##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3184672v1 #!genome-build-accession NCBI_Assembly:GCF_031846725.1 #!annotation-date 09/26/2026 01:41:24 #!annotation-source NCBI RefSeq GCF_031846725.1-RS_2026_09_26 ##sequence-region NZ_JAVRJW010000010.1 1 43550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000010.1 RefSeq region 1 43550 . + . ID=NZ_JAVRJW010000010.1:1..43550;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000010.1 RefSeq pseudogene 1 338 . + . ID=gene-RM615_RS10280;Name=RM615_RS10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10280;old_locus_tag=RM615_10290;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJW010000010.1 Protein Homology CDS 1 338 . + 2 ID=cds-RM615_RS10280;Parent=gene-RM615_RS10280;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=RM615_RS10280;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 422 1237 . + . ID=gene-RM615_RS10285;Name=RM615_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10285;old_locus_tag=RM615_10295 NZ_JAVRJW010000010.1 Protein Homology CDS 422 1237 . + 0 ID=cds-WP_084276053.1;Parent=gene-RM615_RS10285;Dbxref=GenBank:WP_084276053.1;Name=WP_084276053.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=RM615_RS10285;product=SPL family radical SAM protein;protein_id=WP_084276053.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 1252 1776 . + . ID=gene-RM615_RS10290;Name=RM615_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10290;old_locus_tag=RM615_10300 NZ_JAVRJW010000010.1 Protein Homology CDS 1252 1776 . + 0 ID=cds-WP_103158752.1;Parent=gene-RM615_RS10290;Dbxref=GenBank:WP_103158752.1;Name=WP_103158752.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425564.1;locus_tag=RM615_RS10290;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_103158752.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 1906 2349 . - . ID=gene-RM615_RS10295;Name=RM615_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10295;old_locus_tag=RM615_10305 NZ_JAVRJW010000010.1 Protein Homology CDS 1906 2349 . - 0 ID=cds-WP_306823253.1;Parent=gene-RM615_RS10295;Dbxref=GenBank:WP_306823253.1;Name=WP_306823253.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468210.1;locus_tag=RM615_RS10295;product=ASCH domain-containing protein;protein_id=WP_306823253.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 2785 3291 . + . ID=gene-RM615_RS10300;Name=RM615_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10300;old_locus_tag=RM615_10310 NZ_JAVRJW010000010.1 Protein Homology CDS 2785 3291 . + 0 ID=cds-WP_037575683.1;Parent=gene-RM615_RS10300;Dbxref=GenBank:WP_037575683.1;Name=WP_037575683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459684.1;locus_tag=RM615_RS10300;product=YagU family protein;protein_id=WP_037575683.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 3773 4006 . - . ID=gene-RM615_RS10305;Name=RM615_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10305;old_locus_tag=RM615_10315 NZ_JAVRJW010000010.1 GeneMarkS-2+ CDS 3773 4006 . - 0 ID=cds-WP_311541147.1;Parent=gene-RM615_RS10305;Dbxref=GenBank:WP_311541147.1;Name=WP_311541147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10305;product=hypothetical protein;protein_id=WP_311541147.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 4369 4905 . - . ID=gene-RM615_RS10310;Name=RM615_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10310;old_locus_tag=RM615_10320 NZ_JAVRJW010000010.1 GeneMarkS-2+ CDS 4369 4905 . - 0 ID=cds-WP_311541148.1;Parent=gene-RM615_RS10310;Dbxref=GenBank:WP_311541148.1;Name=WP_311541148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10310;product=hypothetical protein;protein_id=WP_311541148.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 4930 6045 . - . ID=gene-RM615_RS10315;Name=RM615_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10315;old_locus_tag=RM615_10325 NZ_JAVRJW010000010.1 Protein Homology CDS 4930 6045 . - 0 ID=cds-WP_311541149.1;Parent=gene-RM615_RS10315;Dbxref=GenBank:WP_311541149.1;Name=WP_311541149.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01554.3;locus_tag=RM615_RS10315;product=phage major capsid protein;protein_id=WP_311541149.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 6133 6474 . - . ID=gene-RM615_RS10320;Name=RM615_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10320;old_locus_tag=RM615_10330 NZ_JAVRJW010000010.1 Protein Homology CDS 6133 6474 . - 0 ID=cds-WP_311541150.1;Parent=gene-RM615_RS10320;Dbxref=GenBank:WP_311541150.1;Name=WP_311541150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728774.1;locus_tag=RM615_RS10320;product=pathogenicity island protein;protein_id=WP_311541150.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 6745 8202 . - . ID=gene-RM615_RS10325;Name=RM615_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10325;old_locus_tag=RM615_10335 NZ_JAVRJW010000010.1 Protein Homology CDS 6745 8202 . - 0 ID=cds-WP_311541151.1;Parent=gene-RM615_RS10325;Dbxref=GenBank:WP_311541151.1;Name=WP_311541151.1;Ontology_term=GO:0004386,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468658.1;locus_tag=RM615_RS10325;product=virulence-associated E family protein;protein_id=WP_311541151.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 8218 9105 . - . ID=gene-RM615_RS10330;Name=RM615_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10330;old_locus_tag=RM615_10340 NZ_JAVRJW010000010.1 Protein Homology CDS 8218 9105 . - 0 ID=cds-WP_311541152.1;Parent=gene-RM615_RS10330;Dbxref=GenBank:WP_311541152.1;Name=WP_311541152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF057215.1;locus_tag=RM615_RS10330;product=primase alpha helix C-terminal domain-containing protein;protein_id=WP_311541152.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 9140 9445 . - . ID=gene-RM615_RS10335;Name=tscT;gbkey=Gene;gene=tscT;gene_biotype=protein_coding;locus_tag=RM615_RS10335;old_locus_tag=RM615_10345 NZ_JAVRJW010000010.1 Protein Homology CDS 9140 9445 . - 0 ID=cds-WP_311541153.1;Parent=gene-RM615_RS10335;Dbxref=GenBank:WP_311541153.1;Name=WP_311541153.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;gene=tscT;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103945.1;locus_tag=RM615_RS10335;product=type II toxin-antitoxin system toxin TscT;protein_id=WP_311541153.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 9448 9654 . - . ID=gene-RM615_RS10340;Name=tscA;gbkey=Gene;gene=tscA;gene_biotype=protein_coding;locus_tag=RM615_RS10340;old_locus_tag=RM615_10350 NZ_JAVRJW010000010.1 Protein Homology CDS 9448 9654 . - 0 ID=cds-WP_311541154.1;Parent=gene-RM615_RS10340;Dbxref=GenBank:WP_311541154.1;Name=WP_311541154.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tscA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728771.1;locus_tag=RM615_RS10340;product=type II toxin-antitoxin system antitoxin TscA;protein_id=WP_311541154.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 9656 9859 . - . ID=gene-RM615_RS10345;Name=RM615_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10345;old_locus_tag=RM615_10355 NZ_JAVRJW010000010.1 Protein Homology CDS 9656 9859 . - 0 ID=cds-WP_311541155.1;Parent=gene-RM615_RS10345;Dbxref=GenBank:WP_311541155.1;Name=WP_311541155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231389.1;locus_tag=RM615_RS10345;product=pathogenicity island protein;protein_id=WP_311541155.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 9856 10161 . - . ID=gene-RM615_RS10350;Name=RM615_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10350;old_locus_tag=RM615_10360 NZ_JAVRJW010000010.1 Protein Homology CDS 9856 10161 . - 0 ID=cds-WP_311541156.1;Parent=gene-RM615_RS10350;Dbxref=GenBank:WP_311541156.1;Name=WP_311541156.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511382.1;locus_tag=RM615_RS10350;product=helix-turn-helix domain-containing protein;protein_id=WP_311541156.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 10165 10380 . - . ID=gene-RM615_RS10355;Name=RM615_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10355;old_locus_tag=RM615_10365 NZ_JAVRJW010000010.1 Protein Homology CDS 10165 10380 . - 0 ID=cds-WP_311541157.1;Parent=gene-RM615_RS10355;Dbxref=GenBank:WP_311541157.1;Name=WP_311541157.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794315.1;locus_tag=RM615_RS10355;product=helix-turn-helix domain-containing protein;protein_id=WP_311541157.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 10552 11187 . + . ID=gene-RM615_RS10360;Name=RM615_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10360;old_locus_tag=RM615_10370 NZ_JAVRJW010000010.1 Protein Homology CDS 10552 11187 . + 0 ID=cds-WP_311541159.1;Parent=gene-RM615_RS10360;Dbxref=GenBank:WP_311541159.1;Name=WP_311541159.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616253.1;locus_tag=RM615_RS10360;product=helix-turn-helix domain-containing protein;protein_id=WP_311541159.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 11197 12366 . + . ID=gene-RM615_RS10365;Name=RM615_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10365;old_locus_tag=RM615_10375 NZ_JAVRJW010000010.1 Protein Homology CDS 11197 12366 . + 0 ID=cds-WP_311541160.1;Parent=gene-RM615_RS10365;Dbxref=GenBank:WP_311541160.1;Name=WP_311541160.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179352.1;locus_tag=RM615_RS10365;product=site-specific integrase;protein_id=WP_311541160.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 12435 14054 . - . ID=gene-RM615_RS10370;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=RM615_RS10370;old_locus_tag=RM615_10380 NZ_JAVRJW010000010.1 Protein Homology CDS 12435 14054 . - 0 ID=cds-WP_037575682.1;Parent=gene-RM615_RS10370;Dbxref=GenBank:WP_037575682.1;Name=WP_037575682.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=RM615_RS10370;product=chaperonin GroEL;protein_id=WP_037575682.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 14124 14411 . - . ID=gene-RM615_RS10375;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=RM615_RS10375;old_locus_tag=RM615_10385 NZ_JAVRJW010000010.1 Protein Homology CDS 14124 14411 . - 0 ID=cds-WP_037575681.1;Parent=gene-RM615_RS10375;Dbxref=GenBank:WP_037575681.1;Name=WP_037575681.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=RM615_RS10375;product=co-chaperone GroES;protein_id=WP_037575681.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 14581 15333 . + . ID=gene-RM615_RS10380;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=RM615_RS10380;old_locus_tag=RM615_10390 NZ_JAVRJW010000010.1 Protein Homology CDS 14581 15333 . + 0 ID=cds-WP_037575680.1;Parent=gene-RM615_RS10380;Dbxref=GenBank:WP_037575680.1;Name=WP_037575680.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425570.1;locus_tag=RM615_RS10380;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_037575680.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 15411 16571 . - . ID=gene-RM615_RS10385;Name=RM615_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10385;old_locus_tag=RM615_10395 NZ_JAVRJW010000010.1 Protein Homology CDS 15411 16571 . - 0 ID=cds-WP_107360669.1;Parent=gene-RM615_RS10385;Dbxref=GenBank:WP_107360669.1;Name=WP_107360669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039170.1;locus_tag=RM615_RS10385;product=SdrH family protein;protein_id=WP_107360669.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 16751 17548 . + . ID=gene-RM615_RS10390;Name=RM615_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10390;old_locus_tag=RM615_10400 NZ_JAVRJW010000010.1 Protein Homology CDS 16751 17548 . + 0 ID=cds-WP_037575679.1;Parent=gene-RM615_RS10390;Dbxref=GenBank:WP_037575679.1;Name=WP_037575679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=RM615_RS10390;product=carbon-nitrogen family hydrolase;protein_id=WP_037575679.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 18196 18759 . + . ID=gene-RM615_RS10395;Name=RM615_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10395;old_locus_tag=RM615_10405 NZ_JAVRJW010000010.1 Protein Homology CDS 18196 18759 . + 0 ID=cds-WP_105965756.1;Parent=gene-RM615_RS10395;Dbxref=GenBank:WP_105965756.1;Name=WP_105965756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275304.1;locus_tag=RM615_RS10395;product=accessory gene regulator AgrB;protein_id=WP_105965756.