Parent=gene-RM672_RS02415;Dbxref=GenBank:WP_107364015.1;Name=WP_107364015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455339.1;locus_tag=RM672_RS02415;product=S41 family peptidase;protein_id=WP_107364015.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 451692 452201 . + . ID=gene-RM672_RS02420;Name=RM672_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02420;old_locus_tag=RM672_02420 NZ_JAVRJS010000001.1 Protein Homology CDS 451692 452201 . + 0 ID=cds-WP_105965303.1;Parent=gene-RM672_RS02420;Dbxref=GenBank:WP_105965303.1;Name=WP_105965303.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729121.1;locus_tag=RM672_RS02420;product=GNAT family N-acetyltransferase;protein_id=WP_105965303.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 452211 453281 . + . ID=gene-RM672_RS02425;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=RM672_RS02425;old_locus_tag=RM672_02425 NZ_JAVRJS010000001.1 Protein Homology CDS 452211 453281 . + 0 ID=cds-WP_037573650.1;Parent=gene-RM672_RS02425;Dbxref=GenBank:WP_037573650.1;Name=WP_037573650.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425068.1;locus_tag=RM672_RS02425;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_037573650.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 453296 453910 . + . ID=gene-RM672_RS02430;Name=RM672_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02430;old_locus_tag=RM672_02430 NZ_JAVRJS010000001.1 Protein Homology CDS 453296 453910 . + 0 ID=cds-WP_037573648.1;Parent=gene-RM672_RS02430;Dbxref=GenBank:WP_037573648.1;Name=WP_037573648.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425067.1;locus_tag=RM672_RS02430;product=phosphatase PAP2 family protein;protein_id=WP_037573648.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 454267 454944 . + . ID=gene-RM672_RS02435;Name=RM672_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02435;old_locus_tag=RM672_02435 NZ_JAVRJS010000001.1 Protein Homology CDS 454267 454944 . + 0 ID=cds-WP_037573645.1;Parent=gene-RM672_RS02435;Dbxref=GenBank:WP_037573645.1;Name=WP_037573645.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=RM672_RS02435;product=response regulator transcription factor;protein_id=WP_037573645.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 454941 456311 . + . ID=gene-RM672_RS02440;Name=RM672_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02440;old_locus_tag=RM672_02440 NZ_JAVRJS010000001.1 Protein Homology CDS 454941 456311 . + 0 ID=cds-WP_103159586.1;Parent=gene-RM672_RS02440;Dbxref=GenBank:WP_103159586.1;Name=WP_103159586.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459152.1;locus_tag=RM672_RS02440;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_103159586.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 456402 459191 . + . ID=gene-RM672_RS02445;Name=RM672_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02445;old_locus_tag=RM672_02445 NZ_JAVRJS010000001.1 Protein Homology CDS 456402 459191 . + 0 ID=cds-WP_037573639.1;Parent=gene-RM672_RS02445;Dbxref=GenBank:WP_037573639.1;Name=WP_037573639.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=RM672_RS02445;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_037573639.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 459205 460461 . + . ID=gene-RM672_RS02450;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=RM672_RS02450;old_locus_tag=RM672_02450 NZ_JAVRJS010000001.1 Protein Homology CDS 459205 460461 . + 0 ID=cds-WP_037573635.1;Parent=gene-RM672_RS02450;Dbxref=GenBank:WP_037573635.1;Name=WP_037573635.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499943.1;locus_tag=RM672_RS02450;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_037573635.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 460755 461567 . + . ID=gene-RM672_RS02455;Name=RM672_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02455;old_locus_tag=RM672_02455 NZ_JAVRJS010000001.1 Protein Homology CDS 460755 461567 . + 0 ID=cds-WP_037573632.1;Parent=gene-RM672_RS02455;Dbxref=GenBank:WP_037573632.1;Name=WP_037573632.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442836.1;locus_tag=RM672_RS02455;product=VOC family protein;protein_id=WP_037573632.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 461584 461790 . + . ID=gene-RM672_RS02460;Name=RM672_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02460;old_locus_tag=RM672_02460 NZ_JAVRJS010000001.1 Protein Homology CDS 461584 461790 . + 0 ID=cds-WP_037573629.1;Parent=gene-RM672_RS02460;Dbxref=GenBank:WP_037573629.1;Name=WP_037573629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=RM672_RS02460;product=DUF6501 family protein;protein_id=WP_037573629.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 461858 462655 . + . ID=gene-RM672_RS02465;Name=RM672_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02465;old_locus_tag=RM672_02465 NZ_JAVRJS010000001.1 Protein Homology CDS 461858 462655 . + 0 ID=cds-WP_229717277.1;Parent=gene-RM672_RS02465;Dbxref=GenBank:WP_229717277.1;Name=WP_229717277.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=RM672_RS02465;product=ATP-binding protein;protein_id=WP_229717277.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 462667 464556 . + . ID=gene-RM672_RS02470;Name=RM672_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02470;old_locus_tag=RM672_02470 NZ_JAVRJS010000001.1 Protein Homology CDS 462667 464556 . + 0 ID=cds-WP_119505175.1;Parent=gene-RM672_RS02470;Dbxref=GenBank:WP_119505175.1;Name=WP_119505175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275795.1;locus_tag=RM672_RS02470;product=vWA domain-containing protein;protein_id=WP_119505175.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 464677 466023 . + . ID=gene-RM672_RS02475;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=RM672_RS02475;old_locus_tag=RM672_02475 NZ_JAVRJS010000001.1 Protein Homology CDS 464677 466023 . + 0 ID=cds-WP_037573621.1;Parent=gene-RM672_RS02475;Dbxref=GenBank:WP_037573621.1;Name=WP_037573621.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=RM672_RS02475;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_037573621.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 466159 467352 . - . ID=gene-RM672_RS02480;Name=RM672_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02480;old_locus_tag=RM672_02480 NZ_JAVRJS010000001.1 Protein Homology CDS 466159 467352 . - 0 ID=cds-WP_037573619.1;Parent=gene-RM672_RS02480;Dbxref=GenBank:WP_037573619.1;Name=WP_037573619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499935.1;locus_tag=RM672_RS02480;product=toxic anion resistance protein;protein_id=WP_037573619.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 467349 467984 . - . ID=gene-RM672_RS02485;Name=RM672_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02485;old_locus_tag=RM672_02485 NZ_JAVRJS010000001.1 Protein Homology CDS 467349 467984 . - 0 ID=cds-WP_037573617.1;Parent=gene-RM672_RS02485;Dbxref=GenBank:WP_037573617.1;Name=WP_037573617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425055.1;locus_tag=RM672_RS02485;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_037573617.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 468004 468273 . - . ID=gene-RM672_RS02490;Name=RM672_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02490;old_locus_tag=RM672_02490 NZ_JAVRJS010000001.1 Protein Homology CDS 468004 468273 . - 0 ID=cds-WP_037573614.1;Parent=gene-RM672_RS02490;Dbxref=GenBank:WP_037573614.1;Name=WP_037573614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480918.1;locus_tag=RM672_RS02490;product=acylphosphatase;protein_id=WP_037573614.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 468609 468917 . + . ID=gene-RM672_RS02495;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=RM672_RS02495;old_locus_tag=RM672_02495 NZ_JAVRJS010000001.1 Protein Homology CDS 468609 468917 . + 0 ID=cds-WP_037573611.1;Parent=gene-RM672_RS02495;Dbxref=GenBank:WP_037573611.1;Name=WP_037573611.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=RM672_RS02495;product=regulatory protein MsaA;protein_id=WP_037573611.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 469096 469296 . + . ID=gene-RM672_RS02500;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=RM672_RS02500;old_locus_tag=RM672_02500 NZ_JAVRJS010000001.1 Protein Homology CDS 469096 469296 . + 0 ID=cds-WP_001831260.1;Parent=gene-RM672_RS02500;Dbxref=GenBank:WP_001831260.1;Name=WP_001831260.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=RM672_RS02500;product=cold shock protein CspA;protein_id=WP_001831260.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 469558 470823 . - . ID=gene-RM672_RS02505;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=RM672_RS02505;old_locus_tag=RM672_02505 NZ_JAVRJS010000001.1 Protein Homology CDS 469558 470823 . - 0 ID=cds-WP_119505176.1;Parent=gene-RM672_RS02505;Dbxref=GenBank:WP_119505176.1;Name=WP_119505176.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365009.1;locus_tag=RM672_RS02505;product=diaminopimelate decarboxylase;protein_id=WP_119505176.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 470820 471890 . - . ID=gene-RM672_RS02510;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM672_RS02510;old_locus_tag=RM672_02510 NZ_JAVRJS010000001.1 Protein Homology CDS 470820 471890 . - 0 ID=cds-WP_119505177.1;Parent=gene-RM672_RS02510;Dbxref=GenBank:WP_119505177.1;Name=WP_119505177.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127604.1;locus_tag=RM672_RS02510;product=alanine racemase;protein_id=WP_119505177.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 471893 473041 . - . ID=gene-RM672_RS02515;Name=RM672_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02515;old_locus_tag=RM672_02515 NZ_JAVRJS010000001.1 Protein Homology CDS 471893 473041 . - 0 ID=cds-WP_119505178.1;Parent=gene-RM672_RS02515;Dbxref=GenBank:WP_119505178.1;Name=WP_119505178.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453219.1;locus_tag=RM672_RS02515;product=M20 metallopeptidase family protein;protein_id=WP_119505178.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 473229 473948 . - . ID=gene-RM672_RS02520;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=RM672_RS02520;old_locus_tag=RM672_02520 NZ_JAVRJS010000001.1 Protein Homology CDS 473229 473948 . - 0 ID=cds-WP_119505179.1;Parent=gene-RM672_RS02520;Dbxref=GenBank:WP_119505179.1;Name=WP_119505179.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499925.1;locus_tag=RM672_RS02520;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_119505179.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 473966 474688 . - . ID=gene-RM672_RS02525;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=RM672_RS02525;old_locus_tag=RM672_02525 NZ_JAVRJS010000001.1 Protein Homology CDS 473966 474688 . - 0 ID=cds-WP_103158861.1;Parent=gene-RM672_RS02525;Dbxref=GenBank:WP_103158861.1;Name=WP_103158861.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478208.1;locus_tag=RM672_RS02525;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_103158861.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 474685 475563 . - . ID=gene-RM672_RS02530;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=RM672_RS02530;old_locus_tag=RM672_02530 NZ_JAVRJS010000001.1 Protein Homology CDS 474685 475563 . - 0 ID=cds-WP_037573597.1;Parent=gene-RM672_RS02530;Dbxref=GenBank:WP_037573597.1;Name=WP_037573597.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303134.1;locus_tag=RM672_RS02530;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_037573597.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 475585 476568 . - . ID=gene-RM672_RS02535;Name=RM672_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02535;old_locus_tag=RM672_02535 NZ_JAVRJS010000001.1 Protein Homology CDS 475585 476568 . - 0 ID=cds-WP_105996607.1;Parent=gene-RM672_RS02535;Dbxref=GenBank:WP_105996607.1;Name=WP_105996607.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase (NADP+) activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499922.1;locus_tag=RM672_RS02535;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_105996607.1;transl_table=11 NZ_JAVRJS010000001.1 cmsearch riboswitch 476687 476863 . - . ID=id-NZ_JAVRJS010000001.1:476687..476863;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000001.1 RefSeq gene 477025 478632 . - . ID=gene-RM672_RS02540;Name=RM672_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02540;old_locus_tag=RM672_02540 NZ_JAVRJS010000001.1 Protein Homology CDS 477025 478632 . - 0 ID=cds-WP_037573587.1;Parent=gene-RM672_RS02540;Dbxref=GenBank:WP_037573587.1;Name=WP_037573587.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=RM672_RS02540;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_037573587.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 478789 479694 . + . ID=gene-RM672_RS02545;Name=RM672_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02545;old_locus_tag=RM672_02545 NZ_JAVRJS010000001.1 Protein Homology CDS 478789 479694 . + 0 ID=cds-WP_105965280.1;Parent=gene-RM672_RS02545;Dbxref=GenBank:WP_105965280.1;Name=WP_105965280.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167718.1;locus_tag=RM672_RS02545;product=CvfB family protein;protein_id=WP_105965280.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 479751 480695 . - . ID=gene-RM672_RS02550;Name=RM672_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02550;old_locus_tag=RM672_02550 NZ_JAVRJS010000001.1 Protein Homology CDS 479751 480695 . - 0 ID=cds-WP_157946138.1;Parent=gene-RM672_RS02550;Dbxref=GenBank:WP_157946138.1;Name=WP_157946138.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:TIGR03168.1;locus_tag=RM672_RS02550;product=1-phosphofructokinase family hexose kinase;protein_id=WP_157946138.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 480839 482650 . - . ID=gene-RM672_RS02555;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM672_RS02555;old_locus_tag=RM672_02555 NZ_JAVRJS010000001.1 Protein Homology CDS 480839 482650 . - 0 ID=cds-WP_311541288.1;Parent=gene-RM672_RS02555;Dbxref=GenBank:WP_311541288.1;Name=WP_311541288.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507656.1;locus_tag=RM672_RS02555;product=oligoendopeptidase F;protein_id=WP_311541288.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 482781 483104 . + . ID=gene-RM672_RS02560;Name=RM672_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02560;old_locus_tag=RM672_02560 NZ_JAVRJS010000001.1 Protein Homology CDS 482781 483104 . + 0 ID=cds-WP_107371675.1;Parent=gene-RM672_RS02560;Dbxref=GenBank:WP_107371675.1;Name=WP_107371675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167722.1;locus_tag=RM672_RS02560;product=hypothetical protein;protein_id=WP_107371675.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 483589 484848 . - . ID=gene-RM672_RS02565;Name=RM672_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02565;old_locus_tag=RM672_02565 NZ_JAVRJS010000001.1 Protein Homology CDS 483589 484848 . - 0 ID=cds-WP_037573574.1;Parent=gene-RM672_RS02565;Dbxref=GenBank:WP_037573574.1;Name=WP_037573574.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=RM672_RS02565;product=aminoacyltransferase;protein_id=WP_037573574.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 484873 486132 . - . ID=gene-RM672_RS02570;Name=RM672_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02570;old_locus_tag=RM672_02570 NZ_JAVRJS010000001.1 Protein Homology CDS 484873 486132 . - 0 ID=cds-WP_037573569.1;Parent=gene-RM672_RS02570;Dbxref=GenBank:WP_037573569.1;Name=WP_037573569.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468762.1;locus_tag=RM672_RS02570;product=aminoacyltransferase;protein_id=WP_037573569.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 486647 487741 . + . ID=gene-RM672_RS02575;Name=RM672_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02575;old_locus_tag=RM672_02575 NZ_JAVRJS010000001.1 Protein Homology CDS 486647 487741 . + 0 ID=cds-WP_105962806.1;Parent=gene-RM672_RS02575;Dbxref=GenBank:WP_105962806.1;Name=WP_105962806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=RM672_RS02575;product=prephenate dehydrogenase;protein_id=WP_105962806.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 487874 489136 . - . ID=gene-RM672_RS02580;Name=RM672_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02580;old_locus_tag=RM672_02580 NZ_JAVRJS010000001.1 Protein Homology CDS 487874 489136 . - 0 ID=cds-WP_037573565.1;Parent=gene-RM672_RS02580;Dbxref=GenBank:WP_037573565.1;Name=WP_037573565.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=RM672_RS02580;product=Y-family DNA polymerase;protein_id=WP_037573565.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 489290 489700 . - . ID=gene-RM672_RS02585;Name=RM672_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02585;old_locus_tag=RM672_02585 NZ_JAVRJS010000001.1 Protein Homology CDS 489290 489700 . - 0 ID=cds-WP_037573563.1;Parent=gene-RM672_RS02585;Dbxref=GenBank:WP_037573563.1;Name=WP_037573563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=RM672_RS02585;product=sporulation protein;protein_id=WP_037573563.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 489843 490028 . + . ID=gene-RM672_RS02590;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=RM672_RS02590;old_locus_tag=RM672_02590 NZ_JAVRJS010000001.1 Protein Homology CDS 489843 490028 . + 0 ID=cds-WP_103158872.1;Parent=gene-RM672_RS02590;Dbxref=GenBank:WP_103158872.1;Name=WP_103158872.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=RM672_RS02590;product=2-hydroxymuconate tautomerase;protein_id=WP_103158872.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 490068 491033 . - . ID=gene-RM672_RS02595;Name=RM672_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02595;old_locus_tag=RM672_02595 NZ_JAVRJS010000001.1 Protein Homology CDS 490068 491033 . - 0 ID=cds-WP_105962805.1;Parent=gene-RM672_RS02595;Dbxref=GenBank:WP_105962805.1;Name=WP_105962805.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499888.1;locus_tag=RM672_RS02595;product=LCP family protein;protein_id=WP_105962805.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 491177 491692 . + . ID=gene-RM672_RS02600;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM672_RS02600;old_locus_tag=RM672_02600 NZ_JAVRJS010000001.1 Protein Homology CDS 491177 491692 . + 0 ID=cds-WP_103158874.1;Parent=gene-RM672_RS02600;Dbxref=GenBank:WP_103158874.1;Name=WP_103158874.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497837.1;locus_tag=RM672_RS02600;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_103158874.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 491885 494404 . - . ID=gene-RM672_RS02605;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=RM672_RS02605;old_locus_tag=RM672_02605 NZ_JAVRJS010000001.1 Protein Homology CDS 491885 494404 . - 0 ID=cds-WP_103158875.1;Parent=gene-RM672_RS02605;Dbxref=GenBank:WP_103158875.1;Name=WP_103158875.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275840.1;locus_tag=RM672_RS02605;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_103158875.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 494588 495811 . - . ID=gene-RM672_RS02610;Name=RM672_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02610;old_locus_tag=RM672_02610 NZ_JAVRJS010000001.1 Protein Homology CDS 494588 495811 . - 0 ID=cds-WP_105965275.1;Parent=gene-RM672_RS02610;Dbxref=GenBank:WP_105965275.1;Name=WP_105965275.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499885.1;locus_tag=RM672_RS02610;product=AI-2E family transporter;protein_id=WP_105965275.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 496021 498063 . - . ID=gene-RM672_RS02615;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=RM672_RS02615;old_locus_tag=RM672_02615 NZ_JAVRJS010000001.1 Protein Homology CDS 496021 498063 . - 0 ID=cds-WP_107370254.1;Parent=gene-RM672_RS02615;Dbxref=GenBank:WP_107370254.1;Name=WP_107370254.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167733.1;locus_tag=RM672_RS02615;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_107370254.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 498172 499023 . - . ID=gene-RM672_RS02620;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=RM672_RS02620;old_locus_tag=RM672_02620 NZ_JAVRJS010000001.1 Protein Homology CDS 498172 499023 . - 0 ID=cds-WP_037573547.1;Parent=gene-RM672_RS02620;Dbxref=GenBank:WP_037573547.1;Name=WP_037573547.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=RM672_RS02620;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_037573547.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 499187 500656 . - . ID=gene-RM672_RS02625;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=RM672_RS02625;old_locus_tag=RM672_02625 NZ_JAVRJS010000001.1 Protein Homology CDS 499187 500656 . - 0 ID=cds-WP_037573545.1;Parent=gene-RM672_RS02625;Dbxref=GenBank:WP_037573545.1;Name=WP_037573545.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499882.1;locus_tag=RM672_RS02625;product=glutamine transporter AlsT;protein_id=WP_037573545.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 500746 503172 . - . ID=gene-RM672_RS02630;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=RM672_RS02630;old_locus_tag=RM672_02630 NZ_JAVRJS010000001.1 Protein Homology CDS 500746 503172 . - 0 ID=cds-WP_105967293.1;Parent=gene-RM672_RS02630;Dbxref=GenBank:WP_105967293.1;Name=WP_105967293.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=RM672_RS02630;product=DNA topoisomerase IV subunit A;protein_id=WP_105967293.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 503172 505166 . - . ID=gene-RM672_RS02635;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=RM672_RS02635;old_locus_tag=RM672_02635 NZ_JAVRJS010000001.1 Protein Homology CDS 503172 505166 . - 0 ID=cds-WP_105962800.1;Parent=gene-RM672_RS02635;Dbxref=GenBank:WP_105962800.1;Name=WP_105962800.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=RM672_RS02635;product=DNA topoisomerase IV subunit B;protein_id=WP_105962800.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 505380 505961 . + . ID=gene-RM672_RS02640;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=RM672_RS02640;old_locus_tag=RM672_02640 NZ_JAVRJS010000001.1 Protein Homology CDS 505380 505961 . + 0 ID=cds-WP_037573536.1;Parent=gene-RM672_RS02640;Dbxref=GenBank:WP_037573536.1;Name=WP_037573536.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=RM672_RS02640;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_037573536.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 506045 506344 . + . ID=gene-RM672_RS02645;Name=RM672_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02645;old_locus_tag=RM672_02645 NZ_JAVRJS010000001.1 Protein Homology CDS 506045 506344 . + 0 ID=cds-WP_105962798.1;Parent=gene-RM672_RS02645;Dbxref=GenBank:WP_105962798.1;Name=WP_105962798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499877.1;locus_tag=RM672_RS02645;product=HesB/YadR/YfhF family protein;protein_id=WP_105962798.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 506499 506951 . - . ID=gene-RM672_RS02650;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=RM672_RS02650;old_locus_tag=RM672_02650 NZ_JAVRJS010000001.1 Protein Homology CDS 506499 506951 . - 0 ID=cds-WP_037573533.1;Parent=gene-RM672_RS02650;Dbxref=GenBank:WP_037573533.1;Name=WP_037573533.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831194.1;locus_tag=RM672_RS02650;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_037573533.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 507141 509843 . - . ID=gene-RM672_RS02655;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=RM672_RS02655;old_locus_tag=RM672_02655 NZ_JAVRJS010000001.1 Protein Homology CDS 507141 509843 . - 0 ID=cds-WP_311541289.1;Parent=gene-RM672_RS02655;Dbxref=GenBank:WP_311541289.1;Name=WP_311541289.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=RM672_RS02655;product=aconitate hydratase AcnA;protein_id=WP_311541289.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 510120 511754 . - . ID=gene-RM672_RS02660;Name=RM672_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02660;old_locus_tag=RM672_02660 NZ_JAVRJS010000001.1 Protein Homology CDS 510120 511754 . - 0 ID=cds-WP_103158881.1;Parent=gene-RM672_RS02660;Dbxref=GenBank:WP_103158881.1;Name=WP_103158881.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=RM672_RS02660;product=BCCT family transporter;protein_id=WP_103158881.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 511999 512364 . + . ID=gene-RM672_RS02665;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=RM672_RS02665;old_locus_tag=RM672_02665 NZ_JAVRJS010000001.1 Protein Homology CDS 511999 512364 . + 0 ID=cds-WP_037573524.1;Parent=gene-RM672_RS02665;Dbxref=GenBank:WP_037573524.1;Name=WP_037573524.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480859.1;locus_tag=RM672_RS02665;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_037573524.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 512630 515662 . - . ID=gene-RM672_RS02670;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=RM672_RS02670;old_locus_tag=RM672_02670 NZ_JAVRJS010000001.1 Protein Homology CDS 512630 515662 . - 0 ID=cds-WP_103158882.1;Parent=gene-RM672_RS02670;Dbxref=GenBank:WP_103158882.1;Name=WP_103158882.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF041751.2;locus_tag=RM672_RS02670;product=exonuclease subunit SbcC;protein_id=WP_103158882.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 515664 516782 . - . ID=gene-RM672_RS02675;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=RM672_RS02675;old_locus_tag=RM672_02675 NZ_JAVRJS010000001.1 Protein Homology CDS 515664 516782 . - 0 ID=cds-WP_037573512.1;Parent=gene-RM672_RS02675;Dbxref=GenBank:WP_037573512.1;Name=WP_037573512.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=RM672_RS02675;product=exonuclease subunit SbcD;protein_id=WP_037573512.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 516927 517400 . - . ID=gene-RM672_RS02680;Name=RM672_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02680;old_locus_tag=RM672_02680 NZ_JAVRJS010000001.1 Protein Homology CDS 516927 517400 . - 0 ID=cds-WP_037573510.1;Parent=gene-RM672_RS02680;Dbxref=GenBank:WP_037573510.1;Name=WP_037573510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165384.1;locus_tag=RM672_RS02680;product=CcdC family protein;protein_id=WP_037573510.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 517579 517806 . - . ID=gene-RM672_RS02685;Name=RM672_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02685;old_locus_tag=RM672_02685 NZ_JAVRJS010000001.1 Protein Homology CDS 517579 517806 . - 0 ID=cds-WP_210433439.1;Parent=gene-RM672_RS02685;Dbxref=GenBank:WP_210433439.1;Name=WP_210433439.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=RM672_RS02685;product=YneF family protein;protein_id=WP_210433439.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 518074 520062 . - . ID=gene-RM672_RS02690;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=RM672_RS02690;old_locus_tag=RM672_02690 NZ_JAVRJS010000001.1 Protein Homology CDS 518074 520062 . - 0 ID=cds-WP_105962797.1;Parent=gene-RM672_RS02690;Dbxref=GenBank:WP_105962797.1;Name=WP_105962797.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001661967.1;locus_tag=RM672_RS02690;product=transketolase;protein_id=WP_105962797.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 520142 520381 . - . ID=gene-RM672_RS02695;Name=RM672_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02695;old_locus_tag=RM672_02695 NZ_JAVRJS010000001.1 Protein Homology CDS 520142 520381 . - 0 ID=cds-WP_037573504.1;Parent=gene-RM672_RS02695;Dbxref=GenBank:WP_037573504.1;Name=WP_037573504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442718.1;locus_tag=RM672_RS02695;product=DUF896 domain-containing protein;protein_id=WP_037573504.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 520610 520834 . - . ID=gene-RM672_RS02700;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=RM672_RS02700;old_locus_tag=RM672_02700 NZ_JAVRJS010000001.1 Protein Homology CDS 520610 520834 . - 0 ID=cds-WP_037573496.1;Parent=gene-RM672_RS02700;Dbxref=GenBank:WP_037573496.1;Name=WP_037573496.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=RM672_RS02700;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_037573496.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 520978 521601 . + . ID=gene-RM672_RS02705;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=RM672_RS02705;old_locus_tag=RM672_02705 NZ_JAVRJS010000001.1 Protein Homology CDS 520978 521601 . + 0 ID=cds-WP_037573494.1;Parent=gene-RM672_RS02705;Dbxref=GenBank:WP_037573494.1;Name=WP_037573494.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=RM672_RS02705;product=transcriptional repressor LexA;protein_id=WP_037573494.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 521853 522785 . - . ID=gene-RM672_RS02710;Name=RM672_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02710;old_locus_tag=RM672_02710 NZ_JAVRJS010000001.1 Protein Homology CDS 521853 522785 . - 0 ID=cds-WP_311541290.1;Parent=gene-RM672_RS02710;Dbxref=GenBank:WP_311541290.1;Name=WP_311541290.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167752.1;locus_tag=RM672_RS02710;product=CAP domain-containing protein;protein_id=WP_311541290.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 522879 523856 . - . ID=gene-RM672_RS02715;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=RM672_RS02715;old_locus_tag=RM672_02715 NZ_JAVRJS010000001.1 Protein Homology CDS 522879 523856 . - 0 ID=cds-WP_037573492.1;Parent=gene-RM672_RS02715;Dbxref=GenBank:WP_037573492.1;Name=WP_037573492.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=RM672_RS02715;product=GMP reductase;protein_id=WP_037573492.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 523932 524201 . - . ID=gene-RM672_RS02720;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=RM672_RS02720;old_locus_tag=RM672_02720 NZ_JAVRJS010000001.1 Protein Homology CDS 523932 524201 . - 0 ID=cds-WP_037573490.1;Parent=gene-RM672_RS02720;Dbxref=GenBank:WP_037573490.1;Name=WP_037573490.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=RM672_RS02720;product=30S ribosomal protein S14;protein_id=WP_037573490.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 524389 524538 . + . ID=gene-RM672_RS02725;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM672_RS02725;old_locus_tag=RM672_02725 NZ_JAVRJS010000001.1 Protein Homology CDS 524389 524538 . + 0 ID=cds-WP_014613994.1;Parent=gene-RM672_RS02725;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM672_RS02725;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 524676 526172 . - . ID=gene-RM672_RS02730;Name=RM672_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02730;old_locus_tag=RM672_02730 NZ_JAVRJS010000001.1 Protein Homology CDS 524676 526172 . - 0 ID=cds-WP_037573488.1;Parent=gene-RM672_RS02730;Dbxref=GenBank:WP_037573488.1;Name=WP_037573488.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=RM672_RS02730;product=catalase;protein_id=WP_037573488.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 526380 527837 . + . ID=gene-RM672_RS02735;Name=RM672_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02735;old_locus_tag=RM672_02735 NZ_JAVRJS010000001.1 Protein Homology CDS 526380 527837 . + 0 ID=cds-WP_105962795.1;Parent=gene-RM672_RS02735;Dbxref=GenBank:WP_105962795.1;Name=WP_105962795.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900224.1;locus_tag=RM672_RS02735;product=amino acid permease;protein_id=WP_105962795.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 527953 528267 . + . ID=gene-RM672_RS02740;Name=RM672_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02740;old_locus_tag=RM672_02740 NZ_JAVRJS010000001.1 Protein Homology CDS 527953 528267 . + 0 ID=cds-WP_037573482.1;Parent=gene-RM672_RS02740;Dbxref=GenBank:WP_037573482.1;Name=WP_037573482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830950.1;locus_tag=RM672_RS02740;product=hypothetical protein;protein_id=WP_037573482.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 528328 529128 . - . ID=gene-RM672_RS02745;Name=RM672_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02745;old_locus_tag=RM672_02745 NZ_JAVRJS010000001.1 Protein Homology CDS 528328 529128 . - 0 ID=cds-WP_037573479.1;Parent=gene-RM672_RS02745;Dbxref=GenBank:WP_037573479.1;Name=WP_037573479.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=RM672_RS02745;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037573479.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 529232 530149 . - . ID=gene-RM672_RS02750;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=RM672_RS02750;old_locus_tag=RM672_02750 NZ_JAVRJS010000001.1 Protein Homology CDS 529232 530149 . - 0 ID=cds-WP_165806224.1;Parent=gene-RM672_RS02750;Dbxref=GenBank:WP_165806224.1;Name=WP_165806224.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507779.1;locus_tag=RM672_RS02750;product=homoserine kinase;protein_id=WP_165806224.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 530149 531213 . - . ID=gene-RM672_RS02755;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=RM672_RS02755;old_locus_tag=RM672_02755 NZ_JAVRJS010000001.1 Protein Homology CDS 530149 531213 . - 0 ID=cds-WP_311540598.1;Parent=gene-RM672_RS02755;Dbxref=GenBank:WP_311540598.1;Name=WP_311540598.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=RM672_RS02755;product=threonine synthase;protein_id=WP_311540598.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 531219 532502 . - . ID=gene-RM672_RS02760;Name=RM672_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02760;old_locus_tag=RM672_02760 NZ_JAVRJS010000001.1 Protein Homology CDS 531219 532502 . - 0 ID=cds-WP_037573467.1;Parent=gene-RM672_RS02760;Dbxref=GenBank:WP_037573467.1;Name=WP_037573467.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614000.1;locus_tag=RM672_RS02760;product=homoserine dehydrogenase;protein_id=WP_037573467.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 532693 534042 . + . ID=gene-RM672_RS02765;Name=RM672_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02765;old_locus_tag=RM672_02765 NZ_JAVRJS010000001.1 Protein Homology CDS 532693 534042 . + 0 ID=cds-WP_037573465.1;Parent=gene-RM672_RS02765;Dbxref=GenBank:WP_037573465.1;Name=WP_037573465.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167760.1;locus_tag=RM672_RS02765;product=aspartate kinase;protein_id=WP_037573465.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 534194 534784 . - . ID=gene-RM672_RS02770;Name=RM672_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02770;old_locus_tag=RM672_02770 NZ_JAVRJS010000001.1 Protein Homology CDS 534194 534784 . - 0 ID=cds-WP_311540600.1;Parent=gene-RM672_RS02770;Dbxref=GenBank:WP_311540600.1;Name=WP_311540600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424990.1;locus_tag=RM672_RS02770;product=hypothetical protein;protein_id=WP_311540600.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 535295 535660 . + . ID=gene-RM672_RS02775;Name=RM672_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02775;old_locus_tag=RM672_02775 NZ_JAVRJS010000001.1 Protein Homology CDS 535295 535660 . + 0 ID=cds-WP_037573462.1;Parent=gene-RM672_RS02775;Dbxref=GenBank:WP_037573462.1;Name=WP_037573462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384374.1;locus_tag=RM672_RS02775;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037573462.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 535866 536372 . - . ID=gene-RM672_RS02780;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=RM672_RS02780;old_locus_tag=RM672_02780 NZ_JAVRJS010000001.1 Protein Homology CDS 535866 536372 . - 0 ID=cds-WP_037573459.1;Parent=gene-RM672_RS02780;Dbxref=GenBank:WP_037573459.1;Name=WP_037573459.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=RM672_RS02780;product=thermonuclease NucI;protein_id=WP_037573459.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 536516 536725 . + . ID=gene-RM672_RS02785;Name=RM672_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02785;old_locus_tag=RM672_02785 NZ_JAVRJS010000001.1 Protein Homology CDS 536516 536725 . + 0 ID=cds-WP_037573457.1;Parent=gene-RM672_RS02785;Dbxref=GenBank:WP_037573457.1;Name=WP_037573457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=RM672_RS02785;product=hypothetical protein;protein_id=WP_037573457.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 536827 537429 . - . ID=gene-RM672_RS02790;Name=RM672_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02790;old_locus_tag=RM672_02790 NZ_JAVRJS010000001.1 Protein Homology CDS 536827 537429 . - 0 ID=cds-WP_136731840.1;Parent=gene-RM672_RS02790;Dbxref=GenBank:WP_136731840.1;Name=WP_136731840.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000624458.1;locus_tag=RM672_RS02790;product=response regulator transcription factor;protein_id=WP_136731840.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 537426 538517 . - . ID=gene-RM672_RS02795;Name=RM672_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02795;old_locus_tag=RM672_02795 NZ_JAVRJS010000001.1 Protein Homology CDS 537426 538517 . - 0 ID=cds-WP_157946335.1;Parent=gene-RM672_RS02795;Dbxref=GenBank:WP_157946335.1;Name=WP_157946335.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF019350.7;locus_tag=RM672_RS02795;product=sensor histidine kinase;protein_id=WP_157946335.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 538507 539109 . - . ID=gene-RM672_RS02800;Name=RM672_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02800;old_locus_tag=RM672_02800 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 538507 539109 . - 0 ID=cds-WP_375712627.1;Parent=gene-RM672_RS02800;Dbxref=GenBank:WP_375712627.1;Name=WP_375712627.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS02800;product=ABC transporter permease;protein_id=WP_375712627.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 539278 539895 . - . ID=gene-RM672_RS02805;Name=RM672_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02805;old_locus_tag=RM672_02805 NZ_JAVRJS010000001.1 Protein Homology CDS 539278 539895 . - 0 ID=cds-WP_051604956.1;Parent=gene-RM672_RS02805;Dbxref=GenBank:WP_051604956.1;Name=WP_051604956.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM672_RS02805;product=ABC transporter ATP-binding protein;protein_id=WP_051604956.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 540079 540291 . - . ID=gene-RM672_RS02810;Name=RM672_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02810;old_locus_tag=RM672_02810 NZ_JAVRJS010000001.1 Protein Homology CDS 540079 540291 . - 0 ID=cds-WP_037573449.1;Parent=gene-RM672_RS02810;Dbxref=GenBank:WP_037573449.1;Name=WP_037573449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997672.1;locus_tag=RM672_RS02810;product=Trp family transcriptional regulator;protein_id=WP_037573449.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 540510 540569 . + . ID=gene-RM672_RS11400;Name=RM672_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11400 NZ_JAVRJS010000001.1 Protein Homology CDS 540510 540569 . + 0 ID=cds-WP_105965347.1;Parent=gene-RM672_RS11400;Dbxref=GenBank:WP_105965347.1;Name=WP_105965347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=RM672_RS11400;product=epsilon family phenol-soluble modulin;protein_id=WP_105965347.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 541782 543122 . - . ID=gene-RM672_RS02815;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=RM672_RS02815;old_locus_tag=RM672_02815 NZ_JAVRJS010000001.1 Protein Homology CDS 541782 543122 . - 0 ID=cds-WP_037573446.1;Parent=gene-RM672_RS02815;Dbxref=GenBank:WP_037573446.1;Name=WP_037573446.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=RM672_RS02815;product=type I glutamate--ammonia ligase;protein_id=WP_037573446.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 543145 543510 . - . ID=gene-RM672_RS02820;Name=RM672_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02820;old_locus_tag=RM672_02820 NZ_JAVRJS010000001.1 Protein Homology CDS 543145 543510 . - 0 ID=cds-WP_037573443.1;Parent=gene-RM672_RS02820;Dbxref=GenBank:WP_037573443.1;Name=WP_037573443.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463893.1;locus_tag=RM672_RS02820;product=MerR family transcriptional regulator;protein_id=WP_037573443.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 543630 544868 . - . ID=gene-RM672_RS02825;Name=RM672_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02825;old_locus_tag=RM672_02825 NZ_JAVRJS010000001.1 Protein Homology CDS 543630 544868 . - 0 ID=cds-WP_311540602.1;Parent=gene-RM672_RS02825;Dbxref=GenBank:WP_311540602.1;Name=WP_311540602.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448823.1;locus_tag=RM672_RS02825;product=methionine gamma-lyase family protein;protein_id=WP_311540602.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 544883 546115 . - . ID=gene-RM672_RS02830;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=RM672_RS02830;old_locus_tag=RM672_02830 NZ_JAVRJS010000001.1 Protein Homology CDS 544883 546115 . - 0 ID=cds-WP_311540603.1;Parent=gene-RM672_RS02830;Dbxref=GenBank:WP_311540603.1;Name=WP_311540603.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381825.1;locus_tag=RM672_RS02830;product=GTPase HflX;protein_id=WP_311540603.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 546237 546710 . + . ID=gene-RM672_RS02835;Name=RM672_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02835;old_locus_tag=RM672_02835 NZ_JAVRJS010000001.1 Protein Homology CDS 546237 546710 . + 0 ID=cds-WP_103158841.1;Parent=gene-RM672_RS02835;Dbxref=GenBank:WP_103158841.1;Name=WP_103158841.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614023.1;locus_tag=RM672_RS02835;product=glutathione peroxidase;protein_id=WP_103158841.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 546833 547039 . - . ID=gene-RM672_RS02840;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=RM672_RS02840;old_locus_tag=RM672_02840 NZ_JAVRJS010000001.1 Protein Homology CDS 546833 547039 . - 0 ID=cds-WP_037573438.1;Parent=gene-RM672_RS02840;Dbxref=GenBank:WP_037573438.1;Name=WP_037573438.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=RM672_RS02840;product=RNA chaperone Hfq;protein_id=WP_037573438.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 547055 547990 . - . ID=gene-RM672_RS02845;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=RM672_RS02845;old_locus_tag=RM672_02845 NZ_JAVRJS010000001.1 Protein Homology CDS 547055 547990 . - 0 ID=cds-WP_103158855.1;Parent=gene-RM672_RS02845;Dbxref=GenBank:WP_103158855.1;Name=WP_103158855.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499812.1;locus_tag=RM672_RS02845;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_103158855.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 547992 548927 . - . ID=gene-RM672_RS02850;Name=RM672_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02850;old_locus_tag=RM672_02850 NZ_JAVRJS010000001.1 Protein Homology CDS 547992 548927 . - 0 ID=cds-WP_311540604.1;Parent=gene-RM672_RS02850;Dbxref=GenBank:WP_311540604.1;Name=WP_311540604.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=RM672_RS02850;product=alpha/beta hydrolase;protein_id=WP_311540604.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 549216 550889 . - . ID=gene-RM672_RS02855;Name=RM672_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02855;old_locus_tag=RM672_02855 NZ_JAVRJS010000001.1 Protein Homology CDS 549216 550889 . - 0 ID=cds-WP_037573436.1;Parent=gene-RM672_RS02855;Dbxref=GenBank:WP_037573436.1;Name=WP_037573436.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900199.1;locus_tag=RM672_RS02855;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_037573436.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 551013 552515 . - . ID=gene-RM672_RS02860;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=RM672_RS02860;old_locus_tag=RM672_02860 NZ_JAVRJS010000001.1 Protein Homology CDS 551013 552515 . - 0 ID=cds-WP_037573435.1;Parent=gene-RM672_RS02860;Dbxref=GenBank:WP_037573435.1;Name=WP_037573435.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176556.1;locus_tag=RM672_RS02860;product=glycerol kinase GlpK;protein_id=WP_037573435.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 552601 553416 . - . ID=gene-RM672_RS02865;Name=RM672_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02865;old_locus_tag=RM672_02865 NZ_JAVRJS010000001.1 Protein Homology CDS 552601 553416 . - 0 ID=cds-WP_103158844.1;Parent=gene-RM672_RS02865;Dbxref=GenBank:WP_103158844.1;Name=WP_103158844.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=RM672_RS02865;product=MIP/aquaporin family protein;protein_id=WP_103158844.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 553633 554661 . - . ID=gene-RM672_RS02870;Name=RM672_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02870;old_locus_tag=RM672_02870 NZ_JAVRJS010000001.1 Protein Homology CDS 553633 554661 . - 0 ID=cds-WP_308460853.1;Parent=gene-RM672_RS02870;Dbxref=GenBank:WP_308460853.1;Name=WP_308460853.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424955.1;locus_tag=RM672_RS02870;product=S66 family peptidase;protein_id=WP_308460853.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 554685 555218 . - . ID=gene-RM672_RS02875;Name=RM672_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02875;old_locus_tag=RM672_02875 NZ_JAVRJS010000001.1 Protein Homology CDS 554685 555218 . - 0 ID=cds-WP_105967280.1;Parent=gene-RM672_RS02875;Dbxref=GenBank:WP_105967280.1;Name=WP_105967280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=RM672_RS02875;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_105967280.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 555231 557222 . - . ID=gene-RM672_RS02880;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=RM672_RS02880;old_locus_tag=RM672_02880 NZ_JAVRJS010000001.1 Protein Homology CDS 555231 557222 . - 0 ID=cds-WP_105967279.1;Parent=gene-RM672_RS02880;Dbxref=GenBank:WP_105967279.1;Name=WP_105967279.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:NF000950.0;locus_tag=RM672_RS02880;product=DNA mismatch repair endonuclease MutL;protein_id=WP_105967279.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 557239 559836 . - . ID=gene-RM672_RS02885;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=RM672_RS02885;old_locus_tag=RM672_02885 NZ_JAVRJS010000001.1 Protein Homology CDS 557239 559836 . - 0 ID=cds-WP_311540606.1;Parent=gene-RM672_RS02885;Dbxref=GenBank:WP_311540606.1;Name=WP_311540606.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=RM672_RS02885;product=DNA mismatch repair protein MutS;protein_id=WP_311540606.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 559980 560483 . - . ID=gene-RM672_RS02890;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=RM672_RS02890;old_locus_tag=RM672_02890 NZ_JAVRJS010000001.1 Protein Homology CDS 559980 560483 . - 0 ID=cds-WP_107366138.1;Parent=gene-RM672_RS02890;Dbxref=GenBank:WP_107366138.1;Name=WP_107366138.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165435.1;locus_tag=RM672_RS02890;product=energy coupling factor transporter S component ThiW;protein_id=WP_107366138.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 560488 560868 . - . ID=gene-RM672_RS02895;Name=RM672_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02895;old_locus_tag=RM672_02895 NZ_JAVRJS010000001.1 Protein Homology CDS 560488 560868 . - 0 ID=cds-WP_311540607.1;Parent=gene-RM672_RS02895;Dbxref=GenBank:WP_311540607.1;Name=WP_311540607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=RM672_RS02895;product=YlbF family regulator;protein_id=WP_311540607.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 560868 562409 . - . ID=gene-RM672_RS02900;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=RM672_RS02900;old_locus_tag=RM672_02900 NZ_JAVRJS010000001.1 Protein Homology CDS 560868 562409 . - 0 ID=cds-WP_037573416.1;Parent=gene-RM672_RS02900;Dbxref=GenBank:WP_037573416.1;Name=WP_037573416.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167791.1;locus_tag=RM672_RS02900;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_037573416.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 562548 562844 . - . ID=gene-RM672_RS02905;Name=RM672_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02905;old_locus_tag=RM672_02905 NZ_JAVRJS010000001.1 Protein Homology CDS 562548 562844 . - 0 ID=cds-WP_037573414.1;Parent=gene-RM672_RS02905;Dbxref=GenBank:WP_037573414.1;Name=WP_037573414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453122.1;locus_tag=RM672_RS02905;product=thiamine-binding protein;protein_id=WP_037573414.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 562918 563784 . - . ID=gene-RM672_RS02910;Name=RM672_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02910;old_locus_tag=RM672_02910 NZ_JAVRJS010000001.1 Protein Homology CDS 562918 563784 . - 0 ID=cds-WP_037573413.1;Parent=gene-RM672_RS02910;Dbxref=GenBank:WP_037573413.1;Name=WP_037573413.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=RM672_RS02910;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_037573413.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 563785 565542 . - . ID=gene-RM672_RS02915;Name=RM672_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02915;old_locus_tag=RM672_02915 NZ_JAVRJS010000001.1 Protein Homology CDS 563785 565542 . - 0 ID=cds-WP_037573412.1;Parent=gene-RM672_RS02915;Dbxref=GenBank:WP_037573412.1;Name=WP_037573412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=RM672_RS02915;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_037573412.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 565655 566446 . - . ID=gene-RM672_RS02920;Name=RM672_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02920;old_locus_tag=RM672_02920 NZ_JAVRJS010000001.1 Protein Homology CDS 565655 566446 . - 0 ID=cds-WP_037573411.1;Parent=gene-RM672_RS02920;Dbxref=GenBank:WP_037573411.1;Name=WP_037573411.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275911.1;locus_tag=RM672_RS02920;product=TIGR00282 family metallophosphoesterase;protein_id=WP_037573411.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 566552 568693 . - . ID=gene-RM672_RS02925;Name=RM672_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02925;old_locus_tag=RM672_02925 NZ_JAVRJS010000001.1 Protein Homology CDS 566552 568693 . - 0 ID=cds-WP_037573410.1;Parent=gene-RM672_RS02925;Dbxref=GenBank:WP_037573410.1;Name=WP_037573410.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165442.1;locus_tag=RM672_RS02925;product=heavy metal translocating P-type ATPase;protein_id=WP_037573410.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 568671 569057 . - . ID=gene-RM672_RS02930;Name=RM672_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02930;old_locus_tag=RM672_02930 NZ_JAVRJS010000001.1 Protein Homology CDS 568671 569057 . - 0 ID=cds-WP_037573409.1;Parent=gene-RM672_RS02930;Dbxref=GenBank:WP_037573409.1;Name=WP_037573409.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=RM672_RS02930;product=ArsR/SmtB family transcription factor;protein_id=WP_037573409.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 569259 569477 . + . ID=gene-RM672_RS02935;Name=RM672_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02935;old_locus_tag=RM672_02935 NZ_JAVRJS010000001.1 Protein Homology CDS 569259 569477 . + 0 ID=cds-WP_037573959.1;Parent=gene-RM672_RS02935;Dbxref=GenBank:WP_037573959.1;Name=WP_037573959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483434.1;locus_tag=RM672_RS02935;product=hypothetical protein;protein_id=WP_037573959.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 569549 571108 . - . ID=gene-RM672_RS02940;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=RM672_RS02940;old_locus_tag=RM672_02940 NZ_JAVRJS010000001.1 Protein Homology CDS 569549 571108 . - 0 ID=cds-WP_107367223.1;Parent=gene-RM672_RS02940;Dbxref=GenBank:WP_107367223.1;Name=WP_107367223.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=RM672_RS02940;product=ribonuclease Y;protein_id=WP_107367223.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 571651 572694 . - . ID=gene-RM672_RS02945;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=RM672_RS02945;old_locus_tag=RM672_02945 NZ_JAVRJS010000001.1 Protein Homology CDS 571651 572694 . - 0 ID=cds-WP_311542455.1;Parent=gene-RM672_RS02945;Dbxref=GenBank:WP_311542455.1;Name=WP_311542455.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=RM672_RS02945;product=recombinase RecA;protein_id=WP_311542455.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 572857 574008 . - . ID=gene-RM672_RS02950;Name=RM672_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02950;old_locus_tag=RM672_02950 NZ_JAVRJS010000001.1 Protein Homology CDS 572857 574008 . - 0 ID=cds-WP_311540608.1;Parent=gene-RM672_RS02950;Dbxref=GenBank:WP_311540608.1;Name=WP_311540608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465812.1;locus_tag=RM672_RS02950;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_311540608.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 574115 574699 . - . ID=gene-RM672_RS02955;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=RM672_RS02955;old_locus_tag=RM672_02955 NZ_JAVRJS010000001.1 Protein Homology CDS 574115 574699 . - 0 ID=cds-WP_037573398.1;Parent=gene-RM672_RS02955;Dbxref=GenBank:WP_037573398.1;Name=WP_037573398.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=RM672_RS02955;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_037573398.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 574740 575135 . - . ID=gene-RM672_RS02960;Name=RM672_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02960;old_locus_tag=RM672_02960 NZ_JAVRJS010000001.1 Protein Homology CDS 574740 575135 . - 0 ID=cds-WP_037573396.1;Parent=gene-RM672_RS02960;Dbxref=GenBank:WP_037573396.1;Name=WP_037573396.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024805.7;locus_tag=RM672_RS02960;product=helix-turn-helix domain-containing protein;protein_id=WP_037573396.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 575148 576017 . - . ID=gene-RM672_RS02965;Name=RM672_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02965;old_locus_tag=RM672_02965 NZ_JAVRJS010000001.1 Protein Homology CDS 575148 576017 . - 0 ID=cds-WP_037573391.1;Parent=gene-RM672_RS02965;Dbxref=GenBank:WP_037573391.1;Name=WP_037573391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381771.1;locus_tag=RM672_RS02965;product=DUF3388 domain-containing protein;protein_id=WP_037573391.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 576069 576773 . - . ID=gene-RM672_RS02970;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=RM672_RS02970;old_locus_tag=RM672_02970 NZ_JAVRJS010000001.1 Protein Homology CDS 576069 576773 . - 0 ID=cds-WP_233654902.1;Parent=gene-RM672_RS02970;Dbxref=GenBank:WP_233654902.1;Name=WP_233654902.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165451.1;locus_tag=RM672_RS02970;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_233654902.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 576773 578059 . - . ID=gene-RM672_RS02975;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=RM672_RS02975;old_locus_tag=RM672_02975 NZ_JAVRJS010000001.1 Protein Homology CDS 576773 578059 . - 0 ID=cds-WP_233654903.1;Parent=gene-RM672_RS02975;Dbxref=GenBank:WP_233654903.1;Name=WP_233654903.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638356.1;locus_tag=RM672_RS02975;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_233654903.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 578052 579326 . - . ID=gene-RM672_RS02980;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=RM672_RS02980;old_locus_tag=RM672_02980 NZ_JAVRJS010000001.1 Protein Homology CDS 578052 579326 . - 0 ID=cds-WP_037573386.1;Parent=gene-RM672_RS02980;Dbxref=GenBank:WP_037573386.1;Name=WP_037573386.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=RM672_RS02980;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_037573386.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 579357 580073 . - . ID=gene-RM672_RS02985;Name=RM672_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02985;old_locus_tag=RM672_02985 NZ_JAVRJS010000001.1 Protein Homology CDS 579357 580073 . - 0 ID=cds-WP_037573385.1;Parent=gene-RM672_RS02985;Dbxref=GenBank:WP_037573385.1;Name=WP_037573385.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=RM672_RS02985;product=GntR family transcriptional regulator;protein_id=WP_037573385.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 580076 582427 . - . ID=gene-RM672_RS02990;Name=RM672_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS02990;old_locus_tag=RM672_02990 NZ_JAVRJS010000001.1 Protein Homology CDS 580076 582427 . - 0 ID=cds-WP_311542456.1;Parent=gene-RM672_RS02990;Dbxref=GenBank:WP_311542456.1;Name=WP_311542456.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480722.1;locus_tag=RM672_RS02990;product=DNA translocase FtsK;protein_id=WP_311542456.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 582660 584333 . - . ID=gene-RM672_RS02995;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=RM672_RS02995;old_locus_tag=RM672_02995 NZ_JAVRJS010000001.1 Protein Homology CDS 582660 584333 . - 0 ID=cds-WP_037573383.1;Parent=gene-RM672_RS02995;Dbxref=GenBank:WP_037573383.1;Name=WP_037573383.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=RM672_RS02995;product=ribonuclease J2;protein_id=WP_037573383.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 584641 585957 . - . ID=gene-RM672_RS03000;Name=RM672_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03000;old_locus_tag=RM672_03000 NZ_JAVRJS010000001.1 Protein Homology CDS 584641 585957 . - 0 ID=cds-WP_037573382.1;Parent=gene-RM672_RS03000;Dbxref=GenBank:WP_037573382.1;Name=WP_037573382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039646018.1;locus_tag=RM672_RS03000;product=M30 family zinc metallopeptidase;protein_id=WP_037573382.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 586235 588340 . - . ID=gene-RM672_RS03005;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=RM672_RS03005;old_locus_tag=RM672_03005 NZ_JAVRJS010000001.1 Protein Homology CDS 586235 588340 . - 0 ID=cds-WP_103159293.1;Parent=gene-RM672_RS03005;Dbxref=GenBank:WP_103159293.1;Name=WP_103159293.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900164.1;locus_tag=RM672_RS03005;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_103159293.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 588504 588773 . - . ID=gene-RM672_RS03010;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=RM672_RS03010;old_locus_tag=RM672_03010 NZ_JAVRJS010000001.1 Protein Homology CDS 588504 588773 . - 0 ID=cds-WP_037573379.1;Parent=gene-RM672_RS03010;Dbxref=GenBank:WP_037573379.1;Name=WP_037573379.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=RM672_RS03010;product=30S ribosomal protein S15;protein_id=WP_037573379.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 588877 589848 . - . ID=gene-RM672_RS03015;Name=RM672_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03015;old_locus_tag=RM672_03015 NZ_JAVRJS010000001.1 Protein Homology CDS 588877 589848 . - 0 ID=cds-WP_037573377.1;Parent=gene-RM672_RS03015;Dbxref=GenBank:WP_037573377.1;Name=WP_037573377.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009558826.1;locus_tag=RM672_RS03015;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_037573377.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 589863 590780 . - . ID=gene-RM672_RS03020;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=RM672_RS03020;old_locus_tag=RM672_03020 NZ_JAVRJS010000001.1 Protein Homology CDS 589863 590780 . - 0 ID=cds-WP_037573374.1;Parent=gene-RM672_RS03020;Dbxref=GenBank:WP_037573374.1;Name=WP_037573374.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=RM672_RS03020;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_037573374.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 590852 591196 . - . ID=gene-RM672_RS03025;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=RM672_RS03025;old_locus_tag=RM672_03025 NZ_JAVRJS010000001.1 Protein Homology CDS 590852 591196 . - 0 ID=cds-WP_037573372.1;Parent=gene-RM672_RS03025;Dbxref=GenBank:WP_037573372.1;Name=WP_037573372.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=RM672_RS03025;product=30S ribosome-binding factor RbfA;protein_id=WP_037573372.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 591296 591679 . - . ID=gene-RM672_RS03030;Name=RM672_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03030;old_locus_tag=RM672_03030 NZ_JAVRJS010000001.1 Protein Homology CDS 591296 591679 . - 0 ID=cds-WP_037573370.1;Parent=gene-RM672_RS03030;Dbxref=GenBank:WP_037573370.1;Name=WP_037573370.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480708.1;locus_tag=RM672_RS03030;product=VOC family protein;protein_id=WP_037573370.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 591876 594023 . - . ID=gene-RM672_RS03035;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=RM672_RS03035;old_locus_tag=RM672_03035 NZ_JAVRJS010000001.1 Protein Homology CDS 591876 594023 . - 0 ID=cds-WP_233654905.1;Parent=gene-RM672_RS03035;Dbxref=GenBank:WP_233654905.1;Name=WP_233654905.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=RM672_RS03035;product=translation initiation factor IF-2;protein_id=WP_233654905.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 594040 594345 . - . ID=gene-RM672_RS03040;Name=RM672_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03040;old_locus_tag=RM672_03040 NZ_JAVRJS010000001.1 Protein Homology CDS 594040 594345 . - 0 ID=cds-WP_037573366.1;Parent=gene-RM672_RS03040;Dbxref=GenBank:WP_037573366.1;Name=WP_037573366.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=RM672_RS03040;product=YlxQ family RNA-binding protein;protein_id=WP_037573366.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 594342 594629 . - . ID=gene-RM672_RS03045;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=RM672_RS03045;old_locus_tag=RM672_03045 NZ_JAVRJS010000001.1 Protein Homology CDS 594342 594629 . - 0 ID=cds-WP_037573364.1;Parent=gene-RM672_RS03045;Dbxref=GenBank:WP_037573364.1;Name=WP_037573364.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=RM672_RS03045;product=RNase P modulator RnpM;protein_id=WP_037573364.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq pseudogene 594800 595832 . - . ID=gene-RM672_RS03050;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=RM672_RS03050;old_locus_tag=RM672_03050;partial=true;pseudo=true;start_range=.,594800 NZ_JAVRJS010000001.1 Protein Homology CDS 594800 595832 . - 0 ID=cds-RM672_RS03050;Parent=gene-RM672_RS03050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499776.1;locus_tag=RM672_RS03050;partial=true;product=transcription termination factor NusA;pseudo=true;start_range=.,594800;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 595852 596319 . - . ID=gene-RM672_RS03055;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=RM672_RS03055;old_locus_tag=RM672_03055 NZ_JAVRJS010000001.1 Protein Homology CDS 595852 596319 . - 0 ID=cds-WP_103159289.1;Parent=gene-RM672_RS03055;Dbxref=GenBank:WP_103159289.1;Name=WP_103159289.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=RM672_RS03055;product=ribosome maturation factor RimP;protein_id=WP_103159289.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 596446 600756 . - . ID=gene-RM672_RS03060;Name=RM672_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03060;old_locus_tag=RM672_03060 NZ_JAVRJS010000001.1 Protein Homology CDS 596446 600756 . - 0 ID=cds-WP_233654906.1;Parent=gene-RM672_RS03060;Dbxref=GenBank:WP_233654906.1;Name=WP_233654906.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303258.1;locus_tag=RM672_RS03060;product=PolC-type DNA polymerase III;protein_id=WP_233654906.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 600954 602660 . - . ID=gene-RM672_RS03065;Name=RM672_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03065;old_locus_tag=RM672_03065 NZ_JAVRJS010000001.1 Protein Homology CDS 600954 602660 . - 0 ID=cds-WP_105965249.1;Parent=gene-RM672_RS03065;Dbxref=GenBank:WP_105965249.1;Name=WP_105965249.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453094.1;locus_tag=RM672_RS03065;product=proline--tRNA ligase;protein_id=WP_105965249.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 602688 603968 . - . ID=gene-RM672_RS03070;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=RM672_RS03070;old_locus_tag=RM672_03070 NZ_JAVRJS010000001.1 Protein Homology CDS 602688 603968 . - 0 ID=cds-WP_037573354.1;Parent=gene-RM672_RS03070;Dbxref=GenBank:WP_037573354.1;Name=WP_037573354.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=RM672_RS03070;product=RIP metalloprotease RseP;protein_id=WP_037573354.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 603975 605105 . - . ID=gene-RM672_RS03075;Name=RM672_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03075;old_locus_tag=RM672_03075 NZ_JAVRJS010000001.1 Protein Homology CDS 603975 605105 . - 0 ID=cds-WP_105965345.1;Parent=gene-RM672_RS03075;Dbxref=GenBank:WP_105965345.1;Name=WP_105965345.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381738.1;locus_tag=RM672_RS03075;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_105965345.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 605121 605900 . - . ID=gene-RM672_RS03080;Name=RM672_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03080;old_locus_tag=RM672_03080 NZ_JAVRJS010000001.1 Protein Homology CDS 605121 605900 . - 0 ID=cds-WP_037573352.1;Parent=gene-RM672_RS03080;Dbxref=GenBank:WP_037573352.1;Name=WP_037573352.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=RM672_RS03080;product=phosphatidate cytidylyltransferase;protein_id=WP_037573352.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 605914 606675 . - . ID=gene-RM672_RS03085;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=RM672_RS03085;old_locus_tag=RM672_03085 NZ_JAVRJS010000001.1 Protein Homology CDS 605914 606675 . - 0 ID=cds-WP_037573351.1;Parent=gene-RM672_RS03085;Dbxref=GenBank:WP_037573351.1;Name=WP_037573351.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=RM672_RS03085;product=undecaprenyl pyrophosphate synthase;protein_id=WP_037573351.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 606825 607379 . - . ID=gene-RM672_RS03090;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=RM672_RS03090;old_locus_tag=RM672_03090 NZ_JAVRJS010000001.1 Protein Homology CDS 606825 607379 . - 0 ID=cds-WP_037573344.1;Parent=gene-RM672_RS03090;Dbxref=GenBank:WP_037573344.1;Name=WP_037573344.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=RM672_RS03090;product=ribosome recycling factor;protein_id=WP_037573344.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 607399 608121 . - . ID=gene-RM672_RS03095;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=RM672_RS03095;old_locus_tag=RM672_03095 NZ_JAVRJS010000001.1 Protein Homology CDS 607399 608121 . - 0 ID=cds-WP_105965248.1;Parent=gene-RM672_RS03095;Dbxref=GenBank:WP_105965248.1;Name=WP_105965248.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=RM672_RS03095;product=UMP kinase;protein_id=WP_105965248.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 608275 609156 . - . ID=gene-RM672_RS03100;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=RM672_RS03100;old_locus_tag=RM672_03100 NZ_JAVRJS010000001.1 Protein Homology CDS 608275 609156 . - 0 ID=cds-WP_172458446.1;Parent=gene-RM672_RS03100;Dbxref=GenBank:WP_172458446.1;Name=WP_172458446.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499767.1;locus_tag=RM672_RS03100;product=translation elongation factor Ts;protein_id=WP_172458446.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 609371 610159 . - . ID=gene-RM672_RS03105;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=RM672_RS03105;old_locus_tag=RM672_03105 NZ_JAVRJS010000001.1 Protein Homology CDS 609371 610159 . - 0 ID=cds-WP_105962777.1;Parent=gene-RM672_RS03105;Dbxref=GenBank:WP_105962777.1;Name=WP_105962777.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=RM672_RS03105;product=30S ribosomal protein S2;protein_id=WP_105962777.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 610321 611094 . - . ID=gene-RM672_RS03110;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=RM672_RS03110;old_locus_tag=RM672_03110 NZ_JAVRJS010000001.1 Protein Homology CDS 610321 611094 . - 0 ID=cds-WP_037573333.1;Parent=gene-RM672_RS03110;Dbxref=GenBank:WP_037573333.1;Name=WP_037573333.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=RM672_RS03110;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_037573333.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 611109 612518 . - . ID=gene-RM672_RS03115;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=RM672_RS03115;old_locus_tag=RM672_03115 NZ_JAVRJS010000001.1 Protein Homology CDS 611109 612518 . - 0 ID=cds-WP_233654907.1;Parent=gene-RM672_RS03115;Dbxref=GenBank:WP_233654907.1;Name=WP_233654907.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=RM672_RS03115;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_233654907.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 612535 613077 . - . ID=gene-RM672_RS03120;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=RM672_RS03120;old_locus_tag=RM672_03120 NZ_JAVRJS010000001.1 Protein Homology CDS 612535 613077 . - 0 ID=cds-WP_311542457.1;Parent=gene-RM672_RS03120;Dbxref=GenBank:WP_311542457.1;Name=WP_311542457.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=RM672_RS03120;product=ATP-dependent protease subunit HslV;protein_id=WP_311542457.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 613083 613943 . - . ID=gene-RM672_RS03125;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=RM672_RS03125;old_locus_tag=RM672_03125 NZ_JAVRJS010000001.1 Protein Homology CDS 613083 613943 . - 0 ID=cds-WP_375712516.1;Parent=gene-RM672_RS03125;Dbxref=GenBank:WP_375712516.1;Name=WP_375712516.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464326.1;locus_tag=RM672_RS03125;product=tyrosine recombinase XerC;protein_id=WP_375712516.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 614095 615399 . - . ID=gene-RM672_RS03130;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=RM672_RS03130;old_locus_tag=RM672_03130 NZ_JAVRJS010000001.1 Protein Homology CDS 614095 615399 . - 0 ID=cds-WP_233654909.1;Parent=gene-RM672_RS03130;Dbxref=GenBank:WP_233654909.1;Name=WP_233654909.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=RM672_RS03130;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_233654909.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 615412 617481 . - . ID=gene-RM672_RS03135;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=RM672_RS03135;old_locus_tag=RM672_03135 NZ_JAVRJS010000001.1 Protein Homology CDS 615412 617481 . - 0 ID=cds-WP_037573320.1;Parent=gene-RM672_RS03135;Dbxref=GenBank:WP_037573320.1;Name=WP_037573320.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=RM672_RS03135;product=type I DNA topoisomerase;protein_id=WP_037573320.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 617577 618437 . - . ID=gene-RM672_RS03140;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=RM672_RS03140;old_locus_tag=RM672_03140 NZ_JAVRJS010000001.1 Protein Homology CDS 617577 618437 . - 0 ID=cds-WP_107363495.1;Parent=gene-RM672_RS03140;Dbxref=GenBank:WP_107363495.1;Name=WP_107363495.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167869.1;locus_tag=RM672_RS03140;product=DNA-processing protein DprA;protein_id=WP_107363495.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 618742 619650 . - . ID=gene-RM672_RS03145;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=RM672_RS03145;old_locus_tag=RM672_03145 NZ_JAVRJS010000001.1 Protein Homology CDS 618742 619650 . - 0 ID=cds-WP_037573316.1;Parent=gene-RM672_RS03145;Dbxref=GenBank:WP_037573316.1;Name=WP_037573316.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499754.1;locus_tag=RM672_RS03145;product=succinate--CoA ligase subunit alpha;protein_id=WP_037573316.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 619671 620837 . - . ID=gene-RM672_RS03150;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=RM672_RS03150;old_locus_tag=RM672_03150 NZ_JAVRJS010000001.1 Protein Homology CDS 619671 620837 . - 0 ID=cds-WP_107363474.1;Parent=gene-RM672_RS03150;Dbxref=GenBank:WP_107363474.1;Name=WP_107363474.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=RM672_RS03150;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_107363474.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 621062 621331 . - . ID=gene-RM672_RS03155;Name=RM672_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03155;old_locus_tag=RM672_03155 NZ_JAVRJS010000001.1 Protein Homology CDS 621062 621331 . - 0 ID=cds-WP_107363473.1;Parent=gene-RM672_RS03155;Dbxref=GenBank:WP_107363473.1;Name=WP_107363473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424899.1;locus_tag=RM672_RS03155;product=hypothetical protein;protein_id=WP_107363473.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 621410 622189 . - . ID=gene-RM672_RS03160;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=RM672_RS03160;old_locus_tag=RM672_03160 NZ_JAVRJS010000001.1 Protein Homology CDS 621410 622189 . - 0 ID=cds-WP_037573308.1;Parent=gene-RM672_RS03160;Dbxref=GenBank:WP_037573308.1;Name=WP_037573308.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=RM672_RS03160;product=ribonuclease HII;protein_id=WP_037573308.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 622170 623060 . - . ID=gene-RM672_RS03165;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=RM672_RS03165;old_locus_tag=RM672_03165 NZ_JAVRJS010000001.1 Protein Homology CDS 622170 623060 . - 0 ID=cds-WP_107363471.1;Parent=gene-RM672_RS03165;Dbxref=GenBank:WP_107363471.1;Name=WP_107363471.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448797.1;locus_tag=RM672_RS03165;product=ribosome biogenesis GTPase YlqF;protein_id=WP_107363471.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 623292 623654 . + . ID=gene-RM672_RS03170;Name=RM672_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03170;old_locus_tag=RM672_03170 NZ_JAVRJS010000001.1 Protein Homology CDS 623292 623654 . + 0 ID=cds-WP_037573953.1;Parent=gene-RM672_RS03170;Dbxref=GenBank:WP_037573953.1;Name=WP_037573953.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=RM672_RS03170;product=GtrA family protein;protein_id=WP_037573953.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 623673 626279 . + . ID=gene-RM672_RS03175;Name=RM672_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03175;old_locus_tag=RM672_03175 NZ_JAVRJS010000001.1 Protein Homology CDS 623673 626279 . + 0 ID=cds-WP_311541292.1;Parent=gene-RM672_RS03175;Dbxref=GenBank:WP_311541292.1;Name=WP_311541292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=RM672_RS03175;product=YfhO family protein;protein_id=WP_311541292.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 626276 628861 . + . ID=gene-RM672_RS03180;Name=RM672_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03180;old_locus_tag=RM672_03180 NZ_JAVRJS010000001.1 Protein Homology CDS 626276 628861 . + 0 ID=cds-WP_229717272.1;Parent=gene-RM672_RS03180;Dbxref=GenBank:WP_229717272.1;Name=WP_229717272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510970.1;locus_tag=RM672_RS03180;product=YfhO family protein;protein_id=WP_229717272.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 628916 629467 . - . ID=gene-RM672_RS03185;Name=RM672_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03185;old_locus_tag=RM672_03185 NZ_JAVRJS010000001.1 Protein Homology CDS 628916 629467 . - 0 ID=cds-WP_157946133.1;Parent=gene-RM672_RS03185;Dbxref=GenBank:WP_157946133.1;Name=WP_157946133.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: protein motif:HMM:NF013718.7;locus_tag=RM672_RS03185;product=phosphatase PAP2 family protein;protein_id=WP_157946133.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 629864 630214 . - . ID=gene-RM672_RS03190;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=RM672_RS03190;old_locus_tag=RM672_03190 NZ_JAVRJS010000001.1 Protein Homology CDS 629864 630214 . - 0 ID=cds-WP_037573298.1;Parent=gene-RM672_RS03190;Dbxref=GenBank:WP_037573298.1;Name=WP_037573298.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=RM672_RS03190;product=50S ribosomal protein L19;protein_id=WP_037573298.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 630316 631053 . - . ID=gene-RM672_RS03195;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=RM672_RS03195;old_locus_tag=RM672_03195 NZ_JAVRJS010000001.1 Protein Homology CDS 630316 631053 . - 0 ID=cds-WP_103159281.1;Parent=gene-RM672_RS03195;Dbxref=GenBank:WP_103159281.1;Name=WP_103159281.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=RM672_RS03195;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_103159281.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 631050 631553 . - . ID=gene-RM672_RS03200;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=RM672_RS03200;old_locus_tag=RM672_03200 NZ_JAVRJS010000001.1 Protein Homology CDS 631050 631553 . - 0 ID=cds-WP_311542458.1;Parent=gene-RM672_RS03200;Dbxref=GenBank:WP_311542458.1;Name=WP_311542458.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=RM672_RS03200;product=ribosome maturation factor RimM;protein_id=WP_311542458.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 631657 631932 . - . ID=gene-RM672_RS03205;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=RM672_RS03205;old_locus_tag=RM672_03205 NZ_JAVRJS010000001.1 Protein Homology CDS 631657 631932 . - 0 ID=cds-WP_037573289.1;Parent=gene-RM672_RS03205;Dbxref=GenBank:WP_037573289.1;Name=WP_037573289.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=RM672_RS03205;product=30S ribosomal protein S16;protein_id=WP_037573289.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 632177 633544 . - . ID=gene-RM672_RS03210;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=RM672_RS03210;old_locus_tag=RM672_03210 NZ_JAVRJS010000001.1 Protein Homology CDS 632177 633544 . - 0 ID=cds-WP_103159279.1;Parent=gene-RM672_RS03210;Dbxref=GenBank:WP_103159279.1;Name=WP_103159279.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=RM672_RS03210;product=signal recognition particle protein;protein_id=WP_103159279.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 633558 633890 . - . ID=gene-RM672_RS03215;Name=RM672_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03215;old_locus_tag=RM672_03215 NZ_JAVRJS010000001.1 Protein Homology CDS 633558 633890 . - 0 ID=cds-WP_037573283.1;Parent=gene-RM672_RS03215;Dbxref=GenBank:WP_037573283.1;Name=WP_037573283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473260.1;locus_tag=RM672_RS03215;product=putative DNA-binding protein;protein_id=WP_037573283.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 633877 635232 . - . ID=gene-RM672_RS03220;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=RM672_RS03220;old_locus_tag=RM672_03220 NZ_JAVRJS010000001.1 Protein Homology CDS 633877 635232 . - 0 ID=cds-WP_037573280.1;Parent=gene-RM672_RS03220;Dbxref=GenBank:WP_037573280.1;Name=WP_037573280.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365083.1;locus_tag=RM672_RS03220;product=signal recognition particle-docking protein FtsY;protein_id=WP_037573280.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 635233 638799 . - . ID=gene-RM672_RS03225;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=RM672_RS03225;old_locus_tag=RM672_03225 NZ_JAVRJS010000001.1 Protein Homology CDS 635233 638799 . - 0 ID=cds-WP_107360407.1;Parent=gene-RM672_RS03225;Dbxref=GenBank:WP_107360407.1;Name=WP_107360407.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729018.1;locus_tag=RM672_RS03225;product=chromosome segregation protein SMC;protein_id=WP_107360407.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 638803 639474 . - . ID=gene-RM672_RS03230;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=RM672_RS03230;old_locus_tag=RM672_03230 NZ_JAVRJS010000001.1 Protein Homology CDS 638803 639474 . - 0 ID=cds-WP_371874978.1;Parent=gene-RM672_RS03230;Dbxref=GenBank:WP_371874978.1;Name=WP_371874978.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480668.1;locus_tag=RM672_RS03230;product=ribonuclease III;protein_id=WP_371874978.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 639643 639876 . - . ID=gene-RM672_RS03235;Name=RM672_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03235;old_locus_tag=RM672_03235 NZ_JAVRJS010000001.1 Protein Homology CDS 639643 639876 . - 0 ID=cds-WP_019165520.1;Parent=gene-RM672_RS03235;Dbxref=GenBank:WP_019165520.1;Name=WP_019165520.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=RM672_RS03235;product=acyl carrier protein;protein_id=WP_019165520.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 640052 640789 . - . ID=gene-RM672_RS03240;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=RM672_RS03240;old_locus_tag=RM672_03240 NZ_JAVRJS010000001.1 Protein Homology CDS 640052 640789 . - 0 ID=cds-WP_103159277.1;Parent=gene-RM672_RS03240;Dbxref=GenBank:WP_103159277.1;Name=WP_103159277.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=RM672_RS03240;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_103159277.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 640782 641708 . - . ID=gene-RM672_RS03245;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=RM672_RS03245;old_locus_tag=RM672_03245 NZ_JAVRJS010000001.1 Protein Homology CDS 640782 641708 . - 0 ID=cds-WP_107360408.1;Parent=gene-RM672_RS03245;Dbxref=GenBank:WP_107360408.1;Name=WP_107360408.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489765.1;locus_tag=RM672_RS03245;product=ACP S-malonyltransferase;protein_id=WP_107360408.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 641701 642687 . - . ID=gene-RM672_RS03250;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=RM672_RS03250;old_locus_tag=RM672_03250 NZ_JAVRJS010000001.1 Protein Homology CDS 641701 642687 . - 0 ID=cds-WP_037573261.1;Parent=gene-RM672_RS03250;Dbxref=GenBank:WP_037573261.1;Name=WP_037573261.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450581.1;locus_tag=RM672_RS03250;product=phosphate acyltransferase PlsX;protein_id=WP_037573261.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 642680 643249 . - . ID=gene-RM672_RS03255;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=RM672_RS03255;old_locus_tag=RM672_03255 NZ_JAVRJS010000001.1 Protein Homology CDS 642680 643249 . - 0 ID=cds-WP_037573258.1;Parent=gene-RM672_RS03255;Dbxref=GenBank:WP_037573258.1;Name=WP_037573258.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174579.1;locus_tag=RM672_RS03255;product=transcription factor FapR;protein_id=WP_037573258.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 643337 643786 . - . ID=gene-RM672_RS03260;Name=RM672_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03260;old_locus_tag=RM672_03260 NZ_JAVRJS010000001.1 Protein Homology CDS 643337 643786 . - 0 ID=cds-WP_233654911.1;Parent=gene-RM672_RS03260;Dbxref=GenBank:WP_233654911.1;Name=WP_233654911.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF057839.1;locus_tag=RM672_RS03260;product=ASCH domain-containing protein;protein_id=WP_233654911.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 643937 645982 . - . ID=gene-RM672_RS03265;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=RM672_RS03265;old_locus_tag=RM672_03265 NZ_JAVRJS010000001.1 Protein Homology CDS 643937 645982 . - 0 ID=cds-WP_037573252.1;Parent=gene-RM672_RS03265;Dbxref=GenBank:WP_037573252.1;Name=WP_037573252.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=RM672_RS03265;product=ATP-dependent DNA helicase RecG;protein_id=WP_037573252.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 645984 646853 . - . ID=gene-RM672_RS03270;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM672_RS03270;old_locus_tag=RM672_03270 NZ_JAVRJS010000001.1 Protein Homology CDS 645984 646853 . - 0 ID=cds-WP_037573250.1;Parent=gene-RM672_RS03270;Dbxref=GenBank:WP_037573250.1;Name=WP_037573250.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=RM672_RS03270;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_037573250.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 646872 647537 . - . ID=gene-RM672_RS03275;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM672_RS03275;old_locus_tag=RM672_03275 NZ_JAVRJS010000001.1 Protein Homology CDS 646872 647537 . - 0 ID=cds-WP_037573246.1;Parent=gene-RM672_RS03275;Dbxref=GenBank:WP_037573246.1;Name=WP_037573246.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303291.1;locus_tag=RM672_RS03275;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_037573246.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 647695 649353 . - . ID=gene-RM672_RS03280;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=RM672_RS03280;old_locus_tag=RM672_03280 NZ_JAVRJS010000001.1 Protein Homology CDS 647695 649353 . - 0 ID=cds-WP_105962764.1;Parent=gene-RM672_RS03280;Dbxref=GenBank:WP_105962764.1;Name=WP_105962764.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446265.1;locus_tag=RM672_RS03280;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_105962764.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 649366 649740 . - . ID=gene-RM672_RS03285;Name=RM672_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03285;old_locus_tag=RM672_03285 NZ_JAVRJS010000001.1 Protein Homology CDS 649366 649740 . - 0 ID=cds-WP_037573243.1;Parent=gene-RM672_RS03285;Dbxref=GenBank:WP_037573243.1;Name=WP_037573243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=RM672_RS03285;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037573243.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 650147 650335 . + . ID=gene-RM672_RS03290;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=RM672_RS03290;old_locus_tag=RM672_03290 NZ_JAVRJS010000001.1 Protein Homology CDS 650147 650335 . + 0 ID=cds-WP_037564748.1;Parent=gene-RM672_RS03290;Dbxref=GenBank:WP_037564748.1;Name=WP_037564748.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=RM672_RS03290;product=50S ribosomal protein L28;protein_id=WP_037564748.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 650484 651119 . - . ID=gene-RM672_RS03295;Name=RM672_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03295;old_locus_tag=RM672_03295 NZ_JAVRJS010000001.1 Protein Homology CDS 650484 651119 . - 0 ID=cds-WP_105965241.1;Parent=gene-RM672_RS03295;Dbxref=GenBank:WP_105965241.1;Name=WP_105965241.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424872.1;locus_tag=RM672_RS03295;product=thiamine diphosphokinase;protein_id=WP_105965241.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 651123 651773 . - . ID=gene-RM672_RS03300;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=RM672_RS03300;old_locus_tag=RM672_03300 NZ_JAVRJS010000001.1 Protein Homology CDS 651123 651773 . - 0 ID=cds-WP_037573241.1;Parent=gene-RM672_RS03300;Dbxref=GenBank:WP_037573241.1;Name=WP_037573241.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=RM672_RS03300;product=ribulose-phosphate 3-epimerase;protein_id=WP_037573241.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 651773 652648 . - . ID=gene-RM672_RS03305;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=RM672_RS03305;old_locus_tag=RM672_03305 NZ_JAVRJS010000001.1 Protein Homology CDS 651773 652648 . - 0 ID=cds-WP_105962763.1;Parent=gene-RM672_RS03305;Dbxref=GenBank:WP_105962763.1;Name=WP_105962763.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=RM672_RS03305;product=ribosome small subunit-dependent GTPase A;protein_id=WP_105962763.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 652910 654187 . - . ID=gene-RM672_RS03310;Name=RM672_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03310;old_locus_tag=RM672_03310 NZ_JAVRJS010000001.1 Protein Homology CDS 652910 654187 . - 0 ID=cds-WP_037573237.1;Parent=gene-RM672_RS03310;Dbxref=GenBank:WP_037573237.1;Name=WP_037573237.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911561.1;locus_tag=RM672_RS03310;product=cytochrome P450;protein_id=WP_037573237.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 654367 656370 . - . ID=gene-RM672_RS03315;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=RM672_RS03315;old_locus_tag=RM672_03315 NZ_JAVRJS010000001.1 Protein Homology CDS 654367 656370 . - 0 ID=cds-WP_105965240.1;Parent=gene-RM672_RS03315;Dbxref=GenBank:WP_105965240.1;Name=WP_105965240.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165532.1;locus_tag=RM672_RS03315;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_105965240.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 656367 657110 . - . ID=gene-RM672_RS03320;Name=RM672_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03320;old_locus_tag=RM672_03320 NZ_JAVRJS010000001.1 Protein Homology CDS 656367 657110 . - 0 ID=cds-WP_037573232.1;Parent=gene-RM672_RS03320;Dbxref=GenBank:WP_037573232.1;Name=WP_037573232.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=RM672_RS03320;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_037573232.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 657116 658210 . - . ID=gene-RM672_RS03325;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=RM672_RS03325;old_locus_tag=RM672_03325 NZ_JAVRJS010000001.1 Protein Homology CDS 657116 658210 . - 0 ID=cds-WP_037573228.1;Parent=gene-RM672_RS03325;Dbxref=GenBank:WP_037573228.1;Name=WP_037573228.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=RM672_RS03325;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_037573228.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 658207 659517 . - . ID=gene-RM672_RS03330;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=RM672_RS03330;old_locus_tag=RM672_03330 NZ_JAVRJS010000001.1 Protein Homology CDS 658207 659517 . - 0 ID=cds-WP_105965238.1;Parent=gene-RM672_RS03330;Dbxref=GenBank:WP_105965238.1;Name=WP_105965238.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478311.1;locus_tag=RM672_RS03330;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_105965238.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 659518 660456 . - . ID=gene-RM672_RS03335;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=RM672_RS03335;old_locus_tag=RM672_03335 NZ_JAVRJS010000001.1 Protein Homology CDS 659518 660456 . - 0 ID=cds-WP_037573223.1;Parent=gene-RM672_RS03335;Dbxref=GenBank:WP_037573223.1;Name=WP_037573223.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507902.1;locus_tag=RM672_RS03335;product=methionyl-tRNA formyltransferase;protein_id=WP_037573223.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 660443 660931 . - . ID=gene-RM672_RS03340;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM672_RS03340;old_locus_tag=RM672_03340 NZ_JAVRJS010000001.1 Protein Homology CDS 660443 660931 . - 0 ID=cds-WP_105962759.1;Parent=gene-RM672_RS03340;Dbxref=GenBank:WP_105962759.1;Name=WP_105962759.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493109.1;locus_tag=RM672_RS03340;product=peptide deformylase;protein_id=WP_105962759.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 661300 663717 . - . ID=gene-RM672_RS03345;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=RM672_RS03345;old_locus_tag=RM672_03345 NZ_JAVRJS010000001.1 Protein Homology CDS 661300 663717 . - 0 ID=cds-WP_233654913.1;Parent=gene-RM672_RS03345;Dbxref=GenBank:WP_233654913.1;Name=WP_233654913.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813047.1;locus_tag=RM672_RS03345;product=primosomal protein N';protein_id=WP_233654913.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 663708 664928 . - . ID=gene-RM672_RS03350;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=RM672_RS03350;old_locus_tag=RM672_03350 NZ_JAVRJS010000001.1 Protein Homology CDS 663708 664928 . - 0 ID=cds-WP_107363453.1;Parent=gene-RM672_RS03350;Dbxref=GenBank:WP_107363453.1;Name=WP_107363453.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483516.1;locus_tag=RM672_RS03350;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_107363453.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 665107 665316 . - . ID=gene-RM672_RS03355;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=RM672_RS03355;old_locus_tag=RM672_03355 NZ_JAVRJS010000001.1 Protein Homology CDS 665107 665316 . - 0 ID=cds-WP_037573213.1;Parent=gene-RM672_RS03355;Dbxref=GenBank:WP_037573213.1;Name=WP_037573213.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=RM672_RS03355;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_037573213.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 665316 665939 . - . ID=gene-RM672_RS03360;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=RM672_RS03360;old_locus_tag=RM672_03360 NZ_JAVRJS010000001.1 Protein Homology CDS 665316 665939 . - 0 ID=cds-WP_037573210.1;Parent=gene-RM672_RS03360;Dbxref=GenBank:WP_037573210.1;Name=WP_037573210.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=RM672_RS03360;product=guanylate kinase;protein_id=WP_037573210.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 666101 667801 . + . ID=gene-RM672_RS03365;Name=RM672_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03365;old_locus_tag=RM672_03365 NZ_JAVRJS010000001.1 Protein Homology CDS 666101 667801 . + 0 ID=cds-WP_311540611.1;Parent=gene-RM672_RS03365;Dbxref=GenBank:WP_311540611.1;Name=WP_311540611.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167388.1;locus_tag=RM672_RS03365;product=Rqc2 family fibronectin-binding protein;protein_id=WP_311540611.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 667817 668230 . - . ID=gene-RM672_RS03370;Name=RM672_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03370;old_locus_tag=RM672_03370 NZ_JAVRJS010000001.1 Protein Homology CDS 667817 668230 . - 0 ID=cds-WP_233654915.1;Parent=gene-RM672_RS03370;Dbxref=GenBank:WP_233654915.1;Name=WP_233654915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=RM672_RS03370;product=VOC family protein;protein_id=WP_233654915.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 668574 669182 . - . ID=gene-RM672_RS03375;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=RM672_RS03375;old_locus_tag=RM672_03375 NZ_JAVRJS010000001.1 Protein Homology CDS 668574 669182 . - 0 ID=cds-WP_037573202.1;Parent=gene-RM672_RS03375;Dbxref=GenBank:WP_037573202.1;Name=WP_037573202.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=RM672_RS03375;product=orotate phosphoribosyltransferase;protein_id=WP_037573202.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 669182 669874 . - . ID=gene-RM672_RS03380;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=RM672_RS03380;old_locus_tag=RM672_03380 NZ_JAVRJS010000001.1 Protein Homology CDS 669182 669874 . - 0 ID=cds-WP_037573200.1;Parent=gene-RM672_RS03380;Dbxref=GenBank:WP_037573200.1;Name=WP_037573200.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381639.1;locus_tag=RM672_RS03380;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_037573200.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 669878 670795 . - . ID=gene-RM672_RS03385;Name=RM672_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03385;old_locus_tag=RM672_03385 NZ_JAVRJS010000001.1 Protein Homology CDS 669878 670795 . - 0 ID=cds-WP_105962753.1;Parent=gene-RM672_RS03385;Dbxref=GenBank:WP_105962753.1;Name=WP_105962753.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=RM672_RS03385;product=dihydroorotate dehydrogenase;protein_id=WP_105962753.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 670792 671556 . - . ID=gene-RM672_RS03390;Name=RM672_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03390;old_locus_tag=RM672_03390 NZ_JAVRJS010000001.1 Protein Homology CDS 670792 671556 . - 0 ID=cds-WP_037573197.1;Parent=gene-RM672_RS03390;Dbxref=GenBank:WP_037573197.1;Name=WP_037573197.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=RM672_RS03390;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_037573197.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 671569 674742 . - . ID=gene-RM672_RS03395;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=RM672_RS03395;old_locus_tag=RM672_03395 NZ_JAVRJS010000001.1 Protein Homology CDS 671569 674742 . - 0 ID=cds-WP_103159270.1;Parent=gene-RM672_RS03395;Dbxref=GenBank:WP_103159270.1;Name=WP_103159270.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=RM672_RS03395;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_103159270.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 674735 675835 . - . ID=gene-RM672_RS03400;Name=RM672_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03400;old_locus_tag=RM672_03400 NZ_JAVRJS010000001.1 Protein Homology CDS 674735 675835 . - 0 ID=cds-WP_233654916.1;Parent=gene-RM672_RS03400;Dbxref=GenBank:WP_233654916.1;Name=WP_233654916.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167399.1;locus_tag=RM672_RS03400;product=carbamoyl phosphate synthase small subunit;protein_id=WP_233654916.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 675835 677109 . - . ID=gene-RM672_RS03405;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=RM672_RS03405;old_locus_tag=RM672_03405 NZ_JAVRJS010000001.1 Protein Homology CDS 675835 677109 . - 0 ID=cds-WP_105962751.1;Parent=gene-RM672_RS03405;Dbxref=GenBank:WP_105962751.1;Name=WP_105962751.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=RM672_RS03405;product=dihydroorotase;protein_id=WP_105962751.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 677123 677998 . - . ID=gene-RM672_RS03410;Name=RM672_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03410;old_locus_tag=RM672_03410 NZ_JAVRJS010000001.1 Protein Homology CDS 677123 677998 . - 0 ID=cds-WP_233654921.1;Parent=gene-RM672_RS03410;Dbxref=GenBank:WP_233654921.1;Name=WP_233654921.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016173.1;locus_tag=RM672_RS03410;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_233654921.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 678018 679310 . - . ID=gene-RM672_RS03415;Name=RM672_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03415;old_locus_tag=RM672_03415 NZ_JAVRJS010000001.1 Protein Homology CDS 678018 679310 . - 0 ID=cds-WP_103159266.1;Parent=gene-RM672_RS03415;Dbxref=GenBank:WP_103159266.1;Name=WP_103159266.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637156.1;locus_tag=RM672_RS03415;product=uracil-xanthine permease family protein;protein_id=WP_103159266.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 679472 679996 . - . ID=gene-RM672_RS03420;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=RM672_RS03420;old_locus_tag=RM672_03420 NZ_JAVRJS010000001.1 Protein Homology CDS 679472 679996 . - 0 ID=cds-WP_037573946.1;Parent=gene-RM672_RS03420;Dbxref=GenBank:WP_037573946.1;Name=WP_037573946.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303315.1;locus_tag=RM672_RS03420;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_037573946.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 680291 681208 . - . ID=gene-RM672_RS03425;Name=RM672_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03425;old_locus_tag=RM672_03425 NZ_JAVRJS010000001.1 Protein Homology CDS 680291 681208 . - 0 ID=cds-WP_037573189.1;Parent=gene-RM672_RS03425;Dbxref=GenBank:WP_037573189.1;Name=WP_037573189.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448828.1;locus_tag=RM672_RS03425;product=RluA family pseudouridine synthase;protein_id=WP_037573189.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 681218 681697 . - . ID=gene-RM672_RS03430;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=RM672_RS03430;old_locus_tag=RM672_03430 NZ_JAVRJS010000001.1 Protein Homology CDS 681218 681697 . - 0 ID=cds-WP_037573187.1;Parent=gene-RM672_RS03430;Dbxref=GenBank:WP_037573187.1;Name=WP_037573187.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=RM672_RS03430;product=signal peptidase II;protein_id=WP_037573187.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 681817 682023 . - . ID=gene-RM672_RS03435;Name=RM672_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03435;old_locus_tag=RM672_03435 NZ_JAVRJS010000001.1 GeneMarkS-2+ CDS 681817 682023 . - 0 ID=cds-WP_037573185.1;Parent=gene-RM672_RS03435;Dbxref=GenBank:WP_037573185.1;Name=WP_037573185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS03435;product=hypothetical protein;protein_id=WP_037573185.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 682315 685062 . - . ID=gene-RM672_RS03440;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=RM672_RS03440;old_locus_tag=RM672_03440 NZ_JAVRJS010000001.1 Protein Homology CDS 682315 685062 . - 0 ID=cds-WP_311541294.1;Parent=gene-RM672_RS03440;Dbxref=GenBank:WP_311541294.1;Name=WP_311541294.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=RM672_RS03440;product=isoleucine--tRNA ligase;protein_id=WP_311541294.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 685252 685887 . - . ID=gene-RM672_RS03445;Name=RM672_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03445;old_locus_tag=RM672_03445 NZ_JAVRJS010000001.1 Protein Homology CDS 685252 685887 . - 0 ID=cds-WP_037573181.1;Parent=gene-RM672_RS03445;Dbxref=GenBank:WP_037573181.1;Name=WP_037573181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480602.1;locus_tag=RM672_RS03445;product=DivIVA domain-containing protein;protein_id=WP_037573181.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 685911 686681 . - . ID=gene-RM672_RS03450;Name=RM672_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03450;old_locus_tag=RM672_03450 NZ_JAVRJS010000001.1 Protein Homology CDS 685911 686681 . - 0 ID=cds-WP_107363449.1;Parent=gene-RM672_RS03450;Dbxref=GenBank:WP_107363449.1;Name=WP_107363449.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=RM672_RS03450;product=YlmH family RNA-binding protein;protein_id=WP_107363449.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 686852 687145 . - . ID=gene-RM672_RS03455;Name=RM672_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03455;old_locus_tag=RM672_03455 NZ_JAVRJS010000001.1 Protein Homology CDS 686852 687145 . - 0 ID=cds-WP_037573179.1;Parent=gene-RM672_RS03455;Dbxref=GenBank:WP_037573179.1;Name=WP_037573179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=RM672_RS03455;product=YggT family protein;protein_id=WP_037573179.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 687157 687765 . - . ID=gene-RM672_RS03460;Name=RM672_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03460;old_locus_tag=RM672_03460 NZ_JAVRJS010000001.1 Protein Homology CDS 687157 687765 . - 0 ID=cds-WP_037573178.1;Parent=gene-RM672_RS03460;Dbxref=GenBank:WP_037573178.1;Name=WP_037573178.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483538.1;locus_tag=RM672_RS03460;product=cell division protein SepF;protein_id=WP_037573178.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 687771 688445 . - . ID=gene-RM672_RS03465;Name=RM672_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03465;old_locus_tag=RM672_03465 NZ_JAVRJS010000001.1 Protein Homology CDS 687771 688445 . - 0 ID=cds-WP_105965231.1;Parent=gene-RM672_RS03465;Dbxref=GenBank:WP_105965231.1;Name=WP_105965231.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174546.1;locus_tag=RM672_RS03465;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_105965231.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 688471 689262 . - . ID=gene-RM672_RS03470;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=RM672_RS03470;old_locus_tag=RM672_03470 NZ_JAVRJS010000001.1 Protein Homology CDS 688471 689262 . - 0 ID=cds-WP_037573175.1;Parent=gene-RM672_RS03470;Dbxref=GenBank:WP_037573175.1;Name=WP_037573175.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=RM672_RS03470;product=peptidoglycan editing factor PgeF;protein_id=WP_037573175.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 689423 690598 . - . ID=gene-RM672_RS03475;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=RM672_RS03475;old_locus_tag=RM672_03475 NZ_JAVRJS010000001.1 Protein Homology CDS 689423 690598 . - 0 ID=cds-WP_037573172.1;Parent=gene-RM672_RS03475;Dbxref=GenBank:WP_037573172.1;Name=WP_037573172.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435258.1;locus_tag=RM672_RS03475;product=cell division protein FtsZ;protein_id=WP_037573172.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 690628 692067 . - . ID=gene-RM672_RS03480;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=RM672_RS03480;old_locus_tag=RM672_03480 NZ_JAVRJS010000001.1 Protein Homology CDS 690628 692067 . - 0 ID=cds-WP_105965230.1;Parent=gene-RM672_RS03480;Dbxref=GenBank:WP_105965230.1;Name=WP_105965230.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=RM672_RS03480;product=cell division protein FtsA;protein_id=WP_105965230.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 692174 693061 . - . ID=gene-RM672_RS03485;Name=RM672_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03485;old_locus_tag=RM672_03485 NZ_JAVRJS010000001.1 Protein Homology CDS 692174 693061 . - 0 ID=cds-WP_037573166.1;Parent=gene-RM672_RS03485;Dbxref=GenBank:WP_037573166.1;Name=WP_037573166.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169112.1;locus_tag=RM672_RS03485;product=cell division protein FtsQ/DivIB;protein_id=WP_037573166.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 693076 694425 . - . ID=gene-RM672_RS03490;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=RM672_RS03490;old_locus_tag=RM672_03490 NZ_JAVRJS010000001.1 Protein Homology CDS 693076 694425 . - 0 ID=cds-WP_037573164.1;Parent=gene-RM672_RS03490;Dbxref=GenBank:WP_037573164.1;Name=WP_037573164.