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 18763 18897 . + . ID=gene-RM615_RS10400;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=RM615_RS10400;old_locus_tag=RM615_10410 NZ_JAVRJW010000010.1 Protein Homology CDS 18763 18897 . + 0 ID=cds-WP_103159704.1;Parent=gene-RM615_RS10400;Dbxref=GenBank:WP_103159704.1;Name=WP_103159704.1;gbkey=CDS;gene=agrD;inference=COORDINATES: protein motif:HMM:TIGR04223.1;locus_tag=RM615_RS10400;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_103159704.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 18917 20224 . + . ID=gene-RM615_RS10405;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=RM615_RS10405;old_locus_tag=RM615_10415 NZ_JAVRJW010000010.1 Protein Homology CDS 18917 20224 . + 0 ID=cds-WP_368410996.1;Parent=gene-RM615_RS10405;Dbxref=GenBank:WP_368410996.1;Name=WP_368410996.1;gbkey=CDS;gene=agrC;inference=COORDINATES: protein motif:HMM:NF046015.1;locus_tag=RM615_RS10405;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_368410996.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 20239 20961 . + . ID=gene-RM615_RS10410;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=RM615_RS10410;old_locus_tag=RM615_10420 NZ_JAVRJW010000010.1 Protein Homology CDS 20239 20961 . + 0 ID=cds-WP_037575675.1;Parent=gene-RM615_RS10410;Dbxref=GenBank:WP_037575675.1;Name=WP_037575675.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=RM615_RS10410;product=quorum-sensing response regulator AgrA;protein_id=WP_037575675.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 21460 22944 . - . ID=gene-RM615_RS10415;Name=RM615_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10415;old_locus_tag=RM615_10425 NZ_JAVRJW010000010.1 Protein Homology CDS 21460 22944 . - 0 ID=cds-WP_311540493.1;Parent=gene-RM615_RS10415;Dbxref=GenBank:WP_311540493.1;Name=WP_311540493.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613916.1;locus_tag=RM615_RS10415;product=sucrose-6-phosphate hydrolase;protein_id=WP_311540493.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 23291 23515 . - . ID=gene-RM615_RS10420;Name=RM615_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10420;old_locus_tag=RM615_10430 NZ_JAVRJW010000010.1 Protein Homology CDS 23291 23515 . - 0 ID=cds-WP_037575670.1;Parent=gene-RM615_RS10420;Dbxref=GenBank:WP_037575670.1;Name=WP_037575670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=RM615_RS10420;product=sulfurtransferase TusA family protein;protein_id=WP_037575670.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 23537 24619 . - . ID=gene-RM615_RS10425;Name=RM615_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10425;old_locus_tag=RM615_10435 NZ_JAVRJW010000010.1 Protein Homology CDS 23537 24619 . - 0 ID=cds-WP_119513305.1;Parent=gene-RM615_RS10425;Dbxref=GenBank:WP_119513305.1;Name=WP_119513305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461425.1;locus_tag=RM615_RS10425;product=YeeE/YedE family protein;protein_id=WP_119513305.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 24791 25438 . - . ID=gene-RM615_RS10430;Name=RM615_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10430;old_locus_tag=RM615_10440 NZ_JAVRJW010000010.1 Protein Homology CDS 24791 25438 . - 0 ID=cds-WP_037575663.1;Parent=gene-RM615_RS10430;Dbxref=GenBank:WP_037575663.1;Name=WP_037575663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166397.1;locus_tag=RM615_RS10430;product=redox-sensing transcriptional repressor Rex;protein_id=WP_037575663.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 25724 27664 . + . ID=gene-RM615_RS10435;Name=RM615_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10435;old_locus_tag=RM615_10445 NZ_JAVRJW010000010.1 Protein Homology CDS 25724 27664 . + 0 ID=cds-WP_105965759.1;Parent=gene-RM615_RS10435;Dbxref=GenBank:WP_105965759.1;Name=WP_105965759.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425581.1;locus_tag=RM615_RS10435;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_105965759.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 28000 29622 . + . ID=gene-RM615_RS10440;Name=RM615_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10440;old_locus_tag=RM615_10450 NZ_JAVRJW010000010.1 Protein Homology CDS 28000 29622 . + 0 ID=cds-WP_037575656.1;Parent=gene-RM615_RS10440;Dbxref=GenBank:WP_037575656.1;Name=WP_037575656.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167548.1;locus_tag=RM615_RS10440;product=MutS-related protein;protein_id=WP_037575656.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 29644 30663 . - . ID=gene-RM615_RS10445;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=RM615_RS10445;old_locus_tag=RM615_10455 NZ_JAVRJW010000010.1 Protein Homology CDS 29644 30663 . - 0 ID=cds-WP_311541161.1;Parent=gene-RM615_RS10445;Dbxref=GenBank:WP_311541161.1;Name=WP_311541161.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=RM615_RS10445;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_311541161.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 30660 31082 . - . ID=gene-RM615_RS10450;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=RM615_RS10450;old_locus_tag=RM615_10460 NZ_JAVRJW010000010.1 Protein Homology CDS 30660 31082 . - 0 ID=cds-WP_375713007.1;Parent=gene-RM615_RS10450;Dbxref=GenBank:WP_375713007.1;Name=WP_375713007.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466250.1;locus_tag=RM615_RS10450;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_375713007.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 31094 31759 . - . ID=gene-RM615_RS10455;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=RM615_RS10455;old_locus_tag=RM615_10465 NZ_JAVRJW010000010.1 Protein Homology CDS 31094 31759 . - 0 ID=cds-WP_037575648.1;Parent=gene-RM615_RS10455;Dbxref=GenBank:WP_037575648.1;Name=WP_037575648.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050718.1;locus_tag=RM615_RS10455;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_037575648.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 31752 32201 . - . ID=gene-RM615_RS10460;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=RM615_RS10460;old_locus_tag=RM615_10470 NZ_JAVRJW010000010.1 Protein Homology CDS 31752 32201 . - 0 ID=cds-WP_037575645.1;Parent=gene-RM615_RS10460;Dbxref=GenBank:WP_037575645.1;Name=WP_037575645.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590797.1;locus_tag=RM615_RS10460;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_037575645.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 32622 34310 . + . ID=gene-RM615_RS10465;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=RM615_RS10465;old_locus_tag=RM615_10475 NZ_JAVRJW010000010.1 Protein Homology CDS 32622 34310 . + 0 ID=cds-WP_037575643.1;Parent=gene-RM615_RS10465;Dbxref=GenBank:WP_037575643.1;Name=WP_037575643.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=RM615_RS10465;product=dihydroxy-acid dehydratase;protein_id=WP_037575643.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 34328 36082 . + . ID=gene-RM615_RS10470;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=RM615_RS10470;old_locus_tag=RM615_10480 NZ_JAVRJW010000010.1 Protein Homology CDS 34328 36082 . + 0 ID=cds-WP_311539545.1;Parent=gene-RM615_RS10470;Dbxref=GenBank:WP_311539545.1;Name=WP_311539545.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275287.1;locus_tag=RM615_RS10470;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_311539545.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 36079 36552 . + . ID=gene-RM615_RS10475;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=RM615_RS10475;old_locus_tag=RM615_10485 NZ_JAVRJW010000010.1 Protein Homology CDS 36079 36552 . + 0 ID=cds-WP_037575637.1;Parent=gene-RM615_RS10475;Dbxref=GenBank:WP_037575637.1;Name=WP_037575637.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=RM615_RS10475;product=acetolactate synthase small subunit;protein_id=WP_037575637.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 36571 37590 . + . ID=gene-RM615_RS10480;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=RM615_RS10480;old_locus_tag=RM615_10490 NZ_JAVRJW010000010.1 Protein Homology CDS 36571 37590 . + 0 ID=cds-WP_311539544.1;Parent=gene-RM615_RS10480;Dbxref=GenBank:WP_311539544.1;Name=WP_311539544.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825891.1;locus_tag=RM615_RS10480;product=ketol-acid reductoisomerase;protein_id=WP_311539544.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 37623 39158 . + . ID=gene-RM615_RS10485;Name=RM615_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10485;old_locus_tag=RM615_10495 NZ_JAVRJW010000010.1 Protein Homology CDS 37623 39158 . + 0 ID=cds-WP_311539543.1;Parent=gene-RM615_RS10485;Dbxref=GenBank:WP_311539543.1;Name=WP_311539543.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275284.1;locus_tag=RM615_RS10485;product=2-isopropylmalate synthase;protein_id=WP_311539543.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 39155 40204 . + . ID=gene-RM615_RS10490;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=RM615_RS10490;old_locus_tag=RM615_10500 NZ_JAVRJW010000010.1 Protein Homology CDS 39155 40204 . + 0 ID=cds-WP_311539542.1;Parent=gene-RM615_RS10490;Dbxref=GenBank:WP_311539542.1;Name=WP_311539542.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=RM615_RS10490;product=3-isopropylmalate dehydrogenase;protein_id=WP_311539542.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 40208 41578 . + . ID=gene-RM615_RS10495;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=RM615_RS10495;old_locus_tag=RM615_10505 NZ_JAVRJW010000010.1 Protein Homology CDS 40208 41578 . + 0 ID=cds-WP_037575626.1;Parent=gene-RM615_RS10495;Dbxref=GenBank:WP_037575626.1;Name=WP_037575626.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384293.1;locus_tag=RM615_RS10495;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_037575626.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 41580 42152 . + . ID=gene-RM615_RS10500;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=RM615_RS10500;old_locus_tag=RM615_10510 NZ_JAVRJW010000010.1 Protein Homology CDS 41580 42152 . + 0 ID=cds-WP_311539541.1;Parent=gene-RM615_RS10500;Dbxref=GenBank:WP_311539541.1;Name=WP_311539541.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384295.1;locus_tag=RM615_RS10500;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_311539541.1;transl_table=11 NZ_JAVRJW010000010.1 RefSeq gene 42166 43434 . + . ID=gene-RM615_RS10505;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=RM615_RS10505;old_locus_tag=RM615_10515 NZ_JAVRJW010000010.1 Protein Homology CDS 42166 43434 . + 0 ID=cds-WP_311539540.1;Parent=gene-RM615_RS10505;Dbxref=GenBank:WP_311539540.1;Name=WP_311539540.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466255.1;locus_tag=RM615_RS10505;product=threonine ammonia-lyase IlvA;protein_id=WP_311539540.1;transl_table=11 ##sequence-region NZ_JAVRJW010000011.1 1 38451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000011.1 RefSeq region 1 38451 . + . ID=NZ_JAVRJW010000011.1:1..38451;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000011.1 RefSeq gene 270 461 . - . ID=gene-RM615_RS10510;Name=RM615_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10510;old_locus_tag=RM615_10520 NZ_JAVRJW010000011.1 Protein Homology CDS 270 461 . - 0 ID=cds-WP_105963472.1;Parent=gene-RM615_RS10510;Dbxref=GenBank:WP_105963472.1;Name=WP_105963472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502694.1;locus_tag=RM615_RS10510;product=hypothetical protein;protein_id=WP_105963472.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 604 1944 . + . ID=gene-RM615_RS10515;Name=RM615_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10515;old_locus_tag=RM615_10525 NZ_JAVRJW010000011.1 Protein Homology CDS 604 1944 . + 0 ID=cds-WP_311541163.1;Parent=gene-RM615_RS10515;Dbxref=GenBank:WP_311541163.1;Name=WP_311541163.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001644634.1;locus_tag=RM615_RS10515;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_311541163.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 1946 2566 . + . ID=gene-RM615_RS10520;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=RM615_RS10520;old_locus_tag=RM615_10530 NZ_JAVRJW010000011.1 Protein Homology CDS 1946 2566 . + 0 ID=cds-WP_037577060.1;Parent=gene-RM615_RS10520;Dbxref=GenBank:WP_037577060.1;Name=WP_037577060.