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=RM672_RS03490;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_037573164.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 694426 695391 . - . ID=gene-RM672_RS03495;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=RM672_RS03495;old_locus_tag=RM672_03495 NZ_JAVRJS010000001.1 Protein Homology CDS 694426 695391 . - 0 ID=cds-WP_105962741.1;Parent=gene-RM672_RS03495;Dbxref=GenBank:WP_105962741.1;Name=WP_105962741.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728992.1;locus_tag=RM672_RS03495;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_105962741.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 695560 697701 . - . ID=gene-RM672_RS03500;Name=RM672_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03500;old_locus_tag=RM672_03500 NZ_JAVRJS010000001.1 Protein Homology CDS 695560 697701 . - 0 ID=cds-WP_105965229.1;Parent=gene-RM672_RS03500;Dbxref=GenBank:WP_105965229.1;Name=WP_105965229.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365102.1;locus_tag=RM672_RS03500;product=penicillin-binding protein;protein_id=WP_105965229.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 697682 698101 . - . ID=gene-RM672_RS03505;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=RM672_RS03505;old_locus_tag=RM672_03505 NZ_JAVRJS010000001.1 Protein Homology CDS 697682 698101 . - 0 ID=cds-WP_105962739.1;Parent=gene-RM672_RS03505;Dbxref=GenBank:WP_105962739.1;Name=WP_105962739.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169116.1;locus_tag=RM672_RS03505;product=cell division protein FtsL;protein_id=WP_105962739.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 698119 699054 . - . ID=gene-RM672_RS03510;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=RM672_RS03510;old_locus_tag=RM672_03510 NZ_JAVRJS010000001.1 Protein Homology CDS 698119 699054 . - 0 ID=cds-WP_105965342.1;Parent=gene-RM672_RS03510;Dbxref=GenBank:WP_105965342.1;Name=WP_105965342.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=RM672_RS03510;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_105965342.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 699086 699517 . - . ID=gene-RM672_RS03515;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=RM672_RS03515;old_locus_tag=RM672_03515 NZ_JAVRJS010000001.1 Protein Homology CDS 699086 699517 . - 0 ID=cds-WP_037573151.1;Parent=gene-RM672_RS03515;Dbxref=GenBank:WP_037573151.1;Name=WP_037573151.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=RM672_RS03515;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_037573151.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 699662 701275 . - . ID=gene-RM672_RS03520;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=RM672_RS03520;old_locus_tag=RM672_03520 NZ_JAVRJS010000001.1 Protein Homology CDS 699662 701275 . - 0 ID=cds-WP_105962738.1;Parent=gene-RM672_RS03520;Dbxref=GenBank:WP_105962738.1;Name=WP_105962738.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483550.1;locus_tag=RM672_RS03520;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_105962738.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 701699 702154 . + . ID=gene-RM672_RS03525;Name=RM672_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03525;old_locus_tag=RM672_03525 NZ_JAVRJS010000001.1 Protein Homology CDS 701699 702154 . + 0 ID=cds-WP_037573146.1;Parent=gene-RM672_RS03525;Dbxref=GenBank:WP_037573146.1;Name=WP_037573146.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424818.1;locus_tag=RM672_RS03525;product=N-acetyltransferase;protein_id=WP_037573146.1;transl_table=11 NZ_JAVRJS010000001.1 RefSeq gene 702476 702607 . - . ID=gene-RM672_RS03530;Name=RM672_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03530;old_locus_tag=RM672_03530 NZ_JAVRJS010000001.1 Protein Homology CDS 702476 702607 . - 0 ID=cds-WP_069191677.1;Parent=gene-RM672_RS03530;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM672_RS03530;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 ##sequence-region NZ_JAVRJS010000020.1 1 1099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000020.1 RefSeq region 1 1099 . + . ID=NZ_JAVRJS010000020.1:1..1099;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000020.1 RefSeq gene 1 579 . + . ID=gene-RM672_RS11370;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM672_RS11370;old_locus_tag=RM672_11365;partial=true;start_range=.,1 NZ_JAVRJS010000020.1 Protein Homology CDS 1 579 . + 0 ID=cds-WP_107522651.1;Parent=gene-RM672_RS11370;Dbxref=GenBank:WP_107522651.1;Name=WP_107522651.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500856.1;locus_tag=RM672_RS11370;partial=true;product=deoxyribose-phosphate aldolase;protein_id=WP_107522651.1;start_range=.,1;transl_table=11 NZ_JAVRJS010000020.1 RefSeq pseudogene 615 1099 . + . ID=gene-RM672_RS11375;Name=RM672_RS11375;end_range=1099,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11375;old_locus_tag=RM672_11370;partial=true;pseudo=true NZ_JAVRJS010000020.1 Protein Homology CDS 615 1099 . + 0 ID=cds-RM672_RS11375;Parent=gene-RM672_RS11375;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1099,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425881.1;locus_tag=RM672_RS11375;partial=true;product=phosphopentomutase;pseudo=true;transl_table=11 ##sequence-region NZ_JAVRJS010000021.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000021.1 RefSeq region 1 514 . + . ID=NZ_JAVRJS010000021.1:1..514;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000021.1 RefSeq gene 1 455 . + . ID=gene-RM672_RS11380;Name=RM672_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11380;old_locus_tag=RM672_11375;partial=true;start_range=.,1 NZ_JAVRJS010000021.1 Protein Homology CDS 1 455 . + 2 ID=cds-WP_311541202.1;Parent=gene-RM672_RS11380;Dbxref=GenBank:WP_311541202.1;Name=WP_311541202.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM672_RS11380;partial=true;product=IS6-like element IS257 family transposase;protein_id=WP_311541202.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJS010000002.1 1 533686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000002.1 RefSeq region 1 533686 . + . ID=NZ_JAVRJS010000002.1:1..533686;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000002.1 RefSeq gene 97 228 . - . ID=gene-RM672_RS03535;Name=RM672_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03535;old_locus_tag=RM672_03535 NZ_JAVRJS010000002.1 Protein Homology CDS 97 228 . - 0 ID=cds-WP_069191677.1-2;Parent=gene-RM672_RS03535;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM672_RS03535;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 293 424 . - . ID=gene-RM672_RS03540;Name=RM672_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03540;old_locus_tag=RM672_03540 NZ_JAVRJS010000002.1 Protein Homology CDS 293 424 . - 0 ID=cds-WP_069191677.1-3;Parent=gene-RM672_RS03540;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM672_RS03540;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 889 963 . + . ID=gene-RM672_RS11405;Name=RM672_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11405 NZ_JAVRJS010000002.1 Protein Homology CDS 889 963 . + 0 ID=cds-WP_107359458.1;Parent=gene-RM672_RS11405;Dbxref=GenBank:WP_107359458.1;Name=WP_107359458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=RM672_RS11405;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_107359458.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 1167 2471 . + . ID=gene-RM672_RS03545;Name=RM672_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03545;old_locus_tag=RM672_03545 NZ_JAVRJS010000002.1 Protein Homology CDS 1167 2471 . + 0 ID=cds-WP_037573144.1;Parent=gene-RM672_RS03545;Dbxref=GenBank:WP_037573144.1;Name=WP_037573144.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=RM672_RS03545;product=TrkH family potassium uptake protein;protein_id=WP_037573144.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 2521 2967 . - . ID=gene-RM672_RS03550;Name=RM672_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03550;old_locus_tag=RM672_03550 NZ_JAVRJS010000002.1 Protein Homology CDS 2521 2967 . - 0 ID=cds-WP_233654924.1;Parent=gene-RM672_RS03550;Dbxref=GenBank:WP_233654924.1;Name=WP_233654924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900028.1;locus_tag=RM672_RS03550;product=VOC family protein;protein_id=WP_233654924.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 3154 3600 . + . ID=gene-RM672_RS03555;Name=RM672_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03555;old_locus_tag=RM672_03555 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 3154 3600 . + 0 ID=cds-WP_145401052.1;Parent=gene-RM672_RS03555;Dbxref=GenBank:WP_145401052.1;Name=WP_145401052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS03555;product=hypothetical protein;protein_id=WP_145401052.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 5401 5474 . - . ID=gene-RM672_RS03560;Name=RM672_RS03560;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS03560;old_locus_tag=RM672_03560 NZ_JAVRJS010000002.1 tRNAscan-SE tRNA 5401 5474 . - . ID=rna-RM672_RS03560;Parent=gene-RM672_RS03560;anticodon=(pos:complement(5438..5440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS03560;product=tRNA-Arg NZ_JAVRJS010000002.1 tRNAscan-SE exon 5401 5474 . - . ID=exon-RM672_RS03560-1;Parent=rna-RM672_RS03560;anticodon=(pos:complement(5438..5440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS03560;product=tRNA-Arg NZ_JAVRJS010000002.1 RefSeq gene 5836 7083 . + . ID=gene-RM672_RS03565;Name=RM672_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03565;old_locus_tag=RM672_03565 NZ_JAVRJS010000002.1 Protein Homology CDS 5836 7083 . + 0 ID=cds-WP_037573137.1;Parent=gene-RM672_RS03565;Dbxref=GenBank:WP_037573137.1;Name=WP_037573137.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275952.1;locus_tag=RM672_RS03565;product=aminoacyltransferase;protein_id=WP_037573137.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 7237 8094 . - . ID=gene-RM672_RS03570;Name=RM672_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03570;old_locus_tag=RM672_03570 NZ_JAVRJS010000002.1 Protein Homology CDS 7237 8094 . - 0 ID=cds-WP_311541297.1;Parent=gene-RM672_RS03570;Dbxref=GenBank:WP_311541297.1;Name=WP_311541297.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.8;locus_tag=RM672_RS03570;product=M23 family metallopeptidase;protein_id=WP_311541297.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 8393 8755 . + . ID=gene-RM672_RS03575;Name=RM672_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03575;old_locus_tag=RM672_03575 NZ_JAVRJS010000002.1 Protein Homology CDS 8393 8755 . + 0 ID=cds-WP_051604953.1;Parent=gene-RM672_RS03575;Dbxref=GenBank:WP_051604953.1;Name=WP_051604953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022980.7;locus_tag=RM672_RS03575;product=complement inhibitor SCIN family protein;protein_id=WP_051604953.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 9060 9365 . + . ID=gene-RM672_RS03580;Name=RM672_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03580;old_locus_tag=RM672_03580 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 9060 9365 . + 0 ID=cds-WP_037571624.1;Parent=gene-RM672_RS03580;Dbxref=GenBank:WP_037571624.1;Name=WP_037571624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS03580;product=hypothetical protein;protein_id=WP_037571624.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 9603 10106 . - . ID=gene-RM672_RS03585;Name=RM672_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03585;old_locus_tag=RM672_03585 NZ_JAVRJS010000002.1 Protein Homology CDS 9603 10106 . - 0 ID=cds-WP_233654991.1;Parent=gene-RM672_RS03585;Dbxref=GenBank:WP_233654991.1;Name=WP_233654991.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435133.1;locus_tag=RM672_RS03585;product=YfcE family phosphodiesterase;protein_id=WP_233654991.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 10103 10687 . - . ID=gene-RM672_RS03590;Name=RM672_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03590;old_locus_tag=RM672_03590 NZ_JAVRJS010000002.1 Protein Homology CDS 10103 10687 . - 0 ID=cds-WP_311541298.1;Parent=gene-RM672_RS03590;Dbxref=GenBank:WP_311541298.1;Name=WP_311541298.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483628.1;locus_tag=RM672_RS03590;product=XTP/dITP diphosphatase;protein_id=WP_311541298.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 10691 11500 . - . ID=gene-RM672_RS03595;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=RM672_RS03595;old_locus_tag=RM672_03595 NZ_JAVRJS010000002.1 Protein Homology CDS 10691 11500 . - 0 ID=cds-WP_037571631.1;Parent=gene-RM672_RS03595;Dbxref=GenBank:WP_037571631.1;Name=WP_037571631.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424808.1;locus_tag=RM672_RS03595;product=glutamate racemase;protein_id=WP_037571631.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 11727 12566 . - . ID=gene-RM672_RS03600;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=RM672_RS03600;old_locus_tag=RM672_03600 NZ_JAVRJS010000002.1 Protein Homology CDS 11727 12566 . - 0 ID=cds-WP_037571633.1;Parent=gene-RM672_RS03600;Dbxref=GenBank:WP_037571633.1;Name=WP_037571633.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507957.1;locus_tag=RM672_RS03600;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_037571633.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 12566 14332 . - . ID=gene-RM672_RS03605;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=RM672_RS03605;old_locus_tag=RM672_03605 NZ_JAVRJS010000002.1 Protein Homology CDS 12566 14332 . - 0 ID=cds-WP_037571637.1;Parent=gene-RM672_RS03605;Dbxref=GenBank:WP_037571637.1;Name=WP_037571637.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=RM672_RS03605;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_037571637.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 14451 15062 . - . ID=gene-RM672_RS03610;Name=RM672_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03610;old_locus_tag=RM672_03610 NZ_JAVRJS010000002.1 Protein Homology CDS 14451 15062 . - 0 ID=cds-WP_037571652.1;Parent=gene-RM672_RS03610;Dbxref=GenBank:WP_037571652.1;Name=WP_037571652.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449979.1;locus_tag=RM672_RS03610;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_037571652.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 15221 17011 . - . ID=gene-RM672_RS03615;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=RM672_RS03615;old_locus_tag=RM672_03615 NZ_JAVRJS010000002.1 Protein Homology CDS 15221 17011 . - 0 ID=cds-WP_037571654.1;Parent=gene-RM672_RS03615;Dbxref=GenBank:WP_037571654.1;Name=WP_037571654.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455471.1;locus_tag=RM672_RS03615;product=excinuclease ABC subunit UvrC;protein_id=WP_037571654.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 17137 17451 . - . ID=gene-RM672_RS03620;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=RM672_RS03620;old_locus_tag=RM672_03620 NZ_JAVRJS010000002.1 Protein Homology CDS 17137 17451 . - 0 ID=cds-WP_037571657.1;Parent=gene-RM672_RS03620;Dbxref=GenBank:WP_037571657.1;Name=WP_037571657.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=RM672_RS03620;product=thioredoxin;protein_id=WP_037571657.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 17527 19875 . - . ID=gene-RM672_RS03625;Name=RM672_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03625;old_locus_tag=RM672_03625 NZ_JAVRJS010000002.1 Protein Homology CDS 17527 19875 . - 0 ID=cds-WP_311541299.1;Parent=gene-RM672_RS03625;Dbxref=GenBank:WP_311541299.1;Name=WP_311541299.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=RM672_RS03625;product=endonuclease MutS2;protein_id=WP_311541299.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 20052 21755 . - . ID=gene-RM672_RS03630;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=RM672_RS03630;old_locus_tag=RM672_03630 NZ_JAVRJS010000002.1 Protein Homology CDS 20052 21755 . - 0 ID=cds-WP_107387795.1;Parent=gene-RM672_RS03630;Dbxref=GenBank:WP_107387795.1;Name=WP_107387795.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930709.1;locus_tag=RM672_RS03630;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_107387795.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 21829 22350 . - . ID=gene-RM672_RS03635;Name=RM672_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03635;old_locus_tag=RM672_03635 NZ_JAVRJS010000002.1 Protein Homology CDS 21829 22350 . - 0 ID=cds-WP_037571662.1;Parent=gene-RM672_RS03635;Dbxref=GenBank:WP_037571662.1;Name=WP_037571662.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: protein motif:HMM:NF014704.7;locus_tag=RM672_RS03635;product=CvpA family protein;protein_id=WP_037571662.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 22352 22618 . - . ID=gene-RM672_RS03640;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=RM672_RS03640;old_locus_tag=RM672_03640 NZ_JAVRJS010000002.1 Protein Homology CDS 22352 22618 . - 0 ID=cds-WP_037571667.1;Parent=gene-RM672_RS03640;Dbxref=GenBank:WP_037571667.1;Name=WP_037571667.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830081.1;locus_tag=RM672_RS03640;product=cell division protein ZapA;protein_id=WP_037571667.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 22817 23752 . + . ID=gene-RM672_RS03645;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=RM672_RS03645;old_locus_tag=RM672_03645 NZ_JAVRJS010000002.1 Protein Homology CDS 22817 23752 . + 0 ID=cds-WP_311541300.1;Parent=gene-RM672_RS03645;Dbxref=GenBank:WP_311541300.1;Name=WP_311541300.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303387.1;locus_tag=RM672_RS03645;product=ribonuclease HIII;protein_id=WP_311541300.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 23976 26381 . - . ID=gene-RM672_RS03650;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=RM672_RS03650;old_locus_tag=RM672_03650 NZ_JAVRJS010000002.1 Protein Homology CDS 23976 26381 . - 0 ID=cds-WP_105965225.1;Parent=gene-RM672_RS03650;Dbxref=GenBank:WP_105965225.1;Name=WP_105965225.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=RM672_RS03650;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_105965225.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 26375 27439 . - . ID=gene-RM672_RS03655;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=RM672_RS03655;old_locus_tag=RM672_03655 NZ_JAVRJS010000002.1 Protein Homology CDS 26375 27439 . - 0 ID=cds-WP_311541301.1;Parent=gene-RM672_RS03655;Dbxref=GenBank:WP_311541301.1;Name=WP_311541301.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499637.1;locus_tag=RM672_RS03655;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_311541301.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 27740 28486 . - . ID=gene-RM672_RS03660;Name=RM672_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03660;old_locus_tag=RM672_03660 NZ_JAVRJS010000002.1 Protein Homology CDS 27740 28486 . - 0 ID=cds-WP_103159649.1;Parent=gene-RM672_RS03660;Dbxref=GenBank:WP_103159649.1;Name=WP_103159649.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435366.1;locus_tag=RM672_RS03660;product=TrmH family RNA methyltransferase;protein_id=WP_103159649.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 29182 29355 . - . ID=gene-RM672_RS03665;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=RM672_RS03665;old_locus_tag=RM672_03665 NZ_JAVRJS010000002.1 Protein Homology CDS 29182 29355 . - 0 ID=cds-WP_037571680.1;Parent=gene-RM672_RS03665;Dbxref=GenBank:WP_037571680.1;Name=WP_037571680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=RM672_RS03665;product=50S ribosomal protein L32;protein_id=WP_037571680.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 29398 29940 . - . ID=gene-RM672_RS03670;Name=RM672_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03670;old_locus_tag=RM672_03670 NZ_JAVRJS010000002.1 Protein Homology CDS 29398 29940 . - 0 ID=cds-WP_037571683.1;Parent=gene-RM672_RS03670;Dbxref=GenBank:WP_037571683.1;Name=WP_037571683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=RM672_RS03670;product=YceD family protein;protein_id=WP_037571683.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 30067 31212 . + . ID=gene-RM672_RS03675;Name=RM672_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03675;old_locus_tag=RM672_03675 NZ_JAVRJS010000002.1 Protein Homology CDS 30067 31212 . + 0 ID=cds-WP_105965932.1;Parent=gene-RM672_RS03675;Dbxref=GenBank:WP_105965932.1;Name=WP_105965932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276103.1;locus_tag=RM672_RS03675;product=nucleotidyltransferase;protein_id=WP_105965932.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 31658 32152 . - . ID=gene-RM672_RS03680;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=RM672_RS03680;old_locus_tag=RM672_03680 NZ_JAVRJS010000002.1 Protein Homology CDS 31658 32152 . - 0 ID=cds-WP_311541303.1;Parent=gene-RM672_RS03680;Dbxref=GenBank:WP_311541303.1;Name=WP_311541303.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=RM672_RS03680;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_311541303.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 32145 32696 . - . ID=gene-RM672_RS03685;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=RM672_RS03685;old_locus_tag=RM672_03685 NZ_JAVRJS010000002.1 Protein Homology CDS 32145 32696 . - 0 ID=cds-WP_037571691.1;Parent=gene-RM672_RS03685;Dbxref=GenBank:WP_037571691.1;Name=WP_037571691.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=RM672_RS03685;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_037571691.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 32756 33145 . + . ID=gene-RM672_RS03690;Name=RM672_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03690;old_locus_tag=RM672_03690 NZ_JAVRJS010000002.1 Protein Homology CDS 32756 33145 . + 0 ID=cds-WP_037571694.1;Parent=gene-RM672_RS03690;Dbxref=GenBank:WP_037571694.1;Name=WP_037571694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=RM672_RS03690;product=DUF7147 family protein;protein_id=WP_037571694.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 33146 33394 . - . ID=gene-RM672_RS03695;Name=RM672_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03695;old_locus_tag=RM672_03695 NZ_JAVRJS010000002.1 Protein Homology CDS 33146 33394 . - 0 ID=cds-WP_037571696.1;Parent=gene-RM672_RS03695;Dbxref=GenBank:WP_037571696.1;Name=WP_037571696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469276.1;locus_tag=RM672_RS03695;product=DUF2129 domain-containing protein;protein_id=WP_037571696.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 33483 34391 . + . ID=gene-RM672_RS03700;Name=RM672_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03700;old_locus_tag=RM672_03700 NZ_JAVRJS010000002.1 Protein Homology CDS 33483 34391 . + 0 ID=cds-WP_105963401.1;Parent=gene-RM672_RS03700;Dbxref=GenBank:WP_105963401.1;Name=WP_105963401.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=RM672_RS03700;product=lysophosphatidylglycerol phospholipase D;protein_id=WP_105963401.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 34573 35010 . - . ID=gene-RM672_RS03705;Name=RM672_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03705;old_locus_tag=RM672_03705 NZ_JAVRJS010000002.1 Protein Homology CDS 34573 35010 . - 0 ID=cds-WP_037571699.1;Parent=gene-RM672_RS03705;Dbxref=GenBank:WP_037571699.1;Name=WP_037571699.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462472.1;locus_tag=RM672_RS03705;product=YlbF/YmcA family competence regulator;protein_id=WP_037571699.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 35003 36076 . - . ID=gene-RM672_RS03710;Name=RM672_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03710;old_locus_tag=RM672_03710 NZ_JAVRJS010000002.1 Protein Homology CDS 35003 36076 . - 0 ID=cds-WP_311541304.1;Parent=gene-RM672_RS03710;Dbxref=GenBank:WP_311541304.1;Name=WP_311541304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168162.1;locus_tag=RM672_RS03710;product=CAP-associated domain-containing protein;protein_id=WP_311541304.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 36202 36663 . - . ID=gene-RM672_RS03715;Name=RM672_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03715;old_locus_tag=RM672_03715 NZ_JAVRJS010000002.1 Protein Homology CDS 36202 36663 . - 0 ID=cds-WP_037571713.1;Parent=gene-RM672_RS03715;Dbxref=GenBank:WP_037571713.1;Name=WP_037571713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=RM672_RS03715;product=DUF420 domain-containing protein;protein_id=WP_037571713.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 36688 37599 . - . ID=gene-RM672_RS03720;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=RM672_RS03720;old_locus_tag=RM672_03720 NZ_JAVRJS010000002.1 Protein Homology CDS 36688 37599 . - 0 ID=cds-WP_311541305.1;Parent=gene-RM672_RS03720;Dbxref=GenBank:WP_311541305.1;Name=WP_311541305.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168165.1;locus_tag=RM672_RS03720;product=heme o synthase;protein_id=WP_311541305.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 37813 38721 . + . ID=gene-RM672_RS03725;Name=RM672_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03725;old_locus_tag=RM672_03725 NZ_JAVRJS010000002.1 Protein Homology CDS 37813 38721 . + 0 ID=cds-WP_037571718.1;Parent=gene-RM672_RS03725;Dbxref=GenBank:WP_037571718.1;Name=WP_037571718.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830131.1;locus_tag=RM672_RS03725;product=COX15/CtaA family protein;protein_id=WP_037571718.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 38776 42225 . - . ID=gene-RM672_RS03730;Name=RM672_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03730;old_locus_tag=RM672_03730 NZ_JAVRJS010000002.1 Protein Homology CDS 38776 42225 . - 0 ID=cds-WP_311541306.1;Parent=gene-RM672_RS03730;Dbxref=GenBank:WP_311541306.1;Name=WP_311541306.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470251.1;locus_tag=RM672_RS03730;product=pyruvate carboxylase;protein_id=WP_311541306.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 42490 43710 . - . ID=gene-RM672_RS03735;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=RM672_RS03735;old_locus_tag=RM672_03735 NZ_JAVRJS010000002.1 Protein Homology CDS 42490 43710 . - 0 ID=cds-WP_037571723.1;Parent=gene-RM672_RS03735;Dbxref=GenBank:WP_037571723.1;Name=WP_037571723.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424780.1;locus_tag=RM672_RS03735;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_037571723.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 43787 44062 . - . ID=gene-RM672_RS03740;Name=RM672_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03740;old_locus_tag=RM672_03740 NZ_JAVRJS010000002.1 Protein Homology CDS 43787 44062 . - 0 ID=cds-WP_037571726.1;Parent=gene-RM672_RS03740;Dbxref=GenBank:WP_037571726.1;Name=WP_037571726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830079.1;locus_tag=RM672_RS03740;product=Fpa/YlaN family protein;protein_id=WP_037571726.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 44198 44680 . + . ID=gene-RM672_RS03745;Name=RM672_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03745;old_locus_tag=RM672_03745 NZ_JAVRJS010000002.1 Protein Homology CDS 44198 44680 . + 0 ID=cds-WP_037571730.1;Parent=gene-RM672_RS03745;Dbxref=GenBank:WP_037571730.1;Name=WP_037571730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499607.1;locus_tag=RM672_RS03745;product=hypothetical protein;protein_id=WP_037571730.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 44681 44866 . + . ID=gene-RM672_RS03750;Name=RM672_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03750;old_locus_tag=RM672_03750 NZ_JAVRJS010000002.1 Protein Homology CDS 44681 44866 . + 0 ID=cds-WP_037571734.1;Parent=gene-RM672_RS03750;Dbxref=GenBank:WP_037571734.1;Name=WP_037571734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462703.1;locus_tag=RM672_RS03750;product=DUF2197 domain-containing protein;protein_id=WP_037571734.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 45125 46249 . - . ID=gene-RM672_RS03755;Name=RM672_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03755;old_locus_tag=RM672_03755 NZ_JAVRJS010000002.1 Protein Homology CDS 45125 46249 . - 0 ID=cds-WP_037571737.1;Parent=gene-RM672_RS03755;Dbxref=GenBank:WP_037571737.1;Name=WP_037571737.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439060.1;locus_tag=RM672_RS03755;product=NADH-dependent flavin oxidoreductase;protein_id=WP_037571737.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 46457 48304 . - . ID=gene-RM672_RS03760;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=RM672_RS03760;old_locus_tag=RM672_03760 NZ_JAVRJS010000002.1 Protein Homology CDS 46457 48304 . - 0 ID=cds-WP_037571740.1;Parent=gene-RM672_RS03760;Dbxref=GenBank:WP_037571740.1;Name=WP_037571740.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499605.1;locus_tag=RM672_RS03760;product=translational GTPase TypA;protein_id=WP_037571740.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 48396 48587 . + . ID=gene-RM672_RS03765;Name=RM672_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03765;old_locus_tag=RM672_03765 NZ_JAVRJS010000002.1 Protein Homology CDS 48396 48587 . + 0 ID=cds-WP_229717287.1;Parent=gene-RM672_RS03765;Dbxref=GenBank:WP_229717287.1;Name=WP_229717287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810616.1;locus_tag=RM672_RS03765;product=DUF5325 family protein;protein_id=WP_229717287.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 48779 49591 . - . ID=gene-RM672_RS03770;Name=RM672_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03770;old_locus_tag=RM672_03770 NZ_JAVRJS010000002.1 Protein Homology CDS 48779 49591 . - 0 ID=cds-WP_037571744.1;Parent=gene-RM672_RS03770;Dbxref=GenBank:WP_037571744.1;Name=WP_037571744.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480537.1;locus_tag=RM672_RS03770;product=inositol monophosphatase family protein;protein_id=WP_037571744.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 49707 50318 . + . ID=gene-RM672_RS03775;Name=RM672_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03775;old_locus_tag=RM672_03775 NZ_JAVRJS010000002.1 Protein Homology CDS 49707 50318 . + 0 ID=cds-WP_037571745.1;Parent=gene-RM672_RS03775;Dbxref=GenBank:WP_037571745.1;Name=WP_037571745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=RM672_RS03775;product=YktB family protein;protein_id=WP_037571745.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 50607 51413 . - . ID=gene-RM672_RS03780;Name=RM672_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03780;old_locus_tag=RM672_03780 NZ_JAVRJS010000002.1 Protein Homology CDS 50607 51413 . - 0 ID=cds-WP_037571746.1;Parent=gene-RM672_RS03780;Dbxref=GenBank:WP_037571746.1;Name=WP_037571746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024670.7;locus_tag=RM672_RS03780;product=DUF4064 domain-containing protein;protein_id=WP_037571746.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 51655 52722 . - . ID=gene-RM672_RS03785;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=RM672_RS03785;old_locus_tag=RM672_03785 NZ_JAVRJS010000002.1 Protein Homology CDS 51655 52722 . - 0 ID=cds-WP_037571747.1;Parent=gene-RM672_RS03785;Dbxref=GenBank:WP_037571747.1;Name=WP_037571747.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614239.1;locus_tag=RM672_RS03785;product=lipoteichoic acid stability factor AuxB;protein_id=WP_037571747.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 52787 53857 . - . ID=gene-RM672_RS03790;Name=RM672_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03790;old_locus_tag=RM672_03790 NZ_JAVRJS010000002.1 Protein Homology CDS 52787 53857 . - 0 ID=cds-WP_037571748.1;Parent=gene-RM672_RS03790;Dbxref=GenBank:WP_037571748.1;Name=WP_037571748.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=RM672_RS03790;product=ABC transporter substrate-binding protein;protein_id=WP_037571748.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 53854 54666 . - . ID=gene-RM672_RS03795;Name=RM672_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03795;old_locus_tag=RM672_03795 NZ_JAVRJS010000002.1 Protein Homology CDS 53854 54666 . - 0 ID=cds-WP_037571750.1;Parent=gene-RM672_RS03795;Dbxref=GenBank:WP_037571750.1;Name=WP_037571750.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=RM672_RS03795;product=ABC transporter permease;protein_id=WP_037571750.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 54663 55469 . - . ID=gene-RM672_RS03800;Name=RM672_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03800;old_locus_tag=RM672_03800 NZ_JAVRJS010000002.1 Protein Homology CDS 54663 55469 . - 0 ID=cds-WP_311541307.1;Parent=gene-RM672_RS03800;Dbxref=GenBank:WP_311541307.1;Name=WP_311541307.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=RM672_RS03800;product=ABC transporter permease;protein_id=WP_311541307.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 55456 56556 . - . ID=gene-RM672_RS03805;Name=RM672_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03805;old_locus_tag=RM672_03805 NZ_JAVRJS010000002.1 Protein Homology CDS 55456 56556 . - 0 ID=cds-WP_037571755.1;Parent=gene-RM672_RS03805;Dbxref=GenBank:WP_037571755.1;Name=WP_037571755.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=RM672_RS03805;product=ABC transporter ATP-binding protein;protein_id=WP_037571755.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 56568 57107 . - . ID=gene-RM672_RS03810;Name=RM672_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03810;old_locus_tag=RM672_03810 NZ_JAVRJS010000002.1 Protein Homology CDS 56568 57107 . - 0 ID=cds-WP_037571758.1;Parent=gene-RM672_RS03810;Dbxref=GenBank:WP_037571758.1;Name=WP_037571758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=RM672_RS03810;product=helix-turn-helix domain-containing protein;protein_id=WP_037571758.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 57211 57483 . - . ID=gene-RM672_RS03815;Name=RM672_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03815;old_locus_tag=RM672_03815 NZ_JAVRJS010000002.1 Protein Homology CDS 57211 57483 . - 0 ID=cds-WP_037571766.1;Parent=gene-RM672_RS03815;Dbxref=GenBank:WP_037571766.1;Name=WP_037571766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=RM672_RS03815;product=UPF0223 family protein;protein_id=WP_037571766.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 57577 58983 . - . ID=gene-RM672_RS03820;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM672_RS03820;old_locus_tag=RM672_03820 NZ_JAVRJS010000002.1 Protein Homology CDS 57577 58983 . - 0 ID=cds-WP_105965929.1;Parent=gene-RM672_RS03820;Dbxref=GenBank:WP_105965929.1;Name=WP_105965929.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=RM672_RS03820;product=dihydrolipoyl dehydrogenase;protein_id=WP_105965929.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 58987 60276 . - . ID=gene-RM672_RS03825;Name=RM672_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03825;old_locus_tag=RM672_03825 NZ_JAVRJS010000002.1 Protein Homology CDS 58987 60276 . - 0 ID=cds-WP_037571772.1;Parent=gene-RM672_RS03825;Dbxref=GenBank:WP_037571772.1;Name=WP_037571772.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=RM672_RS03825;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_037571772.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 60459 61436 . - . ID=gene-RM672_RS03830;Name=RM672_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03830;old_locus_tag=RM672_03830 NZ_JAVRJS010000002.1 Protein Homology CDS 60459 61436 . - 0 ID=cds-WP_037571775.1;Parent=gene-RM672_RS03830;Dbxref=GenBank:WP_037571775.1;Name=WP_037571775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=RM672_RS03830;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_037571775.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 61440 62552 . - . ID=gene-RM672_RS03835;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=RM672_RS03835;old_locus_tag=RM672_03835 NZ_JAVRJS010000002.1 Protein Homology CDS 61440 62552 . - 0 ID=cds-WP_037571778.1;Parent=gene-RM672_RS03835;Dbxref=GenBank:WP_037571778.1;Name=WP_037571778.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=RM672_RS03835;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_037571778.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 62713 63342 . - . ID=gene-RM672_RS03840;Name=RM672_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03840;old_locus_tag=RM672_03840 NZ_JAVRJS010000002.1 Protein Homology CDS 62713 63342 . - 0 ID=cds-WP_037571785.1;Parent=gene-RM672_RS03840;Dbxref=GenBank:WP_037571785.1;Name=WP_037571785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=RM672_RS03840;product=YkyA family protein;protein_id=WP_037571785.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 63467 64018 . + . ID=gene-RM672_RS03845;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM672_RS03845;old_locus_tag=RM672_03845 NZ_JAVRJS010000002.1 Protein Homology CDS 63467 64018 . + 0 ID=cds-WP_037571788.1;Parent=gene-RM672_RS03845;Dbxref=GenBank:WP_037571788.1;Name=WP_037571788.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=RM672_RS03845;product=peptide deformylase;protein_id=WP_037571788.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 64080 64349 . - . ID=gene-RM672_RS03850;Name=RM672_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03850;old_locus_tag=RM672_03850 NZ_JAVRJS010000002.1 Protein Homology CDS 64080 64349 . - 0 ID=cds-WP_037571790.1;Parent=gene-RM672_RS03850;Dbxref=GenBank:WP_037571790.1;Name=WP_037571790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=RM672_RS03850;product=hypothetical protein;protein_id=WP_037571790.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 64669 64884 . + . ID=gene-RM672_RS03855;Name=RM672_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03855;old_locus_tag=RM672_03855 NZ_JAVRJS010000002.1 Protein Homology CDS 64669 64884 . + 0 ID=cds-WP_037571792.1;Parent=gene-RM672_RS03855;Dbxref=GenBank:WP_037571792.1;Name=WP_037571792.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=RM672_RS03855;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_037571792.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 64884 66566 . + . ID=gene-RM672_RS03860;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=RM672_RS03860;old_locus_tag=RM672_03860 NZ_JAVRJS010000002.1 Protein Homology CDS 64884 66566 . + 0 ID=cds-WP_103159440.1;Parent=gene-RM672_RS03860;Dbxref=GenBank:WP_103159440.1;Name=WP_103159440.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614255.1;locus_tag=RM672_RS03860;product=ribonuclease J1;protein_id=WP_103159440.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 66664 67323 . - . ID=gene-RM672_RS03865;Name=RM672_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03865;old_locus_tag=RM672_03865 NZ_JAVRJS010000002.1 Protein Homology CDS 66664 67323 . - 0 ID=cds-WP_037571801.1;Parent=gene-RM672_RS03865;Dbxref=GenBank:WP_037571801.1;Name=WP_037571801.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=RM672_RS03865;product=potassium channel family protein;protein_id=WP_037571801.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 67496 68515 . - . ID=gene-RM672_RS03870;Name=RM672_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03870;old_locus_tag=RM672_03870 NZ_JAVRJS010000002.1 Protein Homology CDS 67496 68515 . - 0 ID=cds-WP_119505212.1;Parent=gene-RM672_RS03870;Dbxref=GenBank:WP_119505212.1;Name=WP_119505212.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=RM672_RS03870;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_119505212.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 68512 69864 . - . ID=gene-RM672_RS03875;Name=RM672_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03875;old_locus_tag=RM672_03875 NZ_JAVRJS010000002.1 Protein Homology CDS 68512 69864 . - 0 ID=cds-WP_103159442.1;Parent=gene-RM672_RS03875;Dbxref=GenBank:WP_103159442.1;Name=WP_103159442.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424752.1;locus_tag=RM672_RS03875;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_103159442.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 70087 70314 . + . ID=gene-RM672_RS03880;Name=RM672_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03880;old_locus_tag=RM672_03880 NZ_JAVRJS010000002.1 Protein Homology CDS 70087 70314 . + 0 ID=cds-WP_037571811.1;Parent=gene-RM672_RS03880;Dbxref=GenBank:WP_037571811.1;Name=WP_037571811.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289617.1;locus_tag=RM672_RS03880;product=glutaredoxin family protein;protein_id=WP_037571811.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 70438 72159 . - . ID=gene-RM672_RS03885;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=RM672_RS03885;old_locus_tag=RM672_03885 NZ_JAVRJS010000002.1 Protein Homology CDS 70438 72159 . - 0 ID=cds-WP_037571813.1;Parent=gene-RM672_RS03885;Dbxref=GenBank:WP_037571813.1;Name=WP_037571813.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=RM672_RS03885;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_037571813.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 72159 72425 . - . ID=gene-RM672_RS03890;Name=RM672_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03890;old_locus_tag=RM672_03890 NZ_JAVRJS010000002.1 Protein Homology CDS 72159 72425 . - 0 ID=cds-WP_037566021.1;Parent=gene-RM672_RS03890;Dbxref=GenBank:WP_037566021.1;Name=WP_037566021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=RM672_RS03890;product=phosphocarrier protein HPr;protein_id=WP_037566021.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 72583 73113 . - . ID=gene-RM672_RS03895;Name=RM672_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03895;old_locus_tag=RM672_03895 NZ_JAVRJS010000002.1 Protein Homology CDS 72583 73113 . - 0 ID=cds-WP_037571815.1;Parent=gene-RM672_RS03895;Dbxref=GenBank:WP_037571815.1;Name=WP_037571815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=RM672_RS03895;product=hypothetical protein;protein_id=WP_037571815.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 73157 74341 . - . ID=gene-RM672_RS03900;Name=RM672_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03900;old_locus_tag=RM672_03900 NZ_JAVRJS010000002.1 Protein Homology CDS 73157 74341 . - 0 ID=cds-WP_037571818.1;Parent=gene-RM672_RS03900;Dbxref=GenBank:WP_037571818.1;Name=WP_037571818.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899956.1;locus_tag=RM672_RS03900;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_037571818.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 74467 75810 . - . ID=gene-RM672_RS03905;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=RM672_RS03905;old_locus_tag=RM672_03905 NZ_JAVRJS010000002.1 Protein Homology CDS 74467 75810 . - 0 ID=cds-WP_037571820.1;Parent=gene-RM672_RS03905;Dbxref=GenBank:WP_037571820.1;Name=WP_037571820.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424746.1;locus_tag=RM672_RS03905;product=lipoteichoic acid stability factor AuxA;protein_id=WP_037571820.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 76136 76267 . + . ID=gene-RM672_RS03910;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=RM672_RS03910;old_locus_tag=RM672_03910 NZ_JAVRJS010000002.1 Protein Homology CDS 76136 76267 . + 0 ID=cds-WP_194434871.1;Parent=gene-RM672_RS03910;Dbxref=GenBank:WP_194434871.1;Name=WP_194434871.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=RM672_RS03910;product=glycopeptide resistance-associated protein GraF;protein_id=WP_194434871.1;transl_table=11 NZ_JAVRJS010000002.1 cmsearch riboswitch 76461 76561 . + . ID=id-NZ_JAVRJS010000002.1:76461..76561;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000002.1 RefSeq gene 76676 77257 . + . ID=gene-RM672_RS03915;Name=RM672_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03915;old_locus_tag=RM672_03915 NZ_JAVRJS010000002.1 Protein Homology CDS 76676 77257 . + 0 ID=cds-WP_037571822.1;Parent=gene-RM672_RS03915;Dbxref=GenBank:WP_037571822.1;Name=WP_037571822.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168261.1;locus_tag=RM672_RS03915;product=ECF transporter S component;protein_id=WP_037571822.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 77270 78667 . + . ID=gene-RM672_RS03920;Name=RM672_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03920;old_locus_tag=RM672_03920 NZ_JAVRJS010000002.1 Protein Homology CDS 77270 78667 . + 0 ID=cds-WP_103159444.1;Parent=gene-RM672_RS03920;Dbxref=GenBank:WP_103159444.1;Name=WP_103159444.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=RM672_RS03920;product=ABC transporter ATP-binding protein;protein_id=WP_103159444.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 78664 79455 . + . ID=gene-RM672_RS03925;Name=RM672_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03925;old_locus_tag=RM672_03925 NZ_JAVRJS010000002.1 Protein Homology CDS 78664 79455 . + 0 ID=cds-WP_037571827.1;Parent=gene-RM672_RS03925;Dbxref=GenBank:WP_037571827.1;Name=WP_037571827.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=RM672_RS03925;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_037571827.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 80275 81516 . - . ID=gene-RM672_RS03930;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=RM672_RS03930;old_locus_tag=RM672_03930 NZ_JAVRJS010000002.1 Protein Homology CDS 80275 81516 . - 0 ID=cds-WP_037571830.1;Parent=gene-RM672_RS03930;Dbxref=GenBank:WP_037571830.1;Name=WP_037571830.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448142.1;locus_tag=RM672_RS03930;product=phosphoribosylamine--glycine ligase;protein_id=WP_037571830.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 81531 83009 . - . ID=gene-RM672_RS03935;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=RM672_RS03935;old_locus_tag=RM672_03935 NZ_JAVRJS010000002.1 Protein Homology CDS 81531 83009 . - 0 ID=cds-WP_037571833.1;Parent=gene-RM672_RS03935;Dbxref=GenBank:WP_037571833.1;Name=WP_037571833.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462693.1;locus_tag=RM672_RS03935;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_037571833.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 83022 83588 . - . ID=gene-RM672_RS03940;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=RM672_RS03940;old_locus_tag=RM672_03940 NZ_JAVRJS010000002.1 Protein Homology CDS 83022 83588 . - 0 ID=cds-WP_037571836.1;Parent=gene-RM672_RS03940;Dbxref=GenBank:WP_037571836.1;Name=WP_037571836.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=RM672_RS03940;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_037571836.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 83591 84619 . - . ID=gene-RM672_RS03945;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=RM672_RS03945;old_locus_tag=RM672_03945 NZ_JAVRJS010000002.1 Protein Homology CDS 83591 84619 . - 0 ID=cds-WP_037571839.1;Parent=gene-RM672_RS03945;Dbxref=GenBank:WP_037571839.1;Name=WP_037571839.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175767.1;locus_tag=RM672_RS03945;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_037571839.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 84624 86045 . - . ID=gene-RM672_RS03950;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=RM672_RS03950;old_locus_tag=RM672_03950 NZ_JAVRJS010000002.1 Protein Homology CDS 84624 86045 . - 0 ID=cds-WP_037571849.1;Parent=gene-RM672_RS03950;Dbxref=GenBank:WP_037571849.1;Name=WP_037571849.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=RM672_RS03950;product=amidophosphoribosyltransferase;protein_id=WP_037571849.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 86024 88213 . - . ID=gene-RM672_RS03955;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=RM672_RS03955;old_locus_tag=RM672_03955 NZ_JAVRJS010000002.1 Protein Homology CDS 86024 88213 . - 0 ID=cds-WP_311542461.1;Parent=gene-RM672_RS03955;Dbxref=GenBank:WP_311542461.1;Name=WP_311542461.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=RM672_RS03955;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_311542461.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 88206 88877 . - . ID=gene-RM672_RS03960;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=RM672_RS03960;old_locus_tag=RM672_03960 NZ_JAVRJS010000002.1 Protein Homology CDS 88206 88877 . - 0 ID=cds-WP_037571853.1;Parent=gene-RM672_RS03960;Dbxref=GenBank:WP_037571853.1;Name=WP_037571853.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=RM672_RS03960;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_037571853.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 88877 89146 . - . ID=gene-RM672_RS03965;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=RM672_RS03965;old_locus_tag=RM672_03965 NZ_JAVRJS010000002.1 Protein Homology CDS 88877 89146 . - 0 ID=cds-WP_037571855.1;Parent=gene-RM672_RS03965;Dbxref=GenBank:WP_037571855.1;Name=WP_037571855.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=RM672_RS03965;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_037571855.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 89148 89855 . - . ID=gene-RM672_RS03970;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=RM672_RS03970;old_locus_tag=RM672_03970 NZ_JAVRJS010000002.1 Protein Homology CDS 89148 89855 . - 0 ID=cds-WP_037571857.1;Parent=gene-RM672_RS03970;Dbxref=GenBank:WP_037571857.1;Name=WP_037571857.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167838.1;locus_tag=RM672_RS03970;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_037571857.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 89852 90979 . - . ID=gene-RM672_RS03975;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=RM672_RS03975;old_locus_tag=RM672_03975 NZ_JAVRJS010000002.1 Protein Homology CDS 89852 90979 . - 0 ID=cds-WP_037571859.1;Parent=gene-RM672_RS03975;Dbxref=GenBank:WP_037571859.1;Name=WP_037571859.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637035.1;locus_tag=RM672_RS03975;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_037571859.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 90966 91448 . - . ID=gene-RM672_RS03980;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=RM672_RS03980;old_locus_tag=RM672_03980 NZ_JAVRJS010000002.1 Protein Homology CDS 90966 91448 . - 0 ID=cds-WP_037573011.1;Parent=gene-RM672_RS03980;Dbxref=GenBank:WP_037573011.1;Name=WP_037573011.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=RM672_RS03980;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_037573011.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 91660 92517 . + . ID=gene-RM672_RS03985;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=RM672_RS03985;old_locus_tag=RM672_03985 NZ_JAVRJS010000002.1 Protein Homology CDS 91660 92517 . + 0 ID=cds-WP_037571861.1;Parent=gene-RM672_RS03985;Dbxref=GenBank:WP_037571861.1;Name=WP_037571861.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=RM672_RS03985;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_037571861.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 92674 93819 . - . ID=gene-RM672_RS03990;Name=RM672_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03990;old_locus_tag=RM672_03990 NZ_JAVRJS010000002.1 Protein Homology CDS 92674 93819 . - 0 ID=cds-WP_037571864.1;Parent=gene-RM672_RS03990;Dbxref=GenBank:WP_037571864.1;Name=WP_037571864.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=RM672_RS03990;product=globin domain-containing protein;protein_id=WP_037571864.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 94026 94364 . + . ID=gene-RM672_RS03995;Name=RM672_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS03995;old_locus_tag=RM672_03995 NZ_JAVRJS010000002.1 Protein Homology CDS 94026 94364 . + 0 ID=cds-WP_037571867.1;Parent=gene-RM672_RS03995;Dbxref=GenBank:WP_037571867.1;Name=WP_037571867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=RM672_RS03995;product=immunoglobulin-like domain-containing protein;protein_id=WP_037571867.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 94836 95927 . + . ID=gene-RM672_RS04000;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=RM672_RS04000;old_locus_tag=RM672_04000 NZ_JAVRJS010000002.1 Protein Homology CDS 94836 95927 . + 0 ID=cds-WP_037571870.1;Parent=gene-RM672_RS04000;Dbxref=GenBank:WP_037571870.1;Name=WP_037571870.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467596.1;locus_tag=RM672_RS04000;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_037571870.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 95930 97918 . + . ID=gene-RM672_RS04005;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=RM672_RS04005;old_locus_tag=RM672_04005 NZ_JAVRJS010000002.1 Protein Homology CDS 95930 97918 . + 0 ID=cds-WP_037573014.1;Parent=gene-RM672_RS04005;Dbxref=GenBank:WP_037573014.1;Name=WP_037573014.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=RM672_RS04005;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_037573014.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 97908 98513 . + . ID=gene-RM672_RS04010;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=RM672_RS04010;old_locus_tag=RM672_04010 NZ_JAVRJS010000002.1 Protein Homology CDS 97908 98513 . + 0 ID=cds-WP_037571873.1;Parent=gene-RM672_RS04010;Dbxref=GenBank:WP_037571873.1;Name=WP_037571873.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=RM672_RS04010;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_037571873.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 98510 98800 . + . ID=gene-RM672_RS04015;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=RM672_RS04015;old_locus_tag=RM672_04015 NZ_JAVRJS010000002.1 Protein Homology CDS 98510 98800 . + 0 ID=cds-WP_037571876.1;Parent=gene-RM672_RS04015;Dbxref=GenBank:WP_037571876.1;Name=WP_037571876.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=RM672_RS04015;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_037571876.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 99115 100458 . - . ID=gene-RM672_RS04020;Name=RM672_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04020;old_locus_tag=RM672_04020 NZ_JAVRJS010000002.1 Protein Homology CDS 99115 100458 . - 0 ID=cds-WP_037571879.1;Parent=gene-RM672_RS04020;Dbxref=GenBank:WP_037571879.1;Name=WP_037571879.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=RM672_RS04020;product=glycosyltransferase;protein_id=WP_037571879.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 100476 101294 . - . ID=gene-RM672_RS04025;Name=RM672_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04025;old_locus_tag=RM672_04025 NZ_JAVRJS010000002.1 Protein Homology CDS 100476 101294 . - 0 ID=cds-WP_037571882.1;Parent=gene-RM672_RS04025;Dbxref=GenBank:WP_037571882.1;Name=WP_037571882.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=RM672_RS04025;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_037571882.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 101314 102231 . - . ID=gene-RM672_RS04030;Name=RM672_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04030;old_locus_tag=RM672_04030 NZ_JAVRJS010000002.1 Protein Homology CDS 101314 102231 . - 0 ID=cds-WP_037571885.1;Parent=gene-RM672_RS04030;Dbxref=GenBank:WP_037571885.1;Name=WP_037571885.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167467.1;locus_tag=RM672_RS04030;product=ABC transporter ATP-binding protein;protein_id=WP_037571885.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 102237 103427 . - . ID=gene-RM672_RS04035;Name=RM672_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04035;old_locus_tag=RM672_04035 NZ_JAVRJS010000002.1 Protein Homology CDS 102237 103427 . - 0 ID=cds-WP_037571888.1;Parent=gene-RM672_RS04035;Dbxref=GenBank:WP_037571888.1;Name=WP_037571888.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=RM672_RS04035;product=glycosyltransferase family 4 protein;protein_id=WP_037571888.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 103449 104258 . - . ID=gene-RM672_RS04040;Name=RM672_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04040;old_locus_tag=RM672_04040 NZ_JAVRJS010000002.1 Protein Homology CDS 103449 104258 . - 0 ID=cds-WP_037571891.1;Parent=gene-RM672_RS04040;Dbxref=GenBank:WP_037571891.1;Name=WP_037571891.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=RM672_RS04040;product=ABC transporter permease;protein_id=WP_037571891.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 104255 106120 . - . ID=gene-RM672_RS04045;Name=RM672_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04045;old_locus_tag=RM672_04045 NZ_JAVRJS010000002.1 Protein Homology CDS 104255 106120 . - 0 ID=cds-WP_037571893.1;Parent=gene-RM672_RS04045;Dbxref=GenBank:WP_037571893.1;Name=WP_037571893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=RM672_RS04045;product=hypothetical protein;protein_id=WP_037571893.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 106135 108696 . - . ID=gene-RM672_RS04050;Name=RM672_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04050;old_locus_tag=RM672_04050 NZ_JAVRJS010000002.1 Protein Homology CDS 106135 108696 . - 0 ID=cds-WP_311541308.1;Parent=gene-RM672_RS04050;Dbxref=GenBank:WP_311541308.1;Name=WP_311541308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=RM672_RS04050;product=glycosyltransferase;protein_id=WP_311541308.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 108698 109624 . - . ID=gene-RM672_RS04055;Name=RM672_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04055;old_locus_tag=RM672_04055 NZ_JAVRJS010000002.1 Protein Homology CDS 108698 109624 . - 0 ID=cds-WP_037571900.1;Parent=gene-RM672_RS04055;Dbxref=GenBank:WP_037571900.1;Name=WP_037571900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728937.1;locus_tag=RM672_RS04055;product=hypothetical protein;protein_id=WP_037571900.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 109745 111007 . - . ID=gene-RM672_RS04060;Name=RM672_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04060;old_locus_tag=RM672_04060 NZ_JAVRJS010000002.1 Protein Homology CDS 109745 111007 . - 0 ID=cds-WP_103159134.1;Parent=gene-RM672_RS04060;Dbxref=GenBank:WP_103159134.1;Name=WP_103159134.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498728.1;locus_tag=RM672_RS04060;product=nucleotide sugar dehydrogenase;protein_id=WP_103159134.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 111349 112962 . - . ID=gene-RM672_RS04065;Name=RM672_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04065;old_locus_tag=RM672_04065 NZ_JAVRJS010000002.1 Protein Homology CDS 111349 112962 . - 0 ID=cds-WP_311542462.1;Parent=gene-RM672_RS04065;Dbxref=GenBank:WP_311542462.1;Name=WP_311542462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=RM672_RS04065;product=SH3 domain-containing protein;protein_id=WP_311542462.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 113339 114487 . + . ID=gene-RM672_RS04070;Name=RM672_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04070;old_locus_tag=RM672_04070 NZ_JAVRJS010000002.1 Protein Homology CDS 113339 114487 . + 0 ID=cds-WP_311541310.1;Parent=gene-RM672_RS04070;Dbxref=GenBank:WP_311541310.1;Name=WP_311541310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167474.1;locus_tag=RM672_RS04070;product=SH3 domain-containing protein;protein_id=WP_311541310.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 114565 116217 . - . ID=gene-RM672_RS04075;Name=RM672_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04075;old_locus_tag=RM672_04075 NZ_JAVRJS010000002.1 Protein Homology CDS 114565 116217 . - 0 ID=cds-WP_311541311.1;Parent=gene-RM672_RS04075;Dbxref=GenBank:WP_311541311.1;Name=WP_311541311.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728935.1;locus_tag=RM672_RS04075;product=phospho-sugar mutase;protein_id=WP_311541311.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 116569 117816 . + . ID=gene-RM672_RS04080;Name=RM672_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04080;old_locus_tag=RM672_04080 NZ_JAVRJS010000002.1 Protein Homology CDS 116569 117816 . + 0 ID=cds-WP_037571906.1;Parent=gene-RM672_RS04080;Dbxref=GenBank:WP_037571906.1;Name=WP_037571906.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478388.1;locus_tag=RM672_RS04080;product=LCP family protein;protein_id=WP_037571906.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 117833 118303 . + . ID=gene-RM672_RS04085;Name=RM672_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04085;old_locus_tag=RM672_04085 NZ_JAVRJS010000002.1 Protein Homology CDS 117833 118303 . + 0 ID=cds-WP_037571909.1;Parent=gene-RM672_RS04085;Dbxref=GenBank:WP_037571909.1;Name=WP_037571909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471869.1;locus_tag=RM672_RS04085;product=DUF2538 family protein;protein_id=WP_037571909.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 118436 118858 . + . ID=gene-RM672_RS04090;Name=RM672_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04090;old_locus_tag=RM672_04090 NZ_JAVRJS010000002.1 Protein Homology CDS 118436 118858 . + 0 ID=cds-WP_037571912.1;Parent=gene-RM672_RS04090;Dbxref=GenBank:WP_037571912.1;Name=WP_037571912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018673135.1;locus_tag=RM672_RS04090;product=GNAT family N-acetyltransferase;protein_id=WP_037571912.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 119061 123155 . + . ID=gene-RM672_RS04095;Name=RM672_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04095;old_locus_tag=RM672_04095 NZ_JAVRJS010000002.1 Protein Homology CDS 119061 123155 . + 0 ID=cds-WP_311542463.1;Parent=gene-RM672_RS04095;Dbxref=GenBank:WP_311542463.1;Name=WP_311542463.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167711.1;locus_tag=RM672_RS04095;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_311542463.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 123568 124575 . + . ID=gene-RM672_RS04100;Name=RM672_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04100;old_locus_tag=RM672_04100 NZ_JAVRJS010000002.1 Protein Homology CDS 123568 124575 . + 0 ID=cds-WP_037571918.1;Parent=gene-RM672_RS04100;Dbxref=GenBank:WP_037571918.1;Name=WP_037571918.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=RM672_RS04100;product=acyltransferase family protein;protein_id=WP_037571918.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 124647 125813 . + . ID=gene-RM672_RS04105;Name=RM672_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04105;old_locus_tag=RM672_04105 NZ_JAVRJS010000002.1 Protein Homology CDS 124647 125813 . + 0 ID=cds-WP_037571921.1;Parent=gene-RM672_RS04105;Dbxref=GenBank:WP_037571921.1;Name=WP_037571921.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508052.1;locus_tag=RM672_RS04105;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_037571921.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 125906 126724 . - . ID=gene-RM672_RS04110;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=RM672_RS04110;old_locus_tag=RM672_04110 NZ_JAVRJS010000002.1 Protein Homology CDS 125906 126724 . - 0 ID=cds-WP_037571924.1;Parent=gene-RM672_RS04110;Dbxref=GenBank:WP_037571924.1;Name=WP_037571924.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=RM672_RS04110;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_037571924.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 126717 127532 . - . ID=gene-RM672_RS04115;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=RM672_RS04115;old_locus_tag=RM672_04115 NZ_JAVRJS010000002.1 Protein Homology CDS 126717 127532 . - 0 ID=cds-WP_037571929.1;Parent=gene-RM672_RS04115;Dbxref=GenBank:WP_037571929.1;Name=WP_037571929.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471899.1;locus_tag=RM672_RS04115;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_037571929.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 127519 129192 . - . ID=gene-RM672_RS04120;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=RM672_RS04120;old_locus_tag=RM672_04120 NZ_JAVRJS010000002.1 Protein Homology CDS 127519 129192 . - 0 ID=cds-WP_311541313.1;Parent=gene-RM672_RS04120;Dbxref=GenBank:WP_311541313.1;Name=WP_311541313.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833068.1;locus_tag=RM672_RS04120;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_311541313.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 129194 130546 . - . ID=gene-RM672_RS04125;Name=RM672_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04125;old_locus_tag=RM672_04125 NZ_JAVRJS010000002.1 Protein Homology CDS 129194 130546 . - 0 ID=cds-WP_311541314.1;Parent=gene-RM672_RS04125;Dbxref=GenBank:WP_311541314.1;Name=WP_311541314.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=RM672_RS04125;product=isochorismate synthase;protein_id=WP_311541314.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 130721 131659 . + . ID=gene-RM672_RS04130;Name=RM672_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04130;old_locus_tag=RM672_04130 NZ_JAVRJS010000002.1 Protein Homology CDS 130721 131659 . + 0 ID=cds-WP_037571937.1;Parent=gene-RM672_RS04130;Dbxref=GenBank:WP_037571937.1;Name=WP_037571937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=RM672_RS04130;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_037571937.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 131682 132458 . - . ID=gene-RM672_RS04135;Name=RM672_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04135;old_locus_tag=RM672_04135 NZ_JAVRJS010000002.1 Protein Homology CDS 131682 132458 . - 0 ID=cds-WP_103159402.1;Parent=gene-RM672_RS04135;Dbxref=GenBank:WP_103159402.1;Name=WP_103159402.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167985.1;locus_tag=RM672_RS04135;product=ABC transporter permease;protein_id=WP_103159402.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 132455 133102 . - . ID=gene-RM672_RS04140;Name=RM672_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04140;old_locus_tag=RM672_04140 NZ_JAVRJS010000002.1 Protein Homology CDS 132455 133102 . - 0 ID=cds-WP_103159401.1;Parent=gene-RM672_RS04140;Dbxref=GenBank:WP_103159401.1;Name=WP_103159401.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=RM672_RS04140;product=ABC transporter ATP-binding protein;protein_id=WP_103159401.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 133114 133671 . - . ID=gene-RM672_RS04145;Name=RM672_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04145;old_locus_tag=RM672_04145 NZ_JAVRJS010000002.1 Protein Homology CDS 133114 133671 . - 0 ID=cds-WP_037571946.1;Parent=gene-RM672_RS04145;Dbxref=GenBank:WP_037571946.1;Name=WP_037571946.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=RM672_RS04145;product=GNAT family N-acetyltransferase;protein_id=WP_037571946.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 134112 134200 . - . ID=gene-RM672_RS04150;Name=RM672_RS04150;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS04150;old_locus_tag=RM672_04150 NZ_JAVRJS010000002.1 tRNAscan-SE tRNA 134112 134200 . - . ID=rna-RM672_RS04150;Parent=gene-RM672_RS04150;anticodon=(pos:complement(134163..134165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS04150;product=tRNA-Ser NZ_JAVRJS010000002.1 tRNAscan-SE exon 134112 134200 . - . ID=exon-RM672_RS04150-1;Parent=rna-RM672_RS04150;anticodon=(pos:complement(134163..134165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS04150;product=tRNA-Ser NZ_JAVRJS010000002.1 RefSeq gene 134204 134278 . - . ID=gene-RM672_RS04155;Name=RM672_RS04155;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS04155;old_locus_tag=RM672_04155 NZ_JAVRJS010000002.1 tRNAscan-SE tRNA 134204 134278 . - . ID=rna-RM672_RS04155;Parent=gene-RM672_RS04155;anticodon=(pos:complement(134244..134246));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS04155;product=tRNA-Asn NZ_JAVRJS010000002.1 tRNAscan-SE exon 134204 134278 . - . ID=exon-RM672_RS04155-1;Parent=rna-RM672_RS04155;anticodon=(pos:complement(134244..134246));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS04155;product=tRNA-Asn NZ_JAVRJS010000002.1 RefSeq pseudogene 134431 134706 . - . ID=gene-RM672_RS04160;Name=RM672_RS04160;end_range=134706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS04160;old_locus_tag=RM672_04160;partial=true;pseudo=true NZ_JAVRJS010000002.1 Protein Homology CDS 134431 134706 . - 0 ID=cds-RM672_RS04160;Parent=gene-RM672_RS04160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=134706,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020438.7;locus_tag=RM672_RS04160;partial=true;product=YolD-like family protein;pseudo=true;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 134911 136023 . + . ID=gene-RM672_RS04165;Name=RM672_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04165;old_locus_tag=RM672_04165 NZ_JAVRJS010000002.1 Protein Homology CDS 134911 136023 . + 0 ID=cds-WP_000706213.1;Parent=gene-RM672_RS04165;Dbxref=GenBank:WP_000706213.1;Name=WP_000706213.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=RM672_RS04165;product=tyrosine-type recombinase/integrase;protein_id=WP_000706213.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 136026 138089 . + . ID=gene-RM672_RS04170;Name=RM672_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04170;old_locus_tag=RM672_04170 NZ_JAVRJS010000002.1 Protein Homology CDS 136026 138089 . + 0 ID=cds-WP_000026850.1;Parent=gene-RM672_RS04170;Dbxref=GenBank:WP_000026850.1;Name=WP_000026850.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=RM672_RS04170;product=site-specific integrase;protein_id=WP_000026850.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 138098 138463 . + . ID=gene-RM672_RS04175;Name=RM672_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04175;old_locus_tag=RM672_04175 NZ_JAVRJS010000002.1 Protein Homology CDS 138098 138463 . + 0 ID=cds-WP_000410574.1;Parent=gene-RM672_RS04175;Dbxref=GenBank:WP_000410574.1;Name=WP_000410574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410574.1;locus_tag=RM672_RS04175;product=DUF6262 family protein;protein_id=WP_000410574.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 138468 139838 . + . ID=gene-RM672_RS04180;Name=RM672_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04180;old_locus_tag=RM672_04180 NZ_JAVRJS010000002.1 Protein Homology CDS 138468 139838 . + 0 ID=cds-WP_000368919.1;Parent=gene-RM672_RS04180;Dbxref=GenBank:WP_000368919.1;Name=WP_000368919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=RM672_RS04180;product=hypothetical protein;protein_id=WP_000368919.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 139881 140291 . - . ID=gene-RM672_RS04185;Name=RM672_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04185;old_locus_tag=RM672_04185 NZ_JAVRJS010000002.1 Protein Homology CDS 139881 140291 . - 0 ID=cds-WP_000612779.1;Parent=gene-RM672_RS04185;Dbxref=GenBank:WP_000612779.1;Name=WP_000612779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612779.1;locus_tag=RM672_RS04185;product=YolD-like family protein;protein_id=WP_000612779.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 140605 141450 . - . ID=gene-RM672_RS04190;Name=blaZ;gbkey=Gene;gene=blaZ;gene_biotype=protein_coding;locus_tag=RM672_RS04190;old_locus_tag=RM672_04190 NZ_JAVRJS010000002.1 Protein Homology CDS 140605 141450 . - 0 ID=cds-WP_000733622.1;Parent=gene-RM672_RS04190;Dbxref=GenBank:WP_000733622.1;Name=WP_000733622.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaZ;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=RM672_RS04190;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;protein_id=WP_000733622.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 141557 143314 . + . ID=gene-RM672_RS04195;Name=blaR1;gbkey=Gene;gene=blaR1;gene_biotype=protein_coding;locus_tag=RM672_RS04195;old_locus_tag=RM672_04195 NZ_JAVRJS010000002.1 Protein Homology CDS 141557 143314 . + 0 ID=cds-WP_001096367.1;Parent=gene-RM672_RS04195;Dbxref=GenBank:WP_001096367.1;Name=WP_001096367.1;gbkey=CDS;gene=blaR1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=RM672_RS04195;product=beta-lactam sensor/signal transducer BlaR1;protein_id=WP_001096367.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 143304 143684 . + . ID=gene-RM672_RS04200;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=RM672_RS04200;old_locus_tag=RM672_04200 NZ_JAVRJS010000002.1 Protein Homology CDS 143304 143684 . + 0 ID=cds-WP_001284658.1;Parent=gene-RM672_RS04200;Dbxref=GenBank:WP_001284658.1;Name=WP_001284658.1;Ontology_term=GO:0045892;gbkey=CDS;gene=blaI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=RM672_RS04200;product=penicillinase repressor BlaI;protein_id=WP_001284658.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 143736 143891 . - . ID=gene-RM672_RS04205;Name=RM672_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04205;old_locus_tag=RM672_04205 NZ_JAVRJS010000002.1 Protein Homology CDS 143736 143891 . - 0 ID=cds-WP_182474594.1;Parent=gene-RM672_RS04205;Dbxref=GenBank:WP_182474594.1;Name=WP_182474594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834627.1;locus_tag=RM672_RS04205;product=hypothetical protein;protein_id=WP_182474594.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 144050 144499 . - . ID=gene-RM672_RS04210;Name=RM672_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04210;old_locus_tag=RM672_04210 NZ_JAVRJS010000002.1 Protein Homology CDS 144050 144499 . - 0 ID=cds-WP_103159400.1;Parent=gene-RM672_RS04210;Dbxref=GenBank:WP_103159400.1;Name=WP_103159400.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276697.1;locus_tag=RM672_RS04210;product=GNAT family N-acetyltransferase;protein_id=WP_103159400.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 144894 145532 . - . ID=gene-RM672_RS04215;Name=RM672_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04215;old_locus_tag=RM672_04215 NZ_JAVRJS010000002.1 Protein Homology CDS 144894 145532 . - 0 ID=cds-WP_051604934.1;Parent=gene-RM672_RS04215;Dbxref=GenBank:WP_051604934.1;Name=WP_051604934.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424690.1;locus_tag=RM672_RS04215;product=competence protein ComK;protein_id=WP_051604934.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 145804 145986 . + . ID=gene-RM672_RS04220;Name=RM672_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04220;old_locus_tag=RM672_04220 NZ_JAVRJS010000002.1 Protein Homology CDS 145804 145986 . + 0 ID=cds-WP_373368846.1;Parent=gene-RM672_RS04220;Dbxref=GenBank:WP_373368846.1;Name=WP_373368846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168467.1;locus_tag=RM672_RS04220;product=IDEAL domain-containing protein;protein_id=WP_373368846.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 146054 147046 . - . ID=gene-RM672_RS04225;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=RM672_RS04225;old_locus_tag=RM672_04225 NZ_JAVRJS010000002.1 Protein Homology CDS 146054 147046 . - 0 ID=cds-WP_103159398.1;Parent=gene-RM672_RS04225;Dbxref=GenBank:WP_103159398.1;Name=WP_103159398.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=RM672_RS04225;product=lipoate--protein ligase;protein_id=WP_103159398.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 147221 147406 . + . ID=gene-RM672_RS04230;Name=RM672_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04230;old_locus_tag=RM672_04230 NZ_JAVRJS010000002.1 Protein Homology CDS 147221 147406 . + 0 ID=cds-WP_037572105.1;Parent=gene-RM672_RS04230;Dbxref=GenBank:WP_037572105.1;Name=WP_037572105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=RM672_RS04230;product=YkvS family protein;protein_id=WP_037572105.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 147413 148015 . + . ID=gene-RM672_RS04235;Name=RM672_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04235;old_locus_tag=RM672_04235 NZ_JAVRJS010000002.1 Protein Homology CDS 147413 148015 . + 0 ID=cds-WP_103159397.1;Parent=gene-RM672_RS04235;Dbxref=GenBank:WP_103159397.1;Name=WP_103159397.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=RM672_RS04235;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_103159397.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 148098 149603 . - . ID=gene-RM672_RS04240;Name=RM672_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04240;old_locus_tag=RM672_04240 NZ_JAVRJS010000002.1 Protein Homology CDS 148098 149603 . - 0 ID=cds-WP_311541318.1;Parent=gene-RM672_RS04240;Dbxref=GenBank:WP_311541318.1;Name=WP_311541318.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424683.1;locus_tag=RM672_RS04240;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_311541318.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 149773 151131 . - . ID=gene-RM672_RS04245;Name=RM672_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04245;old_locus_tag=RM672_04245 NZ_JAVRJS010000002.1 Protein Homology CDS 149773 151131 . - 0 ID=cds-WP_311542464.1;Parent=gene-RM672_RS04245;Dbxref=GenBank:WP_311542464.1;Name=WP_311542464.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459487.1;locus_tag=RM672_RS04245;product=TrkH family potassium uptake protein;protein_id=WP_311542464.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 151148 152761 . - . ID=gene-RM672_RS04250;Name=RM672_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04250;old_locus_tag=RM672_04250 NZ_JAVRJS010000002.1 Protein Homology CDS 151148 152761 . - 0 ID=cds-WP_107366977.1;Parent=gene-RM672_RS04250;Dbxref=GenBank:WP_107366977.1;Name=WP_107366977.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=RM672_RS04250;product=S1C family serine protease;protein_id=WP_107366977.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 152913 153722 . - . ID=gene-RM672_RS04255;Name=RM672_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04255;old_locus_tag=RM672_04255 NZ_JAVRJS010000002.1 Protein Homology CDS 152913 153722 . - 0 ID=cds-WP_165806227.1;Parent=gene-RM672_RS04255;Dbxref=GenBank:WP_165806227.1;Name=WP_165806227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499510.1;locus_tag=RM672_RS04255;product=MeeY/MeeF family manganese export membrane protein;protein_id=WP_165806227.1;transl_table=11 NZ_JAVRJS010000002.1 cmsearch riboswitch 153799 153925 . - . ID=id-NZ_JAVRJS010000002.1:153799..153925;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00080,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000002.1 RefSeq gene 154003 155565 . - . ID=gene-RM672_RS04260;Name=RM672_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04260;old_locus_tag=RM672_04260 NZ_JAVRJS010000002.1 Protein Homology CDS 154003 155565 . - 0 ID=cds-WP_037572120.1;Parent=gene-RM672_RS04260;Dbxref=GenBank:WP_037572120.1;Name=WP_037572120.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485407.1;locus_tag=RM672_RS04260;product=peptide chain release factor 3;protein_id=WP_037572120.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 155578 155817 . - . ID=gene-RM672_RS04265;Name=RM672_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04265;old_locus_tag=RM672_04265 NZ_JAVRJS010000002.1 Protein Homology CDS 155578 155817 . - 0 ID=cds-WP_037572127.1;Parent=gene-RM672_RS04265;Dbxref=GenBank:WP_037572127.1;Name=WP_037572127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=RM672_RS04265;product=YueH family protein;protein_id=WP_037572127.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 155807 157291 . - . ID=gene-RM672_RS04270;Name=RM672_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04270;old_locus_tag=RM672_04270 NZ_JAVRJS010000002.1 Protein Homology CDS 155807 157291 . - 0 ID=cds-WP_107366975.1;Parent=gene-RM672_RS04270;Dbxref=GenBank:WP_107366975.1;Name=WP_107366975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=RM672_RS04270;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_107366975.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 157817 158992 . + . ID=gene-RM672_RS04275;Name=RM672_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04275;old_locus_tag=RM672_04275 NZ_JAVRJS010000002.1 Protein Homology CDS 157817 158992 . + 0 ID=cds-WP_103159394.1;Parent=gene-RM672_RS04275;Dbxref=GenBank:WP_103159394.1;Name=WP_103159394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303473.1;locus_tag=RM672_RS04275;product=diglucosyl diacylglycerol synthase;protein_id=WP_103159394.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 158970 160157 . + . ID=gene-RM672_RS04280;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=RM672_RS04280;old_locus_tag=RM672_04280 NZ_JAVRJS010000002.1 Protein Homology CDS 158970 160157 . + 0 ID=cds-WP_169301482.1;Parent=gene-RM672_RS04280;Dbxref=GenBank:WP_169301482.1;Name=WP_169301482.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303474.1;locus_tag=RM672_RS04280;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_169301482.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 160487 160996 . - . ID=gene-RM672_RS04285;Name=RM672_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04285;old_locus_tag=RM672_04285 NZ_JAVRJS010000002.1 Protein Homology CDS 160487 160996 . - 0 ID=cds-WP_107366973.1;Parent=gene-RM672_RS04285;Dbxref=GenBank:WP_107366973.1;Name=WP_107366973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494354.1;locus_tag=RM672_RS04285;product=2'-5' RNA ligase family protein;protein_id=WP_107366973.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 161047 161784 . - . ID=gene-RM672_RS04290;Name=RM672_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04290;old_locus_tag=RM672_04290 NZ_JAVRJS010000002.1 Protein Homology CDS 161047 161784 . - 0 ID=cds-WP_037573034.1;Parent=gene-RM672_RS04290;Dbxref=GenBank:WP_037573034.1;Name=WP_037573034.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450759.1;locus_tag=RM672_RS04290;product=esterase family protein;protein_id=WP_037573034.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 161961 163541 . - . ID=gene-RM672_RS04295;Name=RM672_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04295;old_locus_tag=RM672_04295 NZ_JAVRJS010000002.1 Protein Homology CDS 161961 163541 . - 0 ID=cds-WP_107366972.1;Parent=gene-RM672_RS04295;Dbxref=GenBank:WP_107366972.1;Name=WP_107366972.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899872.1;locus_tag=RM672_RS04295;product=alanine/glycine:cation symporter family protein;protein_id=WP_107366972.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 163741 164838 . + . ID=gene-RM672_RS04300;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=RM672_RS04300;old_locus_tag=RM672_04300 NZ_JAVRJS010000002.1 Protein Homology CDS 163741 164838 . + 0 ID=cds-WP_037572143.1;Parent=gene-RM672_RS04300;Dbxref=GenBank:WP_037572143.1;Name=WP_037572143.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=RM672_RS04300;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_037572143.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 164986 165756 . - . ID=gene-RM672_RS04305;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=RM672_RS04305;old_locus_tag=RM672_04305 NZ_JAVRJS010000002.1 Protein Homology CDS 164986 165756 . - 0 ID=cds-WP_103159392.1;Parent=gene-RM672_RS04305;Dbxref=GenBank:WP_103159392.1;Name=WP_103159392.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=RM672_RS04305;product=enoyl-ACP reductase FabI;protein_id=WP_103159392.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 165933 167768 . - . ID=gene-RM672_RS04310;Name=RM672_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04310;old_locus_tag=RM672_04310 NZ_JAVRJS010000002.1 Protein Homology CDS 165933 167768 . - 0 ID=cds-WP_311542465.1;Parent=gene-RM672_RS04310;Dbxref=GenBank:WP_311542465.1;Name=WP_311542465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=RM672_RS04310;product=monovalent cation:proton antiporter family protein;protein_id=WP_311542465.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 167779 169122 . - . ID=gene-RM672_RS04315;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=RM672_RS04315;old_locus_tag=RM672_04315 NZ_JAVRJS010000002.1 Protein Homology CDS 167779 169122 . - 0 ID=cds-WP_103159406.1;Parent=gene-RM672_RS04315;Dbxref=GenBank:WP_103159406.1;Name=WP_103159406.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383551.1;locus_tag=RM672_RS04315;product=magnesium transporter;protein_id=WP_103159406.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 169193 170047 . - . ID=gene-RM672_RS04320;Name=RM672_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04320;old_locus_tag=RM672_04320 NZ_JAVRJS010000002.1 Protein Homology CDS 169193 170047 . - 0 ID=cds-WP_105962985.1;Parent=gene-RM672_RS04320;Dbxref=GenBank:WP_105962985.1;Name=WP_105962985.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=RM672_RS04320;product=RluA family pseudouridine synthase;protein_id=WP_105962985.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 170044 170853 . - . ID=gene-RM672_RS04325;Name=RM672_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04325;old_locus_tag=RM672_04325 NZ_JAVRJS010000002.1 Protein Homology CDS 170044 170853 . - 0 ID=cds-WP_037572157.1;Parent=gene-RM672_RS04325;Dbxref=GenBank:WP_037572157.1;Name=WP_037572157.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=RM672_RS04325;product=NAD kinase;protein_id=WP_037572157.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 170853 171497 . - . ID=gene-RM672_RS04330;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=RM672_RS04330;old_locus_tag=RM672_04330 NZ_JAVRJS010000002.1 Protein Homology CDS 170853 171497 . - 0 ID=cds-WP_037572160.1;Parent=gene-RM672_RS04330;Dbxref=GenBank:WP_037572160.1;Name=WP_037572160.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424659.1;locus_tag=RM672_RS04330;product=GTP diphosphokinase;protein_id=WP_037572160.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 171514 171861 . - . ID=gene-RM672_RS04335;Name=RM672_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04335;old_locus_tag=RM672_04335 NZ_JAVRJS010000002.1 Protein Homology CDS 171514 171861 . - 0 ID=cds-WP_107370371.1;Parent=gene-RM672_RS04335;Dbxref=GenBank:WP_107370371.1;Name=WP_107370371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167279.1;locus_tag=RM672_RS04335;product=UPF0738 family protein;protein_id=WP_107370371.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 172063 172653 . + . ID=gene-RM672_RS04340;Name=RM672_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04340;old_locus_tag=RM672_04340 NZ_JAVRJS010000002.1 Protein Homology CDS 172063 172653 . + 0 ID=cds-WP_107366969.1;Parent=gene-RM672_RS04340;Dbxref=GenBank:WP_107366969.1;Name=WP_107366969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637390.1;locus_tag=RM672_RS04340;product=CYTH domain-containing protein;protein_id=WP_107366969.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 172742 173113 . + . ID=gene-RM672_RS04345;Name=RM672_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04345;old_locus_tag=RM672_04345 NZ_JAVRJS010000002.1 Protein Homology CDS 172742 173113 . + 0 ID=cds-WP_037572171.1;Parent=gene-RM672_RS04345;Dbxref=GenBank:WP_037572171.1;Name=WP_037572171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722302.1;locus_tag=RM672_RS04345;product=truncated hemoglobin YjbI;protein_id=WP_037572171.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 173128 173922 . + . ID=gene-RM672_RS04350;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=RM672_RS04350;old_locus_tag=RM672_04350 NZ_JAVRJS010000002.1 Protein Homology CDS 173128 173922 . + 0 ID=cds-WP_037572173.1;Parent=gene-RM672_RS04350;Dbxref=GenBank:WP_037572173.1;Name=WP_037572173.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=RM672_RS04350;product=protease adaptor protein YjbH;protein_id=WP_037572173.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 174182 175990 . - . ID=gene-RM672_RS04355;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM672_RS04355;old_locus_tag=RM672_04355 NZ_JAVRJS010000002.1 Protein Homology CDS 174182 175990 . - 0 ID=cds-WP_107366475.1;Parent=gene-RM672_RS04355;Dbxref=GenBank:WP_107366475.1;Name=WP_107366475.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=RM672_RS04355;product=oligoendopeptidase F;protein_id=WP_107366475.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 176061 177056 . - . ID=gene-RM672_RS04360;Name=RM672_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04360;old_locus_tag=RM672_04360 NZ_JAVRJS010000002.1 Protein Homology CDS 176061 177056 . - 0 ID=cds-WP_133172365.1;Parent=gene-RM672_RS04360;Dbxref=GenBank:WP_133172365.1;Name=WP_133172365.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF017832.8;locus_tag=RM672_RS04360;product=competence protein CoiA;protein_id=WP_133172365.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 177255 177968 . - . ID=gene-RM672_RS04365;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=RM672_RS04365;old_locus_tag=RM672_04365 NZ_JAVRJS010000002.1 Protein Homology CDS 177255 177968 . - 0 ID=cds-WP_037572185.1;Parent=gene-RM672_RS04365;Dbxref=GenBank:WP_037572185.1;Name=WP_037572185.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424650.1;locus_tag=RM672_RS04365;product=adaptor protein MecA;protein_id=WP_037572185.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 178194 178589 . - . ID=gene-RM672_RS04370;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=RM672_RS04370;old_locus_tag=RM672_04370 NZ_JAVRJS010000002.1 Protein Homology CDS 178194 178589 . - 0 ID=cds-WP_037572189.1;Parent=gene-RM672_RS04370;Dbxref=GenBank:WP_037572189.1;Name=WP_037572189.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=RM672_RS04370;product=transcriptional regulator SpxA;protein_id=WP_037572189.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 178894 179886 . + . ID=gene-RM672_RS04375;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=RM672_RS04375;old_locus_tag=RM672_04375 NZ_JAVRJS010000002.1 Protein Homology CDS 178894 179886 . + 0 ID=cds-WP_037572193.1;Parent=gene-RM672_RS04375;Dbxref=GenBank:WP_037572193.1;Name=WP_037572193.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424648.1;locus_tag=RM672_RS04375;product=tryptophan--tRNA ligase;protein_id=WP_037572193.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 180001 181626 . - . ID=gene-RM672_RS04380;Name=RM672_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04380;old_locus_tag=RM672_04380 NZ_JAVRJS010000002.1 Protein Homology CDS 180001 181626 . - 0 ID=cds-WP_311541336.1;Parent=gene-RM672_RS04380;Dbxref=GenBank:WP_311541336.1;Name=WP_311541336.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=RM672_RS04380;product=peptide ABC transporter substrate-binding protein;protein_id=WP_311541336.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 181692 182630 . - . ID=gene-RM672_RS04385;Name=RM672_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04385;old_locus_tag=RM672_04385 NZ_JAVRJS010000002.1 Protein Homology CDS 181692 182630 . - 0 ID=cds-WP_037572198.1;Parent=gene-RM672_RS04385;Dbxref=GenBank:WP_037572198.1;Name=WP_037572198.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459519.1;locus_tag=RM672_RS04385;product=ABC transporter ATP-binding protein;protein_id=WP_037572198.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 182630 183703 . - . ID=gene-RM672_RS04390;Name=RM672_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04390;old_locus_tag=RM672_04390 NZ_JAVRJS010000002.1 Protein Homology CDS 182630 183703 . - 0 ID=cds-WP_037572201.1;Parent=gene-RM672_RS04390;Dbxref=GenBank:WP_037572201.1;Name=WP_037572201.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424645.1;locus_tag=RM672_RS04390;product=ABC transporter ATP-binding protein;protein_id=WP_037572201.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 183718 184779 . - . ID=gene-RM672_RS04395;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=RM672_RS04395;old_locus_tag=RM672_04395 NZ_JAVRJS010000002.1 Protein Homology CDS 183718 184779 . - 0 ID=cds-WP_037572204.1;Parent=gene-RM672_RS04395;Dbxref=GenBank:WP_037572204.1;Name=WP_037572204.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=RM672_RS04395;product=oligopeptide ABC transporter permease;protein_id=WP_037572204.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 184779 185705 . - . ID=gene-RM672_RS04400;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=RM672_RS04400;old_locus_tag=RM672_04400 NZ_JAVRJS010000002.1 Protein Homology CDS 184779 185705 . - 0 ID=cds-WP_105965169.1;Parent=gene-RM672_RS04400;Dbxref=GenBank:WP_105965169.1;Name=WP_105965169.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=RM672_RS04400;product=oligopeptide ABC transporter permease;protein_id=WP_105965169.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 185952 186332 . + . ID=gene-RM672_RS04405;Name=RM672_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04405;old_locus_tag=RM672_04405 NZ_JAVRJS010000002.1 Protein Homology CDS 185952 186332 . + 0 ID=cds-WP_037572210.1;Parent=gene-RM672_RS04405;Dbxref=GenBank:WP_037572210.1;Name=WP_037572210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024438.7;locus_tag=RM672_RS04405;product=DUF3899 domain-containing protein;protein_id=WP_037572210.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 186653 187897 . - . ID=gene-RM672_RS04410;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=RM672_RS04410;old_locus_tag=RM672_04410 NZ_JAVRJS010000002.1 Protein Homology CDS 186653 187897 . - 0 ID=cds-WP_105965168.1;Parent=gene-RM672_RS04410;Dbxref=GenBank:WP_105965168.1;Name=WP_105965168.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=RM672_RS04410;product=beta-ketoacyl-ACP synthase II;protein_id=WP_105965168.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 187914 188855 . - . ID=gene-RM672_RS04415;Name=RM672_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04415;old_locus_tag=RM672_04415 NZ_JAVRJS010000002.1 Protein Homology CDS 187914 188855 . - 0 ID=cds-WP_105965167.1;Parent=gene-RM672_RS04415;Dbxref=GenBank:WP_105965167.1;Name=WP_105965167.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=RM672_RS04415;product=beta-ketoacyl-ACP synthase III;protein_id=WP_105965167.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 189006 189206 . + . ID=gene-RM672_RS04420;Name=RM672_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04420;old_locus_tag=RM672_04420 NZ_JAVRJS010000002.1 Protein Homology CDS 189006 189206 . + 0 ID=cds-WP_037572217.1;Parent=gene-RM672_RS04420;Dbxref=GenBank:WP_037572217.1;Name=WP_037572217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165998.1;locus_tag=RM672_RS04420;product=DUF2929 family protein;protein_id=WP_037572217.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 189342 191951 . - . ID=gene-RM672_RS04425;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=RM672_RS04425;old_locus_tag=RM672_04425 NZ_JAVRJS010000002.1 Protein Homology CDS 189342 191951 . - 0 ID=cds-WP_037572219.1;Parent=gene-RM672_RS04425;Dbxref=GenBank:WP_037572219.1;Name=WP_037572219.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167299.1;locus_tag=RM672_RS04425;product=ATP-dependent chaperone ClpB;protein_id=WP_037572219.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 192177 192485 . - . ID=gene-RM672_RS04430;Name=RM672_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04430;old_locus_tag=RM672_04430 NZ_JAVRJS010000002.1 Protein Homology CDS 192177 192485 . - 0 ID=cds-WP_037572221.1;Parent=gene-RM672_RS04430;Dbxref=GenBank:WP_037572221.1;Name=WP_037572221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=RM672_RS04430;product=metal-sulfur cluster assembly factor;protein_id=WP_037572221.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 192598 193434 . + . ID=gene-RM672_RS04435;Name=RM672_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04435;old_locus_tag=RM672_04435 NZ_JAVRJS010000002.1 Protein Homology CDS 192598 193434 . + 0 ID=cds-WP_037572223.1;Parent=gene-RM672_RS04435;Dbxref=GenBank:WP_037572223.1;Name=WP_037572223.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483780.1;locus_tag=RM672_RS04435;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037572223.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 193437 194759 . + . ID=gene-RM672_RS04440;Name=RM672_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04440;old_locus_tag=RM672_04440 NZ_JAVRJS010000002.1 Protein Homology CDS 193437 194759 . + 0 ID=cds-WP_105996721.1;Parent=gene-RM672_RS04440;Dbxref=GenBank:WP_105996721.1;Name=WP_105996721.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=RM672_RS04440;product=CoA-disulfide reductase;protein_id=WP_105996721.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 194906 195295 . - . ID=gene-RM672_RS04445;Name=RM672_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04445;old_locus_tag=RM672_04445 NZ_JAVRJS010000002.1 Protein Homology CDS 194906 195295 . - 0 ID=cds-WP_037572226.1;Parent=gene-RM672_RS04445;Dbxref=GenBank:WP_037572226.1;Name=WP_037572226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=RM672_RS04445;product=YisL family protein;protein_id=WP_037572226.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 195548 196450 . - . ID=gene-RM672_RS04450;Name=RM672_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04450;old_locus_tag=RM672_04450 NZ_JAVRJS010000002.1 Protein Homology CDS 195548 196450 . - 0 ID=cds-WP_037572227.1;Parent=gene-RM672_RS04450;Dbxref=GenBank:WP_037572227.1;Name=WP_037572227.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499459.1;locus_tag=RM672_RS04450;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_037572227.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 196529 200167 . - . ID=gene-RM672_RS04455;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=RM672_RS04455;old_locus_tag=RM672_04455 NZ_JAVRJS010000002.1 Protein Homology CDS 196529 200167 . - 0 ID=cds-WP_311541320.1;Parent=gene-RM672_RS04455;Dbxref=GenBank:WP_311541320.1;Name=WP_311541320.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235847.1;locus_tag=RM672_RS04455;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_311541320.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 200154 203615 . - . ID=gene-RM672_RS04460;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=RM672_RS04460;old_locus_tag=RM672_04460 NZ_JAVRJS010000002.1 Protein Homology CDS 200154 203615 . - 0 ID=cds-WP_037572232.1;Parent=gene-RM672_RS04460;Dbxref=GenBank:WP_037572232.1;Name=WP_037572232.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=RM672_RS04460;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_037572232.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 203915 204496 . - . ID=gene-RM672_RS04465;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM672_RS04465;old_locus_tag=RM672_04465 NZ_JAVRJS010000002.1 Protein Homology CDS 203915 204496 . - 0 ID=cds-WP_037573035.1;Parent=gene-RM672_RS04465;Dbxref=GenBank:WP_037573035.1;Name=WP_037573035.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424628.1;locus_tag=RM672_RS04465;product=signal peptidase I;protein_id=WP_037573035.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 204508 205029 . - . ID=gene-RM672_RS04470;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM672_RS04470;old_locus_tag=RM672_04470 NZ_JAVRJS010000002.1 Protein Homology CDS 204508 205029 . - 0 ID=cds-WP_037572234.1;Parent=gene-RM672_RS04470;Dbxref=GenBank:WP_037572234.1;Name=WP_037572234.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: protein motif:HMM:NF021981.7;locus_tag=RM672_RS04470;product=signal peptidase I;protein_id=WP_037572234.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 205174 206505 . - . ID=gene-RM672_RS04475;Name=RM672_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04475;old_locus_tag=RM672_04475 NZ_JAVRJS010000002.1 Protein Homology CDS 205174 206505 . - 0 ID=cds-WP_037572236.1;Parent=gene-RM672_RS04475;Dbxref=GenBank:WP_037572236.1;Name=WP_037572236.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=RM672_RS04475;product=glucose-6-phosphate isomerase;protein_id=WP_037572236.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 206694 207899 . + . ID=gene-RM672_RS04480;Name=RM672_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04480;old_locus_tag=RM672_04480 NZ_JAVRJS010000002.1 Protein Homology CDS 206694 207899 . + 0 ID=cds-WP_037572239.1;Parent=gene-RM672_RS04480;Dbxref=GenBank:WP_037572239.1;Name=WP_037572239.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637420.1;locus_tag=RM672_RS04480;product=argininosuccinate synthase;protein_id=WP_037572239.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 207892 209265 . + . ID=gene-RM672_RS04485;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=RM672_RS04485;old_locus_tag=RM672_04485 NZ_JAVRJS010000002.1 Protein Homology CDS 207892 209265 . + 0 ID=cds-WP_103159382.1;Parent=gene-RM672_RS04485;Dbxref=GenBank:WP_103159382.1;Name=WP_103159382.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481867.1;locus_tag=RM672_RS04485;product=argininosuccinate lyase;protein_id=WP_103159382.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 209419 210354 . + . ID=gene-RM672_RS04490;Name=RM672_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04490;old_locus_tag=RM672_04490 NZ_JAVRJS010000002.1 Protein Homology CDS 209419 210354 . + 0 ID=cds-WP_103158908.1;Parent=gene-RM672_RS04490;Dbxref=GenBank:WP_103158908.1;Name=WP_103158908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175845.1;locus_tag=RM672_RS04490;product=glycerophosphodiester phosphodiesterase;protein_id=WP_103158908.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 210407 211651 . - . ID=gene-RM672_RS04495;Name=RM672_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04495;old_locus_tag=RM672_04495 NZ_JAVRJS010000002.1 Protein Homology CDS 210407 211651 . - 0 ID=cds-WP_103158907.1;Parent=gene-RM672_RS04495;Dbxref=GenBank:WP_103158907.1;Name=WP_103158907.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=RM672_RS04495;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_103158907.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 211812 213011 . - . ID=gene-RM672_RS04500;Name=RM672_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04500;old_locus_tag=RM672_04500 NZ_JAVRJS010000002.1 Protein Homology CDS 211812 213011 . - 0 ID=cds-WP_103158906.1;Parent=gene-RM672_RS04500;Dbxref=GenBank:WP_103158906.1;Name=WP_103158906.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424621.1;locus_tag=RM672_RS04500;product=ornithine--oxo-acid transaminase;protein_id=WP_103158906.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 213235 214779 . - . ID=gene-RM672_RS04505;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=RM672_RS04505;old_locus_tag=RM672_04505 NZ_JAVRJS010000002.1 Protein Homology CDS 213235 214779 . - 0 ID=cds-WP_037572253.1;Parent=gene-RM672_RS04505;Dbxref=GenBank:WP_037572253.1;Name=WP_037572253.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=RM672_RS04505;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_037572253.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 215111 215497 . - . ID=gene-RM672_RS04510;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=RM672_RS04510;old_locus_tag=RM672_04510 NZ_JAVRJS010000002.1 Protein Homology CDS 215111 215497 . - 0 ID=cds-WP_037572258.1;Parent=gene-RM672_RS04510;Dbxref=GenBank:WP_037572258.1;Name=WP_037572258.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=RM672_RS04510;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_037572258.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 215663 215932 . - . ID=gene-RM672_RS04515;Name=RM672_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04515;old_locus_tag=RM672_04515 NZ_JAVRJS010000002.1 Protein Homology CDS 215663 215932 . - 0 ID=cds-WP_037572261.1;Parent=gene-RM672_RS04515;Dbxref=GenBank:WP_037572261.1;Name=WP_037572261.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=RM672_RS04515;product=FmdB family zinc ribbon protein;protein_id=WP_037572261.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 215932 217122 . - . ID=gene-RM672_RS04520;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=RM672_RS04520;old_locus_tag=RM672_04520 NZ_JAVRJS010000002.1 Protein Homology CDS 215932 217122 . - 0 ID=cds-WP_037572263.1;Parent=gene-RM672_RS04520;Dbxref=GenBank:WP_037572263.1;Name=WP_037572263.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383466.1;locus_tag=RM672_RS04520;product=formamidase;protein_id=WP_037572263.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 217533 217796 . - . ID=gene-RM672_RS04525;Name=RM672_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04525;old_locus_tag=RM672_04525 NZ_JAVRJS010000002.1 Protein Homology CDS 217533 217796 . - 0 ID=cds-WP_311542466.1;Parent=gene-RM672_RS04525;Dbxref=GenBank:WP_311542466.1;Name=WP_311542466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=RM672_RS04525;product=DUF1871 family protein;protein_id=WP_311542466.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 217830 218435 . - . ID=gene-RM672_RS04530;Name=RM672_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04530;old_locus_tag=RM672_04530 NZ_JAVRJS010000002.1 Protein Homology CDS 217830 218435 . - 0 ID=cds-WP_037572270.1;Parent=gene-RM672_RS04530;Dbxref=GenBank:WP_037572270.1;Name=WP_037572270.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276264.1;locus_tag=RM672_RS04530;product=peptidylprolyl isomerase;protein_id=WP_037572270.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 218508 218888 . + . ID=gene-RM672_RS04535;Name=RM672_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04535;old_locus_tag=RM672_04535 NZ_JAVRJS010000002.1 Protein Homology CDS 218508 218888 . + 0 ID=cds-WP_037572273.1;Parent=gene-RM672_RS04535;Dbxref=GenBank:WP_037572273.1;Name=WP_037572273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831990.1;locus_tag=RM672_RS04535;product=kinase-associated lipoprotein B;protein_id=WP_037572273.