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481884.1;locus_tag=RM615_RS10520;product=dTMP kinase;protein_id=WP_037577060.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 2707 3036 . + . ID=gene-RM615_RS10525;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=RM615_RS10525;old_locus_tag=RM615_10535 NZ_JAVRJW010000011.1 Protein Homology CDS 2707 3036 . + 0 ID=cds-WP_037577055.1;Parent=gene-RM615_RS10525;Dbxref=GenBank:WP_037577055.1;Name=WP_037577055.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=RM615_RS10525;product=cyclic di-AMP receptor DarA;protein_id=WP_037577055.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 3208 4137 . + . ID=gene-RM615_RS10530;Name=RM615_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10530;old_locus_tag=RM615_10540 NZ_JAVRJW010000011.1 Protein Homology CDS 3208 4137 . + 0 ID=cds-WP_311541164.1;Parent=gene-RM615_RS10530;Dbxref=GenBank:WP_311541164.1;Name=WP_311541164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=RM615_RS10530;product=DNA polymerase III delta subunit-related protein;protein_id=WP_311541164.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 4143 4946 . + . ID=gene-RM615_RS10535;Name=RM615_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10535;old_locus_tag=RM615_10545 NZ_JAVRJW010000011.1 Protein Homology CDS 4143 4946 . + 0 ID=cds-WP_037577045.1;Parent=gene-RM615_RS10535;Dbxref=GenBank:WP_037577045.1;Name=WP_037577045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=RM615_RS10535;product=PSP1 domain-containing protein;protein_id=WP_037577045.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 4960 5313 . + . ID=gene-RM615_RS10540;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=RM615_RS10540;old_locus_tag=RM615_10550 NZ_JAVRJW010000011.1 Protein Homology CDS 4960 5313 . + 0 ID=cds-WP_037577040.1;Parent=gene-RM615_RS10540;Dbxref=GenBank:WP_037577040.1;Name=WP_037577040.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426526.1;locus_tag=RM615_RS10540;product=DNA replication initiation control protein YabA;protein_id=WP_037577040.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 5353 6078 . + . ID=gene-RM615_RS10545;Name=RM615_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10545;old_locus_tag=RM615_10555 NZ_JAVRJW010000011.1 Protein Homology CDS 5353 6078 . + 0 ID=cds-WP_103159377.1;Parent=gene-RM615_RS10545;Dbxref=GenBank:WP_103159377.1;Name=WP_103159377.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=RM615_RS10545;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_103159377.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 6071 6325 . + . ID=gene-RM615_RS10550;Name=RM615_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10550;old_locus_tag=RM615_10560 NZ_JAVRJW010000011.1 Protein Homology CDS 6071 6325 . + 0 ID=cds-WP_037577030.1;Parent=gene-RM615_RS10550;Dbxref=GenBank:WP_037577030.1;Name=WP_037577030.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384549.1;locus_tag=RM615_RS10550;product=GIY-YIG nuclease family protein;protein_id=WP_037577030.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 6322 7158 . + . ID=gene-RM615_RS10555;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=RM615_RS10555;old_locus_tag=RM615_10565 NZ_JAVRJW010000011.1 Protein Homology CDS 6322 7158 . + 0 ID=cds-WP_037577026.1;Parent=gene-RM615_RS10555;Dbxref=GenBank:WP_037577026.1;Name=WP_037577026.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509790.1;locus_tag=RM615_RS10555;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_037577026.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 7255 9222 . + . ID=gene-RM615_RS10560;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=RM615_RS10560;old_locus_tag=RM615_10570 NZ_JAVRJW010000011.1 Protein Homology CDS 7255 9222 . + 0 ID=cds-WP_037577021.1;Parent=gene-RM615_RS10560;Dbxref=GenBank:WP_037577021.1;Name=WP_037577021.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=RM615_RS10560;product=methionine--tRNA ligase;protein_id=WP_037577021.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 9344 10123 . + . ID=gene-RM615_RS10565;Name=RM615_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10565;old_locus_tag=RM615_10575 NZ_JAVRJW010000011.1 Protein Homology CDS 9344 10123 . + 0 ID=cds-WP_105963478.1;Parent=gene-RM615_RS10565;Dbxref=GenBank:WP_105963478.1;Name=WP_105963478.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499041.1;locus_tag=RM615_RS10565;product=TatD family hydrolase;protein_id=WP_105963478.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 10141 10680 . + . ID=gene-RM615_RS10570;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=RM615_RS10570;old_locus_tag=RM615_10580 NZ_JAVRJW010000011.1 Protein Homology CDS 10141 10680 . + 0 ID=cds-WP_037577013.1;Parent=gene-RM615_RS10570;Dbxref=GenBank:WP_037577013.1;Name=WP_037577013.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=RM615_RS10570;product=ribonuclease M5;protein_id=WP_037577013.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 10688 11578 . + . ID=gene-RM615_RS10575;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=RM615_RS10575;old_locus_tag=RM615_10585 NZ_JAVRJW010000011.1 Protein Homology CDS 10688 11578 . + 0 ID=cds-WP_103159375.1;Parent=gene-RM615_RS10575;Dbxref=GenBank:WP_103159375.1;Name=WP_103159375.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=RM615_RS10575;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_103159375.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 11678 11944 . + . ID=gene-RM615_RS10580;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=RM615_RS10580;old_locus_tag=RM615_10590 NZ_JAVRJW010000011.1 Protein Homology CDS 11678 11944 . + 0 ID=cds-WP_105997009.1;Parent=gene-RM615_RS10580;Dbxref=GenBank:WP_105997009.1;Name=WP_105997009.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426518.1;locus_tag=RM615_RS10580;product=biofilm formation stimulator Veg;protein_id=WP_105997009.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 12186 13034 . + . ID=gene-RM615_RS10585;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=RM615_RS10585;old_locus_tag=RM615_10595 NZ_JAVRJW010000011.1 Protein Homology CDS 12186 13034 . + 0 ID=cds-WP_037577004.1;Parent=gene-RM615_RS10585;Dbxref=GenBank:WP_037577004.1;Name=WP_037577004.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=RM615_RS10585;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_037577004.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 13057 13884 . + . ID=gene-RM615_RS10590;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=RM615_RS10590;old_locus_tag=RM615_10600 NZ_JAVRJW010000011.1 Protein Homology CDS 13057 13884 . + 0 ID=cds-WP_037577001.1;Parent=gene-RM615_RS10590;Dbxref=GenBank:WP_037577001.1;Name=WP_037577001.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384564.1;locus_tag=RM615_RS10590;product=pur operon repressor;protein_id=WP_037577001.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 13902 14282 . + . ID=gene-RM615_RS10595;Name=RM615_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10595;old_locus_tag=RM615_10605 NZ_JAVRJW010000011.1 Protein Homology CDS 13902 14282 . + 0 ID=cds-WP_037576999.1;Parent=gene-RM615_RS10595;Dbxref=GenBank:WP_037576999.1;Name=WP_037576999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169426.1;locus_tag=RM615_RS10595;product=RidA family protein;protein_id=WP_037576999.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 14346 14660 . + . ID=gene-RM615_RS10600;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=RM615_RS10600;old_locus_tag=RM615_10610 NZ_JAVRJW010000011.1 Protein Homology CDS 14346 14660 . + 0 ID=cds-WP_037576996.1;Parent=gene-RM615_RS10600;Dbxref=GenBank:WP_037576996.1;Name=WP_037576996.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499048.1;locus_tag=RM615_RS10600;product=septation regulator SpoVG;protein_id=WP_037576996.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 14922 16289 . + . ID=gene-RM615_RS10605;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=RM615_RS10605;old_locus_tag=RM615_10615 NZ_JAVRJW010000011.1 Protein Homology CDS 14922 16289 . + 0 ID=cds-WP_105963480.1;Parent=gene-RM615_RS10605;Dbxref=GenBank:WP_105963480.1;Name=WP_105963480.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=RM615_RS10605;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_105963480.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 16365 17330 . + . ID=gene-RM615_RS10610;Name=RM615_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10610;old_locus_tag=RM615_10620 NZ_JAVRJW010000011.1 Protein Homology CDS 16365 17330 . + 0 ID=cds-WP_037576991.1;Parent=gene-RM615_RS10610;Dbxref=GenBank:WP_037576991.1;Name=WP_037576991.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=RM615_RS10610;product=ribose-phosphate diphosphokinase;protein_id=WP_037576991.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 17469 18143 . + . ID=gene-RM615_RS10615;Name=RM615_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10615;old_locus_tag=RM615_10625 NZ_JAVRJW010000011.1 Protein Homology CDS 17469 18143 . + 0 ID=cds-WP_103159372.1;Parent=gene-RM615_RS10615;Dbxref=GenBank:WP_103159372.1;Name=WP_103159372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465710.1;locus_tag=RM615_RS10615;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_103159372.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 18288 18854 . + . ID=gene-RM615_RS10620;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=RM615_RS10620;old_locus_tag=RM615_10630 NZ_JAVRJW010000011.1 Protein Homology CDS 18288 18854 . + 0 ID=cds-WP_037576985.1;Parent=gene-RM615_RS10620;Dbxref=GenBank:WP_037576985.1;Name=WP_037576985.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451736.1;locus_tag=RM615_RS10620;product=aminoacyl-tRNA hydrolase;protein_id=WP_037576985.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 18866 22366 . + . ID=gene-RM615_RS10625;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=RM615_RS10625;old_locus_tag=RM615_10635 NZ_JAVRJW010000011.1 Protein Homology CDS 18866 22366 . + 0 ID=cds-WP_371874994.1;Parent=gene-RM615_RS10625;Dbxref=GenBank:WP_371874994.1;Name=WP_371874994.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=RM615_RS10625;product=transcription-repair coupling factor;protein_id=WP_371874994.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 22356 23885 . + . ID=gene-RM615_RS10630;Name=RM615_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10630;old_locus_tag=RM615_10640 NZ_JAVRJW010000011.1 Protein Homology CDS 22356 23885 . + 0 ID=cds-WP_037576978.1;Parent=gene-RM615_RS10630;Dbxref=GenBank:WP_037576978.1;Name=WP_037576978.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=RM615_RS10630;product=polysaccharide biosynthesis protein;protein_id=WP_037576978.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 23882 25069 . + . ID=gene-RM615_RS10635;Name=RM615_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10635;old_locus_tag=RM615_10645 NZ_JAVRJW010000011.1 Protein Homology CDS 23882 25069 . + 0 ID=cds-WP_105963482.1;Parent=gene-RM615_RS10635;Dbxref=GenBank:WP_105963482.1;Name=WP_105963482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165012.1;locus_tag=RM615_RS10635;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_105963482.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 25056 25313 . + . ID=gene-RM615_RS10640;Name=RM615_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10640;old_locus_tag=RM615_10650 NZ_JAVRJW010000011.1 Protein Homology CDS 25056 25313 . + 0 ID=cds-WP_037576972.1;Parent=gene-RM615_RS10640;Dbxref=GenBank:WP_037576972.1;Name=WP_037576972.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436795.1;locus_tag=RM615_RS10640;product=RNA-binding S4 domain-containing protein;protein_id=WP_037576972.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 25338 25727 . + . ID=gene-RM615_RS10645;Name=RM615_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10645;old_locus_tag=RM615_10655 NZ_JAVRJW010000011.1 Protein Homology CDS 25338 25727 . + 0 ID=cds-WP_037576970.1;Parent=gene-RM615_RS10645;Dbxref=GenBank:WP_037576970.1;Name=WP_037576970.