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 219030 221447 . + . ID=gene-RM672_RS04540;Name=RM672_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04540;old_locus_tag=RM672_04540 NZ_JAVRJS010000002.1 Protein Homology CDS 219030 221447 . + 0 ID=cds-WP_103158904.1;Parent=gene-RM672_RS04540;Dbxref=GenBank:WP_103158904.1;Name=WP_103158904.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=RM672_RS04540;product=Na+/H+ antiporter subunit A;protein_id=WP_103158904.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 221410 221856 . + . ID=gene-RM672_RS04545;Name=RM672_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04545;old_locus_tag=RM672_04545 NZ_JAVRJS010000002.1 Protein Homology CDS 221410 221856 . + 0 ID=cds-WP_084275994.1;Parent=gene-RM672_RS04545;Dbxref=GenBank:WP_084275994.1;Name=WP_084275994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=RM672_RS04545;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_084275994.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 221856 222203 . + . ID=gene-RM672_RS04550;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=RM672_RS04550;old_locus_tag=RM672_04550 NZ_JAVRJS010000002.1 Protein Homology CDS 221856 222203 . + 0 ID=cds-WP_037572280.1;Parent=gene-RM672_RS04550;Dbxref=GenBank:WP_037572280.1;Name=WP_037572280.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614416.1;locus_tag=RM672_RS04550;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_037572280.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 222193 223692 . + . ID=gene-RM672_RS04555;Name=RM672_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04555;old_locus_tag=RM672_04555 NZ_JAVRJS010000002.1 Protein Homology CDS 222193 223692 . + 0 ID=cds-WP_037572282.1;Parent=gene-RM672_RS04555;Dbxref=GenBank:WP_037572282.1;Name=WP_037572282.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722348.1;locus_tag=RM672_RS04555;product=Na+/H+ antiporter subunit D;protein_id=WP_037572282.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 223693 224175 . + . ID=gene-RM672_RS04560;Name=RM672_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04560;old_locus_tag=RM672_04560 NZ_JAVRJS010000002.1 Protein Homology CDS 223693 224175 . + 0 ID=cds-WP_037572284.1;Parent=gene-RM672_RS04560;Dbxref=GenBank:WP_037572284.1;Name=WP_037572284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=RM672_RS04560;product=Na+/H+ antiporter subunit E;protein_id=WP_037572284.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 224172 224465 . + . ID=gene-RM672_RS04565;Name=RM672_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04565;old_locus_tag=RM672_04565 NZ_JAVRJS010000002.1 Protein Homology CDS 224172 224465 . + 0 ID=cds-WP_037572285.1;Parent=gene-RM672_RS04565;Dbxref=GenBank:WP_037572285.1;Name=WP_037572285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=RM672_RS04565;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_037572285.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 224443 224799 . + . ID=gene-RM672_RS04570;Name=RM672_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04570;old_locus_tag=RM672_04570 NZ_JAVRJS010000002.1 Protein Homology CDS 224443 224799 . + 0 ID=cds-WP_037572287.1;Parent=gene-RM672_RS04570;Dbxref=GenBank:WP_037572287.1;Name=WP_037572287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=RM672_RS04570;product=Na+/H+ antiporter subunit G1;protein_id=WP_037572287.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 224862 225236 . - . ID=gene-RM672_RS04575;Name=RM672_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04575;old_locus_tag=RM672_04575 NZ_JAVRJS010000002.1 Protein Homology CDS 224862 225236 . - 0 ID=cds-WP_103158902.1;Parent=gene-RM672_RS04575;Dbxref=GenBank:WP_103158902.1;Name=WP_103158902.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467045.1;locus_tag=RM672_RS04575;product=PaaI family thioesterase;protein_id=WP_103158902.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 225258 226571 . - . ID=gene-RM672_RS04580;Name=RM672_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04580;old_locus_tag=RM672_04580 NZ_JAVRJS010000002.1 Protein Homology CDS 225258 226571 . - 0 ID=cds-WP_105962979.1;Parent=gene-RM672_RS04580;Dbxref=GenBank:WP_105962979.1;Name=WP_105962979.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=RM672_RS04580;product=Na+/H+ antiporter family protein;protein_id=WP_105962979.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 226707 228185 . - . ID=gene-RM672_RS04585;Name=RM672_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04585;old_locus_tag=RM672_04585 NZ_JAVRJS010000002.1 Protein Homology CDS 226707 228185 . - 0 ID=cds-WP_311542467.1;Parent=gene-RM672_RS04585;Dbxref=GenBank:WP_311542467.1;Name=WP_311542467.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383447.1;locus_tag=RM672_RS04585;product=M17 family metallopeptidase;protein_id=WP_311542467.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 228267 229469 . - . ID=gene-RM672_RS04590;Name=RM672_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04590;old_locus_tag=RM672_04590 NZ_JAVRJS010000002.1 Protein Homology CDS 228267 229469 . - 0 ID=cds-WP_037572298.1;Parent=gene-RM672_RS04590;Dbxref=GenBank:WP_037572298.1;Name=WP_037572298.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=RM672_RS04590;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572298.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 229716 230075 . - . ID=gene-RM672_RS04595;Name=RM672_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04595;old_locus_tag=RM672_04595 NZ_JAVRJS010000002.1 Protein Homology CDS 229716 230075 . - 0 ID=cds-WP_103158899.1;Parent=gene-RM672_RS04595;Dbxref=GenBank:WP_103158899.1;Name=WP_103158899.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=RM672_RS04595;product=HesB/IscA family protein;protein_id=WP_103158899.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 230089 230325 . - . ID=gene-RM672_RS04600;Name=RM672_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04600;old_locus_tag=RM672_04600 NZ_JAVRJS010000002.1 Protein Homology CDS 230089 230325 . - 0 ID=cds-WP_103158898.1;Parent=gene-RM672_RS04600;Dbxref=GenBank:WP_103158898.1;Name=WP_103158898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499429.1;locus_tag=RM672_RS04600;product=YuzB family protein;protein_id=WP_103158898.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 230621 231685 . + . ID=gene-RM672_RS04605;Name=RM672_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04605;old_locus_tag=RM672_04605 NZ_JAVRJS010000002.1 Protein Homology CDS 230621 231685 . + 0 ID=cds-WP_037572307.1;Parent=gene-RM672_RS04605;Dbxref=GenBank:WP_037572307.1;Name=WP_037572307.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794016.1;locus_tag=RM672_RS04605;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572307.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 232027 232347 . - . ID=gene-RM672_RS04610;Name=RM672_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04610;old_locus_tag=RM672_04610 NZ_JAVRJS010000002.1 Protein Homology CDS 232027 232347 . - 0 ID=cds-WP_105962978.1;Parent=gene-RM672_RS04610;Dbxref=GenBank:WP_105962978.1;Name=WP_105962978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276281.1;locus_tag=RM672_RS04610;product=YuzD family protein;protein_id=WP_105962978.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 232452 232694 . + . ID=gene-RM672_RS04615;Name=RM672_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04615;old_locus_tag=RM672_04615 NZ_JAVRJS010000002.1 Protein Homology CDS 232452 232694 . + 0 ID=cds-WP_037572314.1;Parent=gene-RM672_RS04615;Dbxref=GenBank:WP_037572314.1;Name=WP_037572314.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=RM672_RS04615;product=NifU family protein;protein_id=WP_037572314.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 232838 233986 . - . ID=gene-RM672_RS04620;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=RM672_RS04620;old_locus_tag=RM672_04620 NZ_JAVRJS010000002.1 Protein Homology CDS 232838 233986 . - 0 ID=cds-WP_037572317.1;Parent=gene-RM672_RS04620;Dbxref=GenBank:WP_037572317.1;Name=WP_037572317.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424679.1;locus_tag=RM672_RS04620;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_037572317.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 233983 234219 . - . ID=gene-RM672_RS04625;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=RM672_RS04625;old_locus_tag=RM672_04625 NZ_JAVRJS010000002.1 Protein Homology CDS 233983 234219 . - 0 ID=cds-WP_103158897.1;Parent=gene-RM672_RS04625;Dbxref=GenBank:WP_103158897.1;Name=WP_103158897.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=RM672_RS04625;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WP_103158897.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 234236 235456 . - . ID=gene-RM672_RS04630;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=RM672_RS04630;old_locus_tag=RM672_04630 NZ_JAVRJS010000002.1 Protein Homology CDS 234236 235456 . - 0 ID=cds-WP_037572322.1;Parent=gene-RM672_RS04630;Dbxref=GenBank:WP_037572322.1;Name=WP_037572322.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=RM672_RS04630;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_037572322.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 235453 236907 . - . ID=gene-RM672_RS04635;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=RM672_RS04635;old_locus_tag=RM672_04635 NZ_JAVRJS010000002.1 Protein Homology CDS 235453 236907 . - 0 ID=cds-WP_103158896.1;Parent=gene-RM672_RS04635;Dbxref=GenBank:WP_103158896.1;Name=WP_103158896.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129644.1;locus_tag=RM672_RS04635;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_103158896.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 236926 237057 . - . ID=gene-RM672_RS04640;Name=RM672_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04640;old_locus_tag=RM672_04640 NZ_JAVRJS010000002.1 Protein Homology CDS 236926 237057 . - 0 ID=cds-WP_084275967.1;Parent=gene-RM672_RS04640;Dbxref=GenBank:WP_084275967.1;Name=WP_084275967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=RM672_RS04640;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_084275967.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq pseudogene 237553 237942 . + . ID=gene-RM672_RS04645;Name=RM672_RS04645;end_range=237942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS04645;old_locus_tag=RM672_04645;partial=true;pseudo=true NZ_JAVRJS010000002.1 Protein Homology CDS 237553 237942 . + 0 ID=cds-RM672_RS04645;Parent=gene-RM672_RS04645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=237942,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277741.1;locus_tag=RM672_RS04645;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JAVRJS010000002.1 RefSeq pseudogene 237997 238155 . + . ID=gene-RM672_RS04650;Name=RM672_RS04650;end_range=238155,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS04650;old_locus_tag=RM672_04650;partial=true;pseudo=true NZ_JAVRJS010000002.1 Protein Homology CDS 237997 238155 . + 0 ID=cds-RM672_RS04650;Parent=gene-RM672_RS04650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=238155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM672_RS04650;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 238385 240043 . - . ID=gene-RM672_RS04655;Name=RM672_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04655;old_locus_tag=RM672_04655 NZ_JAVRJS010000002.1 Protein Homology CDS 238385 240043 . - 0 ID=cds-WP_311541321.1;Parent=gene-RM672_RS04655;Dbxref=GenBank:WP_311541321.1;Name=WP_311541321.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275704.1;locus_tag=RM672_RS04655;product=glycoside hydrolase family 13 protein;protein_id=WP_311541321.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 240357 241352 . + . ID=gene-RM672_RS04660;Name=RM672_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04660;old_locus_tag=RM672_04660 NZ_JAVRJS010000002.1 Protein Homology CDS 240357 241352 . + 0 ID=cds-WP_311542468.1;Parent=gene-RM672_RS04660;Dbxref=GenBank:WP_311542468.1;Name=WP_311542468.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004436347.1;locus_tag=RM672_RS04660;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_311542468.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 241611 242906 . + . ID=gene-RM672_RS04665;Name=RM672_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04665;old_locus_tag=RM672_04665 NZ_JAVRJS010000002.1 Protein Homology CDS 241611 242906 . + 0 ID=cds-WP_232160109.1;Parent=gene-RM672_RS04665;Dbxref=GenBank:WP_232160109.1;Name=WP_232160109.1;Ontology_term=GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010632377.1;locus_tag=RM672_RS04665;product=SLC45 family MFS transporter;protein_id=WP_232160109.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 242967 243272 . + . ID=gene-RM672_RS11410;Name=RM672_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11410 NZ_JAVRJS010000002.1 Protein Homology CDS 242967 243272 . + 0 ID=cds-WP_275129051.1;Parent=gene-RM672_RS11410;Dbxref=GenBank:WP_275129051.1;Name=WP_275129051.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.7;locus_tag=RM672_RS11410;product=DDE-type integrase/transposase/recombinase;protein_id=WP_275129051.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq pseudogene 243309 243983 . + . ID=gene-RM672_RS04670;Name=RM672_RS04670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS04670;old_locus_tag=RM672_04670;pseudo=true NZ_JAVRJS010000002.1 Protein Homology CDS 243309 243983 . + 0 ID=cds-RM672_RS04670;Parent=gene-RM672_RS04670;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM672_RS04670;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 244182 245177 . + . ID=gene-RM672_RS04675;Name=RM672_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04675;old_locus_tag=RM672_04675 NZ_JAVRJS010000002.1 Protein Homology CDS 244182 245177 . + 0 ID=cds-WP_165806187.1;Parent=gene-RM672_RS04675;Dbxref=GenBank:WP_165806187.1;Name=WP_165806187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013752.7;locus_tag=RM672_RS04675;product=transposase;protein_id=WP_165806187.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 245346 246311 . - . ID=gene-RM672_RS04680;Name=RM672_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04680;old_locus_tag=RM672_04680 NZ_JAVRJS010000002.1 Protein Homology CDS 245346 246311 . - 0 ID=cds-WP_037572337.1;Parent=gene-RM672_RS04680;Dbxref=GenBank:WP_037572337.1;Name=WP_037572337.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=RM672_RS04680;product=2-hydroxyacid dehydrogenase;protein_id=WP_037572337.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 246304 247101 . - . ID=gene-RM672_RS04685;Name=nucF;gbkey=Gene;gene=nucF;gene_biotype=protein_coding;gene_synonym=yutF;locus_tag=RM672_RS04685;old_locus_tag=RM672_04685 NZ_JAVRJS010000002.1 Protein Homology CDS 246304 247101 . - 0 ID=cds-WP_037572340.1;Parent=gene-RM672_RS04685;Dbxref=GenBank:WP_037572340.1;Name=WP_037572340.1;Ontology_term=GO:0008253,GO:0016791,GO:0046872;gbkey=CDS;gene=nucF;go_function=5'-nucleotidase activity|0008253||IEA,phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424595.1;locus_tag=RM672_RS04685;product=5' nucleotidase NucF;protein_id=WP_037572340.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 247098 247535 . - . ID=gene-RM672_RS04690;Name=RM672_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04690;old_locus_tag=RM672_04690 NZ_JAVRJS010000002.1 Protein Homology CDS 247098 247535 . - 0 ID=cds-WP_037572343.1;Parent=gene-RM672_RS04690;Dbxref=GenBank:WP_037572343.1;Name=WP_037572343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424594.1;locus_tag=RM672_RS04690;product=DUF86 domain-containing protein;protein_id=WP_037572343.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 247634 247900 . + . ID=gene-RM672_RS04695;Name=RM672_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04695;old_locus_tag=RM672_04695 NZ_JAVRJS010000002.1 Protein Homology CDS 247634 247900 . + 0 ID=cds-WP_103158895.1;Parent=gene-RM672_RS04695;Dbxref=GenBank:WP_103158895.1;Name=WP_103158895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=RM672_RS04695;product=DUF3055 domain-containing protein;protein_id=WP_103158895.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 248033 248785 . - . ID=gene-RM672_RS04700;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM672_RS04700;old_locus_tag=RM672_04700 NZ_JAVRJS010000002.1 Protein Homology CDS 248033 248785 . - 0 ID=cds-WP_157946078.1;Parent=gene-RM672_RS04700;Dbxref=GenBank:WP_157946078.1;Name=WP_157946078.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: protein motif:HMM:NF014186.8;locus_tag=RM672_RS04700;product=membrane protein insertase YidC;protein_id=WP_157946078.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 249031 249396 . - . ID=gene-RM672_RS04705;Name=RM672_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04705;old_locus_tag=RM672_04705 NZ_JAVRJS010000002.1 Protein Homology CDS 249031 249396 . - 0 ID=cds-WP_037572349.1;Parent=gene-RM672_RS04705;Dbxref=GenBank:WP_037572349.1;Name=WP_037572349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=RM672_RS04705;product=YutD family protein;protein_id=WP_037572349.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 249414 250331 . - . ID=gene-RM672_RS04710;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=RM672_RS04710;old_locus_tag=RM672_04710 NZ_JAVRJS010000002.1 Protein Homology CDS 249414 250331 . - 0 ID=cds-WP_037572352.1;Parent=gene-RM672_RS04710;Dbxref=GenBank:WP_037572352.1;Name=WP_037572352.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448197.1;locus_tag=RM672_RS04710;product=lipoyl synthase;protein_id=WP_037572352.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 250415 251734 . - . ID=gene-RM672_RS04715;Name=RM672_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04715;old_locus_tag=RM672_04715 NZ_JAVRJS010000002.1 Protein Homology CDS 250415 251734 . - 0 ID=cds-WP_037572354.1;Parent=gene-RM672_RS04715;Dbxref=GenBank:WP_037572354.1;Name=WP_037572354.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424590.1;locus_tag=RM672_RS04715;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_037572354.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 251747 252571 . - . ID=gene-RM672_RS04720;Name=RM672_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04720;old_locus_tag=RM672_04720 NZ_JAVRJS010000002.1 Protein Homology CDS 251747 252571 . - 0 ID=cds-WP_037572356.1;Parent=gene-RM672_RS04720;Dbxref=GenBank:WP_037572356.1;Name=WP_037572356.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469689.1;locus_tag=RM672_RS04720;product=sulfite exporter TauE/SafE family protein;protein_id=WP_037572356.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 252587 253435 . - . ID=gene-RM672_RS04725;Name=RM672_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04725;old_locus_tag=RM672_04725 NZ_JAVRJS010000002.1 Protein Homology CDS 252587 253435 . - 0 ID=cds-WP_103158910.1;Parent=gene-RM672_RS04725;Dbxref=GenBank:WP_103158910.1;Name=WP_103158910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=RM672_RS04725;product=DUF72 domain-containing protein;protein_id=WP_103158910.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 253559 254254 . + . ID=gene-RM672_RS04730;Name=RM672_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04730;old_locus_tag=RM672_04730 NZ_JAVRJS010000002.1 Protein Homology CDS 253559 254254 . + 0 ID=cds-WP_037572359.1;Parent=gene-RM672_RS04730;Dbxref=GenBank:WP_037572359.1;Name=WP_037572359.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480031.1;locus_tag=RM672_RS04730;product=alpha/beta hydrolase;protein_id=WP_037572359.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq pseudogene 254346 255423 . - . ID=gene-RM672_RS04740;Name=RM672_RS04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS04740;old_locus_tag=RM672_04740;pseudo=true NZ_JAVRJS010000002.1 Protein Homology CDS 254346 255423 . - 0 ID=cds-RM672_RS04740;Parent=gene-RM672_RS04740;Note=frameshifted;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168757.1;locus_tag=RM672_RS04740;product=NAD(P)H-dependent flavin oxidoreductase;pseudo=true;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 255988 256983 . - . ID=gene-RM672_RS04745;Name=RM672_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04745;old_locus_tag=RM672_04745 NZ_JAVRJS010000002.1 Protein Homology CDS 255988 256983 . - 0 ID=cds-WP_037572362.1;Parent=gene-RM672_RS04745;Dbxref=GenBank:WP_037572362.1;Name=WP_037572362.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=RM672_RS04745;product=hemolysin family protein;protein_id=WP_037572362.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 257207 258604 . - . ID=gene-RM672_RS04750;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=RM672_RS04750;old_locus_tag=RM672_04750 NZ_JAVRJS010000002.1 Protein Homology CDS 257207 258604 . - 0 ID=cds-WP_037572364.1;Parent=gene-RM672_RS04750;Dbxref=GenBank:WP_037572364.1;Name=WP_037572364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=RM672_RS04750;product=Fe-S cluster assembly protein SufB;protein_id=WP_037572364.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 258679 259128 . - . ID=gene-RM672_RS04755;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=RM672_RS04755;old_locus_tag=RM672_04755 NZ_JAVRJS010000002.1 Protein Homology CDS 258679 259128 . - 0 ID=cds-WP_037572365.1;Parent=gene-RM672_RS04755;Dbxref=GenBank:WP_037572365.1;Name=WP_037572365.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=RM672_RS04755;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_037572365.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 259118 260359 . - . ID=gene-RM672_RS04760;Name=RM672_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04760;old_locus_tag=RM672_04760 NZ_JAVRJS010000002.1 Protein Homology CDS 259118 260359 . - 0 ID=cds-WP_037573049.1;Parent=gene-RM672_RS04760;Dbxref=GenBank:WP_037573049.1;Name=WP_037573049.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424580.1;locus_tag=RM672_RS04760;product=cysteine desulfurase;protein_id=WP_037573049.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 260475 261782 . - . ID=gene-RM672_RS04765;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=RM672_RS04765;old_locus_tag=RM672_04765 NZ_JAVRJS010000002.1 Protein Homology CDS 260475 261782 . - 0 ID=cds-WP_037572367.1;Parent=gene-RM672_RS04765;Dbxref=GenBank:WP_037572367.1;Name=WP_037572367.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=RM672_RS04765;product=Fe-S cluster assembly protein SufD;protein_id=WP_037572367.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 261804 262574 . - . ID=gene-RM672_RS04770;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=RM672_RS04770;old_locus_tag=RM672_04770 NZ_JAVRJS010000002.1 Protein Homology CDS 261804 262574 . - 0 ID=cds-WP_037572369.1;Parent=gene-RM672_RS04770;Dbxref=GenBank:WP_037572369.1;Name=WP_037572369.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=RM672_RS04770;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_037572369.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 262878 263729 . + . ID=gene-RM672_RS04775;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=RM672_RS04775;old_locus_tag=RM672_04775 NZ_JAVRJS010000002.1 Protein Homology CDS 262878 263729 . + 0 ID=cds-WP_037572371.1;Parent=gene-RM672_RS04775;Dbxref=GenBank:WP_037572371.1;Name=WP_037572371.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424577.1;locus_tag=RM672_RS04775;product=polyprenyl-phosphate transporter PopT;protein_id=WP_037572371.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 264024 264854 . - . ID=gene-RM672_RS04780;Name=RM672_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04780;old_locus_tag=RM672_04780 NZ_JAVRJS010000002.1 Protein Homology CDS 264024 264854 . - 0 ID=cds-WP_037572373.1;Parent=gene-RM672_RS04780;Dbxref=GenBank:WP_037572373.1;Name=WP_037572373.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614450.1;locus_tag=RM672_RS04780;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_037572373.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 264879 265574 . - . ID=gene-RM672_RS04785;Name=RM672_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04785;old_locus_tag=RM672_04785 NZ_JAVRJS010000002.1 Protein Homology CDS 264879 265574 . - 0 ID=cds-WP_037572375.1;Parent=gene-RM672_RS04785;Dbxref=GenBank:WP_037572375.1;Name=WP_037572375.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=RM672_RS04785;product=methionine ABC transporter permease;protein_id=WP_037572375.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 265567 266595 . - . ID=gene-RM672_RS04790;Name=RM672_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04790;old_locus_tag=RM672_04790 NZ_JAVRJS010000002.1 Protein Homology CDS 265567 266595 . - 0 ID=cds-WP_037572377.1;Parent=gene-RM672_RS04790;Dbxref=GenBank:WP_037572377.1;Name=WP_037572377.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082631.1;locus_tag=RM672_RS04790;product=methionine ABC transporter ATP-binding protein;protein_id=WP_037572377.1;transl_table=11 NZ_JAVRJS010000002.1 cmsearch riboswitch 266688 266794 . - . ID=id-NZ_JAVRJS010000002.1:266688..266794;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000002.1 RefSeq gene 266834 267154 . - . ID=gene-RM672_RS04795;Name=RM672_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04795;old_locus_tag=RM672_04795 NZ_JAVRJS010000002.1 Protein Homology CDS 266834 267154 . - 0 ID=cds-WP_037572379.1;Parent=gene-RM672_RS04795;Dbxref=GenBank:WP_037572379.1;Name=WP_037572379.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=RM672_RS04795;product=thioredoxin family protein;protein_id=WP_037572379.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 267120 267515 . - . ID=gene-RM672_RS04800;Name=RM672_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04800;old_locus_tag=RM672_04800 NZ_JAVRJS010000002.1 Protein Homology CDS 267120 267515 . - 0 ID=cds-WP_037572380.1;Parent=gene-RM672_RS04800;Dbxref=GenBank:WP_037572380.1;Name=WP_037572380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=RM672_RS04800;product=toprim domain-containing protein;protein_id=WP_037572380.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 267598 267978 . - . ID=gene-RM672_RS04805;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=RM672_RS04805;old_locus_tag=RM672_04805 NZ_JAVRJS010000002.1 Protein Homology CDS 267598 267978 . - 0 ID=cds-WP_037572381.1;Parent=gene-RM672_RS04805;Dbxref=GenBank:WP_037572381.1;Name=WP_037572381.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=RM672_RS04805;product=glycine cleavage system protein GcvH;protein_id=WP_037572381.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 268049 268402 . - . ID=gene-RM672_RS04810;Name=RM672_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04810;old_locus_tag=RM672_04810 NZ_JAVRJS010000002.1 Protein Homology CDS 268049 268402 . - 0 ID=cds-WP_037572382.1;Parent=gene-RM672_RS04810;Dbxref=GenBank:WP_037572382.1;Name=WP_037572382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450858.1;locus_tag=RM672_RS04810;product=arsenate reductase family protein;protein_id=WP_037572382.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 268572 268892 . + . ID=gene-RM672_RS04815;Name=RM672_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04815;old_locus_tag=RM672_04815 NZ_JAVRJS010000002.1 Protein Homology CDS 268572 268892 . + 0 ID=cds-WP_037572383.1;Parent=gene-RM672_RS04815;Dbxref=GenBank:WP_037572383.1;Name=WP_037572383.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147954.1;locus_tag=RM672_RS04815;product=thioredoxin family protein;protein_id=WP_037572383.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 268979 269524 . - . ID=gene-RM672_RS04820;Name=RM672_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04820;old_locus_tag=RM672_04820 NZ_JAVRJS010000002.1 Protein Homology CDS 268979 269524 . - 0 ID=cds-WP_105985884.1;Parent=gene-RM672_RS04820;Dbxref=GenBank:WP_105985884.1;Name=WP_105985884.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424567.1;locus_tag=RM672_RS04820;product=nitroreductase family protein;protein_id=WP_105985884.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 269558 270301 . - . ID=gene-RM672_RS04825;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=RM672_RS04825;old_locus_tag=RM672_04825 NZ_JAVRJS010000002.1 Protein Homology CDS 269558 270301 . - 0 ID=cds-WP_103158887.1;Parent=gene-RM672_RS04825;Dbxref=GenBank:WP_103158887.1;Name=WP_103158887.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=RM672_RS04825;product=type I 3-dehydroquinate dehydratase;protein_id=WP_103158887.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 270428 270847 . + . ID=gene-RM672_RS04830;Name=RM672_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04830;old_locus_tag=RM672_04830 NZ_JAVRJS010000002.1 Protein Homology CDS 270428 270847 . + 0 ID=cds-WP_037572388.1;Parent=gene-RM672_RS04830;Dbxref=GenBank:WP_037572388.1;Name=WP_037572388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503427.1;locus_tag=RM672_RS04830;product=organic hydroperoxide resistance protein;protein_id=WP_037572388.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 271033 271536 . + . ID=gene-RM672_RS04835;Name=RM672_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04835;old_locus_tag=RM672_04835 NZ_JAVRJS010000002.1 Protein Homology CDS 271033 271536 . + 0 ID=cds-WP_037572390.1;Parent=gene-RM672_RS04835;Dbxref=GenBank:WP_037572390.1;Name=WP_037572390.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424562.1;locus_tag=RM672_RS04835;product=GNAT family N-acetyltransferase;protein_id=WP_037572390.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 271545 271916 . + . ID=gene-RM672_RS04840;Name=RM672_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04840;old_locus_tag=RM672_04840 NZ_JAVRJS010000002.1 Protein Homology CDS 271545 271916 . + 0 ID=cds-WP_107360756.1;Parent=gene-RM672_RS04840;Dbxref=GenBank:WP_107360756.1;Name=WP_107360756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=RM672_RS04840;product=DUF1722 domain-containing protein;protein_id=WP_107360756.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 272014 273486 . + . ID=gene-RM672_RS04845;Name=RM672_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04845;old_locus_tag=RM672_04845 NZ_JAVRJS010000002.1 Protein Homology CDS 272014 273486 . + 0 ID=cds-WP_119512982.1;Parent=gene-RM672_RS04845;Dbxref=GenBank:WP_119512982.1;Name=WP_119512982.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364574.1;locus_tag=RM672_RS04845;product=MFS transporter;protein_id=WP_119512982.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 273612 273827 . - . ID=gene-RM672_RS04850;Name=RM672_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04850;old_locus_tag=RM672_04850 NZ_JAVRJS010000002.1 Protein Homology CDS 273612 273827 . - 0 ID=cds-WP_037572397.1;Parent=gene-RM672_RS04850;Dbxref=GenBank:WP_037572397.1;Name=WP_037572397.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209103.1;locus_tag=RM672_RS04850;product=heavy-metal-associated domain-containing protein;protein_id=WP_037572397.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 273850 275760 . - . ID=gene-RM672_RS04855;Name=RM672_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04855;old_locus_tag=RM672_04855 NZ_JAVRJS010000002.1 Protein Homology CDS 273850 275760 . - 0 ID=cds-WP_107370361.1;Parent=gene-RM672_RS04855;Dbxref=GenBank:WP_107370361.1;Name=WP_107370361.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479531.1;locus_tag=RM672_RS04855;product=heavy metal translocating P-type ATPase;protein_id=WP_107370361.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 275836 276492 . - . ID=gene-RM672_RS04860;Name=RM672_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04860;old_locus_tag=RM672_04860 NZ_JAVRJS010000002.1 Protein Homology CDS 275836 276492 . - 0 ID=cds-WP_037572399.1;Parent=gene-RM672_RS04860;Dbxref=GenBank:WP_037572399.1;Name=WP_037572399.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656193.1;locus_tag=RM672_RS04860;product=Crp/Fnr family transcriptional regulator;protein_id=WP_037572399.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 276734 276916 . - . ID=gene-RM672_RS04865;Name=RM672_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04865;old_locus_tag=RM672_04865 NZ_JAVRJS010000002.1 Protein Homology CDS 276734 276916 . - 0 ID=cds-WP_103158936.1;Parent=gene-RM672_RS04865;Dbxref=GenBank:WP_103158936.1;Name=WP_103158936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303570.1;locus_tag=RM672_RS04865;product=CsbD family protein;protein_id=WP_103158936.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 277030 278220 . - . ID=gene-RM672_RS04870;Name=RM672_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04870;old_locus_tag=RM672_04870 NZ_JAVRJS010000002.1 Protein Homology CDS 277030 278220 . - 0 ID=cds-WP_311541322.1;Parent=gene-RM672_RS04870;Dbxref=GenBank:WP_311541322.1;Name=WP_311541322.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.7;locus_tag=RM672_RS04870;product=cation:proton antiporter;protein_id=WP_311541322.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 278483 278668 . + . ID=gene-RM672_RS04875;Name=RM672_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04875;old_locus_tag=RM672_04875 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 278483 278668 . + 0 ID=cds-WP_037572404.1;Parent=gene-RM672_RS04875;Dbxref=GenBank:WP_037572404.1;Name=WP_037572404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS04875;product=hypothetical protein;protein_id=WP_037572404.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 279030 279388 . - . ID=gene-RM672_RS04880;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=RM672_RS04880;old_locus_tag=RM672_04880 NZ_JAVRJS010000002.1 cmsearch tmRNA 279030 279388 . - . ID=rna-RM672_RS04880;Parent=gene-RM672_RS04880;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS04880;product=transfer-messenger RNA NZ_JAVRJS010000002.1 cmsearch exon 279030 279388 . - . ID=exon-RM672_RS04880-1;Parent=rna-RM672_RS04880;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS04880;product=transfer-messenger RNA NZ_JAVRJS010000002.1 RefSeq gene 279461 279925 . - . ID=gene-RM672_RS04885;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=RM672_RS04885;old_locus_tag=RM672_04885 NZ_JAVRJS010000002.1 Protein Homology CDS 279461 279925 . - 0 ID=cds-WP_037572408.1;Parent=gene-RM672_RS04885;Dbxref=GenBank:WP_037572408.1;Name=WP_037572408.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=RM672_RS04885;product=SsrA-binding protein SmpB;protein_id=WP_037572408.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 279942 282296 . - . ID=gene-RM672_RS04890;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=RM672_RS04890;old_locus_tag=RM672_04890 NZ_JAVRJS010000002.1 Protein Homology CDS 279942 282296 . - 0 ID=cds-WP_103158934.1;Parent=gene-RM672_RS04890;Dbxref=GenBank:WP_103158934.1;Name=WP_103158934.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=RM672_RS04890;product=ribonuclease R;protein_id=WP_103158934.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 282335 283075 . - . ID=gene-RM672_RS04895;Name=RM672_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04895;old_locus_tag=RM672_04895 NZ_JAVRJS010000002.1 Protein Homology CDS 282335 283075 . - 0 ID=cds-WP_037572421.1;Parent=gene-RM672_RS04895;Dbxref=GenBank:WP_037572421.1;Name=WP_037572421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=RM672_RS04895;product=alpha/beta hydrolase;protein_id=WP_037572421.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 283229 283462 . - . ID=gene-RM672_RS04900;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=RM672_RS04900;old_locus_tag=RM672_04900 NZ_JAVRJS010000002.1 Protein Homology CDS 283229 283462 . - 0 ID=cds-WP_037566707.1;Parent=gene-RM672_RS04900;Dbxref=GenBank:WP_037566707.1;Name=WP_037566707.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=RM672_RS04900;product=preprotein translocase subunit SecG;protein_id=WP_037566707.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 283532 284002 . - . ID=gene-RM672_RS04905;Name=RM672_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04905;old_locus_tag=RM672_04905 NZ_JAVRJS010000002.1 Protein Homology CDS 283532 284002 . - 0 ID=cds-WP_229717270.1;Parent=gene-RM672_RS04905;Dbxref=GenBank:WP_229717270.1;Name=WP_229717270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=RM672_RS04905;product=hypothetical protein;protein_id=WP_229717270.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 284155 285459 . - . ID=gene-RM672_RS04910;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=RM672_RS04910;old_locus_tag=RM672_04910 NZ_JAVRJS010000002.1 Protein Homology CDS 284155 285459 . - 0 ID=cds-WP_037572424.1;Parent=gene-RM672_RS04910;Dbxref=GenBank:WP_037572424.1;Name=WP_037572424.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=RM672_RS04910;product=surface-displayed alpha-enolase;protein_id=WP_037572424.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 285618 287138 . - . ID=gene-RM672_RS04915;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=RM672_RS04915;old_locus_tag=RM672_04915 NZ_JAVRJS010000002.1 Protein Homology CDS 285618 287138 . - 0 ID=cds-WP_037572425.1;Parent=gene-RM672_RS04915;Dbxref=GenBank:WP_037572425.1;Name=WP_037572425.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=RM672_RS04915;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_037572425.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 287140 287901 . - . ID=gene-RM672_RS04920;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=RM672_RS04920;old_locus_tag=RM672_04920 NZ_JAVRJS010000002.1 Protein Homology CDS 287140 287901 . - 0 ID=cds-WP_037572427.1;Parent=gene-RM672_RS04920;Dbxref=GenBank:WP_037572427.1;Name=WP_037572427.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=RM672_RS04920;product=triose-phosphate isomerase;protein_id=WP_037572427.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 287974 289164 . - . ID=gene-RM672_RS04925;Name=RM672_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04925;old_locus_tag=RM672_04925 NZ_JAVRJS010000002.1 Protein Homology CDS 287974 289164 . - 0 ID=cds-WP_037572429.1;Parent=gene-RM672_RS04925;Dbxref=GenBank:WP_037572429.1;Name=WP_037572429.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=RM672_RS04925;product=phosphoglycerate kinase;protein_id=WP_037572429.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 289337 290344 . - . ID=gene-RM672_RS04930;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=RM672_RS04930;old_locus_tag=RM672_04930 NZ_JAVRJS010000002.1 Protein Homology CDS 289337 290344 . - 0 ID=cds-WP_037572432.1;Parent=gene-RM672_RS04930;Dbxref=GenBank:WP_037572432.1;Name=WP_037572432.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=RM672_RS04930;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037572432.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 290476 291492 . - . ID=gene-RM672_RS04935;Name=RM672_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04935;old_locus_tag=RM672_04935 NZ_JAVRJS010000002.1 Protein Homology CDS 290476 291492 . - 0 ID=cds-WP_037572435.1;Parent=gene-RM672_RS04935;Dbxref=GenBank:WP_037572435.1;Name=WP_037572435.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424539.1;locus_tag=RM672_RS04935;product=sugar-binding transcriptional regulator;protein_id=WP_037572435.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 291784 292044 . + . ID=gene-RM672_RS04940;Name=RM672_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04940;old_locus_tag=RM672_04940 NZ_JAVRJS010000002.1 Protein Homology CDS 291784 292044 . + 0 ID=cds-WP_037572438.1;Parent=gene-RM672_RS04940;Dbxref=GenBank:WP_037572438.1;Name=WP_037572438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424538.1;locus_tag=RM672_RS04940;product=hypothetical protein;protein_id=WP_037572438.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 292123 292827 . - . ID=gene-RM672_RS04945;Name=RM672_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04945;old_locus_tag=RM672_04945 NZ_JAVRJS010000002.1 Protein Homology CDS 292123 292827 . - 0 ID=cds-WP_037572441.1;Parent=gene-RM672_RS04945;Dbxref=GenBank:WP_037572441.1;Name=WP_037572441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165687.1;locus_tag=RM672_RS04945;product=DUF4887 domain-containing protein;protein_id=WP_037572441.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 293403 294305 . + . ID=gene-RM672_RS04950;Name=RM672_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04950;old_locus_tag=RM672_04950 NZ_JAVRJS010000002.1 Protein Homology CDS 293403 294305 . + 0 ID=cds-WP_037572444.1;Parent=gene-RM672_RS04950;Dbxref=GenBank:WP_037572444.1;Name=WP_037572444.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165689.1;locus_tag=RM672_RS04950;product=TIGR01777 family oxidoreductase;protein_id=WP_037572444.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 294450 294890 . - . ID=gene-RM672_RS04955;Name=RM672_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04955;old_locus_tag=RM672_04955 NZ_JAVRJS010000002.1 Protein Homology CDS 294450 294890 . - 0 ID=cds-WP_051604937.1;Parent=gene-RM672_RS04955;Dbxref=GenBank:WP_051604937.1;Name=WP_051604937.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363264.1;locus_tag=RM672_RS04955;product=GNAT family N-acetyltransferase;protein_id=WP_051604937.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 295093 296598 . + . ID=gene-RM672_RS04960;Name=RM672_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04960;old_locus_tag=RM672_04960 NZ_JAVRJS010000002.1 Protein Homology CDS 295093 296598 . + 0 ID=cds-WP_103158929.1;Parent=gene-RM672_RS04960;Dbxref=GenBank:WP_103158929.1;Name=WP_103158929.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912174.1;locus_tag=RM672_RS04960;product=M4 family metallopeptidase;protein_id=WP_103158929.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 296766 297548 . - . ID=gene-RM672_RS04965;Name=RM672_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04965;old_locus_tag=RM672_04965 NZ_JAVRJS010000002.1 Protein Homology CDS 296766 297548 . - 0 ID=cds-WP_037572449.1;Parent=gene-RM672_RS04965;Dbxref=GenBank:WP_037572449.1;Name=WP_037572449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664081.1;locus_tag=RM672_RS04965;product=VOC family protein;protein_id=WP_037572449.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 297721 297924 . + . ID=gene-RM672_RS04970;Name=RM672_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04970;old_locus_tag=RM672_04970 NZ_JAVRJS010000002.1 Protein Homology CDS 297721 297924 . + 0 ID=cds-WP_037572452.1;Parent=gene-RM672_RS04970;Dbxref=GenBank:WP_037572452.1;Name=WP_037572452.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=RM672_RS04970;product=TM2 domain-containing protein;protein_id=WP_037572452.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 297981 298181 . - . ID=gene-RM672_RS04975;Name=RM672_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04975;old_locus_tag=RM672_04975 NZ_JAVRJS010000002.1 Protein Homology CDS 297981 298181 . - 0 ID=cds-WP_037572454.1;Parent=gene-RM672_RS04975;Dbxref=GenBank:WP_037572454.1;Name=WP_037572454.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=RM672_RS04975;product=cold shock domain-containing protein;protein_id=WP_037572454.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 298444 299205 . - . ID=gene-RM672_RS04980;Name=RM672_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS04980;old_locus_tag=RM672_04980 NZ_JAVRJS010000002.1 Protein Homology CDS 298444 299205 . - 0 ID=cds-WP_037572456.1;Parent=gene-RM672_RS04980;Dbxref=GenBank:WP_037572456.1;Name=WP_037572456.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479341.1;locus_tag=RM672_RS04980;product=peptidoglycan recognition protein family protein;protein_id=WP_037572456.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 299764 300345 . + . ID=gene-RM672_RS04985;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=RM672_RS04985;old_locus_tag=RM672_04985 NZ_JAVRJS010000002.1 Protein Homology CDS 299764 300345 . + 0 ID=cds-WP_037572459.1;Parent=gene-RM672_RS04985;Dbxref=GenBank:WP_037572459.1;Name=WP_037572459.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424534.1;locus_tag=RM672_RS04985;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_037572459.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 300384 301328 . - . ID=gene-RM672_RS04990;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=RM672_RS04990;old_locus_tag=RM672_04990 NZ_JAVRJS010000002.1 Protein Homology CDS 300384 301328 . - 0 ID=cds-WP_037572462.1;Parent=gene-RM672_RS04990;Dbxref=GenBank:WP_037572462.1;Name=WP_037572462.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=RM672_RS04990;product=DNA-binding protein WhiA;protein_id=WP_037572462.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 301387 302385 . - . ID=gene-RM672_RS04995;Name=mgfK;gbkey=Gene;gene=mgfK;gene_biotype=protein_coding;gene_synonym=yvcK;locus_tag=RM672_RS04995;old_locus_tag=RM672_04995 NZ_JAVRJS010000002.1 Protein Homology CDS 301387 302385 . - 0 ID=cds-WP_037572464.1;Parent=gene-RM672_RS04995;Dbxref=GenBank:WP_037572464.1;Name=WP_037572464.1;Ontology_term=GO:0008360,GO:0043743;gbkey=CDS;gene=mgfK;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=RM672_RS04995;product=gluconeogenesis morphogenetic factor MgfK;protein_id=WP_037572464.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 302372 303295 . - . ID=gene-RM672_RS05000;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=RM672_RS05000;old_locus_tag=RM672_05000 NZ_JAVRJS010000002.1 Protein Homology CDS 302372 303295 . - 0 ID=cds-WP_037572466.1;Parent=gene-RM672_RS05000;Dbxref=GenBank:WP_037572466.1;Name=WP_037572466.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303622.1;locus_tag=RM672_RS05000;product=RNase adapter RapZ;protein_id=WP_037572466.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 303459 304403 . - . ID=gene-RM672_RS05005;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=RM672_RS05005;old_locus_tag=RM672_05005 NZ_JAVRJS010000002.1 Protein Homology CDS 303459 304403 . - 0 ID=cds-WP_037572468.1;Parent=gene-RM672_RS05005;Dbxref=GenBank:WP_037572468.1;Name=WP_037572468.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469483.1;locus_tag=RM672_RS05005;product=thioredoxin-disulfide reductase;protein_id=WP_037572468.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 304467 305903 . - . ID=gene-RM672_RS05010;Name=RM672_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05010;old_locus_tag=RM672_05010 NZ_JAVRJS010000002.1 Protein Homology CDS 304467 305903 . - 0 ID=cds-WP_037572471.1;Parent=gene-RM672_RS05010;Dbxref=GenBank:WP_037572471.1;Name=WP_037572471.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728761.1;locus_tag=RM672_RS05010;product=tetratricopeptide repeat protein;protein_id=WP_037572471.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 305920 306405 . - . ID=gene-RM672_RS05015;Name=RM672_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05015;old_locus_tag=RM672_05015 NZ_JAVRJS010000002.1 Protein Homology CDS 305920 306405 . - 0 ID=cds-WP_037572473.1;Parent=gene-RM672_RS05015;Dbxref=GenBank:WP_037572473.1;Name=WP_037572473.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424528.1;locus_tag=RM672_RS05015;product=acyltransferase;protein_id=WP_037572473.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 306389 307240 . - . ID=gene-RM672_RS05020;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=RM672_RS05020;old_locus_tag=RM672_05020 NZ_JAVRJS010000002.1 Protein Homology CDS 306389 307240 . - 0 ID=cds-WP_037572475.1;Parent=gene-RM672_RS05020;Dbxref=GenBank:WP_037572475.1;Name=WP_037572475.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383062.1;locus_tag=RM672_RS05020;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_037572475.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 307243 308178 . - . ID=gene-RM672_RS05025;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=RM672_RS05025;old_locus_tag=RM672_05025 NZ_JAVRJS010000002.1 Protein Homology CDS 307243 308178 . - 0 ID=cds-WP_037572477.1;Parent=gene-RM672_RS05025;Dbxref=GenBank:WP_037572477.1;Name=WP_037572477.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499338.1;locus_tag=RM672_RS05025;product=HPr(Ser) kinase/phosphatase;protein_id=WP_037572477.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 308352 308735 . - . ID=gene-RM672_RS05030;Name=RM672_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05030;old_locus_tag=RM672_05030 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 308352 308735 . - 0 ID=cds-WP_037572478.1;Parent=gene-RM672_RS05030;Dbxref=GenBank:WP_037572478.1;Name=WP_037572478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS05030;product=hypothetical protein;protein_id=WP_037572478.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 308739 311582 . - . ID=gene-RM672_RS05035;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=RM672_RS05035;old_locus_tag=RM672_05035 NZ_JAVRJS010000002.1 Protein Homology CDS 308739 311582 . - 0 ID=cds-WP_037572481.1;Parent=gene-RM672_RS05035;Dbxref=GenBank:WP_037572481.1;Name=WP_037572481.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499337.1;locus_tag=RM672_RS05035;product=excinuclease ABC subunit UvrA;protein_id=WP_037572481.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 311588 313570 . - . ID=gene-RM672_RS05040;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=RM672_RS05040;old_locus_tag=RM672_05040 NZ_JAVRJS010000002.1 Protein Homology CDS 311588 313570 . - 0 ID=cds-WP_037572484.1;Parent=gene-RM672_RS05040;Dbxref=GenBank:WP_037572484.1;Name=WP_037572484.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=RM672_RS05040;product=excinuclease ABC subunit UvrB;protein_id=WP_037572484.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 313725 313961 . - . ID=gene-RM672_RS05045;Name=RM672_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05045;old_locus_tag=RM672_05045 NZ_JAVRJS010000002.1 Protein Homology CDS 313725 313961 . - 0 ID=cds-WP_037572486.1;Parent=gene-RM672_RS05045;Dbxref=GenBank:WP_037572486.1;Name=WP_037572486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=RM672_RS05045;product=CsbA family protein;protein_id=WP_037572486.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 313967 314608 . - . ID=gene-RM672_RS05050;Name=RM672_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05050;old_locus_tag=RM672_05050 NZ_JAVRJS010000002.1 Protein Homology CDS 313967 314608 . - 0 ID=cds-WP_037572489.1;Parent=gene-RM672_RS05050;Dbxref=GenBank:WP_037572489.1;Name=WP_037572489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=RM672_RS05050;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_037572489.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 314737 315600 . - . ID=gene-RM672_RS05055;Name=RM672_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05055;old_locus_tag=RM672_05055 NZ_JAVRJS010000002.1 Protein Homology CDS 314737 315600 . - 0 ID=cds-WP_051604938.1;Parent=gene-RM672_RS05055;Dbxref=GenBank:WP_051604938.1;Name=WP_051604938.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF017102.7;locus_tag=RM672_RS05055;product=CHAP domain-containing protein;protein_id=WP_051604938.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 315687 316791 . - . ID=gene-RM672_RS05060;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=RM672_RS05060;old_locus_tag=RM672_05060 NZ_JAVRJS010000002.1 Protein Homology CDS 316720 316791 . - 0 ID=cds-WP_103158921.1;Parent=gene-RM672_RS05060;Dbxref=GenBank:WP_103158921.1;Name=WP_103158921.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM672_RS05060;product=peptide chain release factor 2;protein_id=WP_103158921.1;transl_table=11 NZ_JAVRJS010000002.1 Protein Homology CDS 315687 316718 . - 0 ID=cds-WP_103158921.1;Parent=gene-RM672_RS05060;Dbxref=GenBank:WP_103158921.1;Name=WP_103158921.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM672_RS05060;product=peptide chain release factor 2;protein_id=WP_103158921.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 316815 319343 . - . ID=gene-RM672_RS05065;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=RM672_RS05065;old_locus_tag=RM672_05065 NZ_JAVRJS010000002.1 Protein Homology CDS 316815 319343 . - 0 ID=cds-WP_037572491.1;Parent=gene-RM672_RS05065;Dbxref=GenBank:WP_037572491.1;Name=WP_037572491.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499326.1;locus_tag=RM672_RS05065;product=preprotein translocase subunit SecA;protein_id=WP_037572491.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 319564 320133 . - . ID=gene-RM672_RS05070;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=RM672_RS05070;old_locus_tag=RM672_05070 NZ_JAVRJS010000002.1 Protein Homology CDS 319564 320133 . - 0 ID=cds-WP_037572494.1;Parent=gene-RM672_RS05070;Dbxref=GenBank:WP_037572494.1;Name=WP_037572494.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464843.1;locus_tag=RM672_RS05070;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_037572494.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 320198 320758 . - . ID=gene-RM672_RS05075;Name=RM672_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05075;old_locus_tag=RM672_05075 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 320198 320758 . - 0 ID=cds-WP_233650038.1;Parent=gene-RM672_RS05075;Dbxref=GenBank:WP_233650038.1;Name=WP_233650038.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS05075;product=ComF family protein;protein_id=WP_233650038.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 320854 322143 . - . ID=gene-RM672_RS05080;Name=RM672_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05080;old_locus_tag=RM672_05080 NZ_JAVRJS010000002.1 Protein Homology CDS 320854 322143 . - 0 ID=cds-WP_105962959.1;Parent=gene-RM672_RS05080;Dbxref=GenBank:WP_105962959.1;Name=WP_105962959.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424515.1;locus_tag=RM672_RS05080;product=DEAD/DEAH box helicase family protein;protein_id=WP_105962959.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 322294 323166 . - . ID=gene-RM672_RS05085;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=RM672_RS05085;old_locus_tag=RM672_05085 NZ_JAVRJS010000002.1 Protein Homology CDS 322294 323166 . - 0 ID=cds-WP_037572500.1;Parent=gene-RM672_RS05085;Dbxref=GenBank:WP_037572500.1;Name=WP_037572500.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=RM672_RS05085;product=fatty acid kinase binding subunit FakB1;protein_id=WP_037572500.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 323380 324018 . + . ID=gene-RM672_RS05090;Name=RM672_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05090;old_locus_tag=RM672_05090 NZ_JAVRJS010000002.1 Protein Homology CDS 323380 324018 . + 0 ID=cds-WP_037572503.1;Parent=gene-RM672_RS05090;Dbxref=GenBank:WP_037572503.1;Name=WP_037572503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633769.1;locus_tag=RM672_RS05090;product=YigZ family protein;protein_id=WP_037572503.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 324067 325113 . - . ID=gene-RM672_RS05095;Name=RM672_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05095;old_locus_tag=RM672_05095 NZ_JAVRJS010000002.1 Protein Homology CDS 324067 325113 . - 0 ID=cds-WP_037572505.1;Parent=gene-RM672_RS05095;Dbxref=GenBank:WP_037572505.1;Name=WP_037572505.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483912.1;locus_tag=RM672_RS05095;product=glycosyltransferase family 4 protein;protein_id=WP_037572505.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 325335 326405 . + . ID=gene-RM672_RS05100;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=RM672_RS05100;old_locus_tag=RM672_05100 NZ_JAVRJS010000002.1 Protein Homology CDS 325335 326405 . + 0 ID=cds-WP_105962958.1;Parent=gene-RM672_RS05100;Dbxref=GenBank:WP_105962958.1;Name=WP_105962958.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424511.1;locus_tag=RM672_RS05100;product=GGDEF domain-containing protein GdpS;protein_id=WP_105962958.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 326712 327473 . + . ID=gene-RM672_RS05105;Name=RM672_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05105;old_locus_tag=RM672_05105 NZ_JAVRJS010000002.1 Protein Homology CDS 326712 327473 . + 0 ID=cds-WP_311542469.1;Parent=gene-RM672_RS05105;Dbxref=GenBank:WP_311542469.1;Name=WP_311542469.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=RM672_RS05105;product=threonine/serine exporter family protein;protein_id=WP_311542469.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 327488 327991 . + . ID=gene-RM672_RS05110;Name=RM672_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05110;old_locus_tag=RM672_05110 NZ_JAVRJS010000002.1 Protein Homology CDS 327488 327991 . + 0 ID=cds-WP_103158917.1;Parent=gene-RM672_RS05110;Dbxref=GenBank:WP_103158917.1;Name=WP_103158917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=RM672_RS05110;product=threonine/serine exporter family protein;protein_id=WP_103158917.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 328004 329230 . + . ID=gene-RM672_RS05115;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=RM672_RS05115;old_locus_tag=RM672_05115 NZ_JAVRJS010000002.1 Protein Homology CDS 328004 329230 . + 0 ID=cds-WP_311540624.1;Parent=gene-RM672_RS05115;Dbxref=GenBank:WP_311540624.1;Name=WP_311540624.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898336.1;locus_tag=RM672_RS05115;product=peptidase T;protein_id=WP_311540624.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 329281 330393 . - . ID=gene-RM672_RS05120;Name=RM672_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05120;old_locus_tag=RM672_05120 NZ_JAVRJS010000002.1 Protein Homology CDS 329281 330393 . - 0 ID=cds-WP_311542470.1;Parent=gene-RM672_RS05120;Dbxref=GenBank:WP_311542470.1;Name=WP_311542470.1;Ontology_term=GO:0008152,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476428.1;locus_tag=RM672_RS05120;product=glycerate kinase;protein_id=WP_311542470.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 330513 330830 . - . ID=gene-RM672_RS05125;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=RM672_RS05125;old_locus_tag=RM672_05125 NZ_JAVRJS010000002.1 Protein Homology CDS 330513 330830 . - 0 ID=cds-WP_037572519.1;Parent=gene-RM672_RS05125;Dbxref=GenBank:WP_037572519.1;Name=WP_037572519.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=RM672_RS05125;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_037572519.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 330975 331874 . - . ID=gene-RM672_RS05130;Name=RM672_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05130;old_locus_tag=RM672_05130 NZ_JAVRJS010000002.1 Protein Homology CDS 330975 331874 . - 0 ID=cds-WP_311540626.1;Parent=gene-RM672_RS05130;Dbxref=GenBank:WP_311540626.1;Name=WP_311540626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033194.1;locus_tag=RM672_RS05130;product=EMYY motif lipoprotein;protein_id=WP_311540626.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 331974 332492 . + . ID=gene-RM672_RS05135;Name=RM672_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05135;old_locus_tag=RM672_05135 NZ_JAVRJS010000002.1 Protein Homology CDS 331974 332492 . + 0 ID=cds-WP_037572525.1;Parent=gene-RM672_RS05135;Dbxref=GenBank:WP_037572525.1;Name=WP_037572525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383087.1;locus_tag=RM672_RS05135;product=GrpB family protein;protein_id=WP_037572525.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 332565 333491 . + . ID=gene-RM672_RS05140;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=RM672_RS05140;old_locus_tag=RM672_05140 NZ_JAVRJS010000002.1 Protein Homology CDS 332565 333491 . + 0 ID=cds-WP_165806198.1;Parent=gene-RM672_RS05140;Dbxref=GenBank:WP_165806198.1;Name=WP_165806198.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471788.1;locus_tag=RM672_RS05140;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_165806198.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 333507 333821 . + . ID=gene-RM672_RS05145;Name=RM672_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05145;old_locus_tag=RM672_05145 NZ_JAVRJS010000002.1 Protein Homology CDS 333507 333821 . + 0 ID=cds-WP_037572530.1;Parent=gene-RM672_RS05145;Dbxref=GenBank:WP_037572530.1;Name=WP_037572530.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484624.1;locus_tag=RM672_RS05145;product=CHY zinc finger protein;protein_id=WP_037572530.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 334379 335350 . - . ID=gene-RM672_RS05150;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=RM672_RS05150;old_locus_tag=RM672_05150 NZ_JAVRJS010000002.1 Protein Homology CDS 334379 335350 . - 0 ID=cds-WP_037572532.1;Parent=gene-RM672_RS05150;Dbxref=GenBank:WP_037572532.1;Name=WP_037572532.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499303.1;locus_tag=RM672_RS05150;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_037572532.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 335598 337703 . - . ID=gene-RM672_RS05155;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=RM672_RS05155;old_locus_tag=RM672_05155 NZ_JAVRJS010000002.1 Protein Homology CDS 335598 337703 . - 0 ID=cds-WP_105962954.1;Parent=gene-RM672_RS05155;Dbxref=GenBank:WP_105962954.1;Name=WP_105962954.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=RM672_RS05155;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_105962954.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 337675 338064 . - . ID=gene-RM672_RS05160;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=RM672_RS05160;old_locus_tag=RM672_05160 NZ_JAVRJS010000002.1 Protein Homology CDS 337675 338064 . - 0 ID=cds-WP_037572538.1;Parent=gene-RM672_RS05160;Dbxref=GenBank:WP_037572538.1;Name=WP_037572538.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=RM672_RS05160;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_037572538.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 338747 339619 . + . ID=gene-RM672_RS05165;Name=RM672_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05165;old_locus_tag=RM672_05165 NZ_JAVRJS010000002.1 Protein Homology CDS 338747 339619 . + 0 ID=cds-WP_037572541.1;Parent=gene-RM672_RS05165;Dbxref=GenBank:WP_037572541.1;Name=WP_037572541.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276426.1;locus_tag=RM672_RS05165;product=DMT family transporter;protein_id=WP_037572541.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 339642 340142 . + . ID=gene-RM672_RS05170;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=RM672_RS05170;old_locus_tag=RM672_05170 NZ_JAVRJS010000002.1 Protein Homology CDS 339642 340142 . + 0 ID=cds-WP_037572545.1;Parent=gene-RM672_RS05170;Dbxref=GenBank:WP_037572545.1;Name=WP_037572545.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479355.1;locus_tag=RM672_RS05170;product=preQ(1) synthase;protein_id=WP_037572545.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 340319 341830 . + . ID=gene-RM672_RS05175;Name=RM672_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05175;old_locus_tag=RM672_05175 NZ_JAVRJS010000002.1 Protein Homology CDS 340319 341830 . + 0 ID=cds-WP_105962953.1;Parent=gene-RM672_RS05175;Dbxref=GenBank:WP_105962953.1;Name=WP_105962953.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=RM672_RS05175;product=peptide MFS transporter;protein_id=WP_105962953.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 342069 342995 . + . ID=gene-RM672_RS05180;Name=RM672_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05180;old_locus_tag=RM672_05180 NZ_JAVRJS010000002.1 Protein Homology CDS 342069 342995 . + 0 ID=cds-WP_037572549.1;Parent=gene-RM672_RS05180;Dbxref=GenBank:WP_037572549.1;Name=WP_037572549.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=RM672_RS05180;product=diacylglycerol/lipid kinase family protein;protein_id=WP_037572549.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq pseudogene 343057 343166 . - . ID=gene-RM672_RS11415;Name=RM672_RS11415;end_range=343166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11415;partial=true;pseudo=true NZ_JAVRJS010000002.1 Protein Homology CDS 343057 343166 . - 0 ID=cds-RM672_RS11415;Parent=gene-RM672_RS11415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=343166,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=RM672_RS11415;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 343952 344479 . - . ID=gene-RM672_RS05190;Name=RM672_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05190;old_locus_tag=RM672_05190 NZ_JAVRJS010000002.1 Protein Homology CDS 343952 344479 . - 0 ID=cds-WP_037572553.1;Parent=gene-RM672_RS05190;Dbxref=GenBank:WP_037572553.1;Name=WP_037572553.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424492.1;locus_tag=RM672_RS05190;product=5' nucleotidase%2C NT5C type;protein_id=WP_037572553.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 344550 345599 . - . ID=gene-RM672_RS05195;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=RM672_RS05195;old_locus_tag=RM672_05195 NZ_JAVRJS010000002.1 Protein Homology CDS 344550 345599 . - 0 ID=cds-WP_037572555.1;Parent=gene-RM672_RS05195;Dbxref=GenBank:WP_037572555.1;Name=WP_037572555.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=RM672_RS05195;product=histidinol-phosphate transaminase;protein_id=WP_037572555.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 345782 347296 . - . ID=gene-RM672_RS05200;Name=RM672_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05200;old_locus_tag=RM672_05200 NZ_JAVRJS010000002.1 Protein Homology CDS 345782 347296 . - 0 ID=cds-WP_103159359.1;Parent=gene-RM672_RS05200;Dbxref=GenBank:WP_103159359.1;Name=WP_103159359.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441471.1;locus_tag=RM672_RS05200;product=ABC transporter permease/substrate-binding protein;protein_id=WP_103159359.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 347293 348246 . - . ID=gene-RM672_RS05205;Name=RM672_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05205;old_locus_tag=RM672_05205 NZ_JAVRJS010000002.1 Protein Homology CDS 347293 348246 . - 0 ID=cds-WP_037572561.1;Parent=gene-RM672_RS05205;Dbxref=GenBank:WP_037572561.1;Name=WP_037572561.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424489.1;locus_tag=RM672_RS05205;product=ABC transporter ATP-binding protein;protein_id=WP_037572561.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 348469 350247 . - . ID=gene-RM672_RS05210;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=RM672_RS05210;old_locus_tag=RM672_05210 NZ_JAVRJS010000002.1 Protein Homology CDS 348469 350247 . - 0 ID=cds-WP_037572564.1;Parent=gene-RM672_RS05210;Dbxref=GenBank:WP_037572564.1;Name=WP_037572564.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=RM672_RS05210;product=DNA helicase RecQ;protein_id=WP_037572564.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 350258 352135 . - . ID=gene-RM672_RS05215;Name=RM672_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05215;old_locus_tag=RM672_05215 NZ_JAVRJS010000002.1 Protein Homology CDS 350258 352135 . - 0 ID=cds-WP_037572566.1;Parent=gene-RM672_RS05215;Dbxref=GenBank:WP_037572566.1;Name=WP_037572566.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=RM672_RS05215;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_037572566.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 352248 353063 . + . ID=gene-RM672_RS05220;Name=RM672_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05220;old_locus_tag=RM672_05220 NZ_JAVRJS010000002.1 Protein Homology CDS 352248 353063 . + 0 ID=cds-WP_037572569.1;Parent=gene-RM672_RS05220;Dbxref=GenBank:WP_037572569.1;Name=WP_037572569.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276437.1;locus_tag=RM672_RS05220;product=ZIP family metal transporter;protein_id=WP_037572569.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 353218 355155 . - . ID=gene-RM672_RS05225;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=RM672_RS05225;old_locus_tag=RM672_05225 NZ_JAVRJS010000002.1 Protein Homology CDS 353218 355155 . - 0 ID=cds-WP_037572572.1;Parent=gene-RM672_RS05225;Dbxref=GenBank:WP_037572572.1;Name=WP_037572572.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166148.1;locus_tag=RM672_RS05225;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_037572572.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 355674 356678 . - . ID=gene-RM672_RS05230;Name=RM672_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05230;old_locus_tag=RM672_05230 NZ_JAVRJS010000002.1 Protein Homology CDS 355674 356678 . - 0 ID=cds-WP_037572575.1;Parent=gene-RM672_RS05230;Dbxref=GenBank:WP_037572575.1;Name=WP_037572575.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=RM672_RS05230;product=5-oxoprolinase subunit C family protein;protein_id=WP_037572575.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 356675 357358 . - . ID=gene-RM672_RS05235;Name=RM672_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05235;old_locus_tag=RM672_05235 NZ_JAVRJS010000002.1 Protein Homology CDS 356675 357358 . - 0 ID=cds-WP_037572578.1;Parent=gene-RM672_RS05235;Dbxref=GenBank:WP_037572578.1;Name=WP_037572578.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452712.1;locus_tag=RM672_RS05235;product=5-oxoprolinase subunit B family protein;protein_id=WP_037572578.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 357591 358199 . - . ID=gene-RM672_RS05240;Name=RM672_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05240;old_locus_tag=RM672_05240 NZ_JAVRJS010000002.1 Protein Homology CDS 357591 358199 . - 0 ID=cds-WP_037572584.1;Parent=gene-RM672_RS05240;Dbxref=GenBank:WP_037572584.1;Name=WP_037572584.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013247.7;locus_tag=RM672_RS05240;product=aminotransferase class IV;protein_id=WP_037572584.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 358203 359339 . - . ID=gene-RM672_RS05245;Name=RM672_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05245;old_locus_tag=RM672_05245 NZ_JAVRJS010000002.1 Protein Homology CDS 358203 359339 . - 0 ID=cds-WP_037572587.1;Parent=gene-RM672_RS05245;Dbxref=GenBank:WP_037572587.1;Name=WP_037572587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=RM672_RS05245;product=anthranilate synthase component I family protein;protein_id=WP_037572587.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 359323 359916 . - . ID=gene-RM672_RS05250;Name=RM672_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05250;old_locus_tag=RM672_05250 NZ_JAVRJS010000002.1 Protein Homology CDS 359323 359916 . - 0 ID=cds-WP_037572590.1;Parent=gene-RM672_RS05250;Dbxref=GenBank:WP_037572590.1;Name=WP_037572590.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=RM672_RS05250;product=anthranilate synthase component II;protein_id=WP_037572590.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 360248 360919 . + . ID=gene-RM672_RS05255;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=RM672_RS05255;old_locus_tag=RM672_05255 NZ_JAVRJS010000002.1 Protein Homology CDS 360248 360919 . + 0 ID=cds-WP_037572593.1;Parent=gene-RM672_RS05255;Dbxref=GenBank:WP_037572593.1;Name=WP_037572593.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424465.1;locus_tag=RM672_RS05255;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_037572593.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 360916 361347 . + . ID=gene-RM672_RS05260;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=RM672_RS05260;old_locus_tag=RM672_05260 NZ_JAVRJS010000002.1 Protein Homology CDS 360916 361347 . + 0 ID=cds-WP_037572596.1;Parent=gene-RM672_RS05260;Dbxref=GenBank:WP_037572596.1;Name=WP_037572596.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=RM672_RS05260;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_037572596.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 361340 362053 . + . ID=gene-RM672_RS05265;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=RM672_RS05265;old_locus_tag=RM672_05265 NZ_JAVRJS010000002.1 Protein Homology CDS 361340 362053 . + 0 ID=cds-WP_311541325.1;Parent=gene-RM672_RS05265;Dbxref=GenBank:WP_311541325.1;Name=WP_311541325.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=RM672_RS05265;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_311541325.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 362155 362742 . + . ID=gene-RM672_RS05270;Name=RM672_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05270;old_locus_tag=RM672_05270 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 362155 362742 . + 0 ID=cds-WP_037572602.1;Parent=gene-RM672_RS05270;Dbxref=GenBank:WP_037572602.1;Name=WP_037572602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS05270;product=hypothetical protein;protein_id=WP_037572602.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 362819 363076 . + . ID=gene-RM672_RS05275;Name=RM672_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05275;old_locus_tag=RM672_05275 NZ_JAVRJS010000002.1 Protein Homology CDS 362819 363076 . + 0 ID=cds-WP_037572603.1;Parent=gene-RM672_RS05275;Dbxref=GenBank:WP_037572603.1;Name=WP_037572603.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481501.1;locus_tag=RM672_RS05275;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_037572603.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 363884 364861 . - . ID=gene-RM672_RS05280;Name=RM672_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05280;old_locus_tag=RM672_05280 NZ_JAVRJS010000002.1 Protein Homology CDS 363884 364861 . - 0 ID=cds-WP_037572604.1;Parent=gene-RM672_RS05280;Dbxref=GenBank:WP_037572604.1;Name=WP_037572604.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637336.1;locus_tag=RM672_RS05280;product=glycosyltransferase family 2 protein;protein_id=WP_037572604.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 365188 366552 . - . ID=gene-RM672_RS05285;Name=RM672_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05285;old_locus_tag=RM672_05285 NZ_JAVRJS010000002.1 Protein Homology CDS 365188 366552 . - 0 ID=cds-WP_037572605.1;Parent=gene-RM672_RS05285;Dbxref=GenBank:WP_037572605.1;Name=WP_037572605.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481493.1;locus_tag=RM672_RS05285;product=hemolysin family protein;protein_id=WP_037572605.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 367024 368943 . - . ID=gene-RM672_RS05290;Name=RM672_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05290;old_locus_tag=RM672_05290 NZ_JAVRJS010000002.1 Protein Homology CDS 367024 368943 . - 0 ID=cds-WP_037572606.1;Parent=gene-RM672_RS05290;Dbxref=GenBank:WP_037572606.1;Name=WP_037572606.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=RM672_RS05290;product=PTS fructose transporter subunit IIABC;protein_id=WP_037572606.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 368945 369868 . - . ID=gene-RM672_RS05295;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=RM672_RS05295;old_locus_tag=RM672_05295 NZ_JAVRJS010000002.1 Protein Homology CDS 368945 369868 . - 0 ID=cds-WP_037572607.1;Parent=gene-RM672_RS05295;Dbxref=GenBank:WP_037572607.1;Name=WP_037572607.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=RM672_RS05295;product=1-phosphofructokinase;protein_id=WP_037572607.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 369865 370620 . - . ID=gene-RM672_RS05300;Name=RM672_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05300;old_locus_tag=RM672_05300 NZ_JAVRJS010000002.1 Protein Homology CDS 369865 370620 . - 0 ID=cds-WP_037572608.1;Parent=gene-RM672_RS05300;Dbxref=GenBank:WP_037572608.1;Name=WP_037572608.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424455.1;locus_tag=RM672_RS05300;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037572608.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 370773 371249 . - . ID=gene-RM672_RS05305;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=RM672_RS05305;old_locus_tag=RM672_05305 NZ_JAVRJS010000002.1 Protein Homology CDS 370773 371249 . - 0 ID=cds-WP_105996683.1;Parent=gene-RM672_RS05305;Dbxref=GenBank:WP_105996683.1;Name=WP_105996683.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459774.1;locus_tag=RM672_RS05305;product=Cys-tRNA(Pro) deacylase;protein_id=WP_105996683.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 371268 373589 . - . ID=gene-RM672_RS05310;Name=RM672_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05310;old_locus_tag=RM672_05310 NZ_JAVRJS010000002.1 Protein Homology CDS 371268 373589 . - 0 ID=cds-WP_311541327.1;Parent=gene-RM672_RS05310;Dbxref=GenBank:WP_311541327.1;Name=WP_311541327.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=RM672_RS05310;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_311541327.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 373658 374818 . - . ID=gene-RM672_RS05315;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=RM672_RS05315;old_locus_tag=RM672_05315 NZ_JAVRJS010000002.1 Protein Homology CDS 373658 374818 . - 0 ID=cds-WP_037572613.1;Parent=gene-RM672_RS05315;Dbxref=GenBank:WP_037572613.1;Name=WP_037572613.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=RM672_RS05315;product=multidrug efflux MFS transporter NorA;protein_id=WP_037572613.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 375110 375727 . + . ID=gene-RM672_RS05320;Name=RM672_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05320;old_locus_tag=RM672_05320 NZ_JAVRJS010000002.1 Protein Homology CDS 375110 375727 . + 0 ID=cds-WP_037572616.1;Parent=gene-RM672_RS05320;Dbxref=GenBank:WP_037572616.1;Name=WP_037572616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=RM672_RS05320;product=DUF1361 domain-containing protein;protein_id=WP_037572616.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 376014 376730 . + . ID=gene-RM672_RS05330;Name=RM672_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05330;old_locus_tag=RM672_05330 NZ_JAVRJS010000002.1 Protein Homology CDS 376014 376730 . + 0 ID=cds-WP_107367094.1;Parent=gene-RM672_RS05330;Dbxref=GenBank:WP_107367094.1;Name=WP_107367094.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168562.1;locus_tag=RM672_RS05330;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_107367094.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 376951 377892 . - . ID=gene-RM672_RS05335;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=RM672_RS05335;old_locus_tag=RM672_05335 NZ_JAVRJS010000002.1 Protein Homology CDS 376951 377892 . - 0 ID=cds-WP_107367093.1;Parent=gene-RM672_RS05335;Dbxref=GenBank:WP_107367093.1;Name=WP_107367093.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=RM672_RS05335;product=malate dehydrogenase;protein_id=WP_107367093.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 378033 378317 . - . ID=gene-RM672_RS05340;Name=RM672_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05340;old_locus_tag=RM672_05340 NZ_JAVRJS010000002.1 Protein Homology CDS 378033 378317 . - 0 ID=cds-WP_037572624.1;Parent=gene-RM672_RS05340;Dbxref=GenBank:WP_037572624.1;Name=WP_037572624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=RM672_RS05340;product=hypothetical protein;protein_id=WP_037572624.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 378342 379250 . - . ID=gene-RM672_RS05345;Name=RM672_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05345;old_locus_tag=RM672_05345 NZ_JAVRJS010000002.1 Protein Homology CDS 378342 379250 . - 0 ID=cds-WP_037572625.1;Parent=gene-RM672_RS05345;Dbxref=GenBank:WP_037572625.1;Name=WP_037572625.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166176.1;locus_tag=RM672_RS05345;product=aldo/keto reductase;protein_id=WP_037572625.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 379271 380191 . - . ID=gene-RM672_RS05350;Name=RM672_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05350;old_locus_tag=RM672_05350 NZ_JAVRJS010000002.1 Protein Homology CDS 379271 380191 . - 0 ID=cds-WP_037572627.1;Parent=gene-RM672_RS05350;Dbxref=GenBank:WP_037572627.1;Name=WP_037572627.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014542.7;locus_tag=RM672_RS05350;product=CobW family GTP-binding protein;protein_id=WP_037572627.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 380412 380849 . + . ID=gene-RM672_RS05355;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=RM672_RS05355;old_locus_tag=RM672_05355 NZ_JAVRJS010000002.1 Protein Homology CDS 380412 380849 . + 0 ID=cds-WP_037572629.1;Parent=gene-RM672_RS05355;Dbxref=GenBank:WP_037572629.1;Name=WP_037572629.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=RM672_RS05355;product=global transcriptional regulator MgrA;protein_id=WP_037572629.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 381218 382861 . - . ID=gene-RM672_RS05360;Name=RM672_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05360;old_locus_tag=RM672_05360 NZ_JAVRJS010000002.1 Protein Homology CDS 381218 382861 . - 0 ID=cds-WP_165806203.1;Parent=gene-RM672_RS05360;Dbxref=GenBank:WP_165806203.1;Name=WP_165806203.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614574.1;locus_tag=RM672_RS05360;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_165806203.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 382918 384522 . - . ID=gene-RM672_RS05365;Name=RM672_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05365;old_locus_tag=RM672_05365 NZ_JAVRJS010000002.1 Protein Homology CDS 382918 384522 . - 0 ID=cds-WP_103159336.1;Parent=gene-RM672_RS05365;Dbxref=GenBank:WP_103159336.1;Name=WP_103159336.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=L-cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737167.1;locus_tag=RM672_RS05365;product=ABC transporter ATP-binding protein/permease;protein_id=WP_103159336.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 384769 385623 . + . ID=gene-RM672_RS05370;Name=RM672_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05370;old_locus_tag=RM672_05370 NZ_JAVRJS010000002.1 Protein Homology CDS 384769 385623 . + 0 ID=cds-WP_105962933.1;Parent=gene-RM672_RS05370;Dbxref=GenBank:WP_105962933.1;Name=WP_105962933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=RM672_RS05370;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_105962933.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 385929 386570 . + . ID=gene-RM672_RS05375;Name=RM672_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05375;old_locus_tag=RM672_05375 NZ_JAVRJS010000002.1 Protein Homology CDS 385929 386570 . + 0 ID=cds-WP_037572638.1;Parent=gene-RM672_RS05375;Dbxref=GenBank:WP_037572638.1;Name=WP_037572638.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168913.1;locus_tag=RM672_RS05375;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_037572638.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 386608 386964 . + . ID=gene-RM672_RS05380;Name=RM672_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05380;old_locus_tag=RM672_05380 NZ_JAVRJS010000002.1 Protein Homology CDS 386608 386964 . + 0 ID=cds-WP_037572641.1;Parent=gene-RM672_RS05380;Dbxref=GenBank:WP_037572641.1;Name=WP_037572641.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499528.1;locus_tag=RM672_RS05380;product=DoxX family protein;protein_id=WP_037572641.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 387321 388628 . + . ID=gene-RM672_RS11495;Name=RM672_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11495 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 387321 388628 . + 0 ID=cds-WP_069191673.1;Parent=gene-RM672_RS11495;Dbxref=GenBank:WP_069191673.1;Name=WP_069191673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11495;product=hypothetical protein;protein_id=WP_069191673.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 388630 389091 . + . ID=gene-RM672_RS05390;Name=RM672_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05390;old_locus_tag=RM672_05390 NZ_JAVRJS010000002.1 Protein Homology CDS 388630 389091 . + 0 ID=cds-WP_105996673.1;Parent=gene-RM672_RS05390;Dbxref=GenBank:WP_105996673.1;Name=WP_105996673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499248.1;locus_tag=RM672_RS05390;product=YaiI/YqxD family protein;protein_id=WP_105996673.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 389091 389657 . + . ID=gene-RM672_RS05395;Name=RM672_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05395;old_locus_tag=RM672_05395 NZ_JAVRJS010000002.1 Protein Homology CDS 389091 389657 . + 0 ID=cds-WP_037573069.1;Parent=gene-RM672_RS05395;Dbxref=GenBank:WP_037573069.1;Name=WP_037573069.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=RM672_RS05395;product=LOG family protein;protein_id=WP_037573069.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 389696 390238 . - . ID=gene-RM672_RS05400;Name=RM672_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05400;old_locus_tag=RM672_05400 NZ_JAVRJS010000002.1 Protein Homology CDS 389696 390238 . - 0 ID=cds-WP_165806204.1;Parent=gene-RM672_RS05400;Dbxref=GenBank:WP_165806204.1;Name=WP_165806204.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481469.1;locus_tag=RM672_RS05400;product=GNAT family N-acetyltransferase;protein_id=WP_165806204.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 390332 390631 . - . ID=gene-RM672_RS05405;Name=RM672_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05405;old_locus_tag=RM672_05405 NZ_JAVRJS010000002.1 Protein Homology CDS 390332 390631 . - 0 ID=cds-WP_037572650.1;Parent=gene-RM672_RS05405;Dbxref=GenBank:WP_037572650.1;Name=WP_037572650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=RM672_RS05405;product=hypothetical protein;protein_id=WP_037572650.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 390732 391058 . - . ID=gene-RM672_RS05410;Name=RM672_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05410;old_locus_tag=RM672_05410 NZ_JAVRJS010000002.1 Protein Homology CDS 390732 391058 . - 0 ID=cds-WP_233650031.1;Parent=gene-RM672_RS05410;Dbxref=GenBank:WP_233650031.1;Name=WP_233650031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166187.1;locus_tag=RM672_RS05410;product=SA0632 family lipoprotein;protein_id=WP_233650031.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 391123 391572 . - . ID=gene-RM672_RS05415;Name=RM672_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05415;old_locus_tag=RM672_05415 NZ_JAVRJS010000002.1 Protein Homology CDS 391123 391572 . - 0 ID=cds-WP_165806205.1;Parent=gene-RM672_RS05415;Dbxref=GenBank:WP_165806205.1;Name=WP_165806205.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF025054.7;locus_tag=RM672_RS05415;product=GNAT family N-acetyltransferase;protein_id=WP_165806205.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 391664 392368 . + . ID=gene-RM672_RS05420;Name=RM672_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05420;old_locus_tag=RM672_05420 NZ_JAVRJS010000002.1 Protein Homology CDS 391664 392368 . + 0 ID=cds-WP_103159333.1;Parent=gene-RM672_RS05420;Dbxref=GenBank:WP_103159333.1;Name=WP_103159333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=RM672_RS05420;product=DUF1129 family protein;protein_id=WP_103159333.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 392571 393059 . - . ID=gene-RM672_RS05425;Name=RM672_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05425;old_locus_tag=RM672_05425 NZ_JAVRJS010000002.1 Protein Homology CDS 392571 393059 . - 0 ID=cds-WP_037572658.1;Parent=gene-RM672_RS05425;Dbxref=GenBank:WP_037572658.1;Name=WP_037572658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187125.1;locus_tag=RM672_RS05425;product=DUF456 domain-containing protein;protein_id=WP_037572658.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 393078 394280 . - . ID=gene-RM672_RS05430;Name=RM672_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05430;old_locus_tag=RM672_05430 NZ_JAVRJS010000002.1 Protein Homology CDS 393078 394280 . - 0 ID=cds-WP_165806206.1;Parent=gene-RM672_RS05430;Dbxref=GenBank:WP_165806206.1;Name=WP_165806206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383172.1;locus_tag=RM672_RS05430;product=sugar efflux transporter;protein_id=WP_165806206.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 394299 395165 . - . ID=gene-RM672_RS05435;Name=RM672_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05435;old_locus_tag=RM672_05435 NZ_JAVRJS010000002.1 Protein Homology CDS 394299 395165 . - 0 ID=cds-WP_037572662.1;Parent=gene-RM672_RS05435;Dbxref=GenBank:WP_037572662.1;Name=WP_037572662.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687413.1;locus_tag=RM672_RS05435;product=LysR family transcriptional regulator;protein_id=WP_037572662.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 395253 395831 . - . ID=gene-RM672_RS05440;Name=RM672_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05440;old_locus_tag=RM672_05440 NZ_JAVRJS010000002.1 Protein Homology CDS 395253 395831 . - 0 ID=cds-WP_069191674.1;Parent=gene-RM672_RS05440;Dbxref=GenBank:WP_069191674.1;Name=WP_069191674.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=RM672_RS05440;product=ribonuclease FAU-1 family protein;protein_id=WP_069191674.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 396048 396761 . - . ID=gene-RM672_RS05445;Name=RM672_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05445;old_locus_tag=RM672_05445 NZ_JAVRJS010000002.1 Protein Homology CDS 396048 396761 . - 0 ID=cds-WP_105962931.1;Parent=gene-RM672_RS05445;Dbxref=GenBank:WP_105962931.1;Name=WP_105962931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424428.1;locus_tag=RM672_RS05445;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_105962931.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 396836 397834 . - . ID=gene-RM672_RS05450;Name=RM672_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05450;old_locus_tag=RM672_05450 NZ_JAVRJS010000002.1 Protein Homology CDS 396836 397834 . - 0 ID=cds-WP_165806207.1;Parent=gene-RM672_RS05450;Dbxref=GenBank:WP_165806207.1;Name=WP_165806207.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=RM672_RS05450;product=HesA/MoeB/ThiF family protein;protein_id=WP_165806207.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 397834 398601 . - . ID=gene-RM672_RS05455;Name=RM672_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05455;old_locus_tag=RM672_05455 NZ_JAVRJS010000002.1 Protein Homology CDS 397834 398601 . - 0 ID=cds-WP_165806208.1;Parent=gene-RM672_RS05455;Dbxref=GenBank:WP_165806208.1;Name=WP_165806208.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728710.1;locus_tag=RM672_RS05455;product=thiazole synthase;protein_id=WP_165806208.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 398603 398803 . - . ID=gene-RM672_RS05460;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=RM672_RS05460;old_locus_tag=RM672_05460 NZ_JAVRJS010000002.1 Protein Homology CDS 398603 398803 . - 0 ID=cds-WP_037572673.1;Parent=gene-RM672_RS05460;Dbxref=GenBank:WP_037572673.1;Name=WP_037572673.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009036520.1;locus_tag=RM672_RS05460;product=sulfur carrier protein ThiS;protein_id=WP_037572673.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 398787 399386 . - . ID=gene-RM672_RS05465;Name=RM672_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05465;old_locus_tag=RM672_05465 NZ_JAVRJS010000002.1 Protein Homology CDS 398787 399386 . - 0 ID=cds-WP_051604941.1;Parent=gene-RM672_RS05465;Dbxref=GenBank:WP_051604941.1;Name=WP_051604941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014622.7;locus_tag=RM672_RS05465;product=thiamine phosphate synthase;protein_id=WP_051604941.1;transl_table=11 NZ_JAVRJS010000002.1 cmsearch riboswitch 399445 399553 . - . ID=id-NZ_JAVRJS010000002.1:399445..399553;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000002.1 RefSeq gene 399568 400203 . - . ID=gene-RM672_RS05470;Name=RM672_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05470;old_locus_tag=RM672_05470 NZ_JAVRJS010000002.1 Protein Homology CDS 399568 400203 . - 0 ID=cds-WP_084275979.1;Parent=gene-RM672_RS05470;Dbxref=GenBank:WP_084275979.1;Name=WP_084275979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472547.1;locus_tag=RM672_RS05470;product=Bax inhibitor-1/YccA family protein;protein_id=WP_084275979.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 400485 401306 . + . ID=gene-RM672_RS05475;Name=RM672_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05475;old_locus_tag=RM672_05475 NZ_JAVRJS010000002.1 Protein Homology CDS 400485 401306 . + 0 ID=cds-WP_311542471.1;Parent=gene-RM672_RS05475;Dbxref=GenBank:WP_311542471.1;Name=WP_311542471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303705.1;locus_tag=RM672_RS05475;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311542471.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 401528 402529 . - . ID=gene-RM672_RS05480;Name=RM672_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05480;old_locus_tag=RM672_05480 NZ_JAVRJS010000002.1 Protein Homology CDS 401528 402529 . - 0 ID=cds-WP_037572676.1;Parent=gene-RM672_RS05480;Dbxref=GenBank:WP_037572676.1;Name=WP_037572676.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=RM672_RS05480;product=inorganic phosphate transporter;protein_id=WP_037572676.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 402544 403161 . - . ID=gene-RM672_RS05485;Name=RM672_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05485;old_locus_tag=RM672_05485 NZ_JAVRJS010000002.1 Protein Homology CDS 402544 403161 . - 0 ID=cds-WP_037572680.1;Parent=gene-RM672_RS05485;Dbxref=GenBank:WP_037572680.1;Name=WP_037572680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=RM672_RS05485;product=DUF47 domain-containing protein;protein_id=WP_037572680.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 403674 404621 . - . ID=gene-RM672_RS05490;Name=RM672_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05490;old_locus_tag=RM672_05490 NZ_JAVRJS010000002.1 Protein Homology CDS 403674 404621 . - 0 ID=cds-WP_037572682.1;Parent=gene-RM672_RS05490;Dbxref=GenBank:WP_037572682.1;Name=WP_037572682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424404.1;locus_tag=RM672_RS05490;product=NAD(P)H-binding protein;protein_id=WP_037572682.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 404734 405240 . + . ID=gene-RM672_RS05495;Name=RM672_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05495;old_locus_tag=RM672_05495 NZ_JAVRJS010000002.1 Protein Homology CDS 404734 405240 . + 0 ID=cds-WP_037572684.1;Parent=gene-RM672_RS05495;Dbxref=GenBank:WP_037572684.1;Name=WP_037572684.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=RM672_RS05495;product=GNAT family N-acetyltransferase;protein_id=WP_037572684.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 405470 406510 . - . ID=gene-RM672_RS05500;Name=RM672_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05500;old_locus_tag=RM672_05500 NZ_JAVRJS010000002.1 Protein Homology CDS 405470 406510 . - 0 ID=cds-WP_037572686.1;Parent=gene-RM672_RS05500;Dbxref=GenBank:WP_037572686.1;Name=WP_037572686.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=RM672_RS05500;product=alpha/beta hydrolase;protein_id=WP_037572686.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 406553 407620 . - . ID=gene-RM672_RS05505;Name=RM672_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05505;old_locus_tag=RM672_05505 NZ_JAVRJS010000002.1 Protein Homology CDS 406553 407620 . - 0 ID=cds-WP_037572688.1;Parent=gene-RM672_RS05505;Dbxref=GenBank:WP_037572688.1;Name=WP_037572688.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=RM672_RS05505;product=YkvI family membrane protein;protein_id=WP_037572688.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 407861 409300 . - . ID=gene-RM672_RS05510;Name=RM672_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05510;old_locus_tag=RM672_05510 NZ_JAVRJS010000002.1 Protein Homology CDS 407861 409300 . - 0 ID=cds-WP_105996668.1;Parent=gene-RM672_RS05510;Dbxref=GenBank:WP_105996668.1;Name=WP_105996668.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166211.1;locus_tag=RM672_RS05510;product=MDR family MFS transporter;protein_id=WP_105996668.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 409489 409989 . - . ID=gene-RM672_RS05515;Name=RM672_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05515;old_locus_tag=RM672_05515 NZ_JAVRJS010000002.1 Protein Homology CDS 409489 409989 . - 0 ID=cds-WP_037572694.1;Parent=gene-RM672_RS05515;Dbxref=GenBank:WP_037572694.1;Name=WP_037572694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490528.1;locus_tag=RM672_RS05515;product=hypothetical protein;protein_id=WP_037572694.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 410155 411171 . - . ID=gene-RM672_RS05520;Name=RM672_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05520;old_locus_tag=RM672_05520 NZ_JAVRJS010000002.1 Protein Homology CDS 410155 411171 . - 0 ID=cds-WP_165806210.1;Parent=gene-RM672_RS05520;Dbxref=GenBank:WP_165806210.1;Name=WP_165806210.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=RM672_RS05520;product=FecCD family ABC transporter permease;protein_id=WP_165806210.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 411168 412127 . - . ID=gene-RM672_RS05525;Name=RM672_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05525;old_locus_tag=RM672_05525 NZ_JAVRJS010000002.1 Protein Homology CDS 411168 412127 . - 0 ID=cds-WP_051604946.1;Parent=gene-RM672_RS05525;Dbxref=GenBank:WP_051604946.1;Name=WP_051604946.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508382.1;locus_tag=RM672_RS05525;product=FecCD family ABC transporter permease;protein_id=WP_051604946.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 412192 412998 . - . ID=gene-RM672_RS05530;Name=RM672_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05530;old_locus_tag=RM672_05530 NZ_JAVRJS010000002.1 Protein Homology CDS 412192 412998 . - 0 ID=cds-WP_103159326.1;Parent=gene-RM672_RS05530;Dbxref=GenBank:WP_103159326.1;Name=WP_103159326.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722609.1;locus_tag=RM672_RS05530;product=ABC transporter ATP-binding protein;protein_id=WP_103159326.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 413272 414105 . - . ID=gene-RM672_RS05535;Name=RM672_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05535;old_locus_tag=RM672_05535 NZ_JAVRJS010000002.1 Protein Homology CDS 413272 414105 . - 0 ID=cds-WP_037572705.1;Parent=gene-RM672_RS05535;Dbxref=GenBank:WP_037572705.1;Name=WP_037572705.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=RM672_RS05535;product=YitT family protein;protein_id=WP_037572705.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 414658 415884 . - . ID=gene-RM672_RS05540;Name=RM672_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05540;old_locus_tag=RM672_05540 NZ_JAVRJS010000002.1 Protein Homology CDS 414658 415884 . - 0 ID=cds-WP_105962924.1;Parent=gene-RM672_RS05540;Dbxref=GenBank:WP_105962924.1;Name=WP_105962924.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=RM672_RS05540;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_105962924.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 416155 416391 . + . ID=gene-RM672_RS05545;Name=RM672_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05545;old_locus_tag=RM672_05545 NZ_JAVRJS010000002.1 Protein Homology CDS 416155 416391 . + 0 ID=cds-WP_103159324.1;Parent=gene-RM672_RS05545;Dbxref=GenBank:WP_103159324.1;Name=WP_103159324.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=RM672_RS05545;product=FeoA family protein;protein_id=WP_103159324.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 416384 418378 . + . ID=gene-RM672_RS05550;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=RM672_RS05550;old_locus_tag=RM672_05550 NZ_JAVRJS010000002.1 Protein Homology CDS 416384 418378 . + 0 ID=cds-WP_107367087.1;Parent=gene-RM672_RS05550;Dbxref=GenBank:WP_107367087.1;Name=WP_107367087.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424392.1;locus_tag=RM672_RS05550;product=ferrous iron transport protein B;protein_id=WP_107367087.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 418390 418551 . + . ID=gene-RM672_RS05555;Name=RM672_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05555;old_locus_tag=RM672_05555 NZ_JAVRJS010000002.1 Protein Homology CDS 418390 418551 . + 0 ID=cds-WP_037572717.1;Parent=gene-RM672_RS05555;Dbxref=GenBank:WP_037572717.1;Name=WP_037572717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424391.1;locus_tag=RM672_RS05555;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_037572717.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 418602 420326 . - . ID=gene-RM672_RS05560;Name=RM672_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05560;old_locus_tag=RM672_05560 NZ_JAVRJS010000002.1 Protein Homology CDS 418602 420326 . - 0 ID=cds-WP_037572719.1;Parent=gene-RM672_RS05560;Dbxref=GenBank:WP_037572719.1;Name=WP_037572719.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=RM672_RS05560;product=ABC transporter ATP-binding protein;protein_id=WP_037572719.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 420584 421867 . + . ID=gene-RM672_RS05565;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=RM672_RS05565;old_locus_tag=RM672_05565 NZ_JAVRJS010000002.1 Protein Homology CDS 420584 421867 . + 0 ID=cds-WP_103159322.1;Parent=gene-RM672_RS05565;Dbxref=GenBank:WP_103159322.1;Name=WP_103159322.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499206.1;locus_tag=RM672_RS05565;product=penicillin-binding protein PBP4;protein_id=WP_103159322.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 421917 422315 . - . ID=gene-RM672_RS05570;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=RM672_RS05570;old_locus_tag=RM672_05570 NZ_JAVRJS010000002.1 Protein Homology CDS 421917 422315 . - 0 ID=cds-WP_037572723.1;Parent=gene-RM672_RS05570;Dbxref=GenBank:WP_037572723.1;Name=WP_037572723.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=RM672_RS05570;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_037572723.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 422459 423550 . - . ID=gene-RM672_RS05575;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=RM672_RS05575;old_locus_tag=RM672_05575 NZ_JAVRJS010000002.1 Protein Homology CDS 422459 423550 . - 0 ID=cds-WP_105965117.1;Parent=gene-RM672_RS05575;Dbxref=GenBank:WP_105965117.1;Name=WP_105965117.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=RM672_RS05575;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_105965117.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 423730 424533 . - . ID=gene-RM672_RS05580;Name=RM672_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05580;old_locus_tag=RM672_05580 NZ_JAVRJS010000002.1 Protein Homology CDS 423730 424533 . - 0 ID=cds-WP_037573082.1;Parent=gene-RM672_RS05580;Dbxref=GenBank:WP_037573082.1;Name=WP_037573082.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=RM672_RS05580;product=ABC transporter permease;protein_id=WP_037573082.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 424934 425728 . + . ID=gene-RM672_RS05585;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=RM672_RS05585;old_locus_tag=RM672_05585 NZ_JAVRJS010000002.1 Protein Homology CDS 424934 425728 . + 0 ID=cds-WP_037572727.1;Parent=gene-RM672_RS05585;Dbxref=GenBank:WP_037572727.1;Name=WP_037572727.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=RM672_RS05585;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_037572727.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 425882 426652 . - . ID=gene-RM672_RS05590;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=RM672_RS05590;old_locus_tag=RM672_05590 NZ_JAVRJS010000002.1 Protein Homology CDS 425882 426652 . - 0 ID=cds-WP_037573084.1;Parent=gene-RM672_RS05590;Dbxref=GenBank:WP_037573084.1;Name=WP_037573084.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424384.1;locus_tag=RM672_RS05590;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_037573084.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 426945 427052 . + . ID=gene-RM672_RS11420;Name=RM672_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11420 NZ_JAVRJS010000002.1 Protein Homology CDS 426945 427052 . + 0 ID=cds-WP_105962920.1;Parent=gene-RM672_RS11420;Dbxref=GenBank:WP_105962920.1;Name=WP_105962920.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: protein motif:HMM:NF023880.7;locus_tag=RM672_RS11420;product=maltose acetyltransferase domain-containing protein;protein_id=WP_105962920.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq pseudogene 427328 427539 . + . ID=gene-RM672_RS11425;Name=RM672_RS11425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11425;partial=true;pseudo=true;start_range=.,427328 NZ_JAVRJS010000002.1 Protein Homology CDS 427328 427539 . + 0 ID=cds-RM672_RS11425;Parent=gene-RM672_RS11425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1;locus_tag=RM672_RS11425;partial=true;product=DapH/DapD/GlmU-related protein;pseudo=true;start_range=.,427328;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 427571 428317 . + . ID=gene-RM672_RS05600;Name=RM672_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05600;old_locus_tag=RM672_05600 NZ_JAVRJS010000002.1 Protein Homology CDS 427571 428317 . + 0 ID=cds-WP_037572729.1;Parent=gene-RM672_RS05600;Dbxref=GenBank:WP_037572729.1;Name=WP_037572729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424383.1;locus_tag=RM672_RS05600;product=M50 family metallopeptidase;protein_id=WP_037572729.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 428471 429121 . - . ID=gene-RM672_RS05605;Name=RM672_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05605;old_locus_tag=RM672_05605 NZ_JAVRJS010000002.1 Protein Homology CDS 428471 429121 . - 0 ID=cds-WP_037572731.1;Parent=gene-RM672_RS05605;Dbxref=GenBank:WP_037572731.1;Name=WP_037572731.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459837.1;locus_tag=RM672_RS05605;product=metal-dependent transcriptional regulator;protein_id=WP_037572731.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 429242 430018 . + . ID=gene-RM672_RS05610;Name=RM672_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05610;old_locus_tag=RM672_05610 NZ_JAVRJS010000002.1 Protein Homology CDS 429242 430018 . + 0 ID=cds-WP_037572733.1;Parent=gene-RM672_RS05610;Dbxref=GenBank:WP_037572733.1;Name=WP_037572733.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424381.1;locus_tag=RM672_RS05610;product=metal ABC transporter ATP-binding protein;protein_id=WP_037572733.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 429993 430832 . + . ID=gene-RM672_RS05615;Name=RM672_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05615;old_locus_tag=RM672_05615 NZ_JAVRJS010000002.1 Protein Homology CDS 429993 430832 . + 0 ID=cds-WP_037572735.1;Parent=gene-RM672_RS05615;Dbxref=GenBank:WP_037572735.1;Name=WP_037572735.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=RM672_RS05615;product=metal ABC transporter permease;protein_id=WP_037572735.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 430832 431746 . + . ID=gene-RM672_RS05620;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=RM672_RS05620;old_locus_tag=RM672_05620 NZ_JAVRJS010000002.1 Protein Homology CDS 430832 431746 . + 0 ID=cds-WP_037573086.1;Parent=gene-RM672_RS05620;Dbxref=GenBank:WP_037573086.1;Name=WP_037573086.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737654.1;locus_tag=RM672_RS05620;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_037573086.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 432331 432774 . - . ID=gene-RM672_RS05625;Name=RM672_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05625;old_locus_tag=RM672_05625 NZ_JAVRJS010000002.1 Protein Homology CDS 432331 432774 . - 0 ID=cds-WP_103159317.1;Parent=gene-RM672_RS05625;Dbxref=GenBank:WP_103159317.1;Name=WP_103159317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424378.1;locus_tag=RM672_RS05625;product=Na+/H+ antiporter subunit G;protein_id=WP_103159317.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 432749 433051 . - . ID=gene-RM672_RS05630;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=RM672_RS05630;old_locus_tag=RM672_05630 NZ_JAVRJS010000002.1 Protein Homology CDS 432749 433051 . - 0 ID=cds-WP_037572739.1;Parent=gene-RM672_RS05630;Dbxref=GenBank:WP_037572739.1;Name=WP_037572739.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276529.1;locus_tag=RM672_RS05630;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WP_037572739.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 433048 433530 . - . ID=gene-RM672_RS05635;Name=RM672_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05635;old_locus_tag=RM672_05635 NZ_JAVRJS010000002.1 Protein Homology CDS 433048 433530 . - 0 ID=cds-WP_037572741.1;Parent=gene-RM672_RS05635;Dbxref=GenBank:WP_037572741.1;Name=WP_037572741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071971.1;locus_tag=RM672_RS05635;product=Na+/H+ antiporter subunit E;protein_id=WP_037572741.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 433527 435029 . - . ID=gene-RM672_RS05640;Name=RM672_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05640;old_locus_tag=RM672_05640 NZ_JAVRJS010000002.1 Protein Homology CDS 433527 435029 . - 0 ID=cds-WP_037572743.1;Parent=gene-RM672_RS05640;Dbxref=GenBank:WP_037572743.1;Name=WP_037572743.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499190.1;locus_tag=RM672_RS05640;product=Na+/H+ antiporter subunit D;protein_id=WP_037572743.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 435022 435366 . - . ID=gene-RM672_RS05645;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=RM672_RS05645;old_locus_tag=RM672_05645 NZ_JAVRJS010000002.1 Protein Homology CDS 435022 435366 . - 0 ID=cds-WP_037572746.1;Parent=gene-RM672_RS05645;Dbxref=GenBank:WP_037572746.1;Name=WP_037572746.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441278.1;locus_tag=RM672_RS05645;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_037572746.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 435363 435788 . - . ID=gene-RM672_RS05650;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=RM672_RS05650;old_locus_tag=RM672_05650 NZ_JAVRJS010000002.1 Protein Homology CDS 435363 435788 . - 0 ID=cds-WP_037572748.1;Parent=gene-RM672_RS05650;Dbxref=GenBank:WP_037572748.1;Name=WP_037572748.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=RM672_RS05650;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WP_037572748.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 435775 438159 . - . ID=gene-RM672_RS05655;Name=RM672_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05655;old_locus_tag=RM672_05655 NZ_JAVRJS010000002.1 Protein Homology CDS 435775 438159 . - 0 ID=cds-WP_037572750.1;Parent=gene-RM672_RS05655;Dbxref=GenBank:WP_037572750.1;Name=WP_037572750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276534.1;locus_tag=RM672_RS05655;product=DUF4040 family protein;protein_id=WP_037572750.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 438185 438736 . - . ID=gene-RM672_RS05660;Name=RM672_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05660;old_locus_tag=RM672_05660 NZ_JAVRJS010000002.1 Protein Homology CDS 438185 438736 . - 0 ID=cds-WP_037572752.1;Parent=gene-RM672_RS05660;Dbxref=GenBank:WP_037572752.1;Name=WP_037572752.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=RM672_RS05660;product=tyrosine-type recombinase/integrase;protein_id=WP_037572752.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 438881 439084 . + . ID=gene-RM672_RS05665;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=RM672_RS05665;old_locus_tag=RM672_05665 NZ_JAVRJS010000002.1 Protein Homology CDS 438881 439084 . + 0 ID=cds-WP_037572754.1;Parent=gene-RM672_RS05665;Dbxref=GenBank:WP_037572754.1;Name=WP_037572754.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=RM672_RS05665;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_037572754.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 439099 439314 . + . ID=gene-RM672_RS05670;Name=RM672_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05670;old_locus_tag=RM672_05670 NZ_JAVRJS010000002.1 Protein Homology CDS 439099 439314 . + 0 ID=cds-WP_311541329.1;Parent=gene-RM672_RS05670;Dbxref=GenBank:WP_311541329.1;Name=WP_311541329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424369.1;locus_tag=RM672_RS05670;product=DUF2922 domain-containing protein;protein_id=WP_311541329.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 439768 439953 . - . ID=gene-RM672_RS05675;Name=RM672_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05675 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 439768 439953 . - 0 ID=cds-WP_051604942.1;Parent=gene-RM672_RS05675;Dbxref=GenBank:WP_051604942.1;Name=WP_051604942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS05675;product=hypothetical protein;protein_id=WP_051604942.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 440187 441110 . + . ID=gene-RM672_RS05680;Name=RM672_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05680;old_locus_tag=RM672_05675 NZ_JAVRJS010000002.1 Protein Homology CDS 440187 441110 . + 0 ID=cds-WP_037572757.1;Parent=gene-RM672_RS05680;Dbxref=GenBank:WP_037572757.1;Name=WP_037572757.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=RM672_RS05680;product=DMT family transporter;protein_id=WP_037572757.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 441471 442385 . + . ID=gene-RM672_RS05685;Name=RM672_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05685;old_locus_tag=RM672_05680 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 441471 442385 . + 0 ID=cds-WP_037572758.1;Parent=gene-RM672_RS05685;Dbxref=GenBank:WP_037572758.1;Name=WP_037572758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS05685;product=hypothetical protein;protein_id=WP_037572758.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 442735 443106 . + . ID=gene-RM672_RS05690;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=RM672_RS05690;old_locus_tag=RM672_05685 NZ_JAVRJS010000002.1 Protein Homology CDS 442735 443106 . + 0 ID=cds-WP_037566374.1;Parent=gene-RM672_RS05690;Dbxref=GenBank:WP_037566374.1;Name=WP_037566374.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=RM672_RS05690;product=global transcriptional regulator SarA;protein_id=WP_037566374.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 443297 444079 . - . ID=gene-RM672_RS05695;Name=RM672_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05695;old_locus_tag=RM672_05690 NZ_JAVRJS010000002.1 Protein Homology CDS 443297 444079 . - 0 ID=cds-WP_037572759.1;Parent=gene-RM672_RS05695;Dbxref=GenBank:WP_037572759.1;Name=WP_037572759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.7;locus_tag=RM672_RS05695;product=alpha/beta fold hydrolase;protein_id=WP_037572759.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 444238 444954 . - . ID=gene-RM672_RS05700;Name=RM672_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05700;old_locus_tag=RM672_05695 NZ_JAVRJS010000002.1 Protein Homology CDS 444238 444954 . - 0 ID=cds-WP_037572763.1;Parent=gene-RM672_RS05700;Dbxref=GenBank:WP_037572763.1;Name=WP_037572763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898709.1;locus_tag=RM672_RS05700;product=hypothetical protein;protein_id=WP_037572763.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 445118 445624 . - . ID=gene-RM672_RS05705;Name=RM672_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05705;old_locus_tag=RM672_05700 NZ_JAVRJS010000002.1 Protein Homology CDS 445118 445624 . - 0 ID=cds-WP_105962918.1;Parent=gene-RM672_RS05705;Dbxref=GenBank:WP_105962918.1;Name=WP_105962918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=RM672_RS05705;product=SA0570 family protein;protein_id=WP_105962918.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 445717 446514 . - . ID=gene-RM672_RS05710;Name=RM672_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05710;old_locus_tag=RM672_05705 NZ_JAVRJS010000002.1 Protein Homology CDS 445717 446514 . - 0 ID=cds-WP_105965111.1;Parent=gene-RM672_RS05710;Dbxref=GenBank:WP_105965111.1;Name=WP_105965111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484047.1;locus_tag=RM672_RS05710;product=alpha/beta fold hydrolase;protein_id=WP_105965111.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 446514 447218 . - . ID=gene-RM672_RS05715;Name=RM672_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05715;old_locus_tag=RM672_05710 NZ_JAVRJS010000002.1 Protein Homology CDS 446514 447218 . - 0 ID=cds-WP_105965110.1;Parent=gene-RM672_RS05715;Dbxref=GenBank:WP_105965110.1;Name=WP_105965110.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=RM672_RS05715;product=HAD family hydrolase;protein_id=WP_105965110.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 447314 448279 . - . ID=gene-RM672_RS05720;Name=RM672_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05720;old_locus_tag=RM672_05715 NZ_JAVRJS010000002.1 Protein Homology CDS 447314 448279 . - 0 ID=cds-WP_233655888.1;Parent=gene-RM672_RS05720;Dbxref=GenBank:WP_233655888.1;Name=WP_233655888.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=RM672_RS05720;product=FecCD family ABC transporter permease;protein_id=WP_233655888.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 448266 449150 . - . ID=gene-RM672_RS05725;Name=RM672_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05725;old_locus_tag=RM672_05720 NZ_JAVRJS010000002.1 Protein Homology CDS 448266 449150 . - 0 ID=cds-WP_105996662.1;Parent=gene-RM672_RS05725;Dbxref=GenBank:WP_105996662.1;Name=WP_105996662.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=RM672_RS05725;product=ABC transporter substrate-binding protein;protein_id=WP_105996662.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 449311 450969 . - . ID=gene-RM672_RS05730;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=RM672_RS05730;old_locus_tag=RM672_05725 NZ_JAVRJS010000002.1 Protein Homology CDS 449311 450969 . - 0 ID=cds-WP_037572777.1;Parent=gene-RM672_RS05730;Dbxref=GenBank:WP_037572777.1;Name=WP_037572777.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=RM672_RS05730;product=arginine--tRNA ligase;protein_id=WP_037572777.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 450956 451381 . - . ID=gene-RM672_RS05735;Name=RM672_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05735;old_locus_tag=RM672_05730 NZ_JAVRJS010000002.1 Protein Homology CDS 450956 451381 . - 0 ID=cds-WP_037572779.1;Parent=gene-RM672_RS05735;Dbxref=GenBank:WP_037572779.1;Name=WP_037572779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359087.1;locus_tag=RM672_RS05735;product=YwiB family protein;protein_id=WP_037572779.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 451492 451998 . - . ID=gene-RM672_RS05740;Name=RM672_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05740;old_locus_tag=RM672_05735 NZ_JAVRJS010000002.1 Protein Homology CDS 451492 451998 . - 0 ID=cds-WP_037572782.1;Parent=gene-RM672_RS05740;Dbxref=GenBank:WP_037572782.1;Name=WP_037572782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384646.1;locus_tag=RM672_RS05740;product=YwhD family protein;protein_id=WP_037572782.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 452022 453323 . - . ID=gene-RM672_RS05745;Name=RM672_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05745;old_locus_tag=RM672_05740 NZ_JAVRJS010000002.1 Protein Homology CDS 452022 453323 . - 0 ID=cds-WP_311542472.1;Parent=gene-RM672_RS05745;Dbxref=GenBank:WP_311542472.1;Name=WP_311542472.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=RM672_RS05745;product=HD domain-containing protein;protein_id=WP_311542472.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 453345 453827 . - . ID=gene-RM672_RS05750;Name=RM672_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05750;old_locus_tag=RM672_05745 NZ_JAVRJS010000002.1 Protein Homology CDS 453345 453827 . - 0 ID=cds-WP_037572788.1;Parent=gene-RM672_RS05750;Dbxref=GenBank:WP_037572788.1;Name=WP_037572788.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=RM672_RS05750;product=GNAT family N-acetyltransferase;protein_id=WP_037572788.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 453995 454534 . - . ID=gene-RM672_RS05755;Name=RM672_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05755;old_locus_tag=RM672_05750 NZ_JAVRJS010000002.1 Protein Homology CDS 453995 454534 . - 0 ID=cds-WP_105996661.1;Parent=gene-RM672_RS05755;Dbxref=GenBank:WP_105996661.1;Name=WP_105996661.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176045.1;locus_tag=RM672_RS05755;product=flavodoxin family protein;protein_id=WP_105996661.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 454923 455270 . - . ID=gene-RM672_RS05760;Name=RM672_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05760;old_locus_tag=RM672_05755 NZ_JAVRJS010000002.1 Protein Homology CDS 454923 455270 . - 0 ID=cds-WP_037572793.1;Parent=gene-RM672_RS05760;Dbxref=GenBank:WP_037572793.1;Name=WP_037572793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=RM672_RS05760;product=YuzB family protein;protein_id=WP_037572793.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 455392 456933 . - . ID=gene-RM672_RS05765;Name=RM672_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05765;old_locus_tag=RM672_05760 NZ_JAVRJS010000002.1 Protein Homology CDS 455392 456933 . - 0 ID=cds-WP_373368836.1;Parent=gene-RM672_RS05765;Dbxref=GenBank:WP_373368836.1;Name=WP_373368836.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509151.1;locus_tag=RM672_RS05765;product=SLC13 family permease;protein_id=WP_373368836.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 457636 458103 . - . ID=gene-RM672_RS05770;Name=RM672_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05770;old_locus_tag=RM672_05765 NZ_JAVRJS010000002.1 Protein Homology CDS 457636 458103 . - 0 ID=cds-WP_037572799.1;Parent=gene-RM672_RS05770;Dbxref=GenBank:WP_037572799.1;Name=WP_037572799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303973.1;locus_tag=RM672_RS05770;product=threonine/serine exporter family protein;protein_id=WP_037572799.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 458108 458824 . - . ID=gene-RM672_RS05775;Name=RM672_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05775;old_locus_tag=RM672_05770 NZ_JAVRJS010000002.1 Protein Homology CDS 458108 458824 . - 0 ID=cds-WP_311541337.1;Parent=gene-RM672_RS05775;Dbxref=GenBank:WP_311541337.1;Name=WP_311541337.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166290.1;locus_tag=RM672_RS05775;product=threonine/serine exporter family protein;protein_id=WP_311541337.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 458903 460249 . - . ID=gene-RM672_RS05780;Name=RM672_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05780;old_locus_tag=RM672_05775 NZ_JAVRJS010000002.1 Protein Homology CDS 458903 460249 . - 0 ID=cds-WP_037572803.1;Parent=gene-RM672_RS05780;Dbxref=GenBank:WP_037572803.1;Name=WP_037572803.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912338.1;locus_tag=RM672_RS05780;product=APC family permease;protein_id=WP_037572803.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 460481 461230 . - . ID=gene-RM672_RS05785;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=RM672_RS05785;old_locus_tag=RM672_05780 NZ_JAVRJS010000002.1 Protein Homology CDS 460481 461230 . - 0 ID=cds-WP_037572806.1;Parent=gene-RM672_RS05785;Dbxref=GenBank:WP_037572806.1;Name=WP_037572806.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=RM672_RS05785;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_037572806.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 461479 462468 . + . ID=gene-RM672_RS05790;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=RM672_RS05790;old_locus_tag=RM672_05785 NZ_JAVRJS010000002.1 Protein Homology CDS 461479 462468 . + 0 ID=cds-WP_103159310.1;Parent=gene-RM672_RS05790;Dbxref=GenBank:WP_103159310.1;Name=WP_103159310.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=RM672_RS05790;product=phosphate acetyltransferase;protein_id=WP_103159310.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 462468 463304 . + . ID=gene-RM672_RS05795;Name=RM672_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05795;old_locus_tag=RM672_05790 NZ_JAVRJS010000002.1 Protein Homology CDS 462468 463304 . + 0 ID=cds-WP_037572811.1;Parent=gene-RM672_RS05795;Dbxref=GenBank:WP_037572811.1;Name=WP_037572811.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=RM672_RS05795;product=lipoate--protein ligase family protein;protein_id=WP_037572811.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 463371 465119 . - . ID=gene-RM672_RS05800;Name=RM672_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05800;old_locus_tag=RM672_05795 NZ_JAVRJS010000002.1 Protein Homology CDS 463371 465119 . - 0 ID=cds-WP_037572813.1;Parent=gene-RM672_RS05800;Dbxref=GenBank:WP_037572813.1;Name=WP_037572813.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167958.1;locus_tag=RM672_RS05800;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_037572813.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 465138 465785 . - . ID=gene-RM672_RS05805;Name=RM672_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05805;old_locus_tag=RM672_05800 NZ_JAVRJS010000002.1 Protein Homology CDS 465138 465785 . - 0 ID=cds-WP_105996660.1;Parent=gene-RM672_RS05805;Dbxref=GenBank:WP_105996660.1;Name=WP_105996660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=RM672_RS05805;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_105996660.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 465912 466469 . + . ID=gene-RM672_RS05810;Name=RM672_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05810;old_locus_tag=RM672_05805 NZ_JAVRJS010000002.1 Protein Homology CDS 465912 466469 . + 0 ID=cds-WP_105996659.1;Parent=gene-RM672_RS05810;Dbxref=GenBank:WP_105996659.1;Name=WP_105996659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167960.1;locus_tag=RM672_RS05810;product=TetR/AcrR family transcriptional regulator;protein_id=WP_105996659.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 466738 467295 . - . ID=gene-RM672_RS05815;Name=RM672_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05815;old_locus_tag=RM672_05810 NZ_JAVRJS010000002.1 Protein Homology CDS 466738 467295 . - 0 ID=cds-WP_157946554.1;Parent=gene-RM672_RS05815;Dbxref=GenBank:WP_157946554.1;Name=WP_157946554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=RM672_RS05815;product=GNAT family N-acetyltransferase;protein_id=WP_157946554.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 467499 468950 . - . ID=gene-RM672_RS05820;Name=RM672_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05820;old_locus_tag=RM672_05815 NZ_JAVRJS010000002.1 Protein Homology CDS 467499 468950 . - 0 ID=cds-WP_311541331.1;Parent=gene-RM672_RS05820;Dbxref=GenBank:WP_311541331.1;Name=WP_311541331.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499138.1;locus_tag=RM672_RS05820;product=APC family permease;protein_id=WP_311541331.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 469077 469439 . - . ID=gene-RM672_RS05825;Name=RM672_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05825;old_locus_tag=RM672_05820 NZ_JAVRJS010000002.1 Protein Homology CDS 469077 469439 . - 0 ID=cds-WP_311542473.1;Parent=gene-RM672_RS05825;Dbxref=GenBank:WP_311542473.1;Name=WP_311542473.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=RM672_RS05825;product=DUF423 domain-containing protein;protein_id=WP_311542473.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 469456 469800 . - . ID=gene-RM672_RS05830;Name=RM672_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05830;old_locus_tag=RM672_05825 NZ_JAVRJS010000002.1 Protein Homology CDS 469456 469800 . - 0 ID=cds-WP_103159306.1;Parent=gene-RM672_RS05830;Dbxref=GenBank:WP_103159306.1;Name=WP_103159306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=RM672_RS05830;product=DUF5327 family protein;protein_id=WP_103159306.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 469793 470461 . - . ID=gene-RM672_RS05835;Name=RM672_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05835;old_locus_tag=RM672_05830 NZ_JAVRJS010000002.1 Protein Homology CDS 469793 470461 . - 0 ID=cds-WP_037572834.1;Parent=gene-RM672_RS05835;Dbxref=GenBank:WP_037572834.1;Name=WP_037572834.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=RM672_RS05835;product=uracil-DNA glycosylase;protein_id=WP_037572834.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 470593 471423 . + . ID=gene-RM672_RS05840;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM672_RS05840;old_locus_tag=RM672_05835 NZ_JAVRJS010000002.1 Protein Homology CDS 470593 471423 . + 0 ID=cds-WP_105962912.1;Parent=gene-RM672_RS05840;Dbxref=GenBank:WP_105962912.1;Name=WP_105962912.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=RM672_RS05840;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_105962912.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 471683 471952 . - . ID=gene-RM672_RS05845;Name=RM672_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05845;old_locus_tag=RM672_05840 NZ_JAVRJS010000002.1 Protein Homology CDS 471683 471952 . - 0 ID=cds-WP_037572840.1;Parent=gene-RM672_RS05845;Dbxref=GenBank:WP_037572840.1;Name=WP_037572840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276670.1;locus_tag=RM672_RS05845;product=hypothetical protein;protein_id=WP_037572840.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 471952 472308 . - . ID=gene-RM672_RS05850;Name=RM672_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05850;old_locus_tag=RM672_05845 NZ_JAVRJS010000002.1 Protein Homology CDS 471952 472308 . - 0 ID=cds-WP_107366410.1;Parent=gene-RM672_RS05850;Dbxref=GenBank:WP_107366410.1;Name=WP_107366410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055022.1;locus_tag=RM672_RS05850;product=VraC family protein;protein_id=WP_107366410.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 472277 473422 . - . ID=gene-RM672_RS05855;Name=RM672_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05855;old_locus_tag=RM672_05850 NZ_JAVRJS010000002.1 Protein Homology CDS 472277 473422 . - 0 ID=cds-WP_107366411.1;Parent=gene-RM672_RS05855;Dbxref=GenBank:WP_107366411.1;Name=WP_107366411.1;Ontology_term=GO:0006635,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508455.1;locus_tag=RM672_RS05855;product=thiolase family protein;protein_id=WP_107366411.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 473415 474773 . - . ID=gene-RM672_RS05860;Name=RM672_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05860;old_locus_tag=RM672_05855 NZ_JAVRJS010000002.1 Protein Homology CDS 473415 474773 . - 0 ID=cds-WP_241955682.1;Parent=gene-RM672_RS05860;Dbxref=GenBank:WP_241955682.1;Name=WP_241955682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165753.1;locus_tag=RM672_RS05860;product=AMP-binding protein;protein_id=WP_241955682.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 474908 475453 . - . ID=gene-RM672_RS05865;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=RM672_RS05865;old_locus_tag=RM672_05860 NZ_JAVRJS010000002.1 Protein Homology CDS 474908 475453 . - 0 ID=cds-WP_037572853.1;Parent=gene-RM672_RS05865;Dbxref=GenBank:WP_037572853.1;Name=WP_037572853.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387319.1;locus_tag=RM672_RS05865;product=6-phospho-3-hexuloisomerase;protein_id=WP_037572853.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 475455 476093 . - . ID=gene-RM672_RS05870;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=RM672_RS05870;old_locus_tag=RM672_05865 NZ_JAVRJS010000002.1 Protein Homology CDS 475455 476093 . - 0 ID=cds-WP_107366413.1;Parent=gene-RM672_RS05870;Dbxref=GenBank:WP_107366413.1;Name=WP_107366413.1;Ontology_term=GO:0005975,GO:0019649,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation|0019649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=RM672_RS05870;product=3-hexulose-6-phosphate synthase;protein_id=WP_107366413.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 476177 476905 . - . ID=gene-RM672_RS05875;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=RM672_RS05875;old_locus_tag=RM672_05870 NZ_JAVRJS010000002.1 Protein Homology CDS 476177 476905 . - 0 ID=cds-WP_037572858.1;Parent=gene-RM672_RS05875;Dbxref=GenBank:WP_037572858.1;Name=WP_037572858.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441156.1;locus_tag=RM672_RS05875;product=glucosamine-6-phosphate deaminase;protein_id=WP_037572858.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 477142 477501 . + . ID=gene-RM672_RS05880;Name=RM672_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05880;old_locus_tag=RM672_05875 NZ_JAVRJS010000002.1 Protein Homology CDS 477142 477501 . + 0 ID=cds-WP_037572861.1;Parent=gene-RM672_RS05880;Dbxref=GenBank:WP_037572861.1;Name=WP_037572861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001795843.1;locus_tag=RM672_RS05880;product=YojF family protein;protein_id=WP_037572861.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 477513 478202 . + . ID=gene-RM672_RS05885;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=RM672_RS05885;old_locus_tag=RM672_05880 NZ_JAVRJS010000002.1 Protein Homology CDS 477513 478202 . + 0 ID=cds-WP_037572863.1;Parent=gene-RM672_RS05885;Dbxref=GenBank:WP_037572863.1;Name=WP_037572863.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455710.1;locus_tag=RM672_RS05885;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_037572863.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 478279 479157 . + . ID=gene-RM672_RS05890;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=RM672_RS05890;old_locus_tag=RM672_05885 NZ_JAVRJS010000002.1 Protein Homology CDS 478279 479157 . + 0 ID=cds-WP_037572866.1;Parent=gene-RM672_RS05890;Dbxref=GenBank:WP_037572866.1;Name=WP_037572866.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=RM672_RS05890;product=GTP cyclohydrolase FolE2;protein_id=WP_037572866.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 479215 479781 . - . ID=gene-RM672_RS05895;Name=RM672_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05895;old_locus_tag=RM672_05890 NZ_JAVRJS010000002.1 Protein Homology CDS 479215 479781 . - 0 ID=cds-WP_037572869.1;Parent=gene-RM672_RS05895;Dbxref=GenBank:WP_037572869.1;Name=WP_037572869.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464116.1;locus_tag=RM672_RS05895;product=NADPH-dependent FMN reductase;protein_id=WP_037572869.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 479796 480665 . - . ID=gene-RM672_RS05900;Name=RM672_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05900;old_locus_tag=RM672_05895 NZ_JAVRJS010000002.1 Protein Homology CDS 479796 480665 . - 0 ID=cds-WP_037572873.1;Parent=gene-RM672_RS05900;Dbxref=GenBank:WP_037572873.1;Name=WP_037572873.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276687.1;locus_tag=RM672_RS05900;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037572873.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 480833 481330 . - . ID=gene-RM672_RS05905;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=RM672_RS05905;old_locus_tag=RM672_05900 NZ_JAVRJS010000002.1 Protein Homology CDS 480833 481330 . - 0 ID=cds-WP_105965095.1;Parent=gene-RM672_RS05905;Dbxref=GenBank:WP_105965095.1;Name=WP_105965095.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455718.1;locus_tag=RM672_RS05905;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_105965095.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 481398 482015 . + . ID=gene-RM672_RS05910;Name=RM672_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05910;old_locus_tag=RM672_05905 NZ_JAVRJS010000002.1 Protein Homology CDS 481398 482015 . + 0 ID=cds-WP_103159298.1;Parent=gene-RM672_RS05910;Dbxref=GenBank:WP_103159298.1;Name=WP_103159298.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723522.1;locus_tag=RM672_RS05910;product=deoxynucleoside kinase;protein_id=WP_103159298.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 482008 482673 . + . ID=gene-RM672_RS05915;Name=RM672_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05915;old_locus_tag=RM672_05910 NZ_JAVRJS010000002.1 Protein Homology CDS 482008 482673 . + 0 ID=cds-WP_105965094.1;Parent=gene-RM672_RS05915;Dbxref=GenBank:WP_105965094.1;Name=WP_105965094.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464122.1;locus_tag=RM672_RS05915;product=deoxynucleoside kinase;protein_id=WP_105965094.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 482710 483399 . - . ID=gene-RM672_RS05920;Name=RM672_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05920;old_locus_tag=RM672_05915 NZ_JAVRJS010000002.1 Protein Homology CDS 482710 483399 . - 0 ID=cds-WP_105965093.1;Parent=gene-RM672_RS05920;Dbxref=GenBank:WP_105965093.1;Name=WP_105965093.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424315.1;locus_tag=RM672_RS05920;product=HAD family hydrolase;protein_id=WP_105965093.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 483787 484767 . - . ID=gene-RM672_RS05925;Name=RM672_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05925;old_locus_tag=RM672_05920 NZ_JAVRJS010000002.1 Protein Homology CDS 483787 484767 . - 0 ID=cds-WP_037572892.1;Parent=gene-RM672_RS05925;Dbxref=GenBank:WP_037572892.1;Name=WP_037572892.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474518.1;locus_tag=RM672_RS05925;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_037572892.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 484854 486092 . + . ID=gene-RM672_RS05930;Name=RM672_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05930;old_locus_tag=RM672_05925 NZ_JAVRJS010000002.1 Protein Homology CDS 484854 486092 . + 0 ID=cds-WP_105965092.1;Parent=gene-RM672_RS05930;Dbxref=GenBank:WP_105965092.1;Name=WP_105965092.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167715.1;locus_tag=RM672_RS05930;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_105965092.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 486089 486901 . + . ID=gene-RM672_RS05935;Name=RM672_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05935;old_locus_tag=RM672_05930 NZ_JAVRJS010000002.1 Protein Homology CDS 486089 486901 . + 0 ID=cds-WP_037572897.1;Parent=gene-RM672_RS05935;Dbxref=GenBank:WP_037572897.1;Name=WP_037572897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167714.1;locus_tag=RM672_RS05935;product=HAD-IIB family hydrolase;protein_id=WP_037572897.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 486894 487937 . + . ID=gene-RM672_RS05940;Name=RM672_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05940;old_locus_tag=RM672_05935 NZ_JAVRJS010000002.1 Protein Homology CDS 486894 487937 . + 0 ID=cds-WP_311541332.1;Parent=gene-RM672_RS05940;Dbxref=GenBank:WP_311541332.1;Name=WP_311541332.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474544.1;locus_tag=RM672_RS05940;product=Gfo/Idh/MocA family protein;protein_id=WP_311541332.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 487967 489052 . + . ID=gene-RM672_RS05945;Name=RM672_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05945;old_locus_tag=RM672_05940 NZ_JAVRJS010000002.1 Protein Homology CDS 487967 489052 . + 0 ID=cds-WP_259336263.1;Parent=gene-RM672_RS05945;Dbxref=GenBank:WP_259336263.1;Name=WP_259336263.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424330.1;locus_tag=RM672_RS05945;product=MFS transporter;protein_id=WP_259336263.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 489402 490478 . - . ID=gene-RM672_RS05950;Name=RM672_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05950;old_locus_tag=RM672_05945 NZ_JAVRJS010000002.1 Protein Homology CDS 489402 490478 . - 0 ID=cds-WP_311541333.1;Parent=gene-RM672_RS05950;Dbxref=GenBank:WP_311541333.1;Name=WP_311541333.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467887.1;locus_tag=RM672_RS05950;product=branched-chain amino acid aminotransferase;protein_id=WP_311541333.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 490748 491707 . - . ID=gene-RM672_RS05955;Name=RM672_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05955;old_locus_tag=RM672_05950 NZ_JAVRJS010000002.1 Protein Homology CDS 490748 491707 . - 0 ID=cds-WP_103158760.1;Parent=gene-RM672_RS05955;Dbxref=GenBank:WP_103158760.1;Name=WP_103158760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=RM672_RS05955;product=L-threonine 3-dehydrogenase;protein_id=WP_103158760.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 492017 493207 . - . ID=gene-RM672_RS05960;Name=RM672_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05960;old_locus_tag=RM672_05955 NZ_JAVRJS010000002.1 Protein Homology CDS 492017 493207 . - 0 ID=cds-WP_037572909.1;Parent=gene-RM672_RS05960;Dbxref=GenBank:WP_037572909.1;Name=WP_037572909.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=RM672_RS05960;product=glycine C-acetyltransferase;protein_id=WP_037572909.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 493316 494482 . + . ID=gene-RM672_RS05965;Name=RM672_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05965;old_locus_tag=RM672_05960 NZ_JAVRJS010000002.1 Protein Homology CDS 493316 494482 . + 0 ID=cds-WP_105962901.1;Parent=gene-RM672_RS05965;Dbxref=GenBank:WP_105962901.1;Name=WP_105962901.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383855.1;locus_tag=RM672_RS05965;product=amidohydrolase;protein_id=WP_105962901.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 495027 496214 . - . ID=gene-RM672_RS05970;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=RM672_RS05970;old_locus_tag=RM672_05965 NZ_JAVRJS010000002.1 Protein Homology CDS 495027 496214 . - 0 ID=cds-WP_037572915.1;Parent=gene-RM672_RS05970;Dbxref=GenBank:WP_037572915.1;Name=WP_037572915.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=RM672_RS05970;product=elongation factor Tu;protein_id=WP_037572915.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 496405 498486 . - . ID=gene-RM672_RS05975;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=RM672_RS05975;old_locus_tag=RM672_05970 NZ_JAVRJS010000002.1 Protein Homology CDS 496405 498486 . - 0 ID=cds-WP_037572918.1;Parent=gene-RM672_RS05975;Dbxref=GenBank:WP_037572918.1;Name=WP_037572918.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=RM672_RS05975;product=elongation factor G;protein_id=WP_037572918.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 498630 499100 . - . ID=gene-RM672_RS05980;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=RM672_RS05980;old_locus_tag=RM672_05975 NZ_JAVRJS010000002.1 Protein Homology CDS 498630 499100 . - 0 ID=cds-WP_014614746.1;Parent=gene-RM672_RS05980;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=RM672_RS05980;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 499183 499596 . - . ID=gene-RM672_RS05985;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=RM672_RS05985;old_locus_tag=RM672_05980 NZ_JAVRJS010000002.1 Protein Homology CDS 499183 499596 . - 0 ID=cds-WP_037572921.1;Parent=gene-RM672_RS05985;Dbxref=GenBank:WP_037572921.1;Name=WP_037572921.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=RM672_RS05985;product=30S ribosomal protein S12;protein_id=WP_037572921.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 499695 499949 . - . ID=gene-RM672_RS05990;Name=RM672_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS05990;old_locus_tag=RM672_05985 NZ_JAVRJS010000002.1 Protein Homology CDS 499695 499949 . - 0 ID=cds-WP_037572924.1;Parent=gene-RM672_RS05990;Dbxref=GenBank:WP_037572924.1;Name=WP_037572924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=RM672_RS05990;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_037572924.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 500087 503707 . - . ID=gene-RM672_RS05995;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=RM672_RS05995;old_locus_tag=RM672_05990 NZ_JAVRJS010000002.1 Protein Homology CDS 500087 503707 . - 0 ID=cds-WP_105996651.1;Parent=gene-RM672_RS05995;Dbxref=GenBank:WP_105996651.1;Name=WP_105996651.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=RM672_RS05995;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_105996651.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 503850 507401 . - . ID=gene-RM672_RS06000;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=RM672_RS06000;old_locus_tag=RM672_05995 NZ_JAVRJS010000002.1 Protein Homology CDS 503850 507401 . - 0 ID=cds-WP_037572930.1;Parent=gene-RM672_RS06000;Dbxref=GenBank:WP_037572930.1;Name=WP_037572930.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=RM672_RS06000;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_037572930.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 507613 508221 . - . ID=gene-RM672_RS06005;Name=RM672_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06005;old_locus_tag=RM672_06000 NZ_JAVRJS010000002.1 Protein Homology CDS 507613 508221 . - 0 ID=cds-WP_105965086.1;Parent=gene-RM672_RS06005;Dbxref=GenBank:WP_105965086.1;Name=WP_105965086.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449036.1;locus_tag=RM672_RS06005;product=class I SAM-dependent methyltransferase;protein_id=WP_105965086.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 508303 508668 . - . ID=gene-RM672_RS06010;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=RM672_RS06010;old_locus_tag=RM672_06005 NZ_JAVRJS010000002.1 Protein Homology CDS 508303 508668 . - 0 ID=cds-WP_037572937.1;Parent=gene-RM672_RS06010;Dbxref=GenBank:WP_037572937.1;Name=WP_037572937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=RM672_RS06010;product=50S ribosomal protein L7/L12;protein_id=WP_037572937.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 508723 509223 . - . ID=gene-RM672_RS06015;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=RM672_RS06015;old_locus_tag=RM672_06010 NZ_JAVRJS010000002.1 Protein Homology CDS 508723 509223 . - 0 ID=cds-WP_037572940.1;Parent=gene-RM672_RS06015;Dbxref=GenBank:WP_037572940.1;Name=WP_037572940.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=RM672_RS06015;product=50S ribosomal protein L10;protein_id=WP_037572940.1;transl_table=11 NZ_JAVRJS010000002.1 cmsearch sequence_feature 509269 509410 . - . ID=id-NZ_JAVRJS010000002.1:509269..509410;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00557,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000002.1 RefSeq gene 509526 510224 . - . ID=gene-RM672_RS06020;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=RM672_RS06020;old_locus_tag=RM672_06015 NZ_JAVRJS010000002.1 Protein Homology CDS 509526 510224 . - 0 ID=cds-WP_037572943.1;Parent=gene-RM672_RS06020;Dbxref=GenBank:WP_037572943.1;Name=WP_037572943.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=RM672_RS06020;product=50S ribosomal protein L1;protein_id=WP_037572943.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 510430 510852 . - . ID=gene-RM672_RS06025;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=RM672_RS06025;old_locus_tag=RM672_06020 NZ_JAVRJS010000002.1 Protein Homology CDS 510430 510852 . - 0 ID=cds-WP_037572949.1;Parent=gene-RM672_RS06025;Dbxref=GenBank:WP_037572949.1;Name=WP_037572949.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=RM672_RS06025;product=50S ribosomal protein L11;protein_id=WP_037572949.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 511394 511942 . - . ID=gene-RM672_RS06030;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=RM672_RS06030;old_locus_tag=RM672_06025 NZ_JAVRJS010000002.1 Protein Homology CDS 511394 511942 . - 0 ID=cds-WP_037572959.1;Parent=gene-RM672_RS06030;Dbxref=GenBank:WP_037572959.1;Name=WP_037572959.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=RM672_RS06030;product=transcription termination/antitermination protein NusG;protein_id=WP_037572959.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 511961 512140 . - . ID=gene-RM672_RS06035;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=RM672_RS06035;old_locus_tag=RM672_06030 NZ_JAVRJS010000002.1 Protein Homology CDS 511961 512140 . - 0 ID=cds-WP_037572962.1;Parent=gene-RM672_RS06035;Dbxref=GenBank:WP_037572962.1;Name=WP_037572962.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=RM672_RS06035;product=preprotein translocase subunit SecE;protein_id=WP_037572962.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 512227 512370 . - . ID=gene-RM672_RS06040;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM672_RS06040;old_locus_tag=RM672_06035 NZ_JAVRJS010000002.1 Protein Homology CDS 512227 512370 . - 0 ID=cds-WP_084275986.1;Parent=gene-RM672_RS06040;Dbxref=GenBank:WP_084275986.1;Name=WP_084275986.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR01023.1;locus_tag=RM672_RS06040;product=50S ribosomal protein L33;protein_id=WP_084275986.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 512450 513034 . - . ID=gene-RM672_RS06045;Name=RM672_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06045;old_locus_tag=RM672_06040 NZ_JAVRJS010000002.1 GeneMarkS-2+ CDS 512450 513034 . - 0 ID=cds-WP_037572965.1;Parent=gene-RM672_RS06045;Dbxref=GenBank:WP_037572965.1;Name=WP_037572965.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06045;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_037572965.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 513109 513633 . - . ID=gene-RM672_RS06050;Name=RM672_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06050;old_locus_tag=RM672_06045 NZ_JAVRJS010000002.1 Protein Homology CDS 513109 513633 . - 0 ID=cds-WP_105962897.1;Parent=gene-RM672_RS06050;Dbxref=GenBank:WP_105962897.1;Name=WP_105962897.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499087.1;locus_tag=RM672_RS06050;product=NYN domain-containing protein;protein_id=WP_105962897.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 513630 514385 . - . ID=gene-RM672_RS06055;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=RM672_RS06055;old_locus_tag=RM672_06050 NZ_JAVRJS010000002.1 Protein Homology CDS 513630 514385 . - 0 ID=cds-WP_311541334.1;Parent=gene-RM672_RS06055;Dbxref=GenBank:WP_311541334.1;Name=WP_311541334.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=RM672_RS06055;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_311541334.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 514392 514793 . - . ID=gene-RM672_RS06060;Name=RM672_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06060;old_locus_tag=RM672_06055 NZ_JAVRJS010000002.1 Protein Homology CDS 514392 514793 . - 0 ID=cds-WP_037572975.1;Parent=gene-RM672_RS06060;Dbxref=GenBank:WP_037572975.1;Name=WP_037572975.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=RM672_RS06060;product=Mini-ribonuclease 3;protein_id=WP_037572975.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 514786 516186 . - . ID=gene-RM672_RS06065;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=RM672_RS06065;old_locus_tag=RM672_06060 NZ_JAVRJS010000002.1 Protein Homology CDS 514786 516186 . - 0 ID=cds-WP_103158773.1;Parent=gene-RM672_RS06065;Dbxref=GenBank:WP_103158773.1;Name=WP_103158773.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=RM672_RS06065;product=cysteine--tRNA ligase;protein_id=WP_103158773.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 516170 516808 . - . ID=gene-RM672_RS06070;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=RM672_RS06070;old_locus_tag=RM672_06065 NZ_JAVRJS010000002.1 Protein Homology CDS 516170 516808 . - 0 ID=cds-WP_258026740.1;Parent=gene-RM672_RS06070;Dbxref=GenBank:WP_258026740.1;Name=WP_258026740.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638459.1;locus_tag=RM672_RS06070;product=serine O-acetyltransferase;protein_id=WP_258026740.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 517136 518590 . - . ID=gene-RM672_RS06075;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=RM672_RS06075;old_locus_tag=RM672_06070 NZ_JAVRJS010000002.1 Protein Homology CDS 517136 518590 . - 0 ID=cds-WP_037572983.1;Parent=gene-RM672_RS06075;Dbxref=GenBank:WP_037572983.1;Name=WP_037572983.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728607.1;locus_tag=RM672_RS06075;product=glutamate--tRNA ligase;protein_id=WP_037572983.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 518667 519146 . - . ID=gene-RM672_RS06080;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=RM672_RS06080;old_locus_tag=RM672_06075 NZ_JAVRJS010000002.1 Protein Homology CDS 518667 519146 . - 0 ID=cds-WP_037572986.1;Parent=gene-RM672_RS06080;Dbxref=GenBank:WP_037572986.1;Name=WP_037572986.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911171.1;locus_tag=RM672_RS06080;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_037572986.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 519139 519837 . - . ID=gene-RM672_RS06085;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=RM672_RS06085;old_locus_tag=RM672_06080 NZ_JAVRJS010000002.1 Protein Homology CDS 519139 519837 . - 0 ID=cds-WP_103158776.1;Parent=gene-RM672_RS06085;Dbxref=GenBank:WP_103158776.1;Name=WP_103158776.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=RM672_RS06085;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_103158776.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 519837 520901 . - . ID=gene-RM672_RS06090;Name=RM672_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06090;old_locus_tag=RM672_06085 NZ_JAVRJS010000002.1 Protein Homology CDS 519837 520901 . - 0 ID=cds-WP_103158777.1;Parent=gene-RM672_RS06090;Dbxref=GenBank:WP_103158777.1;Name=WP_103158777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276734.1;locus_tag=RM672_RS06090;product=PIN/TRAM domain-containing protein;protein_id=WP_103158777.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 520918 522291 . - . ID=gene-RM672_RS06095;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=RM672_RS06095;old_locus_tag=RM672_06090 NZ_JAVRJS010000002.1 Protein Homology CDS 520918 522291 . - 0 ID=cds-WP_037572997.1;Parent=gene-RM672_RS06095;Dbxref=GenBank:WP_037572997.1;Name=WP_037572997.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1;locus_tag=RM672_RS06095;product=DNA repair protein RadA;protein_id=WP_037572997.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 522418 524904 . - . ID=gene-RM672_RS06100;Name=RM672_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06100;old_locus_tag=RM672_06095 NZ_JAVRJS010000002.1 Protein Homology CDS 522418 524904 . - 0 ID=cds-WP_103158779.1;Parent=gene-RM672_RS06100;Dbxref=GenBank:WP_103158779.1;Name=WP_103158779.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169089.1;locus_tag=RM672_RS06100;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_103158779.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 524917 525921 . - . ID=gene-RM672_RS06105;Name=RM672_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06105;old_locus_tag=RM672_06100 NZ_JAVRJS010000002.1 Protein Homology CDS 524917 525921 . - 0 ID=cds-WP_105965079.1;Parent=gene-RM672_RS06105;Dbxref=GenBank:WP_105965079.1;Name=WP_105965079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424281.1;locus_tag=RM672_RS06105;product=protein arginine kinase;protein_id=WP_105965079.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 525905 526411 . - . ID=gene-RM672_RS06110;Name=RM672_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06110;old_locus_tag=RM672_06105 NZ_JAVRJS010000002.1 Protein Homology CDS 525905 526411 . - 0 ID=cds-WP_371874999.1;Parent=gene-RM672_RS06110;Dbxref=GenBank:WP_371874999.1;Name=WP_371874999.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424280.1;locus_tag=RM672_RS06110;product=UvrB/UvrC motif-containing protein;protein_id=WP_371874999.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 526456 526917 . - . ID=gene-RM672_RS06115;Name=RM672_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06115;old_locus_tag=RM672_06110 NZ_JAVRJS010000002.1 Protein Homology CDS 526456 526917 . - 0 ID=cds-WP_103158780.1;Parent=gene-RM672_RS06115;Dbxref=GenBank:WP_103158780.1;Name=WP_103158780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=RM672_RS06115;product=CtsR family transcriptional regulator;protein_id=WP_103158780.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 527082 528287 . + . ID=gene-RM672_RS06120;Name=RM672_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06120;old_locus_tag=RM672_06115 NZ_JAVRJS010000002.1 Protein Homology CDS 527082 528287 . + 0 ID=cds-WP_037573005.1;Parent=gene-RM672_RS06120;Dbxref=GenBank:WP_037573005.1;Name=WP_037573005.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=RM672_RS06120;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_037573005.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 528474 529034 . - . ID=gene-RM672_RS06125;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=RM672_RS06125;old_locus_tag=RM672_06120 NZ_JAVRJS010000002.1 Protein Homology CDS 528474 529034 . - 0 ID=cds-WP_119505256.1;Parent=gene-RM672_RS06125;Dbxref=GenBank:WP_119505256.1;Name=WP_119505256.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499073.1;locus_tag=RM672_RS06125;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_119505256.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 529036 529923 . - . ID=gene-RM672_RS06130;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=RM672_RS06130;old_locus_tag=RM672_06125 NZ_JAVRJS010000002.1 Protein Homology CDS 529036 529923 . - 0 ID=cds-WP_103158782.1;Parent=gene-RM672_RS06130;Dbxref=GenBank:WP_103158782.1;Name=WP_103158782.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=RM672_RS06130;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_103158782.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 530033 531448 . + . ID=gene-RM672_RS06135;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=RM672_RS06135;old_locus_tag=RM672_06130 NZ_JAVRJS010000002.1 Protein Homology CDS 530033 531448 . + 0 ID=cds-WP_051604943.1;Parent=gene-RM672_RS06135;Dbxref=GenBank:WP_051604943.1;Name=WP_051604943.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911182.1;locus_tag=RM672_RS06135;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_051604943.1;transl_table=11 NZ_JAVRJS010000002.1 RefSeq gene 531545 533488 . - . ID=gene-RM672_RS06140;Name=RM672_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06140;old_locus_tag=RM672_06135 NZ_JAVRJS010000002.1 Protein Homology CDS 531545 533488 . - 0 ID=cds-WP_229717265.1;Parent=gene-RM672_RS06140;Dbxref=GenBank:WP_229717265.1;Name=WP_229717265.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=RM672_RS06140;product=FUSC family protein;protein_id=WP_229717265.1;transl_table=11 ##sequence-region NZ_JAVRJS010000003.1 1 248290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000003.1 RefSeq region 1 248290 . + . ID=NZ_JAVRJS010000003.1:1..248290;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000003.1 RefSeq gene 1 804 . + . ID=gene-RM672_RS06145;Name=RM672_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06145;old_locus_tag=RM672_06140;partial=true;start_range=.,1 NZ_JAVRJS010000003.1 Protein Homology CDS 1 804 . + 0 ID=cds-WP_311542474.1;Parent=gene-RM672_RS06145;Dbxref=GenBank:WP_311542474.1;Name=WP_311542474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM672_RS06145;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311542474.1;start_range=.,1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 1032 2672 . + . ID=gene-RM672_RS06150;Name=RM672_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06150;old_locus_tag=RM672_06145 NZ_JAVRJS010000003.1 Protein Homology CDS 1032 2672 . + 0 ID=cds-WP_105963240.1;Parent=gene-RM672_RS06150;Dbxref=GenBank:WP_105963240.1;Name=WP_105963240.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813558.1;locus_tag=RM672_RS06150;product=alpha-keto acid decarboxylase family protein;protein_id=WP_105963240.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 3153 4556 . + . ID=gene-RM672_RS06155;Name=RM672_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06155;old_locus_tag=RM672_06150 NZ_JAVRJS010000003.1 Protein Homology CDS 3153 4556 . + 0 ID=cds-WP_103158686.1;Parent=gene-RM672_RS06155;Dbxref=GenBank:WP_103158686.1;Name=WP_103158686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=RM672_RS06155;product=anthranilate synthase component I;protein_id=WP_103158686.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 4553 5134 . + . ID=gene-RM672_RS06160;Name=RM672_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06160;old_locus_tag=RM672_06155 NZ_JAVRJS010000003.1 Protein Homology CDS 4553 5134 . + 0 ID=cds-WP_103158685.1;Parent=gene-RM672_RS06160;Dbxref=GenBank:WP_103158685.1;Name=WP_103158685.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=RM672_RS06160;product=anthranilate synthase component II;protein_id=WP_103158685.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 5121 6137 . + . ID=gene-RM672_RS06165;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=RM672_RS06165;old_locus_tag=RM672_06160 NZ_JAVRJS010000003.1 Protein Homology CDS 5121 6137 . + 0 ID=cds-WP_037575232.1;Parent=gene-RM672_RS06165;Dbxref=GenBank:WP_037575232.1;Name=WP_037575232.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275831.1;locus_tag=RM672_RS06165;product=anthranilate phosphoribosyltransferase;protein_id=WP_037575232.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 6121 6897 . + . ID=gene-RM672_RS06170;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=RM672_RS06170;old_locus_tag=RM672_06165 NZ_JAVRJS010000003.1 Protein Homology CDS 6121 6897 . + 0 ID=cds-WP_105963236.1;Parent=gene-RM672_RS06170;Dbxref=GenBank:WP_105963236.1;Name=WP_105963236.1;Ontology_term=GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433850.1;locus_tag=RM672_RS06170;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_105963236.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 6903 7532 . + . ID=gene-RM672_RS06175;Name=RM672_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06175;old_locus_tag=RM672_06170 NZ_JAVRJS010000003.1 Protein Homology CDS 6903 7532 . + 0 ID=cds-WP_105965468.1;Parent=gene-RM672_RS06175;Dbxref=GenBank:WP_105965468.1;Name=WP_105965468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=RM672_RS06175;product=phosphoribosylanthranilate isomerase;protein_id=WP_105965468.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 7529 8743 . + . ID=gene-RM672_RS06180;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=RM672_RS06180;old_locus_tag=RM672_06175 NZ_JAVRJS010000003.1 Protein Homology CDS 7529 8743 . + 0 ID=cds-WP_037575225.1;Parent=gene-RM672_RS06180;Dbxref=GenBank:WP_037575225.1;Name=WP_037575225.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507663.1;locus_tag=RM672_RS06180;product=tryptophan synthase subunit beta;protein_id=WP_037575225.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 8736 9473 . + . ID=gene-RM672_RS06185;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=RM672_RS06185;old_locus_tag=RM672_06180 NZ_JAVRJS010000003.1 Protein Homology CDS 8736 9473 . + 0 ID=cds-WP_105965469.1;Parent=gene-RM672_RS06185;Dbxref=GenBank:WP_105965469.1;Name=WP_105965469.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900267.1;locus_tag=RM672_RS06185;product=tryptophan synthase subunit alpha;protein_id=WP_105965469.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 9635 10342 . + . ID=gene-RM672_RS06190;Name=RM672_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06190;old_locus_tag=RM672_06185 NZ_JAVRJS010000003.1 Protein Homology CDS 9635 10342 . + 0 ID=cds-WP_105963232.1;Parent=gene-RM672_RS06190;Dbxref=GenBank:WP_105963232.1;Name=WP_105963232.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=RM672_RS06190;product=HAD family hydrolase;protein_id=WP_105963232.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 10817 11245 . - . ID=gene-RM672_RS06195;Name=RM672_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06195;old_locus_tag=RM672_06190 NZ_JAVRJS010000003.1 Protein Homology CDS 10817 11245 . - 0 ID=cds-WP_105965471.1;Parent=gene-RM672_RS06195;Dbxref=GenBank:WP_105965471.1;Name=WP_105965471.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=RM672_RS06195;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_105965471.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 11447 12052 . - . ID=gene-RM672_RS06200;Name=RM672_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06200;old_locus_tag=RM672_06195 NZ_JAVRJS010000003.1 Protein Homology CDS 11447 12052 . - 0 ID=cds-WP_037575216.1;Parent=gene-RM672_RS06200;Dbxref=GenBank:WP_037575216.1;Name=WP_037575216.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM672_RS06200;product=GNAT family N-acetyltransferase;protein_id=WP_037575216.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 12204 13982 . + . ID=gene-RM672_RS06205;Name=RM672_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06205;old_locus_tag=RM672_06200 NZ_JAVRJS010000003.1 Protein Homology CDS 12204 13982 . + 0 ID=cds-WP_103158679.1;Parent=gene-RM672_RS06205;Dbxref=GenBank:WP_103158679.1;Name=WP_103158679.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020008593.1;locus_tag=RM672_RS06205;product=ABC transporter ATP-binding protein;protein_id=WP_103158679.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 13979 15763 . + . ID=gene-RM672_RS06210;Name=RM672_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06210;old_locus_tag=RM672_06205 NZ_JAVRJS010000003.1 Protein Homology CDS 13979 15763 . + 0 ID=cds-WP_105965473.1;Parent=gene-RM672_RS06210;Dbxref=GenBank:WP_105965473.1;Name=WP_105965473.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548609.1;locus_tag=RM672_RS06210;product=ABC transporter ATP-binding protein;protein_id=WP_105965473.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 15860 16603 . - . ID=gene-RM672_RS06215;Name=RM672_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06215;old_locus_tag=RM672_06210 NZ_JAVRJS010000003.1 Protein Homology CDS 15860 16603 . - 0 ID=cds-WP_311541339.1;Parent=gene-RM672_RS06215;Dbxref=GenBank:WP_311541339.1;Name=WP_311541339.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF019359.7;locus_tag=RM672_RS06215;product=MerR family transcriptional regulator;protein_id=WP_311541339.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 16728 17099 . - . ID=gene-RM672_RS06220;Name=RM672_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06220;old_locus_tag=RM672_06215 NZ_JAVRJS010000003.1 Protein Homology CDS 16728 17099 . - 0 ID=cds-WP_037575204.1;Parent=gene-RM672_RS06220;Dbxref=GenBank:WP_037575204.1;Name=WP_037575204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166343.1;locus_tag=RM672_RS06220;product=VOC family protein;protein_id=WP_037575204.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 17148 17576 . - . ID=gene-RM672_RS06225;Name=RM672_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06225;old_locus_tag=RM672_06220 NZ_JAVRJS010000003.1 Protein Homology CDS 17148 17576 . - 0 ID=cds-WP_037575201.1;Parent=gene-RM672_RS06225;Dbxref=GenBank:WP_037575201.1;Name=WP_037575201.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=RM672_RS06225;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_037575201.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 18016 19407 . - . ID=gene-RM672_RS06230;Name=RM672_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06230;old_locus_tag=RM672_06225 NZ_JAVRJS010000003.1 Protein Homology CDS 18016 19407 . - 0 ID=cds-WP_037575198.1;Parent=gene-RM672_RS06230;Dbxref=GenBank:WP_037575198.1;Name=WP_037575198.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548016.1;locus_tag=RM672_RS06230;product=alanine/glycine:cation symporter family protein;protein_id=WP_037575198.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 19815 21773 . - . ID=gene-RM672_RS06235;Name=RM672_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06235;old_locus_tag=RM672_06230 NZ_JAVRJS010000003.1 Protein Homology CDS 19815 21773 . - 0 ID=cds-WP_105965474.1;Parent=gene-RM672_RS06235;Dbxref=GenBank:WP_105965474.1;Name=WP_105965474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426154.1;locus_tag=RM672_RS06235;product=fructose-1%2C6-bisphosphatase;protein_id=WP_105965474.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 22039 23232 . + . ID=gene-RM672_RS06240;Name=RM672_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06240;old_locus_tag=RM672_06235 NZ_JAVRJS010000003.1 Protein Homology CDS 22039 23232 . + 0 ID=cds-WP_103158676.1;Parent=gene-RM672_RS06240;Dbxref=GenBank:WP_103158676.1;Name=WP_103158676.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426155.1;locus_tag=RM672_RS06240;product=MFS transporter;protein_id=WP_103158676.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 23453 24739 . + . ID=gene-RM672_RS06245;Name=RM672_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06245;old_locus_tag=RM672_06240 NZ_JAVRJS010000003.1 Protein Homology CDS 23453 24739 . + 0 ID=cds-WP_103158675.1;Parent=gene-RM672_RS06245;Dbxref=GenBank:WP_103158675.1;Name=WP_103158675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501273.1;locus_tag=RM672_RS06245;product=pyruvate MFS transporter;protein_id=WP_103158675.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 25209 25808 . + . ID=gene-RM672_RS06250;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=RM672_RS06250;old_locus_tag=RM672_06245 NZ_JAVRJS010000003.1 Protein Homology CDS 25209 25808 . + 0 ID=cds-WP_037575184.1;Parent=gene-RM672_RS06250;Dbxref=GenBank:WP_037575184.1;Name=WP_037575184.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382165.1;locus_tag=RM672_RS06250;product=class A sortase SrtA;protein_id=WP_037575184.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 25887 27026 . + . ID=gene-RM672_RS06255;Name=RM672_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06255;old_locus_tag=RM672_06250 NZ_JAVRJS010000003.1 Protein Homology CDS 25887 27026 . + 0 ID=cds-WP_103158674.1;Parent=gene-RM672_RS06255;Dbxref=GenBank:WP_103158674.1;Name=WP_103158674.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501186.1;locus_tag=RM672_RS06255;product=glycerate kinase family protein;protein_id=WP_103158674.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 27094 27783 . - . ID=gene-RM672_RS06260;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=RM672_RS06260;old_locus_tag=RM672_06255 NZ_JAVRJS010000003.1 Protein Homology CDS 27094 27783 . - 0 ID=cds-WP_037575178.1;Parent=gene-RM672_RS06260;Dbxref=GenBank:WP_037575178.1;Name=WP_037575178.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899613.1;locus_tag=RM672_RS06260;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_037575178.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 28118 29209 . + . ID=gene-RM672_RS06265;Name=RM672_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06265;old_locus_tag=RM672_06260 NZ_JAVRJS010000003.1 Protein Homology CDS 28118 29209 . + 0 ID=cds-WP_311541340.1;Parent=gene-RM672_RS06265;Dbxref=GenBank:WP_311541340.1;Name=WP_311541340.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382232.1;locus_tag=RM672_RS06265;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_311541340.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 29430 30329 . + . ID=gene-RM672_RS06270;Name=RM672_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06270;old_locus_tag=RM672_06265 NZ_JAVRJS010000003.1 Protein Homology CDS 29430 30329 . + 0 ID=cds-WP_311542475.1;Parent=gene-RM672_RS06270;Dbxref=GenBank:WP_311542475.1;Name=WP_311542475.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219481.1;locus_tag=RM672_RS06270;product=PTS sugar transporter subunit IIC;protein_id=WP_311542475.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 30706 31470 . - . ID=gene-RM672_RS06275;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=RM672_RS06275;old_locus_tag=RM672_06270 NZ_JAVRJS010000003.1 Protein Homology CDS 30706 31470 . - 0 ID=cds-WP_233655017.1;Parent=gene-RM672_RS06275;Dbxref=GenBank:WP_233655017.1;Name=WP_233655017.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169535.1;locus_tag=RM672_RS06275;product=pyruvate formate-lyase-activating protein;protein_id=WP_233655017.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 31510 33759 . - . ID=gene-RM672_RS06280;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=RM672_RS06280;old_locus_tag=RM672_06275 NZ_JAVRJS010000003.1 Protein Homology CDS 31510 33759 . - 0 ID=cds-WP_103158671.1;Parent=gene-RM672_RS06280;Dbxref=GenBank:WP_103158671.1;Name=WP_103158671.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485526.1;locus_tag=RM672_RS06280;product=formate C-acetyltransferase;protein_id=WP_103158671.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 34095 34760 . + . ID=gene-RM672_RS06285;Name=RM672_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06285;old_locus_tag=RM672_06280 NZ_JAVRJS010000003.1 Protein Homology CDS 34095 34760 . + 0 ID=cds-WP_037575163.1;Parent=gene-RM672_RS06285;Dbxref=GenBank:WP_037575163.1;Name=WP_037575163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465343.1;locus_tag=RM672_RS06285;product=SDR family oxidoreductase;protein_id=WP_037575163.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 35043 36176 . + . ID=gene-RM672_RS06290;Name=RM672_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06290;old_locus_tag=RM672_06285 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 35043 36176 . + 0 ID=cds-WP_103158670.1;Parent=gene-RM672_RS06290;Dbxref=GenBank:WP_103158670.1;Name=WP_103158670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06290;product=Rho termination factor N-terminal domain-containing protein;protein_id=WP_103158670.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 36240 37646 . - . ID=gene-RM672_RS06295;Name=RM672_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06295;old_locus_tag=RM672_06290 NZ_JAVRJS010000003.1 Protein Homology CDS 36240 37646 . - 0 ID=cds-WP_103158669.1;Parent=gene-RM672_RS06295;Dbxref=GenBank:WP_103158669.1;Name=WP_103158669.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006639679.1;locus_tag=RM672_RS06295;product=PTS transporter subunit IIC;protein_id=WP_103158669.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 37672 37974 . - . ID=gene-RM672_RS06300;Name=RM672_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06300;old_locus_tag=RM672_06295 NZ_JAVRJS010000003.1 Protein Homology CDS 37672 37974 . - 0 ID=cds-WP_037575156.1;Parent=gene-RM672_RS06300;Dbxref=GenBank:WP_037575156.1;Name=WP_037575156.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018662696.1;locus_tag=RM672_RS06300;product=PTS sugar transporter subunit IIB;protein_id=WP_037575156.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 37994 38467 . - . ID=gene-RM672_RS06305;Name=RM672_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06305;old_locus_tag=RM672_06300 NZ_JAVRJS010000003.1 Protein Homology CDS 37994 38467 . - 0 ID=cds-WP_037575154.1;Parent=gene-RM672_RS06305;Dbxref=GenBank:WP_037575154.1;Name=WP_037575154.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM672_RS06305;product=PTS sugar transporter subunit IIA;protein_id=WP_037575154.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 38686 38973 . + . ID=gene-RM672_RS06310;Name=RM672_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06310;old_locus_tag=RM672_06305 NZ_JAVRJS010000003.1 Protein Homology CDS 38686 38973 . + 0 ID=cds-WP_133170497.1;Parent=gene-RM672_RS06310;Dbxref=GenBank:WP_133170497.1;Name=WP_133170497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166516.1;locus_tag=RM672_RS06310;product=hypothetical protein;protein_id=WP_133170497.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 39031 39930 . - . ID=gene-RM672_RS06315;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM672_RS06315;old_locus_tag=RM672_06310 NZ_JAVRJS010000003.1 Protein Homology CDS 39031 39930 . - 0 ID=cds-WP_037575152.1;Parent=gene-RM672_RS06315;Dbxref=GenBank:WP_037575152.1;Name=WP_037575152.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=RM672_RS06315;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_037575152.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 39946 40623 . - . ID=gene-RM672_RS06320;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM672_RS06320;old_locus_tag=RM672_06315 NZ_JAVRJS010000003.1 Protein Homology CDS 39946 40623 . - 0 ID=cds-WP_103158668.1;Parent=gene-RM672_RS06320;Dbxref=GenBank:WP_103158668.1;Name=WP_103158668.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384715.1;locus_tag=RM672_RS06320;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_103158668.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 40638 41669 . - . ID=gene-RM672_RS06325;Name=RM672_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06325;old_locus_tag=RM672_06320 NZ_JAVRJS010000003.1 Protein Homology CDS 40638 41669 . - 0 ID=cds-WP_037575148.1;Parent=gene-RM672_RS06325;Dbxref=GenBank:WP_037575148.1;Name=WP_037575148.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=RM672_RS06325;product=PTS sugar transporter subunit IIC;protein_id=WP_037575148.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 42073 42894 . + . ID=gene-RM672_RS06330;Name=RM672_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06330;old_locus_tag=RM672_06325 NZ_JAVRJS010000003.1 Protein Homology CDS 42073 42894 . + 0 ID=cds-WP_103158667.1;Parent=gene-RM672_RS06330;Dbxref=GenBank:WP_103158667.1;Name=WP_103158667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166521.1;locus_tag=RM672_RS06330;product=putative phosphoesterase;protein_id=WP_103158667.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 42928 44415 . - . ID=gene-RM672_RS06335;Name=RM672_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06335;old_locus_tag=RM672_06330 NZ_JAVRJS010000003.1 Protein Homology CDS 42928 44415 . - 0 ID=cds-WP_105963219.1;Parent=gene-RM672_RS06335;Dbxref=GenBank:WP_105963219.1;Name=WP_105963219.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=RM672_RS06335;product=aldehyde dehydrogenase family protein;protein_id=WP_105963219.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 45247 46257 . + . ID=gene-RM672_RS06340;Name=RM672_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06340;old_locus_tag=RM672_06335 NZ_JAVRJS010000003.1 Protein Homology CDS 45247 46257 . + 0 ID=cds-WP_103158665.1;Parent=gene-RM672_RS06340;Dbxref=GenBank:WP_103158665.1;Name=WP_103158665.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510696.1;locus_tag=RM672_RS06340;product=PTS sugar transporter subunit IIC;protein_id=WP_103158665.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 46286 47044 . + . ID=gene-RM672_RS06345;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=RM672_RS06345;old_locus_tag=RM672_06340 NZ_JAVRJS010000003.1 Protein Homology CDS 46286 47044 . + 0 ID=cds-WP_037575136.1;Parent=gene-RM672_RS06345;Dbxref=GenBank:WP_037575136.1;Name=WP_037575136.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012657353.1;locus_tag=RM672_RS06345;product=nicotinamide riboside transporter PnuC;protein_id=WP_037575136.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 47168 48694 . + . ID=gene-RM672_RS06350;Name=RM672_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06350;old_locus_tag=RM672_06345 NZ_JAVRJS010000003.1 Protein Homology CDS 47168 48694 . + 0 ID=cds-WP_037575132.1;Parent=gene-RM672_RS06350;Dbxref=GenBank:WP_037575132.1;Name=WP_037575132.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511671.1;locus_tag=RM672_RS06350;product=SLC13 family permease;protein_id=WP_037575132.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 48876 49055 . + . ID=gene-RM672_RS06355;Name=RM672_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06355;old_locus_tag=RM672_06350 NZ_JAVRJS010000003.1 Protein Homology CDS 48876 49055 . + 0 ID=cds-WP_037575130.1;Parent=gene-RM672_RS06355;Dbxref=GenBank:WP_037575130.1;Name=WP_037575130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384095.1;locus_tag=RM672_RS06355;product=hypothetical protein;protein_id=WP_037575130.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 49326 50144 . + . ID=gene-RM672_RS06360;Name=RM672_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06360;old_locus_tag=RM672_06355 NZ_JAVRJS010000003.1 Protein Homology CDS 49326 50144 . + 0 ID=cds-WP_311541342.1;Parent=gene-RM672_RS06360;Dbxref=GenBank:WP_311541342.1;Name=WP_311541342.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384094.1;locus_tag=RM672_RS06360;product=formate/nitrite transporter family protein;protein_id=WP_311541342.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 50241 50789 . + . ID=gene-RM672_RS06365;Name=RM672_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06365;old_locus_tag=RM672_06360 NZ_JAVRJS010000003.1 Protein Homology CDS 50241 50789 . + 0 ID=cds-WP_105996833.1;Parent=gene-RM672_RS06365;Dbxref=GenBank:WP_105996833.1;Name=WP_105996833.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166527.1;locus_tag=RM672_RS06365;product=GNAT family N-acetyltransferase;protein_id=WP_105996833.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 50912 51658 . + . ID=gene-RM672_RS06370;Name=RM672_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06370;old_locus_tag=RM672_06365 NZ_JAVRJS010000003.1 Protein Homology CDS 50912 51658 . + 0 ID=cds-WP_105996832.1;Parent=gene-RM672_RS06370;Dbxref=GenBank:WP_105996832.1;Name=WP_105996832.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219495.1;locus_tag=RM672_RS06370;product=sirohydrochlorin chelatase;protein_id=WP_105996832.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 51633 52094 . + . ID=gene-RM672_RS06375;Name=RM672_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06375;old_locus_tag=RM672_06370 NZ_JAVRJS010000003.1 Protein Homology CDS 51633 52094 . + 0 ID=cds-WP_037575117.1;Parent=gene-RM672_RS06375;Dbxref=GenBank:WP_037575117.1;Name=WP_037575117.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=RM672_RS06375;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_037575117.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 52087 54492 . + . ID=gene-RM672_RS06380;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=RM672_RS06380;old_locus_tag=RM672_06375 NZ_JAVRJS010000003.1 Protein Homology CDS 52087 54492 . + 0 ID=cds-WP_105963214.1;Parent=gene-RM672_RS06380;Dbxref=GenBank:WP_105963214.1;Name=WP_105963214.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=RM672_RS06380;product=nitrite reductase large subunit NirB;protein_id=WP_105963214.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 54495 54812 . + . ID=gene-RM672_RS06385;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=RM672_RS06385;old_locus_tag=RM672_06380 NZ_JAVRJS010000003.1 Protein Homology CDS 54495 54812 . + 0 ID=cds-WP_037575111.1;Parent=gene-RM672_RS06385;Dbxref=GenBank:WP_037575111.1;Name=WP_037575111.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=RM672_RS06385;product=nitrite reductase small subunit NirD;protein_id=WP_037575111.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 54803 55729 . + . ID=gene-RM672_RS06390;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM672_RS06390;old_locus_tag=RM672_06385 NZ_JAVRJS010000003.1 Protein Homology CDS 54803 55729 . + 0 ID=cds-WP_311541344.1;Parent=gene-RM672_RS06390;Dbxref=GenBank:WP_311541344.1;Name=WP_311541344.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169215.1;locus_tag=RM672_RS06390;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_311541344.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 55882 58386 . + . ID=gene-RM672_RS06395;Name=RM672_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06395;old_locus_tag=RM672_06390 NZ_JAVRJS010000003.1 Protein Homology CDS 55882 58386 . + 0 ID=cds-WP_311541345.1;Parent=gene-RM672_RS06395;Dbxref=GenBank:WP_311541345.1;Name=WP_311541345.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729601.1;locus_tag=RM672_RS06395;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_311541345.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 58686 62357 . + . ID=gene-RM672_RS06400;Name=RM672_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06400;old_locus_tag=RM672_06395 NZ_JAVRJS010000003.1 Protein Homology CDS 58686 62357 . + 0 ID=cds-WP_103158660.1;Parent=gene-RM672_RS06400;Dbxref=GenBank:WP_103158660.1;Name=WP_103158660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=RM672_RS06400;product=nitrate reductase subunit alpha;protein_id=WP_103158660.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 62347 63903 . + . ID=gene-RM672_RS06405;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=RM672_RS06405;old_locus_tag=RM672_06400 NZ_JAVRJS010000003.1 Protein Homology CDS 62347 63903 . + 0 ID=cds-WP_311541346.1;Parent=gene-RM672_RS06405;Dbxref=GenBank:WP_311541346.1;Name=WP_311541346.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=RM672_RS06405;product=nitrate reductase subunit beta;protein_id=WP_311541346.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 63896 64471 . + . ID=gene-RM672_RS06410;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=RM672_RS06410;old_locus_tag=RM672_06405 NZ_JAVRJS010000003.1 Protein Homology CDS 63896 64471 . + 0 ID=cds-WP_311541347.1;Parent=gene-RM672_RS06410;Dbxref=GenBank:WP_311541347.1;Name=WP_311541347.1;Ontology_term=GO:0051131;gbkey=CDS;gene=narJ;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=RM672_RS06410;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_311541347.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 64464 65141 . + . ID=gene-RM672_RS06415;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=RM672_RS06415;old_locus_tag=RM672_06410 NZ_JAVRJS010000003.1 Protein Homology CDS 64464 65141 . + 0 ID=cds-WP_037575096.1;Parent=gene-RM672_RS06415;Dbxref=GenBank:WP_037575096.1;Name=WP_037575096.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=RM672_RS06415;product=respiratory nitrate reductase subunit gamma;protein_id=WP_037575096.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 65158 65619 . + . ID=gene-RM672_RS06420;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=RM672_RS06420;old_locus_tag=RM672_06415 NZ_JAVRJS010000003.1 Protein Homology CDS 65158 65619 . + 0 ID=cds-WP_037575092.1;Parent=gene-RM672_RS06420;Dbxref=GenBank:WP_037575092.1;Name=WP_037575092.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426196.1;locus_tag=RM672_RS06420;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_037575092.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 65619 66662 . + . ID=gene-RM672_RS06425;Name=RM672_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06425;old_locus_tag=RM672_06420 NZ_JAVRJS010000003.1 Protein Homology CDS 65619 66662 . + 0 ID=cds-WP_037575089.1;Parent=gene-RM672_RS06425;Dbxref=GenBank:WP_037575089.1;Name=WP_037575089.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501138.1;locus_tag=RM672_RS06425;product=sensor histidine kinase;protein_id=WP_037575089.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 66680 67330 . + . ID=gene-RM672_RS06430;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=RM672_RS06430;old_locus_tag=RM672_06425 NZ_JAVRJS010000003.1 Protein Homology CDS 66680 67330 . + 0 ID=cds-WP_103158659.1;Parent=gene-RM672_RS06430;Dbxref=GenBank:WP_103158659.1;Name=WP_103158659.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=RM672_RS06430;product=nitrate respiration regulation response regulator NreC;protein_id=WP_103158659.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 67604 68767 . + . ID=gene-RM672_RS06435;Name=RM672_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06435;old_locus_tag=RM672_06430 NZ_JAVRJS010000003.1 Protein Homology CDS 67604 68767 . + 0 ID=cds-WP_037575083.1;Parent=gene-RM672_RS06435;Dbxref=GenBank:WP_037575083.1;Name=WP_037575083.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501133.1;locus_tag=RM672_RS06435;product=nitrate/nitrite transporter;protein_id=WP_037575083.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 68818 70422 . - . ID=gene-RM672_RS06440;Name=RM672_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06440;old_locus_tag=RM672_06435 NZ_JAVRJS010000003.1 Protein Homology CDS 68818 70422 . - 0 ID=cds-WP_311541348.1;Parent=gene-RM672_RS06440;Dbxref=GenBank:WP_311541348.1;Name=WP_311541348.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729598.1;locus_tag=RM672_RS06440;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_311541348.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 70612 70968 . + . ID=gene-RM672_RS06445;Name=RM672_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06445;old_locus_tag=RM672_06440 NZ_JAVRJS010000003.1 Protein Homology CDS 70612 70968 . + 0 ID=cds-WP_037575076.1;Parent=gene-RM672_RS06445;Dbxref=GenBank:WP_037575076.1;Name=WP_037575076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=RM672_RS06445;product=DUF3139 domain-containing protein;protein_id=WP_037575076.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 71130 72203 . + . ID=gene-RM672_RS06450;Name=RM672_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06450;old_locus_tag=RM672_06445 NZ_JAVRJS010000003.1 Protein Homology CDS 71130 72203 . + 0 ID=cds-WP_107366096.1;Parent=gene-RM672_RS06450;Dbxref=GenBank:WP_107366096.1;Name=WP_107366096.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=RM672_RS06450;product=M42 family metallopeptidase;protein_id=WP_107366096.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 72359 73261 . + . ID=gene-RM672_RS06455;Name=RM672_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06455;old_locus_tag=RM672_06450 NZ_JAVRJS010000003.1 Protein Homology CDS 72359 73261 . + 0 ID=cds-WP_105963207.1;Parent=gene-RM672_RS06455;Dbxref=GenBank:WP_105963207.1;Name=WP_105963207.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479716.1;locus_tag=RM672_RS06455;product=EamA family transporter;protein_id=WP_105963207.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 73500 73847 . - . ID=gene-RM672_RS06460;Name=RM672_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06460;old_locus_tag=RM672_06455 NZ_JAVRJS010000003.1 Protein Homology CDS 73500 73847 . - 0 ID=cds-WP_105996826.1;Parent=gene-RM672_RS06460;Dbxref=GenBank:WP_105996826.1;Name=WP_105996826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426206.1;locus_tag=RM672_RS06460;product=DUF4889 domain-containing protein;protein_id=WP_105996826.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 74043 74249 . + . ID=gene-RM672_RS06465;Name=RM672_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06465;old_locus_tag=RM672_06460 NZ_JAVRJS010000003.1 Protein Homology CDS 74043 74249 . + 0 ID=cds-WP_103158654.1;Parent=gene-RM672_RS06465;Dbxref=GenBank:WP_103158654.1;Name=WP_103158654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488219.1;locus_tag=RM672_RS06465;product=sterile alpha motif-like domain-containing protein;protein_id=WP_103158654.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 74413 75618 . + . ID=gene-RM672_RS06470;Name=RM672_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06470;old_locus_tag=RM672_06465 NZ_JAVRJS010000003.1 Protein Homology CDS 74413 75618 . + 0 ID=cds-WP_105996824.1;Parent=gene-RM672_RS06470;Dbxref=GenBank:WP_105996824.1;Name=WP_105996824.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=RM672_RS06470;product=CynX/NimT family MFS transporter;protein_id=WP_105996824.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 75679 76563 . - . ID=gene-RM672_RS06475;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=RM672_RS06475;old_locus_tag=RM672_06470 NZ_JAVRJS010000003.1 Protein Homology CDS 75679 76563 . - 0 ID=cds-WP_037575060.1;Parent=gene-RM672_RS06475;Dbxref=GenBank:WP_037575060.1;Name=WP_037575060.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444225.1;locus_tag=RM672_RS06475;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_037575060.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 76654 78774 . - . ID=gene-RM672_RS06480;Name=RM672_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06480;old_locus_tag=RM672_06475 NZ_JAVRJS010000003.1 Protein Homology CDS 76654 78774 . - 0 ID=cds-WP_037575057.1;Parent=gene-RM672_RS06480;Dbxref=GenBank:WP_037575057.1;Name=WP_037575057.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.7;locus_tag=RM672_RS06480;product=helix-turn-helix domain-containing protein;protein_id=WP_037575057.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 79353 80291 . - . ID=gene-RM672_RS06485;Name=RM672_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06485;old_locus_tag=RM672_06480 NZ_JAVRJS010000003.1 Protein Homology CDS 79353 80291 . - 0 ID=cds-WP_103159531.1;Parent=gene-RM672_RS06485;Dbxref=GenBank:WP_103159531.1;Name=WP_103159531.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=RM672_RS06485;product=magnesium transporter CorA family protein;protein_id=WP_103159531.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 80284 80751 . - . ID=gene-RM672_RS06490;Name=RM672_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06490;old_locus_tag=RM672_06485 NZ_JAVRJS010000003.1 Protein Homology CDS 80284 80751 . - 0 ID=cds-WP_103159530.1;Parent=gene-RM672_RS06490;Dbxref=GenBank:WP_103159530.1;Name=WP_103159530.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=RM672_RS06490;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_103159530.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 81038 82699 . + . ID=gene-RM672_RS06495;Name=RM672_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06495;old_locus_tag=RM672_06490 NZ_JAVRJS010000003.1 Protein Homology CDS 81038 82699 . + 0 ID=cds-WP_103159534.1;Parent=gene-RM672_RS06495;Dbxref=GenBank:WP_103159534.1;Name=WP_103159534.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498664.1;locus_tag=RM672_RS06495;product=Na/Pi cotransporter family protein;protein_id=WP_103159534.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 82834 84072 . + . ID=gene-RM672_RS06500;Name=RM672_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06500;old_locus_tag=RM672_06495 NZ_JAVRJS010000003.1 Protein Homology CDS 82834 84072 . + 0 ID=cds-WP_105996822.1;Parent=gene-RM672_RS06500;Dbxref=GenBank:WP_105996822.1;Name=WP_105996822.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: protein motif:HMM:NF016149.8;locus_tag=RM672_RS06500;product=copper resistance CopC/CopD family protein;protein_id=WP_105996822.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 84105 84716 . + . ID=gene-RM672_RS06505;Name=RM672_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06505;old_locus_tag=RM672_06500 NZ_JAVRJS010000003.1 Protein Homology CDS 84105 84716 . + 0 ID=cds-WP_037575261.1;Parent=gene-RM672_RS06505;Dbxref=GenBank:WP_037575261.1;Name=WP_037575261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168199.1;locus_tag=RM672_RS06505;product=YcnI family protein;protein_id=WP_037575261.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 84783 85232 . + . ID=gene-RM672_RS06510;Name=RM672_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06510;old_locus_tag=RM672_06505 NZ_JAVRJS010000003.1 Protein Homology CDS 84783 85232 . + 0 ID=cds-WP_037575041.1;Parent=gene-RM672_RS06510;Dbxref=GenBank:WP_037575041.1;Name=WP_037575041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426215.1;locus_tag=RM672_RS06510;product=DUF2871 domain-containing protein;protein_id=WP_037575041.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 85313 85729 . - . ID=gene-RM672_RS06515;Name=RM672_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06515;old_locus_tag=RM672_06510 NZ_JAVRJS010000003.1 Protein Homology CDS 85313 85729 . - 0 ID=cds-WP_103159528.1;Parent=gene-RM672_RS06515;Dbxref=GenBank:WP_103159528.1;Name=WP_103159528.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426216.1;locus_tag=RM672_RS06515;product=GNAT family N-acetyltransferase;protein_id=WP_103159528.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 85745 86773 . - . ID=gene-RM672_RS06520;Name=RM672_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06520;old_locus_tag=RM672_06515 NZ_JAVRJS010000003.1 Protein Homology CDS 85745 86773 . - 0 ID=cds-WP_037575037.1;Parent=gene-RM672_RS06520;Dbxref=GenBank:WP_037575037.1;Name=WP_037575037.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655970.1;locus_tag=RM672_RS06520;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037575037.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 86896 88230 . - . ID=gene-RM672_RS06525;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=RM672_RS06525;old_locus_tag=RM672_06520 NZ_JAVRJS010000003.1 Protein Homology CDS 86896 88230 . - 0 ID=cds-WP_105963200.1;Parent=gene-RM672_RS06525;Dbxref=GenBank:WP_105963200.1;Name=WP_105963200.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=RM672_RS06525;product=glucose transporter GlcP;protein_id=WP_105963200.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 88479 89468 . - . ID=gene-RM672_RS06530;Name=RM672_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06530;old_locus_tag=RM672_06525 NZ_JAVRJS010000003.1 Protein Homology CDS 88479 89468 . - 0 ID=cds-WP_105963199.1;Parent=gene-RM672_RS06530;Dbxref=GenBank:WP_105963199.1;Name=WP_105963199.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=RM672_RS06530;product=acrylyl-CoA reductase family protein;protein_id=WP_105963199.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 89590 90105 . + . ID=gene-RM672_RS06535;Name=RM672_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06535;old_locus_tag=RM672_06530 NZ_JAVRJS010000003.1 Protein Homology CDS 89590 90105 . + 0 ID=cds-WP_105963198.1;Parent=gene-RM672_RS06535;Dbxref=GenBank:WP_105963198.1;Name=WP_105963198.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168205.1;locus_tag=RM672_RS06535;product=GNAT family N-acetyltransferase;protein_id=WP_105963198.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 90185 90847 . + . ID=gene-RM672_RS06540;Name=RM672_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06540;old_locus_tag=RM672_06535 NZ_JAVRJS010000003.1 Protein Homology CDS 90185 90847 . + 0 ID=cds-WP_233655012.1;Parent=gene-RM672_RS06540;Dbxref=GenBank:WP_233655012.1;Name=WP_233655012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=RM672_RS06540;product=hypothetical protein;protein_id=WP_233655012.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 91198 92799 . + . ID=gene-RM672_RS06545;Name=RM672_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06545;old_locus_tag=RM672_06540 NZ_JAVRJS010000003.1 Protein Homology CDS 91198 92799 . + 0 ID=cds-WP_037575025.1;Parent=gene-RM672_RS06545;Dbxref=GenBank:WP_037575025.1;Name=WP_037575025.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426220.1;locus_tag=RM672_RS06545;product=L-lactate permease;protein_id=WP_037575025.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 92943 94106 . - . ID=gene-RM672_RS06550;Name=RM672_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06550;old_locus_tag=RM672_06545 NZ_JAVRJS010000003.1 Protein Homology CDS 92943 94106 . - 0 ID=cds-WP_311541350.1;Parent=gene-RM672_RS06550;Dbxref=GenBank:WP_311541350.1;Name=WP_311541350.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=RM672_RS06550;product=glycosyltransferase family 4 protein;protein_id=WP_311541350.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 94453 95955 . + . ID=gene-RM672_RS06555;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=RM672_RS06555;old_locus_tag=RM672_06550 NZ_JAVRJS010000003.1 Protein Homology CDS 94453 95955 . + 0 ID=cds-WP_311541351.1;Parent=gene-RM672_RS06555;Dbxref=GenBank:WP_311541351.1;Name=WP_311541351.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=RM672_RS06555;product=malate dehydrogenase (quinone);protein_id=WP_311541351.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 96052 97425 . - . ID=gene-RM672_RS06560;Name=RM672_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06560;old_locus_tag=RM672_06555 NZ_JAVRJS010000003.1 Protein Homology CDS 96052 97425 . - 0 ID=cds-WP_311541352.1;Parent=gene-RM672_RS06560;Dbxref=GenBank:WP_311541352.1;Name=WP_311541352.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275021.1;locus_tag=RM672_RS06560;product=sensor histidine kinase;protein_id=WP_311541352.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 97418 98095 . - . ID=gene-RM672_RS06565;Name=RM672_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06565;old_locus_tag=RM672_06560 NZ_JAVRJS010000003.1 Protein Homology CDS 97418 98095 . - 0 ID=cds-WP_311541353.1;Parent=gene-RM672_RS06565;Dbxref=GenBank:WP_311541353.1;Name=WP_311541353.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=RM672_RS06565;product=response regulator transcription factor;protein_id=WP_311541353.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 98287 99348 . + . ID=gene-RM672_RS06570;Name=RM672_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06570;old_locus_tag=RM672_06565 NZ_JAVRJS010000003.1 Protein Homology CDS 98287 99348 . + 0 ID=cds-WP_311541354.1;Parent=gene-RM672_RS06570;Dbxref=GenBank:WP_311541354.1;Name=WP_311541354.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176794.1;locus_tag=RM672_RS06570;product=ABC transporter permease;protein_id=WP_311541354.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 99348 100022 . + . ID=gene-RM672_RS06575;Name=RM672_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06575;old_locus_tag=RM672_06570 NZ_JAVRJS010000003.1 Protein Homology CDS 99348 100022 . + 0 ID=cds-WP_037575014.1;Parent=gene-RM672_RS06575;Dbxref=GenBank:WP_037575014.1;Name=WP_037575014.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426229.1;locus_tag=RM672_RS06575;product=ABC transporter ATP-binding protein;protein_id=WP_037575014.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 100077 101609 . - . ID=gene-RM672_RS06580;Name=RM672_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06580;old_locus_tag=RM672_06575 NZ_JAVRJS010000003.1 Protein Homology CDS 100077 101609 . - 0 ID=cds-WP_311541355.1;Parent=gene-RM672_RS06580;Dbxref=GenBank:WP_311541355.1;Name=WP_311541355.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165510.1;locus_tag=RM672_RS06580;product=AbgT family transporter;protein_id=WP_311541355.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 101685 102386 . - . ID=gene-RM672_RS06585;Name=RM672_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06585;old_locus_tag=RM672_06580 NZ_JAVRJS010000003.1 Protein Homology CDS 101685 102386 . - 0 ID=cds-WP_311541357.1;Parent=gene-RM672_RS06585;Dbxref=GenBank:WP_311541357.1;Name=WP_311541357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014724.7;locus_tag=RM672_RS06585;product=YdcF family protein;protein_id=WP_311541357.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 102861 103259 . + . ID=gene-RM672_RS06590;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=RM672_RS06590;old_locus_tag=RM672_06585 NZ_JAVRJS010000003.1 Protein Homology CDS 102861 103259 . + 0 ID=cds-WP_311542476.1;Parent=gene-RM672_RS06590;Dbxref=GenBank:WP_311542476.1;Name=WP_311542476.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426231.1;locus_tag=RM672_RS06590;product=MarR family transcriptional regulator TcaR;protein_id=WP_311542476.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 103435 104829 . + . ID=gene-RM672_RS06595;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=RM672_RS06595;old_locus_tag=RM672_06590 NZ_JAVRJS010000003.1 Protein Homology CDS 103435 104829 . + 0 ID=cds-WP_311542477.1;Parent=gene-RM672_RS06595;Dbxref=GenBank:WP_311542477.1;Name=WP_311542477.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=RM672_RS06595;product=membrane-associated protein TcaA;protein_id=WP_311542477.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 105165 105713 . + . ID=gene-RM672_RS06600;Name=RM672_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06600;old_locus_tag=RM672_06595 NZ_JAVRJS010000003.1 Protein Homology CDS 105165 105713 . + 0 ID=cds-WP_311541379.1;Parent=gene-RM672_RS06600;Dbxref=GenBank:WP_311541379.1;Name=WP_311541379.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM672_RS06600;product=TetR/AcrR family transcriptional regulator;protein_id=WP_311541379.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 106293 106916 . - . ID=gene-RM672_RS06605;Name=RM672_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06605;old_locus_tag=RM672_06600 NZ_JAVRJS010000003.1 Protein Homology CDS 106293 106916 . - 0 ID=cds-WP_311541361.1;Parent=gene-RM672_RS06605;Dbxref=GenBank:WP_311541361.1;Name=WP_311541361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426235.1;locus_tag=RM672_RS06605;product=hypothetical protein;protein_id=WP_311541361.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 107031 107360 . + . ID=gene-RM672_RS06610;Name=RM672_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06610;old_locus_tag=RM672_06605 NZ_JAVRJS010000003.1 Protein Homology CDS 107031 107360 . + 0 ID=cds-WP_037575002.1;Parent=gene-RM672_RS06610;Dbxref=GenBank:WP_037575002.1;Name=WP_037575002.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470023.1;locus_tag=RM672_RS06610;product=thioredoxin family protein;protein_id=WP_037575002.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 107414 108319 . + . ID=gene-RM672_RS06615;Name=RM672_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06615;old_locus_tag=RM672_06610 NZ_JAVRJS010000003.1 Protein Homology CDS 107414 108319 . + 0 ID=cds-WP_037575000.1;Parent=gene-RM672_RS06615;Dbxref=GenBank:WP_037575000.1;Name=WP_037575000.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426237.1;locus_tag=RM672_RS06615;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_037575000.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq pseudogene 108638 108736 . - . ID=gene-RM672_RS06620;Name=RM672_RS06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS06620;old_locus_tag=RM672_06615;partial=true;pseudo=true;start_range=.,108638 NZ_JAVRJS010000003.1 Protein Homology CDS 108638 108736 . - 0 ID=cds-RM672_RS06620;Parent=gene-RM672_RS06620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=RM672_RS06620;partial=true;product=hypothetical protein;pseudo=true;start_range=.,108638;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 108690 109676 . + . ID=gene-RM672_RS06625;Name=RM672_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06625;old_locus_tag=RM672_06620 NZ_JAVRJS010000003.1 Protein Homology CDS 108690 109676 . + 0 ID=cds-WP_229717311.1;Parent=gene-RM672_RS06625;Dbxref=GenBank:WP_229717311.1;Name=WP_229717311.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=RM672_RS06625;product=PTS sugar transporter subunit IIC;protein_id=WP_229717311.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 109714 110190 . - . ID=gene-RM672_RS06630;Name=RM672_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06630;old_locus_tag=RM672_06625 NZ_JAVRJS010000003.1 Protein Homology CDS 109714 110190 . - 0 ID=cds-WP_105986260.1;Parent=gene-RM672_RS06630;Dbxref=GenBank:WP_105986260.1;Name=WP_105986260.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426239.1;locus_tag=RM672_RS06630;product=thioesterase family protein;protein_id=WP_105986260.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 110317 111351 . + . ID=gene-RM672_RS06635;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=RM672_RS06635;old_locus_tag=RM672_06630 NZ_JAVRJS010000003.1 Protein Homology CDS 110317 111351 . + 0 ID=cds-WP_311541362.1;Parent=gene-RM672_RS06635;Dbxref=GenBank:WP_311541362.1;Name=WP_311541362.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=RM672_RS06635;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_311541362.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 111489 112691 . + . ID=gene-RM672_RS06640;Name=RM672_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06640;old_locus_tag=RM672_06635 NZ_JAVRJS010000003.1 Protein Homology CDS 111489 112691 . + 0 ID=cds-WP_037574994.1;Parent=gene-RM672_RS06640;Dbxref=GenBank:WP_037574994.1;Name=WP_037574994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477446.1;locus_tag=RM672_RS06640;product=GTP-binding protein;protein_id=WP_037574994.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 112816 114027 . - . ID=gene-RM672_RS06645;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=RM672_RS06645;old_locus_tag=RM672_06640 NZ_JAVRJS010000003.1 Protein Homology CDS 112816 114027 . - 0 ID=cds-WP_037574992.1;Parent=gene-RM672_RS06645;Dbxref=GenBank:WP_037574992.1;Name=WP_037574992.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=RM672_RS06645;product=sodium/glutamate symporter;protein_id=WP_037574992.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 114181 115005 . - . ID=gene-RM672_RS06650;Name=RM672_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06650;old_locus_tag=RM672_06645 NZ_JAVRJS010000003.1 Protein Homology CDS 114181 115005 . - 0 ID=cds-WP_119505277.1;Parent=gene-RM672_RS06650;Dbxref=GenBank:WP_119505277.1;Name=WP_119505277.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169591.1;locus_tag=RM672_RS06650;product=AraC family transcriptional regulator;protein_id=WP_119505277.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 115140 115961 . + . ID=gene-RM672_RS06655;Name=RM672_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06655;old_locus_tag=RM672_06650 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 115140 115961 . + 0 ID=cds-WP_103158960.1;Parent=gene-RM672_RS06655;Dbxref=GenBank:WP_103158960.1;Name=WP_103158960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06655;product=hypothetical protein;protein_id=WP_103158960.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 116125 117447 . + . ID=gene-RM672_RS06660;Name=RM672_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06660;old_locus_tag=RM672_06655 NZ_JAVRJS010000003.1 Protein Homology CDS 116125 117447 . + 0 ID=cds-WP_037574985.1;Parent=gene-RM672_RS06660;Dbxref=GenBank:WP_037574985.1;Name=WP_037574985.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426251.1;locus_tag=RM672_RS06660;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_037574985.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 117522 118130 . - . ID=gene-RM672_RS06665;Name=RM672_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06665;old_locus_tag=RM672_06660 NZ_JAVRJS010000003.1 Protein Homology CDS 117522 118130 . - 0 ID=cds-WP_037574983.1;Parent=gene-RM672_RS06665;Dbxref=GenBank:WP_037574983.1;Name=WP_037574983.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451953.1;locus_tag=RM672_RS06665;product=DNA-3-methyladenine glycosylase;protein_id=WP_037574983.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 118324 118917 . + . ID=gene-RM672_RS06670;Name=RM672_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06670;old_locus_tag=RM672_06665 NZ_JAVRJS010000003.1 Protein Homology CDS 118324 118917 . + 0 ID=cds-WP_069191683.1;Parent=gene-RM672_RS06670;Dbxref=GenBank:WP_069191683.1;Name=WP_069191683.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426253.1;locus_tag=RM672_RS06670;product=DUF805 domain-containing protein;protein_id=WP_069191683.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 119165 120064 . + . ID=gene-RM672_RS06675;Name=RM672_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06675;old_locus_tag=RM672_06670 NZ_JAVRJS010000003.1 Protein Homology CDS 119165 120064 . + 0 ID=cds-WP_037574981.1;Parent=gene-RM672_RS06675;Dbxref=GenBank:WP_037574981.1;Name=WP_037574981.