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303866.1;locus_tag=RM615_RS10645;product=FtsB family cell division protein;protein_id=WP_037576970.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 25947 26324 . + . ID=gene-RM615_RS10650;Name=RM615_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10650;old_locus_tag=RM615_10660 NZ_JAVRJW010000011.1 Protein Homology CDS 25947 26324 . + 0 ID=cds-WP_037576967.1;Parent=gene-RM615_RS10650;Dbxref=GenBank:WP_037576967.1;Name=WP_037576967.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=RM615_RS10650;product=S1 domain-containing RNA-binding protein;protein_id=WP_037576967.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 26394 27677 . + . ID=gene-RM615_RS10655;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=RM615_RS10655;old_locus_tag=RM615_10665 NZ_JAVRJW010000011.1 Protein Homology CDS 26394 27677 . + 0 ID=cds-WP_103159368.1;Parent=gene-RM615_RS10655;Dbxref=GenBank:WP_103159368.1;Name=WP_103159368.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426503.1;locus_tag=RM615_RS10655;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_103159368.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 27667 28206 . + . ID=gene-RM615_RS10660;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=RM615_RS10660;old_locus_tag=RM615_10670 NZ_JAVRJW010000011.1 Protein Homology CDS 27667 28206 . + 0 ID=cds-WP_103159367.1;Parent=gene-RM615_RS10660;Dbxref=GenBank:WP_103159367.1;Name=WP_103159367.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176412.1;locus_tag=RM615_RS10660;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_103159367.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 28352 30496 . + . ID=gene-RM615_RS10665;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=RM615_RS10665;old_locus_tag=RM615_10675 NZ_JAVRJW010000011.1 Protein Homology CDS 28352 30496 . + 0 ID=cds-WP_103159366.1;Parent=gene-RM615_RS10665;Dbxref=GenBank:WP_103159366.1;Name=WP_103159366.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=RM615_RS10665;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_103159366.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 30641 31534 . + . ID=gene-RM615_RS10670;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=RM615_RS10670;old_locus_tag=RM615_10680 NZ_JAVRJW010000011.1 Protein Homology CDS 30641 31534 . + 0 ID=cds-WP_105963485.1;Parent=gene-RM615_RS10670;Dbxref=GenBank:WP_105963485.1;Name=WP_105963485.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484191.1;locus_tag=RM615_RS10670;product=Hsp33 family molecular chaperone HslO;protein_id=WP_105963485.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 31704 32633 . + . ID=gene-RM615_RS10675;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=RM615_RS10675;old_locus_tag=RM615_10685 NZ_JAVRJW010000011.1 Protein Homology CDS 31704 32633 . + 0 ID=cds-WP_311541165.1;Parent=gene-RM615_RS10675;Dbxref=GenBank:WP_311541165.1;Name=WP_311541165.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=RM615_RS10675;product=cysteine synthase A;protein_id=WP_311541165.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 32947 33738 . + . ID=gene-RM615_RS10680;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=RM615_RS10680;old_locus_tag=RM615_10690 NZ_JAVRJW010000011.1 Protein Homology CDS 32947 33738 . + 0 ID=cds-WP_311541166.1;Parent=gene-RM615_RS10680;Dbxref=GenBank:WP_311541166.1;Name=WP_311541166.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=RM615_RS10680;product=dihydropteroate synthase;protein_id=WP_311541166.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 33728 34099 . + . ID=gene-RM615_RS10685;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=RM615_RS10685;old_locus_tag=RM615_10695 NZ_JAVRJW010000011.1 Protein Homology CDS 33728 34099 . + 0 ID=cds-WP_037576943.1;Parent=gene-RM615_RS10685;Dbxref=GenBank:WP_037576943.1;Name=WP_037576943.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426497.1;locus_tag=RM615_RS10685;product=dihydroneopterin aldolase;protein_id=WP_037576943.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 34092 34571 . + . ID=gene-RM615_RS10690;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=RM615_RS10690;old_locus_tag=RM615_10700 NZ_JAVRJW010000011.1 Protein Homology CDS 34092 34571 . + 0 ID=cds-WP_107360562.1;Parent=gene-RM615_RS10690;Dbxref=GenBank:WP_107360562.1;Name=WP_107360562.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276746.1;locus_tag=RM615_RS10690;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_107360562.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 34653 35648 . + . ID=gene-RM615_RS10695;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=RM615_RS10695;old_locus_tag=RM615_10705 NZ_JAVRJW010000011.1 Protein Homology CDS 34653 35648 . + 0 ID=cds-WP_037576937.1;Parent=gene-RM615_RS10695;Dbxref=GenBank:WP_037576937.1;Name=WP_037576937.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=RM615_RS10695;product=tRNA dihydrouridine synthase DusB;protein_id=WP_037576937.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 35668 37155 . + . ID=gene-RM615_RS10700;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=RM615_RS10700;old_locus_tag=RM615_10710 NZ_JAVRJW010000011.1 Protein Homology CDS 35668 37155 . + 0 ID=cds-WP_037576935.1;Parent=gene-RM615_RS10700;Dbxref=GenBank:WP_037576935.1;Name=WP_037576935.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=RM615_RS10700;product=lysine--tRNA ligase;protein_id=WP_037576935.1;transl_table=11 NZ_JAVRJW010000011.1 RefSeq gene 37545 37659 . + . ID=gene-RM615_RS10705;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM615_RS10705;old_locus_tag=RM615_10715 NZ_JAVRJW010000011.1 cmsearch rRNA 37545 37659 . + . ID=rna-RM615_RS10705;Parent=gene-RM615_RS10705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS10705;product=5S ribosomal RNA NZ_JAVRJW010000011.1 cmsearch exon 37545 37659 . + . ID=exon-RM615_RS10705-1;Parent=rna-RM615_RS10705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS10705;product=5S ribosomal RNA NZ_JAVRJW010000011.1 RefSeq gene 37669 37744 . + . ID=gene-RM615_RS10710;Name=RM615_RS10710;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10710;old_locus_tag=RM615_10720 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 37669 37744 . + . ID=rna-RM615_RS10710;Parent=gene-RM615_RS10710;anticodon=(pos:37702..37704);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10710;product=tRNA-Val NZ_JAVRJW010000011.1 tRNAscan-SE exon 37669 37744 . + . ID=exon-RM615_RS10710-1;Parent=rna-RM615_RS10710;anticodon=(pos:37702..37704);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10710;product=tRNA-Val NZ_JAVRJW010000011.1 RefSeq gene 37752 37827 . + . ID=gene-RM615_RS10715;Name=RM615_RS10715;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10715;old_locus_tag=RM615_10725 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 37752 37827 . + . ID=rna-RM615_RS10715;Parent=gene-RM615_RS10715;anticodon=(pos:37785..37787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10715;product=tRNA-Thr NZ_JAVRJW010000011.1 tRNAscan-SE exon 37752 37827 . + . ID=exon-RM615_RS10715-1;Parent=rna-RM615_RS10715;anticodon=(pos:37785..37787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10715;product=tRNA-Thr NZ_JAVRJW010000011.1 RefSeq gene 37835 37907 . + . ID=gene-RM615_RS10720;Name=RM615_RS10720;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10720;old_locus_tag=RM615_10730 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 37835 37907 . + . ID=rna-RM615_RS10720;Parent=gene-RM615_RS10720;anticodon=(pos:37868..37870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10720;product=tRNA-Lys NZ_JAVRJW010000011.1 tRNAscan-SE exon 37835 37907 . + . ID=exon-RM615_RS10720-1;Parent=rna-RM615_RS10720;anticodon=(pos:37868..37870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10720;product=tRNA-Lys NZ_JAVRJW010000011.1 RefSeq gene 37926 38000 . + . ID=gene-RM615_RS10725;Name=RM615_RS10725;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10725;old_locus_tag=RM615_10735 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 37926 38000 . + . ID=rna-RM615_RS10725;Parent=gene-RM615_RS10725;anticodon=(pos:37958..37960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10725;product=tRNA-Gly NZ_JAVRJW010000011.1 tRNAscan-SE exon 37926 38000 . + . ID=exon-RM615_RS10725-1;Parent=rna-RM615_RS10725;anticodon=(pos:37958..37960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10725;product=tRNA-Gly NZ_JAVRJW010000011.1 RefSeq gene 38009 38097 . + . ID=gene-RM615_RS10730;Name=RM615_RS10730;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10730;old_locus_tag=RM615_10740 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 38009 38097 . + . ID=rna-RM615_RS10730;Parent=gene-RM615_RS10730;anticodon=(pos:38043..38045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10730;product=tRNA-Leu NZ_JAVRJW010000011.1 tRNAscan-SE exon 38009 38097 . + . ID=exon-RM615_RS10730-1;Parent=rna-RM615_RS10730;anticodon=(pos:38043..38045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10730;product=tRNA-Leu NZ_JAVRJW010000011.1 RefSeq gene 38107 38183 . + . ID=gene-RM615_RS10735;Name=RM615_RS10735;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10735;old_locus_tag=RM615_10745 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 38107 38183 . + . ID=rna-RM615_RS10735;Parent=gene-RM615_RS10735;anticodon=(pos:38141..38143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10735;product=tRNA-Arg NZ_JAVRJW010000011.1 tRNAscan-SE exon 38107 38183 . + . ID=exon-RM615_RS10735-1;Parent=rna-RM615_RS10735;anticodon=(pos:38141..38143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10735;product=tRNA-Arg NZ_JAVRJW010000011.1 RefSeq gene 38193 38266 . + . ID=gene-RM615_RS10740;Name=RM615_RS10740;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10740;old_locus_tag=RM615_10750 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 38193 38266 . + . ID=rna-RM615_RS10740;Parent=gene-RM615_RS10740;anticodon=(pos:38227..38229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10740;product=tRNA-Pro NZ_JAVRJW010000011.1 tRNAscan-SE exon 38193 38266 . + . ID=exon-RM615_RS10740-1;Parent=rna-RM615_RS10740;anticodon=(pos:38227..38229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10740;product=tRNA-Pro NZ_JAVRJW010000011.1 RefSeq gene 38286 38361 . + . ID=gene-RM615_RS10745;Name=RM615_RS10745;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10745;old_locus_tag=RM615_10755 NZ_JAVRJW010000011.1 tRNAscan-SE tRNA 38286 38361 . + . ID=rna-RM615_RS10745;Parent=gene-RM615_RS10745;anticodon=(pos:38319..38321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10745;product=tRNA-Ala NZ_JAVRJW010000011.1 tRNAscan-SE exon 38286 38361 . + . ID=exon-RM615_RS10745-1;Parent=rna-RM615_RS10745;anticodon=(pos:38319..38321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10745;product=tRNA-Ala ##sequence-region NZ_JAVRJW010000012.1 1 24971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000012.1 RefSeq region 1 24971 . + . ID=NZ_JAVRJW010000012.1:1..24971;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000012.1 RefSeq gene 242 742 . + . ID=gene-RM615_RS10750;Name=RM615_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10750;old_locus_tag=RM615_10760 NZ_JAVRJW010000012.1 GeneMarkS-2+ CDS 242 742 . + 0 ID=cds-WP_311541167.1;Parent=gene-RM615_RS10750;Dbxref=GenBank:WP_311541167.1;Name=WP_311541167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10750;product=hypothetical protein;protein_id=WP_311541167.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 768 977 . + . ID=gene-RM615_RS10755;Name=RM615_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10755 NZ_JAVRJW010000012.1 GeneMarkS-2+ CDS 768 977 . + 0 ID=cds-WP_311541168.1;Parent=gene-RM615_RS10755;Dbxref=GenBank:WP_311541168.1;Name=WP_311541168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10755;product=hypothetical protein;protein_id=WP_311541168.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 1162 1467 . - . ID=gene-RM615_RS10760;Name=RM615_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10760;old_locus_tag=RM615_10765 NZ_JAVRJW010000012.1 Protein Homology CDS 1162 1467 . - 0 ID=cds-WP_107378013.1;Parent=gene-RM615_RS10760;Dbxref=GenBank:WP_107378013.1;Name=WP_107378013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490323.1;locus_tag=RM615_RS10760;product=hypothetical protein;protein_id=WP_107378013.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 1755 2738 . - . ID=gene-RM615_RS10765;Name=RM615_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10765;old_locus_tag=RM615_10770 NZ_JAVRJW010000012.1 Protein Homology CDS 1755 2738 . - 0 ID=cds-WP_311541169.1;Parent=gene-RM615_RS10765;Dbxref=GenBank:WP_311541169.1;Name=WP_311541169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471380.1;locus_tag=RM615_RS10765;product=replication initiator protein A;protein_id=WP_311541169.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 3400 4296 . + . ID=gene-RM615_RS10770;Name=RM615_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10770;old_locus_tag=RM615_10775 NZ_JAVRJW010000012.1 Protein Homology CDS 3400 4296 . + 0 ID=cds-WP_311541170.1;Parent=gene-RM615_RS10770;Dbxref=GenBank:WP_311541170.1;Name=WP_311541170.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167418.1;locus_tag=RM615_RS10770;product=ParA family protein;protein_id=WP_311541170.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 4289 4603 . + . ID=gene-RM615_RS10775;Name=RM615_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10775;old_locus_tag=RM615_10780 NZ_JAVRJW010000012.1 Protein Homology CDS 4289 4603 . + 0 ID=cds-WP_311541171.1;Parent=gene-RM615_RS10775;Dbxref=GenBank:WP_311541171.1;Name=WP_311541171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167417.1;locus_tag=RM615_RS10775;product=hypothetical protein;protein_id=WP_311541171.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 4925 5179 . + . ID=gene-RM615_RS10780;Name=RM615_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10780;old_locus_tag=RM615_10785 NZ_JAVRJW010000012.1 GeneMarkS-2+ CDS 4925 5179 . + 0 ID=cds-WP_252594875.1;Parent=gene-RM615_RS10780;Dbxref=GenBank:WP_252594875.1;Name=WP_252594875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10780;product=hypothetical protein;protein_id=WP_252594875.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 5239 6075 . + . ID=gene-RM615_RS10785;Name=RM615_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10785;old_locus_tag=RM615_10790 NZ_JAVRJW010000012.1 Protein Homology CDS 5239 6075 . + 0 ID=cds-WP_252594877.1;Parent=gene-RM615_RS10785;Dbxref=GenBank:WP_252594877.1;Name=WP_252594877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528718.1;locus_tag=RM615_RS10785;product=DUF5677 domain-containing protein;protein_id=WP_252594877.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 6114 6269 . + . ID=gene-RM615_RS10790;Name=RM615_RS10790;end_range=6269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10790;old_locus_tag=RM615_10795;partial=true;pseudo=true;start_range=.,6114 NZ_JAVRJW010000012.1 Protein Homology CDS 6114 6269 . + 0 ID=cds-RM615_RS10790;Parent=gene-RM615_RS10790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=RM615_RS10790;partial=true;product=recombinase family protein;pseudo=true;start_range=.,6114;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 6262 6375 . - . ID=gene-RM615_RS10795;Name=RM615_RS10795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10795;old_locus_tag=RM615_10800;partial=true;pseudo=true;start_range=.,6262 NZ_JAVRJW010000012.1 Protein Homology CDS 6262 6375 . - 0 ID=cds-RM615_RS10795;Parent=gene-RM615_RS10795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105984.1;locus_tag=RM615_RS10795;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,6262;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 6732 8006 . + . ID=gene-RM615_RS10800;Name=RM615_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10800;old_locus_tag=RM615_10805 NZ_JAVRJW010000012.1 Protein Homology CDS 6732 8006 . + 0 ID=cds-WP_311541172.1;Parent=gene-RM615_RS10800;Dbxref=GenBank:WP_311541172.1;Name=WP_311541172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=RM615_RS10800;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_311541172.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 8028 9245 . + . ID=gene-RM615_RS10805;Name=RM615_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10805;old_locus_tag=RM615_10810 NZ_JAVRJW010000012.1 Protein Homology CDS 8028 9245 . + 0 ID=cds-WP_311541173.1;Parent=gene-RM615_RS10805;Dbxref=GenBank:WP_311541173.1;Name=WP_311541173.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM615_RS10805;product=MFS transporter;protein_id=WP_311541173.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 9249 9707 . + . ID=gene-RM615_RS10810;Name=RM615_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10810;old_locus_tag=RM615_10815 NZ_JAVRJW010000012.1 Protein Homology CDS 9249 9707 . + 0 ID=cds-WP_252594884.1;Parent=gene-RM615_RS10810;Dbxref=GenBank:WP_252594884.1;Name=WP_252594884.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM615_RS10810;product=GNAT family N-acetyltransferase;protein_id=WP_252594884.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 10260 11462 . - . ID=gene-RM615_RS10815;Name=RM615_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10815;old_locus_tag=RM615_10820 NZ_JAVRJW010000012.1 Protein Homology CDS 10260 11462 . - 0 ID=cds-WP_311541174.1;Parent=gene-RM615_RS10815;Dbxref=GenBank:WP_311541174.1;Name=WP_311541174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465840.1;locus_tag=RM615_RS10815;product=MFS transporter;protein_id=WP_311541174.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 11728 12606 . + . ID=gene-RM615_RS10820;Name=RM615_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10820;old_locus_tag=RM615_10825 NZ_JAVRJW010000012.1 Protein Homology CDS 11728 12606 . + 0 ID=cds-WP_311541175.1;Parent=gene-RM615_RS10820;Dbxref=GenBank:WP_311541175.1;Name=WP_311541175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04267.2;locus_tag=RM615_RS10820;product=aKG-HExxH-type peptide beta-hydroxylase;protein_id=WP_311541175.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 12672 13346 . - . ID=gene-RM615_RS10825;Name=RM615_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10825;old_locus_tag=RM615_10830 NZ_JAVRJW010000012.1 Protein Homology CDS 12672 13346 . - 0 ID=cds-WP_311541176.1;Parent=gene-RM615_RS10825;Dbxref=GenBank:WP_311541176.1;Name=WP_311541176.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM615_RS10825;product=IS6 family transposase;protein_id=WP_311541176.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 13382 13966 . - . ID=gene-RM615_RS10830;Name=RM615_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10830;old_locus_tag=RM615_10835 NZ_JAVRJW010000012.1 Protein Homology CDS 13382 13966 . - 0 ID=cds-WP_311541177.1;Parent=gene-RM615_RS10830;Dbxref=GenBank:WP_311541177.1;Name=WP_311541177.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504693.1;locus_tag=RM615_RS10830;product=recombinase family protein;protein_id=WP_311541177.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 14364 14831 . + . ID=gene-RM615_RS10835;Name=RM615_RS10835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10835;old_locus_tag=RM615_10840;partial=true;pseudo=true;start_range=.,14364 NZ_JAVRJW010000012.1 Protein Homology CDS 14364 14831 . + 0 ID=cds-RM615_RS10835;Parent=gene-RM615_RS10835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635265.1;locus_tag=RM615_RS10835;partial=true;product=recombinase family protein;pseudo=true;start_range=.,14364;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 14908 15207 . + . ID=gene-RM615_RS10840;Name=RM615_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10840;old_locus_tag=RM615_10845 NZ_JAVRJW010000012.1 GeneMarkS-2+ CDS 14908 15207 . + 0 ID=cds-WP_311541178.1;Parent=gene-RM615_RS10840;Dbxref=GenBank:WP_311541178.1;Name=WP_311541178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10840;product=hypothetical protein;protein_id=WP_311541178.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 15280 15516 . - . ID=gene-RM615_RS11245;Name=RM615_RS11245;end_range=15516,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11245;partial=true;pseudo=true NZ_JAVRJW010000012.1 Protein Homology CDS 15280 15516 . - 0 ID=cds-RM615_RS11245;Parent=gene-RM615_RS11245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729285.1;locus_tag=RM615_RS11245;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 15636 16001 . - . ID=gene-RM615_RS11215;Name=RM615_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11215 NZ_JAVRJW010000012.1 Protein Homology CDS 15636 16001 . - 0 ID=cds-WP_375712562.1;Parent=gene-RM615_RS11215;Dbxref=GenBank:WP_375712562.1;Name=WP_375712562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025445.7;locus_tag=RM615_RS11215;product=DUF4260 family protein;protein_id=WP_375712562.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 16584 16745 . - . ID=gene-RM615_RS10845;Name=RM615_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10845;old_locus_tag=RM615_10850 NZ_JAVRJW010000012.1 Protein Homology CDS 16584 16745 . - 0 ID=cds-WP_180706952.1;Parent=gene-RM615_RS10845;Dbxref=GenBank:WP_180706952.1;Name=WP_180706952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167674.1;locus_tag=RM615_RS10845;product=hypothetical protein;protein_id=WP_180706952.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 16777 17132 . - . ID=gene-RM615_RS10850;Name=RM615_RS10850;end_range=17132,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10850;old_locus_tag=RM615_10855;partial=true;pseudo=true NZ_JAVRJW010000012.1 Protein Homology CDS 16777 17132 . - 0 ID=cds-RM615_RS10850;Parent=gene-RM615_RS10850;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;end_range=17132,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109600.1;locus_tag=RM615_RS10850;partial=true;product=protein rep;pseudo=true;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 17311 17412 . - . ID=gene-RM615_RS10855;Name=RM615_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10855;old_locus_tag=RM615_10860 NZ_JAVRJW010000012.1 Protein Homology CDS 17311 17412 . - 0 ID=cds-WP_284570697.1;Parent=gene-RM615_RS10855;Dbxref=GenBank:WP_284570697.1;Name=WP_284570697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM615_RS10855;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_284570697.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 19986 20225 . - . ID=gene-RM615_RS10860;Name=RM615_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10860;old_locus_tag=RM615_10865 NZ_JAVRJW010000012.1 GeneMarkS-2+ CDS 19986 20225 . - 0 ID=cds-WP_311541179.1;Parent=gene-RM615_RS10860;Dbxref=GenBank:WP_311541179.1;Name=WP_311541179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10860;product=hypothetical protein;protein_id=WP_311541179.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 20253 20435 . - . ID=gene-RM615_RS11220;Name=RM615_RS11220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11220;partial=true;pseudo=true;start_range=.,20253 NZ_JAVRJW010000012.1 Protein Homology CDS 20253 20435 . - 0 ID=cds-RM615_RS11220;Parent=gene-RM615_RS11220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.7;locus_tag=RM615_RS11220;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,20253;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 20614 21060 . + . ID=gene-RM615_RS10865;Name=RM615_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10865;old_locus_tag=RM615_10870 NZ_JAVRJW010000012.1 Protein Homology CDS 20614 21060 . + 0 ID=cds-WP_311541180.1;Parent=gene-RM615_RS10865;Dbxref=GenBank:WP_311541180.1;Name=WP_311541180.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024835.7;locus_tag=RM615_RS10865;product=helix-turn-helix domain-containing protein;protein_id=WP_311541180.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 21246 21500 . + . ID=gene-RM615_RS10870;Name=RM615_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10870;old_locus_tag=RM615_10875 NZ_JAVRJW010000012.1 GeneMarkS-2+ CDS 21246 21500 . + 0 ID=cds-WP_311541181.1;Parent=gene-RM615_RS10870;Dbxref=GenBank:WP_311541181.1;Name=WP_311541181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10870;product=hypothetical protein;protein_id=WP_311541181.