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636490.1;locus_tag=RM672_RS06675;product=ABC transporter ATP-binding protein;protein_id=WP_037574981.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 120057 121292 . + . ID=gene-RM672_RS06680;Name=RM672_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06680;old_locus_tag=RM672_06675 NZ_JAVRJS010000003.1 Protein Homology CDS 120057 121292 . + 0 ID=cds-WP_037574978.1;Parent=gene-RM672_RS06680;Dbxref=GenBank:WP_037574978.1;Name=WP_037574978.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=RM672_RS06680;product=ABC transporter permease;protein_id=WP_037574978.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 121411 121743 . + . ID=gene-RM672_RS06685;Name=RM672_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06685;old_locus_tag=RM672_06680 NZ_JAVRJS010000003.1 Protein Homology CDS 121411 121743 . + 0 ID=cds-WP_107366077.1;Parent=gene-RM672_RS06685;Dbxref=GenBank:WP_107366077.1;Name=WP_107366077.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=RM672_RS06685;product=YnfA family protein;protein_id=WP_107366077.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 121899 122108 . + . ID=gene-RM672_RS06690;Name=RM672_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06690;old_locus_tag=RM672_06685 NZ_JAVRJS010000003.1 Protein Homology CDS 121899 122108 . + 0 ID=cds-WP_037574974.1;Parent=gene-RM672_RS06690;Dbxref=GenBank:WP_037574974.1;Name=WP_037574974.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479678.1;locus_tag=RM672_RS06690;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574974.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 122181 122648 . - . ID=gene-RM672_RS06695;Name=RM672_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06695;old_locus_tag=RM672_06690 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 122181 122648 . - 0 ID=cds-WP_037574972.1;Parent=gene-RM672_RS06695;Dbxref=GenBank:WP_037574972.1;Name=WP_037574972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06695;product=SRPBCC family protein;protein_id=WP_037574972.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 122666 123325 . - . ID=gene-RM672_RS06700;Name=RM672_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06700;old_locus_tag=RM672_06695 NZ_JAVRJS010000003.1 Protein Homology CDS 122666 123325 . - 0 ID=cds-WP_105965505.1;Parent=gene-RM672_RS06700;Dbxref=GenBank:WP_105965505.1;Name=WP_105965505.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169604.1;locus_tag=RM672_RS06700;product=MOSC domain-containing protein;protein_id=WP_105965505.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 123458 124147 . + . ID=gene-RM672_RS06705;Name=RM672_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06705;old_locus_tag=RM672_06700 NZ_JAVRJS010000003.1 Protein Homology CDS 123458 124147 . + 0 ID=cds-WP_037574967.1;Parent=gene-RM672_RS06705;Dbxref=GenBank:WP_037574967.1;Name=WP_037574967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=RM672_RS06705;product=ribose 5-phosphate isomerase A;protein_id=WP_037574967.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 124188 125240 . - . ID=gene-RM672_RS06710;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=RM672_RS06710;old_locus_tag=RM672_06705 NZ_JAVRJS010000003.1 Protein Homology CDS 124188 125240 . - 0 ID=cds-WP_107363524.1;Parent=gene-RM672_RS06710;Dbxref=GenBank:WP_107363524.1;Name=WP_107363524.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636483.1;locus_tag=RM672_RS06710;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_107363524.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 125500 126429 . + . ID=gene-RM672_RS06715;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=RM672_RS06715;old_locus_tag=RM672_06710 NZ_JAVRJS010000003.1 Protein Homology CDS 125500 126429 . + 0 ID=cds-WP_311541363.1;Parent=gene-RM672_RS06715;Dbxref=GenBank:WP_311541363.1;Name=WP_311541363.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=RM672_RS06715;product=formimidoylglutamase;protein_id=WP_311541363.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 126492 127370 . - . ID=gene-RM672_RS06720;Name=RM672_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06720;old_locus_tag=RM672_06715 NZ_JAVRJS010000003.1 Protein Homology CDS 126492 127370 . - 0 ID=cds-WP_037574963.1;Parent=gene-RM672_RS06720;Dbxref=GenBank:WP_037574963.1;Name=WP_037574963.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382899.1;locus_tag=RM672_RS06720;product=LysR family transcriptional regulator;protein_id=WP_037574963.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 127678 128952 . + . ID=gene-RM672_RS06725;Name=RM672_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06725;old_locus_tag=RM672_06720 NZ_JAVRJS010000003.1 Protein Homology CDS 127678 128952 . + 0 ID=cds-WP_371874987.1;Parent=gene-RM672_RS06725;Dbxref=GenBank:WP_371874987.1;Name=WP_371874987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=RM672_RS06725;product=YjiH family protein;protein_id=WP_371874987.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 128971 130638 . + . ID=gene-RM672_RS06730;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=RM672_RS06730;old_locus_tag=RM672_06725 NZ_JAVRJS010000003.1 Protein Homology CDS 128971 130638 . + 0 ID=cds-WP_037574959.1;Parent=gene-RM672_RS06730;Dbxref=GenBank:WP_037574959.1;Name=WP_037574959.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911396.1;locus_tag=RM672_RS06730;product=urocanate hydratase;protein_id=WP_037574959.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 130638 131870 . + . ID=gene-RM672_RS06735;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=RM672_RS06735;old_locus_tag=RM672_06730 NZ_JAVRJS010000003.1 Protein Homology CDS 130638 131870 . + 0 ID=cds-WP_105996813.1;Parent=gene-RM672_RS06735;Dbxref=GenBank:WP_105996813.1;Name=WP_105996813.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468897.1;locus_tag=RM672_RS06735;product=imidazolonepropionase;protein_id=WP_105996813.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 132087 133223 . + . ID=gene-RM672_RS06740;Name=RM672_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06740;old_locus_tag=RM672_06735 NZ_JAVRJS010000003.1 Protein Homology CDS 132087 133223 . + 0 ID=cds-WP_311541364.1;Parent=gene-RM672_RS06740;Dbxref=GenBank:WP_311541364.1;Name=WP_311541364.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506876.1;locus_tag=RM672_RS06740;product=SulP family inorganic anion transporter;protein_id=WP_311541364.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 133233 134363 . + . ID=gene-RM672_RS06745;Name=RM672_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06745;old_locus_tag=RM672_06740 NZ_JAVRJS010000003.1 Protein Homology CDS 133233 134363 . + 0 ID=cds-WP_311541366.1;Parent=gene-RM672_RS06745;Dbxref=GenBank:WP_311541366.1;Name=WP_311541366.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471844.1;locus_tag=RM672_RS06745;product=amidohydrolase;protein_id=WP_311541366.1;transl_table=11 NZ_JAVRJS010000003.1 cmsearch riboswitch 134409 134506 . + . ID=id-NZ_JAVRJS010000003.1:134409..134506;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000003.1 RefSeq gene 134597 135907 . + . ID=gene-RM672_RS06750;Name=RM672_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06750;old_locus_tag=RM672_06745 NZ_JAVRJS010000003.1 Protein Homology CDS 134597 135907 . + 0 ID=cds-WP_037574953.1;Parent=gene-RM672_RS06750;Dbxref=GenBank:WP_037574953.1;Name=WP_037574953.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460143.1;locus_tag=RM672_RS06750;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_037574953.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 136021 136518 . + . ID=gene-RM672_RS06755;Name=RM672_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06755;old_locus_tag=RM672_06750 NZ_JAVRJS010000003.1 Protein Homology CDS 136021 136518 . + 0 ID=cds-WP_037574951.1;Parent=gene-RM672_RS06755;Dbxref=GenBank:WP_037574951.1;Name=WP_037574951.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613136.1;locus_tag=RM672_RS06755;product=SRPBCC family protein;protein_id=WP_037574951.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 136683 137213 . - . ID=gene-RM672_RS06760;Name=RM672_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06760;old_locus_tag=RM672_06755 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 136683 137213 . - 0 ID=cds-WP_037574949.1;Parent=gene-RM672_RS06760;Dbxref=GenBank:WP_037574949.1;Name=WP_037574949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06760;product=hypothetical protein;protein_id=WP_037574949.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 137394 138341 . + . ID=gene-RM672_RS06765;Name=RM672_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06765;old_locus_tag=RM672_06760 NZ_JAVRJS010000003.1 Protein Homology CDS 137394 138341 . + 0 ID=cds-WP_037574947.1;Parent=gene-RM672_RS06765;Dbxref=GenBank:WP_037574947.1;Name=WP_037574947.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912301.1;locus_tag=RM672_RS06765;product=bile acid:sodium symporter family protein;protein_id=WP_037574947.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 138652 138921 . + . ID=gene-RM672_RS06770;Name=RM672_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06770;old_locus_tag=RM672_06765 NZ_JAVRJS010000003.1 Protein Homology CDS 138652 138921 . + 0 ID=cds-WP_037574945.1;Parent=gene-RM672_RS06770;Dbxref=GenBank:WP_037574945.1;Name=WP_037574945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=RM672_RS06770;product=hypothetical protein;protein_id=WP_037574945.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 138993 139823 . + . ID=gene-RM672_RS06775;Name=RM672_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06775;old_locus_tag=RM672_06770 NZ_JAVRJS010000003.1 Protein Homology CDS 138993 139823 . + 0 ID=cds-WP_107360550.1;Parent=gene-RM672_RS06775;Dbxref=GenBank:WP_107360550.1;Name=WP_107360550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=RM672_RS06775;product=VOC family protein;protein_id=WP_107360550.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 139886 140530 . + . ID=gene-RM672_RS06780;Name=RM672_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06780;old_locus_tag=RM672_06775 NZ_JAVRJS010000003.1 Protein Homology CDS 139886 140530 . + 0 ID=cds-WP_311541367.1;Parent=gene-RM672_RS06780;Dbxref=GenBank:WP_311541367.1;Name=WP_311541367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=RM672_RS06780;product=HAD family hydrolase;protein_id=WP_311541367.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 140527 140718 . + . ID=gene-RM672_RS06785;Name=RM672_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06785;old_locus_tag=RM672_06780 NZ_JAVRJS010000003.1 Protein Homology CDS 140527 140718 . + 0 ID=cds-WP_037574938.1;Parent=gene-RM672_RS06785;Dbxref=GenBank:WP_037574938.1;Name=WP_037574938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=RM672_RS06785;product=hypothetical protein;protein_id=WP_037574938.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 140822 141004 . - . ID=gene-RM672_RS06790;Name=RM672_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06790;old_locus_tag=RM672_06785 NZ_JAVRJS010000003.1 Protein Homology CDS 140822 141004 . - 0 ID=cds-WP_037574936.1;Parent=gene-RM672_RS06790;Dbxref=GenBank:WP_037574936.1;Name=WP_037574936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=RM672_RS06790;product=hypothetical protein;protein_id=WP_037574936.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 141007 141345 . - . ID=gene-RM672_RS06795;Name=RM672_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06795;old_locus_tag=RM672_06790 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 141007 141345 . - 0 ID=cds-WP_105963173.1;Parent=gene-RM672_RS06795;Dbxref=GenBank:WP_105963173.1;Name=WP_105963173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06795;product=hypothetical protein;protein_id=WP_105963173.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 141402 142229 . - . ID=gene-RM672_RS06800;Name=RM672_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06800;old_locus_tag=RM672_06795 NZ_JAVRJS010000003.1 Protein Homology CDS 141402 142229 . - 0 ID=cds-WP_311541368.1;Parent=gene-RM672_RS06800;Dbxref=GenBank:WP_311541368.1;Name=WP_311541368.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=RM672_RS06800;product=formate/nitrite transporter family protein;protein_id=WP_311541368.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 142560 143951 . + . ID=gene-RM672_RS06805;Name=RM672_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06805;old_locus_tag=RM672_06800 NZ_JAVRJS010000003.1 Protein Homology CDS 142560 143951 . + 0 ID=cds-WP_105963171.1;Parent=gene-RM672_RS06805;Dbxref=GenBank:WP_105963171.1;Name=WP_105963171.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=RM672_RS06805;product=amino acid permease;protein_id=WP_105963171.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 144203 145612 . - . ID=gene-RM672_RS06810;Name=RM672_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06810;old_locus_tag=RM672_06805 NZ_JAVRJS010000003.1 Protein Homology CDS 144203 145612 . - 0 ID=cds-WP_107377380.1;Parent=gene-RM672_RS06810;Dbxref=GenBank:WP_107377380.1;Name=WP_107377380.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432328.1;locus_tag=RM672_RS06810;product=PTS transporter subunit EIIC;protein_id=WP_107377380.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 145629 146516 . - . ID=gene-RM672_RS06815;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=RM672_RS06815;old_locus_tag=RM672_06810 NZ_JAVRJS010000003.1 Protein Homology CDS 145629 146516 . - 0 ID=cds-WP_037574924.1;Parent=gene-RM672_RS06815;Dbxref=GenBank:WP_037574924.1;Name=WP_037574924.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510093.1;locus_tag=RM672_RS06815;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_037574924.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 146497 147564 . - . ID=gene-RM672_RS06820;Name=RM672_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06820;old_locus_tag=RM672_06815 NZ_JAVRJS010000003.1 Protein Homology CDS 146497 147564 . - 0 ID=cds-WP_311541370.1;Parent=gene-RM672_RS06820;Dbxref=GenBank:WP_311541370.1;Name=WP_311541370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039260.6;locus_tag=RM672_RS06820;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_311541370.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 147648 147980 . - . ID=gene-RM672_RS06825;Name=RM672_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06825;old_locus_tag=RM672_06820 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 147648 147980 . - 0 ID=cds-WP_107358474.1;Parent=gene-RM672_RS06825;Dbxref=GenBank:WP_107358474.1;Name=WP_107358474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS06825;product=hypothetical protein;protein_id=WP_107358474.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 148072 148803 . + . ID=gene-RM672_RS06830;Name=RM672_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06830;old_locus_tag=RM672_06825 NZ_JAVRJS010000003.1 Protein Homology CDS 148072 148803 . + 0 ID=cds-WP_233649461.1;Parent=gene-RM672_RS06830;Dbxref=GenBank:WP_233649461.1;Name=WP_233649461.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426283.1;locus_tag=RM672_RS06830;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_233649461.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 149113 149808 . - . ID=gene-RM672_RS06835;Name=RM672_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06835;old_locus_tag=RM672_06830 NZ_JAVRJS010000003.1 Protein Homology CDS 149113 149808 . - 0 ID=cds-WP_037574913.1;Parent=gene-RM672_RS06835;Dbxref=GenBank:WP_037574913.1;Name=WP_037574913.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=RM672_RS06835;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574913.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 150274 151068 . + . ID=gene-RM672_RS06840;Name=RM672_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06840;old_locus_tag=RM672_06835 NZ_JAVRJS010000003.1 Protein Homology CDS 150274 151068 . + 0 ID=cds-WP_037574911.1;Parent=gene-RM672_RS06840;Dbxref=GenBank:WP_037574911.1;Name=WP_037574911.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382877.1;locus_tag=RM672_RS06840;product=inositol monophosphatase family protein;protein_id=WP_037574911.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 151217 152131 . + . ID=gene-RM672_RS06845;Name=RM672_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06845;old_locus_tag=RM672_06840 NZ_JAVRJS010000003.1 Protein Homology CDS 151217 152131 . + 0 ID=cds-WP_051604976.1;Parent=gene-RM672_RS06845;Dbxref=GenBank:WP_051604976.1;Name=WP_051604976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460126.1;locus_tag=RM672_RS06845;product=LCP family glycopolymer transferase;protein_id=WP_051604976.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 152229 152870 . + . ID=gene-RM672_RS06850;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=RM672_RS06850;old_locus_tag=RM672_06845 NZ_JAVRJS010000003.1 Protein Homology CDS 152229 152870 . + 0 ID=cds-WP_107360712.1;Parent=gene-RM672_RS06850;Dbxref=GenBank:WP_107360712.1;Name=WP_107360712.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167170.1;locus_tag=RM672_RS06850;product=pyroglutamyl-peptidase I;protein_id=WP_107360712.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 153043 155979 . + . ID=gene-RM672_RS06855;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=RM672_RS06855;old_locus_tag=RM672_06850 NZ_JAVRJS010000003.1 Protein Homology CDS 153043 155979 . + 0 ID=cds-WP_105963164.1;Parent=gene-RM672_RS06855;Dbxref=GenBank:WP_105963164.1;Name=WP_105963164.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=RM672_RS06855;product=formate dehydrogenase subunit alpha;protein_id=WP_105963164.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 155979 156443 . + . ID=gene-RM672_RS06860;Name=RM672_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06860;old_locus_tag=RM672_06855 NZ_JAVRJS010000003.1 Protein Homology CDS 155979 156443 . + 0 ID=cds-WP_107358479.1;Parent=gene-RM672_RS06860;Dbxref=GenBank:WP_107358479.1;Name=WP_107358479.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506903.1;locus_tag=RM672_RS06860;product=helical membrane plugin domain-containing protein;protein_id=WP_107358479.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 156558 156800 . + . ID=gene-RM672_RS06865;Name=RM672_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06865;old_locus_tag=RM672_06860 NZ_JAVRJS010000003.1 Protein Homology CDS 156558 156800 . + 0 ID=cds-WP_107358480.1;Parent=gene-RM672_RS06865;Dbxref=GenBank:WP_107358480.1;Name=WP_107358480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=RM672_RS06865;product=hypothetical protein;protein_id=WP_107358480.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 156827 157609 . + . ID=gene-RM672_RS06870;Name=RM672_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06870;old_locus_tag=RM672_06865 NZ_JAVRJS010000003.1 Protein Homology CDS 156827 157609 . + 0 ID=cds-WP_107358481.1;Parent=gene-RM672_RS06870;Dbxref=GenBank:WP_107358481.1;Name=WP_107358481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426293.1;locus_tag=RM672_RS06870;product=N-acetylglucosaminidase;protein_id=WP_107358481.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 157741 158865 . + . ID=gene-RM672_RS06875;Name=RM672_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06875;old_locus_tag=RM672_06870 NZ_JAVRJS010000003.1 Protein Homology CDS 157741 158865 . + 0 ID=cds-WP_311541371.1;Parent=gene-RM672_RS06875;Dbxref=GenBank:WP_311541371.1;Name=WP_311541371.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684156.1;locus_tag=RM672_RS06875;product=FAD-dependent monooxygenase;protein_id=WP_311541371.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 158940 159896 . - . ID=gene-RM672_RS06880;Name=RM672_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06880;old_locus_tag=RM672_06875 NZ_JAVRJS010000003.1 Protein Homology CDS 158940 159896 . - 0 ID=cds-WP_105965541.1;Parent=gene-RM672_RS06880;Dbxref=GenBank:WP_105965541.1;Name=WP_105965541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275076.1;locus_tag=RM672_RS06880;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_105965541.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 160102 160671 . - . ID=gene-RM672_RS06885;Name=RM672_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06885;old_locus_tag=RM672_06880 NZ_JAVRJS010000003.1 Protein Homology CDS 160102 160671 . - 0 ID=cds-WP_107360709.1;Parent=gene-RM672_RS06885;Dbxref=GenBank:WP_107360709.1;Name=WP_107360709.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=RM672_RS06885;product=CHAP domain-containing protein;protein_id=WP_107360709.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 161069 161446 . - . ID=gene-RM672_RS06890;Name=RM672_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06890;old_locus_tag=RM672_06885 NZ_JAVRJS010000003.1 Protein Homology CDS 161069 161446 . - 0 ID=cds-WP_037574888.1;Parent=gene-RM672_RS06890;Dbxref=GenBank:WP_037574888.1;Name=WP_037574888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465507.1;locus_tag=RM672_RS06890;product=DUF4870 domain-containing protein;protein_id=WP_037574888.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 161637 162713 . + . ID=gene-RM672_RS06895;Name=RM672_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06895;old_locus_tag=RM672_06890 NZ_JAVRJS010000003.1 Protein Homology CDS 161637 162713 . + 0 ID=cds-WP_105963160.1;Parent=gene-RM672_RS06895;Dbxref=GenBank:WP_105963160.1;Name=WP_105963160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=RM672_RS06895;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_105963160.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 162733 164145 . + . ID=gene-RM672_RS06900;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM672_RS06900;old_locus_tag=RM672_06895 NZ_JAVRJS010000003.1 Protein Homology CDS 162733 164145 . + 0 ID=cds-WP_037574882.1;Parent=gene-RM672_RS06900;Dbxref=GenBank:WP_037574882.1;Name=WP_037574882.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471352.1;locus_tag=RM672_RS06900;product=Na+/H+ antiporter NhaC;protein_id=WP_037574882.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 164270 164743 . + . ID=gene-RM672_RS06905;Name=RM672_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06905;old_locus_tag=RM672_06900 NZ_JAVRJS010000003.1 Protein Homology CDS 164270 164743 . + 0 ID=cds-WP_107360708.1;Parent=gene-RM672_RS06905;Dbxref=GenBank:WP_107360708.1;Name=WP_107360708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=RM672_RS06905;product=hypothetical protein;protein_id=WP_107360708.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 164886 165668 . - . ID=gene-RM672_RS06910;Name=RM672_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06910;old_locus_tag=RM672_06905 NZ_JAVRJS010000003.1 Protein Homology CDS 164886 165668 . - 0 ID=cds-WP_105963158.1;Parent=gene-RM672_RS06910;Dbxref=GenBank:WP_105963158.1;Name=WP_105963158.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717383.1;locus_tag=RM672_RS06910;product=CHAP domain-containing protein;protein_id=WP_105963158.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 166122 166466 . + . ID=gene-RM672_RS06915;Name=RM672_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06915;old_locus_tag=RM672_06910 NZ_JAVRJS010000003.1 Protein Homology CDS 166122 166466 . + 0 ID=cds-WP_103158991.1;Parent=gene-RM672_RS06915;Dbxref=GenBank:WP_103158991.1;Name=WP_103158991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461846.1;locus_tag=RM672_RS06915;product=PH domain-containing protein;protein_id=WP_103158991.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 166596 167645 . + . ID=gene-RM672_RS06920;Name=RM672_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06920;old_locus_tag=RM672_06915 NZ_JAVRJS010000003.1 Protein Homology CDS 166596 167645 . + 0 ID=cds-WP_107360707.1;Parent=gene-RM672_RS06920;Dbxref=GenBank:WP_107360707.1;Name=WP_107360707.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=RM672_RS06920;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_107360707.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 167664 168017 . + . ID=gene-RM672_RS06925;Name=RM672_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06925;old_locus_tag=RM672_06920 NZ_JAVRJS010000003.1 Protein Homology CDS 167664 168017 . + 0 ID=cds-WP_037574870.1;Parent=gene-RM672_RS06925;Dbxref=GenBank:WP_037574870.1;Name=WP_037574870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486907.1;locus_tag=RM672_RS06925;product=DoxX family protein;protein_id=WP_037574870.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 168276 168623 . + . ID=gene-RM672_RS06930;Name=RM672_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06930;old_locus_tag=RM672_06925 NZ_JAVRJS010000003.1 Protein Homology CDS 168276 168623 . + 0 ID=cds-WP_037574867.1;Parent=gene-RM672_RS06930;Dbxref=GenBank:WP_037574867.1;Name=WP_037574867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=RM672_RS06930;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037574867.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 168888 170054 . + . ID=gene-RM672_RS06935;Name=RM672_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06935;old_locus_tag=RM672_06930 NZ_JAVRJS010000003.1 Protein Homology CDS 168888 170054 . + 0 ID=cds-WP_037574864.1;Parent=gene-RM672_RS06935;Dbxref=GenBank:WP_037574864.1;Name=WP_037574864.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169652.1;locus_tag=RM672_RS06935;product=acyl-CoA dehydrogenase family protein;protein_id=WP_037574864.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 170142 170537 . + . ID=gene-RM672_RS06940;Name=RM672_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06940;old_locus_tag=RM672_06935 NZ_JAVRJS010000003.1 Protein Homology CDS 170142 170537 . + 0 ID=cds-WP_037574862.1;Parent=gene-RM672_RS06940;Dbxref=GenBank:WP_037574862.1;Name=WP_037574862.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=RM672_RS06940;product=YbaN family protein;protein_id=WP_037574862.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 170725 171639 . + . ID=gene-RM672_RS06945;Name=RM672_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06945;old_locus_tag=RM672_06940 NZ_JAVRJS010000003.1 Protein Homology CDS 170725 171639 . + 0 ID=cds-WP_037574859.1;Parent=gene-RM672_RS06945;Dbxref=GenBank:WP_037574859.1;Name=WP_037574859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471258.1;locus_tag=RM672_RS06945;product=ABC transporter substrate-binding protein;protein_id=WP_037574859.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 171968 172522 . + . ID=gene-RM672_RS06950;Name=RM672_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06950;old_locus_tag=RM672_06945 NZ_JAVRJS010000003.1 Protein Homology CDS 171968 172522 . + 0 ID=cds-WP_037574857.1;Parent=gene-RM672_RS06950;Dbxref=GenBank:WP_037574857.1;Name=WP_037574857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=RM672_RS06950;product=biotin transporter BioY;protein_id=WP_037574857.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 172547 173305 . + . ID=gene-RM672_RS06955;Name=RM672_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06955;old_locus_tag=RM672_06950 NZ_JAVRJS010000003.1 Protein Homology CDS 172547 173305 . + 0 ID=cds-WP_241954937.1;Parent=gene-RM672_RS06955;Dbxref=GenBank:WP_241954937.1;Name=WP_241954937.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426315.1;locus_tag=RM672_RS06955;product=GNAT family N-acetyltransferase;protein_id=WP_241954937.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 173377 174174 . - . ID=gene-RM672_RS06960;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=RM672_RS06960;old_locus_tag=RM672_06955 NZ_JAVRJS010000003.1 Protein Homology CDS 173377 174174 . - 0 ID=cds-WP_037574851.1;Parent=gene-RM672_RS06960;Dbxref=GenBank:WP_037574851.1;Name=WP_037574851.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501012.1;locus_tag=RM672_RS06960;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_037574851.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 174363 175136 . + . ID=gene-RM672_RS06965;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=RM672_RS06965;old_locus_tag=RM672_06960 NZ_JAVRJS010000003.1 Protein Homology CDS 174363 175136 . + 0 ID=cds-WP_103158995.1;Parent=gene-RM672_RS06965;Dbxref=GenBank:WP_103158995.1;Name=WP_103158995.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=RM672_RS06965;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_103158995.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 175145 175816 . + . ID=gene-RM672_RS06970;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=RM672_RS06970;old_locus_tag=RM672_06965 NZ_JAVRJS010000003.1 Protein Homology CDS 175145 175816 . + 0 ID=cds-WP_037574845.1;Parent=gene-RM672_RS06970;Dbxref=GenBank:WP_037574845.1;Name=WP_037574845.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113094.1;locus_tag=RM672_RS06970;product=molybdate ABC transporter permease subunit;protein_id=WP_037574845.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 175817 176443 . + . ID=gene-RM672_RS06975;Name=RM672_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06975;old_locus_tag=RM672_06970 NZ_JAVRJS010000003.1 Protein Homology CDS 175817 176443 . + 0 ID=cds-WP_037574842.1;Parent=gene-RM672_RS06975;Dbxref=GenBank:WP_037574842.1;Name=WP_037574842.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=RM672_RS06975;product=ATP-binding cassette domain-containing protein;protein_id=WP_037574842.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 176651 177655 . + . ID=gene-RM672_RS06980;Name=RM672_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06980;old_locus_tag=RM672_06975 NZ_JAVRJS010000003.1 Protein Homology CDS 176651 177655 . + 0 ID=cds-WP_037574840.1;Parent=gene-RM672_RS06980;Dbxref=GenBank:WP_037574840.1;Name=WP_037574840.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453805.1;locus_tag=RM672_RS06980;product=ThiF family adenylyltransferase;protein_id=WP_037574840.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 177668 178168 . + . ID=gene-RM672_RS06985;Name=RM672_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06985;old_locus_tag=RM672_06980 NZ_JAVRJS010000003.1 Protein Homology CDS 177668 178168 . + 0 ID=cds-WP_103158996.1;Parent=gene-RM672_RS06985;Dbxref=GenBank:WP_103158996.1;Name=WP_103158996.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382827.1;locus_tag=RM672_RS06985;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_103158996.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 178251 178733 . - . ID=gene-RM672_RS06990;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=RM672_RS06990;old_locus_tag=RM672_06985 NZ_JAVRJS010000003.1 Protein Homology CDS 178251 178733 . - 0 ID=cds-WP_037574834.1;Parent=gene-RM672_RS06990;Dbxref=GenBank:WP_037574834.1;Name=WP_037574834.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722900.1;locus_tag=RM672_RS06990;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_037574834.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 178802 180061 . + . ID=gene-RM672_RS06995;Name=RM672_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS06995;old_locus_tag=RM672_06990 NZ_JAVRJS010000003.1 Protein Homology CDS 178802 180061 . + 0 ID=cds-WP_103158997.1;Parent=gene-RM672_RS06995;Dbxref=GenBank:WP_103158997.1;Name=WP_103158997.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382825.1;locus_tag=RM672_RS06995;product=molybdopterin molybdotransferase MoeA;protein_id=WP_103158997.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 180058 180537 . + . ID=gene-RM672_RS07000;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=RM672_RS07000;old_locus_tag=RM672_06995 NZ_JAVRJS010000003.1 Protein Homology CDS 180058 180537 . + 0 ID=cds-WP_107360510.1;Parent=gene-RM672_RS07000;Dbxref=GenBank:WP_107360510.1;Name=WP_107360510.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461817.1;locus_tag=RM672_RS07000;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_107360510.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 180539 180991 . + . ID=gene-RM672_RS07005;Name=RM672_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07005;old_locus_tag=RM672_07000 NZ_JAVRJS010000003.1 Protein Homology CDS 180539 180991 . + 0 ID=cds-WP_037574826.1;Parent=gene-RM672_RS07005;Dbxref=GenBank:WP_037574826.1;Name=WP_037574826.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506945.1;locus_tag=RM672_RS07005;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_037574826.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 180988 181221 . + . ID=gene-RM672_RS07010;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=RM672_RS07010;old_locus_tag=RM672_07005 NZ_JAVRJS010000003.1 Protein Homology CDS 180988 181221 . + 0 ID=cds-WP_037574823.1;Parent=gene-RM672_RS07010;Dbxref=GenBank:WP_037574823.1;Name=WP_037574823.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=RM672_RS07010;product=molybdopterin converting factor subunit 1;protein_id=WP_037574823.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 181231 181839 . + . ID=gene-RM672_RS07015;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=RM672_RS07015;old_locus_tag=RM672_07010 NZ_JAVRJS010000003.1 Protein Homology CDS 181231 181839 . + 0 ID=cds-WP_107360511.1;Parent=gene-RM672_RS07015;Dbxref=GenBank:WP_107360511.1;Name=WP_107360511.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509294.1;locus_tag=RM672_RS07015;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_107360511.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 181854 182876 . + . ID=gene-RM672_RS07020;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=RM672_RS07020;old_locus_tag=RM672_07015 NZ_JAVRJS010000003.1 Protein Homology CDS 181854 182876 . + 0 ID=cds-WP_107360512.1;Parent=gene-RM672_RS07020;Dbxref=GenBank:WP_107360512.1;Name=WP_107360512.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=RM672_RS07020;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_107360512.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 182995 184827 . - . ID=gene-RM672_RS07025;Name=RM672_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07025;old_locus_tag=RM672_07020 NZ_JAVRJS010000003.1 Protein Homology CDS 182995 184827 . - 0 ID=cds-WP_107360513.1;Parent=gene-RM672_RS07025;Dbxref=GenBank:WP_107360513.1;Name=WP_107360513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426334.1;locus_tag=RM672_RS07025;product=DUF8508 domain-containing protein;protein_id=WP_107360513.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 185025 185468 . - . ID=gene-RM672_RS07030;Name=RM672_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07030;old_locus_tag=RM672_07025 NZ_JAVRJS010000003.1 Protein Homology CDS 185025 185468 . - 0 ID=cds-WP_107360514.1;Parent=gene-RM672_RS07030;Dbxref=GenBank:WP_107360514.1;Name=WP_107360514.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169682.1;locus_tag=RM672_RS07030;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_107360514.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 185695 186462 . + . ID=gene-RM672_RS07035;Name=RM672_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07035;old_locus_tag=RM672_07030 NZ_JAVRJS010000003.1 Protein Homology CDS 185695 186462 . + 0 ID=cds-WP_103159001.1;Parent=gene-RM672_RS07035;Dbxref=GenBank:WP_103159001.1;Name=WP_103159001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426336.1;locus_tag=RM672_RS07035;product=VOC family protein;protein_id=WP_103159001.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 186453 186707 . - . ID=gene-RM672_RS07040;Name=RM672_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07040;old_locus_tag=RM672_07035 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 186453 186707 . - 0 ID=cds-WP_107360515.1;Parent=gene-RM672_RS07040;Dbxref=GenBank:WP_107360515.1;Name=WP_107360515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07040;product=hypothetical protein;protein_id=WP_107360515.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 186817 188067 . + . ID=gene-RM672_RS07045;Name=RM672_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07045;old_locus_tag=RM672_07040 NZ_JAVRJS010000003.1 Protein Homology CDS 186817 188067 . + 0 ID=cds-WP_107360516.1;Parent=gene-RM672_RS07045;Dbxref=GenBank:WP_107360516.1;Name=WP_107360516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506953.1;locus_tag=RM672_RS07045;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_107360516.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 188451 191606 . + . ID=gene-RM672_RS07050;Name=RM672_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07050;old_locus_tag=RM672_07045 NZ_JAVRJS010000003.1 Protein Homology CDS 188451 191606 . + 0 ID=cds-WP_037574809.1;Parent=gene-RM672_RS07050;Dbxref=GenBank:WP_037574809.1;Name=WP_037574809.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=RM672_RS07050;product=efflux RND transporter permease subunit;protein_id=WP_037574809.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 191852 193003 . + . ID=gene-RM672_RS07055;Name=RM672_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07055;old_locus_tag=RM672_07050 NZ_JAVRJS010000003.1 Protein Homology CDS 191852 193003 . + 0 ID=cds-WP_107360518.1;Parent=gene-RM672_RS07055;Dbxref=GenBank:WP_107360518.1;Name=WP_107360518.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723795.1;locus_tag=RM672_RS07055;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_107360518.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 193070 193387 . - . ID=gene-RM672_RS07060;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=RM672_RS07060;old_locus_tag=RM672_07055 NZ_JAVRJS010000003.1 Protein Homology CDS 193070 193387 . - 0 ID=cds-WP_037574805.1;Parent=gene-RM672_RS07060;Dbxref=GenBank:WP_037574805.1;Name=WP_037574805.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=RM672_RS07060;product=membrane stabilizing protein MspA;protein_id=WP_037574805.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 193430 193603 . - . ID=gene-RM672_RS07065;Name=RM672_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07065;old_locus_tag=RM672_07060 NZ_JAVRJS010000003.1 Protein Homology CDS 193430 193603 . - 0 ID=cds-WP_169301477.1;Parent=gene-RM672_RS07065;Dbxref=GenBank:WP_169301477.1;Name=WP_169301477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500988.1;locus_tag=RM672_RS07065;product=SE1832 family protein;protein_id=WP_169301477.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 193730 194644 . + . ID=gene-RM672_RS07070;Name=RM672_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07070;old_locus_tag=RM672_07065 NZ_JAVRJS010000003.1 Protein Homology CDS 193730 194644 . + 0 ID=cds-WP_037574803.1;Parent=gene-RM672_RS07070;Dbxref=GenBank:WP_037574803.1;Name=WP_037574803.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488634.1;locus_tag=RM672_RS07070;product=AEC family transporter;protein_id=WP_037574803.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 194683 195543 . - . ID=gene-RM672_RS07075;Name=RM672_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07075;old_locus_tag=RM672_07070 NZ_JAVRJS010000003.1 Protein Homology CDS 194683 195543 . - 0 ID=cds-WP_311539516.1;Parent=gene-RM672_RS07075;Dbxref=GenBank:WP_311539516.1;Name=WP_311539516.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=RM672_RS07075;product=GNAT family N-acetyltransferase;protein_id=WP_311539516.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 195665 197797 . + . ID=gene-RM672_RS07080;Name=RM672_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07080;old_locus_tag=RM672_07075 NZ_JAVRJS010000003.1 Protein Homology CDS 195665 197797 . + 0 ID=cds-WP_037574799.1;Parent=gene-RM672_RS07080;Dbxref=GenBank:WP_037574799.1;Name=WP_037574799.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838504.1;locus_tag=RM672_RS07080;product=DNA topoisomerase III;protein_id=WP_037574799.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 197909 199243 . + . ID=gene-RM672_RS07085;Name=RM672_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07085;old_locus_tag=RM672_07080 NZ_JAVRJS010000003.1 Protein Homology CDS 197909 199243 . + 0 ID=cds-WP_107363507.1;Parent=gene-RM672_RS07085;Dbxref=GenBank:WP_107363507.1;Name=WP_107363507.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=RM672_RS07085;product=NCS2 family permease;protein_id=WP_107363507.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 199705 200013 . + . ID=gene-RM672_RS07090;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=RM672_RS07090;old_locus_tag=RM672_07085 NZ_JAVRJS010000003.1 Protein Homology CDS 199705 200013 . + 0 ID=cds-WP_001118667.1;Parent=gene-RM672_RS07090;Dbxref=GenBank:WP_001118667.1;Name=WP_001118667.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=RM672_RS07090;product=30S ribosomal protein S10;protein_id=WP_001118667.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 200041 200700 . + . ID=gene-RM672_RS07095;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=RM672_RS07095;old_locus_tag=RM672_07090 NZ_JAVRJS010000003.1 Protein Homology CDS 200041 200700 . + 0 ID=cds-WP_037574795.1;Parent=gene-RM672_RS07095;Dbxref=GenBank:WP_037574795.1;Name=WP_037574795.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=RM672_RS07095;product=50S ribosomal protein L3;protein_id=WP_037574795.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 200727 201350 . + . ID=gene-RM672_RS07100;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=RM672_RS07100;old_locus_tag=RM672_07095 NZ_JAVRJS010000003.1 Protein Homology CDS 200727 201350 . + 0 ID=cds-WP_037574793.1;Parent=gene-RM672_RS07100;Dbxref=GenBank:WP_037574793.1;Name=WP_037574793.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=RM672_RS07100;product=50S ribosomal protein L4;protein_id=WP_037574793.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 201350 201625 . + . ID=gene-RM672_RS07105;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=RM672_RS07105;old_locus_tag=RM672_07100 NZ_JAVRJS010000003.1 Protein Homology CDS 201350 201625 . + 0 ID=cds-WP_037567103.1;Parent=gene-RM672_RS07105;Dbxref=GenBank:WP_037567103.1;Name=WP_037567103.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=RM672_RS07105;product=50S ribosomal protein L23;protein_id=WP_037567103.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 201655 202488 . + . ID=gene-RM672_RS07110;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=RM672_RS07110;old_locus_tag=RM672_07105 NZ_JAVRJS010000003.1 Protein Homology CDS 201655 202488 . + 0 ID=cds-WP_037574791.1;Parent=gene-RM672_RS07110;Dbxref=GenBank:WP_037574791.1;Name=WP_037574791.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=RM672_RS07110;product=50S ribosomal protein L2;protein_id=WP_037574791.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 202553 202831 . + . ID=gene-RM672_RS07115;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=RM672_RS07115;old_locus_tag=RM672_07110 NZ_JAVRJS010000003.1 Protein Homology CDS 202553 202831 . + 0 ID=cds-WP_014613216.1;Parent=gene-RM672_RS07115;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=RM672_RS07115;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 202858 203211 . + . ID=gene-RM672_RS07120;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=RM672_RS07120;old_locus_tag=RM672_07115 NZ_JAVRJS010000003.1 Protein Homology CDS 202858 203211 . + 0 ID=cds-WP_037574789.1;Parent=gene-RM672_RS07120;Dbxref=GenBank:WP_037574789.1;Name=WP_037574789.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=RM672_RS07120;product=50S ribosomal protein L22;protein_id=WP_037574789.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 203234 203887 . + . ID=gene-RM672_RS07125;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=RM672_RS07125;old_locus_tag=RM672_07120 NZ_JAVRJS010000003.1 Protein Homology CDS 203234 203887 . + 0 ID=cds-WP_037574787.1;Parent=gene-RM672_RS07125;Dbxref=GenBank:WP_037574787.1;Name=WP_037574787.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=RM672_RS07125;product=30S ribosomal protein S3;protein_id=WP_037574787.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 203890 204324 . + . ID=gene-RM672_RS07130;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=RM672_RS07130;old_locus_tag=RM672_07125 NZ_JAVRJS010000003.1 Protein Homology CDS 203890 204324 . + 0 ID=cds-WP_037567112.1;Parent=gene-RM672_RS07130;Dbxref=GenBank:WP_037567112.1;Name=WP_037567112.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=RM672_RS07130;product=50S ribosomal protein L16;protein_id=WP_037567112.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 204314 204523 . + . ID=gene-RM672_RS07135;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=RM672_RS07135;old_locus_tag=RM672_07130 NZ_JAVRJS010000003.1 Protein Homology CDS 204314 204523 . + 0 ID=cds-WP_014613220.1;Parent=gene-RM672_RS07135;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=RM672_RS07135;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 204548 204811 . + . ID=gene-RM672_RS07140;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=RM672_RS07140;old_locus_tag=RM672_07135 NZ_JAVRJS010000003.1 Protein Homology CDS 204548 204811 . + 0 ID=cds-WP_037567114.1;Parent=gene-RM672_RS07140;Dbxref=GenBank:WP_037567114.1;Name=WP_037567114.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=RM672_RS07140;product=30S ribosomal protein S17;protein_id=WP_037567114.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 204842 205210 . + . ID=gene-RM672_RS07145;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=RM672_RS07145;old_locus_tag=RM672_07140 NZ_JAVRJS010000003.1 Protein Homology CDS 204842 205210 . + 0 ID=cds-WP_014613222.1;Parent=gene-RM672_RS07145;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=RM672_RS07145;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 205249 205566 . + . ID=gene-RM672_RS07150;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=RM672_RS07150;old_locus_tag=RM672_07145 NZ_JAVRJS010000003.1 Protein Homology CDS 205249 205566 . + 0 ID=cds-WP_037567116.1;Parent=gene-RM672_RS07150;Dbxref=GenBank:WP_037567116.1;Name=WP_037567116.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911103.1;locus_tag=RM672_RS07150;product=50S ribosomal protein L24;protein_id=WP_037567116.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 205591 206130 . + . ID=gene-RM672_RS07155;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=RM672_RS07155;old_locus_tag=RM672_07150 NZ_JAVRJS010000003.1 Protein Homology CDS 205591 206130 . + 0 ID=cds-WP_311539517.1;Parent=gene-RM672_RS07155;Dbxref=GenBank:WP_311539517.1;Name=WP_311539517.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=RM672_RS07155;product=50S ribosomal protein L5;protein_id=WP_311539517.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 206152 206337 . + . ID=gene-RM672_RS07160;Name=RM672_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07160;old_locus_tag=RM672_07155 NZ_JAVRJS010000003.1 Protein Homology CDS 206152 206337 . + 0 ID=cds-WP_037574783.1;Parent=gene-RM672_RS07160;Dbxref=GenBank:WP_037574783.1;Name=WP_037574783.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=RM672_RS07160;product=type Z 30S ribosomal protein S14;protein_id=WP_037574783.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 206369 206767 . + . ID=gene-RM672_RS07165;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=RM672_RS07165;old_locus_tag=RM672_07160 NZ_JAVRJS010000003.1 Protein Homology CDS 206369 206767 . + 0 ID=cds-WP_037574781.1;Parent=gene-RM672_RS07165;Dbxref=GenBank:WP_037574781.1;Name=WP_037574781.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=RM672_RS07165;product=30S ribosomal protein S8;protein_id=WP_037574781.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 206797 207333 . + . ID=gene-RM672_RS07170;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=RM672_RS07170;old_locus_tag=RM672_07165 NZ_JAVRJS010000003.1 Protein Homology CDS 206797 207333 . + 0 ID=cds-WP_037567123.1;Parent=gene-RM672_RS07170;Dbxref=GenBank:WP_037567123.1;Name=WP_037567123.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=RM672_RS07170;product=50S ribosomal protein L6;protein_id=WP_037567123.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 207364 207723 . + . ID=gene-RM672_RS07175;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=RM672_RS07175;old_locus_tag=RM672_07170 NZ_JAVRJS010000003.1 Protein Homology CDS 207364 207723 . + 0 ID=cds-WP_037574779.1;Parent=gene-RM672_RS07175;Dbxref=GenBank:WP_037574779.1;Name=WP_037574779.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500963.1;locus_tag=RM672_RS07175;product=50S ribosomal protein L18;protein_id=WP_037574779.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 207745 208245 . + . ID=gene-RM672_RS07180;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=RM672_RS07180;old_locus_tag=RM672_07175 NZ_JAVRJS010000003.1 Protein Homology CDS 207745 208245 . + 0 ID=cds-WP_037574777.1;Parent=gene-RM672_RS07180;Dbxref=GenBank:WP_037574777.1;Name=WP_037574777.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=RM672_RS07180;product=30S ribosomal protein S5;protein_id=WP_037574777.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 208263 208442 . + . ID=gene-RM672_RS07185;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=RM672_RS07185;old_locus_tag=RM672_07180 NZ_JAVRJS010000003.1 Protein Homology CDS 208263 208442 . + 0 ID=cds-WP_037574776.1;Parent=gene-RM672_RS07185;Dbxref=GenBank:WP_037574776.1;Name=WP_037574776.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=RM672_RS07185;product=50S ribosomal protein L30;protein_id=WP_037574776.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 208459 208899 . + . ID=gene-RM672_RS07190;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=RM672_RS07190;old_locus_tag=RM672_07185 NZ_JAVRJS010000003.1 Protein Homology CDS 208459 208899 . + 0 ID=cds-WP_037574774.1;Parent=gene-RM672_RS07190;Dbxref=GenBank:WP_037574774.1;Name=WP_037574774.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=RM672_RS07190;product=50S ribosomal protein L15;protein_id=WP_037574774.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 208899 210191 . + . ID=gene-RM672_RS07195;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=RM672_RS07195;old_locus_tag=RM672_07190 NZ_JAVRJS010000003.1 Protein Homology CDS 208899 210191 . + 0 ID=cds-WP_037574771.1;Parent=gene-RM672_RS07195;Dbxref=GenBank:WP_037574771.1;Name=WP_037574771.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=RM672_RS07195;product=preprotein translocase subunit SecY;protein_id=WP_037574771.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 210209 210859 . + . ID=gene-RM672_RS07200;Name=RM672_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07200;old_locus_tag=RM672_07195 NZ_JAVRJS010000003.1 Protein Homology CDS 210209 210859 . + 0 ID=cds-WP_037574768.1;Parent=gene-RM672_RS07200;Dbxref=GenBank:WP_037574768.1;Name=WP_037574768.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448556.1;locus_tag=RM672_RS07200;product=adenylate kinase;protein_id=WP_037574768.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 211027 211245 . + . ID=gene-RM672_RS07205;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=RM672_RS07205;old_locus_tag=RM672_07200 NZ_JAVRJS010000003.1 Protein Homology CDS 211027 211245 . + 0 ID=cds-WP_001118443.1;Parent=gene-RM672_RS07205;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=RM672_RS07205;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 211278 211391 . + . ID=gene-RM672_RS07210;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=RM672_RS07210;old_locus_tag=RM672_07205 NZ_JAVRJS010000003.1 Protein Homology CDS 211278 211391 . + 0 ID=cds-WP_002509257.1;Parent=gene-RM672_RS07210;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=RM672_RS07210;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 211414 211779 . + . ID=gene-RM672_RS07215;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=RM672_RS07215;old_locus_tag=RM672_07210 NZ_JAVRJS010000003.1 Protein Homology CDS 211414 211779 . + 0 ID=cds-WP_037574765.1;Parent=gene-RM672_RS07215;Dbxref=GenBank:WP_037574765.1;Name=WP_037574765.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=RM672_RS07215;product=30S ribosomal protein S13;protein_id=WP_037574765.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 211804 212193 . + . ID=gene-RM672_RS07220;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=RM672_RS07220;old_locus_tag=RM672_07215 NZ_JAVRJS010000003.1 Protein Homology CDS 211804 212193 . + 0 ID=cds-WP_014613235.1;Parent=gene-RM672_RS07220;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=RM672_RS07220;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 212277 213221 . + . ID=gene-RM672_RS07225;Name=RM672_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07225;old_locus_tag=RM672_07220 NZ_JAVRJS010000003.1 Protein Homology CDS 212277 213221 . + 0 ID=cds-WP_037574762.1;Parent=gene-RM672_RS07225;Dbxref=GenBank:WP_037574762.1;Name=WP_037574762.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=RM672_RS07225;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_037574762.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 213238 213606 . + . ID=gene-RM672_RS07230;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=RM672_RS07230;old_locus_tag=RM672_07225 NZ_JAVRJS010000003.1 Protein Homology CDS 213238 213606 . + 0 ID=cds-WP_037574759.1;Parent=gene-RM672_RS07230;Dbxref=GenBank:WP_037574759.1;Name=WP_037574759.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=RM672_RS07230;product=50S ribosomal protein L17;protein_id=WP_037574759.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 213974 214777 . + . ID=gene-RM672_RS07235;Name=RM672_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07235;old_locus_tag=RM672_07230 NZ_JAVRJS010000003.1 Protein Homology CDS 213974 214777 . + 0 ID=cds-WP_037574756.1;Parent=gene-RM672_RS07235;Dbxref=GenBank:WP_037574756.1;Name=WP_037574756.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506987.1;locus_tag=RM672_RS07235;product=energy-coupling factor transporter ATPase;protein_id=WP_037574756.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 214774 215640 . + . ID=gene-RM672_RS07240;Name=RM672_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07240;old_locus_tag=RM672_07235 NZ_JAVRJS010000003.1 Protein Homology CDS 214774 215640 . + 0 ID=cds-WP_037574753.1;Parent=gene-RM672_RS07240;Dbxref=GenBank:WP_037574753.1;Name=WP_037574753.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167911.1;locus_tag=RM672_RS07240;product=energy-coupling factor transporter ATPase;protein_id=WP_037574753.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 215630 216433 . + . ID=gene-RM672_RS07245;Name=RM672_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07245;old_locus_tag=RM672_07240 NZ_JAVRJS010000003.1 Protein Homology CDS 215630 216433 . + 0 ID=cds-WP_037574751.1;Parent=gene-RM672_RS07245;Dbxref=GenBank:WP_037574751.1;Name=WP_037574751.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638503.1;locus_tag=RM672_RS07245;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_037574751.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 216448 217278 . + . ID=gene-RM672_RS07250;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=RM672_RS07250;old_locus_tag=RM672_07245 NZ_JAVRJS010000003.1 Protein Homology CDS 216448 217278 . + 0 ID=cds-WP_103158739.1;Parent=gene-RM672_RS07250;Dbxref=GenBank:WP_103158739.1;Name=WP_103158739.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506990.1;locus_tag=RM672_RS07250;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_103158739.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 217467 217904 . + . ID=gene-RM672_RS07255;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=RM672_RS07255;old_locus_tag=RM672_07250 NZ_JAVRJS010000003.1 Protein Homology CDS 217467 217904 . + 0 ID=cds-WP_037574745.1;Parent=gene-RM672_RS07255;Dbxref=GenBank:WP_037574745.1;Name=WP_037574745.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=RM672_RS07255;product=50S ribosomal protein L13;protein_id=WP_037574745.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 217924 218316 . + . ID=gene-RM672_RS07260;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=RM672_RS07260;old_locus_tag=RM672_07255 NZ_JAVRJS010000003.1 Protein Homology CDS 217924 218316 . + 0 ID=cds-WP_037542446.1;Parent=gene-RM672_RS07260;Dbxref=GenBank:WP_037542446.1;Name=WP_037542446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=RM672_RS07260;product=30S ribosomal protein S9;protein_id=WP_037542446.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 219032 219784 . + . ID=gene-RM672_RS07265;Name=RM672_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07265;old_locus_tag=RM672_07260 NZ_JAVRJS010000003.1 Protein Homology CDS 219032 219784 . + 0 ID=cds-WP_037574742.1;Parent=gene-RM672_RS07265;Dbxref=GenBank:WP_037574742.1;Name=WP_037574742.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=RM672_RS07265;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037574742.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 220025 220453 . + . ID=gene-RM672_RS07270;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=RM672_RS07270;old_locus_tag=RM672_07265 NZ_JAVRJS010000003.1 Protein Homology CDS 220025 220453 . + 0 ID=cds-WP_037574739.1;Parent=gene-RM672_RS07270;Dbxref=GenBank:WP_037574739.1;Name=WP_037574739.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=RM672_RS07270;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_037574739.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 220469 220984 . + . ID=gene-RM672_RS07275;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=RM672_RS07275;old_locus_tag=RM672_07270 NZ_JAVRJS010000003.1 Protein Homology CDS 220469 220984 . + 0 ID=cds-WP_262621628.1;Parent=gene-RM672_RS07275;Dbxref=GenBank:WP_262621628.1;Name=WP_262621628.1;Ontology_term=GO:0005990,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=RM672_RS07275;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_262621628.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 221087 222058 . + . ID=gene-RM672_RS07280;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=RM672_RS07280;old_locus_tag=RM672_07275 NZ_JAVRJS010000003.1 Protein Homology CDS 221087 222058 . + 0 ID=cds-WP_311539518.1;Parent=gene-RM672_RS07280;Dbxref=GenBank:WP_311539518.1;Name=WP_311539518.1;Ontology_term=GO:0005990,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=RM672_RS07280;product=tagatose-bisphosphate aldolase;protein_id=WP_311539518.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 222089 222403 . + . ID=gene-RM672_RS07285;Name=RM672_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07285;old_locus_tag=RM672_07280 NZ_JAVRJS010000003.1 Protein Homology CDS 222089 222403 . + 0 ID=cds-WP_037574730.1;Parent=gene-RM672_RS07285;Dbxref=GenBank:WP_037574730.1;Name=WP_037574730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=RM672_RS07285;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_037574730.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 222409 224157 . + . ID=gene-RM672_RS07290;Name=RM672_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07290;old_locus_tag=RM672_07285 NZ_JAVRJS010000003.1 Protein Homology CDS 222409 224157 . + 0 ID=cds-WP_311541374.1;Parent=gene-RM672_RS07290;Dbxref=GenBank:WP_311541374.1;Name=WP_311541374.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=RM672_RS07290;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_311541374.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 224173 225576 . + . ID=gene-RM672_RS07295;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=RM672_RS07295;old_locus_tag=RM672_07290 NZ_JAVRJS010000003.1 Protein Homology CDS 224173 225576 . + 0 ID=cds-WP_037574726.1;Parent=gene-RM672_RS07295;Dbxref=GenBank:WP_037574726.1;Name=WP_037574726.1;Ontology_term=GO:0005990,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275160.1;locus_tag=RM672_RS07295;product=6-phospho-beta-galactosidase;protein_id=WP_037574726.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 225842 226849 . + . ID=gene-RM672_RS07300;Name=RM672_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07300;old_locus_tag=RM672_07295 NZ_JAVRJS010000003.1 Protein Homology CDS 225842 226849 . + 0 ID=cds-WP_103158742.1;Parent=gene-RM672_RS07300;Dbxref=GenBank:WP_103158742.1;Name=WP_103158742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=RM672_RS07300;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_103158742.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 226927 228453 . + . ID=gene-RM672_RS07305;Name=RM672_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07305;old_locus_tag=RM672_07300 NZ_JAVRJS010000003.1 Protein Homology CDS 226927 228453 . + 0 ID=cds-WP_037574720.1;Parent=gene-RM672_RS07305;Dbxref=GenBank:WP_037574720.1;Name=WP_037574720.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900934.1;locus_tag=RM672_RS07305;product=BCCT family transporter;protein_id=WP_037574720.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 228717 229046 . + . ID=gene-RM672_RS07310;Name=RM672_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07310;old_locus_tag=RM672_07305 NZ_JAVRJS010000003.1 GeneMarkS-2+ CDS 228717 229046 . + 0 ID=cds-WP_103159485.1;Parent=gene-RM672_RS07310;Dbxref=GenBank:WP_103159485.1;Name=WP_103159485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07310;product=hypothetical protein;protein_id=WP_103159485.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 229105 230256 . - . ID=gene-RM672_RS07315;Name=RM672_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07315;old_locus_tag=RM672_07310 NZ_JAVRJS010000003.1 Protein Homology CDS 229105 230256 . - 0 ID=cds-WP_037574714.1;Parent=gene-RM672_RS07315;Dbxref=GenBank:WP_037574714.1;Name=WP_037574714.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426390.1;locus_tag=RM672_RS07315;product=MFS transporter;protein_id=WP_037574714.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 230396 232342 . - . ID=gene-RM672_RS07320;Name=RM672_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07320;old_locus_tag=RM672_07315 NZ_JAVRJS010000003.1 Protein Homology CDS 230396 232342 . - 0 ID=cds-WP_311541375.1;Parent=gene-RM672_RS07320;Dbxref=GenBank:WP_311541375.1;Name=WP_311541375.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432557.1;locus_tag=RM672_RS07320;product=IucA/IucC family protein;protein_id=WP_311541375.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 232444 233610 . + . ID=gene-RM672_RS07325;Name=RM672_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07325;old_locus_tag=RM672_07320 NZ_JAVRJS010000003.1 Protein Homology CDS 232444 233610 . + 0 ID=cds-WP_037574708.1;Parent=gene-RM672_RS07325;Dbxref=GenBank:WP_037574708.1;Name=WP_037574708.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302621.1;locus_tag=RM672_RS07325;product=MFS transporter;protein_id=WP_037574708.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 233612 235375 . + . ID=gene-RM672_RS07330;Name=RM672_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07330;old_locus_tag=RM672_07325 NZ_JAVRJS010000003.1 Protein Homology CDS 233612 235375 . + 0 ID=cds-WP_107366045.1;Parent=gene-RM672_RS07330;Dbxref=GenBank:WP_107366045.1;Name=WP_107366045.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=RM672_RS07330;product=IucA/IucC family protein;protein_id=WP_107366045.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 235379 236449 . + . ID=gene-RM672_RS07335;Name=RM672_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07335;old_locus_tag=RM672_07330 NZ_JAVRJS010000003.1 Protein Homology CDS 235379 236449 . + 0 ID=cds-WP_107366044.1;Parent=gene-RM672_RS07335;Dbxref=GenBank:WP_107366044.1;Name=WP_107366044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=RM672_RS07335;product=alanine racemase;protein_id=WP_107366044.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 236523 237500 . + . ID=gene-RM672_RS07340;Name=RM672_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07340;old_locus_tag=RM672_07335 NZ_JAVRJS010000003.1 Protein Homology CDS 236523 237500 . + 0 ID=cds-WP_037575241.1;Parent=gene-RM672_RS07340;Dbxref=GenBank:WP_037575241.1;Name=WP_037575241.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722966.1;locus_tag=RM672_RS07340;product=ABC transporter substrate-binding protein;protein_id=WP_037575241.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 237546 238571 . + . ID=gene-RM672_RS07345;Name=RM672_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07345;old_locus_tag=RM672_07340 NZ_JAVRJS010000003.1 Protein Homology CDS 237546 238571 . + 0 ID=cds-WP_037574700.1;Parent=gene-RM672_RS07345;Dbxref=GenBank:WP_037574700.1;Name=WP_037574700.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364803.1;locus_tag=RM672_RS07345;product=FecCD family ABC transporter permease;protein_id=WP_037574700.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 238568 239530 . + . ID=gene-RM672_RS07350;Name=RM672_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07350;old_locus_tag=RM672_07345 NZ_JAVRJS010000003.1 Protein Homology CDS 238568 239530 . + 0 ID=cds-WP_311541376.1;Parent=gene-RM672_RS07350;Dbxref=GenBank:WP_311541376.1;Name=WP_311541376.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384837.1;locus_tag=RM672_RS07350;product=FecCD family ABC transporter permease;protein_id=WP_311541376.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 239632 239892 . - . ID=gene-RM672_RS07355;Name=RM672_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07355;old_locus_tag=RM672_07350 NZ_JAVRJS010000003.1 Protein Homology CDS 239632 239892 . - 0 ID=cds-WP_037574694.1;Parent=gene-RM672_RS07355;Dbxref=GenBank:WP_037574694.1;Name=WP_037574694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500896.1;locus_tag=RM672_RS07355;product=SunI/YnzG family protein;protein_id=WP_037574694.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 240080 240583 . + . ID=gene-RM672_RS07360;Name=RM672_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07360;old_locus_tag=RM672_07355 NZ_JAVRJS010000003.1 Protein Homology CDS 240080 240583 . + 0 ID=cds-WP_037574691.1;Parent=gene-RM672_RS07360;Dbxref=GenBank:WP_037574691.1;Name=WP_037574691.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=RM672_RS07360;product=metal-dependent hydrolase;protein_id=WP_037574691.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 240634 241824 . + . ID=gene-RM672_RS07365;Name=RM672_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07365;old_locus_tag=RM672_07360 NZ_JAVRJS010000003.1 Protein Homology CDS 240634 241824 . + 0 ID=cds-WP_037574688.1;Parent=gene-RM672_RS07365;Dbxref=GenBank:WP_037574688.1;Name=WP_037574688.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165085.1;locus_tag=RM672_RS07365;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_037574688.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 241835 242521 . + . ID=gene-RM672_RS07370;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=RM672_RS07370;old_locus_tag=RM672_07365 NZ_JAVRJS010000003.1 Protein Homology CDS 241835 242521 . + 0 ID=cds-WP_103159482.1;Parent=gene-RM672_RS07370;Dbxref=GenBank:WP_103159482.1;Name=WP_103159482.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=RM672_RS07370;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_103159482.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 242834 244168 . + . ID=gene-RM672_RS07375;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=RM672_RS07375;old_locus_tag=RM672_07370 NZ_JAVRJS010000003.1 Protein Homology CDS 242834 244168 . + 0 ID=cds-WP_103159481.1;Parent=gene-RM672_RS07375;Dbxref=GenBank:WP_103159481.1;Name=WP_103159481.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482666.1;locus_tag=RM672_RS07375;product=multidrug efflux MFS transporter SdrM;protein_id=WP_103159481.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 244209 244676 . + . ID=gene-RM672_RS07380;Name=RM672_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07380;old_locus_tag=RM672_07375 NZ_JAVRJS010000003.1 Protein Homology CDS 244209 244676 . + 0 ID=cds-WP_037574677.1;Parent=gene-RM672_RS07380;Dbxref=GenBank:WP_037574677.1;Name=WP_037574677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426405.1;locus_tag=RM672_RS07380;product=SepA family multidrug efflux transporter;protein_id=WP_037574677.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 245022 246458 . + . ID=gene-RM672_RS07385;Name=RM672_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07385;old_locus_tag=RM672_07380 NZ_JAVRJS010000003.1 Protein Homology CDS 245022 246458 . + 0 ID=cds-WP_311542478.1;Parent=gene-RM672_RS07385;Dbxref=GenBank:WP_311542478.1;Name=WP_311542478.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384823.1;locus_tag=RM672_RS07385;product=MDR family MFS transporter;protein_id=WP_311542478.1;transl_table=11 NZ_JAVRJS010000003.1 RefSeq gene 246551 247615 . + . ID=gene-RM672_RS07390;Name=salA;gbkey=Gene;gene=salA;gene_biotype=protein_coding;locus_tag=RM672_RS07390;old_locus_tag=RM672_07385 NZ_JAVRJS010000003.1 Protein Homology CDS 246551 247615 . + 0 ID=cds-WP_311542480.1;Parent=gene-RM672_RS07390;Dbxref=GenBank:WP_311542480.1;Name=WP_311542480.1;gbkey=CDS;gene=salA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=RM672_RS07390;product=iron-sulfur carrier protein/transcriptional regulator SalA;protein_id=WP_311542480.1;transl_table=11 ##sequence-region NZ_JAVRJS010000004.1 1 233228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000004.1 RefSeq region 1 233228 . + . ID=NZ_JAVRJS010000004.1:1..233228;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000004.1 RefSeq gene 353 949 . - . ID=gene-RM672_RS07395;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=RM672_RS07395;old_locus_tag=RM672_07390 NZ_JAVRJS010000004.1 Protein Homology CDS 353 949 . - 0 ID=cds-WP_037577434.1;Parent=gene-RM672_RS07395;Dbxref=GenBank:WP_037577434.1;Name=WP_037577434.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=RM672_RS07395;product=recombination mediator RecR;protein_id=WP_037577434.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 951 1271 . - . ID=gene-RM672_RS07400;Name=RM672_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07400;old_locus_tag=RM672_07395 NZ_JAVRJS010000004.1 Protein Homology CDS 951 1271 . - 0 ID=cds-WP_037564914.1;Parent=gene-RM672_RS07400;Dbxref=GenBank:WP_037564914.1;Name=WP_037564914.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=RM672_RS07400;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_037564914.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 1381 3069 . - . ID=gene-RM672_RS07405;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=RM672_RS07405;old_locus_tag=RM672_07400 NZ_JAVRJS010000004.1 Protein Homology CDS 1381 3069 . - 0 ID=cds-WP_311541401.1;Parent=gene-RM672_RS07405;Dbxref=GenBank:WP_311541401.1;Name=WP_311541401.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=RM672_RS07405;product=DNA polymerase III subunit gamma/tau;protein_id=WP_311541401.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 3135 3668 . - . ID=gene-RM672_RS07410;Name=RM672_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07410;old_locus_tag=RM672_07405 NZ_JAVRJS010000004.1 Protein Homology CDS 3135 3668 . - 0 ID=cds-WP_037577441.1;Parent=gene-RM672_RS07410;Dbxref=GenBank:WP_037577441.1;Name=WP_037577441.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=RM672_RS07410;product=GNAT family N-acetyltransferase;protein_id=WP_037577441.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 3848 4117 . - . ID=gene-RM672_RS07415;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=RM672_RS07415;old_locus_tag=RM672_07410 NZ_JAVRJS010000004.1 cmsearch SRP_RNA 3848 4117 . - . ID=rna-RM672_RS07415;Parent=gene-RM672_RS07415;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS07415;product=signal recognition particle sRNA large type NZ_JAVRJS010000004.1 cmsearch exon 3848 4117 . - . ID=exon-RM672_RS07415-1;Parent=rna-RM672_RS07415;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM672_RS07415;product=signal recognition particle sRNA large type NZ_JAVRJS010000004.1 RefSeq gene 4211 4936 . - . ID=gene-RM672_RS07420;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=RM672_RS07420;old_locus_tag=RM672_07415 NZ_JAVRJS010000004.1 Protein Homology CDS 4211 4936 . - 0 ID=cds-WP_103158696.1;Parent=gene-RM672_RS07420;Dbxref=GenBank:WP_103158696.1;Name=WP_103158696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303885.1;locus_tag=RM672_RS07420;product=trehalose operon repressor;protein_id=WP_103158696.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 4952 6592 . - . ID=gene-RM672_RS07425;Name=RM672_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07425;old_locus_tag=RM672_07420 NZ_JAVRJS010000004.1 Protein Homology CDS 4952 6592 . - 0 ID=cds-WP_103158697.1;Parent=gene-RM672_RS07425;Dbxref=GenBank:WP_103158697.1;Name=WP_103158697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454507.1;locus_tag=RM672_RS07425;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_103158697.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 6609 8045 . - . ID=gene-RM672_RS07430;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=RM672_RS07430;old_locus_tag=RM672_07425 NZ_JAVRJS010000004.1 Protein Homology CDS 6609 8045 . - 0 ID=cds-WP_103158698.1;Parent=gene-RM672_RS07430;Dbxref=GenBank:WP_103158698.1;Name=WP_103158698.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279382.1;locus_tag=RM672_RS07430;product=PTS system trehalose-specific EIIBC component;protein_id=WP_103158698.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 8346 8516 . - . ID=gene-RM672_RS07435;Name=RM672_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07435;old_locus_tag=RM672_07430 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 8346 8516 . - 0 ID=cds-WP_157946214.1;Parent=gene-RM672_RS07435;Dbxref=GenBank:WP_157946214.1;Name=WP_157946214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07435;product=hypothetical protein;protein_id=WP_157946214.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 8629 8721 . - . ID=gene-RM672_RS07440;Name=RM672_RS07440;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS07440;old_locus_tag=RM672_07435 NZ_JAVRJS010000004.1 tRNAscan-SE tRNA 8629 8721 . - . ID=rna-RM672_RS07440;Parent=gene-RM672_RS07440;anticodon=(pos:complement(8683..8685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS07440;product=tRNA-Ser NZ_JAVRJS010000004.1 tRNAscan-SE exon 8629 8721 . - . ID=exon-RM672_RS07440-1;Parent=rna-RM672_RS07440;anticodon=(pos:complement(8683..8685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS07440;product=tRNA-Ser NZ_JAVRJS010000004.1 RefSeq gene 8788 10245 . - . ID=gene-RM672_RS07445;Name=RM672_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07445;old_locus_tag=RM672_07440 NZ_JAVRJS010000004.1 Protein Homology CDS 8788 10245 . - 0 ID=cds-WP_103158699.1;Parent=gene-RM672_RS07445;Dbxref=GenBank:WP_103158699.1;Name=WP_103158699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445259.1;locus_tag=RM672_RS07445;product=glutamate synthase subunit beta;protein_id=WP_103158699.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 10259 14764 . - . ID=gene-RM672_RS07450;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=RM672_RS07450;old_locus_tag=RM672_07445 NZ_JAVRJS010000004.1 Protein Homology CDS 10259 14764 . - 0 ID=cds-WP_103158700.1;Parent=gene-RM672_RS07450;Dbxref=GenBank:WP_103158700.1;Name=WP_103158700.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=RM672_RS07450;product=glutamate synthase large subunit;protein_id=WP_103158700.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 14888 15763 . + . ID=gene-RM672_RS07455;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=RM672_RS07455;old_locus_tag=RM672_07450 NZ_JAVRJS010000004.1 Protein Homology CDS 14888 15763 . + 0 ID=cds-WP_103158701.1;Parent=gene-RM672_RS07455;Dbxref=GenBank:WP_103158701.1;Name=WP_103158701.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=RM672_RS07455;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_103158701.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 15776 16888 . + . ID=gene-RM672_RS07460;Name=RM672_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07460;old_locus_tag=RM672_07455 NZ_JAVRJS010000004.1 Protein Homology CDS 15776 16888 . + 0 ID=cds-WP_103158702.1;Parent=gene-RM672_RS07460;Dbxref=GenBank:WP_103158702.1;Name=WP_103158702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469651.1;locus_tag=RM672_RS07460;product=YibE/F family protein;protein_id=WP_103158702.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 16885 17715 . + . ID=gene-RM672_RS07465;Name=RM672_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07465;old_locus_tag=RM672_07460 NZ_JAVRJS010000004.1 Protein Homology CDS 16885 17715 . + 0 ID=cds-WP_105965630.1;Parent=gene-RM672_RS07465;Dbxref=GenBank:WP_105965630.1;Name=WP_105965630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=RM672_RS07465;product=YibE/F family protein;protein_id=WP_105965630.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 17708 19969 . + . ID=gene-RM672_RS07470;Name=RM672_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07470;old_locus_tag=RM672_07465 NZ_JAVRJS010000004.1 Protein Homology CDS 17708 19969 . + 0 ID=cds-WP_311540390.1;Parent=gene-RM672_RS07470;Dbxref=GenBank:WP_311540390.1;Name=WP_311540390.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466595.1;locus_tag=RM672_RS07470;product=ATP-binding cassette domain-containing protein;protein_id=WP_311540390.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 20034 20543 . - . ID=gene-RM672_RS07475;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM672_RS07475;old_locus_tag=RM672_07470 NZ_JAVRJS010000004.1 Protein Homology CDS 20034 20543 . - 0 ID=cds-WP_311540389.1;Parent=gene-RM672_RS07475;Dbxref=GenBank:WP_311540389.1;Name=WP_311540389.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=RM672_RS07475;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_311540389.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 20769 21041 . + . ID=gene-RM672_RS07480;Name=RM672_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07480;old_locus_tag=RM672_07475 NZ_JAVRJS010000004.1 Protein Homology CDS 20769 21041 . + 0 ID=cds-WP_037575566.1;Parent=gene-RM672_RS07480;Dbxref=GenBank:WP_037575566.1;Name=WP_037575566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425611.1;locus_tag=RM672_RS07480;product=hypothetical protein;protein_id=WP_037575566.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 21278 21889 . - . ID=gene-RM672_RS07485;Name=RM672_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07485;old_locus_tag=RM672_07480 NZ_JAVRJS010000004.1 Protein Homology CDS 21278 21889 . - 0 ID=cds-WP_311540683.1;Parent=gene-RM672_RS07485;Dbxref=GenBank:WP_311540683.1;Name=WP_311540683.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425612.1;locus_tag=RM672_RS07485;product=TetR/AcrR family transcriptional regulator;protein_id=WP_311540683.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 22034 23281 . + . ID=gene-RM672_RS07490;Name=RM672_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07490;old_locus_tag=RM672_07485 NZ_JAVRJS010000004.1 Protein Homology CDS 22034 23281 . + 0 ID=cds-WP_311540682.1;Parent=gene-RM672_RS07490;Dbxref=GenBank:WP_311540682.1;Name=WP_311540682.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM672_RS07490;product=YhgE/Pip domain-containing protein;protein_id=WP_311540682.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 23343 24347 . - . ID=gene-RM672_RS07495;Name=RM672_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07495;old_locus_tag=RM672_07490 NZ_JAVRJS010000004.1 Protein Homology CDS 23343 24347 . - 0 ID=cds-WP_311539325.1;Parent=gene-RM672_RS07495;Dbxref=GenBank:WP_311539325.1;Name=WP_311539325.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170274.1;locus_tag=RM672_RS07495;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311539325.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 24641 25780 . - . ID=gene-RM672_RS07500;Name=RM672_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07500;old_locus_tag=RM672_07495 NZ_JAVRJS010000004.1 Protein Homology CDS 24641 25780 . - 0 ID=cds-WP_105963494.1;Parent=gene-RM672_RS07500;Dbxref=GenBank:WP_105963494.1;Name=WP_105963494.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482209.1;locus_tag=RM672_RS07500;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_105963494.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 25773 26684 . - . ID=gene-RM672_RS07505;Name=RM672_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07505;old_locus_tag=RM672_07500 NZ_JAVRJS010000004.1 Protein Homology CDS 25773 26684 . - 0 ID=cds-WP_311539326.1;Parent=gene-RM672_RS07505;Dbxref=GenBank:WP_311539326.1;Name=WP_311539326.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016913052.1;locus_tag=RM672_RS07505;product=PLP-dependent cysteine synthase family protein;protein_id=WP_311539326.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 26838 27260 . + . ID=gene-RM672_RS07510;Name=RM672_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07510;old_locus_tag=RM672_07505 NZ_JAVRJS010000004.1 Protein Homology CDS 26838 27260 . + 0 ID=cds-WP_105996848.1;Parent=gene-RM672_RS07510;Dbxref=GenBank:WP_105996848.1;Name=WP_105996848.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007203936.1;locus_tag=RM672_RS07510;product=GNAT family N-acetyltransferase;protein_id=WP_105996848.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 27272 28609 . + . ID=gene-RM672_RS07515;Name=RM672_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07515;old_locus_tag=RM672_07510 NZ_JAVRJS010000004.1 Protein Homology CDS 27272 28609 . + 0 ID=cds-WP_311541400.1;Parent=gene-RM672_RS07515;Dbxref=GenBank:WP_311541400.1;Name=WP_311541400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425618.1;locus_tag=RM672_RS07515;product=carboxylesterase family protein;protein_id=WP_311541400.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 28702 30030 . - . ID=gene-RM672_RS07520;Name=RM672_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07520;old_locus_tag=RM672_07515 NZ_JAVRJS010000004.1 Protein Homology CDS 28702 30030 . - 0 ID=cds-WP_105963497.1;Parent=gene-RM672_RS07520;Dbxref=GenBank:WP_105963497.1;Name=WP_105963497.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898389.1;locus_tag=RM672_RS07520;product=sodium-dependent transporter;protein_id=WP_105963497.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 30243 31049 . - . ID=gene-RM672_RS07525;Name=RM672_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07525;old_locus_tag=RM672_07520 NZ_JAVRJS010000004.1 Protein Homology CDS 30243 31049 . - 0 ID=cds-WP_107370522.1;Parent=gene-RM672_RS07525;Dbxref=GenBank:WP_107370522.1;Name=WP_107370522.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728561.1;locus_tag=RM672_RS07525;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_107370522.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 31051 33675 . - . ID=gene-RM672_RS07530;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=RM672_RS07530;old_locus_tag=RM672_07525 NZ_JAVRJS010000004.1 Protein Homology CDS 31051 33675 . - 0 ID=cds-WP_107370521.1;Parent=gene-RM672_RS07530;Dbxref=GenBank:WP_107370521.1;Name=WP_107370521.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425622.1;locus_tag=RM672_RS07530;product=pyruvate%2C phosphate dikinase;protein_id=WP_107370521.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 33888 34739 . + . ID=gene-RM672_RS07535;Name=RM672_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07535;old_locus_tag=RM672_07530 NZ_JAVRJS010000004.1 Protein Homology CDS 33888 34739 . + 0 ID=cds-WP_105992312.1;Parent=gene-RM672_RS07535;Dbxref=GenBank:WP_105992312.1;Name=WP_105992312.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444161.1;locus_tag=RM672_RS07535;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_105992312.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 35054 35392 . - . ID=gene-RM672_RS11430;Name=RM672_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11430 NZ_JAVRJS010000004.1 Protein Homology CDS 35054 35392 . - 0 ID=cds-WP_338323073.1;Parent=gene-RM672_RS11430;Dbxref=GenBank:WP_338323073.1;Name=WP_338323073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM672_RS11430;product=DUF5079 family protein;protein_id=WP_338323073.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 35797 36180 . - . ID=gene-RM672_RS07540;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=RM672_RS07540;old_locus_tag=RM672_07535 NZ_JAVRJS010000004.1 Protein Homology CDS 35797 36180 . - 0 ID=cds-WP_037575534.1;Parent=gene-RM672_RS07540;Dbxref=GenBank:WP_037575534.1;Name=WP_037575534.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=RM672_RS07540;product=aspartate 1-decarboxylase;protein_id=WP_037575534.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 36177 37034 . - . ID=gene-RM672_RS07545;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=RM672_RS07545;old_locus_tag=RM672_07540 NZ_JAVRJS010000004.1 Protein Homology CDS 36177 37034 . - 0 ID=cds-WP_103158714.1;Parent=gene-RM672_RS07545;Dbxref=GenBank:WP_103158714.1;Name=WP_103158714.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425625.1;locus_tag=RM672_RS07545;product=pantoate--beta-alanine ligase;protein_id=WP_103158714.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 37027 37839 . - . ID=gene-RM672_RS07550;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=RM672_RS07550;old_locus_tag=RM672_07545 NZ_JAVRJS010000004.1 Protein Homology CDS 37027 37839 . - 0 ID=cds-WP_105967322.1;Parent=gene-RM672_RS07550;Dbxref=GenBank:WP_105967322.1;Name=WP_105967322.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431941.1;locus_tag=RM672_RS07550;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_105967322.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 37906 38778 . + . ID=gene-RM672_RS07555;Name=RM672_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07555;old_locus_tag=RM672_07550 NZ_JAVRJS010000004.1 Protein Homology CDS 37906 38778 . + 0 ID=cds-WP_311540680.1;Parent=gene-RM672_RS07555;Dbxref=GenBank:WP_311540680.1;Name=WP_311540680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425627.1;locus_tag=RM672_RS07555;product=oxidoreductase;protein_id=WP_311540680.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 38802 39353 . - . ID=gene-RM672_RS07560;Name=RM672_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07560;old_locus_tag=RM672_07555 NZ_JAVRJS010000004.1 Protein Homology CDS 38802 39353 . - 0 ID=cds-WP_037575601.1;Parent=gene-RM672_RS07560;Dbxref=GenBank:WP_037575601.1;Name=WP_037575601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723305.1;locus_tag=RM672_RS07560;product=hypothetical protein;protein_id=WP_037575601.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 39431 39619 . - . ID=gene-RM672_RS07565;Name=RM672_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07565;old_locus_tag=RM672_07560 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 39431 39619 . - 0 ID=cds-WP_037575523.1;Parent=gene-RM672_RS07565;Dbxref=GenBank:WP_037575523.1;Name=WP_037575523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07565;product=hypothetical protein;protein_id=WP_037575523.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 39647 39961 . - . ID=gene-RM672_RS07570;Name=RM672_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07570;old_locus_tag=RM672_07565 NZ_JAVRJS010000004.1 Protein Homology CDS 39647 39961 . - 0 ID=cds-WP_037575519.1;Parent=gene-RM672_RS07570;Dbxref=GenBank:WP_037575519.1;Name=WP_037575519.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912747.1;locus_tag=RM672_RS07570;product=DMT family transporter;protein_id=WP_037575519.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 39962 40282 . - . ID=gene-RM672_RS07575;Name=RM672_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07575;old_locus_tag=RM672_07570 NZ_JAVRJS010000004.1 Protein Homology CDS 39962 40282 . - 0 ID=cds-WP_037575517.1;Parent=gene-RM672_RS07575;Dbxref=GenBank:WP_037575517.1;Name=WP_037575517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006903.1;locus_tag=RM672_RS07575;product=DMT family transporter;protein_id=WP_037575517.1;transl_table=11 NZ_JAVRJS010000004.1 cmsearch riboswitch 40332 40436 . - . ID=id-NZ_JAVRJS010000004.1:40332..40436;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00442,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000004.1 RefSeq gene 41122 42333 . - . ID=gene-RM672_RS07580;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=RM672_RS07580;old_locus_tag=RM672_07575 NZ_JAVRJS010000004.1 Protein Homology CDS 41122 42333 . - 0 ID=cds-WP_037575515.1;Parent=gene-RM672_RS07580;Dbxref=GenBank:WP_037575515.1;Name=WP_037575515.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005827923.1;locus_tag=RM672_RS07580;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_037575515.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 42348 43085 . - . ID=gene-RM672_RS07585;Name=RM672_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07585;old_locus_tag=RM672_07580 NZ_JAVRJS010000004.1 Protein Homology CDS 42348 43085 . - 0 ID=cds-WP_105967323.1;Parent=gene-RM672_RS07585;Dbxref=GenBank:WP_105967323.1;Name=WP_105967323.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=RM672_RS07585;product=ABC transporter ATP-binding protein;protein_id=WP_105967323.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 43079 43897 . - . ID=gene-RM672_RS07590;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=RM672_RS07590;old_locus_tag=RM672_07585 NZ_JAVRJS010000004.1 Protein Homology CDS 43079 43897 . - 0 ID=cds-WP_119505308.1;Parent=gene-RM672_RS07590;Dbxref=GenBank:WP_119505308.1;Name=WP_119505308.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=RM672_RS07590;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_119505308.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 43894 44760 . - . ID=gene-RM672_RS07595;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=RM672_RS07595;old_locus_tag=RM672_07590 NZ_JAVRJS010000004.1 Protein Homology CDS 43894 44760 . - 0 ID=cds-WP_105967325.1;Parent=gene-RM672_RS07595;Dbxref=GenBank:WP_105967325.1;Name=WP_105967325.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444882.1;locus_tag=RM672_RS07595;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_105967325.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 44761 45693 . - . ID=gene-RM672_RS07600;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=RM672_RS07600;old_locus_tag=RM672_07595 NZ_JAVRJS010000004.1 Protein Homology CDS 44761 45693 . - 0 ID=cds-WP_037575506.1;Parent=gene-RM672_RS07600;Dbxref=GenBank:WP_037575506.1;Name=WP_037575506.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425637.1;locus_tag=RM672_RS07600;product=nickel/cobalt ABC transporter permease;protein_id=WP_037575506.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 45706 47304 . - . ID=gene-RM672_RS07605;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=RM672_RS07605;old_locus_tag=RM672_07600 NZ_JAVRJS010000004.1 Protein Homology CDS 45706 47304 . - 0 ID=cds-WP_103158720.1;Parent=gene-RM672_RS07605;Dbxref=GenBank:WP_103158720.1;Name=WP_103158720.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=RM672_RS07605;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_103158720.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 47334 48626 . - . ID=gene-RM672_RS07610;Name=RM672_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07610;old_locus_tag=RM672_07605 NZ_JAVRJS010000004.1 Protein Homology CDS 47334 48626 . - 0 ID=cds-WP_105967326.1;Parent=gene-RM672_RS07610;Dbxref=GenBank:WP_105967326.1;Name=WP_105967326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425639.1;locus_tag=RM672_RS07610;product=opine metallophore biosynthesis dehydrogenase;protein_id=WP_105967326.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 48623 49450 . - . ID=gene-RM672_RS07615;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=RM672_RS07615;old_locus_tag=RM672_07610 NZ_JAVRJS010000004.1 Protein Homology CDS 48623 49450 . - 0 ID=cds-WP_311541398.1;Parent=gene-RM672_RS07615;Dbxref=GenBank:WP_311541398.1;Name=WP_311541398.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444886.1;locus_tag=RM672_RS07615;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_311541398.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 49460 50269 . - . ID=gene-RM672_RS07620;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=RM672_RS07620;old_locus_tag=RM672_07615 NZ_JAVRJS010000004.1 Protein Homology CDS 49460 50269 . - 0 ID=cds-WP_105965616.1;Parent=gene-RM672_RS07620;Dbxref=GenBank:WP_105965616.1;Name=WP_105965616.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166931.1;locus_tag=RM672_RS07620;product=histidine racemase CntK;protein_id=WP_105965616.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 50521 51078 . + . ID=gene-RM672_RS07625;Name=RM672_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07625;old_locus_tag=RM672_07620 NZ_JAVRJS010000004.1 Protein Homology CDS 50521 51078 . + 0 ID=cds-WP_037575497.1;Parent=gene-RM672_RS07625;Dbxref=GenBank:WP_037575497.1;Name=WP_037575497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219731.1;locus_tag=RM672_RS07625;product=hypothetical protein;protein_id=WP_037575497.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 51121 51804 . - . ID=gene-RM672_RS07630;Name=RM672_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07630;old_locus_tag=RM672_07625 NZ_JAVRJS010000004.1 Protein Homology CDS 51121 51804 . - 0 ID=cds-WP_037575495.1;Parent=gene-RM672_RS07630;Dbxref=GenBank:WP_037575495.1;Name=WP_037575495.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190073.1;locus_tag=RM672_RS07630;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_037575495.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 51980 52522 . + . ID=gene-RM672_RS07635;Name=RM672_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07635;old_locus_tag=RM672_07630 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 51980 52522 . + 0 ID=cds-WP_133170499.1;Parent=gene-RM672_RS07635;Dbxref=GenBank:WP_133170499.1;Name=WP_133170499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07635;product=hypothetical protein;protein_id=WP_133170499.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 52566 54197 . - . ID=gene-RM672_RS07640;Name=RM672_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07640;old_locus_tag=RM672_07635 NZ_JAVRJS010000004.1 Protein Homology CDS 52566 54197 . - 0 ID=cds-WP_105963124.1;Parent=gene-RM672_RS07640;Dbxref=GenBank:WP_105963124.1;Name=WP_105963124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020344.7;locus_tag=RM672_RS07640;product=coagulase domain-containing protein;protein_id=WP_105963124.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 54754 55551 . - . ID=gene-RM672_RS07645;Name=RM672_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07645;old_locus_tag=RM672_07640 NZ_JAVRJS010000004.1 Protein Homology CDS 54754 55551 . - 0 ID=cds-WP_105963123.1;Parent=gene-RM672_RS07645;Dbxref=GenBank:WP_105963123.1;Name=WP_105963123.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=RM672_RS07645;product=trypsin-like serine peptidase;protein_id=WP_105963123.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 55853 56173 . - . ID=gene-RM672_RS07650;Name=RM672_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07650;old_locus_tag=RM672_07645 NZ_JAVRJS010000004.1 Protein Homology CDS 55853 56173 . - 0 ID=cds-WP_037575490.1;Parent=gene-RM672_RS07650;Dbxref=GenBank:WP_037575490.1;Name=WP_037575490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498730.1;locus_tag=RM672_RS07650;product=antibiotic biosynthesis monooxygenase;protein_id=WP_037575490.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 56326 56757 . - . ID=gene-RM672_RS07655;Name=RM672_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07655;old_locus_tag=RM672_07650 NZ_JAVRJS010000004.1 Protein Homology CDS 56326 56757 . - 0 ID=cds-WP_105963122.1;Parent=gene-RM672_RS07655;Dbxref=GenBank:WP_105963122.1;Name=WP_105963122.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425893.1;locus_tag=RM672_RS07655;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_105963122.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 56791 58134 . - . ID=gene-RM672_RS07660;Name=RM672_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07660;old_locus_tag=RM672_07655 NZ_JAVRJS010000004.1 Protein Homology CDS 56791 58134 . - 0 ID=cds-WP_105963121.1;Parent=gene-RM672_RS07660;Dbxref=GenBank:WP_105963121.1;Name=WP_105963121.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=RM672_RS07660;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_105963121.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 58269 58523 . + . ID=gene-RM672_RS07665;Name=RM672_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07665;old_locus_tag=RM672_07660 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 58269 58523 . + 0 ID=cds-WP_105965615.1;Parent=gene-RM672_RS07665;Dbxref=GenBank:WP_105965615.1;Name=WP_105965615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07665;product=hypothetical protein;protein_id=WP_105965615.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 58577 59995 . - . ID=gene-RM672_RS07670;Name=RM672_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07670;old_locus_tag=RM672_07665 NZ_JAVRJS010000004.1 Protein Homology CDS 58577 59995 . - 0 ID=cds-WP_311542481.1;Parent=gene-RM672_RS07670;Dbxref=GenBank:WP_311542481.1;Name=WP_311542481.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656283.1;locus_tag=RM672_RS07670;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_311542481.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 60024 60986 . - . ID=gene-RM672_RS07675;Name=RM672_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07675;old_locus_tag=RM672_07670 NZ_JAVRJS010000004.1 Protein Homology CDS 60024 60986 . - 0 ID=cds-WP_105963119.1;Parent=gene-RM672_RS07675;Dbxref=GenBank:WP_105963119.1;Name=WP_105963119.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461419.1;locus_tag=RM672_RS07675;product=carbohydrate kinase family protein;protein_id=WP_105963119.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 61095 62069 . - . ID=gene-RM672_RS07680;Name=RM672_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07680;old_locus_tag=RM672_07675 NZ_JAVRJS010000004.1 Protein Homology CDS 61095 62069 . - 0 ID=cds-WP_105963118.1;Parent=gene-RM672_RS07680;Dbxref=GenBank:WP_105963118.1;Name=WP_105963118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656280.1;locus_tag=RM672_RS07680;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_105963118.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 62757 63452 . + . ID=gene-RM672_RS07685;Name=RM672_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07685;old_locus_tag=RM672_07680 NZ_JAVRJS010000004.1 Protein Homology CDS 62757 63452 . + 0 ID=cds-WP_182470801.1;Parent=gene-RM672_RS07685;Dbxref=GenBank:WP_182470801.1;Name=WP_182470801.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416470.1;locus_tag=RM672_RS07685;product=NYN domain-containing protein;protein_id=WP_182470801.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 63546 65087 . - . ID=gene-RM672_RS07690;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=RM672_RS07690;old_locus_tag=RM672_07685 NZ_JAVRJS010000004.1 Protein Homology CDS 63546 65087 . - 0 ID=cds-WP_037575473.1;Parent=gene-RM672_RS07690;Dbxref=GenBank:WP_037575473.1;Name=WP_037575473.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=RM672_RS07690;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_037575473.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 65110 66576 . - . ID=gene-RM672_RS07695;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=RM672_RS07695;old_locus_tag=RM672_07690 NZ_JAVRJS010000004.1 Protein Homology CDS 65110 66576 . - 0 ID=cds-WP_037575470.1;Parent=gene-RM672_RS07695;Dbxref=GenBank:WP_037575470.1;Name=WP_037575470.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=RM672_RS07695;product=IMP dehydrogenase;protein_id=WP_037575470.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 66612 67880 . - . ID=gene-RM672_RS07700;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=RM672_RS07700;old_locus_tag=RM672_07695 NZ_JAVRJS010000004.1 Protein Homology CDS 66612 67880 . - 0 ID=cds-WP_037575467.1;Parent=gene-RM672_RS07700;Dbxref=GenBank:WP_037575467.1;Name=WP_037575467.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=RM672_RS07700;product=xanthine permease PbuX;protein_id=WP_037575467.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 67877 68461 . - . ID=gene-RM672_RS07705;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=RM672_RS07705;old_locus_tag=RM672_07700 NZ_JAVRJS010000004.1 Protein Homology CDS 67877 68461 . - 0 ID=cds-WP_037575465.1;Parent=gene-RM672_RS07705;Dbxref=GenBank:WP_037575465.1;Name=WP_037575465.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480340.1;locus_tag=RM672_RS07705;product=xanthine phosphoribosyltransferase;protein_id=WP_037575465.1;transl_table=11 NZ_JAVRJS010000004.1 cmsearch riboswitch 68708 68810 . - . ID=id-NZ_JAVRJS010000004.1:68708..68810;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00167,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000004.1 RefSeq gene 69054 69464 . + . ID=gene-RM672_RS07710;Name=RM672_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07710;old_locus_tag=RM672_07705 NZ_JAVRJS010000004.1 Protein Homology CDS 69054 69464 . + 0 ID=cds-WP_037575461.1;Parent=gene-RM672_RS07710;Dbxref=GenBank:WP_037575461.1;Name=WP_037575461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=RM672_RS07710;product=general stress protein;protein_id=WP_037575461.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 69711 70385 . + . ID=gene-RM672_RS07715;Name=RM672_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07715;old_locus_tag=RM672_07710 NZ_JAVRJS010000004.1 Protein Homology CDS 69711 70385 . + 0 ID=cds-WP_037575458.1;Parent=gene-RM672_RS07715;Dbxref=GenBank:WP_037575458.1;Name=WP_037575458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=RM672_RS07715;product=hypothetical protein;protein_id=WP_037575458.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 70498 71100 . + . ID=gene-RM672_RS07720;Name=RM672_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07720;old_locus_tag=RM672_07715 NZ_JAVRJS010000004.1 Protein Homology CDS 70498 71100 . + 0 ID=cds-WP_037575455.1;Parent=gene-RM672_RS07720;Dbxref=GenBank:WP_037575455.1;Name=WP_037575455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=RM672_RS07720;product=hypothetical protein;protein_id=WP_037575455.1;transl_table=11 NZ_JAVRJS010000004.1 cmsearch riboswitch 71122 71224 . + . ID=id-NZ_JAVRJS010000004.1:71122..71224;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000004.1 RefSeq gene 71330 72496 . + . ID=gene-RM672_RS07725;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=RM672_RS07725;old_locus_tag=RM672_07720 NZ_JAVRJS010000004.1 Protein Homology CDS 71330 72496 . + 0 ID=cds-WP_311540671.1;Parent=gene-RM672_RS07725;Dbxref=GenBank:WP_311540671.1;Name=WP_311540671.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=RM672_RS07725;product=glycine oxidase ThiO;protein_id=WP_311540671.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 72514 73905 . + . ID=gene-RM672_RS07730;Name=RM672_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07730;old_locus_tag=RM672_07725 NZ_JAVRJS010000004.1 Protein Homology CDS 72514 73905 . + 0 ID=cds-WP_103158651.1;Parent=gene-RM672_RS07730;Dbxref=GenBank:WP_103158651.1;Name=WP_103158651.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=RM672_RS07730;product=L-cystine transporter;protein_id=WP_103158651.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 74028 74783 . - . ID=gene-RM672_RS07735;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=RM672_RS07735;old_locus_tag=RM672_07730 NZ_JAVRJS010000004.1 Protein Homology CDS 74028 74783 . - 0 ID=cds-WP_037575446.1;Parent=gene-RM672_RS07735;Dbxref=GenBank:WP_037575446.1;Name=WP_037575446.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303929.1;locus_tag=RM672_RS07735;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_037575446.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 74927 75703 . + . ID=gene-RM672_RS07740;Name=RM672_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07740;old_locus_tag=RM672_07735 NZ_JAVRJS010000004.1 Protein Homology CDS 74927 75703 . + 0 ID=cds-WP_037575444.1;Parent=gene-RM672_RS07740;Dbxref=GenBank:WP_037575444.1;Name=WP_037575444.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472380.1;locus_tag=RM672_RS07740;product=2-keto-4-pentenoate hydratase;protein_id=WP_037575444.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 76075 76644 . + . ID=gene-RM672_RS07745;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=RM672_RS07745;old_locus_tag=RM672_07740 NZ_JAVRJS010000004.1 Protein Homology CDS 76075 76644 . + 0 ID=cds-WP_037575442.1;Parent=gene-RM672_RS07745;Dbxref=GenBank:WP_037575442.1;Name=WP_037575442.