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq gene 21530 21625 . - . ID=gene-RM615_RS10875;Name=RM615_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10875;old_locus_tag=RM615_10880 NZ_JAVRJW010000012.1 Protein Homology CDS 21530 21625 . - 0 ID=cds-WP_107368147.1;Parent=gene-RM615_RS10875;Dbxref=GenBank:WP_107368147.1;Name=WP_107368147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=RM615_RS10875;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107368147.1;transl_table=11 NZ_JAVRJW010000012.1 RefSeq pseudogene 24339 24476 . + . ID=gene-RM615_RS11225;Name=RM615_RS11225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11225;partial=true;pseudo=true;start_range=.,24339 NZ_JAVRJW010000012.1 Protein Homology CDS 24339 24476 . + 0 ID=cds-RM615_RS11225;Parent=gene-RM615_RS11225;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916431.1;locus_tag=RM615_RS11225;partial=true;product=protein rep;pseudo=true;start_range=.,24339;transl_table=11 ##sequence-region NZ_JAVRJW010000013.1 1 20509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000013.1 RefSeq region 1 20509 . + . ID=NZ_JAVRJW010000013.1:1..20509;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000013.1 RefSeq gene 1 2019 . - . ID=gene-RM615_RS10880;Name=RM615_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10880;old_locus_tag=RM615_10890;partial=true;start_range=.,1 NZ_JAVRJW010000013.1 Protein Homology CDS 1 2019 . - 0 ID=cds-WP_311541182.1;Parent=gene-RM615_RS10880;Dbxref=GenBank:WP_311541182.1;Name=WP_311541182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021909.8;locus_tag=RM615_RS10880;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311541182.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 2376 3002 . - . ID=gene-RM615_RS10885;Name=RM615_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10885;old_locus_tag=RM615_10895 NZ_JAVRJW010000013.1 Protein Homology CDS 2376 3002 . - 0 ID=cds-WP_311541183.1;Parent=gene-RM615_RS10885;Dbxref=GenBank:WP_311541183.1;Name=WP_311541183.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443556.1;locus_tag=RM615_RS10885;product=response regulator;protein_id=WP_311541183.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 3003 4124 . - . ID=gene-RM615_RS10890;Name=RM615_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10890;old_locus_tag=RM615_10900 NZ_JAVRJW010000013.1 Protein Homology CDS 3003 4124 . - 0 ID=cds-WP_037577226.1;Parent=gene-RM615_RS10890;Dbxref=GenBank:WP_037577226.1;Name=WP_037577226.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384143.1;locus_tag=RM615_RS10890;product=GAF domain-containing sensor histidine kinase;protein_id=WP_037577226.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 4338 5168 . + . ID=gene-RM615_RS10895;Name=RM615_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10895;old_locus_tag=RM615_10905 NZ_JAVRJW010000013.1 Protein Homology CDS 4338 5168 . + 0 ID=cds-WP_037577228.1;Parent=gene-RM615_RS10895;Dbxref=GenBank:WP_037577228.1;Name=WP_037577228.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=RM615_RS10895;product=RluA family pseudouridine synthase;protein_id=WP_037577228.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 5207 7369 . - . ID=gene-RM615_RS10900;Name=RM615_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10900;old_locus_tag=RM615_10910 NZ_JAVRJW010000013.1 Protein Homology CDS 5207 7369 . - 0 ID=cds-WP_311541184.1;Parent=gene-RM615_RS10900;Dbxref=GenBank:WP_311541184.1;Name=WP_311541184.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384147.1;locus_tag=RM615_RS10900;product=RNA degradosome polyphosphate kinase;protein_id=WP_311541184.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 7462 8988 . - . ID=gene-RM615_RS10905;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=RM615_RS10905;old_locus_tag=RM615_10915 NZ_JAVRJW010000013.1 Protein Homology CDS 7462 8988 . - 0 ID=cds-WP_105963530.1;Parent=gene-RM615_RS10905;Dbxref=GenBank:WP_105963530.1;Name=WP_105963530.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302401.1;locus_tag=RM615_RS10905;product=exopolyphosphatase;protein_id=WP_105963530.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 9010 10395 . - . ID=gene-RM615_RS10910;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=RM615_RS10910;old_locus_tag=RM615_10920 NZ_JAVRJW010000013.1 Protein Homology CDS 9010 10395 . - 0 ID=cds-WP_037577233.1;Parent=gene-RM615_RS10910;Dbxref=GenBank:WP_037577233.1;Name=WP_037577233.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=RM615_RS10910;product=class II fumarate hydratase;protein_id=WP_037577233.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 10540 10950 . - . ID=gene-RM615_RS10915;Name=RM615_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10915;old_locus_tag=RM615_10925 NZ_JAVRJW010000013.1 Protein Homology CDS 10540 10950 . - 0 ID=cds-WP_311541185.1;Parent=gene-RM615_RS10915;Dbxref=GenBank:WP_311541185.1;Name=WP_311541185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474495.1;locus_tag=RM615_RS10915;product=hypothetical protein;protein_id=WP_311541185.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 11050 11214 . - . ID=gene-RM615_RS10920;Name=RM615_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10920;old_locus_tag=RM615_10930 NZ_JAVRJW010000013.1 Protein Homology CDS 11050 11214 . - 0 ID=cds-WP_157946143.1;Parent=gene-RM615_RS10920;Dbxref=GenBank:WP_157946143.1;Name=WP_157946143.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=RM615_RS10920;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_157946143.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 11232 11831 . - . ID=gene-RM615_RS10925;Name=RM615_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10925;old_locus_tag=RM615_10935 NZ_JAVRJW010000013.1 Protein Homology CDS 11232 11831 . - 0 ID=cds-WP_037577237.1;Parent=gene-RM615_RS10925;Dbxref=GenBank:WP_037577237.1;Name=WP_037577237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808097.1;locus_tag=RM615_RS10925;product=6-phosphogluconolactonase;protein_id=WP_037577237.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 11850 13019 . - . ID=gene-RM615_RS10930;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM615_RS10930;old_locus_tag=RM615_10940 NZ_JAVRJW010000013.1 Protein Homology CDS 11850 13019 . - 0 ID=cds-WP_311541186.1;Parent=gene-RM615_RS10930;Dbxref=GenBank:WP_311541186.1;Name=WP_311541186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468253.1;locus_tag=RM615_RS10930;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_311541186.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 13037 13507 . - . ID=gene-RM615_RS10935;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=RM615_RS10935;old_locus_tag=RM615_10945 NZ_JAVRJW010000013.1 Protein Homology CDS 13037 13507 . - 0 ID=cds-WP_037577242.1;Parent=gene-RM615_RS10935;Dbxref=GenBank:WP_037577242.1;Name=WP_037577242.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=RM615_RS10935;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_037577242.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 13504 14637 . - . ID=gene-RM615_RS10940;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=RM615_RS10940;old_locus_tag=RM615_10950 NZ_JAVRJW010000013.1 Protein Homology CDS 13504 14637 . - 0 ID=cds-WP_037577244.1;Parent=gene-RM615_RS10940;Dbxref=GenBank:WP_037577244.1;Name=WP_037577244.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364869.1;locus_tag=RM615_RS10940;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_037577244.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 14925 15647 . - . ID=gene-RM615_RS10945;Name=RM615_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10945;old_locus_tag=RM615_10955 NZ_JAVRJW010000013.1 Protein Homology CDS 14925 15647 . - 0 ID=cds-WP_037577247.1;Parent=gene-RM615_RS10945;Dbxref=GenBank:WP_037577247.1;Name=WP_037577247.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638026.1;locus_tag=RM615_RS10945;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_037577247.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 15640 17097 . - . ID=gene-RM615_RS10950;Name=RM615_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10950;old_locus_tag=RM615_10960 NZ_JAVRJW010000013.1 Protein Homology CDS 15640 17097 . - 0 ID=cds-WP_311541187.1;Parent=gene-RM615_RS10950;Dbxref=GenBank:WP_311541187.1;Name=WP_311541187.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471143.1;locus_tag=RM615_RS10950;product=ABC transporter substrate-binding protein/permease;protein_id=WP_311541187.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 17227 18285 . - . ID=gene-RM615_RS10955;Name=RM615_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10955;old_locus_tag=RM615_10965 NZ_JAVRJW010000013.1 Protein Homology CDS 17227 18285 . - 0 ID=cds-WP_037577252.1;Parent=gene-RM615_RS10955;Dbxref=GenBank:WP_037577252.1;Name=WP_037577252.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449624.1;locus_tag=RM615_RS10955;product=PTS sugar transporter subunit IIC;protein_id=WP_037577252.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 18329 18832 . - . ID=gene-RM615_RS10960;Name=RM615_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10960;old_locus_tag=RM615_10970 NZ_JAVRJW010000013.1 GeneMarkS-2+ CDS 18329 18832 . - 0 ID=cds-WP_103159615.1;Parent=gene-RM615_RS10960;Dbxref=GenBank:WP_103159615.1;Name=WP_103159615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10960;product=hypothetical protein;protein_id=WP_103159615.1;transl_table=11 NZ_JAVRJW010000013.1 RefSeq gene 19258 19341 . - . ID=gene-RM615_RS10965;Name=RM615_RS10965;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10965;old_locus_tag=RM615_10975 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19258 19341 . - . ID=rna-RM615_RS10965;Parent=gene-RM615_RS10965;anticodon=(pos:complement(19305..19307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10965;product=tRNA-Leu NZ_JAVRJW010000013.1 tRNAscan-SE exon 19258 19341 . - . ID=exon-RM615_RS10965-1;Parent=rna-RM615_RS10965;anticodon=(pos:complement(19305..19307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10965;product=tRNA-Leu NZ_JAVRJW010000013.1 RefSeq gene 19379 19453 . - . ID=gene-RM615_RS10970;Name=RM615_RS10970;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10970;old_locus_tag=RM615_10980 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19379 19453 . - . ID=rna-RM615_RS10970;Parent=gene-RM615_RS10970;anticodon=(pos:complement(19418..19420));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10970;product=tRNA-Gly NZ_JAVRJW010000013.1 tRNAscan-SE exon 19379 19453 . - . ID=exon-RM615_RS10970-1;Parent=rna-RM615_RS10970;anticodon=(pos:complement(19418..19420));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10970;product=tRNA-Gly NZ_JAVRJW010000013.1 RefSeq gene 19477 19551 . - . ID=gene-RM615_RS10975;Name=RM615_RS10975;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10975;old_locus_tag=RM615_10985 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19477 19551 . - . ID=rna-RM615_RS10975;Parent=gene-RM615_RS10975;anticodon=(pos:complement(19516..19518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10975;product=tRNA-Gly NZ_JAVRJW010000013.1 tRNAscan-SE exon 19477 19551 . - . ID=exon-RM615_RS10975-1;Parent=rna-RM615_RS10975;anticodon=(pos:complement(19516..19518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10975;product=tRNA-Gly NZ_JAVRJW010000013.1 RefSeq gene 19577 19651 . - . ID=gene-RM615_RS10980;Name=RM615_RS10980;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10980;old_locus_tag=RM615_10990 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19577 19651 . - . ID=rna-RM615_RS10980;Parent=gene-RM615_RS10980;anticodon=(pos:complement(19616..19618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10980;product=tRNA-Gly NZ_JAVRJW010000013.1 tRNAscan-SE exon 19577 19651 . - . ID=exon-RM615_RS10980-1;Parent=rna-RM615_RS10980;anticodon=(pos:complement(19616..19618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10980;product=tRNA-Gly NZ_JAVRJW010000013.1 RefSeq gene 19663 19737 . - . ID=gene-RM615_RS10985;Name=RM615_RS10985;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10985;old_locus_tag=RM615_10995 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19663 19737 . - . ID=rna-RM615_RS10985;Parent=gene-RM615_RS10985;anticodon=(pos:complement(19703..19705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10985;product=tRNA-Cys NZ_JAVRJW010000013.1 tRNAscan-SE exon 19663 19737 . - . ID=exon-RM615_RS10985-1;Parent=rna-RM615_RS10985;anticodon=(pos:complement(19703..19705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10985;product=tRNA-Cys NZ_JAVRJW010000013.1 RefSeq gene 19746 19817 . - . ID=gene-RM615_RS10990;Name=RM615_RS10990;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10990;old_locus_tag=RM615_11000 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19746 19817 . - . ID=rna-RM615_RS10990;Parent=gene-RM615_RS10990;anticodon=(pos:complement(19783..19785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10990;product=tRNA-Gln NZ_JAVRJW010000013.1 tRNAscan-SE exon 19746 19817 . - . ID=exon-RM615_RS10990-1;Parent=rna-RM615_RS10990;anticodon=(pos:complement(19783..19785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10990;product=tRNA-Gln NZ_JAVRJW010000013.1 RefSeq gene 19834 19906 . - . ID=gene-RM615_RS10995;Name=RM615_RS10995;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS10995;old_locus_tag=RM615_11005 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19834 19906 . - . ID=rna-RM615_RS10995;Parent=gene-RM615_RS10995;anticodon=(pos:complement(19871..19873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10995;product=tRNA-His NZ_JAVRJW010000013.1 tRNAscan-SE exon 19834 19906 . - . ID=exon-RM615_RS10995-1;Parent=rna-RM615_RS10995;anticodon=(pos:complement(19871..19873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS10995;product=tRNA-His NZ_JAVRJW010000013.1 RefSeq gene 19909 19982 . - . ID=gene-RM615_RS11000;Name=RM615_RS11000;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS11000;old_locus_tag=RM615_11010 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19909 19982 . - . ID=rna-RM615_RS11000;Parent=gene-RM615_RS11000;anticodon=(pos:complement(19948..19950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11000;product=tRNA-Trp NZ_JAVRJW010000013.1 tRNAscan-SE exon 19909 19982 . - . ID=exon-RM615_RS11000-1;Parent=rna-RM615_RS11000;anticodon=(pos:complement(19948..19950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11000;product=tRNA-Trp NZ_JAVRJW010000013.1 RefSeq gene 19990 20073 . - . ID=gene-RM615_RS11005;Name=RM615_RS11005;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS11005;old_locus_tag=RM615_11015 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 19990 20073 . - . ID=rna-RM615_RS11005;Parent=gene-RM615_RS11005;anticodon=(pos:complement(20037..20039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11005;product=tRNA-Tyr NZ_JAVRJW010000013.1 tRNAscan-SE exon 19990 20073 . - . ID=exon-RM615_RS11005-1;Parent=rna-RM615_RS11005;anticodon=(pos:complement(20037..20039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11005;product=tRNA-Tyr NZ_JAVRJW010000013.1 RefSeq gene 20079 20154 . - . ID=gene-RM615_RS11010;Name=RM615_RS11010;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS11010;old_locus_tag=RM615_11020 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 20079 20154 . - . ID=rna-RM615_RS11010;Parent=gene-RM615_RS11010;anticodon=(pos:complement(20119..20121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11010;product=tRNA-Thr NZ_JAVRJW010000013.1 tRNAscan-SE exon 20079 20154 . - . ID=exon-RM615_RS11010-1;Parent=rna-RM615_RS11010;anticodon=(pos:complement(20119..20121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11010;product=tRNA-Thr NZ_JAVRJW010000013.1 RefSeq gene 20169 20244 . - . ID=gene-RM615_RS11015;Name=RM615_RS11015;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS11015;old_locus_tag=RM615_11025 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 20169 20244 . - . ID=rna-RM615_RS11015;Parent=gene-RM615_RS11015;anticodon=(pos:complement(20209..20211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11015;product=tRNA-Phe NZ_JAVRJW010000013.1 tRNAscan-SE exon 20169 20244 . - . ID=exon-RM615_RS11015-1;Parent=rna-RM615_RS11015;anticodon=(pos:complement(20209..20211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11015;product=tRNA-Phe NZ_JAVRJW010000013.1 RefSeq gene 20255 20331 . - . ID=gene-RM615_RS11020;Name=RM615_RS11020;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS11020;old_locus_tag=RM615_11030 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 20255 20331 . - . ID=rna-RM615_RS11020;Parent=gene-RM615_RS11020;anticodon=(pos:complement(20295..20297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11020;product=tRNA-Asp NZ_JAVRJW010000013.1 tRNAscan-SE exon 20255 20331 . - . ID=exon-RM615_RS11020-1;Parent=rna-RM615_RS11020;anticodon=(pos:complement(20295..20297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11020;product=tRNA-Asp NZ_JAVRJW010000013.1 RefSeq gene 20343 20416 . - . ID=gene-RM615_RS11025;Name=RM615_RS11025;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS11025;old_locus_tag=RM615_11035 NZ_JAVRJW010000013.1 tRNAscan-SE tRNA 20343 20416 . - . ID=rna-RM615_RS11025;Parent=gene-RM615_RS11025;anticodon=(pos:complement(20380..20382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11025;product=tRNA-Met NZ_JAVRJW010000013.1 tRNAscan-SE exon 20343 20416 . - . ID=exon-RM615_RS11025-1;Parent=rna-RM615_RS11025;anticodon=(pos:complement(20380..20382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS11025;product=tRNA-Met ##sequence-region NZ_JAVRJW010000014.1 1 13656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000014.1 RefSeq region 1 13656 . + . ID=NZ_JAVRJW010000014.1:1..13656;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000014.1 RefSeq gene 1 314 . - . ID=gene-RM615_RS11030;Name=RM615_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11030;old_locus_tag=RM615_11040;partial=true;start_range=.,1 NZ_JAVRJW010000014.1 GeneMarkS-2+ CDS 1 314 . - 0 ID=cds-WP_311541188.1;Parent=gene-RM615_RS11030;Dbxref=GenBank:WP_311541188.1;Name=WP_311541188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS11030;partial=true;product=hypothetical protein;protein_id=WP_311541188.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000014.1 RefSeq gene 256 8823 . + . ID=gene-RM615_RS11035;Name=RM615_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11035;old_locus_tag=RM615_11045 NZ_JAVRJW010000014.1 Protein Homology CDS 256 8823 . + 0 ID=cds-WP_311541189.1;Parent=gene-RM615_RS11035;Dbxref=GenBank:WP_311541189.1;Name=WP_311541189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533362.1;locus_tag=RM615_RS11035;product=Rib/alpha-like domain-containing protein;protein_id=WP_311541189.1;transl_table=11 NZ_JAVRJW010000014.1 RefSeq gene 8968 10098 . - . ID=gene-RM615_RS11040;Name=RM615_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11040;old_locus_tag=RM615_11050 NZ_JAVRJW010000014.1 Protein Homology CDS 8968 10098 . - 0 ID=cds-WP_037577339.1;Parent=gene-RM615_RS11040;Dbxref=GenBank:WP_037577339.1;Name=WP_037577339.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426134.1;locus_tag=RM615_RS11040;product=PucR family transcriptional regulator;protein_id=WP_037577339.1;transl_table=11 NZ_JAVRJW010000014.1 RefSeq gene 10502 13656 . + . ID=gene-RM615_RS11045;Name=RM615_RS11045;end_range=13656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11045;old_locus_tag=RM615_11055;partial=true NZ_JAVRJW010000014.1 Protein Homology CDS 10502 13656 . + 0 ID=cds-WP_311541190.1;Parent=gene-RM615_RS11045;Dbxref=GenBank:WP_311541190.1;Name=WP_311541190.1;end_range=13656,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM615_RS11045;partial=true;product=Rib/alpha-like domain-containing protein;protein_id=WP_311541190.1;transl_table=11 ##sequence-region NZ_JAVRJW010000015.1 1 4792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000015.1 RefSeq region 1 4792 . + . ID=NZ_JAVRJW010000015.1:1..4792;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000015.1 RefSeq gene 421 1683 . - . ID=gene-RM615_RS11050;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM615_RS11050;old_locus_tag=RM615_11060 NZ_JAVRJW010000015.1 Protein Homology CDS 421 1683 . - 0 ID=cds-WP_000119405.1;Parent=gene-RM615_RS11050;Dbxref=GenBank:WP_000119405.1;Name=WP_000119405.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619005.1;locus_tag=RM615_RS11050;product=MobV family relaxase;protein_id=WP_000119405.1;transl_table=11 NZ_JAVRJW010000015.1 RefSeq gene 2247 3623 . - . ID=gene-RM615_RS11055;Name=tet(L);gbkey=Gene;gene=tet(L);gene_biotype=protein_coding;locus_tag=RM615_RS11055;old_locus_tag=RM615_11065 NZ_JAVRJW010000015.1 Protein Homology CDS 2247 3623 . - 0 ID=cds-WP_001574277.1;Parent=gene-RM615_RS11055;Dbxref=GenBank:WP_001574277.1;Name=WP_001574277.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(L);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574277.1;locus_tag=RM615_RS11055;product=tetracycline efflux MFS transporter Tet(L);protein_id=WP_001574277.1;transl_table=11 NZ_JAVRJW010000015.1 RefSeq gene 3657 3719 . - . ID=gene-RM615_RS11230;Name=RM615_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11230 NZ_JAVRJW010000015.1 Protein Homology CDS 3657 3719 . - 0 ID=cds-WP_012779615.1;Parent=gene-RM615_RS11230;Dbxref=GenBank:WP_012779615.1;Name=WP_012779615.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_167840811.1;locus_tag=RM615_RS11230;product=tetracycline resistance efflux system leader peptide;protein_id=WP_012779615.1;transl_table=11 NZ_JAVRJW010000015.1 RefSeq gene 3823 4683 . - . ID=gene-RM615_RS11060;Name=RM615_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11060;old_locus_tag=RM615_11070 NZ_JAVRJW010000015.1 Protein Homology CDS 3823 4683 . - 0 ID=cds-WP_275691666.1;Parent=gene-RM615_RS11060;Dbxref=GenBank:WP_275691666.1;Name=WP_275691666.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829696.1;locus_tag=RM615_RS11060;product=protein rep;protein_id=WP_275691666.1;transl_table=11 ##sequence-region NZ_JAVRJW010000016.1 1 4719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000016.1 RefSeq region 1 4719 . + . ID=NZ_JAVRJW010000016.1:1..4719;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000016.1 RefSeq gene 99 335 . + . ID=gene-RM615_RS11065;Name=RM615_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11065;old_locus_tag=RM615_11075 NZ_JAVRJW010000016.1 GeneMarkS-2+ CDS 99 335 . + 0 ID=cds-WP_311541192.1;Parent=gene-RM615_RS11065;Dbxref=GenBank:WP_311541192.1;Name=WP_311541192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS11065;product=hypothetical protein;protein_id=WP_311541192.1;transl_table=11 NZ_JAVRJW010000016.1 RefSeq gene 434 514 . - . ID=gene-RM615_RS11070;Name=RM615_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11070;old_locus_tag=RM615_11080 NZ_JAVRJW010000016.1 Protein Homology CDS 434 514 . - 0 ID=cds-WP_311541493.1;Parent=gene-RM615_RS11070;Dbxref=GenBank:WP_311541493.1;Name=WP_311541493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024729.7;locus_tag=RM615_RS11070;product=IS3 family transposase;protein_id=WP_311541493.1;transl_table=11 NZ_JAVRJW010000016.1 RefSeq pseudogene 500 852 . - . ID=gene-RM615_RS11075;Name=RM615_RS11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11075;old_locus_tag=RM615_11085;partial=true;pseudo=true;start_range=.,500 NZ_JAVRJW010000016.1 Protein Homology CDS 500 852 . - 0 ID=cds-RM615_RS11075;Parent=gene-RM615_RS11075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=RM615_RS11075;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,500;transl_table=11 NZ_JAVRJW010000016.1 RefSeq gene 1318 2514 . - . ID=gene-RM615_RS11080;Name=RM615_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11080;old_locus_tag=RM615_11090 NZ_JAVRJW010000016.1 Protein Homology CDS 1318 2514 . - 0 ID=cds-WP_311541193.1;Parent=gene-RM615_RS11080;Dbxref=GenBank:WP_311541193.1;Name=WP_311541193.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=RM615_RS11080;product=MFS transporter;protein_id=WP_311541193.1;transl_table=11 NZ_JAVRJW010000016.1 RefSeq gene 2965 3582 . - . ID=gene-RM615_RS11085;Name=RM615_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11085;old_locus_tag=RM615_11095 NZ_JAVRJW010000016.1 Protein Homology CDS 2965 3582 . - 0 ID=cds-WP_311541195.1;Parent=gene-RM615_RS11085;Dbxref=GenBank:WP_311541195.1;Name=WP_311541195.