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=RM672_RS07745;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_037575442.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 76891 78414 . + . ID=gene-RM672_RS07750;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=RM672_RS07750;old_locus_tag=RM672_07745 NZ_JAVRJS010000004.1 Protein Homology CDS 76891 78414 . + 0 ID=cds-WP_165806054.1;Parent=gene-RM672_RS07750;Dbxref=GenBank:WP_165806054.1;Name=WP_165806054.1;Ontology_term=GO:0000302,GO:0050660,GO:0051287,GO:0102039;gbkey=CDS;gene=ahpF;go_function=flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA,NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930502.1;locus_tag=RM672_RS07750;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_165806054.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 78646 79119 . + . ID=gene-RM672_RS07755;Name=RM672_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07755;old_locus_tag=RM672_07750 NZ_JAVRJS010000004.1 Protein Homology CDS 78646 79119 . + 0 ID=cds-WP_037575435.1;Parent=gene-RM672_RS07755;Dbxref=GenBank:WP_037575435.1;Name=WP_037575435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723560.1;locus_tag=RM672_RS07755;product=hypothetical protein;protein_id=WP_037575435.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 79179 80129 . - . ID=gene-RM672_RS07760;Name=RM672_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07760;old_locus_tag=RM672_07755 NZ_JAVRJS010000004.1 Protein Homology CDS 79179 80129 . - 0 ID=cds-WP_037575432.1;Parent=gene-RM672_RS07760;Dbxref=GenBank:WP_037575432.1;Name=WP_037575432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=RM672_RS07760;product=DUF1002 domain-containing protein;protein_id=WP_037575432.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 80290 81282 . - . ID=gene-RM672_RS07765;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=RM672_RS07765;old_locus_tag=RM672_07760 NZ_JAVRJS010000004.1 Protein Homology CDS 80290 81282 . - 0 ID=cds-WP_037575430.1;Parent=gene-RM672_RS07765;Dbxref=GenBank:WP_037575430.1;Name=WP_037575430.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=RM672_RS07765;product=biotin synthase BioB;protein_id=WP_037575430.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 81443 82114 . - . ID=gene-RM672_RS07770;Name=RM672_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07770;old_locus_tag=RM672_07765 NZ_JAVRJS010000004.1 Protein Homology CDS 81443 82114 . - 0 ID=cds-WP_051604981.1;Parent=gene-RM672_RS07770;Dbxref=GenBank:WP_051604981.1;Name=WP_051604981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.7;locus_tag=RM672_RS07770;product=PepSY domain-containing protein;protein_id=WP_051604981.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 82098 83468 . - . ID=gene-RM672_RS07775;Name=RM672_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07775;old_locus_tag=RM672_07770 NZ_JAVRJS010000004.1 Protein Homology CDS 82098 83468 . - 0 ID=cds-WP_037575427.1;Parent=gene-RM672_RS07775;Dbxref=GenBank:WP_037575427.1;Name=WP_037575427.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381579.1;locus_tag=RM672_RS07775;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_037575427.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 83473 84150 . - . ID=gene-RM672_RS07780;Name=RM672_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07780;old_locus_tag=RM672_07775 NZ_JAVRJS010000004.1 Protein Homology CDS 83473 84150 . - 0 ID=cds-WP_037575423.1;Parent=gene-RM672_RS07780;Dbxref=GenBank:WP_037575423.1;Name=WP_037575423.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511690.1;locus_tag=RM672_RS07780;product=response regulator transcription factor;protein_id=WP_037575423.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 84160 85551 . - . ID=gene-RM672_RS07785;Name=RM672_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07785;old_locus_tag=RM672_07780 NZ_JAVRJS010000004.1 Protein Homology CDS 84160 85551 . - 0 ID=cds-WP_311540670.1;Parent=gene-RM672_RS07785;Dbxref=GenBank:WP_311540670.1;Name=WP_311540670.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381576.1;locus_tag=RM672_RS07785;product=SLC13 family permease;protein_id=WP_311540670.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 85541 86761 . - . ID=gene-RM672_RS07790;Name=RM672_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07790;old_locus_tag=RM672_07785 NZ_JAVRJS010000004.1 Protein Homology CDS 85541 86761 . - 0 ID=cds-WP_051604979.1;Parent=gene-RM672_RS07790;Dbxref=GenBank:WP_051604979.1;Name=WP_051604979.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176585.1;locus_tag=RM672_RS07790;product=glycerate kinase family protein;protein_id=WP_051604979.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 86881 88038 . - . ID=gene-RM672_RS07795;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=RM672_RS07795;old_locus_tag=RM672_07790 NZ_JAVRJS010000004.1 Protein Homology CDS 86881 88038 . - 0 ID=cds-WP_105963090.1;Parent=gene-RM672_RS07795;Dbxref=GenBank:WP_105963090.1;Name=WP_105963090.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383282.1;locus_tag=RM672_RS07795;product=chromate efflux transporter;protein_id=WP_105963090.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 88049 88351 . - . ID=gene-RM672_RS07800;Name=RM672_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07800;old_locus_tag=RM672_07795 NZ_JAVRJS010000004.1 Protein Homology CDS 88049 88351 . - 0 ID=cds-WP_037575417.1;Parent=gene-RM672_RS07800;Dbxref=GenBank:WP_037575417.1;Name=WP_037575417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506400.1;locus_tag=RM672_RS07800;product=PadR family transcriptional regulator;protein_id=WP_037575417.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 88513 88893 . + . ID=gene-RM672_RS07805;Name=RM672_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07805;old_locus_tag=RM672_07800 NZ_JAVRJS010000004.1 Protein Homology CDS 88513 88893 . + 0 ID=cds-WP_037575414.1;Parent=gene-RM672_RS07805;Dbxref=GenBank:WP_037575414.1;Name=WP_037575414.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=RM672_RS07805;product=iron chaperone;protein_id=WP_037575414.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 88984 89466 . - . ID=gene-RM672_RS07810;Name=RM672_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07810;old_locus_tag=RM672_07805 NZ_JAVRJS010000004.1 Protein Homology CDS 88984 89466 . - 0 ID=cds-WP_311539343.1;Parent=gene-RM672_RS07810;Dbxref=GenBank:WP_311539343.1;Name=WP_311539343.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM672_RS07810;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311539343.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 89807 90049 . - . ID=gene-RM672_RS07815;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=RM672_RS07815;old_locus_tag=RM672_07810 NZ_JAVRJS010000004.1 Protein Homology CDS 89807 90049 . - 0 ID=cds-WP_037565082.1;Parent=gene-RM672_RS07815;Dbxref=GenBank:WP_037565082.1;Name=WP_037565082.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=RM672_RS07815;product=30S ribosomal protein S18;protein_id=WP_037565082.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 90092 90595 . - . ID=gene-RM672_RS07820;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM672_RS07820;old_locus_tag=RM672_07815 NZ_JAVRJS010000004.1 Protein Homology CDS 90092 90595 . - 0 ID=cds-WP_037575408.1;Parent=gene-RM672_RS07820;Dbxref=GenBank:WP_037575408.1;Name=WP_037575408.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=RM672_RS07820;product=single-stranded DNA-binding protein;protein_id=WP_037575408.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 90619 90915 . - . ID=gene-RM672_RS07825;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=RM672_RS07825;old_locus_tag=RM672_07820 NZ_JAVRJS010000004.1 Protein Homology CDS 90619 90915 . - 0 ID=cds-WP_037565086.1;Parent=gene-RM672_RS07825;Dbxref=GenBank:WP_037565086.1;Name=WP_037565086.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=RM672_RS07825;product=30S ribosomal protein S6;protein_id=WP_037565086.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 91228 91863 . + . ID=gene-RM672_RS07830;Name=RM672_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07830;old_locus_tag=RM672_07825 NZ_JAVRJS010000004.1 Protein Homology CDS 91228 91863 . + 0 ID=cds-WP_311539344.1;Parent=gene-RM672_RS07830;Dbxref=GenBank:WP_311539344.1;Name=WP_311539344.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019244338.1;locus_tag=RM672_RS07830;product=NAD(P)-dependent oxidoreductase;protein_id=WP_311539344.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 92070 93167 . - . ID=gene-RM672_RS07835;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=RM672_RS07835;old_locus_tag=RM672_07830 NZ_JAVRJS010000004.1 Protein Homology CDS 92070 93167 . - 0 ID=cds-WP_037575402.1;Parent=gene-RM672_RS07835;Dbxref=GenBank:WP_037575402.1;Name=WP_037575402.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=RM672_RS07835;product=redox-regulated ATPase YchF;protein_id=WP_037575402.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 93174 93380 . - . ID=gene-RM672_RS07840;Name=RM672_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07840;old_locus_tag=RM672_07835 NZ_JAVRJS010000004.1 Protein Homology CDS 93174 93380 . - 0 ID=cds-WP_037575399.1;Parent=gene-RM672_RS07840;Dbxref=GenBank:WP_037575399.1;Name=WP_037575399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383300.1;locus_tag=RM672_RS07840;product=DUF951 domain-containing protein;protein_id=WP_037575399.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 93416 94306 . - . ID=gene-RM672_RS07845;Name=RM672_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07845;old_locus_tag=RM672_07840 NZ_JAVRJS010000004.1 Protein Homology CDS 93416 94306 . - 0 ID=cds-WP_037575395.1;Parent=gene-RM672_RS07845;Dbxref=GenBank:WP_037575395.1;Name=WP_037575395.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479237.1;locus_tag=RM672_RS07845;product=mechanosensitive ion channel family protein;protein_id=WP_037575395.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 94330 95157 . - . ID=gene-RM672_RS07850;Name=RM672_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07850;old_locus_tag=RM672_07845 NZ_JAVRJS010000004.1 Protein Homology CDS 94330 95157 . - 0 ID=cds-WP_037575392.1;Parent=gene-RM672_RS07850;Dbxref=GenBank:WP_037575392.1;Name=WP_037575392.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480309.1;locus_tag=RM672_RS07850;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_037575392.1;transl_table=11 NZ_JAVRJS010000004.1 cmsearch binding_site 95344 95641 . + . ID=id-NZ_JAVRJS010000004.1:95344..95641;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000004.1 RefSeq gene 95756 96859 . + . ID=gene-RM672_RS07855;Name=RM672_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07855;old_locus_tag=RM672_07850 NZ_JAVRJS010000004.1 Protein Homology CDS 95756 96859 . + 0 ID=cds-WP_037575389.1;Parent=gene-RM672_RS07855;Dbxref=GenBank:WP_037575389.1;Name=WP_037575389.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723610.1;locus_tag=RM672_RS07855;product=PLP-dependent transferase;protein_id=WP_037575389.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 96856 98031 . + . ID=gene-RM672_RS07860;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=RM672_RS07860;old_locus_tag=RM672_07855 NZ_JAVRJS010000004.1 Protein Homology CDS 96856 98031 . + 0 ID=cds-WP_105965997.1;Parent=gene-RM672_RS07860;Dbxref=GenBank:WP_105965997.1;Name=WP_105965997.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425702.1;locus_tag=RM672_RS07860;product=cystathionine beta-lyase MetC;protein_id=WP_105965997.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 97985 99826 . + . ID=gene-RM672_RS07865;Name=RM672_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07865;old_locus_tag=RM672_07860 NZ_JAVRJS010000004.1 Protein Homology CDS 97985 99826 . + 0 ID=cds-WP_311539346.1;Parent=gene-RM672_RS07865;Dbxref=GenBank:WP_311539346.1;Name=WP_311539346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=RM672_RS07865;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_311539346.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 99820 102066 . + . ID=gene-RM672_RS07870;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=RM672_RS07870;old_locus_tag=RM672_07865 NZ_JAVRJS010000004.1 Protein Homology CDS 99820 102066 . + 0 ID=cds-WP_311539404.1;Parent=gene-RM672_RS07870;Dbxref=GenBank:WP_311539404.1;Name=WP_311539404.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445124.1;locus_tag=RM672_RS07870;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_311539404.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 102215 102448 . + . ID=gene-RM672_RS07875;Name=RM672_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07875;old_locus_tag=RM672_07870 NZ_JAVRJS010000004.1 Protein Homology CDS 102215 102448 . + 0 ID=cds-WP_037575378.1;Parent=gene-RM672_RS07875;Dbxref=GenBank:WP_037575378.1;Name=WP_037575378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024461.8;locus_tag=RM672_RS07875;product=DUF3923 family protein;protein_id=WP_037575378.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 102493 103110 . + . ID=gene-RM672_RS07880;Name=RM672_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07880;old_locus_tag=RM672_07875 NZ_JAVRJS010000004.1 Protein Homology CDS 102493 103110 . + 0 ID=cds-WP_182474563.1;Parent=gene-RM672_RS07880;Dbxref=GenBank:WP_182474563.1;Name=WP_182474563.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615895.1;locus_tag=RM672_RS07880;product=LysE/ArgO family amino acid transporter;protein_id=WP_182474563.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 103213 104046 . - . ID=gene-RM672_RS07885;Name=RM672_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07885;old_locus_tag=RM672_07880 NZ_JAVRJS010000004.1 Protein Homology CDS 103213 104046 . - 0 ID=cds-WP_103158633.1;Parent=gene-RM672_RS07885;Dbxref=GenBank:WP_103158633.1;Name=WP_103158633.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=RM672_RS07885;product=urease accessory protein UreD;protein_id=WP_103158633.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 104048 104659 . - . ID=gene-RM672_RS07890;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=RM672_RS07890;old_locus_tag=RM672_07885 NZ_JAVRJS010000004.1 Protein Homology CDS 104048 104659 . - 0 ID=cds-WP_037575375.1;Parent=gene-RM672_RS07890;Dbxref=GenBank:WP_037575375.1;Name=WP_037575375.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166031.1;locus_tag=RM672_RS07890;product=urease accessory protein UreG;protein_id=WP_037575375.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 104671 105360 . - . ID=gene-RM672_RS07895;Name=RM672_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07895;old_locus_tag=RM672_07890 NZ_JAVRJS010000004.1 Protein Homology CDS 104671 105360 . - 0 ID=cds-WP_037575373.1;Parent=gene-RM672_RS07895;Dbxref=GenBank:WP_037575373.1;Name=WP_037575373.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=RM672_RS07895;product=urease accessory protein UreF;protein_id=WP_037575373.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 105353 105805 . - . ID=gene-RM672_RS07900;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=RM672_RS07900;old_locus_tag=RM672_07895 NZ_JAVRJS010000004.1 Protein Homology CDS 105353 105805 . - 0 ID=cds-WP_037575371.1;Parent=gene-RM672_RS07900;Dbxref=GenBank:WP_037575371.1;Name=WP_037575371.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=RM672_RS07900;product=urease accessory protein UreE;protein_id=WP_037575371.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 105986 107446 . - . ID=gene-RM672_RS07905;Name=RM672_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07905;old_locus_tag=RM672_07900 NZ_JAVRJS010000004.1 Protein Homology CDS 105986 107446 . - 0 ID=cds-WP_105967341.1;Parent=gene-RM672_RS07905;Dbxref=GenBank:WP_105967341.1;Name=WP_105967341.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999193.1;locus_tag=RM672_RS07905;product=carbon starvation CstA family protein;protein_id=WP_105967341.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 107823 108338 . + . ID=gene-RM672_RS07910;Name=RM672_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07910;old_locus_tag=RM672_07905 NZ_JAVRJS010000004.1 Protein Homology CDS 107823 108338 . + 0 ID=cds-WP_037575365.1;Parent=gene-RM672_RS07910;Dbxref=GenBank:WP_037575365.1;Name=WP_037575365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479056.1;locus_tag=RM672_RS07910;product=YceI family protein;protein_id=WP_037575365.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 108476 109390 . + . ID=gene-RM672_RS07915;Name=RM672_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07915;old_locus_tag=RM672_07910 NZ_JAVRJS010000004.1 Protein Homology CDS 108476 109390 . + 0 ID=cds-WP_136732077.1;Parent=gene-RM672_RS07915;Dbxref=GenBank:WP_136732077.1;Name=WP_136732077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220252.1;locus_tag=RM672_RS07915;product=DUF5996 family protein;protein_id=WP_136732077.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 109702 110910 . - . ID=gene-RM672_RS07920;Name=RM672_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07920;old_locus_tag=RM672_07915 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 109702 110910 . - 0 ID=cds-WP_105963074.1;Parent=gene-RM672_RS07920;Dbxref=GenBank:WP_105963074.1;Name=WP_105963074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS07920;product=hypothetical protein;protein_id=WP_105963074.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 110934 111212 . - . ID=gene-RM672_RS07925;Name=RM672_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07925;old_locus_tag=RM672_07920 NZ_JAVRJS010000004.1 Protein Homology CDS 110934 111212 . - 0 ID=cds-WP_103158628.1;Parent=gene-RM672_RS07925;Dbxref=GenBank:WP_103158628.1;Name=WP_103158628.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425884.1;locus_tag=RM672_RS07925;product=GNAT family N-acetyltransferase;protein_id=WP_103158628.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 111451 111984 . + . ID=gene-RM672_RS07930;Name=RM672_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07930;old_locus_tag=RM672_07925 NZ_JAVRJS010000004.1 Protein Homology CDS 111451 111984 . + 0 ID=cds-WP_103159132.1;Parent=gene-RM672_RS07930;Dbxref=GenBank:WP_103159132.1;Name=WP_103159132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425888.1;locus_tag=RM672_RS07930;product=DoxX family membrane protein;protein_id=WP_103159132.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 112028 113041 . - . ID=gene-RM672_RS07935;Name=RM672_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07935;old_locus_tag=RM672_07930 NZ_JAVRJS010000004.1 Protein Homology CDS 112028 113041 . - 0 ID=cds-WP_105965576.1;Parent=gene-RM672_RS07935;Dbxref=GenBank:WP_105965576.1;Name=WP_105965576.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461555.1;locus_tag=RM672_RS07935;product=M23 family metallopeptidase;protein_id=WP_105965576.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 113312 113740 . + . ID=gene-RM672_RS07940;Name=RM672_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07940;old_locus_tag=RM672_07935 NZ_JAVRJS010000004.1 Protein Homology CDS 113312 113740 . + 0 ID=cds-WP_037575350.1;Parent=gene-RM672_RS07940;Dbxref=GenBank:WP_037575350.1;Name=WP_037575350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478630.1;locus_tag=RM672_RS07940;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575350.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 113818 114777 . + . ID=gene-RM672_RS07945;Name=mhqE;gbkey=Gene;gene=mhqE;gene_biotype=protein_coding;locus_tag=RM672_RS07945;old_locus_tag=RM672_07940 NZ_JAVRJS010000004.1 Protein Homology CDS 113818 114777 . + 0 ID=cds-WP_037575346.1;Parent=gene-RM672_RS07945;Dbxref=GenBank:WP_037575346.1;Name=WP_037575346.1;gbkey=CDS;gene=mhqE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425714.1;locus_tag=RM672_RS07945;product=ring-cleaving dioxygenase MhqE;protein_id=WP_037575346.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 114797 115414 . + . ID=gene-RM672_RS07950;Name=RM672_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07950;old_locus_tag=RM672_07945 NZ_JAVRJS010000004.1 Protein Homology CDS 114797 115414 . + 0 ID=cds-WP_037575343.1;Parent=gene-RM672_RS07950;Dbxref=GenBank:WP_037575343.1;Name=WP_037575343.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=RM672_RS07950;product=flavin reductase family protein;protein_id=WP_037575343.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 115431 116018 . + . ID=gene-RM672_RS07955;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=RM672_RS07955;old_locus_tag=RM672_07950 NZ_JAVRJS010000004.1 Protein Homology CDS 115431 116018 . + 0 ID=cds-WP_037575340.1;Parent=gene-RM672_RS07955;Dbxref=GenBank:WP_037575340.1;Name=WP_037575340.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=RM672_RS07955;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_037575340.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 116132 116992 . - . ID=gene-RM672_RS07960;Name=RM672_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS07960;old_locus_tag=RM672_07955 NZ_JAVRJS010000004.1 Protein Homology CDS 116132 116992 . - 0 ID=cds-WP_037575337.1;Parent=gene-RM672_RS07960;Dbxref=GenBank:WP_037575337.1;Name=WP_037575337.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=RM672_RS07960;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_037575337.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 117034 117753 . - . ID=gene-RM672_RS07965;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=RM672_RS07965;old_locus_tag=RM672_07960 NZ_JAVRJS010000004.1 Protein Homology CDS 117034 117753 . - 0 ID=cds-WP_037575335.1;Parent=gene-RM672_RS07965;Dbxref=GenBank:WP_037575335.1;Name=WP_037575335.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=RM672_RS07965;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_037575335.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 117754 119628 . - . ID=gene-RM672_RS07970;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=RM672_RS07970;old_locus_tag=RM672_07965 NZ_JAVRJS010000004.1 Protein Homology CDS 117754 119628 . - 0 ID=cds-WP_037575332.1;Parent=gene-RM672_RS07970;Dbxref=GenBank:WP_037575332.1;Name=WP_037575332.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=RM672_RS07970;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_037575332.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 119645 121027 . - . ID=gene-RM672_RS07975;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=RM672_RS07975;old_locus_tag=RM672_07970 NZ_JAVRJS010000004.1 Protein Homology CDS 119645 121027 . - 0 ID=cds-WP_037575330.1;Parent=gene-RM672_RS07975;Dbxref=GenBank:WP_037575330.1;Name=WP_037575330.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=RM672_RS07975;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_037575330.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 121213 121560 . - . ID=gene-RM672_RS07980;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=RM672_RS07980;old_locus_tag=RM672_07975 NZ_JAVRJS010000004.1 Protein Homology CDS 121213 121560 . - 0 ID=cds-WP_037575327.1;Parent=gene-RM672_RS07980;Dbxref=GenBank:WP_037575327.1;Name=WP_037575327.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=RM672_RS07980;product=ribonuclease P protein component;protein_id=WP_037575327.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 121783 121920 . - . ID=gene-RM672_RS07985;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=RM672_RS07985;old_locus_tag=RM672_07980 NZ_JAVRJS010000004.1 Protein Homology CDS 121783 121920 . - 0 ID=cds-WP_000240855.1;Parent=gene-RM672_RS07985;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=RM672_RS07985;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 122457 123797 . + . ID=gene-RM672_RS07990;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=RM672_RS07990;old_locus_tag=RM672_07985 NZ_JAVRJS010000004.1 Protein Homology CDS 122457 123797 . + 0 ID=cds-WP_037575324.1;Parent=gene-RM672_RS07990;Dbxref=GenBank:WP_037575324.1;Name=WP_037575324.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466368.1;locus_tag=RM672_RS07990;product=chromosomal replication initiator protein DnaA;protein_id=WP_037575324.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 123979 125112 . + . ID=gene-RM672_RS07995;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=RM672_RS07995;old_locus_tag=RM672_07990 NZ_JAVRJS010000004.1 Protein Homology CDS 123979 125112 . + 0 ID=cds-WP_084276046.1;Parent=gene-RM672_RS07995;Dbxref=GenBank:WP_084276046.1;Name=WP_084276046.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=RM672_RS07995;product=DNA polymerase III subunit beta;protein_id=WP_084276046.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 125249 125947 . + . ID=gene-RM672_RS08000;Name=RM672_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08000;old_locus_tag=RM672_07995 NZ_JAVRJS010000004.1 Protein Homology CDS 125249 125947 . + 0 ID=cds-WP_311539348.1;Parent=gene-RM672_RS08000;Dbxref=GenBank:WP_311539348.1;Name=WP_311539348.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: protein motif:HMM:NF024853.7;locus_tag=RM672_RS08000;product=DsbA family protein;protein_id=WP_311539348.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 126092 126313 . + . ID=gene-RM672_RS08005;Name=RM672_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08005;old_locus_tag=RM672_08000 NZ_JAVRJS010000004.1 Protein Homology CDS 126092 126313 . + 0 ID=cds-WP_311540669.1;Parent=gene-RM672_RS08005;Dbxref=GenBank:WP_311540669.1;Name=WP_311540669.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612664.1;locus_tag=RM672_RS08005;product=RNA-binding S4 domain-containing protein;protein_id=WP_311540669.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 126310 127425 . + . ID=gene-RM672_RS08010;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=RM672_RS08010;old_locus_tag=RM672_08005 NZ_JAVRJS010000004.1 Protein Homology CDS 126310 127425 . + 0 ID=cds-WP_037575320.1;Parent=gene-RM672_RS08010;Dbxref=GenBank:WP_037575320.1;Name=WP_037575320.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=RM672_RS08010;product=DNA replication/repair protein RecF;protein_id=WP_037575320.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 127438 129369 . + . ID=gene-RM672_RS08015;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=RM672_RS08015;old_locus_tag=RM672_08010 NZ_JAVRJS010000004.1 Protein Homology CDS 127438 129369 . + 0 ID=cds-WP_375712557.1;Parent=gene-RM672_RS08015;Dbxref=GenBank:WP_375712557.1;Name=WP_375712557.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=RM672_RS08015;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_375712557.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 129402 132056 . + . ID=gene-RM672_RS08020;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=RM672_RS08020;old_locus_tag=RM672_08015 NZ_JAVRJS010000004.1 Protein Homology CDS 129402 132056 . + 0 ID=cds-WP_103159126.1;Parent=gene-RM672_RS08020;Dbxref=GenBank:WP_103159126.1;Name=WP_103159126.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498614.1;locus_tag=RM672_RS08020;product=DNA gyrase subunit A;protein_id=WP_103159126.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 132108 132920 . - . ID=gene-RM672_RS08025;Name=RM672_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08025;old_locus_tag=RM672_08020 NZ_JAVRJS010000004.1 Protein Homology CDS 132108 132920 . - 0 ID=cds-WP_103159125.1;Parent=gene-RM672_RS08025;Dbxref=GenBank:WP_103159125.1;Name=WP_103159125.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510617.1;locus_tag=RM672_RS08025;product=NAD(P)H-hydrate dehydratase;protein_id=WP_103159125.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 133196 134698 . + . ID=gene-RM672_RS08030;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=RM672_RS08030;old_locus_tag=RM672_08025 NZ_JAVRJS010000004.1 Protein Homology CDS 133196 134698 . + 0 ID=cds-WP_107371981.1;Parent=gene-RM672_RS08030;Dbxref=GenBank:WP_107371981.1;Name=WP_107371981.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454363.1;locus_tag=RM672_RS08030;product=histidine ammonia-lyase;protein_id=WP_107371981.1;transl_table=11 NZ_JAVRJS010000004.1 cmsearch binding_site 134764 134948 . + . ID=id-NZ_JAVRJS010000004.1:134764..134948;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJS010000004.1 RefSeq gene 135004 136284 . + . ID=gene-RM672_RS08035;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=RM672_RS08035;old_locus_tag=RM672_08030 NZ_JAVRJS010000004.1 Protein Homology CDS 135004 136284 . + 0 ID=cds-WP_311540667.1;Parent=gene-RM672_RS08035;Dbxref=GenBank:WP_311540667.1;Name=WP_311540667.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=RM672_RS08035;product=serine--tRNA ligase;protein_id=WP_311540667.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 136559 137251 . + . ID=gene-RM672_RS08040;Name=RM672_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08040;old_locus_tag=RM672_08035 NZ_JAVRJS010000004.1 Protein Homology CDS 136559 137251 . + 0 ID=cds-WP_037575308.1;Parent=gene-RM672_RS08040;Dbxref=GenBank:WP_037575308.1;Name=WP_037575308.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499825.1;locus_tag=RM672_RS08040;product=AzlC family ABC transporter permease;protein_id=WP_037575308.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 137248 137574 . + . ID=gene-RM672_RS08045;Name=RM672_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08045;old_locus_tag=RM672_08040 NZ_JAVRJS010000004.1 Protein Homology CDS 137248 137574 . + 0 ID=cds-WP_037575307.1;Parent=gene-RM672_RS08045;Dbxref=GenBank:WP_037575307.1;Name=WP_037575307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723684.1;locus_tag=RM672_RS08045;product=branched-chain amino acid transport AzlD family protein;protein_id=WP_037575307.1;transl_table=11 NZ_JAVRJS010000004.1 cmsearch riboswitch 137631 137732 . + . ID=id-NZ_JAVRJS010000004.1:137631..137732;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000004.1 RefSeq gene 137809 138774 . + . ID=gene-RM672_RS08050;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=RM672_RS08050;old_locus_tag=RM672_08045 NZ_JAVRJS010000004.1 Protein Homology CDS 137809 138774 . + 0 ID=cds-WP_311539349.1;Parent=gene-RM672_RS08050;Dbxref=GenBank:WP_311539349.1;Name=WP_311539349.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=RM672_RS08050;product=homoserine O-acetyltransferase MetX;protein_id=WP_311539349.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 139109 140014 . + . ID=gene-RM672_RS08055;Name=RM672_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08055;old_locus_tag=RM672_08050 NZ_JAVRJS010000004.1 Protein Homology CDS 139109 140014 . + 0 ID=cds-WP_037575303.1;Parent=gene-RM672_RS08055;Dbxref=GenBank:WP_037575303.1;Name=WP_037575303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=RM672_RS08055;product=DUF2232 domain-containing protein;protein_id=WP_037575303.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 140026 141993 . + . ID=gene-RM672_RS08060;Name=RM672_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08060;old_locus_tag=RM672_08055 NZ_JAVRJS010000004.1 Protein Homology CDS 140026 141993 . + 0 ID=cds-WP_037575301.1;Parent=gene-RM672_RS08060;Dbxref=GenBank:WP_037575301.1;Name=WP_037575301.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=RM672_RS08060;product=DHH family phosphoesterase;protein_id=WP_037575301.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 141990 142436 . + . ID=gene-RM672_RS08065;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=RM672_RS08065;old_locus_tag=RM672_08060 NZ_JAVRJS010000004.1 Protein Homology CDS 141990 142436 . + 0 ID=cds-WP_037575300.1;Parent=gene-RM672_RS08065;Dbxref=GenBank:WP_037575300.1;Name=WP_037575300.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=RM672_RS08065;product=50S ribosomal protein L9;protein_id=WP_037575300.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 142582 143982 . + . ID=gene-RM672_RS08070;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM672_RS08070;old_locus_tag=RM672_08065 NZ_JAVRJS010000004.1 Protein Homology CDS 142582 143982 . + 0 ID=cds-WP_105966000.1;Parent=gene-RM672_RS08070;Dbxref=GenBank:WP_105966000.1;Name=WP_105966000.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=RM672_RS08070;product=replicative DNA helicase;protein_id=WP_105966000.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 144273 145559 . + . ID=gene-RM672_RS08075;Name=RM672_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08075;old_locus_tag=RM672_08070 NZ_JAVRJS010000004.1 Protein Homology CDS 144273 145559 . + 0 ID=cds-WP_037575297.1;Parent=gene-RM672_RS08075;Dbxref=GenBank:WP_037575297.1;Name=WP_037575297.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=RM672_RS08075;product=adenylosuccinate synthase;protein_id=WP_037575297.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 145637 145921 . - . ID=gene-RM672_RS08080;Name=RM672_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08080;old_locus_tag=RM672_08075 NZ_JAVRJS010000004.1 Protein Homology CDS 145637 145921 . - 0 ID=cds-WP_051604985.1;Parent=gene-RM672_RS08080;Dbxref=GenBank:WP_051604985.1;Name=WP_051604985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506644.1;locus_tag=RM672_RS08080;product=YrhK family protein;protein_id=WP_051604985.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 146209 146283 . + . ID=gene-RM672_RS08085;Name=RM672_RS08085;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS08085;old_locus_tag=RM672_08080 NZ_JAVRJS010000004.1 tRNAscan-SE tRNA 146209 146283 . + . ID=rna-RM672_RS08085;Parent=gene-RM672_RS08085;anticodon=(pos:146242..146244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS08085;product=tRNA-Glu NZ_JAVRJS010000004.1 tRNAscan-SE exon 146209 146283 . + . ID=exon-RM672_RS08085-1;Parent=rna-RM672_RS08085;anticodon=(pos:146242..146244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS08085;product=tRNA-Glu NZ_JAVRJS010000004.1 RefSeq gene 146290 146363 . + . ID=gene-RM672_RS08090;Name=RM672_RS08090;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS08090;old_locus_tag=RM672_08085 NZ_JAVRJS010000004.1 tRNAscan-SE tRNA 146290 146363 . + . ID=rna-RM672_RS08090;Parent=gene-RM672_RS08090;anticodon=(pos:146324..146326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS08090;product=tRNA-Asp NZ_JAVRJS010000004.1 tRNAscan-SE exon 146290 146363 . + . ID=exon-RM672_RS08090-1;Parent=rna-RM672_RS08090;anticodon=(pos:146324..146326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS08090;product=tRNA-Asp NZ_JAVRJS010000004.1 RefSeq gene 146611 147312 . + . ID=gene-RM672_RS08095;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=RM672_RS08095;old_locus_tag=RM672_08090 NZ_JAVRJS010000004.1 Protein Homology CDS 146611 147312 . + 0 ID=cds-WP_037575295.1;Parent=gene-RM672_RS08095;Dbxref=GenBank:WP_037575295.1;Name=WP_037575295.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=RM672_RS08095;product=response regulator YycF;protein_id=WP_037575295.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 147328 149160 . + . ID=gene-RM672_RS08100;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=RM672_RS08100;old_locus_tag=RM672_08095 NZ_JAVRJS010000004.1 Protein Homology CDS 147328 149160 . + 0 ID=cds-WP_037575294.1;Parent=gene-RM672_RS08100;Dbxref=GenBank:WP_037575294.1;Name=WP_037575294.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274376.1;locus_tag=RM672_RS08100;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_037575294.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 149150 150487 . + . ID=gene-RM672_RS08105;Name=RM672_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08105;old_locus_tag=RM672_08100 NZ_JAVRJS010000004.1 Protein Homology CDS 149150 150487 . + 0 ID=cds-WP_037575291.1;Parent=gene-RM672_RS08105;Dbxref=GenBank:WP_037575291.1;Name=WP_037575291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=RM672_RS08105;product=YycH family regulatory protein;protein_id=WP_037575291.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 150484 151260 . + . ID=gene-RM672_RS08110;Name=RM672_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08110;old_locus_tag=RM672_08105 NZ_JAVRJS010000004.1 Protein Homology CDS 150484 151260 . + 0 ID=cds-WP_103159116.1;Parent=gene-RM672_RS08110;Dbxref=GenBank:WP_103159116.1;Name=WP_103159116.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=RM672_RS08110;product=two-component system regulatory protein YycI;protein_id=WP_103159116.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 151286 152068 . + . ID=gene-RM672_RS08115;Name=RM672_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08115;old_locus_tag=RM672_08110 NZ_JAVRJS010000004.1 Protein Homology CDS 151286 152068 . + 0 ID=cds-WP_105967344.1;Parent=gene-RM672_RS08115;Dbxref=GenBank:WP_105967344.1;Name=WP_105967344.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=RM672_RS08115;product=MBL fold metallo-hydrolase;protein_id=WP_105967344.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq pseudogene 152201 153472 . + . ID=gene-RM672_RS08120;Name=RM672_RS08120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08120;old_locus_tag=RM672_08115;pseudo=true NZ_JAVRJS010000004.1 Protein Homology CDS 152201 153472 . + 0 ID=cds-RM672_RS08120;Parent=gene-RM672_RS08120;Note=frameshifted;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174746.1;locus_tag=RM672_RS08120;product=arsenic transporter;pseudo=true;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 154256 154735 . + . ID=gene-RM672_RS08125;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=RM672_RS08125;old_locus_tag=RM672_08120 NZ_JAVRJS010000004.1 Protein Homology CDS 154256 154735 . + 0 ID=cds-WP_037575283.1;Parent=gene-RM672_RS08125;Dbxref=GenBank:WP_037575283.1;Name=WP_037575283.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=RM672_RS08125;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_037575283.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 154859 155035 . - . ID=gene-RM672_RS08130;Name=RM672_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08130;old_locus_tag=RM672_08125 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 154859 155035 . - 0 ID=cds-WP_157946216.1;Parent=gene-RM672_RS08130;Dbxref=GenBank:WP_157946216.1;Name=WP_157946216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08130;product=hypothetical protein;protein_id=WP_157946216.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 155151 158405 . - . ID=gene-RM672_RS08135;Name=RM672_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08135;old_locus_tag=RM672_08130 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 155151 158405 . - 0 ID=cds-WP_311542482.1;Parent=gene-RM672_RS08135;Dbxref=GenBank:WP_311542482.1;Name=WP_311542482.1;Ontology_term=GO:0006304,GO:0032259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA,methylation|0032259||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08135;product=DNA methyltransferase family protein;protein_id=WP_311542482.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 158492 158719 . - . ID=gene-RM672_RS08140;Name=RM672_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08140;old_locus_tag=RM672_08135 NZ_JAVRJS010000004.1 Protein Homology CDS 158492 158719 . - 0 ID=cds-WP_107367517.1;Parent=gene-RM672_RS08140;Dbxref=GenBank:WP_107367517.1;Name=WP_107367517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832432.1;locus_tag=RM672_RS08140;product=hypothetical protein;protein_id=WP_107367517.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 158733 159236 . - . ID=gene-RM672_RS08145;Name=RM672_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08145;old_locus_tag=RM672_08140 NZ_JAVRJS010000004.1 Protein Homology CDS 158733 159236 . - 0 ID=cds-WP_031912425.1;Parent=gene-RM672_RS08145;Dbxref=GenBank:WP_031912425.1;Name=WP_031912425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086592.1;locus_tag=RM672_RS08145;product=DUF1643 domain-containing protein;protein_id=WP_031912425.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 159251 159562 . - . ID=gene-RM672_RS08150;Name=RM672_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08150;old_locus_tag=RM672_08145 NZ_JAVRJS010000004.1 Protein Homology CDS 159251 159562 . - 0 ID=cds-WP_103357133.1;Parent=gene-RM672_RS08150;Dbxref=GenBank:WP_103357133.1;Name=WP_103357133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833212.1;locus_tag=RM672_RS08150;product=DUF960 family protein;protein_id=WP_103357133.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 159658 159996 . - . ID=gene-RM672_RS08155;Name=RM672_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08155;old_locus_tag=RM672_08150 NZ_JAVRJS010000004.1 Protein Homology CDS 159658 159996 . - 0 ID=cds-WP_031914243.1;Parent=gene-RM672_RS08155;Dbxref=GenBank:WP_031914243.1;Name=WP_031914243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171559.1;locus_tag=RM672_RS08155;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WP_031914243.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 160465 162096 . - . ID=gene-RM672_RS08160;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=RM672_RS08160;old_locus_tag=RM672_08155 NZ_JAVRJS010000004.1 Protein Homology CDS 160465 162096 . - 0 ID=cds-WP_031914244.1;Parent=gene-RM672_RS08160;Dbxref=GenBank:WP_031914244.1;Name=WP_031914244.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrB;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911193.1;locus_tag=RM672_RS08160;product=cassette chromosome recombinase CcrB;protein_id=WP_031914244.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 162116 163465 . - . ID=gene-RM672_RS08165;Name=ccrA;gbkey=Gene;gene=ccrA;gene_biotype=protein_coding;locus_tag=RM672_RS08165;old_locus_tag=RM672_08160 NZ_JAVRJS010000004.1 Protein Homology CDS 162116 163465 . - 0 ID=cds-WP_311542483.1;Parent=gene-RM672_RS08165;Dbxref=GenBank:WP_311542483.1;Name=WP_311542483.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrA;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=RM672_RS08165;product=cassette chromosome recombinase CcrA;protein_id=WP_311542483.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 163656 163934 . - . ID=gene-RM672_RS08170;Name=RM672_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08170;old_locus_tag=RM672_08165 NZ_JAVRJS010000004.1 Protein Homology CDS 163656 163934 . - 0 ID=cds-WP_031863530.1;Parent=gene-RM672_RS08170;Dbxref=GenBank:WP_031863530.1;Name=WP_031863530.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506259.1;locus_tag=RM672_RS08170;product=recombinase family protein;protein_id=WP_031863530.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 164005 165795 . - . ID=gene-RM672_RS08175;Name=cch1;gbkey=Gene;gene=cch1;gene_biotype=protein_coding;locus_tag=RM672_RS08175;old_locus_tag=RM672_08170 NZ_JAVRJS010000004.1 Protein Homology CDS 164005 165795 . - 0 ID=cds-WP_311542484.1;Parent=gene-RM672_RS08175;Dbxref=GenBank:WP_311542484.1;Name=WP_311542484.1;Ontology_term=GO:0043138;gbkey=CDS;gene=cch1;go_function=3'-5' DNA helicase activity|0043138||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723712.1;locus_tag=RM672_RS08175;product=cassette chromosome replicative helicase;protein_id=WP_311542484.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 165795 166085 . - . ID=gene-RM672_RS08180;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM672_RS08180;old_locus_tag=RM672_08175 NZ_JAVRJS010000004.1 Protein Homology CDS 165795 166085 . - 0 ID=cds-WP_107377044.1;Parent=gene-RM672_RS08180;Dbxref=GenBank:WP_107377044.1;Name=WP_107377044.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511823.1;locus_tag=RM672_RS08180;product=cassette chromosome ssDNA-binding protein;protein_id=WP_107377044.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 166227 167297 . + . ID=gene-RM672_RS08185;Name=RM672_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08185;old_locus_tag=RM672_08180 NZ_JAVRJS010000004.1 Protein Homology CDS 166227 167297 . + 0 ID=cds-WP_311542485.1;Parent=gene-RM672_RS08185;Dbxref=GenBank:WP_311542485.1;Name=WP_311542485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001099283.1;locus_tag=RM672_RS08185;product=hypothetical protein;protein_id=WP_311542485.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 167315 168829 . + . ID=gene-RM672_RS08190;Name=RM672_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08190;old_locus_tag=RM672_08185 NZ_JAVRJS010000004.1 Protein Homology CDS 167315 168829 . + 0 ID=cds-WP_311542486.1;Parent=gene-RM672_RS08190;Dbxref=GenBank:WP_311542486.1;Name=WP_311542486.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627204.1;locus_tag=RM672_RS08190;product=protein kinase domain-containing protein;protein_id=WP_311542486.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 169013 170797 . + . ID=gene-RM672_RS08195;Name=RM672_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08195;old_locus_tag=RM672_08190 NZ_JAVRJS010000004.1 Protein Homology CDS 169013 170797 . + 0 ID=cds-WP_311542487.1;Parent=gene-RM672_RS08195;Dbxref=GenBank:WP_311542487.1;Name=WP_311542487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666921.1;locus_tag=RM672_RS08195;product=zinc-ribbon domain-containing protein;protein_id=WP_311542487.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 170790 172427 . + . ID=gene-RM672_RS08200;Name=RM672_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08200;old_locus_tag=RM672_08195 NZ_JAVRJS010000004.1 Protein Homology CDS 170790 172427 . + 0 ID=cds-WP_311542489.1;Parent=gene-RM672_RS08200;Dbxref=GenBank:WP_311542489.1;Name=WP_311542489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274573.1;locus_tag=RM672_RS08200;product=ATP-binding protein;protein_id=WP_311542489.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 172969 178101 . + . ID=gene-RM672_RS08205;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=RM672_RS08205;old_locus_tag=RM672_08200 NZ_JAVRJS010000004.1 Protein Homology CDS 172969 178101 . + 0 ID=cds-WP_311542490.1;Parent=gene-RM672_RS08205;Dbxref=GenBank:WP_311542490.1;Name=WP_311542490.1;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722223.1;locus_tag=RM672_RS08205;product=anti-phage protein ProA;protein_id=WP_311542490.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 178103 178585 . + . ID=gene-RM672_RS08210;Name=RM672_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08210;old_locus_tag=RM672_08205 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 178103 178585 . + 0 ID=cds-WP_311541396.1;Parent=gene-RM672_RS08210;Dbxref=GenBank:WP_311541396.1;Name=WP_311541396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08210;product=DUF4064 domain-containing protein;protein_id=WP_311541396.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq pseudogene 178757 178897 . + . ID=gene-RM672_RS08215;Name=RM672_RS08215;end_range=178897,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08215;old_locus_tag=RM672_08210;partial=true;pseudo=true;start_range=.,178757 NZ_JAVRJS010000004.1 Protein Homology CDS 178757 178897 . + 0 ID=cds-RM672_RS08215;Parent=gene-RM672_RS08215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=178897,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505894.1;locus_tag=RM672_RS08215;partial=true;product=type I restriction enzyme endonuclease domain-containing protein;pseudo=true;start_range=.,178757;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 178954 180273 . + . ID=gene-RM672_RS08220;Name=RM672_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08220;old_locus_tag=RM672_08215 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 178954 180273 . + 0 ID=cds-WP_311542491.1;Parent=gene-RM672_RS08220;Dbxref=GenBank:WP_311542491.1;Name=WP_311542491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08220;product=hypothetical protein;protein_id=WP_311542491.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 180274 182412 . + . ID=gene-RM672_RS08225;Name=RM672_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08225;old_locus_tag=RM672_08220 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 180274 182412 . + 0 ID=cds-WP_311541394.1;Parent=gene-RM672_RS08225;Dbxref=GenBank:WP_311541394.1;Name=WP_311541394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08225;product=hypothetical protein;protein_id=WP_311541394.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 182615 183394 . + . ID=gene-RM672_RS08230;Name=RM672_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08230;old_locus_tag=RM672_08225 NZ_JAVRJS010000004.1 Protein Homology CDS 182615 183394 . + 0 ID=cds-WP_311541393.1;Parent=gene-RM672_RS08230;Dbxref=GenBank:WP_311541393.1;Name=WP_311541393.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502962.1;locus_tag=RM672_RS08230;product=HNH endonuclease;protein_id=WP_311541393.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 183658 184245 . - . ID=gene-RM672_RS08235;Name=RM672_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08235;old_locus_tag=RM672_08230 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 183658 184245 . - 0 ID=cds-WP_103159105.1;Parent=gene-RM672_RS08235;Dbxref=GenBank:WP_103159105.1;Name=WP_103159105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08235;product=hypothetical protein;protein_id=WP_103159105.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 184487 184648 . + . ID=gene-RM672_RS08240;Name=RM672_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08240;old_locus_tag=RM672_08235 NZ_JAVRJS010000004.1 Protein Homology CDS 184487 184648 . + 0 ID=cds-WP_311541392.1;Parent=gene-RM672_RS08240;Dbxref=GenBank:WP_311541392.1;Name=WP_311541392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628287.1;locus_tag=RM672_RS08240;product=hypothetical protein;protein_id=WP_311541392.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 184759 185265 . + . ID=gene-RM672_RS08245;Name=RM672_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08245;old_locus_tag=RM672_08240 NZ_JAVRJS010000004.1 Protein Homology CDS 184759 185265 . + 0 ID=cds-WP_311541391.1;Parent=gene-RM672_RS08245;Dbxref=GenBank:WP_311541391.1;Name=WP_311541391.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461496.1;locus_tag=RM672_RS08245;product=GNAT family N-acetyltransferase;protein_id=WP_311541391.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 185380 186849 . - . ID=gene-RM672_RS08250;Name=RM672_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08250;old_locus_tag=RM672_08245 NZ_JAVRJS010000004.1 Protein Homology CDS 185380 186849 . - 0 ID=cds-WP_311541390.1;Parent=gene-RM672_RS08250;Dbxref=GenBank:WP_311541390.1;Name=WP_311541390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023052.7;locus_tag=RM672_RS08250;product=C3-binding domain-containing protein;protein_id=WP_311541390.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 186953 187096 . + . ID=gene-RM672_RS08255;Name=RM672_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08255;old_locus_tag=RM672_08250 NZ_JAVRJS010000004.1 Protein Homology CDS 186953 187096 . + 0 ID=cds-WP_228514788.1;Parent=gene-RM672_RS08255;Dbxref=GenBank:WP_228514788.1;Name=WP_228514788.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.7;locus_tag=RM672_RS08255;product=winged helix-turn-helix domain-containing protein;protein_id=WP_228514788.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq pseudogene 187164 188161 . - . ID=gene-RM672_RS08260;Name=RM672_RS08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08260;old_locus_tag=RM672_08255;pseudo=true NZ_JAVRJS010000004.1 Protein Homology CDS 187164 188161 . - 0 ID=cds-RM672_RS08260;Parent=gene-RM672_RS08260;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191473.1;locus_tag=RM672_RS08260;product=FecCD family ABC transporter permease;pseudo=true;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 188158 189153 . - . ID=gene-RM672_RS08265;Name=RM672_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08265;old_locus_tag=RM672_08260 NZ_JAVRJS010000004.1 Protein Homology CDS 188158 189153 . - 0 ID=cds-WP_311541389.1;Parent=gene-RM672_RS08265;Dbxref=GenBank:WP_311541389.1;Name=WP_311541389.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580228.1;locus_tag=RM672_RS08265;product=FecCD family ABC transporter permease;protein_id=WP_311541389.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 189173 190156 . - . ID=gene-RM672_RS08270;Name=RM672_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08270;old_locus_tag=RM672_08265 NZ_JAVRJS010000004.1 Protein Homology CDS 189173 190156 . - 0 ID=cds-WP_311541402.1;Parent=gene-RM672_RS08270;Dbxref=GenBank:WP_311541402.1;Name=WP_311541402.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511713.1;locus_tag=RM672_RS08270;product=ABC transporter substrate-binding protein;protein_id=WP_311541402.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 190652 191365 . + . ID=gene-RM672_RS08275;Name=RM672_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08275;old_locus_tag=RM672_08270 NZ_JAVRJS010000004.1 Protein Homology CDS 190652 191365 . + 0 ID=cds-WP_103159408.1;Parent=gene-RM672_RS08275;Dbxref=GenBank:WP_103159408.1;Name=WP_103159408.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460941.1;locus_tag=RM672_RS08275;product=GntR family transcriptional regulator;protein_id=WP_103159408.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 191393 192511 . + . ID=gene-RM672_RS08280;Name=RM672_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08280;old_locus_tag=RM672_08275 NZ_JAVRJS010000004.1 Protein Homology CDS 191393 192511 . + 0 ID=cds-WP_103159409.1;Parent=gene-RM672_RS08280;Dbxref=GenBank:WP_103159409.1;Name=WP_103159409.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460940.1;locus_tag=RM672_RS08280;product=SIS domain-containing protein;protein_id=WP_103159409.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 192606 193550 . + . ID=gene-RM672_RS08285;Name=RM672_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08285;old_locus_tag=RM672_08280 NZ_JAVRJS010000004.1 Protein Homology CDS 192606 193550 . + 0 ID=cds-WP_107388360.1;Parent=gene-RM672_RS08285;Dbxref=GenBank:WP_107388360.1;Name=WP_107388360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017001107.1;locus_tag=RM672_RS08285;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_107388360.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 193567 195333 . + . ID=gene-RM672_RS08290;Name=RM672_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08290;old_locus_tag=RM672_08285 NZ_JAVRJS010000004.1 Protein Homology CDS 193567 195333 . + 0 ID=cds-WP_311541388.1;Parent=gene-RM672_RS08290;Dbxref=GenBank:WP_311541388.1;Name=WP_311541388.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425911.1;locus_tag=RM672_RS08290;product=glycoside hydrolase family 35 protein;protein_id=WP_311541388.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 195351 195830 . + . ID=gene-RM672_RS08295;Name=RM672_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08295;old_locus_tag=RM672_08290 NZ_JAVRJS010000004.1 Protein Homology CDS 195351 195830 . + 0 ID=cds-WP_037576396.1;Parent=gene-RM672_RS08295;Dbxref=GenBank:WP_037576396.1;Name=WP_037576396.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=RM672_RS08295;product=PTS sugar transporter subunit IIB;protein_id=WP_037576396.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 195847 196755 . + . ID=gene-RM672_RS08300;Name=RM672_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08300;old_locus_tag=RM672_08295 NZ_JAVRJS010000004.1 Protein Homology CDS 195847 196755 . + 0 ID=cds-WP_103159413.1;Parent=gene-RM672_RS08300;Dbxref=GenBank:WP_103159413.1;Name=WP_103159413.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=RM672_RS08300;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_103159413.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 196742 197641 . + . ID=gene-RM672_RS08305;Name=RM672_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08305;old_locus_tag=RM672_08300 NZ_JAVRJS010000004.1 Protein Homology CDS 196742 197641 . + 0 ID=cds-WP_107363801.1;Parent=gene-RM672_RS08305;Dbxref=GenBank:WP_107363801.1;Name=WP_107363801.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=RM672_RS08305;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_107363801.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 197657 198052 . + . ID=gene-RM672_RS08310;Name=RM672_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08310;old_locus_tag=RM672_08305 NZ_JAVRJS010000004.1 Protein Homology CDS 197657 198052 . + 0 ID=cds-WP_037576389.1;Parent=gene-RM672_RS08310;Dbxref=GenBank:WP_037576389.1;Name=WP_037576389.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479145.1;locus_tag=RM672_RS08310;product=PTS sugar transporter subunit IIA;protein_id=WP_037576389.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 198082 199233 . + . ID=gene-RM672_RS08315;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM672_RS08315;old_locus_tag=RM672_08310 NZ_JAVRJS010000004.1 Protein Homology CDS 198082 199233 . + 0 ID=cds-WP_105965558.1;Parent=gene-RM672_RS08315;Dbxref=GenBank:WP_105965558.1;Name=WP_105965558.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471824.1;locus_tag=RM672_RS08315;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_105965558.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 199520 200416 . + . ID=gene-RM672_RS08320;Name=RM672_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08320;old_locus_tag=RM672_08315 NZ_JAVRJS010000004.1 Protein Homology CDS 199520 200416 . + 0 ID=cds-WP_375712556.1;Parent=gene-RM672_RS08320;Dbxref=GenBank:WP_375712556.1;Name=WP_375712556.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170846.1;locus_tag=RM672_RS08320;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_375712556.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 200579 201502 . + . ID=gene-RM672_RS08325;Name=RM672_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08325;old_locus_tag=RM672_08320 NZ_JAVRJS010000004.1 Protein Homology CDS 200579 201502 . + 0 ID=cds-WP_103159417.1;Parent=gene-RM672_RS08325;Dbxref=GenBank:WP_103159417.1;Name=WP_103159417.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302238.1;locus_tag=RM672_RS08325;product=lactate/malate family dehydrogenase;protein_id=WP_103159417.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 201758 203620 . + . ID=gene-RM672_RS08330;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=RM672_RS08330;old_locus_tag=RM672_08325 NZ_JAVRJS010000004.1 Protein Homology CDS 201758 203620 . + 0 ID=cds-WP_107360677.1;Parent=gene-RM672_RS08330;Dbxref=GenBank:WP_107360677.1;Name=WP_107360677.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486864.1;locus_tag=RM672_RS08330;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_107360677.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 203607 204140 . + . ID=gene-RM672_RS08335;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=RM672_RS08335;old_locus_tag=RM672_08330 NZ_JAVRJS010000004.1 Protein Homology CDS 203607 204140 . + 0 ID=cds-WP_105967347.1;Parent=gene-RM672_RS08335;Dbxref=GenBank:WP_105967347.1;Name=WP_105967347.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460588.1;locus_tag=RM672_RS08335;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_105967347.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 204344 205726 . + . ID=gene-RM672_RS08340;Name=RM672_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08340;old_locus_tag=RM672_08335 NZ_JAVRJS010000004.1 Protein Homology CDS 204344 205726 . + 0 ID=cds-WP_182470787.1;Parent=gene-RM672_RS08340;Dbxref=GenBank:WP_182470787.1;Name=WP_182470787.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467307.1;locus_tag=RM672_RS08340;product=MDR family MFS transporter;protein_id=WP_182470787.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 205806 206765 . + . ID=gene-RM672_RS08345;Name=RM672_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08345;old_locus_tag=RM672_08340 NZ_JAVRJS010000004.1 Protein Homology CDS 205806 206765 . + 0 ID=cds-WP_311542492.1;Parent=gene-RM672_RS08345;Dbxref=GenBank:WP_311542492.1;Name=WP_311542492.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140911.1;locus_tag=RM672_RS08345;product=amidohydrolase family protein;protein_id=WP_311542492.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 206899 208437 . - . ID=gene-RM672_RS08350;Name=RM672_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08350;old_locus_tag=RM672_08345 NZ_JAVRJS010000004.1 Protein Homology CDS 206899 208437 . - 0 ID=cds-WP_105967349.1;Parent=gene-RM672_RS08350;Dbxref=GenBank:WP_105967349.1;Name=WP_105967349.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208888.1;locus_tag=RM672_RS08350;product=YSIRK-type signal peptide-containing protein;protein_id=WP_105967349.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 208457 209176 . - . ID=gene-RM672_RS08355;Name=RM672_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08355;old_locus_tag=RM672_08350 NZ_JAVRJS010000004.1 Protein Homology CDS 208457 209176 . - 0 ID=cds-WP_037576372.1;Parent=gene-RM672_RS08355;Dbxref=GenBank:WP_037576372.1;Name=WP_037576372.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498986.1;locus_tag=RM672_RS08355;product=exotoxin beta-grasp domain-containing protein;protein_id=WP_037576372.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 209821 211560 . + . ID=gene-RM672_RS08360;Name=RM672_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08360;old_locus_tag=RM672_08355 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 209821 211560 . + 0 ID=cds-WP_157946640.1;Parent=gene-RM672_RS08360;Dbxref=GenBank:WP_157946640.1;Name=WP_157946640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08360;product=coiled-coil domain-containing protein;protein_id=WP_157946640.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 211613 213694 . - . ID=gene-RM672_RS08365;Name=RM672_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08365;old_locus_tag=RM672_08360 NZ_JAVRJS010000004.1 Protein Homology CDS 211613 213694 . - 0 ID=cds-WP_311541386.1;Parent=gene-RM672_RS08365;Dbxref=GenBank:WP_311541386.1;Name=WP_311541386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901668.1;locus_tag=RM672_RS08365;product=amidase domain-containing protein;protein_id=WP_311541386.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 213905 216733 . + . ID=gene-RM672_RS08370;Name=RM672_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08370;old_locus_tag=RM672_08365 NZ_JAVRJS010000004.1 Protein Homology CDS 213905 216733 . + 0 ID=cds-WP_311541385.1;Parent=gene-RM672_RS08370;Dbxref=GenBank:WP_311541385.1;Name=WP_311541385.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=RM672_RS08370;product=YhgE/Pip family protein;protein_id=WP_311541385.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 216800 217384 . - . ID=gene-RM672_RS08375;Name=RM672_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08375;old_locus_tag=RM672_08370 NZ_JAVRJS010000004.1 Protein Homology CDS 216800 217384 . - 0 ID=cds-WP_037576365.1;Parent=gene-RM672_RS08375;Dbxref=GenBank:WP_037576365.1;Name=WP_037576365.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425866.1;locus_tag=RM672_RS08375;product=TetR/AcrR family transcriptional regulator;protein_id=WP_037576365.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 217549 219324 . + . ID=gene-RM672_RS08380;Name=RM672_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08380;old_locus_tag=RM672_08375 NZ_JAVRJS010000004.1 Protein Homology CDS 217549 219324 . + 0 ID=cds-WP_311541384.1;Parent=gene-RM672_RS08380;Dbxref=GenBank:WP_311541384.1;Name=WP_311541384.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=RM672_RS08380;product=oleate hydratase;protein_id=WP_311541384.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 219430 221061 . - . ID=gene-RM672_RS08385;Name=RM672_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08385;old_locus_tag=RM672_08380 NZ_JAVRJS010000004.1 Protein Homology CDS 219430 221061 . - 0 ID=cds-WP_311541383.1;Parent=gene-RM672_RS08385;Dbxref=GenBank:WP_311541383.1;Name=WP_311541383.1;Ontology_term=GO:0019865;gbkey=CDS;go_function=immunoglobulin binding|0019865||IEA;inference=COORDINATES: protein motif:HMM:NF014293.7;locus_tag=RM672_RS08385;product=B domain-containing protein;protein_id=WP_311541383.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 221817 222647 . + . ID=gene-RM672_RS08390;Name=RM672_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08390;old_locus_tag=RM672_08385 NZ_JAVRJS010000004.1 Protein Homology CDS 221817 222647 . + 0 ID=cds-WP_103159605.1;Parent=gene-RM672_RS08390;Dbxref=GenBank:WP_103159605.1;Name=WP_103159605.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM672_RS08390;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_103159605.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 222697 223584 . + . ID=gene-RM672_RS08395;Name=RM672_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08395;old_locus_tag=RM672_08390 NZ_JAVRJS010000004.1 Protein Homology CDS 222697 223584 . + 0 ID=cds-WP_375712630.1;Parent=gene-RM672_RS08395;Dbxref=GenBank:WP_375712630.1;Name=WP_375712630.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176733.1;locus_tag=RM672_RS08395;product=alpha/beta hydrolase;protein_id=WP_375712630.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 223807 224304 . + . ID=gene-RM672_RS08400;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM672_RS08400;old_locus_tag=RM672_08395 NZ_JAVRJS010000004.1 Protein Homology CDS 223807 224304 . + 0 ID=cds-WP_103159643.1;Parent=gene-RM672_RS08400;Dbxref=GenBank:WP_103159643.1;Name=WP_103159643.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM672_RS08400;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_103159643.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 224405 225844 . - . ID=gene-RM672_RS08405;Name=RM672_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08405;old_locus_tag=RM672_08400 NZ_JAVRJS010000004.1 Protein Homology CDS 224405 225844 . - 0 ID=cds-WP_311541381.1;Parent=gene-RM672_RS08405;Dbxref=GenBank:WP_311541381.1;Name=WP_311541381.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163982.1;locus_tag=RM672_RS08405;product=6-phospho-beta-glucosidase;protein_id=WP_311541381.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 226000 226704 . + . ID=gene-RM672_RS08410;Name=RM672_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08410;old_locus_tag=RM672_08405 NZ_JAVRJS010000004.1 Protein Homology CDS 226000 226704 . + 0 ID=cds-WP_037577369.1;Parent=gene-RM672_RS08410;Dbxref=GenBank:WP_037577369.1;Name=WP_037577369.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=RM672_RS08410;product=GntR family transcriptional regulator;protein_id=WP_037577369.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 226853 227320 . + . ID=gene-RM672_RS08415;Name=RM672_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08415;old_locus_tag=RM672_08410 NZ_JAVRJS010000004.1 GeneMarkS-2+ CDS 226853 227320 . + 0 ID=cds-WP_311541380.1;Parent=gene-RM672_RS08415;Dbxref=GenBank:WP_311541380.1;Name=WP_311541380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08415;product=hypothetical protein;protein_id=WP_311541380.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 227331 227534 . + . ID=gene-RM672_RS08420;Name=RM672_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08420;old_locus_tag=RM672_08415 NZ_JAVRJS010000004.1 Protein Homology CDS 227331 227534 . + 0 ID=cds-WP_182474603.1;Parent=gene-RM672_RS08420;Dbxref=GenBank:WP_182474603.1;Name=WP_182474603.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167695.1;locus_tag=RM672_RS08420;product=helix-turn-helix domain-containing protein;protein_id=WP_182474603.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 227899 228987 . + . ID=gene-RM672_RS08425;Name=RM672_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08425;old_locus_tag=RM672_08420 NZ_JAVRJS010000004.1 Protein Homology CDS 227899 228987 . + 0 ID=cds-WP_245173711.1;Parent=gene-RM672_RS08425;Dbxref=GenBank:WP_245173711.1;Name=WP_245173711.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF016150.7;locus_tag=RM672_RS08425;product=DUF418 domain-containing protein;protein_id=WP_245173711.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 229013 229753 . + . ID=gene-RM672_RS08430;Name=RM672_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08430;old_locus_tag=RM672_08425 NZ_JAVRJS010000004.1 Protein Homology CDS 229013 229753 . + 0 ID=cds-WP_169301499.1;Parent=gene-RM672_RS08430;Dbxref=GenBank:WP_169301499.1;Name=WP_169301499.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM672_RS08430;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_169301499.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 229994 230731 . + . ID=gene-RM672_RS08435;Name=RM672_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08435;old_locus_tag=RM672_08430 NZ_JAVRJS010000004.1 Protein Homology CDS 229994 230731 . + 0 ID=cds-WP_240917327.1;Parent=gene-RM672_RS08435;Dbxref=GenBank:WP_240917327.1;Name=WP_240917327.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804655.1;locus_tag=RM672_RS08435;product=GntR family transcriptional regulator;protein_id=WP_240917327.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 230977 231684 . + . ID=gene-RM672_RS08440;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM672_RS08440;old_locus_tag=RM672_08435 NZ_JAVRJS010000004.1 Protein Homology CDS 230977 231684 . + 0 ID=cds-WP_103159636.1;Parent=gene-RM672_RS08440;Dbxref=GenBank:WP_103159636.1;Name=WP_103159636.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011248855.1;locus_tag=RM672_RS08440;product=purine-nucleoside phosphorylase;protein_id=WP_103159636.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq gene 231697 233055 . + . ID=gene-RM672_RS08445;Name=RM672_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08445;old_locus_tag=RM672_08440 NZ_JAVRJS010000004.1 Protein Homology CDS 231697 233055 . + 0 ID=cds-WP_103159635.1;Parent=gene-RM672_RS08445;Dbxref=GenBank:WP_103159635.1;Name=WP_103159635.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425879.1;locus_tag=RM672_RS08445;product=MFS transporter;protein_id=WP_103159635.1;transl_table=11 NZ_JAVRJS010000004.1 RefSeq pseudogene 233068 233228 . + . ID=gene-RM672_RS08450;Name=RM672_RS08450;end_range=233228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08450;old_locus_tag=RM672_08445;partial=true;pseudo=true NZ_JAVRJS010000004.1 Protein Homology CDS 233068 233228 . + 0 ID=cds-RM672_RS08450;Parent=gene-RM672_RS08450;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=233228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM672_RS08450;partial=true;product=deoxyribose-phosphate aldolase;pseudo=true;transl_table=11 ##sequence-region NZ_JAVRJS010000005.1 1 129289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000005.1 RefSeq region 1 129289 . + . ID=NZ_JAVRJS010000005.1:1..129289;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000005.1 RefSeq pseudogene 1 200 . - . ID=gene-RM672_RS08455;Name=RM672_RS08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08455;old_locus_tag=RM672_08450;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 1 200 . - 0 ID=cds-RM672_RS08455;Parent=gene-RM672_RS08455;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08455;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 210 1004 . - . ID=gene-RM672_RS08460;Name=RM672_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08460;old_locus_tag=RM672_08455 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 210 1004 . - 0 ID=cds-WP_311541418.1;Parent=gene-RM672_RS08460;Dbxref=GenBank:WP_311541418.1;Name=WP_311541418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08460;product=hypothetical protein;protein_id=WP_311541418.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 1108 1386 . + . ID=gene-RM672_RS08465;Name=RM672_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08465;old_locus_tag=RM672_08460 NZ_JAVRJS010000005.1 Protein Homology CDS 1108 1386 . + 0 ID=cds-WP_165806231.1;Parent=gene-RM672_RS08465;Dbxref=GenBank:WP_165806231.1;Name=WP_165806231.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM672_RS08465;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_165806231.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 1497 2720 . + . ID=gene-RM672_RS08470;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=RM672_RS08470;old_locus_tag=RM672_08465 NZ_JAVRJS010000005.1 Protein Homology CDS 1497 2720 . + 0 ID=cds-WP_311541417.1;Parent=gene-RM672_RS08470;Dbxref=GenBank:WP_311541417.1;Name=WP_311541417.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167352.1;locus_tag=RM672_RS08470;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_311541417.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 2732 4288 . + . ID=gene-RM672_RS08475;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=RM672_RS08475;old_locus_tag=RM672_08470 NZ_JAVRJS010000005.1 Protein Homology CDS 2732 4288 . + 0 ID=cds-WP_311541416.1;Parent=gene-RM672_RS08475;Dbxref=GenBank:WP_311541416.1;Name=WP_311541416.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425978.1;locus_tag=RM672_RS08475;product=accessory Sec system protein Asp1;protein_id=WP_311541416.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 4278 5837 . + . ID=gene-RM672_RS08480;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=RM672_RS08480;old_locus_tag=RM672_08475 NZ_JAVRJS010000005.1 Protein Homology CDS 4278 5837 . + 0 ID=cds-WP_311542493.1;Parent=gene-RM672_RS08480;Dbxref=GenBank:WP_311542493.1;Name=WP_311542493.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137453.1;locus_tag=RM672_RS08480;product=accessory Sec system protein Asp2;protein_id=WP_311542493.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 5827 6738 . + . ID=gene-RM672_RS08485;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=RM672_RS08485;old_locus_tag=RM672_08480 NZ_JAVRJS010000005.1 Protein Homology CDS 5827 6738 . + 0 ID=cds-WP_311541414.1;Parent=gene-RM672_RS08485;Dbxref=GenBank:WP_311541414.1;Name=WP_311541414.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: protein motif:HMM:TIGR03711.1;locus_tag=RM672_RS08485;product=accessory Sec system protein Asp3;protein_id=WP_311541414.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 6728 9118 . + . ID=gene-RM672_RS08490;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=RM672_RS08490;old_locus_tag=RM672_08485 NZ_JAVRJS010000005.1 Protein Homology CDS 6728 9118 . + 0 ID=cds-WP_311541413.1;Parent=gene-RM672_RS08490;Dbxref=GenBank:WP_311541413.1;Name=WP_311541413.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=RM672_RS08490;product=accessory Sec system translocase SecA2;protein_id=WP_311541413.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 9134 10639 . + . ID=gene-RM672_RS08495;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=RM672_RS08495;old_locus_tag=RM672_08490 NZ_JAVRJS010000005.1 Protein Homology CDS 9134 10639 . + 0 ID=cds-WP_311542494.1;Parent=gene-RM672_RS08495;Dbxref=GenBank:WP_311542494.1;Name=WP_311542494.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804521.1;locus_tag=RM672_RS08495;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_311542494.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 10632 11972 . + . ID=gene-RM672_RS08500;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=RM672_RS08500;old_locus_tag=RM672_08495 NZ_JAVRJS010000005.1 Protein Homology CDS 10632 11972 . + 0 ID=cds-WP_105965639.1;Parent=gene-RM672_RS08500;Dbxref=GenBank:WP_105965639.1;Name=WP_105965639.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=RM672_RS08500;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_105965639.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 12537 13427 . + . ID=gene-RM672_RS08505;Name=RM672_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08505;old_locus_tag=RM672_08500 NZ_JAVRJS010000005.1 Protein Homology CDS 12537 13427 . + 0 ID=cds-WP_037576289.1;Parent=gene-RM672_RS08505;Dbxref=GenBank:WP_037576289.1;Name=WP_037576289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020062552.1;locus_tag=RM672_RS08505;product=PhzF family protein;protein_id=WP_037576289.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq pseudogene 13554 14491 . - . ID=gene-RM672_RS08510;Name=RM672_RS08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08510;old_locus_tag=RM672_08505;partial=true;pseudo=true;start_range=.,13554 NZ_JAVRJS010000005.1 Protein Homology CDS 13554 14491 . - 0 ID=cds-RM672_RS08510;Parent=gene-RM672_RS08510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498795.1;locus_tag=RM672_RS08510;partial=true;product=class I adenylate-forming enzyme family protein;pseudo=true;start_range=.,13554;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 14610 16193 . - . ID=gene-RM672_RS08515;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=RM672_RS08515;old_locus_tag=RM672_08510 NZ_JAVRJS010000005.1 Protein Homology CDS 14610 16193 . - 0 ID=cds-WP_311541411.1;Parent=gene-RM672_RS08515;Dbxref=GenBank:WP_311541411.1;Name=WP_311541411.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000993.1;locus_tag=RM672_RS08515;product=fatty acid degradation protein FadX;protein_id=WP_311541411.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 16406 17455 . + . ID=gene-RM672_RS08520;Name=RM672_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08520;old_locus_tag=RM672_08515 NZ_JAVRJS010000005.1 Protein Homology CDS 16406 17455 . + 0 ID=cds-WP_107367040.1;Parent=gene-RM672_RS08520;Dbxref=GenBank:WP_107367040.1;Name=WP_107367040.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=RM672_RS08520;product=ABC transporter permease;protein_id=WP_107367040.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 17468 18130 . + . ID=gene-RM672_RS08525;Name=RM672_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08525;old_locus_tag=RM672_08520 NZ_JAVRJS010000005.1 Protein Homology CDS 17468 18130 . + 0 ID=cds-WP_103159216.1;Parent=gene-RM672_RS08525;Dbxref=GenBank:WP_103159216.1;Name=WP_103159216.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274491.1;locus_tag=RM672_RS08525;product=ABC transporter ATP-binding protein;protein_id=WP_103159216.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 18143 18607 . + . ID=gene-RM672_RS08530;Name=RM672_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08530;old_locus_tag=RM672_08525 NZ_JAVRJS010000005.1 Protein Homology CDS 18143 18607 . + 0 ID=cds-WP_119505343.1;Parent=gene-RM672_RS08530;Dbxref=GenBank:WP_119505343.1;Name=WP_119505343.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.7;locus_tag=RM672_RS08530;product=AAA family ATPase;protein_id=WP_119505343.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 18913 19341 . + . ID=gene-RM672_RS08535;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=RM672_RS08535;old_locus_tag=RM672_08530 NZ_JAVRJS010000005.1 Protein Homology CDS 18913 19341 . + 0 ID=cds-WP_107367041.1;Parent=gene-RM672_RS08535;Dbxref=GenBank:WP_107367041.1;Name=WP_107367041.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480215.1;locus_tag=RM672_RS08535;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_107367041.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 19338 20654 . + . ID=gene-RM672_RS08540;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=RM672_RS08540;old_locus_tag=RM672_08535 NZ_JAVRJS010000005.1 Protein Homology CDS 19338 20654 . + 0 ID=cds-WP_311542495.1;Parent=gene-RM672_RS08540;Dbxref=GenBank:WP_311542495.1;Name=WP_311542495.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166861.1;locus_tag=RM672_RS08540;product=hypothiocyanous acid reductase MerA;protein_id=WP_311542495.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 20694 21446 . - . ID=gene-RM672_RS08545;Name=RM672_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08545;old_locus_tag=RM672_08540 NZ_JAVRJS010000005.1 Protein Homology CDS 20694 21446 . - 0 ID=cds-WP_103159212.1;Parent=gene-RM672_RS08545;Dbxref=GenBank:WP_103159212.1;Name=WP_103159212.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501965.1;locus_tag=RM672_RS08545;product=sulfite exporter TauE/SafE family protein;protein_id=WP_103159212.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 21449 21709 . - . ID=gene-RM672_RS08550;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=RM672_RS08550;old_locus_tag=RM672_08545 NZ_JAVRJS010000005.1 Protein Homology CDS 21449 21709 . - 0 ID=cds-WP_037576274.1;Parent=gene-RM672_RS08550;Dbxref=GenBank:WP_037576274.1;Name=WP_037576274.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911203.1;locus_tag=RM672_RS08550;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_037576274.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 21847 22926 . + . ID=gene-RM672_RS08555;Name=RM672_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08555;old_locus_tag=RM672_08550 NZ_JAVRJS010000005.1 Protein Homology CDS 21847 22926 . + 0 ID=cds-WP_037576272.1;Parent=gene-RM672_RS08555;Dbxref=GenBank:WP_037576272.1;Name=WP_037576272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236144.1;locus_tag=RM672_RS08555;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_037576272.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 22939 24279 . + . ID=gene-RM672_RS08560;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=RM672_RS08560;old_locus_tag=RM672_08555 NZ_JAVRJS010000005.1 Protein Homology CDS 22939 24279 . + 0 ID=cds-WP_233655076.1;Parent=gene-RM672_RS08560;Dbxref=GenBank:WP_233655076.1;Name=WP_233655076.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480193.1;locus_tag=RM672_RS08560;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_233655076.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 24407 25372 . + . ID=gene-RM672_RS08565;Name=RM672_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08565;old_locus_tag=RM672_08560 NZ_JAVRJS010000005.1 Protein Homology CDS 24407 25372 . + 0 ID=cds-WP_107377292.1;Parent=gene-RM672_RS08565;Dbxref=GenBank:WP_107377292.1;Name=WP_107377292.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=RM672_RS08565;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_107377292.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 25375 26256 . + . ID=gene-RM672_RS08570;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=RM672_RS08570;old_locus_tag=RM672_08565 NZ_JAVRJS010000005.1 Protein Homology CDS 25375 26256 . + 0 ID=cds-WP_037576259.1;Parent=gene-RM672_RS08570;Dbxref=GenBank:WP_037576259.1;Name=WP_037576259.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175513.1;locus_tag=RM672_RS08570;product=ribokinase;protein_id=WP_037576259.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 26249 26638 . + . ID=gene-RM672_RS08575;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=RM672_RS08575;old_locus_tag=RM672_08570 NZ_JAVRJS010000005.1 Protein Homology CDS 26249 26638 . + 0 ID=cds-WP_233650132.1;Parent=gene-RM672_RS08575;Dbxref=GenBank:WP_233650132.1;Name=WP_233650132.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=RM672_RS08575;product=D-ribose pyranase;protein_id=WP_233650132.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 26651 28147 . + . ID=gene-RM672_RS08580;Name=RM672_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08580;old_locus_tag=RM672_08575 NZ_JAVRJS010000005.1 Protein Homology CDS 26651 28147 . + 0 ID=cds-WP_311539986.1;Parent=gene-RM672_RS08580;Dbxref=GenBank:WP_311539986.1;Name=WP_311539986.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930523.1;locus_tag=RM672_RS08580;product=sugar ABC transporter ATP-binding protein;protein_id=WP_311539986.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 28128 29066 . + . ID=gene-RM672_RS08585;Name=RM672_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08585;old_locus_tag=RM672_08580 NZ_JAVRJS010000005.1 Protein Homology CDS 28128 29066 . + 0 ID=cds-WP_105963259.1;Parent=gene-RM672_RS08585;Dbxref=GenBank:WP_105963259.1;Name=WP_105963259.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274507.1;locus_tag=RM672_RS08585;product=ABC transporter permease subunit;protein_id=WP_105963259.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 29085 29999 . + . ID=gene-RM672_RS08590;Name=RM672_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08590;old_locus_tag=RM672_08585 NZ_JAVRJS010000005.1 Protein Homology CDS 29085 29999 . + 0 ID=cds-WP_311541409.1;Parent=gene-RM672_RS08590;Dbxref=GenBank:WP_311541409.1;Name=WP_311541409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003185844.1;locus_tag=RM672_RS08590;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_311541409.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 30897 32084 . - . ID=gene-RM672_RS08595;Name=RM672_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08595;old_locus_tag=RM672_08590 NZ_JAVRJS010000005.1 Protein Homology CDS 30897 32084 . - 0 ID=cds-WP_105965654.1;Parent=gene-RM672_RS08595;Dbxref=GenBank:WP_105965654.1;Name=WP_105965654.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303799.1;locus_tag=RM672_RS08595;product=MFS transporter;protein_id=WP_105965654.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 32204 33106 . + . ID=gene-RM672_RS08600;Name=RM672_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08600;old_locus_tag=RM672_08595 NZ_JAVRJS010000005.1 Protein Homology CDS 32204 33106 . + 0 ID=cds-WP_311541408.1;Parent=gene-RM672_RS08600;Dbxref=GenBank:WP_311541408.1;Name=WP_311541408.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444833.1;locus_tag=RM672_RS08600;product=LysR family transcriptional regulator;protein_id=WP_311541408.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 33191 33682 . + . ID=gene-RM672_RS08605;Name=RM672_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08605;old_locus_tag=RM672_08600 NZ_JAVRJS010000005.1 Protein Homology CDS 33191 33682 . + 0 ID=cds-WP_037576242.1;Parent=gene-RM672_RS08605;Dbxref=GenBank:WP_037576242.1;Name=WP_037576242.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901524.1;locus_tag=RM672_RS08605;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_037576242.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 33707 35710 . + . ID=gene-RM672_RS08610;Name=RM672_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08610;old_locus_tag=RM672_08605 NZ_JAVRJS010000005.1 Protein Homology CDS 33707 35710 . + 0 ID=cds-WP_107360439.1;Parent=gene-RM672_RS08610;Dbxref=GenBank:WP_107360439.1;Name=WP_107360439.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174984.1;locus_tag=RM672_RS08610;product=cation:proton antiporter;protein_id=WP_107360439.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 36143 37468 . + . ID=gene-RM672_RS08615;Name=RM672_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08615;old_locus_tag=RM672_08610 NZ_JAVRJS010000005.1 Protein Homology CDS 36143 37468 . + 0 ID=cds-WP_210433488.1;Parent=gene-RM672_RS08615;Dbxref=GenBank:WP_210433488.1;Name=WP_210433488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471268.1;locus_tag=RM672_RS08615;product=YjiH family protein;protein_id=WP_210433488.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 37780 39723 . + . ID=gene-RM672_RS08620;Name=RM672_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08620;old_locus_tag=RM672_08615 NZ_JAVRJS010000005.1 Protein Homology CDS 37780 39723 . + 0 ID=cds-WP_158694254.1;Parent=gene-RM672_RS08620;Dbxref=GenBank:WP_158694254.1;Name=WP_158694254.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM672_RS08620;product=BglG family transcription antiterminator;protein_id=WP_158694254.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 39725 40168 . + . ID=gene-RM672_RS08625;Name=RM672_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08625;old_locus_tag=RM672_08620 NZ_JAVRJS010000005.1 Protein Homology CDS 39725 40168 . + 0 ID=cds-WP_103159202.1;Parent=gene-RM672_RS08625;Dbxref=GenBank:WP_103159202.1;Name=WP_103159202.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191793.1;locus_tag=RM672_RS08625;product=PTS sugar transporter subunit IIA;protein_id=WP_103159202.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 40170 40454 . + . ID=gene-RM672_RS08630;Name=RM672_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08630;old_locus_tag=RM672_08625 NZ_JAVRJS010000005.1 Protein Homology CDS 40170 40454 . + 0 ID=cds-WP_105963264.1;Parent=gene-RM672_RS08630;Dbxref=GenBank:WP_105963264.1;Name=WP_105963264.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=RM672_RS08630;product=PTS sugar transporter subunit IIB;protein_id=WP_105963264.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 40472 41818 . + . ID=gene-RM672_RS08635;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=RM672_RS08635;old_locus_tag=RM672_08630 NZ_JAVRJS010000005.1 Protein Homology CDS 40472 41818 . + 0 ID=cds-WP_037576224.1;Parent=gene-RM672_RS08635;Dbxref=GenBank:WP_037576224.1;Name=WP_037576224.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167037.1;locus_tag=RM672_RS08635;product=PTS ascorbate transporter subunit IIC;protein_id=WP_037576224.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 41928 43202 . - . ID=gene-RM672_RS08640;Name=RM672_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08640;old_locus_tag=RM672_08635 NZ_JAVRJS010000005.1 Protein Homology CDS 41928 43202 . - 0 ID=cds-WP_172458455.1;Parent=gene-RM672_RS08640;Dbxref=GenBank:WP_172458455.1;Name=WP_172458455.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=RM672_RS08640;product=YSIRK-type signal peptide-containing protein;protein_id=WP_172458455.1;transl_table=11 NZ_JAVRJS010000005.1 cmsearch riboswitch 43457 43554 . + . ID=id-NZ_JAVRJS010000005.1:43457..43554;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000005.1 RefSeq gene 43615 44892 . + . ID=gene-RM672_RS08645;Name=RM672_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08645;old_locus_tag=RM672_08640 NZ_JAVRJS010000005.1 Protein Homology CDS 43615 44892 . + 0 ID=cds-WP_105965658.1;Parent=gene-RM672_RS08645;Dbxref=GenBank:WP_105965658.1;Name=WP_105965658.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=RM672_RS08645;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_105965658.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 44909 45061 . + . ID=gene-RM672_RS08650;Name=RM672_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08650;old_locus_tag=RM672_08645 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 44909 45061 . + 0 ID=cds-WP_157946192.1;Parent=gene-RM672_RS08650;Dbxref=GenBank:WP_157946192.1;Name=WP_157946192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08650;product=hypothetical protein;protein_id=WP_157946192.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 45193 45885 . + . ID=gene-RM672_RS08655;Name=RM672_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08655;old_locus_tag=RM672_08650 NZ_JAVRJS010000005.1 Protein Homology CDS 45193 45885 . + 0 ID=cds-WP_311539983.1;Parent=gene-RM672_RS08655;Dbxref=GenBank:WP_311539983.1;Name=WP_311539983.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=RM672_RS08655;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_311539983.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 46164 47327 . + . ID=gene-RM672_RS08660;Name=RM672_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08660;old_locus_tag=RM672_08655 NZ_JAVRJS010000005.1 Protein Homology CDS 46164 47327 . + 0 ID=cds-WP_105965660.1;Parent=gene-RM672_RS08660;Dbxref=GenBank:WP_105965660.1;Name=WP_105965660.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM672_RS08660;product=MFS transporter;protein_id=WP_105965660.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 47373 48386 . - . ID=gene-RM672_RS08665;Name=RM672_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08665;old_locus_tag=RM672_08660 NZ_JAVRJS010000005.1 Protein Homology CDS 47373 48386 . - 0 ID=cds-WP_119513116.1;Parent=gene-RM672_RS08665;Dbxref=GenBank:WP_119513116.1;Name=WP_119513116.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019474.7;locus_tag=RM672_RS08665;product=alpha/beta hydrolase;protein_id=WP_119513116.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq pseudogene 48588 49586 . + . ID=gene-RM672_RS08670;Name=RM672_RS08670;end_range=49586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08670;old_locus_tag=RM672_08665;partial=true;pseudo=true NZ_JAVRJS010000005.1 Protein Homology CDS 48588 49586 . + 0 ID=cds-RM672_RS08670;Parent=gene-RM672_RS08670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0030001,GO:0046872;end_range=49586,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727767.1;locus_tag=RM672_RS08670;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 49633 50526 . - . ID=gene-RM672_RS08675;Name=RM672_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08675;old_locus_tag=RM672_08670 NZ_JAVRJS010000005.1 Protein Homology CDS 49633 50526 . - 0 ID=cds-WP_103159195.1;Parent=gene-RM672_RS08675;Dbxref=GenBank:WP_103159195.1;Name=WP_103159195.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471440.1;locus_tag=RM672_RS08675;product=fructose bisphosphate aldolase;protein_id=WP_103159195.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 50824 52017 . - . ID=gene-RM672_RS08680;Name=tcaB;gbkey=Gene;gene=tcaB;gene_biotype=protein_coding;locus_tag=RM672_RS08680;old_locus_tag=RM672_08675 NZ_JAVRJS010000005.1 Protein Homology CDS 50824 52017 . - 0 ID=cds-WP_107363685.1;Parent=gene-RM672_RS08680;Dbxref=GenBank:WP_107363685.1;Name=WP_107363685.1;gbkey=CDS;gene=tcaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168887.1;locus_tag=RM672_RS08680;product=putative multidrug effflux MFS transporter TcaB;protein_id=WP_107363685.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 52029 52580 . - . ID=gene-RM672_RS08685;Name=RM672_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08685;old_locus_tag=RM672_08680 NZ_JAVRJS010000005.1 Protein Homology CDS 52029 52580 . - 0 ID=cds-WP_037576192.1;Parent=gene-RM672_RS08685;Dbxref=GenBank:WP_037576192.1;Name=WP_037576192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606891.1;locus_tag=RM672_RS08685;product=isochorismatase family protein;protein_id=WP_037576192.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 52850 53641 . + . ID=gene-RM672_RS08690;Name=RM672_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08690;old_locus_tag=RM672_08685 NZ_JAVRJS010000005.1 Protein Homology CDS 52850 53641 . + 0 ID=cds-WP_311542496.1;Parent=gene-RM672_RS08690;Dbxref=GenBank:WP_311542496.1;Name=WP_311542496.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638060.1;locus_tag=RM672_RS08690;product=arylamine N-acetyltransferase family protein;protein_id=WP_311542496.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 53652 54212 . + . ID=gene-RM672_RS08695;Name=RM672_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08695;old_locus_tag=RM672_08690 NZ_JAVRJS010000005.1 Protein Homology CDS 53652 54212 . + 0 ID=cds-WP_103159191.1;Parent=gene-RM672_RS08695;Dbxref=GenBank:WP_103159191.1;Name=WP_103159191.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM672_RS08695;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103159191.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 54609 55823 . + . ID=gene-RM672_RS08700;Name=RM672_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08700;old_locus_tag=RM672_08695 NZ_JAVRJS010000005.1 Protein Homology CDS 54609 55823 . + 0 ID=cds-WP_311539994.1;Parent=gene-RM672_RS08700;Dbxref=GenBank:WP_311539994.1;Name=WP_311539994.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF006143.0;locus_tag=RM672_RS08700;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_311539994.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 55924 56634 . - . ID=gene-RM672_RS08705;Name=RM672_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08705;old_locus_tag=RM672_08700 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 55924 56634 . - 0 ID=cds-WP_107367054.1;Parent=gene-RM672_RS08705;Dbxref=GenBank:WP_107367054.1;Name=WP_107367054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08705;product=hypothetical protein;protein_id=WP_107367054.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 56786 58582 . - . ID=gene-RM672_RS08710;Name=RM672_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08710;old_locus_tag=RM672_08705 NZ_JAVRJS010000005.1 Protein Homology CDS 56786 58582 . - 0 ID=cds-WP_311539982.1;Parent=gene-RM672_RS08710;Dbxref=GenBank:WP_311539982.1;Name=WP_311539982.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379833.1;locus_tag=RM672_RS08710;product=acyltransferase family protein;protein_id=WP_311539982.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 58824 59156 . - . ID=gene-RM672_RS08715;Name=RM672_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08715;old_locus_tag=RM672_08710 NZ_JAVRJS010000005.1 Protein Homology CDS 58824 59156 . - 0 ID=cds-WP_105963359.1;Parent=gene-RM672_RS08715;Dbxref=GenBank:WP_105963359.1;Name=WP_105963359.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274571.1;locus_tag=RM672_RS08715;product=nucleotide pyrophosphohydrolase;protein_id=WP_105963359.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 59152 60891 . - . ID=gene-RM672_RS08720;Name=RM672_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08720;old_locus_tag=RM672_08715 NZ_JAVRJS010000005.1 Protein Homology CDS 59152 60891 . - 0 ID=cds-WP_311541407.1;Parent=gene-RM672_RS08720;Dbxref=GenBank:WP_311541407.1;Name=WP_311541407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473186.1;locus_tag=RM672_RS08720;product=DUF2075 domain-containing protein;protein_id=WP_311541407.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 61487 62038 . + . ID=gene-RM672_RS08725;Name=RM672_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08725;old_locus_tag=RM672_08720 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 61487 62038 . + 0 ID=cds-WP_103158945.1;Parent=gene-RM672_RS08725;Dbxref=GenBank:WP_103158945.1;Name=WP_103158945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08725;product=hypothetical protein;protein_id=WP_103158945.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 62439 64031 . + . ID=gene-RM672_RS08730;Name=RM672_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08730;old_locus_tag=RM672_08725 NZ_JAVRJS010000005.1 Protein Homology CDS 62439 64031 . + 0 ID=cds-WP_119513124.1;Parent=gene-RM672_RS08730;Dbxref=GenBank:WP_119513124.1;Name=WP_119513124.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=RM672_RS08730;product=solute:sodium symporter family transporter;protein_id=WP_119513124.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 64405 65088 . - . ID=gene-RM672_RS08735;Name=RM672_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08735;old_locus_tag=RM672_08730 NZ_JAVRJS010000005.1 Protein Homology CDS 64405 65088 . - 0 ID=cds-WP_051605003.1;Parent=gene-RM672_RS08735;Dbxref=GenBank:WP_051605003.1;Name=WP_051605003.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: protein motif:HMM:NF015277.7;locus_tag=RM672_RS08735;product=acetolactate decarboxylase;protein_id=WP_051605003.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 65427 66380 . + . ID=gene-RM672_RS08740;Name=RM672_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08740;old_locus_tag=RM672_08735 NZ_JAVRJS010000005.1 Protein Homology CDS 65427 66380 . + 0 ID=cds-WP_107378402.1;Parent=gene-RM672_RS08740;Dbxref=GenBank:WP_107378402.1;Name=WP_107378402.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.8;locus_tag=RM672_RS08740;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_107378402.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 66447 67385 . - . ID=gene-RM672_RS08745;Name=RM672_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08745;old_locus_tag=RM672_08740 NZ_JAVRJS010000005.1 Protein Homology CDS 66447 67385 . - 0 ID=cds-WP_311539980.1;Parent=gene-RM672_RS08745;Dbxref=GenBank:WP_311539980.1;Name=WP_311539980.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471437.1;locus_tag=RM672_RS08745;product=ketopantoate reductase family protein;protein_id=WP_311539980.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 67570 69003 . + . ID=gene-RM672_RS08750;Name=RM672_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08750;old_locus_tag=RM672_08745 NZ_JAVRJS010000005.1 Protein Homology CDS 67570 69003 . + 0 ID=cds-WP_037576156.1;Parent=gene-RM672_RS08750;Dbxref=GenBank:WP_037576156.1;Name=WP_037576156.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723332.1;locus_tag=RM672_RS08750;product=MDR family MFS transporter;protein_id=WP_037576156.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 69028 70254 . + . ID=gene-RM672_RS08755;Name=RM672_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08755;old_locus_tag=RM672_08750 NZ_JAVRJS010000005.1 Protein Homology CDS 69028 70254 . + 0 ID=cds-WP_103158949.1;Parent=gene-RM672_RS08755;Dbxref=GenBank:WP_103158949.1;Name=WP_103158949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503250.1;locus_tag=RM672_RS08755;product=ArgE/DapE family deacylase;protein_id=WP_103158949.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 70619 72013 . + . ID=gene-RM672_RS08760;Name=RM672_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08760;old_locus_tag=RM672_08755 NZ_JAVRJS010000005.1 Protein Homology CDS 70619 72013 . + 0 ID=cds-WP_105996909.1;Parent=gene-RM672_RS08760;Dbxref=GenBank:WP_105996909.1;Name=WP_105996909.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274758.1;locus_tag=RM672_RS08760;product=MFS transporter;protein_id=WP_105996909.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 72350 72466 . + . ID=gene-RM672_RS08765;Name=RM672_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08765;old_locus_tag=RM672_08760 NZ_JAVRJS010000005.1 Protein Homology CDS 72350 72466 . + 0 ID=cds-WP_105996910.1;Parent=gene-RM672_RS08765;Dbxref=GenBank:WP_105996910.1;Name=WP_105996910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022861.7;locus_tag=RM672_RS08765;product=subtilosin A family bacteriocin;protein_id=WP_105996910.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 72833 72997 . + . ID=gene-RM672_RS08770;Name=RM672_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08770;old_locus_tag=RM672_08765 NZ_JAVRJS010000005.1 Protein Homology CDS 72833 72997 . + 0 ID=cds-WP_165885403.1;Parent=gene-RM672_RS08770;Dbxref=GenBank:WP_165885403.1;Name=WP_165885403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361781.1;locus_tag=RM672_RS08770;product=hypothetical protein;protein_id=WP_165885403.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 73401 74027 . + . ID=gene-RM672_RS08775;Name=RM672_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08775;old_locus_tag=RM672_08770 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 73401 74027 . + 0 ID=cds-WP_105965668.1;Parent=gene-RM672_RS08775;Dbxref=GenBank:WP_105965668.1;Name=WP_105965668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08775;product=hypothetical protein;protein_id=WP_105965668.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 74004 74690 . - . ID=gene-RM672_RS08780;Name=RM672_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08780;old_locus_tag=RM672_08775 NZ_JAVRJS010000005.1 Protein Homology CDS 74004 74690 . - 0 ID=cds-WP_105996911.1;Parent=gene-RM672_RS08780;Dbxref=GenBank:WP_105996911.1;Name=WP_105996911.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM672_RS08780;product=Crp/Fnr family transcriptional regulator;protein_id=WP_105996911.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 75127 75228 . - . ID=gene-RM672_RS08785;Name=RM672_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08785;old_locus_tag=RM672_08780 NZ_JAVRJS010000005.1 Protein Homology CDS 75127 75228 . - 0 ID=cds-WP_107358294.1;Parent=gene-RM672_RS08785;Dbxref=GenBank:WP_107358294.1;Name=WP_107358294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM672_RS08785;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107358294.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 75549 76907 . - . ID=gene-RM672_RS08790;Name=RM672_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08790;old_locus_tag=RM672_08785 NZ_JAVRJS010000005.1 Protein Homology CDS 75549 76907 . - 0 ID=cds-WP_103158951.1;Parent=gene-RM672_RS08790;Dbxref=GenBank:WP_103158951.1;Name=WP_103158951.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549730.1;locus_tag=RM672_RS08790;product=alanine/glycine:cation symporter family protein;protein_id=WP_103158951.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 77305 78900 . + . ID=gene-RM672_RS08795;Name=RM672_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08795;old_locus_tag=RM672_08790 NZ_JAVRJS010000005.1 Protein Homology CDS 77305 78900 . + 0 ID=cds-WP_311539979.1;Parent=gene-RM672_RS08795;Dbxref=GenBank:WP_311539979.1;Name=WP_311539979.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274537.1;locus_tag=RM672_RS08795;product=FGGY-family carbohydrate kinase;protein_id=WP_311539979.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 79245 80516 . + . ID=gene-RM672_RS08800;Name=RM672_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08800;old_locus_tag=RM672_08795 NZ_JAVRJS010000005.1 Protein Homology CDS 79245 80516 . + 0 ID=cds-WP_069191686.1;Parent=gene-RM672_RS08800;Dbxref=GenBank:WP_069191686.1;Name=WP_069191686.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF033912.1;locus_tag=RM672_RS08800;product=mechanosensitive ion channel;protein_id=WP_069191686.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 80559 81044 . - . ID=gene-RM672_RS08805;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM672_RS08805;old_locus_tag=RM672_08800 NZ_JAVRJS010000005.1 Protein Homology CDS 80559 81044 . - 0 ID=cds-WP_233655101.1;Parent=gene-RM672_RS08805;Dbxref=GenBank:WP_233655101.1;Name=WP_233655101.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM672_RS08805;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_233655101.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 81419 81655 . - . ID=gene-RM672_RS08810;Name=RM672_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08810;old_locus_tag=RM672_08805 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 81419 81655 . - 0 ID=cds-WP_037577403.1;Parent=gene-RM672_RS08810;Dbxref=GenBank:WP_037577403.1;Name=WP_037577403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08810;product=hypothetical protein;protein_id=WP_037577403.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 82199 82852 . + . ID=gene-RM672_RS08815;Name=RM672_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08815;old_locus_tag=RM672_08810 NZ_JAVRJS010000005.1 Protein Homology CDS 82199 82852 . + 0 ID=cds-WP_051605030.1;Parent=gene-RM672_RS08815;Dbxref=GenBank:WP_051605030.1;Name=WP_051605030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.7;locus_tag=RM672_RS08815;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_051605030.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 83137 85698 . + . ID=gene-RM672_RS08820;Name=RM672_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08820;old_locus_tag=RM672_08815 NZ_JAVRJS010000005.1 Protein Homology CDS 83137 85698 . + 0 ID=cds-WP_311541406.1;Parent=gene-RM672_RS08820;Dbxref=GenBank:WP_311541406.1;Name=WP_311541406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450569.1;locus_tag=RM672_RS08820;product=YfhO family protein;protein_id=WP_311541406.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 85923 87521 . - . ID=gene-RM672_RS08825;Name=RM672_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08825;old_locus_tag=RM672_08820 NZ_JAVRJS010000005.1 Protein Homology CDS 85923 87521 . - 0 ID=cds-WP_311542497.1;Parent=gene-RM672_RS08825;Dbxref=GenBank:WP_311542497.1;Name=WP_311542497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432872.1;locus_tag=RM672_RS08825;product=gamma-glutamyltransferase;protein_id=WP_311542497.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 87505 87795 . - . ID=gene-RM672_RS08830;Name=RM672_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08830;old_locus_tag=RM672_08825 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 87505 87795 . - 0 ID=cds-WP_037577412.1;Parent=gene-RM672_RS08830;Dbxref=GenBank:WP_037577412.1;Name=WP_037577412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08830;product=hypothetical protein;protein_id=WP_037577412.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 87785 88855 . - . ID=gene-RM672_RS08835;Name=RM672_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08835;old_locus_tag=RM672_08830 NZ_JAVRJS010000005.1 Protein Homology CDS 87785 88855 . - 0 ID=cds-WP_103159493.1;Parent=gene-RM672_RS08835;Dbxref=GenBank:WP_103159493.1;Name=WP_103159493.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302327.1;locus_tag=RM672_RS08835;product=CapA family protein;protein_id=WP_103159493.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 88870 89322 . - . ID=gene-RM672_RS08840;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=RM672_RS08840;old_locus_tag=RM672_08835 NZ_JAVRJS010000005.1 Protein Homology CDS 88870 89322 . - 0 ID=cds-WP_037577418.1;Parent=gene-RM672_RS08840;Dbxref=GenBank:WP_037577418.1;Name=WP_037577418.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480095.1;locus_tag=RM672_RS08840;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WP_037577418.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 89325 90485 . - . ID=gene-RM672_RS08845;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=RM672_RS08845;old_locus_tag=RM672_08840 NZ_JAVRJS010000005.1 Protein Homology CDS 89325 90485 . - 0 ID=cds-WP_105963285.1;Parent=gene-RM672_RS08845;Dbxref=GenBank:WP_105963285.1;Name=WP_105963285.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=RM672_RS08845;product=poly-gamma-glutamate synthase PgsB;protein_id=WP_105963285.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 91171 92100 . - . ID=gene-RM672_RS08850;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=RM672_RS08850;old_locus_tag=RM672_08845 NZ_JAVRJS010000005.1 Protein Homology CDS 91171 92100 . - 0 ID=cds-WP_107378510.1;Parent=gene-RM672_RS08850;Dbxref=GenBank:WP_107378510.1;Name=WP_107378510.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434903.1;locus_tag=RM672_RS08850;product=sphingomyelin phosphodiesterase;protein_id=WP_107378510.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 92709 94184 . + . ID=gene-RM672_RS08855;Name=RM672_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08855;old_locus_tag=RM672_08850 NZ_JAVRJS010000005.1 Protein Homology CDS 92709 94184 . + 0 ID=cds-WP_105963286.1;Parent=gene-RM672_RS08855;Dbxref=GenBank:WP_105963286.1;Name=WP_105963286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168419.1;locus_tag=RM672_RS08855;product=Sau3AI family type II restriction endonuclease;protein_id=WP_105963286.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 94316 95554 . + . ID=gene-RM672_RS08860;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=RM672_RS08860;old_locus_tag=RM672_08855 NZ_JAVRJS010000005.1 Protein Homology CDS 94316 95554 . + 0 ID=cds-WP_105963287.1;Parent=gene-RM672_RS08860;Dbxref=GenBank:WP_105963287.1;Name=WP_105963287.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489500.1;locus_tag=RM672_RS08860;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_105963287.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 95903 97390 . + . ID=gene-RM672_RS08865;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM672_RS08865;old_locus_tag=RM672_08860 NZ_JAVRJS010000005.1 Protein Homology CDS 95903 97390 . + 0 ID=cds-WP_107368072.1;Parent=gene-RM672_RS08865;Dbxref=GenBank:WP_107368072.1;Name=WP_107368072.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=RM672_RS08865;product=cardiolipin synthase;protein_id=WP_107368072.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 97610 98044 . + . ID=gene-RM672_RS08870;Name=RM672_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08870;old_locus_tag=RM672_08865 NZ_JAVRJS010000005.1 Protein Homology CDS 97610 98044 . + 0 ID=cds-WP_157948450.1;Parent=gene-RM672_RS08870;Dbxref=GenBank:WP_157948450.1;Name=WP_157948450.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: protein motif:HMM:NF015925.7;locus_tag=RM672_RS08870;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_157948450.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 98275 99750 . - . ID=gene-RM672_RS08875;Name=RM672_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08875;old_locus_tag=RM672_08870 NZ_JAVRJS010000005.1 Protein Homology CDS 98275 99750 . - 0 ID=cds-WP_107378624.1;Parent=gene-RM672_RS08875;Dbxref=GenBank:WP_107378624.1;Name=WP_107378624.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.7;locus_tag=RM672_RS08875;product=sensor histidine kinase;protein_id=WP_107378624.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 99743 100420 . - . ID=gene-RM672_RS08880;Name=RM672_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08880;old_locus_tag=RM672_08875 NZ_JAVRJS010000005.1 Protein Homology CDS 99743 100420 . - 0 ID=cds-WP_037577090.1;Parent=gene-RM672_RS08880;Dbxref=GenBank:WP_037577090.1;Name=WP_037577090.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478666.1;locus_tag=RM672_RS08880;product=response regulator transcription factor;protein_id=WP_037577090.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 100634 101647 . + . ID=gene-RM672_RS08885;Name=RM672_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08885;old_locus_tag=RM672_08880 NZ_JAVRJS010000005.1 Protein Homology CDS 100634 101647 . + 0 ID=cds-WP_037577093.1;Parent=gene-RM672_RS08885;Dbxref=GenBank:WP_037577093.1;Name=WP_037577093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215650.1;locus_tag=RM672_RS08885;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_037577093.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 101925 102320 . + . ID=gene-RM672_RS08890;Name=RM672_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08890;old_locus_tag=RM672_08885 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 101925 102320 . + 0 ID=cds-WP_107366587.1;Parent=gene-RM672_RS08890;Dbxref=GenBank:WP_107366587.1;Name=WP_107366587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08890;product=hypothetical protein;protein_id=WP_107366587.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 102431 103051 . + . ID=gene-RM672_RS08895;Name=RM672_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08895;old_locus_tag=RM672_08890 NZ_JAVRJS010000005.1 Protein Homology CDS 102431 103051 . + 0 ID=cds-WP_107378623.1;Parent=gene-RM672_RS08895;Dbxref=GenBank:WP_107378623.1;Name=WP_107378623.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912288.1;locus_tag=RM672_RS08895;product=DedA family protein;protein_id=WP_107378623.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 103303 104742 . + . ID=gene-RM672_RS08900;Name=RM672_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08900;old_locus_tag=RM672_08895 NZ_JAVRJS010000005.1 Protein Homology CDS 103303 104742 . + 0 ID=cds-WP_107378622.1;Parent=gene-RM672_RS08900;Dbxref=GenBank:WP_107378622.1;Name=WP_107378622.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506893.1;locus_tag=RM672_RS08900;product=alkaline phosphatase;protein_id=WP_107378622.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 105006 106433 . + . ID=gene-RM672_RS08905;Name=RM672_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08905;old_locus_tag=RM672_08900 NZ_JAVRJS010000005.1 Protein Homology CDS 105006 106433 . + 0 ID=cds-WP_311541404.1;Parent=gene-RM672_RS08905;Dbxref=GenBank:WP_311541404.1;Name=WP_311541404.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501410.1;locus_tag=RM672_RS08905;product=alkaline phosphatase;protein_id=WP_311541404.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 106567 107274 . - . ID=gene-RM672_RS08910;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=RM672_RS08910;old_locus_tag=RM672_08905 NZ_JAVRJS010000005.1 Protein Homology CDS 106567 107274 . - 0 ID=cds-WP_105963293.1;Parent=gene-RM672_RS08910;Dbxref=GenBank:WP_105963293.1;Name=WP_105963293.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=RM672_RS08910;product=acetolactate decarboxylase;protein_id=WP_105963293.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 107412 107804 . + . ID=gene-RM672_RS08915;Name=RM672_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08915;old_locus_tag=RM672_08910 NZ_JAVRJS010000005.1 Protein Homology CDS 107412 107804 . + 0 ID=cds-WP_107366584.1;Parent=gene-RM672_RS08915;Dbxref=GenBank:WP_107366584.1;Name=WP_107366584.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470196.1;locus_tag=RM672_RS08915;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_107366584.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 107807 110677 . + . ID=gene-RM672_RS08920;Name=RM672_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08920;old_locus_tag=RM672_08915 NZ_JAVRJS010000005.1 Protein Homology CDS 107807 110677 . + 0 ID=cds-WP_107366583.1;Parent=gene-RM672_RS08920;Dbxref=GenBank:WP_107366583.1;Name=WP_107366583.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=RM672_RS08920;product=DEAD/DEAH box helicase;protein_id=WP_107366583.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq pseudogene 110867 111554 . + . ID=gene-RM672_RS08925;Name=RM672_RS08925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS08925;old_locus_tag=RM672_08920;pseudo=true NZ_JAVRJS010000005.1 Protein Homology CDS 110867 111554 . + 0 ID=cds-RM672_RS08925;Parent=gene-RM672_RS08925;Note=frameshifted;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436367.1;locus_tag=RM672_RS08925;product=flavin reductase family protein;pseudo=true;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 111683 112162 . + . ID=gene-RM672_RS08930;Name=RM672_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08930;old_locus_tag=RM672_08925 NZ_JAVRJS010000005.1 Protein Homology CDS 111683 112162 . + 0 ID=cds-WP_103159598.1;Parent=gene-RM672_RS08930;Dbxref=GenBank:WP_103159598.1;Name=WP_103159598.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024917.7;locus_tag=RM672_RS08930;product=GNAT family N-acetyltransferase;protein_id=WP_103159598.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 112505 112651 . - . ID=gene-RM672_RS08935;Name=RM672_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08935;old_locus_tag=RM672_08930 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 112505 112651 . - 0 ID=cds-WP_157946134.1;Parent=gene-RM672_RS08935;Dbxref=GenBank:WP_157946134.1;Name=WP_157946134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08935;product=hypothetical protein;protein_id=WP_157946134.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 113418 115034 . + . ID=gene-RM672_RS08940;Name=RM672_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08940;old_locus_tag=RM672_08935 NZ_JAVRJS010000005.1 Protein Homology CDS 113418 115034 . + 0 ID=cds-WP_375712631.1;Parent=gene-RM672_RS08940;Dbxref=GenBank:WP_375712631.1;Name=WP_375712631.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452081.1;locus_tag=RM672_RS08940;product=BCCT family transporter;protein_id=WP_375712631.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 115259 115819 . - . ID=gene-RM672_RS08945;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=RM672_RS08945;old_locus_tag=RM672_08940 NZ_JAVRJS010000005.1 Protein Homology CDS 115259 115819 . - 0 ID=cds-WP_037577119.1;Parent=gene-RM672_RS08945;Dbxref=GenBank:WP_037577119.1;Name=WP_037577119.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198602.1;locus_tag=RM672_RS08945;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_037577119.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 116030 117529 . + . ID=gene-RM672_RS08950;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=RM672_RS08950;old_locus_tag=RM672_08945 NZ_JAVRJS010000005.1 Protein Homology CDS 116030 117529 . + 0 ID=cds-WP_037577122.1;Parent=gene-RM672_RS08950;Dbxref=GenBank:WP_037577122.1;Name=WP_037577122.1;Ontology_term=GO:0031456,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471432.1;locus_tag=RM672_RS08950;product=betaine-aldehyde dehydrogenase;protein_id=WP_037577122.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 117551 119245 . + . ID=gene-RM672_RS08955;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=RM672_RS08955;old_locus_tag=RM672_08950 NZ_JAVRJS010000005.1 Protein Homology CDS 117551 119245 . + 0 ID=cds-WP_103159081.1;Parent=gene-RM672_RS08955;Dbxref=GenBank:WP_103159081.1;Name=WP_103159081.1;Ontology_term=GO:0031456,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=RM672_RS08955;product=choline dehydrogenase;protein_id=WP_103159081.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 119576 120223 . + . ID=gene-RM672_RS08960;Name=RM672_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08960;old_locus_tag=RM672_08955 NZ_JAVRJS010000005.1 GeneMarkS-2+ CDS 119576 120223 . + 0 ID=cds-WP_037577127.1;Parent=gene-RM672_RS08960;Dbxref=GenBank:WP_037577127.1;Name=WP_037577127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS08960;product=zinc ribbon domain-containing protein;protein_id=WP_037577127.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 120248 120697 . + . ID=gene-RM672_RS08965;Name=RM672_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08965;old_locus_tag=RM672_08960 NZ_JAVRJS010000005.1 Protein Homology CDS 120248 120697 . + 0 ID=cds-WP_311541403.1;Parent=gene-RM672_RS08965;Dbxref=GenBank:WP_311541403.1;Name=WP_311541403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899968.1;locus_tag=RM672_RS08965;product=DUF1801 domain-containing protein;protein_id=WP_311541403.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 120904 121953 . + . ID=gene-RM672_RS08970;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM672_RS08970;old_locus_tag=RM672_08965 NZ_JAVRJS010000005.1 Protein Homology CDS 120904 121953 . + 0 ID=cds-WP_311541419.1;Parent=gene-RM672_RS08970;Dbxref=GenBank:WP_311541419.1;Name=WP_311541419.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506553.1;locus_tag=RM672_RS08970;product=ornithine carbamoyltransferase;protein_id=WP_311541419.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 122067 122696 . - . ID=gene-RM672_RS11440;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=RM672_RS11440 NZ_JAVRJS010000005.1 Protein Homology CDS 122067 122696 . - 0 ID=cds-WP_037577133.1;Parent=gene-RM672_RS11440;Dbxref=GenBank:WP_037577133.1;Name=WP_037577133.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=RM672_RS11440;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_037577133.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 122693 123451 . - . ID=gene-RM672_RS11445;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=RM672_RS11445 NZ_JAVRJS010000005.1 Protein Homology CDS 122693 123451 . - 0 ID=cds-WP_105963301.1;Parent=gene-RM672_RS11445;Dbxref=GenBank:WP_105963301.1;Name=WP_105963301.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592599.1;locus_tag=RM672_RS11445;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_105963301.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 123448 124152 . - . ID=gene-RM672_RS08980;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=RM672_RS08980;old_locus_tag=RM672_08975 NZ_JAVRJS010000005.1 Protein Homology CDS 123448 124152 . - 0 ID=cds-WP_037577139.1;Parent=gene-RM672_RS08980;Dbxref=GenBank:WP_037577139.1;Name=WP_037577139.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=RM672_RS08980;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_037577139.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 124145 124720 . - . ID=gene-RM672_RS08985;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=RM672_RS08985;old_locus_tag=RM672_08980 NZ_JAVRJS010000005.1 Protein Homology CDS 124145 124720 . - 0 ID=cds-WP_103159075.1;Parent=gene-RM672_RS08985;Dbxref=GenBank:WP_103159075.1;Name=WP_103159075.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=RM672_RS08985;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_103159075.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 124717 125292 . - . ID=gene-RM672_RS08990;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=RM672_RS08990;old_locus_tag=RM672_08985 NZ_JAVRJS010000005.1 Protein Homology CDS 124717 125292 . - 0 ID=cds-WP_037577145.1;Parent=gene-RM672_RS08990;Dbxref=GenBank:WP_037577145.1;Name=WP_037577145.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640272.1;locus_tag=RM672_RS08990;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_037577145.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 125276 126286 . - . ID=gene-RM672_RS08995;Name=RM672_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS08995;old_locus_tag=RM672_08990 NZ_JAVRJS010000005.1 Protein Homology CDS 125276 126286 . - 0 ID=cds-WP_037577146.1;Parent=gene-RM672_RS08995;Dbxref=GenBank:WP_037577146.1;Name=WP_037577146.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=RM672_RS08995;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_037577146.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 126292 127542 . - . ID=gene-RM672_RS09000;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=RM672_RS09000;old_locus_tag=RM672_08995 NZ_JAVRJS010000005.1 Protein Homology CDS 126292 127542 . - 0 ID=cds-WP_105965685.1;Parent=gene-RM672_RS09000;Dbxref=GenBank:WP_105965685.1;Name=WP_105965685.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302397.1;locus_tag=RM672_RS09000;product=histidinol dehydrogenase;protein_id=WP_105965685.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 127532 128146 . - . ID=gene-RM672_RS09005;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=RM672_RS09005;old_locus_tag=RM672_09000 NZ_JAVRJS010000005.1 Protein Homology CDS 127532 128146 . - 0 ID=cds-WP_037577148.1;Parent=gene-RM672_RS09005;Dbxref=GenBank:WP_037577148.1;Name=WP_037577148.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=RM672_RS09005;product=ATP phosphoribosyltransferase;protein_id=WP_037577148.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq gene 128143 128970 . - . ID=gene-RM672_RS09010;Name=RM672_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09010;old_locus_tag=RM672_09005 NZ_JAVRJS010000005.1 Protein Homology CDS 128143 128970 . - 0 ID=cds-WP_105997038.1;Parent=gene-RM672_RS09010;Dbxref=GenBank:WP_105997038.1;Name=WP_105997038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=RM672_RS09010;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_105997038.1;transl_table=11 NZ_JAVRJS010000005.1 RefSeq pseudogene 129214 129289 . + . ID=gene-RM672_RS09015;Name=RM672_RS09015;end_range=129289,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS09015;old_locus_tag=RM672_09010;partial=true;pseudo=true NZ_JAVRJS010000005.1 Protein Homology CDS 129214 129289 . + 0 ID=cds-RM672_RS09015;Parent=gene-RM672_RS09015;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=129289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM672_RS09015;partial=true;product=deoxyribose-phosphate aldolase;pseudo=true;transl_table=11 ##sequence-region NZ_JAVRJS010000006.1 1 127674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000006.1 RefSeq region 1 127674 . + . ID=NZ_JAVRJS010000006.1:1..127674;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000006.1 RefSeq gene 1 768 . + . ID=gene-RM672_RS09020;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM672_RS09020;old_locus_tag=RM672_09015;partial=true;start_range=.,1 NZ_JAVRJS010000006.1 Protein Homology CDS 1 768 . + 0 ID=cds-WP_311541420.1;Parent=gene-RM672_RS09020;Dbxref=GenBank:WP_311541420.1;Name=WP_311541420.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM672_RS09020;partial=true;product=phosphopentomutase;protein_id=WP_311541420.1;start_range=.,1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 1062 2423 . - . ID=gene-RM672_RS09025;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=RM672_RS09025;old_locus_tag=RM672_09020 NZ_JAVRJS010000006.1 Protein Homology CDS 1062 2423 . - 0 ID=cds-WP_103159691.1;Parent=gene-RM672_RS09025;Dbxref=GenBank:WP_103159691.1;Name=WP_103159691.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016913109.1;locus_tag=RM672_RS09025;product=glycerol-3-phosphate transporter;protein_id=WP_103159691.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 2787 3395 . - . ID=gene-RM672_RS09030;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=RM672_RS09030;old_locus_tag=RM672_09025 NZ_JAVRJS010000006.1 Protein Homology CDS 2787 3395 . - 0 ID=cds-WP_037576096.1;Parent=gene-RM672_RS09030;Dbxref=GenBank:WP_037576096.1;Name=WP_037576096.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438013.1;locus_tag=RM672_RS09030;product=adenylyl-sulfate kinase;protein_id=WP_037576096.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 3411 4586 . - . ID=gene-RM672_RS09035;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=RM672_RS09035;old_locus_tag=RM672_09030 NZ_JAVRJS010000006.1 Protein Homology CDS 3411 4586 . - 0 ID=cds-WP_037576089.1;Parent=gene-RM672_RS09035;Dbxref=GenBank:WP_037576089.1;Name=WP_037576089.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438012.1;locus_tag=RM672_RS09035;product=sulfate adenylyltransferase;protein_id=WP_037576089.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 4601 5497 . - . ID=gene-RM672_RS09040;Name=RM672_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09040;old_locus_tag=RM672_09035 NZ_JAVRJS010000006.1 Protein Homology CDS 4601 5497 . - 0 ID=cds-WP_105965689.1;Parent=gene-RM672_RS09040;Dbxref=GenBank:WP_105965689.1;Name=WP_105965689.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303994.1;locus_tag=RM672_RS09040;product=sulfite exporter TauE/SafE family protein;protein_id=WP_105965689.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 5535 6302 . - . ID=gene-RM672_RS09045;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM672_RS09045;old_locus_tag=RM672_09040 NZ_JAVRJS010000006.1 Protein Homology CDS 5535 6302 . - 0 ID=cds-WP_037576086.1;Parent=gene-RM672_RS09045;Dbxref=GenBank:WP_037576086.1;Name=WP_037576086.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449255.1;locus_tag=RM672_RS09045;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_037576086.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 6335 8065 . - . ID=gene-RM672_RS09050;Name=RM672_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09050;old_locus_tag=RM672_09045 NZ_JAVRJS010000006.1 Protein Homology CDS 6335 8065 . - 0 ID=cds-WP_037576079.1;Parent=gene-RM672_RS09050;Dbxref=GenBank:WP_037576079.1;Name=WP_037576079.1;Ontology_term=GO:0008652,GO:0004783,GO:0051536;gbkey=CDS;go_function=sulfite reductase (NADPH) activity|0004783||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492400.1;locus_tag=RM672_RS09050;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=WP_037576079.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 8090 9958 . - . ID=gene-RM672_RS09055;Name=RM672_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09055;old_locus_tag=RM672_09050 NZ_JAVRJS010000006.1 Protein Homology CDS 8090 9958 . - 0 ID=cds-WP_105966068.1;Parent=gene-RM672_RS09055;Dbxref=GenBank:WP_105966068.1;Name=WP_105966068.1;Ontology_term=GO:0006790,GO:0019344,GO:0004783,GO:0010181,GO:0050660,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfur compound metabolic process|0006790||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=RM672_RS09055;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_105966068.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 10037 10759 . - . ID=gene-RM672_RS09060;Name=RM672_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09060;old_locus_tag=RM672_09055 NZ_JAVRJS010000006.1 Protein Homology CDS 10037 10759 . - 0 ID=cds-WP_037576074.1;Parent=gene-RM672_RS09060;Dbxref=GenBank:WP_037576074.1;Name=WP_037576074.1;Ontology_term=GO:0000103,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000080.1;locus_tag=RM672_RS09060;product=phosphoadenylyl-sulfate reductase;protein_id=WP_037576074.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 11115 12083 . + . ID=gene-RM672_RS09065;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=RM672_RS09065;old_locus_tag=RM672_09060 NZ_JAVRJS010000006.1 Protein Homology CDS 11115 12083 . + 0 ID=cds-WP_037576070.1;Parent=gene-RM672_RS09065;Dbxref=GenBank:WP_037576070.1;Name=WP_037576070.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433253.1;locus_tag=RM672_RS09065;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_037576070.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 12097 12672 . + . ID=gene-RM672_RS09070;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=RM672_RS09070;old_locus_tag=RM672_09065 NZ_JAVRJS010000006.1 Protein Homology CDS 12097 12672 . + 0 ID=cds-WP_037576068.1;Parent=gene-RM672_RS09070;Dbxref=GenBank:WP_037576068.1;Name=WP_037576068.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508379.1;locus_tag=RM672_RS09070;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_037576068.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 12674 13039 . + . ID=gene-RM672_RS09075;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=RM672_RS09075;old_locus_tag=RM672_09070 NZ_JAVRJS010000006.1 Protein Homology CDS 12674 13039 . + 0 ID=cds-WP_037576065.1;Parent=gene-RM672_RS09075;Dbxref=GenBank:WP_037576065.1;Name=WP_037576065.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124168.1;locus_tag=RM672_RS09075;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_037576065.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 13274 14515 . + . ID=gene-RM672_RS09080;Name=RM672_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09080;old_locus_tag=RM672_09075 NZ_JAVRJS010000006.1 Protein Homology CDS 13274 14515 . + 0 ID=cds-WP_037576063.1;Parent=gene-RM672_RS09080;Dbxref=GenBank:WP_037576063.1;Name=WP_037576063.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274967.1;locus_tag=RM672_RS09080;product=aminoacyltransferase;protein_id=WP_037576063.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 14648 14998 . - . ID=gene-RM672_RS09085;Name=RM672_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09085;old_locus_tag=RM672_09080 NZ_JAVRJS010000006.1 Protein Homology CDS 14648 14998 . - 0 ID=cds-WP_037576054.1;Parent=gene-RM672_RS09085;Dbxref=GenBank:WP_037576054.1;Name=WP_037576054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426058.1;locus_tag=RM672_RS09085;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_037576054.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 15248 16627 . + . ID=gene-RM672_RS09090;Name=RM672_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09090;old_locus_tag=RM672_09085 NZ_JAVRJS010000006.1 Protein Homology CDS 15248 16627 . + 0 ID=cds-WP_037576052.1;Parent=gene-RM672_RS09090;Dbxref=GenBank:WP_037576052.1;Name=WP_037576052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=RM672_RS09090;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_037576052.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 16655 16951 . + . ID=gene-RM672_RS09095;Name=RM672_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09095;old_locus_tag=RM672_09090 NZ_JAVRJS010000006.1 GeneMarkS-2+ CDS 16655 16951 . + 0 ID=cds-WP_037576050.1;Parent=gene-RM672_RS09095;Dbxref=GenBank:WP_037576050.1;Name=WP_037576050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09095;product=hypothetical protein;protein_id=WP_037576050.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 17304 18260 . + . ID=gene-RM672_RS09100;Name=RM672_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09100;old_locus_tag=RM672_09095 NZ_JAVRJS010000006.1 Protein Homology CDS 17304 18260 . + 0 ID=cds-WP_037576037.1;Parent=gene-RM672_RS09100;Dbxref=GenBank:WP_037576037.1;Name=WP_037576037.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=RM672_RS09100;product=alpha/beta hydrolase;protein_id=WP_037576037.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 18292 19050 . + . ID=gene-RM672_RS09105;Name=RM672_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09105;old_locus_tag=RM672_09100 NZ_JAVRJS010000006.1 Protein Homology CDS 18292 19050 . + 0 ID=cds-WP_051604997.1;Parent=gene-RM672_RS09105;Dbxref=GenBank:WP_051604997.1;Name=WP_051604997.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.7;locus_tag=RM672_RS09105;product=MerR family transcriptional regulator;protein_id=WP_051604997.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 19217 21190 . + . ID=gene-RM672_RS09110;Name=RM672_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09110;old_locus_tag=RM672_09105 NZ_JAVRJS010000006.1 Protein Homology CDS 19217 21190 . + 0 ID=cds-WP_037576034.1;Parent=gene-RM672_RS09110;Dbxref=GenBank:WP_037576034.1;Name=WP_037576034.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480244.1;locus_tag=RM672_RS09110;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_037576034.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 21258 22589 . - . ID=gene-RM672_RS09115;Name=RM672_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09115;old_locus_tag=RM672_09110 NZ_JAVRJS010000006.1 Protein Homology CDS 21258 22589 . - 0 ID=cds-WP_051604996.1;Parent=gene-RM672_RS09115;Dbxref=GenBank:WP_051604996.1;Name=WP_051604996.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: protein motif:HMM:NF013954.7;locus_tag=RM672_RS09115;product=glucosaminidase domain-containing protein;protein_id=WP_051604996.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 22784 24532 . + . ID=gene-RM672_RS09120;Name=RM672_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09120;old_locus_tag=RM672_09115 NZ_JAVRJS010000006.1 Protein Homology CDS 22784 24532 . + 0 ID=cds-WP_105965691.1;Parent=gene-RM672_RS09120;Dbxref=GenBank:WP_105965691.1;Name=WP_105965691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM672_RS09120;product=YhgE/Pip domain-containing protein;protein_id=WP_105965691.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 24585 24932 . + . ID=gene-RM672_RS09125;Name=RM672_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09125;old_locus_tag=RM672_09120 NZ_JAVRJS010000006.1 Protein Homology CDS 24585 24932 . + 0 ID=cds-WP_037576029.1;Parent=gene-RM672_RS09125;Dbxref=GenBank:WP_037576029.1;Name=WP_037576029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016839079.1;locus_tag=RM672_RS09125;product=DUF2200 domain-containing protein;protein_id=WP_037576029.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 25056 25580 . - . ID=gene-RM672_RS09130;Name=RM672_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09130;old_locus_tag=RM672_09125 NZ_JAVRJS010000006.1 GeneMarkS-2+ CDS 25056 25580 . - 0 ID=cds-WP_311542499.1;Parent=gene-RM672_RS09130;Dbxref=GenBank:WP_311542499.1;Name=WP_311542499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09130;product=hypothetical protein;protein_id=WP_311542499.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 25791 26051 . - . ID=gene-RM672_RS11450;Name=RM672_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11450 NZ_JAVRJS010000006.1 Protein Homology CDS 25791 26051 . - 0 ID=cds-WP_084276063.1;Parent=gene-RM672_RS11450;Dbxref=GenBank:WP_084276063.1;Name=WP_084276063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018554.7;locus_tag=RM672_RS11450;product=YozE family protein;protein_id=WP_084276063.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 26229 26951 . + . ID=gene-RM672_RS09135;Name=RM672_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09135;old_locus_tag=RM672_09130 NZ_JAVRJS010000006.1 Protein Homology CDS 26229 26951 . + 0 ID=cds-WP_037576020.1;Parent=gene-RM672_RS09135;Dbxref=GenBank:WP_037576020.1;Name=WP_037576020.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501364.1;locus_tag=RM672_RS09135;product=epoxyqueuosine reductase QueH;protein_id=WP_037576020.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 27087 28574 . + . ID=gene-RM672_RS09140;Name=RM672_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09140;old_locus_tag=RM672_09135 NZ_JAVRJS010000006.1 Protein Homology CDS 27087 28574 . + 0 ID=cds-WP_103159674.1;Parent=gene-RM672_RS09140;Dbxref=GenBank:WP_103159674.1;Name=WP_103159674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=RM672_RS09140;product=ABC transporter substrate-binding protein;protein_id=WP_103159674.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 28564 29550 . + . ID=gene-RM672_RS09145;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=RM672_RS09145;old_locus_tag=RM672_09140 NZ_JAVRJS010000006.1 Protein Homology CDS 28564 29550 . + 0 ID=cds-WP_037576018.1;Parent=gene-RM672_RS09145;Dbxref=GenBank:WP_037576018.1;Name=WP_037576018.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636982.1;locus_tag=RM672_RS09145;product=nickel ABC transporter permease;protein_id=WP_037576018.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 29547 30350 . + . ID=gene-RM672_RS09150;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=RM672_RS09150;old_locus_tag=RM672_09145 NZ_JAVRJS010000006.1 Protein Homology CDS 29547 30350 . + 0 ID=cds-WP_051604994.1;Parent=gene-RM672_RS09150;Dbxref=GenBank:WP_051604994.1;Name=WP_051604994.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302255.1;locus_tag=RM672_RS09150;product=nickel transporter permease;protein_id=WP_051604994.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 30352 31122 . + . ID=gene-RM672_RS09155;Name=RM672_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09155;old_locus_tag=RM672_09150 NZ_JAVRJS010000006.1 Protein Homology CDS 30352 31122 . + 0 ID=cds-WP_037576016.1;Parent=gene-RM672_RS09155;Dbxref=GenBank:WP_037576016.1;Name=WP_037576016.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=RM672_RS09155;product=ATP-binding cassette domain-containing protein;protein_id=WP_037576016.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 31119 31808 . + . ID=gene-RM672_RS09160;Name=RM672_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09160;old_locus_tag=RM672_09155 NZ_JAVRJS010000006.1 Protein Homology CDS 31119 31808 . + 0 ID=cds-WP_037576014.1;Parent=gene-RM672_RS09160;Dbxref=GenBank:WP_037576014.1;Name=WP_037576014.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM672_RS09160;product=ABC transporter ATP-binding protein;protein_id=WP_037576014.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 31921 34089 . - . ID=gene-RM672_RS09165;Name=RM672_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09165;old_locus_tag=RM672_09160 NZ_JAVRJS010000006.1 Protein Homology CDS 31921 34089 . - 0 ID=cds-WP_084276061.1;Parent=gene-RM672_RS09165;Dbxref=GenBank:WP_084276061.1;Name=WP_084276061.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911044.1;locus_tag=RM672_RS09165;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_084276061.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 34209 37406 . - . ID=gene-RM672_RS09170;Name=RM672_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09170;old_locus_tag=RM672_09165 NZ_JAVRJS010000006.1 Protein Homology CDS 34209 37406 . - 0 ID=cds-WP_037576011.1;Parent=gene-RM672_RS09170;Dbxref=GenBank:WP_037576011.1;Name=WP_037576011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003757592.1;locus_tag=RM672_RS09170;product=CDP-glycerol--glycerophosphate glycerophosphotransferase;protein_id=WP_037576011.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 37512 38924 . + . ID=gene-RM672_RS09175;Name=RM672_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09175;old_locus_tag=RM672_09170 NZ_JAVRJS010000006.1 Protein Homology CDS 37512 38924 . + 0 ID=cds-WP_037576008.1;Parent=gene-RM672_RS09175;Dbxref=GenBank:WP_037576008.1;Name=WP_037576008.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=RM672_RS09175;product=glycosyltransferase family 2 protein;protein_id=WP_037576008.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 39594 39686 . + . ID=gene-RM672_RS11455;Name=RM672_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11455 NZ_JAVRJS010000006.1 Protein Homology CDS 39594 39686 . + 0 ID=cds-WP_375712558.1;Parent=gene-RM672_RS11455;Dbxref=GenBank:WP_375712558.1;Name=WP_375712558.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039855.6;locus_tag=RM672_RS11455;product=DUF5776 domain-containing protein;protein_id=WP_375712558.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 39705 41186 . + . ID=gene-RM672_RS09180;Name=RM672_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09180;old_locus_tag=RM672_09175 NZ_JAVRJS010000006.1 Protein Homology CDS 39705 41186 . + 0 ID=cds-WP_037576004.1;Parent=gene-RM672_RS09180;Dbxref=GenBank:WP_037576004.1;Name=WP_037576004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.6;locus_tag=RM672_RS09180;product=DUF6056 family protein;protein_id=WP_037576004.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 41320 42789 . - . ID=gene-RM672_RS09185;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=RM672_RS09185;old_locus_tag=RM672_09180 NZ_JAVRJS010000006.1 Protein Homology CDS 41320 42789 . - 0 ID=cds-WP_037576002.1;Parent=gene-RM672_RS09185;Dbxref=GenBank:WP_037576002.1;Name=WP_037576002.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471199.1;locus_tag=RM672_RS09185;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_037576002.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 43173 45332 . + . ID=gene-RM672_RS09190;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=RM672_RS09190;old_locus_tag=RM672_09185 NZ_JAVRJS010000006.1 Protein Homology CDS 43173 45332 . + 0 ID=cds-WP_311542500.1;Parent=gene-RM672_RS09190;Dbxref=GenBank:WP_311542500.1;Name=WP_311542500.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: protein motif:HMM:NF047351.1;locus_tag=RM672_RS09190;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_311542500.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 45303 45584 . - . ID=gene-RM672_RS11460;Name=RM672_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11460 NZ_JAVRJS010000006.1 Protein Homology CDS 45303 45584 . - 0 ID=cds-WP_105963364.1;Parent=gene-RM672_RS11460;Dbxref=GenBank:WP_105963364.1;Name=WP_105963364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.7;locus_tag=RM672_RS11460;product=transposase;protein_id=WP_105963364.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq pseudogene 45595 46062 . + . ID=gene-RM672_RS09200;Name=RM672_RS09200;end_range=46062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS09200;old_locus_tag=RM672_09195;partial=true;pseudo=true;start_range=.,45595 NZ_JAVRJS010000006.1 Protein Homology CDS 45595 46062 . + 0 ID=cds-RM672_RS09200;Parent=gene-RM672_RS09200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=46062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489261.1;locus_tag=RM672_RS09200;partial=true;product=DUF536 domain-containing protein;pseudo=true;start_range=.,45595;transl_table=11 NZ_JAVRJS010000006.1 RefSeq pseudogene 46071 46548 . - . ID=gene-RM672_RS09205;Name=RM672_RS09205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS09205;old_locus_tag=RM672_09200;partial=true;pseudo=true;start_range=.,46071 NZ_JAVRJS010000006.1 Protein Homology CDS 46071 46548 . - 0 ID=cds-RM672_RS09205;Parent=gene-RM672_RS09205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690624.1;locus_tag=RM672_RS09205;partial=true;product=recombinase family protein;pseudo=true;start_range=.,46071;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 46894 47559 . - . ID=gene-RM672_RS09210;Name=RM672_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09210;old_locus_tag=RM672_09205 NZ_JAVRJS010000006.1 Protein Homology CDS 46894 47559 . - 0 ID=cds-WP_107360822.1;Parent=gene-RM672_RS09210;Dbxref=GenBank:WP_107360822.1;Name=WP_107360822.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479812.1;locus_tag=RM672_RS09210;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_107360822.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 47716 48579 . + . ID=gene-RM672_RS09215;Name=RM672_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09215;old_locus_tag=RM672_09210 NZ_JAVRJS010000006.1 Protein Homology CDS 47716 48579 . + 0 ID=cds-WP_105965701.1;Parent=gene-RM672_RS09215;Dbxref=GenBank:WP_105965701.1;Name=WP_105965701.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=RM672_RS09215;product=fructosamine kinase family protein;protein_id=WP_105965701.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 48603 48977 . + . ID=gene-RM672_RS09220;Name=RM672_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09220;old_locus_tag=RM672_09215 NZ_JAVRJS010000006.1 Protein Homology CDS 48603 48977 . + 0 ID=cds-WP_037575989.1;Parent=gene-RM672_RS09220;Dbxref=GenBank:WP_037575989.1;Name=WP_037575989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019468.7;locus_tag=RM672_RS09220;product=DUF1648 domain-containing protein;protein_id=WP_037575989.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 49071 49670 . - . ID=gene-RM672_RS09225;Name=RM672_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09225;old_locus_tag=RM672_09220 NZ_JAVRJS010000006.1 Protein Homology CDS 49071 49670 . - 0 ID=cds-WP_051604993.1;Parent=gene-RM672_RS09225;Dbxref=GenBank:WP_051604993.1;Name=WP_051604993.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016764.7;locus_tag=RM672_RS09225;product=YIP1 family protein;protein_id=WP_051604993.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 49930 50970 . + . ID=gene-RM672_RS09230;Name=RM672_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09230;old_locus_tag=RM672_09225 NZ_JAVRJS010000006.1 Protein Homology CDS 49930 50970 . + 0 ID=cds-WP_311541443.1;Parent=gene-RM672_RS09230;Dbxref=GenBank:WP_311541443.1;Name=WP_311541443.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451536.1;locus_tag=RM672_RS09230;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_311541443.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 50967 51653 . + . ID=gene-RM672_RS09235;Name=RM672_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09235;old_locus_tag=RM672_09230 NZ_JAVRJS010000006.1 Protein Homology CDS 50967 51653 . + 0 ID=cds-WP_037575988.1;Parent=gene-RM672_RS09235;Dbxref=GenBank:WP_037575988.1;Name=WP_037575988.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466413.1;locus_tag=RM672_RS09235;product=ABC transporter ATP-binding protein;protein_id=WP_037575988.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 51646 52833 . + . ID=gene-RM672_RS09240;Name=RM672_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09240;old_locus_tag=RM672_09235 NZ_JAVRJS010000006.1 Protein Homology CDS 51646 52833 . + 0 ID=cds-WP_107366626.1;Parent=gene-RM672_RS09240;Dbxref=GenBank:WP_107366626.1;Name=WP_107366626.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=RM672_RS09240;product=ABC transporter permease;protein_id=WP_107366626.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 53709 54917 . + . ID=gene-RM672_RS09245;Name=RM672_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09245;old_locus_tag=RM672_09240 NZ_JAVRJS010000006.1 Protein Homology CDS 53709 54917 . + 0 ID=cds-WP_375712632.1;Parent=gene-RM672_RS09245;Dbxref=GenBank:WP_375712632.1;Name=WP_375712632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467283.1;locus_tag=RM672_RS09245;product=serine hydrolase domain-containing protein;protein_id=WP_375712632.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 55073 55207 . + . ID=gene-RM672_RS09250;Name=RM672_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09250;old_locus_tag=RM672_09245 NZ_JAVRJS010000006.1 GeneMarkS-2+ CDS 55073 55207 . + 0 ID=cds-WP_255201448.1;Parent=gene-RM672_RS09250;Dbxref=GenBank:WP_255201448.1;Name=WP_255201448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09250;product=hypothetical protein;protein_id=WP_255201448.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 55234 55902 . + . ID=gene-RM672_RS09255;Name=RM672_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09255;old_locus_tag=RM672_09250 NZ_JAVRJS010000006.1 Protein Homology CDS 55234 55902 . + 0 ID=cds-WP_311541424.1;Parent=gene-RM672_RS09255;Dbxref=GenBank:WP_311541424.1;Name=WP_311541424.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.7;locus_tag=RM672_RS09255;product=response regulator transcription factor;protein_id=WP_311541424.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 55899 57050 . + . ID=gene-RM672_RS09260;Name=RM672_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09260;old_locus_tag=RM672_09255 NZ_JAVRJS010000006.1 Protein Homology CDS 55899 57050 . + 0 ID=cds-WP_311541425.1;Parent=gene-RM672_RS09260;Dbxref=GenBank:WP_311541425.1;Name=WP_311541425.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636325.1;locus_tag=RM672_RS09260;product=sensor histidine kinase;protein_id=WP_311541425.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 57119 57535 . + . ID=gene-RM672_RS09265;Name=RM672_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09265;old_locus_tag=RM672_09260 NZ_JAVRJS010000006.1 Protein Homology CDS 57119 57535 . + 0 ID=cds-WP_037575979.1;Parent=gene-RM672_RS09265;Dbxref=GenBank:WP_037575979.1;Name=WP_037575979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931400.1;locus_tag=RM672_RS09265;product=DUF2231 domain-containing protein;protein_id=WP_037575979.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 57550 58485 . + . ID=gene-RM672_RS09270;Name=RM672_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09270;old_locus_tag=RM672_09265 NZ_JAVRJS010000006.1 Protein Homology CDS 57550 58485 . + 0 ID=cds-WP_311541426.1;Parent=gene-RM672_RS09270;Dbxref=GenBank:WP_311541426.1;Name=WP_311541426.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=RM672_RS09270;product=cation diffusion facilitator family transporter;protein_id=WP_311541426.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 58596 59273 . + . ID=gene-RM672_RS09275;Name=RM672_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09275;old_locus_tag=RM672_09270 NZ_JAVRJS010000006.1 Protein Homology CDS 58596 59273 . + 0 ID=cds-WP_107370487.1;Parent=gene-RM672_RS09275;Dbxref=GenBank:WP_107370487.1;Name=WP_107370487.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712443.1;locus_tag=RM672_RS09275;product=DUF554 domain-containing protein;protein_id=WP_107370487.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 59443 60381 . - . ID=gene-RM672_RS09280;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=RM672_RS09280;old_locus_tag=RM672_09275 NZ_JAVRJS010000006.1 Protein Homology CDS 59443 60381 . - 0 ID=cds-WP_103159509.1;Parent=gene-RM672_RS09280;Dbxref=GenBank:WP_103159509.1;Name=WP_103159509.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426091.1;locus_tag=RM672_RS09280;product=urea transporter;protein_id=WP_103159509.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 60591 60893 . + . ID=gene-RM672_RS09285;Name=RM672_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09285;old_locus_tag=RM672_09280 NZ_JAVRJS010000006.1 Protein Homology CDS 60591 60893 . + 0 ID=cds-WP_037575964.1;Parent=gene-RM672_RS09285;Dbxref=GenBank:WP_037575964.1;Name=WP_037575964.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=RM672_RS09285;product=urease subunit gamma;protein_id=WP_037575964.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 60905 61261 . + . ID=gene-RM672_RS09290;Name=RM672_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09290;old_locus_tag=RM672_09285 NZ_JAVRJS010000006.1 Protein Homology CDS 60905 61261 . + 0 ID=cds-WP_037575963.1;Parent=gene-RM672_RS09290;Dbxref=GenBank:WP_037575963.1;Name=WP_037575963.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=RM672_RS09290;product=urease subunit beta;protein_id=WP_037575963.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 61258 62973 . + . ID=gene-RM672_RS09295;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=RM672_RS09295;old_locus_tag=RM672_09290 NZ_JAVRJS010000006.1 Protein Homology CDS 61258 62973 . + 0 ID=cds-WP_105966058.1;Parent=gene-RM672_RS09295;Dbxref=GenBank:WP_105966058.1;Name=WP_105966058.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=RM672_RS09295;product=urease subunit alpha;protein_id=WP_105966058.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 63261 63806 . + . ID=gene-RM672_RS09300;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=RM672_RS09300;old_locus_tag=RM672_09295 NZ_JAVRJS010000006.1 Protein Homology CDS 63261 63806 . + 0 ID=cds-WP_037575957.1;Parent=gene-RM672_RS09300;Dbxref=GenBank:WP_037575957.1;Name=WP_037575957.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=RM672_RS09300;product=dCTP deaminase;protein_id=WP_037575957.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 63806 64705 . + . ID=gene-RM672_RS09305;Name=RM672_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09305;old_locus_tag=RM672_09300 NZ_JAVRJS010000006.1 Protein Homology CDS 63806 64705 . + 0 ID=cds-WP_105965714.1;Parent=gene-RM672_RS09305;Dbxref=GenBank:WP_105965714.1;Name=WP_105965714.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=RM672_RS09305;product=CobW family GTP-binding protein;protein_id=WP_105965714.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 65052 65474 . + . ID=gene-RM672_RS09310;Name=RM672_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09310;old_locus_tag=RM672_09305 NZ_JAVRJS010000006.1 Protein Homology CDS 65052 65474 . + 0 ID=cds-WP_037575946.1;Parent=gene-RM672_RS09310;Dbxref=GenBank:WP_037575946.1;Name=WP_037575946.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=RM672_RS09310;product=universal stress protein;protein_id=WP_037575946.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 65672 66982 . + . ID=gene-RM672_RS09315;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=RM672_RS09315;old_locus_tag=RM672_09310 NZ_JAVRJS010000006.1 Protein Homology CDS 65672 66982 . + 0 ID=cds-WP_103159505.1;Parent=gene-RM672_RS09315;Dbxref=GenBank:WP_103159505.1;Name=WP_103159505.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829028.1;locus_tag=RM672_RS09315;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_103159505.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 67024 67377 . - . ID=gene-RM672_RS09320;Name=RM672_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09320;old_locus_tag=RM672_09315 NZ_JAVRJS010000006.1 Protein Homology CDS 67024 67377 . - 0 ID=cds-WP_103159504.1;Parent=gene-RM672_RS09320;Dbxref=GenBank:WP_103159504.1;Name=WP_103159504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482245.1;locus_tag=RM672_RS09320;product=DUF488 domain-containing protein;protein_id=WP_103159504.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 67568 67747 . + . ID=gene-RM672_RS09325;Name=RM672_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09325;old_locus_tag=RM672_09320 NZ_JAVRJS010000006.1 Protein Homology CDS 67568 67747 . + 0 ID=cds-WP_037575940.1;Parent=gene-RM672_RS09325;Dbxref=GenBank:WP_037575940.1;Name=WP_037575940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=RM672_RS09325;product=hypothetical protein;protein_id=WP_037575940.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 68214 68753 . + . ID=gene-RM672_RS09330;Name=RM672_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09330;old_locus_tag=RM672_09325 NZ_JAVRJS010000006.1 Protein Homology CDS 68214 68753 . + 0 ID=cds-WP_037575938.1;Parent=gene-RM672_RS09330;Dbxref=GenBank:WP_037575938.1;Name=WP_037575938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF058244.1;locus_tag=RM672_RS09330;product=SA1002 family membrane protein;protein_id=WP_037575938.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 68895 69863 . + . ID=gene-RM672_RS09335;Name=RM672_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09335;old_locus_tag=RM672_09330 NZ_JAVRJS010000006.1 Protein Homology CDS 68895 69863 . + 0 ID=cds-WP_311541427.1;Parent=gene-RM672_RS09335;Dbxref=GenBank:WP_311541427.1;Name=WP_311541427.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426110.1;locus_tag=RM672_RS09335;product=ABC transporter permease;protein_id=WP_311541427.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 69853 70812 . + . ID=gene-RM672_RS09340;Name=RM672_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09340;old_locus_tag=RM672_09335 NZ_JAVRJS010000006.1 Protein Homology CDS 69853 70812 . + 0 ID=cds-WP_105963343.1;Parent=gene-RM672_RS09340;Dbxref=GenBank:WP_105963343.1;Name=WP_105963343.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426111.1;locus_tag=RM672_RS09340;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_105963343.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 70809 71612 . + . ID=gene-RM672_RS09345;Name=RM672_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09345;old_locus_tag=RM672_09340 NZ_JAVRJS010000006.1 Protein Homology CDS 70809 71612 . + 0 ID=cds-WP_105963344.1;Parent=gene-RM672_RS09345;Dbxref=GenBank:WP_105963344.1;Name=WP_105963344.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449075.1;locus_tag=RM672_RS09345;product=iron ABC transporter ATP-binding protein;protein_id=WP_105963344.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 71628 72662 . + . ID=gene-RM672_RS09350;Name=RM672_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09350;old_locus_tag=RM672_09345 NZ_JAVRJS010000006.1 Protein Homology CDS 71628 72662 . + 0 ID=cds-WP_037575928.1;Parent=gene-RM672_RS09350;Dbxref=GenBank:WP_037575928.1;Name=WP_037575928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426114.1;locus_tag=RM672_RS09350;product=ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD;protein_id=WP_037575928.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq pseudogene 72854 74050 . - . ID=gene-RM672_RS09355;Name=lip;end_range=74050,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=RM672_RS09355;old_locus_tag=RM672_09350;partial=true;pseudo=true NZ_JAVRJS010000006.1 Protein Homology CDS 72854 74050 . - 0 ID=cds-RM672_RS09355;Parent=gene-RM672_RS09355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=74050,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364631.1;locus_tag=RM672_RS09355;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 74592 75023 . - . ID=gene-RM672_RS09360;Name=RM672_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09360;old_locus_tag=RM672_09355 NZ_JAVRJS010000006.1 Protein Homology CDS 74592 75023 . - 0 ID=cds-WP_037575924.1;Parent=gene-RM672_RS09360;Dbxref=GenBank:WP_037575924.1;Name=WP_037575924.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289218.1;locus_tag=RM672_RS09360;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575924.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 75160 75780 . + . ID=gene-RM672_RS09365;Name=RM672_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09365;old_locus_tag=RM672_09360 NZ_JAVRJS010000006.1 Protein Homology CDS 75160 75780 . + 0 ID=cds-WP_105963345.1;Parent=gene-RM672_RS09365;Dbxref=GenBank:WP_105963345.1;Name=WP_105963345.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449496.1;locus_tag=RM672_RS09365;product=nitroreductase family protein;protein_id=WP_105963345.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 75884 76597 . + . ID=gene-RM672_RS09370;Name=RM672_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09370;old_locus_tag=RM672_09365 NZ_JAVRJS010000006.1 Protein Homology CDS 75884 76597 . + 0 ID=cds-WP_037575919.1;Parent=gene-RM672_RS09370;Dbxref=GenBank:WP_037575919.1;Name=WP_037575919.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912759.1;locus_tag=RM672_RS09370;product=GTP pyrophosphokinase;protein_id=WP_037575919.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 76635 77204 . - . ID=gene-RM672_RS09375;Name=RM672_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09375;old_locus_tag=RM672_09370 NZ_JAVRJS010000006.1 Protein Homology CDS 76635 77204 . - 0 ID=cds-WP_051604991.1;Parent=gene-RM672_RS09375;Dbxref=GenBank:WP_051604991.1;Name=WP_051604991.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382209.1;locus_tag=RM672_RS09375;product=M23 family metallopeptidase;protein_id=WP_051604991.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 77685 78083 . - . ID=gene-RM672_RS09380;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=RM672_RS09380;old_locus_tag=RM672_09375 NZ_JAVRJS010000006.1 Protein Homology CDS 77685 78083 . - 0 ID=cds-WP_037575917.1;Parent=gene-RM672_RS09380;Dbxref=GenBank:WP_037575917.1;Name=WP_037575917.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM672_RS09380;product=arsenate reductase (thioredoxin);protein_id=WP_037575917.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 78101 79390 . - . ID=gene-RM672_RS09385;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=RM672_RS09385;old_locus_tag=RM672_09380 NZ_JAVRJS010000006.1 Protein Homology CDS 78101 79390 . - 0 ID=cds-WP_311541102.1;Parent=gene-RM672_RS09385;Dbxref=GenBank:WP_311541102.1;Name=WP_311541102.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=RM672_RS09385;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_311541102.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 79387 79704 . - . ID=gene-RM672_RS09390;Name=RM672_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09390;old_locus_tag=RM672_09385 NZ_JAVRJS010000006.1 Protein Homology CDS 79387 79704 . - 0 ID=cds-WP_037575913.1;Parent=gene-RM672_RS09390;Dbxref=GenBank:WP_037575913.1;Name=WP_037575913.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120606.1;locus_tag=RM672_RS09390;product=ArsR/SmtB family transcription factor;protein_id=WP_037575913.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 80197 81057 . - . ID=gene-RM672_RS09395;Name=RM672_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09395;old_locus_tag=RM672_09390 NZ_JAVRJS010000006.1 Protein Homology CDS 80197 81057 . - 0 ID=cds-WP_037575911.1;Parent=gene-RM672_RS09395;Dbxref=GenBank:WP_037575911.1;Name=WP_037575911.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725232.1;locus_tag=RM672_RS09395;product=CHAP domain-containing protein;protein_id=WP_037575911.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 81717 82412 . - . ID=gene-RM672_RS09400;Name=RM672_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09400;old_locus_tag=RM672_09395 NZ_JAVRJS010000006.1 Protein Homology CDS 81717 82412 . - 0 ID=cds-WP_105963346.1;Parent=gene-RM672_RS09400;Dbxref=GenBank:WP_105963346.1;Name=WP_105963346.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499548.1;locus_tag=RM672_RS09400;product=transglycosylase family protein;protein_id=WP_105963346.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 82834 84252 . + . ID=gene-RM672_RS09405;Name=RM672_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09405;old_locus_tag=RM672_09400 NZ_JAVRJS010000006.1 Protein Homology CDS 82834 84252 . + 0 ID=cds-WP_037575901.1;Parent=gene-RM672_RS09405;Dbxref=GenBank:WP_037575901.1;Name=WP_037575901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=RM672_RS09405;product=phosphate--AMP phosphotransferase;protein_id=WP_037575901.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 84364 85245 . + . ID=gene-RM672_RS09410;Name=RM672_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09410;old_locus_tag=RM672_09405 NZ_JAVRJS010000006.1 Protein Homology CDS 84364 85245 . + 0 ID=cds-WP_311541428.1;Parent=gene-RM672_RS09410;Dbxref=GenBank:WP_311541428.1;Name=WP_311541428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=RM672_RS09410;product=alpha/beta fold hydrolase;protein_id=WP_311541428.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 85304 85939 . + . ID=gene-RM672_RS09415;Name=RM672_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09415;old_locus_tag=RM672_09410 NZ_JAVRJS010000006.1 Protein Homology CDS 85304 85939 . + 0 ID=cds-WP_037575898.1;Parent=gene-RM672_RS09415;Dbxref=GenBank:WP_037575898.1;Name=WP_037575898.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF016115.7;locus_tag=RM672_RS09415;product=cyclase family protein;protein_id=WP_037575898.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 85981 87195 . + . ID=gene-RM672_RS09420;Name=RM672_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09420;old_locus_tag=RM672_09415 NZ_JAVRJS010000006.1 Protein Homology CDS 85981 87195 . + 0 ID=cds-WP_311541429.1;Parent=gene-RM672_RS09420;Dbxref=GenBank:WP_311541429.1;Name=WP_311541429.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510051.1;locus_tag=RM672_RS09420;product=Bcr/CflA family efflux MFS transporter;protein_id=WP_311541429.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 87276 87482 . - . ID=gene-RM672_RS09425;Name=RM672_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09425;old_locus_tag=RM672_09420 NZ_JAVRJS010000006.1 GeneMarkS-2+ CDS 87276 87482 . - 0 ID=cds-WP_311541430.1;Parent=gene-RM672_RS09425;Dbxref=GenBank:WP_311541430.1;Name=WP_311541430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09425;product=hypothetical protein;protein_id=WP_311541430.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 87716 92596 . + . ID=gene-RM672_RS09430;Name=RM672_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09430;old_locus_tag=RM672_09425 NZ_JAVRJS010000006.1 Protein Homology CDS 87716 92596 . + 0 ID=cds-WP_311541431.1;Parent=gene-RM672_RS09430;Dbxref=GenBank:WP_311541431.1;Name=WP_311541431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.7;locus_tag=RM672_RS09430;product=Ig-like domain-containing protein;protein_id=WP_311541431.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 92803 93669 . - . ID=gene-RM672_RS09435;Name=RM672_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09435;old_locus_tag=RM672_09430 NZ_JAVRJS010000006.1 Protein Homology CDS 92803 93669 . - 0 ID=cds-WP_037575890.1;Parent=gene-RM672_RS09435;Dbxref=GenBank:WP_037575890.1;Name=WP_037575890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835151.1;locus_tag=RM672_RS09435;product=SDR family oxidoreductase;protein_id=WP_037575890.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 93690 95690 . - . ID=gene-RM672_RS09440;Name=RM672_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09440;old_locus_tag=RM672_09435 NZ_JAVRJS010000006.1 Protein Homology CDS 93690 95690 . - 0 ID=cds-WP_105963352.1;Parent=gene-RM672_RS09440;Dbxref=GenBank:WP_105963352.1;Name=WP_105963352.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=RM672_RS09440;product=catalase;protein_id=WP_105963352.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 95946 97070 . + . ID=gene-RM672_RS09445;Name=RM672_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09445;old_locus_tag=RM672_09440 NZ_JAVRJS010000006.1 Protein Homology CDS 95946 97070 . + 0 ID=cds-WP_037575886.1;Parent=gene-RM672_RS09445;Dbxref=GenBank:WP_037575886.1;Name=WP_037575886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=RM672_RS09445;product=hypothetical protein;protein_id=WP_037575886.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 97297 98439 . + . ID=gene-RM672_RS09450;Name=RM672_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09450;old_locus_tag=RM672_09445 NZ_JAVRJS010000006.1 Protein Homology CDS 97297 98439 . + 0 ID=cds-WP_103159556.1;Parent=gene-RM672_RS09450;Dbxref=GenBank:WP_103159556.1;Name=WP_103159556.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006983.1;locus_tag=RM672_RS09450;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_103159556.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 98485 98661 . - . ID=gene-RM672_RS09455;Name=RM672_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09455;old_locus_tag=RM672_09450 NZ_JAVRJS010000006.1 Protein Homology CDS 98485 98661 . - 0 ID=cds-WP_142382081.1;Parent=gene-RM672_RS09455;Dbxref=GenBank:WP_142382081.1;Name=WP_142382081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033835.0;locus_tag=RM672_RS09455;product=VraH family peptide resistance protein;protein_id=WP_142382081.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 98873 99073 . - . ID=gene-RM672_RS09460;Name=RM672_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09460;old_locus_tag=RM672_09455 NZ_JAVRJS010000006.1 Protein Homology CDS 98873 99073 . - 0 ID=cds-WP_037575879.1;Parent=gene-RM672_RS09460;Dbxref=GenBank:WP_037575879.1;Name=WP_037575879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM672_RS09460;product=VraH family peptide resistance protein;protein_id=WP_037575879.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 99202 100086 . + . ID=gene-RM672_RS09465;Name=RM672_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09465;old_locus_tag=RM672_09460 NZ_JAVRJS010000006.1 Protein Homology CDS 99202 100086 . + 0 ID=cds-WP_105963355.1;Parent=gene-RM672_RS09465;Dbxref=GenBank:WP_105963355.1;Name=WP_105963355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010990549.1;locus_tag=RM672_RS09465;product=SDR family oxidoreductase;protein_id=WP_105963355.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 100321 101775 . + . ID=gene-RM672_RS09470;Name=RM672_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09470;old_locus_tag=RM672_09465 NZ_JAVRJS010000006.1 GeneMarkS-2+ CDS 100321 101775 . + 0 ID=cds-WP_311541432.1;Parent=gene-RM672_RS09470;Dbxref=GenBank:WP_311541432.1;Name=WP_311541432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09470;product=hypothetical protein;protein_id=WP_311541432.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 102130 102792 . + . ID=gene-RM672_RS09475;Name=RM672_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09475;old_locus_tag=RM672_09470 NZ_JAVRJS010000006.1 Protein Homology CDS 102130 102792 . + 0 ID=cds-WP_311541433.1;Parent=gene-RM672_RS09475;Dbxref=GenBank:WP_311541433.1;Name=WP_311541433.1;Ontology_term=GO:0009103,GO:0061097;gbkey=CDS;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,regulation of protein tyrosine kinase activity|0061097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667264.1;locus_tag=RM672_RS09475;product=YveK family protein;protein_id=WP_311541433.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 102808 103515 . + . ID=gene-RM672_RS09480;Name=RM672_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09480;old_locus_tag=RM672_09475 NZ_JAVRJS010000006.1 Protein Homology CDS 102808 103515 . + 0 ID=cds-WP_136732161.1;Parent=gene-RM672_RS09480;Dbxref=GenBank:WP_136732161.1;Name=WP_136732161.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508553.1;locus_tag=RM672_RS09480;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_136732161.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 103512 104282 . + . ID=gene-RM672_RS09485;Name=RM672_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09485;old_locus_tag=RM672_09480 NZ_JAVRJS010000006.1 Protein Homology CDS 103512 104282 . + 0 ID=cds-WP_241955911.1;Parent=gene-RM672_RS09485;Dbxref=GenBank:WP_241955911.1;Name=WP_241955911.1;Ontology_term=GO:0004725,GO:0030145;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488244.1;locus_tag=RM672_RS09485;product=tyrosine-protein phosphatase;protein_id=WP_241955911.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 104306 106114 . + . ID=gene-RM672_RS09490;Name=RM672_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09490;old_locus_tag=RM672_09485 NZ_JAVRJS010000006.1 Protein Homology CDS 104306 106114 . + 0 ID=cds-WP_311541434.1;Parent=gene-RM672_RS09490;Dbxref=GenBank:WP_311541434.1;Name=WP_311541434.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723019.1;locus_tag=RM672_RS09490;product=polysaccharide biosynthesis protein;protein_id=WP_311541434.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 106125 107150 . + . ID=gene-RM672_RS09495;Name=RM672_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09495;old_locus_tag=RM672_09490 NZ_JAVRJS010000006.1 Protein Homology CDS 106125 107150 . + 0 ID=cds-WP_107388277.1;Parent=gene-RM672_RS09495;Dbxref=GenBank:WP_107388277.1;Name=WP_107388277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498718.1;locus_tag=RM672_RS09495;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_107388277.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 107165 108274 . + . ID=gene-RM672_RS09500;Name=RM672_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09500;old_locus_tag=RM672_09495 NZ_JAVRJS010000006.1 Protein Homology CDS 107165 108274 . + 0 ID=cds-WP_311541435.1;Parent=gene-RM672_RS09500;Dbxref=GenBank:WP_311541435.1;Name=WP_311541435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328573.1;locus_tag=RM672_RS09500;product=capsular polysaccharide biosynthesis protein CapF;protein_id=WP_311541435.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 108278 109405 . + . ID=gene-RM672_RS09505;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM672_RS09505;old_locus_tag=RM672_09500 NZ_JAVRJS010000006.1 Protein Homology CDS 108278 109405 . + 0 ID=cds-WP_311541436.1;Parent=gene-RM672_RS09505;Dbxref=GenBank:WP_311541436.1;Name=WP_311541436.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460630.1;locus_tag=RM672_RS09505;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_311541436.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 109405 110022 . + . ID=gene-RM672_RS09510;Name=RM672_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09510;old_locus_tag=RM672_09505 NZ_JAVRJS010000006.1 Protein Homology CDS 109405 110022 . + 0 ID=cds-WP_375712560.1;Parent=gene-RM672_RS09510;Dbxref=GenBank:WP_375712560.1;Name=WP_375712560.1;Ontology_term=GO:0046677,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002035417.1;locus_tag=RM672_RS09510;product=CatB-related O-acetyltransferase;protein_id=WP_375712560.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 110032 111141 . + . ID=gene-RM672_RS09515;Name=RM672_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09515;old_locus_tag=RM672_09510 NZ_JAVRJS010000006.1 Protein Homology CDS 110032 111141 . + 0 ID=cds-WP_311541437.1;Parent=gene-RM672_RS09515;Dbxref=GenBank:WP_311541437.1;Name=WP_311541437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460627.1;locus_tag=RM672_RS09515;product=glycosyltransferase;protein_id=WP_311541437.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 111163 112350 . + . ID=gene-RM672_RS09520;Name=RM672_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09520;old_locus_tag=RM672_09515 NZ_JAVRJS010000006.1 Protein Homology CDS 111163 112350 . + 0 ID=cds-WP_107363882.1;Parent=gene-RM672_RS09520;Dbxref=GenBank:WP_107363882.1;Name=WP_107363882.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836626.1;locus_tag=RM672_RS09520;product=O-antigen ligase family protein;protein_id=WP_107363882.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 112325 113527 . + . ID=gene-RM672_RS09525;Name=RM672_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09525;old_locus_tag=RM672_09520 NZ_JAVRJS010000006.1 Protein Homology CDS 112325 113527 . + 0 ID=cds-WP_311541438.1;Parent=gene-RM672_RS09525;Dbxref=GenBank:WP_311541438.1;Name=WP_311541438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003755271.1;locus_tag=RM672_RS09525;product=polysaccharide biosynthesis protein;protein_id=WP_311541438.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 113537 114748 . + . ID=gene-RM672_RS09530;Name=RM672_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09530;old_locus_tag=RM672_09525 NZ_JAVRJS010000006.1 Protein Homology CDS 113537 114748 . + 0 ID=cds-WP_311541439.1;Parent=gene-RM672_RS09530;Dbxref=GenBank:WP_311541439.1;Name=WP_311541439.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291009.1;locus_tag=RM672_RS09530;product=glycosyltransferase family 4 protein;protein_id=WP_311541439.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 114767 115324 . + . ID=gene-RM672_RS09535;Name=RM672_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09535;old_locus_tag=RM672_09530 NZ_JAVRJS010000006.1 Protein Homology CDS 114767 115324 . + 0 ID=cds-WP_107363900.1;Parent=gene-RM672_RS09535;Dbxref=GenBank:WP_107363900.1;Name=WP_107363900.1;Ontology_term=GO:0000271,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498726.1;locus_tag=RM672_RS09535;product=sugar transferase;protein_id=WP_107363900.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 115324 116181 . + . ID=gene-RM672_RS09540;Name=RM672_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09540;old_locus_tag=RM672_09535 NZ_JAVRJS010000006.1 Protein Homology CDS 115324 116181 . + 0 ID=cds-WP_105996979.1;Parent=gene-RM672_RS09540;Dbxref=GenBank:WP_105996979.1;Name=WP_105996979.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF016228.7;locus_tag=RM672_RS09540;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_105996979.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 116299 117450 . + . ID=gene-RM672_RS09545;Name=RM672_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09545;old_locus_tag=RM672_09540 NZ_JAVRJS010000006.1 Protein Homology CDS 116299 117450 . + 0 ID=cds-WP_311541440.1;Parent=gene-RM672_RS09545;Dbxref=GenBank:WP_311541440.1;Name=WP_311541440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455551.1;locus_tag=RM672_RS09545;product=FAD/NAD(P)-binding protein;protein_id=WP_311541440.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 117521 117904 . + . ID=gene-RM672_RS09550;Name=RM672_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09550;old_locus_tag=RM672_09545 NZ_JAVRJS010000006.1 Protein Homology CDS 117521 117904 . + 0 ID=cds-WP_107388503.1;Parent=gene-RM672_RS09550;Dbxref=GenBank:WP_107388503.1;Name=WP_107388503.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426132.1;locus_tag=RM672_RS09550;product=NUDIX hydrolase;protein_id=WP_107388503.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 117946 118347 . - . ID=gene-RM672_RS09555;Name=RM672_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09555;old_locus_tag=RM672_09550 NZ_JAVRJS010000006.1 Protein Homology CDS 117946 118347 . - 0 ID=cds-WP_311541441.1;Parent=gene-RM672_RS09555;Dbxref=GenBank:WP_311541441.1;Name=WP_311541441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=RM672_RS09555;product=hypothetical protein;protein_id=WP_311541441.1;transl_table=11 NZ_JAVRJS010000006.1 RefSeq gene 118964 127674 . + . ID=gene-RM672_RS09560;Name=RM672_RS09560;end_range=127674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09560;old_locus_tag=RM672_09555;partial=true NZ_JAVRJS010000006.1 Protein Homology CDS 118964 127674 . + 0 ID=cds-WP_311542502.1;Parent=gene-RM672_RS09560;Dbxref=GenBank:WP_311542502.1;Name=WP_311542502.1;end_range=127674,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039507.6;locus_tag=RM672_RS09560;partial=true;product=Rib/alpha-like domain-containing protein;protein_id=WP_311542502.1;transl_table=11 ##sequence-region NZ_JAVRJS010000007.1 1 113248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000007.1 RefSeq region 1 113248 . + . ID=NZ_JAVRJS010000007.1:1..113248;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000007.1 RefSeq gene 504 962 . - . ID=gene-RM672_RS09565;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=RM672_RS09565;old_locus_tag=RM672_09560 NZ_JAVRJS010000007.1 Protein Homology CDS 504 962 . - 0 ID=cds-WP_037575843.1;Parent=gene-RM672_RS09565;Dbxref=GenBank:WP_037575843.1;Name=WP_037575843.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169390.1;locus_tag=RM672_RS09565;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_037575843.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 1047 1997 . - . ID=gene-RM672_RS09570;Name=RM672_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09570;old_locus_tag=RM672_09565 NZ_JAVRJS010000007.1 Protein Homology CDS 1047 1997 . - 0 ID=cds-WP_037575840.1;Parent=gene-RM672_RS09570;Dbxref=GenBank:WP_037575840.1;Name=WP_037575840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=RM672_RS09570;product=phosphoglycerate dehydrogenase;protein_id=WP_037575840.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 2003 2461 . - . ID=gene-RM672_RS09575;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=RM672_RS09575;old_locus_tag=RM672_09570 NZ_JAVRJS010000007.1 Protein Homology CDS 2003 2461 . - 0 ID=cds-WP_037575837.1;Parent=gene-RM672_RS09575;Dbxref=GenBank:WP_037575837.1;Name=WP_037575837.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=RM672_RS09575;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_037575837.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 2542 3837 . + . ID=gene-RM672_RS09580;Name=RM672_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09580;old_locus_tag=RM672_09575 NZ_JAVRJS010000007.1 Protein Homology CDS 2542 3837 . + 0 ID=cds-WP_037575834.1;Parent=gene-RM672_RS09580;Dbxref=GenBank:WP_037575834.1;Name=WP_037575834.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=RM672_RS09580;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_037575834.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 4054 5148 . + . ID=gene-RM672_RS09585;Name=RM672_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09585;old_locus_tag=RM672_09580 NZ_JAVRJS010000007.1 Protein Homology CDS 4054 5148 . + 0 ID=cds-WP_037575825.1;Parent=gene-RM672_RS09585;Dbxref=GenBank:WP_037575825.1;Name=WP_037575825.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=RM672_RS09585;product=FUSC family protein;protein_id=WP_037575825.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 5227 6804 . - . ID=gene-RM672_RS09590;Name=RM672_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09590;old_locus_tag=RM672_09585 NZ_JAVRJS010000007.1 Protein Homology CDS 5227 6804 . - 0 ID=cds-WP_311541450.1;Parent=gene-RM672_RS09590;Dbxref=GenBank:WP_311541450.1;Name=WP_311541450.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510022.1;locus_tag=RM672_RS09590;product=FMN-binding glutamate synthase family protein;protein_id=WP_311541450.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 6968 8704 . - . ID=gene-RM672_RS09595;Name=RM672_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09595;old_locus_tag=RM672_09590 NZ_JAVRJS010000007.1 Protein Homology CDS 6968 8704 . - 0 ID=cds-WP_037575821.1;Parent=gene-RM672_RS09595;Dbxref=GenBank:WP_037575821.1;Name=WP_037575821.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=RM672_RS09595;product=ABC transporter ATP-binding protein;protein_id=WP_037575821.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 8838 9383 . - . ID=gene-RM672_RS09600;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=RM672_RS09600;old_locus_tag=RM672_09595 NZ_JAVRJS010000007.1 Protein Homology CDS 8838 9383 . - 0 ID=cds-WP_037575819.1;Parent=gene-RM672_RS09600;Dbxref=GenBank:WP_037575819.1;Name=WP_037575819.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495215.1;locus_tag=RM672_RS09600;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_037575819.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 9440 10492 . - . ID=gene-RM672_RS09605;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=RM672_RS09605;old_locus_tag=RM672_09600 NZ_JAVRJS010000007.1 Protein Homology CDS 9440 10492 . - 0 ID=cds-WP_233655147.1;Parent=gene-RM672_RS09605;Dbxref=GenBank:WP_233655147.1;Name=WP_233655147.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900686.1;locus_tag=RM672_RS09605;product=A/G-specific adenine glycosylase;protein_id=WP_233655147.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 10581 11558 . + . ID=gene-RM672_RS09610;Name=RM672_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09610;old_locus_tag=RM672_09605 NZ_JAVRJS010000007.1 Protein Homology CDS 10581 11558 . + 0 ID=cds-WP_037575814.1;Parent=gene-RM672_RS09610;Dbxref=GenBank:WP_037575814.1;Name=WP_037575814.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=RM672_RS09610;product=metal-dependent hydrolase;protein_id=WP_037575814.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 12023 12838 . - . ID=gene-RM672_RS09615;Name=RM672_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09615;old_locus_tag=RM672_09610 NZ_JAVRJS010000007.1 Protein Homology CDS 12023 12838 . - 0 ID=cds-WP_105967555.1;Parent=gene-RM672_RS09615;Dbxref=GenBank:WP_105967555.1;Name=WP_105967555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=RM672_RS09615;product=teichoic acid translocation permease;protein_id=WP_105967555.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 12847 14373 . - . ID=gene-RM672_RS09620;Name=RM672_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09620;old_locus_tag=RM672_09615 NZ_JAVRJS010000007.1 Protein Homology CDS 12847 14373 . - 0 ID=cds-WP_105965736.1;Parent=gene-RM672_RS09620;Dbxref=GenBank:WP_105965736.1;Name=WP_105965736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804867.1;locus_tag=RM672_RS09620;product=ABC transporter ATP-binding protein;protein_id=WP_105965736.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 14389 14700 . - . ID=gene-RM672_RS09625;Name=RM672_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09625;old_locus_tag=RM672_09620 NZ_JAVRJS010000007.1 Protein Homology CDS 14389 14700 . - 0 ID=cds-WP_105965737.1;Parent=gene-RM672_RS09625;Dbxref=GenBank:WP_105965737.1;Name=WP_105965737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435810.1;locus_tag=RM672_RS09625;product=YfhH family protein;protein_id=WP_105965737.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 14690 15496 . - . ID=gene-RM672_RS09630;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=RM672_RS09630;old_locus_tag=RM672_09625 NZ_JAVRJS010000007.1 Protein Homology CDS 14690 15496 . - 0 ID=cds-WP_105965738.1;Parent=gene-RM672_RS09630;Dbxref=GenBank:WP_105965738.1;Name=WP_105965738.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175220.1;locus_tag=RM672_RS09630;product=recombination regulator RecX;protein_id=WP_105965738.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 15582 16388 . - . ID=gene-RM672_RS09635;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=RM672_RS09635;old_locus_tag=RM672_09630 NZ_JAVRJS010000007.1 Protein Homology CDS 15582 16388 . - 0 ID=cds-WP_105965739.1;Parent=gene-RM672_RS09635;Dbxref=GenBank:WP_105965739.1;Name=WP_105965739.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452353.1;locus_tag=RM672_RS09635;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_105965739.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 16553 18298 . + . ID=gene-RM672_RS09640;Name=RM672_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09640;old_locus_tag=RM672_09635 NZ_JAVRJS010000007.1 Protein Homology CDS 16553 18298 . + 0 ID=cds-WP_105965740.1;Parent=gene-RM672_RS09640;Dbxref=GenBank:WP_105965740.1;Name=WP_105965740.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=RM672_RS09640;product=pyruvate oxidase;protein_id=WP_105965740.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 18523 19041 . - . ID=gene-RM672_RS09645;Name=RM672_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09645;old_locus_tag=RM672_09640 NZ_JAVRJS010000007.1 Protein Homology CDS 18523 19041 . - 0 ID=cds-WP_037575802.1;Parent=gene-RM672_RS09645;Dbxref=GenBank:WP_037575802.1;Name=WP_037575802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302786.1;locus_tag=RM672_RS09645;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_037575802.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 19112 19273 . - . ID=gene-RM672_RS09650;Name=RM672_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09650;old_locus_tag=RM672_09645 NZ_JAVRJS010000007.1 Protein Homology CDS 19112 19273 . - 0 ID=cds-WP_165806293.1;Parent=gene-RM672_RS09650;Dbxref=GenBank:WP_165806293.1;Name=WP_165806293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=RM672_RS09650;product=SE1561 family protein;protein_id=WP_165806293.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 19383 20519 . + . ID=gene-RM672_RS09655;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=RM672_RS09655;old_locus_tag=RM672_09650 NZ_JAVRJS010000007.1 Protein Homology CDS 19383 20519 . + 0 ID=cds-WP_037575800.1;Parent=gene-RM672_RS09655;Dbxref=GenBank:WP_037575800.1;Name=WP_037575800.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425498.1;locus_tag=RM672_RS09655;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_037575800.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 20587 21114 . - . ID=gene-RM672_RS09660;Name=RM672_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09660;old_locus_tag=RM672_09655 NZ_JAVRJS010000007.1 Protein Homology CDS 20587 21114 . - 0 ID=cds-WP_037575799.1;Parent=gene-RM672_RS09660;Dbxref=GenBank:WP_037575799.1;Name=WP_037575799.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384028.1;locus_tag=RM672_RS09660;product=acyl-CoA thioesterase;protein_id=WP_037575799.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 21133 22362 . - . ID=gene-RM672_RS09665;Name=RM672_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09665;old_locus_tag=RM672_09660 NZ_JAVRJS010000007.1 Protein Homology CDS 21133 22362 . - 0 ID=cds-WP_232160171.1;Parent=gene-RM672_RS09665;Dbxref=GenBank:WP_232160171.1;Name=WP_232160171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469621.1;locus_tag=RM672_RS09665;product=aminopeptidase;protein_id=WP_232160171.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 22393 22602 . - . ID=gene-RM672_RS09670;Name=RM672_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09670;old_locus_tag=RM672_09665 NZ_JAVRJS010000007.1 Protein Homology CDS 22393 22602 . - 0 ID=cds-WP_037575795.1;Parent=gene-RM672_RS09670;Dbxref=GenBank:WP_037575795.1;Name=WP_037575795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169369.1;locus_tag=RM672_RS09670;product=DUF1128 domain-containing protein;protein_id=WP_037575795.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 22735 23193 . + . ID=gene-RM672_RS09675;Name=RM672_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09675;old_locus_tag=RM672_09670 NZ_JAVRJS010000007.1 Protein Homology CDS 22735 23193 . + 0 ID=cds-WP_037575792.1;Parent=gene-RM672_RS09675;Dbxref=GenBank:WP_037575792.1;Name=WP_037575792.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=RM672_RS09675;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_037575792.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 23198 23473 . + . ID=gene-RM672_RS09680;Name=RM672_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09680;old_locus_tag=RM672_09675 NZ_JAVRJS010000007.1 Protein Homology CDS 23198 23473 . + 0 ID=cds-WP_037575789.1;Parent=gene-RM672_RS09680;Dbxref=GenBank:WP_037575789.1;Name=WP_037575789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500587.1;locus_tag=RM672_RS09680;product=YtxH domain-containing protein;protein_id=WP_037575789.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 23599 24867 . + . ID=gene-RM672_RS09685;Name=RM672_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09685;old_locus_tag=RM672_09680 NZ_JAVRJS010000007.1 Protein Homology CDS 23599 24867 . + 0 ID=cds-WP_105963441.1;Parent=gene-RM672_RS09685;Dbxref=GenBank:WP_105963441.1;Name=WP_105963441.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452290.1;locus_tag=RM672_RS09685;product=YihY/virulence factor BrkB family protein;protein_id=WP_105963441.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 24910 25482 . + . ID=gene-RM672_RS09690;Name=RM672_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09690;old_locus_tag=RM672_09685 NZ_JAVRJS010000007.1 Protein Homology CDS 24910 25482 . + 0 ID=cds-WP_037575784.1;Parent=gene-RM672_RS09690;Dbxref=GenBank:WP_037575784.1;Name=WP_037575784.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384034.1;locus_tag=RM672_RS09690;product=beta-class carbonic anhydrase;protein_id=WP_037575784.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 25686 26315 . - . ID=gene-RM672_RS09695;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=RM672_RS09695;old_locus_tag=RM672_09690 NZ_JAVRJS010000007.1 Protein Homology CDS 25686 26315 . - 0 ID=cds-WP_037575783.1;Parent=gene-RM672_RS09695;Dbxref=GenBank:WP_037575783.1;Name=WP_037575783.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=RM672_RS09695;product=response regulator transcription factor VraR;protein_id=WP_037575783.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 26305 27348 . - . ID=gene-RM672_RS09700;Name=RM672_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09700;old_locus_tag=RM672_09695 NZ_JAVRJS010000007.1 Protein Homology CDS 26305 27348 . - 0 ID=cds-WP_037575781.1;Parent=gene-RM672_RS09700;Dbxref=GenBank:WP_037575781.1;Name=WP_037575781.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=RM672_RS09700;product=sensor histidine kinase;protein_id=WP_037575781.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 27345 28046 . - . ID=gene-RM672_RS09705;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=RM672_RS09705;old_locus_tag=RM672_09700 NZ_JAVRJS010000007.1 Protein Homology CDS 27345 28046 . - 0 ID=cds-WP_037575779.1;Parent=gene-RM672_RS09705;Dbxref=GenBank:WP_037575779.1;Name=WP_037575779.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=RM672_RS09705;product=cell wall-active antibiotics response protein VraT;protein_id=WP_037575779.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 28059 28448 . - . ID=gene-RM672_RS09710;Name=RM672_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09710;old_locus_tag=RM672_09705 NZ_JAVRJS010000007.1 GeneMarkS-2+ CDS 28059 28448 . - 0 ID=cds-WP_037575778.1;Parent=gene-RM672_RS09710;Dbxref=GenBank:WP_037575778.1;Name=WP_037575778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09710;product=hypothetical protein;protein_id=WP_037575778.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 28544 29302 . - . ID=gene-RM672_RS09715;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=RM672_RS09715;old_locus_tag=RM672_09710 NZ_JAVRJS010000007.1 Protein Homology CDS 28544 29302 . - 0 ID=cds-WP_037575776.1;Parent=gene-RM672_RS09715;Dbxref=GenBank:WP_037575776.1;Name=WP_037575776.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425510.1;locus_tag=RM672_RS09715;product=type I methionyl aminopeptidase;protein_id=WP_037575776.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 29634 30644 . + . ID=gene-RM672_RS09720;Name=RM672_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09720;old_locus_tag=RM672_09715 NZ_JAVRJS010000007.1 Protein Homology CDS 29634 30644 . + 0 ID=cds-WP_105965742.1;Parent=gene-RM672_RS09720;Dbxref=GenBank:WP_105965742.1;Name=WP_105965742.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445470.1;locus_tag=RM672_RS09720;product=FUSC family protein;protein_id=WP_105965742.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 30682 31410 . - . ID=gene-RM672_RS09725;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=RM672_RS09725;old_locus_tag=RM672_09720 NZ_JAVRJS010000007.1 Protein Homology CDS 30682 31410 . - 0 ID=cds-WP_119505357.1;Parent=gene-RM672_RS09725;Dbxref=GenBank:WP_119505357.1;Name=WP_119505357.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461344.1;locus_tag=RM672_RS09725;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_119505357.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 31411 32721 . - . ID=gene-RM672_RS09730;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=RM672_RS09730;old_locus_tag=RM672_09725 NZ_JAVRJS010000007.1 Protein Homology CDS 31411 32721 . - 0 ID=cds-WP_037575772.1;Parent=gene-RM672_RS09730;Dbxref=GenBank:WP_037575772.1;Name=WP_037575772.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425517.1;locus_tag=RM672_RS09730;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_037575772.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 32871 33374 . + . ID=gene-RM672_RS09735;Name=RM672_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09735;old_locus_tag=RM672_09730 NZ_JAVRJS010000007.1 Protein Homology CDS 32871 33374 . + 0 ID=cds-WP_037575770.1;Parent=gene-RM672_RS09735;Dbxref=GenBank:WP_037575770.1;Name=WP_037575770.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302773.1;locus_tag=RM672_RS09735;product=ferritin;protein_id=WP_037575770.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 33471 34031 . + . ID=gene-RM672_RS09740;Name=RM672_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09740;old_locus_tag=RM672_09735 NZ_JAVRJS010000007.1 Protein Homology CDS 33471 34031 . + 0 ID=cds-WP_037575768.1;Parent=gene-RM672_RS09740;Dbxref=GenBank:WP_037575768.1;Name=WP_037575768.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=RM672_RS09740;product=3'-5' exonuclease;protein_id=WP_037575768.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 34026 35096 . - . ID=gene-RM672_RS09745;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=RM672_RS09745;old_locus_tag=RM672_09740 NZ_JAVRJS010000007.1 Protein Homology CDS 34026 35096 . - 0 ID=cds-WP_037575767.1;Parent=gene-RM672_RS09745;Dbxref=GenBank:WP_037575767.1;Name=WP_037575767.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=RM672_RS09745;product=DNA polymerase IV;protein_id=WP_037575767.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 35343 35873 . - . ID=gene-RM672_RS09750;Name=RM672_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09750;old_locus_tag=RM672_09745 NZ_JAVRJS010000007.1 Protein Homology CDS 35343 35873 . - 0 ID=cds-WP_233655139.1;Parent=gene-RM672_RS09750;Dbxref=GenBank:WP_233655139.1;Name=WP_233655139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023096.7;locus_tag=RM672_RS09750;product=DUF3267 domain-containing protein;protein_id=WP_233655139.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 35947 37275 . - . ID=gene-RM672_RS09755;Name=RM672_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09755;old_locus_tag=RM672_09750 NZ_JAVRJS010000007.1 Protein Homology CDS 35947 37275 . - 0 ID=cds-WP_105996932.1;Parent=gene-RM672_RS09755;Dbxref=GenBank:WP_105996932.1;Name=WP_105996932.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.7;locus_tag=RM672_RS09755;product=carboxylesterase family protein;protein_id=WP_105996932.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 37290 38654 . - . ID=gene-RM672_RS09760;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=RM672_RS09760;old_locus_tag=RM672_09755 NZ_JAVRJS010000007.1 Protein Homology CDS 37290 38654 . - 0 ID=cds-WP_103159026.1;Parent=gene-RM672_RS09760;Dbxref=GenBank:WP_103159026.1;Name=WP_103159026.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363302.1;locus_tag=RM672_RS09760;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_103159026.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 38745 39677 . - . ID=gene-RM672_RS09765;Name=RM672_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09765;old_locus_tag=RM672_09760 NZ_JAVRJS010000007.1 Protein Homology CDS 38745 39677 . - 0 ID=cds-WP_103159027.1;Parent=gene-RM672_RS09765;Dbxref=GenBank:WP_103159027.1;Name=WP_103159027.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=RM672_RS09765;product=diacylglycerol kinase;protein_id=WP_103159027.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 39968 41395 . - . ID=gene-RM672_RS09770;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=RM672_RS09770;old_locus_tag=RM672_09765 NZ_JAVRJS010000007.1 Protein Homology CDS 39968 41395 . - 0 ID=cds-WP_037575761.1;Parent=gene-RM672_RS09770;Dbxref=GenBank:WP_037575761.1;Name=WP_037575761.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=RM672_RS09770;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_037575761.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 41409 42869 . - . ID=gene-RM672_RS09775;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=RM672_RS09775;old_locus_tag=RM672_09770 NZ_JAVRJS010000007.1 Protein Homology CDS 41409 42869 . - 0 ID=cds-WP_037575760.1;Parent=gene-RM672_RS09775;Dbxref=GenBank:WP_037575760.1;Name=WP_037575760.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=RM672_RS09775;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_037575760.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 42871 43173 . - . ID=gene-RM672_RS09780;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=RM672_RS09780;old_locus_tag=RM672_09775 NZ_JAVRJS010000007.1 Protein Homology CDS 42871 43173 . - 0 ID=cds-WP_037575759.1;Parent=gene-RM672_RS09780;Dbxref=GenBank:WP_037575759.1;Name=WP_037575759.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=RM672_RS09780;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_037575759.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 43750 45294 . + . ID=gene-RM672_RS09785;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=RM672_RS09785;old_locus_tag=RM672_09780 NZ_JAVRJS010000007.1 Protein Homology CDS 43750 45294 . + 0 ID=cds-WP_037575756.1;Parent=gene-RM672_RS09785;Dbxref=GenBank:WP_037575756.1;Name=WP_037575756.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509885.1;locus_tag=RM672_RS09785;product=sodium/proline symporter PutP;protein_id=WP_037575756.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 45394 46587 . - . ID=gene-RM672_RS09790;Name=RM672_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09790;old_locus_tag=RM672_09785 NZ_JAVRJS010000007.1 Protein Homology CDS 45394 46587 . - 0 ID=cds-WP_037575752.1;Parent=gene-RM672_RS09790;Dbxref=GenBank:WP_037575752.1;Name=WP_037575752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499947.1;locus_tag=RM672_RS09790;product=CamS family sex pheromone protein;protein_id=WP_037575752.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 46599 48602 . - . ID=gene-RM672_RS09795;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=RM672_RS09795;old_locus_tag=RM672_09790 NZ_JAVRJS010000007.1 Protein Homology CDS 46599 48602 . - 0 ID=cds-WP_103159496.1;Parent=gene-RM672_RS09795;Dbxref=GenBank:WP_103159496.1;Name=WP_103159496.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477944.1;locus_tag=RM672_RS09795;product=NAD-dependent DNA ligase LigA;protein_id=WP_103159496.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 48603 50792 . - . ID=gene-RM672_RS09800;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=RM672_RS09800;old_locus_tag=RM672_09795 NZ_JAVRJS010000007.1 Protein Homology CDS 48603 50792 . - 0 ID=cds-WP_119505360.1;Parent=gene-RM672_RS09800;Dbxref=GenBank:WP_119505360.1;Name=WP_119505360.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=RM672_RS09800;product=DNA helicase PcrA;protein_id=WP_119505360.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 50792 51481 . - . ID=gene-RM672_RS09805;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=RM672_RS09805;old_locus_tag=RM672_09800 NZ_JAVRJS010000007.1 Protein Homology CDS 50792 51481 . - 0 ID=cds-WP_037575743.1;Parent=gene-RM672_RS09805;Dbxref=GenBank:WP_037575743.1;Name=WP_037575743.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=RM672_RS09805;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_037575743.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 51641 51943 . - . ID=gene-RM672_RS09810;Name=RM672_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09810;old_locus_tag=RM672_09805 NZ_JAVRJS010000007.1 Protein Homology CDS 51641 51943 . - 0 ID=cds-WP_037575741.1;Parent=gene-RM672_RS09810;Dbxref=GenBank:WP_037575741.1;Name=WP_037575741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500616.1;locus_tag=RM672_RS09810;product=YerC/YecD family TrpR-related protein;protein_id=WP_037575741.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 52012 53307 . - . ID=gene-RM672_RS09815;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=RM672_RS09815;old_locus_tag=RM672_09810 NZ_JAVRJS010000007.1 Protein Homology CDS 52012 53307 . - 0 ID=cds-WP_103159498.1;Parent=gene-RM672_RS09815;Dbxref=GenBank:WP_103159498.1;Name=WP_103159498.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500617.1;locus_tag=RM672_RS09815;product=adenylosuccinate lyase;protein_id=WP_103159498.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 53572 53751 . - . ID=gene-RM672_RS09820;Name=RM672_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09820;old_locus_tag=RM672_09815 NZ_JAVRJS010000007.1 Protein Homology CDS 53572 53751 . - 0 ID=cds-WP_037575736.1;Parent=gene-RM672_RS09820;Dbxref=GenBank:WP_037575736.1;Name=WP_037575736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384058.1;locus_tag=RM672_RS09820;product=NETI motif-containing protein;protein_id=WP_037575736.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 53741 54310 . - . ID=gene-RM672_RS09825;Name=RM672_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09825;old_locus_tag=RM672_09820 NZ_JAVRJS010000007.1 Protein Homology CDS 53741 54310 . - 0 ID=cds-WP_037575734.1;Parent=gene-RM672_RS09825;Dbxref=GenBank:WP_037575734.1;Name=WP_037575734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=RM672_RS09825;product=DUF2179 domain-containing protein;protein_id=WP_037575734.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 54379 55200 . - . ID=gene-RM672_RS09830;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=RM672_RS09830;old_locus_tag=RM672_09825 NZ_JAVRJS010000007.1 Protein Homology CDS 54379 55200 . - 0 ID=cds-WP_107366307.1;Parent=gene-RM672_RS09830;Dbxref=GenBank:WP_107366307.1;Name=WP_107366307.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275346.1;locus_tag=RM672_RS09830;product=NAD(+) synthase;protein_id=WP_107366307.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 55193 56662 . - . ID=gene-RM672_RS09835;Name=RM672_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09835;old_locus_tag=RM672_09830 NZ_JAVRJS010000007.1 Protein Homology CDS 55193 56662 . - 0 ID=cds-WP_037575729.1;Parent=gene-RM672_RS09835;Dbxref=GenBank:WP_037575729.1;Name=WP_037575729.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=RM672_RS09835;product=nicotinate phosphoribosyltransferase;protein_id=WP_037575729.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 56823 57893 . + . ID=gene-RM672_RS09840;Name=RM672_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09840;old_locus_tag=RM672_09835 NZ_JAVRJS010000007.1 Protein Homology CDS 56823 57893 . + 0 ID=cds-WP_103158759.1;Parent=gene-RM672_RS09840;Dbxref=GenBank:WP_103158759.1;Name=WP_103158759.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=RM672_RS09840;product=nitric oxide synthase oxygenase;protein_id=WP_103158759.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 57937 58728 . + . ID=gene-RM672_RS09845;Name=RM672_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09845;old_locus_tag=RM672_09840 NZ_JAVRJS010000007.1 Protein Homology CDS 57937 58728 . + 0 ID=cds-WP_037575723.1;Parent=gene-RM672_RS09845;Dbxref=GenBank:WP_037575723.1;Name=WP_037575723.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169333.1;locus_tag=RM672_RS09845;product=prephenate dehydratase;protein_id=WP_037575723.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 58966 60069 . - . ID=gene-RM672_RS09850;Name=RM672_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09850;old_locus_tag=RM672_09845 NZ_JAVRJS010000007.1 Protein Homology CDS 58966 60069 . - 0 ID=cds-WP_103158758.1;Parent=gene-RM672_RS09850;Dbxref=GenBank:WP_103158758.1;Name=WP_103158758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425542.1;locus_tag=RM672_RS09850;product=glycosyl hydrolase family 28-related protein;protein_id=WP_103158758.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 60152 60703 . + . ID=gene-RM672_RS09855;Name=RM672_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09855;old_locus_tag=RM672_09850 NZ_JAVRJS010000007.1 Protein Homology CDS 60152 60703 . + 0 ID=cds-WP_037575718.1;Parent=gene-RM672_RS09855;Dbxref=GenBank:WP_037575718.1;Name=WP_037575718.