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458044.1;locus_tag=RM615_RS11085;product=LysE/ArgO family amino acid transporter;protein_id=WP_311541195.1;transl_table=11 NZ_JAVRJW010000016.1 RefSeq gene 3586 4557 . - . ID=gene-RM615_RS11090;Name=RM615_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11090;old_locus_tag=RM615_11100 NZ_JAVRJW010000016.1 Protein Homology CDS 3586 4557 . - 0 ID=cds-WP_311541196.1;Parent=gene-RM615_RS11090;Dbxref=GenBank:WP_311541196.1;Name=WP_311541196.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053810.1;locus_tag=RM615_RS11090;product=fatty acid desaturase;protein_id=WP_311541196.1;transl_table=11 ##sequence-region NZ_JAVRJW010000017.1 1 1920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000017.1 RefSeq region 1 1920 . + . ID=NZ_JAVRJW010000017.1:1..1920;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000017.1 RefSeq gene 247 789 . - . ID=gene-RM615_RS11095;Name=RM615_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11095;old_locus_tag=RM615_11105 NZ_JAVRJW010000017.1 GeneMarkS-2+ CDS 247 789 . - 0 ID=cds-WP_107368149.1;Parent=gene-RM615_RS11095;Dbxref=GenBank:WP_107368149.1;Name=WP_107368149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS11095;product=hypothetical protein;protein_id=WP_107368149.1;transl_table=11 NZ_JAVRJW010000017.1 RefSeq gene 1399 1599 . + . ID=gene-RM615_RS11100;Name=RM615_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11100;old_locus_tag=RM615_11110 NZ_JAVRJW010000017.1 Protein Homology CDS 1399 1599 . + 0 ID=cds-WP_031795395.1;Parent=gene-RM615_RS11100;Dbxref=GenBank:WP_031795395.1;Name=WP_031795395.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477819.1;locus_tag=RM615_RS11100;product=cold-shock protein;protein_id=WP_031795395.1;transl_table=11 ##sequence-region NZ_JAVRJW010000018.1 1 1808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000018.1 RefSeq region 1 1808 . + . ID=NZ_JAVRJW010000018.1:1..1808;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000018.1 RefSeq gene 1 1784 . - . ID=gene-RM615_RS11105;Name=RM615_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11105;old_locus_tag=RM615_11115;partial=true;start_range=.,1 NZ_JAVRJW010000018.1 Protein Homology CDS 1 1784 . - 0 ID=cds-WP_311541198.1;Parent=gene-RM615_RS11105;Dbxref=GenBank:WP_311541198.1;Name=WP_311541198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM615_RS11105;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311541198.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJW010000019.1 1 1647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000019.1 RefSeq region 1 1647 . + . ID=NZ_JAVRJW010000019.1:1..1647;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000019.1 RefSeq gene 50 1600 . - . ID=gene-RM615_RS11110;Name=RM615_RS11110;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM615_RS11110;old_locus_tag=RM615_11120 NZ_JAVRJW010000019.1 cmsearch rRNA 50 1600 . - . ID=rna-RM615_RS11110;Parent=gene-RM615_RS11110;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS11110;product=16S ribosomal RNA NZ_JAVRJW010000019.1 cmsearch exon 50 1600 . - . ID=exon-RM615_RS11110-1;Parent=rna-RM615_RS11110;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS11110;product=16S ribosomal RNA ##sequence-region NZ_JAVRJW010000001.1 1 875479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000001.1 RefSeq region 1 875479 . + . ID=NZ_JAVRJW010000001.1:1..875479;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000001.1 RefSeq gene 136 250 . + . ID=gene-RM615_RS00005;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM615_RS00005;old_locus_tag=RM615_00005 NZ_JAVRJW010000001.1 cmsearch rRNA 136 250 . + . ID=rna-RM615_RS00005;Parent=gene-RM615_RS00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS00005;product=5S ribosomal RNA NZ_JAVRJW010000001.1 cmsearch exon 136 250 . + . ID=exon-RM615_RS00005-1;Parent=rna-RM615_RS00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS00005;product=5S ribosomal RNA NZ_JAVRJW010000001.1 RefSeq gene 388 2331 . + . ID=gene-RM615_RS00010;Name=RM615_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00010;old_locus_tag=RM615_00010 NZ_JAVRJW010000001.1 Protein Homology CDS 388 2331 . + 0 ID=cds-WP_241955005.1;Parent=gene-RM615_RS00010;Dbxref=GenBank:WP_241955005.1;Name=WP_241955005.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=RM615_RS00010;product=FUSC family protein;protein_id=WP_241955005.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 2428 3843 . - . ID=gene-RM615_RS00015;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=RM615_RS00015;old_locus_tag=RM615_00015 NZ_JAVRJW010000001.1 Protein Homology CDS 2428 3843 . - 0 ID=cds-WP_051604943.1;Parent=gene-RM615_RS00015;Dbxref=GenBank:WP_051604943.1;Name=WP_051604943.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911182.1;locus_tag=RM615_RS00015;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_051604943.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 3953 4840 . + . ID=gene-RM615_RS00020;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=RM615_RS00020;old_locus_tag=RM615_00020 NZ_JAVRJW010000001.1 Protein Homology CDS 3953 4840 . + 0 ID=cds-WP_103158782.1;Parent=gene-RM615_RS00020;Dbxref=GenBank:WP_103158782.1;Name=WP_103158782.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=RM615_RS00020;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_103158782.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 4842 5402 . + . ID=gene-RM615_RS00025;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=RM615_RS00025;old_locus_tag=RM615_00025 NZ_JAVRJW010000001.1 Protein Homology CDS 4842 5402 . + 0 ID=cds-WP_103158781.1;Parent=gene-RM615_RS00025;Dbxref=GenBank:WP_103158781.1;Name=WP_103158781.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499073.1;locus_tag=RM615_RS00025;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_103158781.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 5589 6794 . - . ID=gene-RM615_RS00030;Name=RM615_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00030;old_locus_tag=RM615_00030 NZ_JAVRJW010000001.1 Protein Homology CDS 5589 6794 . - 0 ID=cds-WP_311540652.1;Parent=gene-RM615_RS00030;Dbxref=GenBank:WP_311540652.1;Name=WP_311540652.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=RM615_RS00030;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_311540652.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 6959 7420 . + . ID=gene-RM615_RS00035;Name=RM615_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00035;old_locus_tag=RM615_00035 NZ_JAVRJW010000001.1 Protein Homology CDS 6959 7420 . + 0 ID=cds-WP_103158780.1;Parent=gene-RM615_RS00035;Dbxref=GenBank:WP_103158780.1;Name=WP_103158780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=RM615_RS00035;product=CtsR family transcriptional regulator;protein_id=WP_103158780.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 7465 7971 . + . ID=gene-RM615_RS00040;Name=RM615_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00040;old_locus_tag=RM615_00040 NZ_JAVRJW010000001.1 Protein Homology CDS 7465 7971 . + 0 ID=cds-WP_051604952.1;Parent=gene-RM615_RS00040;Dbxref=GenBank:WP_051604952.1;Name=WP_051604952.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424280.1;locus_tag=RM615_RS00040;product=UvrB/UvrC motif-containing protein;protein_id=WP_051604952.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 7955 8959 . + . ID=gene-RM615_RS00045;Name=RM615_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00045;old_locus_tag=RM615_00045 NZ_JAVRJW010000001.1 Protein Homology CDS 7955 8959 . + 0 ID=cds-WP_037573001.1;Parent=gene-RM615_RS00045;Dbxref=GenBank:WP_037573001.1;Name=WP_037573001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424281.1;locus_tag=RM615_RS00045;product=protein arginine kinase;protein_id=WP_037573001.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 8972 11458 . + . ID=gene-RM615_RS00050;Name=RM615_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00050;old_locus_tag=RM615_00050 NZ_JAVRJW010000001.1 Protein Homology CDS 8972 11458 . + 0 ID=cds-WP_103158779.1;Parent=gene-RM615_RS00050;Dbxref=GenBank:WP_103158779.1;Name=WP_103158779.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169089.1;locus_tag=RM615_RS00050;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_103158779.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 11585 12958 . + . ID=gene-RM615_RS00055;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=RM615_RS00055;old_locus_tag=RM615_00055 NZ_JAVRJW010000001.1 Protein Homology CDS 11585 12958 . + 0 ID=cds-WP_105965080.1;Parent=gene-RM615_RS00055;Dbxref=GenBank:WP_105965080.1;Name=WP_105965080.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1;locus_tag=RM615_RS00055;product=DNA repair protein RadA;protein_id=WP_105965080.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 12975 14039 . + . ID=gene-RM615_RS00060;Name=RM615_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00060;old_locus_tag=RM615_00060 NZ_JAVRJW010000001.1 Protein Homology CDS 12975 14039 . + 0 ID=cds-WP_103158777.1;Parent=gene-RM615_RS00060;Dbxref=GenBank:WP_103158777.1;Name=WP_103158777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276734.1;locus_tag=RM615_RS00060;product=PIN/TRAM domain-containing protein;protein_id=WP_103158777.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 14039 14737 . + . ID=gene-RM615_RS00065;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=RM615_RS00065;old_locus_tag=RM615_00065 NZ_JAVRJW010000001.1 Protein Homology CDS 14039 14737 . + 0 ID=cds-WP_105962896.1;Parent=gene-RM615_RS00065;Dbxref=GenBank:WP_105962896.1;Name=WP_105962896.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=RM615_RS00065;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_105962896.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 14730 15209 . + . ID=gene-RM615_RS00070;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=RM615_RS00070;old_locus_tag=RM615_00070 NZ_JAVRJW010000001.1 Protein Homology CDS 14730 15209 . + 0 ID=cds-WP_037572986.1;Parent=gene-RM615_RS00070;Dbxref=GenBank:WP_037572986.1;Name=WP_037572986.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911171.1;locus_tag=RM615_RS00070;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_037572986.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 15286 16740 . + . ID=gene-RM615_RS00075;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=RM615_RS00075;old_locus_tag=RM615_00075 NZ_JAVRJW010000001.1 Protein Homology CDS 15286 16740 . + 0 ID=cds-WP_105965081.1;Parent=gene-RM615_RS00075;Dbxref=GenBank:WP_105965081.1;Name=WP_105965081.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728607.1;locus_tag=RM615_RS00075;product=glutamate--tRNA ligase;protein_id=WP_105965081.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 17068 17706 . + . ID=gene-RM615_RS00080;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=RM615_RS00080;old_locus_tag=RM615_00080 NZ_JAVRJW010000001.1 Protein Homology CDS 17068 17706 . + 0 ID=cds-WP_258026740.1;Parent=gene-RM615_RS00080;Dbxref=GenBank:WP_258026740.1;Name=WP_258026740.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638459.1;locus_tag=RM615_RS00080;product=serine O-acetyltransferase;protein_id=WP_258026740.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 17690 19090 . + . ID=gene-RM615_RS00085;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=RM615_RS00085;old_locus_tag=RM615_00085 NZ_JAVRJW010000001.1 Protein Homology CDS 17690 19090 . + 0 ID=cds-WP_105996649.1;Parent=gene-RM615_RS00085;Dbxref=GenBank:WP_105996649.1;Name=WP_105996649.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=RM615_RS00085;product=cysteine--tRNA ligase;protein_id=WP_105996649.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 19083 19484 . + . ID=gene-RM615_RS00090;Name=RM615_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00090;old_locus_tag=RM615_00090 NZ_JAVRJW010000001.1 Protein Homology CDS 19083 19484 . + 0 ID=cds-WP_037572975.1;Parent=gene-RM615_RS00090;Dbxref=GenBank:WP_037572975.1;Name=WP_037572975.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=RM615_RS00090;product=Mini-ribonuclease 3;protein_id=WP_037572975.