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=RM672_RS09855;product=cysteine hydrolase family protein;protein_id=WP_037575718.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 60766 61689 . + . ID=gene-RM672_RS09860;Name=RM672_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09860;old_locus_tag=RM672_09855 NZ_JAVRJS010000007.1 Protein Homology CDS 60766 61689 . + 0 ID=cds-WP_037575715.1;Parent=gene-RM672_RS09860;Dbxref=GenBank:WP_037575715.1;Name=WP_037575715.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169330.1;locus_tag=RM672_RS09860;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_037575715.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 61709 61996 . + . ID=gene-RM672_RS09865;Name=RM672_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09865;old_locus_tag=RM672_09860 NZ_JAVRJS010000007.1 Protein Homology CDS 61709 61996 . + 0 ID=cds-WP_037575714.1;Parent=gene-RM672_RS09865;Dbxref=GenBank:WP_037575714.1;Name=WP_037575714.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384068.1;locus_tag=RM672_RS09865;product=GNAT family N-acetyltransferase;protein_id=WP_037575714.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 62196 63578 . + . ID=gene-RM672_RS09870;Name=RM672_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09870;old_locus_tag=RM672_09865 NZ_JAVRJS010000007.1 Protein Homology CDS 62196 63578 . + 0 ID=cds-WP_037575712.1;Parent=gene-RM672_RS09870;Dbxref=GenBank:WP_037575712.1;Name=WP_037575712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900735.1;locus_tag=RM672_RS09870;product=aldehyde dehydrogenase;protein_id=WP_037575712.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 63874 64914 . - . ID=gene-RM672_RS09875;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=RM672_RS09875;old_locus_tag=RM672_09870 NZ_JAVRJS010000007.1 Protein Homology CDS 63874 64914 . - 0 ID=cds-WP_037575709.1;Parent=gene-RM672_RS09875;Dbxref=GenBank:WP_037575709.1;Name=WP_037575709.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302748.1;locus_tag=RM672_RS09875;product=6-phosphogluconolactonase;protein_id=WP_037575709.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 64987 65556 . - . ID=gene-RM672_RS09880;Name=RM672_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09880;old_locus_tag=RM672_09875 NZ_JAVRJS010000007.1 GeneMarkS-2+ CDS 64987 65556 . - 0 ID=cds-WP_037575707.1;Parent=gene-RM672_RS09880;Dbxref=GenBank:WP_037575707.1;Name=WP_037575707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS09880;product=hypothetical protein;protein_id=WP_037575707.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 65686 65859 . - . ID=gene-RM672_RS09885;Name=RM672_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09885;old_locus_tag=RM672_09880 NZ_JAVRJS010000007.1 Protein Homology CDS 65686 65859 . - 0 ID=cds-WP_165806299.1;Parent=gene-RM672_RS09885;Dbxref=GenBank:WP_165806299.1;Name=WP_165806299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461390.1;locus_tag=RM672_RS09885;product=hypothetical protein;protein_id=WP_165806299.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 66031 66414 . + . ID=gene-RM672_RS09890;Name=RM672_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09890;old_locus_tag=RM672_09885 NZ_JAVRJS010000007.1 Protein Homology CDS 66031 66414 . + 0 ID=cds-WP_037575705.1;Parent=gene-RM672_RS09890;Dbxref=GenBank:WP_037575705.1;Name=WP_037575705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=RM672_RS09890;product=hypothetical protein;protein_id=WP_037575705.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 66692 67732 . + . ID=gene-RM672_RS09895;Name=RM672_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09895;old_locus_tag=RM672_09890 NZ_JAVRJS010000007.1 Protein Homology CDS 66692 67732 . + 0 ID=cds-WP_105963432.1;Parent=gene-RM672_RS09895;Dbxref=GenBank:WP_105963432.1;Name=WP_105963432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188079.1;locus_tag=RM672_RS09895;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_105963432.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 67783 68625 . - . ID=gene-RM672_RS09900;Name=RM672_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09900;old_locus_tag=RM672_09895 NZ_JAVRJS010000007.1 Protein Homology CDS 67783 68625 . - 0 ID=cds-WP_037575702.1;Parent=gene-RM672_RS09900;Dbxref=GenBank:WP_037575702.1;Name=WP_037575702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024743.7;locus_tag=RM672_RS09900;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_037575702.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 68622 69185 . - . ID=gene-RM672_RS09905;Name=RM672_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09905;old_locus_tag=RM672_09900 NZ_JAVRJS010000007.1 Protein Homology CDS 68622 69185 . - 0 ID=cds-WP_037575700.1;Parent=gene-RM672_RS09905;Dbxref=GenBank:WP_037575700.1;Name=WP_037575700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=RM672_RS09905;product=HAAS signaling domain-containing protein;protein_id=WP_037575700.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 69371 69925 . + . ID=gene-RM672_RS09910;Name=RM672_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09910;old_locus_tag=RM672_09905 NZ_JAVRJS010000007.1 Protein Homology CDS 69371 69925 . + 0 ID=cds-WP_037575698.1;Parent=gene-RM672_RS09910;Dbxref=GenBank:WP_037575698.1;Name=WP_037575698.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170608.1;locus_tag=RM672_RS09910;product=thioredoxin family protein;protein_id=WP_037575698.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 70123 70536 . - . ID=gene-RM672_RS09915;Name=RM672_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09915;old_locus_tag=RM672_09910 NZ_JAVRJS010000007.1 Protein Homology CDS 70123 70536 . - 0 ID=cds-WP_037575696.1;Parent=gene-RM672_RS09915;Dbxref=GenBank:WP_037575696.1;Name=WP_037575696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=RM672_RS09915;product=DUF2188 domain-containing protein;protein_id=WP_037575696.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 70577 71938 . - . ID=gene-RM672_RS09920;Name=RM672_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09920;old_locus_tag=RM672_09915 NZ_JAVRJS010000007.1 Protein Homology CDS 70577 71938 . - 0 ID=cds-WP_103158755.1;Parent=gene-RM672_RS09920;Dbxref=GenBank:WP_103158755.1;Name=WP_103158755.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=RM672_RS09920;product=gluconate:H+ symporter;protein_id=WP_103158755.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 71953 73485 . - . ID=gene-RM672_RS09925;Name=RM672_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09925;old_locus_tag=RM672_09920 NZ_JAVRJS010000007.1 Protein Homology CDS 71953 73485 . - 0 ID=cds-WP_037575694.1;Parent=gene-RM672_RS09925;Dbxref=GenBank:WP_037575694.1;Name=WP_037575694.1;Ontology_term=GO:0016310,GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=phosphorylation|0016310||IEA,obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425556.1;locus_tag=RM672_RS09925;product=gluconokinase;protein_id=WP_037575694.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 73508 74182 . - . ID=gene-RM672_RS09930;Name=RM672_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09930;old_locus_tag=RM672_09925 NZ_JAVRJS010000007.1 Protein Homology CDS 73508 74182 . - 0 ID=cds-WP_105965754.1;Parent=gene-RM672_RS09930;Dbxref=GenBank:WP_105965754.1;Name=WP_105965754.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=RM672_RS09930;product=GntR family transcriptional regulator;protein_id=WP_105965754.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 74363 75091 . - . ID=gene-RM672_RS09935;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=RM672_RS09935;old_locus_tag=RM672_09930 NZ_JAVRJS010000007.1 Protein Homology CDS 74363 75091 . - 0 ID=cds-WP_037575691.1;Parent=gene-RM672_RS09935;Dbxref=GenBank:WP_037575691.1;Name=WP_037575691.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425558.1;locus_tag=RM672_RS09935;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_037575691.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 75091 75963 . - . ID=gene-RM672_RS09940;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=RM672_RS09940;old_locus_tag=RM672_09935 NZ_JAVRJS010000007.1 Protein Homology CDS 75091 75963 . - 0 ID=cds-WP_037575689.1;Parent=gene-RM672_RS09940;Dbxref=GenBank:WP_037575689.1;Name=WP_037575689.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466134.1;locus_tag=RM672_RS09940;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_037575689.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 76659 76955 . - . ID=gene-RM672_RS09945;Name=RM672_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09945;old_locus_tag=RM672_09940 NZ_JAVRJS010000007.1 Protein Homology CDS 76659 76955 . - 0 ID=cds-WP_258026739.1;Parent=gene-RM672_RS09945;Dbxref=GenBank:WP_258026739.1;Name=WP_258026739.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469536.1;locus_tag=RM672_RS09945;product=GntR family transcriptional regulator;protein_id=WP_258026739.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 77256 77432 . - . ID=gene-RM672_RS09950;Name=RM672_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09950;old_locus_tag=RM672_09945 NZ_JAVRJS010000007.1 Protein Homology CDS 77256 77432 . - 0 ID=cds-WP_037575851.1;Parent=gene-RM672_RS09950;Dbxref=GenBank:WP_037575851.1;Name=WP_037575851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385021.1;locus_tag=RM672_RS09950;product=SE1626 family protein;protein_id=WP_037575851.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 77592 78881 . + . ID=gene-RM672_RS09955;Name=RM672_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09955;old_locus_tag=RM672_09950 NZ_JAVRJS010000007.1 Protein Homology CDS 77592 78881 . + 0 ID=cds-WP_311541448.1;Parent=gene-RM672_RS09955;Dbxref=GenBank:WP_311541448.1;Name=WP_311541448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068529.1;locus_tag=RM672_RS09955;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311541448.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 78965 79780 . + . ID=gene-RM672_RS09960;Name=RM672_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09960;old_locus_tag=RM672_09955 NZ_JAVRJS010000007.1 Protein Homology CDS 78965 79780 . + 0 ID=cds-WP_105996941.1;Parent=gene-RM672_RS09960;Dbxref=GenBank:WP_105996941.1;Name=WP_105996941.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=RM672_RS09960;product=SPL family radical SAM protein;protein_id=WP_105996941.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 79795 80319 . + . ID=gene-RM672_RS09965;Name=RM672_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09965;old_locus_tag=RM672_09960 NZ_JAVRJS010000007.1 Protein Homology CDS 79795 80319 . + 0 ID=cds-WP_103158752.1;Parent=gene-RM672_RS09965;Dbxref=GenBank:WP_103158752.1;Name=WP_103158752.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425564.1;locus_tag=RM672_RS09965;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_103158752.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 80449 80892 . - . ID=gene-RM672_RS09970;Name=RM672_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09970;old_locus_tag=RM672_09965 NZ_JAVRJS010000007.1 Protein Homology CDS 80449 80892 . - 0 ID=cds-WP_306823253.1;Parent=gene-RM672_RS09970;Dbxref=GenBank:WP_306823253.1;Name=WP_306823253.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468210.1;locus_tag=RM672_RS09970;product=ASCH domain-containing protein;protein_id=WP_306823253.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 81328 81834 . + . ID=gene-RM672_RS09975;Name=RM672_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09975;old_locus_tag=RM672_09970 NZ_JAVRJS010000007.1 Protein Homology CDS 81328 81834 . + 0 ID=cds-WP_311541447.1;Parent=gene-RM672_RS09975;Dbxref=GenBank:WP_311541447.1;Name=WP_311541447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722219.1;locus_tag=RM672_RS09975;product=YagU family protein;protein_id=WP_311541447.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 82107 83726 . - . ID=gene-RM672_RS09980;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=RM672_RS09980;old_locus_tag=RM672_09975 NZ_JAVRJS010000007.1 Protein Homology CDS 82107 83726 . - 0 ID=cds-WP_107371989.1;Parent=gene-RM672_RS09980;Dbxref=GenBank:WP_107371989.1;Name=WP_107371989.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=RM672_RS09980;product=chaperonin GroEL;protein_id=WP_107371989.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 83796 84083 . - . ID=gene-RM672_RS09985;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=RM672_RS09985;old_locus_tag=RM672_09980 NZ_JAVRJS010000007.1 Protein Homology CDS 83796 84083 . - 0 ID=cds-WP_107371988.1;Parent=gene-RM672_RS09985;Dbxref=GenBank:WP_107371988.1;Name=WP_107371988.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=RM672_RS09985;product=co-chaperone GroES;protein_id=WP_107371988.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 84253 85005 . + . ID=gene-RM672_RS09990;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=RM672_RS09990;old_locus_tag=RM672_09985 NZ_JAVRJS010000007.1 Protein Homology CDS 84253 85005 . + 0 ID=cds-WP_107364119.1;Parent=gene-RM672_RS09990;Dbxref=GenBank:WP_107364119.1;Name=WP_107364119.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425570.1;locus_tag=RM672_RS09990;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_107364119.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 85083 86273 . - . ID=gene-RM672_RS09995;Name=RM672_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS09995;old_locus_tag=RM672_09990 NZ_JAVRJS010000007.1 Protein Homology CDS 85083 86273 . - 0 ID=cds-WP_119505366.1;Parent=gene-RM672_RS09995;Dbxref=GenBank:WP_119505366.1;Name=WP_119505366.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039170.1;locus_tag=RM672_RS09995;product=SdrH family protein;protein_id=WP_119505366.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 86453 87250 . + . ID=gene-RM672_RS10000;Name=RM672_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10000;old_locus_tag=RM672_09995 NZ_JAVRJS010000007.1 Protein Homology CDS 86453 87250 . + 0 ID=cds-WP_311541446.1;Parent=gene-RM672_RS10000;Dbxref=GenBank:WP_311541446.1;Name=WP_311541446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=RM672_RS10000;product=carbon-nitrogen family hydrolase;protein_id=WP_311541446.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 87898 88461 . + . ID=gene-RM672_RS10005;Name=RM672_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10005;old_locus_tag=RM672_10000 NZ_JAVRJS010000007.1 Protein Homology CDS 87898 88461 . + 0 ID=cds-WP_037575678.1;Parent=gene-RM672_RS10005;Dbxref=GenBank:WP_037575678.1;Name=WP_037575678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638096.1;locus_tag=RM672_RS10005;product=accessory gene regulator AgrB;protein_id=WP_037575678.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 88464 88598 . + . ID=gene-RM672_RS10010;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=RM672_RS10010;old_locus_tag=RM672_10005 NZ_JAVRJS010000007.1 Protein Homology CDS 88464 88598 . + 0 ID=cds-WP_069191685.1;Parent=gene-RM672_RS10010;Dbxref=GenBank:WP_069191685.1;Name=WP_069191685.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=RM672_RS10010;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_069191685.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 88630 89928 . + . ID=gene-RM672_RS10015;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=RM672_RS10015;old_locus_tag=RM672_10010 NZ_JAVRJS010000007.1 Protein Homology CDS 88630 89928 . + 0 ID=cds-WP_375712561.1;Parent=gene-RM672_RS10015;Dbxref=GenBank:WP_375712561.1;Name=WP_375712561.1;gbkey=CDS;gene=agrC;inference=COORDINATES: protein motif:HMM:NF046015.1;locus_tag=RM672_RS10015;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_375712561.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 89943 90665 . + . ID=gene-RM672_RS10020;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=RM672_RS10020;old_locus_tag=RM672_10015 NZ_JAVRJS010000007.1 Protein Homology CDS 89943 90665 . + 0 ID=cds-WP_037575675.1;Parent=gene-RM672_RS10020;Dbxref=GenBank:WP_037575675.1;Name=WP_037575675.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=RM672_RS10020;product=quorum-sensing response regulator AgrA;protein_id=WP_037575675.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 91162 92646 . - . ID=gene-RM672_RS10025;Name=RM672_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10025;old_locus_tag=RM672_10020 NZ_JAVRJS010000007.1 Protein Homology CDS 91162 92646 . - 0 ID=cds-WP_037575672.1;Parent=gene-RM672_RS10025;Dbxref=GenBank:WP_037575672.1;Name=WP_037575672.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613916.1;locus_tag=RM672_RS10025;product=sucrose-6-phosphate hydrolase;protein_id=WP_037575672.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 92987 93211 . - . ID=gene-RM672_RS10030;Name=RM672_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10030;old_locus_tag=RM672_10025 NZ_JAVRJS010000007.1 Protein Homology CDS 92987 93211 . - 0 ID=cds-WP_037575670.1;Parent=gene-RM672_RS10030;Dbxref=GenBank:WP_037575670.1;Name=WP_037575670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=RM672_RS10030;product=sulfurtransferase TusA family protein;protein_id=WP_037575670.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 93233 94315 . - . ID=gene-RM672_RS10035;Name=RM672_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10035;old_locus_tag=RM672_10030 NZ_JAVRJS010000007.1 Protein Homology CDS 93233 94315 . - 0 ID=cds-WP_037575667.1;Parent=gene-RM672_RS10035;Dbxref=GenBank:WP_037575667.1;Name=WP_037575667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461425.1;locus_tag=RM672_RS10035;product=YeeE/YedE family protein;protein_id=WP_037575667.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 94488 95135 . - . ID=gene-RM672_RS10040;Name=RM672_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10040;old_locus_tag=RM672_10035 NZ_JAVRJS010000007.1 Protein Homology CDS 94488 95135 . - 0 ID=cds-WP_037575663.1;Parent=gene-RM672_RS10040;Dbxref=GenBank:WP_037575663.1;Name=WP_037575663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166397.1;locus_tag=RM672_RS10040;product=redox-sensing transcriptional repressor Rex;protein_id=WP_037575663.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 95421 97361 . + . ID=gene-RM672_RS10045;Name=RM672_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10045;old_locus_tag=RM672_10040 NZ_JAVRJS010000007.1 Protein Homology CDS 95421 97361 . + 0 ID=cds-WP_233655126.1;Parent=gene-RM672_RS10045;Dbxref=GenBank:WP_233655126.1;Name=WP_233655126.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425581.1;locus_tag=RM672_RS10045;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_233655126.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 97697 99319 . + . ID=gene-RM672_RS10050;Name=RM672_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10050;old_locus_tag=RM672_10045 NZ_JAVRJS010000007.1 Protein Homology CDS 97697 99319 . + 0 ID=cds-WP_233655125.1;Parent=gene-RM672_RS10050;Dbxref=GenBank:WP_233655125.1;Name=WP_233655125.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167548.1;locus_tag=RM672_RS10050;product=MutS-related protein;protein_id=WP_233655125.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 99341 100360 . - . ID=gene-RM672_RS10055;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=RM672_RS10055;old_locus_tag=RM672_10050 NZ_JAVRJS010000007.1 Protein Homology CDS 99341 100360 . - 0 ID=cds-WP_037575654.1;Parent=gene-RM672_RS10055;Dbxref=GenBank:WP_037575654.1;Name=WP_037575654.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=RM672_RS10055;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_037575654.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 100357 100779 . - . ID=gene-RM672_RS10060;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=RM672_RS10060;old_locus_tag=RM672_10055 NZ_JAVRJS010000007.1 Protein Homology CDS 100357 100779 . - 0 ID=cds-WP_371874997.1;Parent=gene-RM672_RS10060;Dbxref=GenBank:WP_371874997.1;Name=WP_371874997.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466250.1;locus_tag=RM672_RS10060;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_371874997.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 100791 101456 . - . ID=gene-RM672_RS10065;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=RM672_RS10065;old_locus_tag=RM672_10060 NZ_JAVRJS010000007.1 Protein Homology CDS 100791 101456 . - 0 ID=cds-WP_037575648.1;Parent=gene-RM672_RS10065;Dbxref=GenBank:WP_037575648.1;Name=WP_037575648.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050718.1;locus_tag=RM672_RS10065;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_037575648.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 101449 101898 . - . ID=gene-RM672_RS10070;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=RM672_RS10070;old_locus_tag=RM672_10065 NZ_JAVRJS010000007.1 Protein Homology CDS 101449 101898 . - 0 ID=cds-WP_037575645.1;Parent=gene-RM672_RS10070;Dbxref=GenBank:WP_037575645.1;Name=WP_037575645.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590797.1;locus_tag=RM672_RS10070;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_037575645.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 102319 104007 . + . ID=gene-RM672_RS10075;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=RM672_RS10075;old_locus_tag=RM672_10070 NZ_JAVRJS010000007.1 Protein Homology CDS 102319 104007 . + 0 ID=cds-WP_037575643.1;Parent=gene-RM672_RS10075;Dbxref=GenBank:WP_037575643.1;Name=WP_037575643.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=RM672_RS10075;product=dihydroxy-acid dehydratase;protein_id=WP_037575643.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 104025 105779 . + . ID=gene-RM672_RS10080;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=RM672_RS10080;old_locus_tag=RM672_10075 NZ_JAVRJS010000007.1 Protein Homology CDS 104025 105779 . + 0 ID=cds-WP_311541445.1;Parent=gene-RM672_RS10080;Dbxref=GenBank:WP_311541445.1;Name=WP_311541445.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445303.1;locus_tag=RM672_RS10080;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_311541445.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 105776 106249 . + . ID=gene-RM672_RS10085;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=RM672_RS10085;old_locus_tag=RM672_10080 NZ_JAVRJS010000007.1 Protein Homology CDS 105776 106249 . + 0 ID=cds-WP_311541444.1;Parent=gene-RM672_RS10085;Dbxref=GenBank:WP_311541444.1;Name=WP_311541444.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=RM672_RS10085;product=acetolactate synthase small subunit;protein_id=WP_311541444.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 106268 107287 . + . ID=gene-RM672_RS10090;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=RM672_RS10090;old_locus_tag=RM672_10085 NZ_JAVRJS010000007.1 Protein Homology CDS 106268 107287 . + 0 ID=cds-WP_084276051.1;Parent=gene-RM672_RS10090;Dbxref=GenBank:WP_084276051.1;Name=WP_084276051.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825891.1;locus_tag=RM672_RS10090;product=ketol-acid reductoisomerase;protein_id=WP_084276051.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 107320 108855 . + . ID=gene-RM672_RS10095;Name=RM672_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10095;old_locus_tag=RM672_10090 NZ_JAVRJS010000007.1 Protein Homology CDS 107320 108855 . + 0 ID=cds-WP_105963418.1;Parent=gene-RM672_RS10095;Dbxref=GenBank:WP_105963418.1;Name=WP_105963418.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275284.1;locus_tag=RM672_RS10095;product=2-isopropylmalate synthase;protein_id=WP_105963418.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 108852 109901 . + . ID=gene-RM672_RS10100;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=RM672_RS10100;old_locus_tag=RM672_10095 NZ_JAVRJS010000007.1 Protein Homology CDS 108852 109901 . + 0 ID=cds-WP_105963417.1;Parent=gene-RM672_RS10100;Dbxref=GenBank:WP_105963417.1;Name=WP_105963417.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=RM672_RS10100;product=3-isopropylmalate dehydrogenase;protein_id=WP_105963417.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 109905 111275 . + . ID=gene-RM672_RS10105;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=RM672_RS10105;old_locus_tag=RM672_10100 NZ_JAVRJS010000007.1 Protein Homology CDS 109905 111275 . + 0 ID=cds-WP_233655122.1;Parent=gene-RM672_RS10105;Dbxref=GenBank:WP_233655122.1;Name=WP_233655122.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384293.1;locus_tag=RM672_RS10105;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_233655122.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 111277 111849 . + . ID=gene-RM672_RS10110;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=RM672_RS10110;old_locus_tag=RM672_10105 NZ_JAVRJS010000007.1 Protein Homology CDS 111277 111849 . + 0 ID=cds-WP_105965765.1;Parent=gene-RM672_RS10110;Dbxref=GenBank:WP_105965765.1;Name=WP_105965765.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384295.1;locus_tag=RM672_RS10110;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_105965765.1;transl_table=11 NZ_JAVRJS010000007.1 RefSeq gene 111863 113131 . + . ID=gene-RM672_RS10115;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=RM672_RS10115;old_locus_tag=RM672_10110 NZ_JAVRJS010000007.1 Protein Homology CDS 111863 113131 . + 0 ID=cds-WP_233655120.1;Parent=gene-RM672_RS10115;Dbxref=GenBank:WP_233655120.1;Name=WP_233655120.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466255.1;locus_tag=RM672_RS10115;product=threonine ammonia-lyase IlvA;protein_id=WP_233655120.1;transl_table=11 ##sequence-region NZ_JAVRJS010000008.1 1 88766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000008.1 RefSeq region 1 88766 . + . ID=NZ_JAVRJS010000008.1:1..88766;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000008.1 RefSeq gene 3 76 . - . ID=gene-RM672_RS10120;Name=RM672_RS10120;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS10120;old_locus_tag=RM672_10115 NZ_JAVRJS010000008.1 tRNAscan-SE tRNA 3 76 . - . ID=rna-RM672_RS10120;Parent=gene-RM672_RS10120;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10120;product=tRNA-Gly NZ_JAVRJS010000008.1 tRNAscan-SE exon 3 76 . - . ID=exon-RM672_RS10120-1;Parent=rna-RM672_RS10120;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10120;product=tRNA-Gly NZ_JAVRJS010000008.1 RefSeq gene 99 181 . - . ID=gene-RM672_RS10125;Name=RM672_RS10125;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS10125;old_locus_tag=RM672_10120 NZ_JAVRJS010000008.1 tRNAscan-SE tRNA 99 181 . - . ID=rna-RM672_RS10125;Parent=gene-RM672_RS10125;anticodon=(pos:complement(146..148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10125;product=tRNA-Leu NZ_JAVRJS010000008.1 tRNAscan-SE exon 99 181 . - . ID=exon-RM672_RS10125-1;Parent=rna-RM672_RS10125;anticodon=(pos:complement(146..148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10125;product=tRNA-Leu NZ_JAVRJS010000008.1 RefSeq gene 631 1086 . - . ID=gene-RM672_RS10130;Name=RM672_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10130;old_locus_tag=RM672_10125 NZ_JAVRJS010000008.1 Protein Homology CDS 631 1086 . - 0 ID=cds-WP_107372196.1;Parent=gene-RM672_RS10130;Dbxref=GenBank:WP_107372196.1;Name=WP_107372196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058114.1;locus_tag=RM672_RS10130;product=SprT family protein;protein_id=WP_107372196.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 1079 3229 . - . ID=gene-RM672_RS10135;Name=RM672_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10135;old_locus_tag=RM672_10130 NZ_JAVRJS010000008.1 Protein Homology CDS 1079 3229 . - 0 ID=cds-WP_105997016.1;Parent=gene-RM672_RS10135;Dbxref=GenBank:WP_105997016.1;Name=WP_105997016.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236007.1;locus_tag=RM672_RS10135;product=Tex family protein;protein_id=WP_105997016.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 3384 4154 . - . ID=gene-RM672_RS10140;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=RM672_RS10140;old_locus_tag=RM672_10135 NZ_JAVRJS010000008.1 Protein Homology CDS 3384 4154 . - 0 ID=cds-WP_037577167.1;Parent=gene-RM672_RS10140;Dbxref=GenBank:WP_037577167.1;Name=WP_037577167.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505950.1;locus_tag=RM672_RS10140;product=RNA polymerase sigma factor SigB;protein_id=WP_037577167.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 4129 4608 . - . ID=gene-RM672_RS10145;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=RM672_RS10145;old_locus_tag=RM672_10140 NZ_JAVRJS010000008.1 Protein Homology CDS 4129 4608 . - 0 ID=cds-WP_037577169.1;Parent=gene-RM672_RS10145;Dbxref=GenBank:WP_037577169.1;Name=WP_037577169.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426491.1;locus_tag=RM672_RS10145;product=anti-sigma B factor RsbW;protein_id=WP_037577169.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 4611 4937 . - . ID=gene-RM672_RS10150;Name=RM672_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10150;old_locus_tag=RM672_10145 NZ_JAVRJS010000008.1 Protein Homology CDS 4611 4937 . - 0 ID=cds-WP_037577172.1;Parent=gene-RM672_RS10150;Dbxref=GenBank:WP_037577172.1;Name=WP_037577172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=RM672_RS10150;product=anti-sigma factor antagonist;protein_id=WP_037577172.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 5018 6022 . - . ID=gene-RM672_RS10155;Name=RM672_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10155;old_locus_tag=RM672_10150 NZ_JAVRJS010000008.1 Protein Homology CDS 5018 6022 . - 0 ID=cds-WP_037577174.1;Parent=gene-RM672_RS10155;Dbxref=GenBank:WP_037577174.1;Name=WP_037577174.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825730.1;locus_tag=RM672_RS10155;product=SpoIIE family protein phosphatase;protein_id=WP_037577174.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 6086 6439 . - . ID=gene-RM672_RS10160;Name=RM672_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10160;old_locus_tag=RM672_10155 NZ_JAVRJS010000008.1 Protein Homology CDS 6086 6439 . - 0 ID=cds-WP_103159488.1;Parent=gene-RM672_RS10160;Dbxref=GenBank:WP_103159488.1;Name=WP_103159488.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=RM672_RS10160;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_103159488.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 6440 6610 . - . ID=gene-RM672_RS10165;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=RM672_RS10165;old_locus_tag=RM672_10160 NZ_JAVRJS010000008.1 Protein Homology CDS 6440 6610 . - 0 ID=cds-WP_037577177.1;Parent=gene-RM672_RS10165;Dbxref=GenBank:WP_037577177.1;Name=WP_037577177.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=RM672_RS10165;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_037577177.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 6695 7843 . - . ID=gene-RM672_RS10170;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM672_RS10170;old_locus_tag=RM672_10165 NZ_JAVRJS010000008.1 Protein Homology CDS 6695 7843 . - 0 ID=cds-WP_037577179.1;Parent=gene-RM672_RS10170;Dbxref=GenBank:WP_037577179.1;Name=WP_037577179.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281145.1;locus_tag=RM672_RS10170;product=alanine racemase;protein_id=WP_037577179.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 7959 8309 . - . ID=gene-RM672_RS10175;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=RM672_RS10175;old_locus_tag=RM672_10170 NZ_JAVRJS010000008.1 Protein Homology CDS 7959 8309 . - 0 ID=cds-WP_037577181.1;Parent=gene-RM672_RS10175;Dbxref=GenBank:WP_037577181.1;Name=WP_037577181.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509014.1;locus_tag=RM672_RS10175;product=holo-ACP synthase;protein_id=WP_037577181.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 8306 8821 . - . ID=gene-RM672_RS10180;Name=RM672_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10180;old_locus_tag=RM672_10175 NZ_JAVRJS010000008.1 Protein Homology CDS 8306 8821 . - 0 ID=cds-WP_051605021.1;Parent=gene-RM672_RS10180;Dbxref=GenBank:WP_051605021.1;Name=WP_051605021.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM672_RS10180;product=PH domain-containing protein;protein_id=WP_051605021.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 8818 10296 . - . ID=gene-RM672_RS10185;Name=RM672_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10185;old_locus_tag=RM672_10180 NZ_JAVRJS010000008.1 Protein Homology CDS 8818 10296 . - 0 ID=cds-WP_037577183.1;Parent=gene-RM672_RS10185;Dbxref=GenBank:WP_037577183.1;Name=WP_037577183.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169261.1;locus_tag=RM672_RS10185;product=PH domain-containing protein;protein_id=WP_037577183.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 10289 10762 . - . ID=gene-RM672_RS10190;Name=RM672_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10190;old_locus_tag=RM672_10185 NZ_JAVRJS010000008.1 Protein Homology CDS 10289 10762 . - 0 ID=cds-WP_107370464.1;Parent=gene-RM672_RS10190;Dbxref=GenBank:WP_107370464.1;Name=WP_107370464.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM672_RS10190;product=PH domain-containing protein;protein_id=WP_107370464.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 11022 12506 . - . ID=gene-RM672_RS10195;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=RM672_RS10195;old_locus_tag=RM672_10190 NZ_JAVRJS010000008.1 Protein Homology CDS 11022 12506 . - 0 ID=cds-WP_103159486.1;Parent=gene-RM672_RS10195;Dbxref=GenBank:WP_103159486.1;Name=WP_103159486.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=RM672_RS10195;product=degradosome RNA helicase CshA;protein_id=WP_103159486.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 12950 14314 . - . ID=gene-RM672_RS10200;Name=RM672_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10200;old_locus_tag=RM672_10195 NZ_JAVRJS010000008.1 Protein Homology CDS 12950 14314 . - 0 ID=cds-WP_107367163.1;Parent=gene-RM672_RS10200;Dbxref=GenBank:WP_107367163.1;Name=WP_107367163.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481758.1;locus_tag=RM672_RS10200;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_107367163.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 14323 15396 . - . ID=gene-RM672_RS10205;Name=RM672_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10205;old_locus_tag=RM672_10200 NZ_JAVRJS010000008.1 Protein Homology CDS 14323 15396 . - 0 ID=cds-WP_037577189.1;Parent=gene-RM672_RS10205;Dbxref=GenBank:WP_037577189.1;Name=WP_037577189.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=RM672_RS10205;product=D-alanine--D-alanine ligase;protein_id=WP_037577189.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 15558 16769 . + . ID=gene-RM672_RS10210;Name=RM672_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10210;old_locus_tag=RM672_10205 NZ_JAVRJS010000008.1 Protein Homology CDS 15558 16769 . + 0 ID=cds-WP_037577191.1;Parent=gene-RM672_RS10210;Dbxref=GenBank:WP_037577191.1;Name=WP_037577191.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169256.1;locus_tag=RM672_RS10210;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_037577191.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 16943 17083 . - . ID=gene-RM672_RS10215;Name=RM672_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10215;old_locus_tag=RM672_10210 NZ_JAVRJS010000008.1 Protein Homology CDS 16943 17083 . - 0 ID=cds-WP_086375151.1;Parent=gene-RM672_RS10215;Dbxref=GenBank:WP_086375151.1;Name=WP_086375151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507098.1;locus_tag=RM672_RS10215;product=Lmo0850 family protein;protein_id=WP_086375151.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 17170 19350 . - . ID=gene-RM672_RS10220;Name=RM672_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10220;old_locus_tag=RM672_10215 NZ_JAVRJS010000008.1 Protein Homology CDS 17170 19350 . - 0 ID=cds-WP_233655164.1;Parent=gene-RM672_RS10220;Dbxref=GenBank:WP_233655164.1;Name=WP_233655164.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426477.1;locus_tag=RM672_RS10220;product=heavy metal translocating P-type ATPase;protein_id=WP_233655164.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 19490 19693 . - . ID=gene-RM672_RS10225;Name=RM672_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10225;old_locus_tag=RM672_10220 NZ_JAVRJS010000008.1 Protein Homology CDS 19490 19693 . - 0 ID=cds-WP_103159259.1;Parent=gene-RM672_RS10225;Dbxref=GenBank:WP_103159259.1;Name=WP_103159259.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169317.1;locus_tag=RM672_RS10225;product=heavy-metal-associated domain-containing protein;protein_id=WP_103159259.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 19695 19919 . - . ID=gene-RM672_RS10230;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=RM672_RS10230;old_locus_tag=RM672_10225 NZ_JAVRJS010000008.1 Protein Homology CDS 19695 19919 . - 0 ID=cds-WP_103159258.1;Parent=gene-RM672_RS10230;Dbxref=GenBank:WP_103159258.1;Name=WP_103159258.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426475.1;locus_tag=RM672_RS10230;product=putative copper chaperone CsoZ;protein_id=WP_103159258.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 19932 20219 . - . ID=gene-RM672_RS10235;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=RM672_RS10235;old_locus_tag=RM672_10230 NZ_JAVRJS010000008.1 Protein Homology CDS 19932 20219 . - 0 ID=cds-WP_037577199.1;Parent=gene-RM672_RS10235;Dbxref=GenBank:WP_037577199.1;Name=WP_037577199.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169315.1;locus_tag=RM672_RS10235;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_037577199.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 20355 21845 . + . ID=gene-RM672_RS10240;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM672_RS10240;old_locus_tag=RM672_10235 NZ_JAVRJS010000008.1 Protein Homology CDS 20355 21845 . + 0 ID=cds-WP_037577201.1;Parent=gene-RM672_RS10240;Dbxref=GenBank:WP_037577201.1;Name=WP_037577201.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455067.1;locus_tag=RM672_RS10240;product=cardiolipin synthase;protein_id=WP_037577201.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 21893 22483 . + . ID=gene-RM672_RS10245;Name=RM672_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10245;old_locus_tag=RM672_10240 NZ_JAVRJS010000008.1 Protein Homology CDS 21893 22483 . + 0 ID=cds-WP_103159262.1;Parent=gene-RM672_RS10245;Dbxref=GenBank:WP_103159262.1;Name=WP_103159262.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187612.1;locus_tag=RM672_RS10245;product=HD domain-containing protein;protein_id=WP_103159262.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 22535 23401 . - . ID=gene-RM672_RS10250;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM672_RS10250;old_locus_tag=RM672_10245 NZ_JAVRJS010000008.1 Protein Homology CDS 22535 23401 . - 0 ID=cds-WP_037577205.1;Parent=gene-RM672_RS10250;Dbxref=GenBank:WP_037577205.1;Name=WP_037577205.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500806.1;locus_tag=RM672_RS10250;product=membrane protein insertase YidC;protein_id=WP_037577205.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 23490 24128 . - . ID=gene-RM672_RS10255;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=RM672_RS10255;old_locus_tag=RM672_10250 NZ_JAVRJS010000008.1 Protein Homology CDS 23490 24128 . - 0 ID=cds-WP_311541451.1;Parent=gene-RM672_RS10255;Dbxref=GenBank:WP_311541451.1;Name=WP_311541451.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165814.1;locus_tag=RM672_RS10255;product=thiamine phosphate synthase;protein_id=WP_311541451.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 24133 24921 . - . ID=gene-RM672_RS10260;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=RM672_RS10260;old_locus_tag=RM672_10255 NZ_JAVRJS010000008.1 Protein Homology CDS 24133 24921 . - 0 ID=cds-WP_233655163.1;Parent=gene-RM672_RS10260;Dbxref=GenBank:WP_233655163.1;Name=WP_233655163.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175143.1;locus_tag=RM672_RS10260;product=hydroxyethylthiazole kinase;protein_id=WP_233655163.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 24923 25729 . - . ID=gene-RM672_RS10265;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM672_RS10265;old_locus_tag=RM672_10260 NZ_JAVRJS010000008.1 Protein Homology CDS 24923 25729 . - 0 ID=cds-WP_037577208.1;Parent=gene-RM672_RS10265;Dbxref=GenBank:WP_037577208.1;Name=WP_037577208.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=RM672_RS10265;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_037577208.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 25731 26411 . - . ID=gene-RM672_RS10270;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=RM672_RS10270;old_locus_tag=RM672_10265 NZ_JAVRJS010000008.1 Protein Homology CDS 25731 26411 . - 0 ID=cds-WP_311539569.1;Parent=gene-RM672_RS10270;Dbxref=GenBank:WP_311539569.1;Name=WP_311539569.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999712.1;locus_tag=RM672_RS10270;product=thiaminase II;protein_id=WP_311539569.1;transl_table=11 NZ_JAVRJS010000008.1 cmsearch riboswitch 26475 26574 . - . ID=id-NZ_JAVRJS010000008.1:26475..26574;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000008.1 RefSeq gene 26701 27507 . - . ID=gene-RM672_RS10275;Name=RM672_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10275;old_locus_tag=RM672_10270 NZ_JAVRJS010000008.1 Protein Homology CDS 26701 27507 . - 0 ID=cds-WP_105963520.1;Parent=gene-RM672_RS10275;Dbxref=GenBank:WP_105963520.1;Name=WP_105963520.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383914.1;locus_tag=RM672_RS10275;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_105963520.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 27978 28295 . - . ID=gene-RM672_RS10280;Name=RM672_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10280;old_locus_tag=RM672_10275 NZ_JAVRJS010000008.1 Protein Homology CDS 27978 28295 . - 0 ID=cds-WP_311541452.1;Parent=gene-RM672_RS10280;Dbxref=GenBank:WP_311541452.1;Name=WP_311541452.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426463.1;locus_tag=RM672_RS10280;product=single-stranded DNA-binding protein;protein_id=WP_311541452.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 28485 28925 . + . ID=gene-RM672_RS10285;Name=RM672_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10285;old_locus_tag=RM672_10280 NZ_JAVRJS010000008.1 Protein Homology CDS 28485 28925 . + 0 ID=cds-WP_037577213.1;Parent=gene-RM672_RS10285;Dbxref=GenBank:WP_037577213.1;Name=WP_037577213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722099.1;locus_tag=RM672_RS10285;product=YwpF-like family protein;protein_id=WP_037577213.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 28957 29397 . - . ID=gene-RM672_RS10290;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=RM672_RS10290;old_locus_tag=RM672_10285 NZ_JAVRJS010000008.1 Protein Homology CDS 28957 29397 . - 0 ID=cds-WP_037576630.1;Parent=gene-RM672_RS10290;Dbxref=GenBank:WP_037576630.1;Name=WP_037576630.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471640.1;locus_tag=RM672_RS10290;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_037576630.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 29397 29600 . - . ID=gene-RM672_RS10295;Name=RM672_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10295;old_locus_tag=RM672_10290 NZ_JAVRJS010000008.1 Protein Homology CDS 29397 29600 . - 0 ID=cds-WP_103159248.1;Parent=gene-RM672_RS10295;Dbxref=GenBank:WP_103159248.1;Name=WP_103159248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220231.1;locus_tag=RM672_RS10295;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_103159248.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 29587 30858 . - . ID=gene-RM672_RS10300;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=RM672_RS10300;old_locus_tag=RM672_10295 NZ_JAVRJS010000008.1 Protein Homology CDS 29587 30858 . - 0 ID=cds-WP_105963471.1;Parent=gene-RM672_RS10300;Dbxref=GenBank:WP_105963471.1;Name=WP_105963471.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302683.1;locus_tag=RM672_RS10300;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_105963471.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 30941 31174 . - . ID=gene-RM672_RS10305;Name=RM672_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10305;old_locus_tag=RM672_10300 NZ_JAVRJS010000008.1 Protein Homology CDS 30941 31174 . - 0 ID=cds-WP_037576621.1;Parent=gene-RM672_RS10305;Dbxref=GenBank:WP_037576621.1;Name=WP_037576621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384524.1;locus_tag=RM672_RS10305;product=DUF1146 family protein;protein_id=WP_037576621.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 31425 31829 . - . ID=gene-RM672_RS10310;Name=RM672_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10310;old_locus_tag=RM672_10305 NZ_JAVRJS010000008.1 Protein Homology CDS 31425 31829 . - 0 ID=cds-WP_103159247.1;Parent=gene-RM672_RS10310;Dbxref=GenBank:WP_103159247.1;Name=WP_103159247.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275244.1;locus_tag=RM672_RS10310;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_103159247.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 31851 33263 . - . ID=gene-RM672_RS10315;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=RM672_RS10315;old_locus_tag=RM672_10310 NZ_JAVRJS010000008.1 Protein Homology CDS 31851 33263 . - 0 ID=cds-WP_037576616.1;Parent=gene-RM672_RS10315;Dbxref=GenBank:WP_037576616.1;Name=WP_037576616.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=RM672_RS10315;product=F0F1 ATP synthase subunit beta;protein_id=WP_037576616.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 33288 34154 . - . ID=gene-RM672_RS10320;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=RM672_RS10320;old_locus_tag=RM672_10315 NZ_JAVRJS010000008.1 Protein Homology CDS 33288 34154 . - 0 ID=cds-WP_037576613.1;Parent=gene-RM672_RS10320;Dbxref=GenBank:WP_037576613.1;Name=WP_037576613.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157596.1;locus_tag=RM672_RS10320;product=ATP synthase F1 subunit gamma;protein_id=WP_037576613.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 34186 35694 . - . ID=gene-RM672_RS10325;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=RM672_RS10325;old_locus_tag=RM672_10320 NZ_JAVRJS010000008.1 Protein Homology CDS 34186 35694 . - 0 ID=cds-WP_037576611.1;Parent=gene-RM672_RS10325;Dbxref=GenBank:WP_037576611.1;Name=WP_037576611.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500822.1;locus_tag=RM672_RS10325;product=F0F1 ATP synthase subunit alpha;protein_id=WP_037576611.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 35722 36261 . - . ID=gene-RM672_RS10330;Name=RM672_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10330;old_locus_tag=RM672_10325 NZ_JAVRJS010000008.1 Protein Homology CDS 35722 36261 . - 0 ID=cds-WP_037576608.1;Parent=gene-RM672_RS10330;Dbxref=GenBank:WP_037576608.1;Name=WP_037576608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165805.1;locus_tag=RM672_RS10330;product=F0F1 ATP synthase subunit delta;protein_id=WP_037576608.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 36261 36767 . - . ID=gene-RM672_RS10335;Name=RM672_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10335;old_locus_tag=RM672_10330 NZ_JAVRJS010000008.1 Protein Homology CDS 36261 36767 . - 0 ID=cds-WP_037576642.1;Parent=gene-RM672_RS10335;Dbxref=GenBank:WP_037576642.1;Name=WP_037576642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461233.1;locus_tag=RM672_RS10335;product=F0F1 ATP synthase subunit B;protein_id=WP_037576642.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 37042 37254 . - . ID=gene-RM672_RS10340;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=RM672_RS10340;old_locus_tag=RM672_10335 NZ_JAVRJS010000008.1 Protein Homology CDS 37042 37254 . - 0 ID=cds-WP_037576605.1;Parent=gene-RM672_RS10340;Dbxref=GenBank:WP_037576605.1;Name=WP_037576605.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478963.1;locus_tag=RM672_RS10340;product=F0F1 ATP synthase subunit C;protein_id=WP_037576605.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 37297 38016 . - . ID=gene-RM672_RS10345;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=RM672_RS10345;old_locus_tag=RM672_10340 NZ_JAVRJS010000008.1 Protein Homology CDS 37297 38016 . - 0 ID=cds-WP_037576603.1;Parent=gene-RM672_RS10345;Dbxref=GenBank:WP_037576603.1;Name=WP_037576603.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829936.1;locus_tag=RM672_RS10345;product=F0F1 ATP synthase subunit A;protein_id=WP_037576603.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 38036 38332 . - . ID=gene-RM672_RS10350;Name=RM672_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10350;old_locus_tag=RM672_10345 NZ_JAVRJS010000008.1 Protein Homology CDS 38036 38332 . - 0 ID=cds-WP_229717321.1;Parent=gene-RM672_RS10350;Dbxref=GenBank:WP_229717321.1;Name=WP_229717321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=RM672_RS10350;product=hypothetical protein;protein_id=WP_229717321.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 38559 39698 . - . ID=gene-RM672_RS10355;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM672_RS10355;old_locus_tag=RM672_10350 NZ_JAVRJS010000008.1 Protein Homology CDS 38559 39698 . - 0 ID=cds-WP_037576597.1;Parent=gene-RM672_RS10355;Dbxref=GenBank:WP_037576597.1;Name=WP_037576597.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912263.1;locus_tag=RM672_RS10355;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_037576597.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 39726 40355 . - . ID=gene-RM672_RS10360;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=RM672_RS10360;old_locus_tag=RM672_10355 NZ_JAVRJS010000008.1 Protein Homology CDS 39726 40355 . - 0 ID=cds-WP_037576594.1;Parent=gene-RM672_RS10360;Dbxref=GenBank:WP_037576594.1;Name=WP_037576594.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=RM672_RS10360;product=uracil phosphoribosyltransferase;protein_id=WP_037576594.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 40378 41616 . - . ID=gene-RM672_RS10365;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=RM672_RS10365;old_locus_tag=RM672_10360 NZ_JAVRJS010000008.1 Protein Homology CDS 40378 41616 . - 0 ID=cds-WP_103159245.1;Parent=gene-RM672_RS10365;Dbxref=GenBank:WP_103159245.1;Name=WP_103159245.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507071.1;locus_tag=RM672_RS10365;product=serine hydroxymethyltransferase;protein_id=WP_103159245.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 41639 42166 . - . ID=gene-RM672_RS10370;Name=RM672_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10370;old_locus_tag=RM672_10365 NZ_JAVRJS010000008.1 Protein Homology CDS 41639 42166 . - 0 ID=cds-WP_037576588.1;Parent=gene-RM672_RS10370;Dbxref=GenBank:WP_037576588.1;Name=WP_037576588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=RM672_RS10370;product=TIGR01440 family protein;protein_id=WP_037576588.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 42291 42710 . - . ID=gene-RM672_RS10375;Name=RM672_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10375;old_locus_tag=RM672_10370 NZ_JAVRJS010000008.1 Protein Homology CDS 42291 42710 . - 0 ID=cds-WP_037576586.1;Parent=gene-RM672_RS10375;Dbxref=GenBank:WP_037576586.1;Name=WP_037576586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=RM672_RS10375;product=low molecular weight protein arginine phosphatase;protein_id=WP_037576586.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 42707 43756 . - . ID=gene-RM672_RS10380;Name=RM672_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10380;old_locus_tag=RM672_10375 NZ_JAVRJS010000008.1 Protein Homology CDS 42707 43756 . - 0 ID=cds-WP_172458459.1;Parent=gene-RM672_RS10380;Dbxref=GenBank:WP_172458459.1;Name=WP_172458459.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275230.1;locus_tag=RM672_RS10380;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_172458459.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 43844 44686 . - . ID=gene-RM672_RS10385;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=RM672_RS10385;old_locus_tag=RM672_10380 NZ_JAVRJS010000008.1 Protein Homology CDS 43844 44686 . - 0 ID=cds-WP_103159243.1;Parent=gene-RM672_RS10385;Dbxref=GenBank:WP_103159243.1;Name=WP_103159243.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=RM672_RS10385;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_103159243.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 44676 45752 . - . ID=gene-RM672_RS10390;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=RM672_RS10390;old_locus_tag=RM672_10385 NZ_JAVRJS010000008.1 Protein Homology CDS 44676 45752 . - 0 ID=cds-WP_103159242.1;Parent=gene-RM672_RS10390;Dbxref=GenBank:WP_103159242.1;Name=WP_103159242.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=RM672_RS10390;product=peptide chain release factor 1;protein_id=WP_103159242.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 45756 46352 . - . ID=gene-RM672_RS10395;Name=RM672_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10395;old_locus_tag=RM672_10390 NZ_JAVRJS010000008.1 Protein Homology CDS 45756 46352 . - 0 ID=cds-WP_311542503.1;Parent=gene-RM672_RS10395;Dbxref=GenBank:WP_311542503.1;Name=WP_311542503.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=RM672_RS10395;product=thymidine kinase;protein_id=WP_311542503.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 46583 46837 . - . ID=gene-RM672_RS10400;Name=RM672_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10400;old_locus_tag=RM672_10395 NZ_JAVRJS010000008.1 Protein Homology CDS 46583 46837 . - 0 ID=cds-WP_037576577.1;Parent=gene-RM672_RS10400;Dbxref=GenBank:WP_037576577.1;Name=WP_037576577.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=RM672_RS10400;product=type B 50S ribosomal protein L31;protein_id=WP_037576577.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 46959 48275 . - . ID=gene-RM672_RS10405;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=RM672_RS10405;old_locus_tag=RM672_10400 NZ_JAVRJS010000008.1 Protein Homology CDS 46959 48275 . - 0 ID=cds-WP_037576574.1;Parent=gene-RM672_RS10405;Dbxref=GenBank:WP_037576574.1;Name=WP_037576574.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=RM672_RS10405;product=transcription termination factor Rho;protein_id=WP_037576574.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 48459 49889 . - . ID=gene-RM672_RS10410;Name=RM672_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10410;old_locus_tag=RM672_10405 NZ_JAVRJS010000008.1 Protein Homology CDS 48459 49889 . - 0 ID=cds-WP_103159240.1;Parent=gene-RM672_RS10410;Dbxref=GenBank:WP_103159240.1;Name=WP_103159240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=RM672_RS10410;product=aldehyde dehydrogenase family protein;protein_id=WP_103159240.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 50103 50429 . - . ID=gene-RM672_RS10415;Name=RM672_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10415;old_locus_tag=RM672_10410 NZ_JAVRJS010000008.1 Protein Homology CDS 50103 50429 . - 0 ID=cds-WP_103159239.1;Parent=gene-RM672_RS10415;Dbxref=GenBank:WP_103159239.1;Name=WP_103159239.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165793.1;locus_tag=RM672_RS10415;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_103159239.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 50478 51743 . - . ID=gene-RM672_RS10420;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=RM672_RS10420;old_locus_tag=RM672_10415 NZ_JAVRJS010000008.1 Protein Homology CDS 50478 51743 . - 0 ID=cds-WP_103159238.1;Parent=gene-RM672_RS10420;Dbxref=GenBank:WP_103159238.1;Name=WP_103159238.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=RM672_RS10420;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_103159238.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 51987 52859 . - . ID=gene-RM672_RS10425;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=RM672_RS10425;old_locus_tag=RM672_10420 NZ_JAVRJS010000008.1 Protein Homology CDS 51987 52859 . - 0 ID=cds-WP_037576564.1;Parent=gene-RM672_RS10425;Dbxref=GenBank:WP_037576564.1;Name=WP_037576564.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=RM672_RS10425;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_037576564.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 53076 53597 . + . ID=gene-RM672_RS10430;Name=RM672_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10430;old_locus_tag=RM672_10425 NZ_JAVRJS010000008.1 Protein Homology CDS 53076 53597 . + 0 ID=cds-WP_037576561.1;Parent=gene-RM672_RS10430;Dbxref=GenBank:WP_037576561.1;Name=WP_037576561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808089.1;locus_tag=RM672_RS10430;product=DUF2529 family protein;protein_id=WP_037576561.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 53661 55268 . - . ID=gene-RM672_RS10435;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=RM672_RS10435;old_locus_tag=RM672_10430 NZ_JAVRJS010000008.1 Protein Homology CDS 53661 55268 . - 0 ID=cds-WP_233655161.1;Parent=gene-RM672_RS10435;Dbxref=GenBank:WP_233655161.1;Name=WP_233655161.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500844.1;locus_tag=RM672_RS10435;product=CTP synthase;protein_id=WP_233655161.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 55664 56197 . - . ID=gene-RM672_RS10440;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=RM672_RS10440;old_locus_tag=RM672_10435 NZ_JAVRJS010000008.1 Protein Homology CDS 55664 56197 . - 0 ID=cds-WP_037576556.1;Parent=gene-RM672_RS10440;Dbxref=GenBank:WP_037576556.1;Name=WP_037576556.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=RM672_RS10440;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_037576556.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 56366 57226 . - . ID=gene-RM672_RS10445;Name=RM672_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10445;old_locus_tag=RM672_10440 NZ_JAVRJS010000008.1 Protein Homology CDS 56366 57226 . - 0 ID=cds-WP_037576553.1;Parent=gene-RM672_RS10445;Dbxref=GenBank:WP_037576553.1;Name=WP_037576553.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=RM672_RS10445;product=GNAT family N-acetyltransferase;protein_id=WP_037576553.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 57314 58915 . + . ID=gene-RM672_RS10450;Name=RM672_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10450;old_locus_tag=RM672_10445 NZ_JAVRJS010000008.1 Protein Homology CDS 57314 58915 . + 0 ID=cds-WP_037576550.1;Parent=gene-RM672_RS10450;Dbxref=GenBank:WP_037576550.1;Name=WP_037576550.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=RM672_RS10450;product=BCCT family transporter;protein_id=WP_037576550.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 58958 59326 . - . ID=gene-RM672_RS10455;Name=RM672_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10455;old_locus_tag=RM672_10450 NZ_JAVRJS010000008.1 Protein Homology CDS 58958 59326 . - 0 ID=cds-WP_311541453.1;Parent=gene-RM672_RS10455;Dbxref=GenBank:WP_311541453.1;Name=WP_311541453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900879.1;locus_tag=RM672_RS10455;product=VOC family protein;protein_id=WP_311541453.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 59433 60230 . + . ID=gene-RM672_RS10460;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=RM672_RS10460;old_locus_tag=RM672_10455 NZ_JAVRJS010000008.1 Protein Homology CDS 59433 60230 . + 0 ID=cds-WP_037576548.1;Parent=gene-RM672_RS10460;Dbxref=GenBank:WP_037576548.1;Name=WP_037576548.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=RM672_RS10460;product=type II pantothenate kinase;protein_id=WP_037576548.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 60403 61074 . - . ID=gene-RM672_RS10465;Name=RM672_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10465;old_locus_tag=RM672_10460 NZ_JAVRJS010000008.1 Protein Homology CDS 60403 61074 . - 0 ID=cds-WP_037576545.1;Parent=gene-RM672_RS10465;Dbxref=GenBank:WP_037576545.1;Name=WP_037576545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120545.1;locus_tag=RM672_RS10465;product=DUF2750 domain-containing protein;protein_id=WP_037576545.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 61165 62346 . - . ID=gene-RM672_RS10470;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=RM672_RS10470;old_locus_tag=RM672_10465 NZ_JAVRJS010000008.1 Protein Homology CDS 61165 62346 . - 0 ID=cds-WP_103159235.1;Parent=gene-RM672_RS10470;Dbxref=GenBank:WP_103159235.1;Name=WP_103159235.1;Ontology_term=GO:0006555,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=RM672_RS10470;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_103159235.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 62347 63531 . - . ID=gene-RM672_RS10475;Name=RM672_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10475;old_locus_tag=RM672_10470 NZ_JAVRJS010000008.1 Protein Homology CDS 62347 63531 . - 0 ID=cds-WP_037576542.1;Parent=gene-RM672_RS10475;Dbxref=GenBank:WP_037576542.1;Name=WP_037576542.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426424.1;locus_tag=RM672_RS10475;product=M20 family metallopeptidase;protein_id=WP_037576542.1;transl_table=11 NZ_JAVRJS010000008.1 cmsearch riboswitch 63626 63735 . - . ID=id-NZ_JAVRJS010000008.1:63626..63735;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJS010000008.1 RefSeq gene 63962 64429 . + . ID=gene-RM672_RS10480;Name=RM672_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10480;old_locus_tag=RM672_10475 NZ_JAVRJS010000008.1 Protein Homology CDS 63962 64429 . + 0 ID=cds-WP_037576541.1;Parent=gene-RM672_RS10480;Dbxref=GenBank:WP_037576541.1;Name=WP_037576541.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=RM672_RS10480;product=S-ribosylhomocysteine lyase;protein_id=WP_037576541.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 64528 64881 . - . ID=gene-RM672_RS10485;Name=RM672_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10485;old_locus_tag=RM672_10480 NZ_JAVRJS010000008.1 Protein Homology CDS 64528 64881 . - 0 ID=cds-WP_037576538.1;Parent=gene-RM672_RS10485;Dbxref=GenBank:WP_037576538.1;Name=WP_037576538.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=RM672_RS10485;product=DoxX family protein;protein_id=WP_037576538.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 64888 66189 . - . ID=gene-RM672_RS10490;Name=RM672_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10490;old_locus_tag=RM672_10485 NZ_JAVRJS010000008.1 Protein Homology CDS 64888 66189 . - 0 ID=cds-WP_311541454.1;Parent=gene-RM672_RS10490;Dbxref=GenBank:WP_311541454.1;Name=WP_311541454.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=RM672_RS10490;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_311541454.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 66399 67109 . + . ID=gene-RM672_RS10495;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM672_RS10495;old_locus_tag=RM672_10490 NZ_JAVRJS010000008.1 Protein Homology CDS 66399 67109 . + 0 ID=cds-WP_311541456.1;Parent=gene-RM672_RS10495;Dbxref=GenBank:WP_311541456.1;Name=WP_311541456.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=RM672_RS10495;product=purine-nucleoside phosphorylase;protein_id=WP_311541456.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 67274 67699 . - . ID=gene-RM672_RS10500;Name=RM672_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10500;old_locus_tag=RM672_10495 NZ_JAVRJS010000008.1 Protein Homology CDS 67274 67699 . - 0 ID=cds-WP_037576530.1;Parent=gene-RM672_RS10500;Dbxref=GenBank:WP_037576530.1;Name=WP_037576530.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123303.1;locus_tag=RM672_RS10500;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_037576530.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 67809 69236 . - . ID=gene-RM672_RS10505;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM672_RS10505;old_locus_tag=RM672_10500 NZ_JAVRJS010000008.1 Protein Homology CDS 67809 69236 . - 0 ID=cds-WP_037576527.1;Parent=gene-RM672_RS10505;Dbxref=GenBank:WP_037576527.1;Name=WP_037576527.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506651.1;locus_tag=RM672_RS10505;product=Na+/H+ antiporter NhaC;protein_id=WP_037576527.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 69601 70965 . - . ID=gene-RM672_RS10510;Name=RM672_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10510;old_locus_tag=RM672_10505 NZ_JAVRJS010000008.1 Protein Homology CDS 69601 70965 . - 0 ID=cds-WP_105963460.1;Parent=gene-RM672_RS10510;Dbxref=GenBank:WP_105963460.1;Name=WP_105963460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=RM672_RS10510;product=EVE domain-containing protein;protein_id=WP_105963460.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 71034 71270 . - . ID=gene-RM672_RS10515;Name=RM672_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10515;old_locus_tag=RM672_10510 NZ_JAVRJS010000008.1 Protein Homology CDS 71034 71270 . - 0 ID=cds-WP_037576636.1;Parent=gene-RM672_RS10515;Dbxref=GenBank:WP_037576636.1;Name=WP_037576636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426417.1;locus_tag=RM672_RS10515;product=hypothetical protein;protein_id=WP_037576636.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 71287 72225 . - . ID=gene-RM672_RS10520;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=RM672_RS10520;old_locus_tag=RM672_10515 NZ_JAVRJS010000008.1 Protein Homology CDS 71287 72225 . - 0 ID=cds-WP_105963459.1;Parent=gene-RM672_RS10520;Dbxref=GenBank:WP_105963459.1;Name=WP_105963459.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=RM672_RS10520;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_105963459.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 72392 73093 . - . ID=gene-RM672_RS10525;Name=RM672_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10525;old_locus_tag=RM672_10520 NZ_JAVRJS010000008.1 Protein Homology CDS 72392 73093 . - 0 ID=cds-WP_037576519.1;Parent=gene-RM672_RS10525;Dbxref=GenBank:WP_037576519.1;Name=WP_037576519.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729460.1;locus_tag=RM672_RS10525;product=FadR/GntR family transcriptional regulator;protein_id=WP_037576519.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 73334 74245 . + . ID=gene-RM672_RS10530;Name=RM672_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10530;old_locus_tag=RM672_10525 NZ_JAVRJS010000008.1 GeneMarkS-2+ CDS 73334 74245 . + 0 ID=cds-WP_037576517.1;Parent=gene-RM672_RS10530;Dbxref=GenBank:WP_037576517.1;Name=WP_037576517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS10530;product=hypothetical protein;protein_id=WP_037576517.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 74321 75175 . - . ID=gene-RM672_RS10535;Name=RM672_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10535;old_locus_tag=RM672_10530 NZ_JAVRJS010000008.1 Protein Homology CDS 74321 75175 . - 0 ID=cds-WP_311542504.1;Parent=gene-RM672_RS10535;Dbxref=GenBank:WP_311542504.1;Name=WP_311542504.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451699.1;locus_tag=RM672_RS10535;product=HAD family hydrolase;protein_id=WP_311542504.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 75244 76023 . - . ID=gene-RM672_RS10540;Name=RM672_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10540;old_locus_tag=RM672_10535 NZ_JAVRJS010000008.1 Protein Homology CDS 75244 76023 . - 0 ID=cds-WP_136732235.1;Parent=gene-RM672_RS10540;Dbxref=GenBank:WP_136732235.1;Name=WP_136732235.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=RM672_RS10540;product=ABC transporter ATP-binding protein;protein_id=WP_136732235.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 76126 77928 . - . ID=gene-RM672_RS10545;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=RM672_RS10545;old_locus_tag=RM672_10540 NZ_JAVRJS010000008.1 Protein Homology CDS 76126 77928 . - 0 ID=cds-WP_037576514.1;Parent=gene-RM672_RS10545;Dbxref=GenBank:WP_037576514.1;Name=WP_037576514.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=RM672_RS10545;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_037576514.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 78669 80210 . + . ID=gene-RM672_RS10550;Name=RM672_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10550;old_locus_tag=RM672_10545 NZ_JAVRJS010000008.1 Protein Homology CDS 78669 80210 . + 0 ID=cds-WP_107366634.1;Parent=gene-RM672_RS10550;Dbxref=GenBank:WP_107366634.1;Name=WP_107366634.1;Ontology_term=GO:0009401,GO:0015797,GO:0022872,GO:0090565,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA,protein-phosphocysteine-mannitol phosphotransferase system transporter activity|0090565||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannitol transmembrane transport|0015797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482675.1;locus_tag=RM672_RS10550;product=PTS mannitol transporter subunit IIBC;protein_id=WP_107366634.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 80257 82278 . + . ID=gene-RM672_RS10555;Name=RM672_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10555;old_locus_tag=RM672_10550 NZ_JAVRJS010000008.1 Protein Homology CDS 80257 82278 . + 0 ID=cds-WP_311542505.1;Parent=gene-RM672_RS10555;Dbxref=GenBank:WP_311542505.1;Name=WP_311542505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168357.1;locus_tag=RM672_RS10555;product=BglG family transcription antiterminator;protein_id=WP_311542505.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 82291 82725 . + . ID=gene-RM672_RS10560;Name=RM672_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10560;old_locus_tag=RM672_10555 NZ_JAVRJS010000008.1 Protein Homology CDS 82291 82725 . + 0 ID=cds-WP_105965782.1;Parent=gene-RM672_RS10560;Dbxref=GenBank:WP_105965782.1;Name=WP_105965782.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729468.1;locus_tag=RM672_RS10560;product=PTS mannitol transporter subunit IIA;protein_id=WP_105965782.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 82725 83828 . + . ID=gene-RM672_RS10565;Name=RM672_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10565;old_locus_tag=RM672_10560 NZ_JAVRJS010000008.1 Protein Homology CDS 82725 83828 . + 0 ID=cds-WP_311541457.1;Parent=gene-RM672_RS10565;Dbxref=GenBank:WP_311541457.1;Name=WP_311541457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302636.1;locus_tag=RM672_RS10565;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_311541457.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 83884 85233 . - . ID=gene-RM672_RS10570;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=RM672_RS10570;old_locus_tag=RM672_10565 NZ_JAVRJS010000008.1 Protein Homology CDS 83884 85233 . - 0 ID=cds-WP_037576510.1;Parent=gene-RM672_RS10570;Dbxref=GenBank:WP_037576510.1;Name=WP_037576510.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500881.1;locus_tag=RM672_RS10570;product=phosphoglucosamine mutase;protein_id=WP_037576510.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 85261 86193 . - . ID=gene-RM672_RS10575;Name=RM672_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10575;old_locus_tag=RM672_10570 NZ_JAVRJS010000008.1 Protein Homology CDS 85261 86193 . - 0 ID=cds-WP_103159226.1;Parent=gene-RM672_RS10575;Dbxref=GenBank:WP_103159226.1;Name=WP_103159226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=RM672_RS10575;product=CdaR family protein;protein_id=WP_103159226.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 86194 87000 . - . ID=gene-RM672_RS10580;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=RM672_RS10580;old_locus_tag=RM672_10575 NZ_JAVRJS010000008.1 Protein Homology CDS 86194 87000 . - 0 ID=cds-WP_037576505.1;Parent=gene-RM672_RS10580;Dbxref=GenBank:WP_037576505.1;Name=WP_037576505.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453752.1;locus_tag=RM672_RS10580;product=diadenylate cyclase CdaA;protein_id=WP_037576505.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 87153 88058 . - . ID=gene-RM672_RS10585;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=RM672_RS10585;old_locus_tag=RM672_10580 NZ_JAVRJS010000008.1 Protein Homology CDS 87153 88058 . - 0 ID=cds-WP_105965785.1;Parent=gene-RM672_RS10585;Dbxref=GenBank:WP_105965785.1;Name=WP_105965785.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=RM672_RS10585;product=arginase;protein_id=WP_105965785.1;transl_table=11 NZ_JAVRJS010000008.1 RefSeq gene 88538 88610 . - . ID=gene-RM672_RS10590;Name=RM672_RS10590;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS10590;old_locus_tag=RM672_10585 NZ_JAVRJS010000008.1 tRNAscan-SE tRNA 88538 88610 . - . ID=rna-RM672_RS10590;Parent=gene-RM672_RS10590;anticodon=(pos:complement(88575..88577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10590;product=tRNA-Lys NZ_JAVRJS010000008.1 tRNAscan-SE exon 88538 88610 . - . ID=exon-RM672_RS10590-1;Parent=rna-RM672_RS10590;anticodon=(pos:complement(88575..88577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10590;product=tRNA-Lys NZ_JAVRJS010000008.1 RefSeq gene 88614 88688 . - . ID=gene-RM672_RS10595;Name=RM672_RS10595;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM672_RS10595;old_locus_tag=RM672_10590 NZ_JAVRJS010000008.1 tRNAscan-SE tRNA 88614 88688 . - . ID=rna-RM672_RS10595;Parent=gene-RM672_RS10595;anticodon=(pos:complement(88654..88656));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10595;product=tRNA-Gln NZ_JAVRJS010000008.1 tRNAscan-SE exon 88614 88688 . - . ID=exon-RM672_RS10595-1;Parent=rna-RM672_RS10595;anticodon=(pos:complement(88654..88656));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM672_RS10595;product=tRNA-Gln ##sequence-region NZ_JAVRJS010000009.1 1 71377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJS010000009.1 RefSeq region 1 71377 . + . ID=NZ_JAVRJS010000009.1:1..71377;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST151 NZ_JAVRJS010000009.1 RefSeq gene 1 768 . + . ID=gene-RM672_RS10600;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM672_RS10600;old_locus_tag=RM672_10595;partial=true;start_range=.,1 NZ_JAVRJS010000009.1 Protein Homology CDS 1 768 . + 0 ID=cds-WP_311541483.1;Parent=gene-RM672_RS10600;Dbxref=GenBank:WP_311541483.1;Name=WP_311541483.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM672_RS10600;partial=true;product=phosphopentomutase;protein_id=WP_311541483.1;start_range=.,1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 922 1785 . + . ID=gene-RM672_RS10605;Name=RM672_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10605;old_locus_tag=RM672_10600 NZ_JAVRJS010000009.1 Protein Homology CDS 922 1785 . + 0 ID=cds-WP_311541482.1;Parent=gene-RM672_RS10605;Dbxref=GenBank:WP_311541482.1;Name=WP_311541482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719336.1;locus_tag=RM672_RS10605;product=alpha/beta hydrolase;protein_id=WP_311541482.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 1824 2558 . - . ID=gene-RM672_RS10610;Name=RM672_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10610;old_locus_tag=RM672_10605 NZ_JAVRJS010000009.1 Protein Homology CDS 1824 2558 . - 0 ID=cds-WP_311541481.1;Parent=gene-RM672_RS10610;Dbxref=GenBank:WP_311541481.1;Name=WP_311541481.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901672.1;locus_tag=RM672_RS10610;product=NAD-dependent protein deacylase;protein_id=WP_311541481.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 2796 6056 . + . ID=gene-RM672_RS10615;Name=RM672_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10615;old_locus_tag=RM672_10610 NZ_JAVRJS010000009.1 Protein Homology CDS 2796 6056 . + 0 ID=cds-WP_311541480.1;Parent=gene-RM672_RS10615;Dbxref=GenBank:WP_311541480.1;Name=WP_311541480.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF015102.7;locus_tag=RM672_RS10615;product=DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein;protein_id=WP_311541480.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 6057 7286 . + . ID=gene-RM672_RS10620;Name=RM672_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10620;old_locus_tag=RM672_10615 NZ_JAVRJS010000009.1 Protein Homology CDS 6057 7286 . + 0 ID=cds-WP_311541479.1;Parent=gene-RM672_RS10620;Dbxref=GenBank:WP_311541479.1;Name=WP_311541479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499587.1;locus_tag=RM672_RS10620;product=ParB N-terminal domain-containing protein;protein_id=WP_311541479.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 7261 9132 . + . ID=gene-RM672_RS10625;Name=RM672_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10625;old_locus_tag=RM672_10620 NZ_JAVRJS010000009.1 Protein Homology CDS 7261 9132 . + 0 ID=cds-WP_311541478.1;Parent=gene-RM672_RS10625;Dbxref=GenBank:WP_311541478.1;Name=WP_311541478.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499586.1;locus_tag=RM672_RS10625;product=DEAD/DEAH box helicase;protein_id=WP_311541478.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 9241 10605 . + . ID=gene-RM672_RS10630;Name=RM672_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10630;old_locus_tag=RM672_10625 NZ_JAVRJS010000009.1 Protein Homology CDS 9241 10605 . + 0 ID=cds-WP_311541477.1;Parent=gene-RM672_RS10630;Dbxref=GenBank:WP_311541477.1;Name=WP_311541477.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649664.1;locus_tag=RM672_RS10630;product=AAA family ATPase;protein_id=WP_311541477.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 10598 11635 . + . ID=gene-RM672_RS10635;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=RM672_RS10635;old_locus_tag=RM672_10630 NZ_JAVRJS010000009.1 Protein Homology CDS 10598 11635 . + 0 ID=cds-WP_107378400.1;Parent=gene-RM672_RS10635;Dbxref=GenBank:WP_107378400.1;Name=WP_107378400.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449326.1;locus_tag=RM672_RS10635;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WP_107378400.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 11705 12202 . + . ID=gene-RM672_RS10640;Name=RM672_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10640;old_locus_tag=RM672_10635 NZ_JAVRJS010000009.1 Protein Homology CDS 11705 12202 . + 0 ID=cds-WP_037576752.1;Parent=gene-RM672_RS10640;Dbxref=GenBank:WP_037576752.1;Name=WP_037576752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM672_RS10640;product=DUF805 domain-containing protein;protein_id=WP_037576752.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 12389 12889 . + . ID=gene-RM672_RS10645;Name=RM672_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10645;old_locus_tag=RM672_10640 NZ_JAVRJS010000009.1 Protein Homology CDS 12389 12889 . + 0 ID=cds-WP_051605017.1;Parent=gene-RM672_RS10645;Dbxref=GenBank:WP_051605017.1;Name=WP_051605017.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM672_RS10645;product=DUF805 domain-containing protein;protein_id=WP_051605017.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 13098 14480 . + . ID=gene-RM672_RS10650;Name=RM672_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10650;old_locus_tag=RM672_10645 NZ_JAVRJS010000009.1 Protein Homology CDS 13098 14480 . + 0 ID=cds-WP_311541476.1;Parent=gene-RM672_RS10650;Dbxref=GenBank:WP_311541476.1;Name=WP_311541476.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479375.1;locus_tag=RM672_RS10650;product=cryptochrome/photolyase family protein;protein_id=WP_311541476.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 14639 15247 . - . ID=gene-RM672_RS10655;Name=RM672_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10655;old_locus_tag=RM672_10650 NZ_JAVRJS010000009.1 Protein Homology CDS 14639 15247 . - 0 ID=cds-WP_107366432.1;Parent=gene-RM672_RS10655;Dbxref=GenBank:WP_107366432.1;Name=WP_107366432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506433.1;locus_tag=RM672_RS10655;product=methyltransferase domain-containing protein;protein_id=WP_107366432.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 15417 16610 . + . ID=gene-RM672_RS10660;Name=RM672_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10660;old_locus_tag=RM672_10655 NZ_JAVRJS010000009.1 Protein Homology CDS 15417 16610 . + 0 ID=cds-WP_311541475.1;Parent=gene-RM672_RS10660;Dbxref=GenBank:WP_311541475.1;Name=WP_311541475.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006637724.1;locus_tag=RM672_RS10660;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311541475.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 16736 16939 . + . ID=gene-RM672_RS10665;Name=RM672_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10665;old_locus_tag=RM672_10660 NZ_JAVRJS010000009.1 Protein Homology CDS 16736 16939 . + 0 ID=cds-WP_105997002.1;Parent=gene-RM672_RS10665;Dbxref=GenBank:WP_105997002.1;Name=WP_105997002.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=RM672_RS10665;product=helix-turn-helix transcriptional regulator;protein_id=WP_105997002.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 16936 17655 . + . ID=gene-RM672_RS10670;Name=RM672_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10670;old_locus_tag=RM672_10665 NZ_JAVRJS010000009.1 Protein Homology CDS 16936 17655 . + 0 ID=cds-WP_107366430.1;Parent=gene-RM672_RS10670;Dbxref=GenBank:WP_107366430.1;Name=WP_107366430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.7;locus_tag=RM672_RS10670;product=DUF3169 family protein;protein_id=WP_107366430.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 17848 18384 . + . ID=gene-RM672_RS10675;Name=RM672_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10675;old_locus_tag=RM672_10670 NZ_JAVRJS010000009.1 Protein Homology CDS 17848 18384 . + 0 ID=cds-WP_311541473.1;Parent=gene-RM672_RS10675;Dbxref=GenBank:WP_311541473.1;Name=WP_311541473.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898483.1;locus_tag=RM672_RS10675;product=TetR/AcrR family transcriptional regulator;protein_id=WP_311541473.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 18737 19933 . + . ID=gene-RM672_RS10680;Name=RM672_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10680;old_locus_tag=RM672_10675 NZ_JAVRJS010000009.1 Protein Homology CDS 18737 19933 . + 0 ID=cds-WP_037576731.1;Parent=gene-RM672_RS10680;Dbxref=GenBank:WP_037576731.1;Name=WP_037576731.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473374.1;locus_tag=RM672_RS10680;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_037576731.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 19930 20565 . + . ID=gene-RM672_RS10685;Name=RM672_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10685;old_locus_tag=RM672_10680 NZ_JAVRJS010000009.1 Protein Homology CDS 19930 20565 . + 0 ID=cds-WP_037576728.1;Parent=gene-RM672_RS10685;Dbxref=GenBank:WP_037576728.1;Name=WP_037576728.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471024.1;locus_tag=RM672_RS10685;product=ABC transporter permease;protein_id=WP_037576728.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 20583 21524 . + . ID=gene-RM672_RS10690;Name=RM672_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10690;old_locus_tag=RM672_10685 NZ_JAVRJS010000009.1 Protein Homology CDS 20583 21524 . + 0 ID=cds-WP_037576725.1;Parent=gene-RM672_RS10690;Dbxref=GenBank:WP_037576725.1;Name=WP_037576725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302416.1;locus_tag=RM672_RS10690;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_037576725.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 21524 22201 . + . ID=gene-RM672_RS10695;Name=RM672_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10695;old_locus_tag=RM672_10690 NZ_JAVRJS010000009.1 Protein Homology CDS 21524 22201 . + 0 ID=cds-WP_037576723.1;Parent=gene-RM672_RS10695;Dbxref=GenBank:WP_037576723.1;Name=WP_037576723.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470117.1;locus_tag=RM672_RS10695;product=ABC transporter permease;protein_id=WP_037576723.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 22217 22975 . + . ID=gene-RM672_RS10700;Name=RM672_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10700;old_locus_tag=RM672_10695 NZ_JAVRJS010000009.1 Protein Homology CDS 22217 22975 . + 0 ID=cds-WP_037576721.1;Parent=gene-RM672_RS10700;Dbxref=GenBank:WP_037576721.1;Name=WP_037576721.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464138.1;locus_tag=RM672_RS10700;product=alpha/beta hydrolase;protein_id=WP_037576721.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq pseudogene 23124 24233 . + . ID=gene-RM672_RS10705;Name=RM672_RS10705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS10705;old_locus_tag=RM672_10700;pseudo=true NZ_JAVRJS010000009.1 Protein Homology CDS 23124 24233 . + 0 ID=cds-RM672_RS10705;Parent=gene-RM672_RS10705;Note=internal stop;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466314.1;locus_tag=RM672_RS10705;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 24227 25576 . + . ID=gene-RM672_RS10710;Name=RM672_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10710;old_locus_tag=RM672_10705 NZ_JAVRJS010000009.1 Protein Homology CDS 24227 25576 . + 0 ID=cds-WP_311541471.1;Parent=gene-RM672_RS10710;Dbxref=GenBank:WP_311541471.1;Name=WP_311541471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=RM672_RS10710;product=nucleoside recognition domain-containing protein;protein_id=WP_311541471.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 25666 26370 . - . ID=gene-RM672_RS10715;Name=RM672_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10715;old_locus_tag=RM672_10710 NZ_JAVRJS010000009.1 Protein Homology CDS 25666 26370 . - 0 ID=cds-WP_051605016.1;Parent=gene-RM672_RS10715;Dbxref=GenBank:WP_051605016.1;Name=WP_051605016.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM672_RS10715;product=Crp/Fnr family transcriptional regulator;protein_id=WP_051605016.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 26392 27333 . - . ID=gene-RM672_RS10720;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=RM672_RS10720;old_locus_tag=RM672_10715 NZ_JAVRJS010000009.1 Protein Homology CDS 26392 27333 . - 0 ID=cds-WP_103159153.1;Parent=gene-RM672_RS10720;Dbxref=GenBank:WP_103159153.1;Name=WP_103159153.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660031.1;locus_tag=RM672_RS10720;product=carbamate kinase;protein_id=WP_103159153.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 27350 28768 . - . ID=gene-RM672_RS10725;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=RM672_RS10725;old_locus_tag=RM672_10720 NZ_JAVRJS010000009.1 Protein Homology CDS 27350 28768 . - 0 ID=cds-WP_103159154.1;Parent=gene-RM672_RS10725;Dbxref=GenBank:WP_103159154.1;Name=WP_103159154.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464536.1;locus_tag=RM672_RS10725;product=arginine-ornithine antiporter;protein_id=WP_103159154.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 28865 29872 . - . ID=gene-RM672_RS10730;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM672_RS10730;old_locus_tag=RM672_10725 NZ_JAVRJS010000009.1 Protein Homology CDS 28865 29872 . - 0 ID=cds-WP_103159155.1;Parent=gene-RM672_RS10730;Dbxref=GenBank:WP_103159155.1;Name=WP_103159155.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165722.1;locus_tag=RM672_RS10730;product=ornithine carbamoyltransferase;protein_id=WP_103159155.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 29896 31122 . - . ID=gene-RM672_RS10735;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=RM672_RS10735;old_locus_tag=RM672_10730 NZ_JAVRJS010000009.1 Protein Homology CDS 29896 31122 . - 0 ID=cds-WP_037576707.1;Parent=gene-RM672_RS10735;Dbxref=GenBank:WP_037576707.1;Name=WP_037576707.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175479.1;locus_tag=RM672_RS10735;product=arginine deiminase;protein_id=WP_037576707.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 31364 31822 . - . ID=gene-RM672_RS10740;Name=RM672_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10740;old_locus_tag=RM672_10735 NZ_JAVRJS010000009.1 Protein Homology CDS 31364 31822 . - 0 ID=cds-WP_037576704.1;Parent=gene-RM672_RS10740;Dbxref=GenBank:WP_037576704.1;Name=WP_037576704.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: protein motif:HMM:NF014864.7;locus_tag=RM672_RS10740;product=arginine repressor;protein_id=WP_037576704.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 32132 33301 . + . ID=gene-RM672_RS10745;Name=RM672_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10745;old_locus_tag=RM672_10740 NZ_JAVRJS010000009.1 Protein Homology CDS 32132 33301 . + 0 ID=cds-WP_037576700.1;Parent=gene-RM672_RS10745;Dbxref=GenBank:WP_037576700.1;Name=WP_037576700.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434998.1;locus_tag=RM672_RS10745;product=MFS transporter;protein_id=WP_037576700.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 33378 33488 . - . ID=gene-RM672_RS10750;Name=RM672_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10750;old_locus_tag=RM672_10745 NZ_JAVRJS010000009.1 Protein Homology CDS 33378 33488 . - 0 ID=cds-WP_069191690.1;Parent=gene-RM672_RS10750;Dbxref=GenBank:WP_069191690.1;Name=WP_069191690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468545.1;locus_tag=RM672_RS10750;product=SE2200 family small protein;protein_id=WP_069191690.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 33506 34999 . - . ID=gene-RM672_RS10755;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM672_RS10755;old_locus_tag=RM672_10750 NZ_JAVRJS010000009.1 Protein Homology CDS 33506 34999 . - 0 ID=cds-WP_037576697.1;Parent=gene-RM672_RS10755;Dbxref=GenBank:WP_037576697.1;Name=WP_037576697.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=RM672_RS10755;product=L-lactate dehydrogenase (quinone);protein_id=WP_037576697.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 35160 35660 . - . ID=gene-RM672_RS10760;Name=RM672_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10760;old_locus_tag=RM672_10755 NZ_JAVRJS010000009.1 Protein Homology CDS 35160 35660 . - 0 ID=cds-WP_037576695.1;Parent=gene-RM672_RS10760;Dbxref=GenBank:WP_037576695.1;Name=WP_037576695.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664111.1;locus_tag=RM672_RS10760;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_037576695.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 36038 37423 . - . ID=gene-RM672_RS10765;Name=RM672_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10765;old_locus_tag=RM672_10760 NZ_JAVRJS010000009.1 Protein Homology CDS 36038 37423 . - 0 ID=cds-WP_311541468.1;Parent=gene-RM672_RS10765;Dbxref=GenBank:WP_311541468.1;Name=WP_311541468.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471872.1;locus_tag=RM672_RS10765;product=amino acid permease;protein_id=WP_311541468.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 38019 38567 . + . ID=gene-RM672_RS10770;Name=RM672_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10770;old_locus_tag=RM672_10765 NZ_JAVRJS010000009.1 Protein Homology CDS 38019 38567 . + 0 ID=cds-WP_037576688.1;Parent=gene-RM672_RS10770;Dbxref=GenBank:WP_037576688.1;Name=WP_037576688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901526.1;locus_tag=RM672_RS10770;product=DUF4064 domain-containing protein;protein_id=WP_037576688.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 38669 39832 . + . ID=gene-RM672_RS10775;Name=RM672_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10775;old_locus_tag=RM672_10770 NZ_JAVRJS010000009.1 Protein Homology CDS 38669 39832 . + 0 ID=cds-WP_311541467.1;Parent=gene-RM672_RS10775;Dbxref=GenBank:WP_311541467.1;Name=WP_311541467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482272.1;locus_tag=RM672_RS10775;product=M20 family metallopeptidase;protein_id=WP_311541467.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 39928 40596 . + . ID=gene-RM672_RS10780;Name=RM672_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10780;old_locus_tag=RM672_10775 NZ_JAVRJS010000009.1 Protein Homology CDS 39928 40596 . + 0 ID=cds-WP_311541466.1;Parent=gene-RM672_RS10780;Dbxref=GenBank:WP_311541466.1;Name=WP_311541466.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466597.1;locus_tag=RM672_RS10780;product=response regulator transcription factor;protein_id=WP_311541466.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 40679 41587 . + . ID=gene-RM672_RS10785;Name=RM672_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10785;old_locus_tag=RM672_10780 NZ_JAVRJS010000009.1 Protein Homology CDS 40679 41587 . + 0 ID=cds-WP_311539390.1;Parent=gene-RM672_RS10785;Dbxref=GenBank:WP_311539390.1;Name=WP_311539390.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444826.1;locus_tag=RM672_RS10785;product=ABC transporter ATP-binding protein;protein_id=WP_311539390.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 41587 42336 . + . ID=gene-RM672_RS10790;Name=RM672_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10790;old_locus_tag=RM672_10785 NZ_JAVRJS010000009.1 GeneMarkS-2+ CDS 41587 42336 . + 0 ID=cds-WP_311539391.1;Parent=gene-RM672_RS10790;Dbxref=GenBank:WP_311539391.1;Name=WP_311539391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS10790;product=hypothetical protein;protein_id=WP_311539391.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 42359 43261 . + . ID=gene-RM672_RS10795;Name=RM672_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10795;old_locus_tag=RM672_10790 NZ_JAVRJS010000009.1 Protein Homology CDS 42359 43261 . + 0 ID=cds-WP_107367998.1;Parent=gene-RM672_RS10795;Dbxref=GenBank:WP_107367998.1;Name=WP_107367998.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025854.7;locus_tag=RM672_RS10795;product=sensor histidine kinase;protein_id=WP_107367998.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 43321 43758 . - . ID=gene-RM672_RS10800;Name=RM672_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10800;old_locus_tag=RM672_10795 NZ_JAVRJS010000009.1 Protein Homology CDS 43321 43758 . - 0 ID=cds-WP_311541465.1;Parent=gene-RM672_RS10800;Dbxref=GenBank:WP_311541465.1;Name=WP_311541465.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507130.1;locus_tag=RM672_RS10800;product=VOC family protein;protein_id=WP_311541465.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 43887 44552 . + . ID=gene-RM672_RS10805;Name=RM672_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10805;old_locus_tag=RM672_10800 NZ_JAVRJS010000009.1 Protein Homology CDS 43887 44552 . + 0 ID=cds-WP_037576682.1;Parent=gene-RM672_RS10805;Dbxref=GenBank:WP_037576682.1;Name=WP_037576682.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363890.1;locus_tag=RM672_RS10805;product=response regulator transcription factor;protein_id=WP_037576682.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 44581 45471 . + . ID=gene-RM672_RS10810;Name=RM672_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10810;old_locus_tag=RM672_10805 NZ_JAVRJS010000009.1 Protein Homology CDS 44581 45471 . + 0 ID=cds-WP_311541484.1;Parent=gene-RM672_RS10810;Dbxref=GenBank:WP_311541484.1;Name=WP_311541484.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492577.1;locus_tag=RM672_RS10810;product=sensor histidine kinase;protein_id=WP_311541484.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 45561 46310 . + . ID=gene-RM672_RS10815;Name=RM672_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10815;old_locus_tag=RM672_10810 NZ_JAVRJS010000009.1 Protein Homology CDS 45561 46310 . + 0 ID=cds-WP_311541464.1;Parent=gene-RM672_RS10815;Dbxref=GenBank:WP_311541464.1;Name=WP_311541464.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382394.1;locus_tag=RM672_RS10815;product=ABC transporter ATP-binding protein;protein_id=WP_311541464.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 46312 48294 . + . ID=gene-RM672_RS10820;Name=RM672_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10820;old_locus_tag=RM672_10815 NZ_JAVRJS010000009.1 Protein Homology CDS 46312 48294 . + 0 ID=cds-WP_311541463.1;Parent=gene-RM672_RS10820;Dbxref=GenBank:WP_311541463.1;Name=WP_311541463.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.8;locus_tag=RM672_RS10820;product=ABC transporter permease;protein_id=WP_311541463.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 48340 48966 . - . ID=gene-RM672_RS10825;Name=RM672_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10825;old_locus_tag=RM672_10820 NZ_JAVRJS010000009.1 Protein Homology CDS 48340 48966 . - 0 ID=cds-WP_037576676.1;Parent=gene-RM672_RS10825;Dbxref=GenBank:WP_037576676.1;Name=WP_037576676.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=RM672_RS10825;product=FMN-dependent NADH-azoreductase;protein_id=WP_037576676.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 49202 49522 . - . ID=gene-RM672_RS10830;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=RM672_RS10830;old_locus_tag=RM672_10825 NZ_JAVRJS010000009.1 Protein Homology CDS 49202 49522 . - 0 ID=cds-WP_311541462.1;Parent=gene-RM672_RS10830;Dbxref=GenBank:WP_311541462.1;Name=WP_311541462.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166845.1;locus_tag=RM672_RS10830;product=SPIN family peroxidase inhibitor;protein_id=WP_311541462.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 50410 51993 . + . ID=gene-RM672_RS10835;Name=mbcS;gbkey=Gene;gene=mbcS;gene_biotype=protein_coding;locus_tag=RM672_RS10835;old_locus_tag=RM672_10830 NZ_JAVRJS010000009.1 Protein Homology CDS 50410 51993 . + 0 ID=cds-WP_037576671.1;Parent=gene-RM672_RS10835;Dbxref=GenBank:WP_037576671.1;Name=WP_037576671.1;gbkey=CDS;gene=mbcS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505544.1;locus_tag=RM672_RS10835;product=acyl-CoA synthetase MbcS;protein_id=WP_037576671.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 52515 52613 . - . ID=gene-RM672_RS11465;Name=RM672_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS11465 NZ_JAVRJS010000009.1 GeneMarkS-2+ CDS 52515 52613 . - 0 ID=cds-WP_325050623.1;Parent=gene-RM672_RS11465;Dbxref=GenBank:WP_325050623.1;Name=WP_325050623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS11465;product=NAD(P)-binding protein;protein_id=WP_325050623.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq pseudogene 52951 53592 . + . ID=gene-RM672_RS10840;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=pseudogene;locus_tag=RM672_RS10840;old_locus_tag=RM672_10835;pseudo=true NZ_JAVRJS010000009.1 Protein Homology CDS 52951 53592 . + 0 ID=cds-RM672_RS10840;Parent=gene-RM672_RS10840;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016129688.1;locus_tag=RM672_RS10840;product=isochorismate family cysteine hydrolase YcaC;pseudo=true;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 53679 54101 . - . ID=gene-RM672_RS10845;Name=RM672_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10845;old_locus_tag=RM672_10840 NZ_JAVRJS010000009.1 Protein Homology CDS 53679 54101 . - 0 ID=cds-WP_037576664.1;Parent=gene-RM672_RS10845;Dbxref=GenBank:WP_037576664.1;Name=WP_037576664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=RM672_RS10845;product=Hsp20/alpha crystallin family protein;protein_id=WP_037576664.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq direct_repeat 54340 54837 . + . ID=id-NZ_JAVRJS010000009.1:54340..54837;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=54340..54375;rpt_unit_seq=gttttagtactctgtaattttaggtataagtgattc NZ_JAVRJS010000009.1 RefSeq gene 55113 58280 . + . ID=gene-RM672_RS10850;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=RM672_RS10850;old_locus_tag=RM672_10845 NZ_JAVRJS010000009.1 Protein Homology CDS 55113 58280 . + 0 ID=cds-WP_311541461.1;Parent=gene-RM672_RS10850;Dbxref=GenBank:WP_311541461.1;Name=WP_311541461.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460848.1;locus_tag=RM672_RS10850;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_311541461.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 58280 59182 . + . ID=gene-RM672_RS10855;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=RM672_RS10855;old_locus_tag=RM672_10850 NZ_JAVRJS010000009.1 Protein Homology CDS 58280 59182 . + 0 ID=cds-WP_107372122.1;Parent=gene-RM672_RS10855;Dbxref=GenBank:WP_107372122.1;Name=WP_107372122.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460847.1;locus_tag=RM672_RS10855;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_107372122.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 59187 59495 . + . ID=gene-RM672_RS10860;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=RM672_RS10860;old_locus_tag=RM672_10855 NZ_JAVRJS010000009.1 Protein Homology CDS 59187 59495 . + 0 ID=cds-WP_107366678.1;Parent=gene-RM672_RS10860;Dbxref=GenBank:WP_107366678.1;Name=WP_107366678.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382352.1;locus_tag=RM672_RS10860;product=CRISPR-associated endonuclease Cas2;protein_id=WP_107366678.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 59509 60513 . + . ID=gene-RM672_RS10865;Name=RM672_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10865;old_locus_tag=RM672_10860 NZ_JAVRJS010000009.1 Protein Homology CDS 59509 60513 . + 0 ID=cds-WP_311541460.1;Parent=gene-RM672_RS10865;Dbxref=GenBank:WP_311541460.1;Name=WP_311541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460845.1;locus_tag=RM672_RS10865;product=hypothetical protein;protein_id=WP_311541460.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 60790 62112 . - . ID=gene-RM672_RS10870;Name=RM672_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10870;old_locus_tag=RM672_10865 NZ_JAVRJS010000009.1 Protein Homology CDS 60790 62112 . - 0 ID=cds-WP_311541459.1;Parent=gene-RM672_RS10870;Dbxref=GenBank:WP_311541459.1;Name=WP_311541459.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498867.1;locus_tag=RM672_RS10870;product=Nramp family divalent metal transporter;protein_id=WP_311541459.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 62364 63056 . + . ID=gene-RM672_RS10875;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=RM672_RS10875;old_locus_tag=RM672_10870 NZ_JAVRJS010000009.1 Protein Homology CDS 62364 63056 . + 0 ID=cds-WP_105963004.1;Parent=gene-RM672_RS10875;Dbxref=GenBank:WP_105963004.1;Name=WP_105963004.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=RM672_RS10875;product=dethiobiotin synthase;protein_id=WP_105963004.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 63031 64380 . + . ID=gene-RM672_RS10880;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=RM672_RS10880;old_locus_tag=RM672_10875 NZ_JAVRJS010000009.1 Protein Homology CDS 63031 64380 . + 0 ID=cds-WP_311541458.1;Parent=gene-RM672_RS10880;Dbxref=GenBank:WP_311541458.1;Name=WP_311541458.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=RM672_RS10880;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_311541458.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 64382 65494 . + . ID=gene-RM672_RS10885;Name=RM672_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10885;old_locus_tag=RM672_10880 NZ_JAVRJS010000009.1 Protein Homology CDS 64382 65494 . + 0 ID=cds-WP_311539401.1;Parent=gene-RM672_RS10885;Dbxref=GenBank:WP_311539401.1;Name=WP_311539401.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219974.1;locus_tag=RM672_RS10885;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311539401.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 65487 66167 . + . ID=gene-RM672_RS10890;Name=RM672_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10890;old_locus_tag=RM672_10885 NZ_JAVRJS010000009.1 Protein Homology CDS 65487 66167 . + 0 ID=cds-WP_103159538.1;Parent=gene-RM672_RS10890;Dbxref=GenBank:WP_103159538.1;Name=WP_103159538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723561.1;locus_tag=RM672_RS10890;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_103159538.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 66214 67806 . - . ID=gene-RM672_RS10895;Name=RM672_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10895;old_locus_tag=RM672_10890 NZ_JAVRJS010000009.1 Protein Homology CDS 66214 67806 . - 0 ID=cds-WP_311542506.1;Parent=gene-RM672_RS10895;Dbxref=GenBank:WP_311542506.1;Name=WP_311542506.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506551.1;locus_tag=RM672_RS10895;product=L-lactate permease;protein_id=WP_311542506.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq pseudogene 68793 68927 . + . ID=gene-RM672_RS11470;Name=RM672_RS11470;end_range=68927,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS11470;partial=true;pseudo=true NZ_JAVRJS010000009.1 Protein Homology CDS 68793 68927 . + 0 ID=cds-RM672_RS11470;Parent=gene-RM672_RS11470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=68927,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040237.6;locus_tag=RM672_RS11470;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJS010000009.1 RefSeq gene 69401 69547 . - . ID=gene-RM672_RS10900;Name=RM672_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM672_RS10900;old_locus_tag=RM672_10895 NZ_JAVRJS010000009.1 GeneMarkS-2+ CDS 69401 69547 . - 0 ID=cds-WP_172458421.1;Parent=gene-RM672_RS10900;Dbxref=GenBank:WP_172458421.1;Name=WP_172458421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS10900;product=hypothetical protein;protein_id=WP_172458421.1;transl_table=11 NZ_JAVRJS010000009.1 RefSeq pseudogene 70127 71377 . - . ID=gene-RM672_RS10905;Name=RM672_RS10905;end_range=71377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM672_RS10905;old_locus_tag=RM672_10900;partial=true;pseudo=true NZ_JAVRJS010000009.1 GeneMarkS-2+ CDS 70127 71377 . - 0 ID=cds-RM672_RS10905;Parent=gene-RM672_RS10905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=71377,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM672_RS10905;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ###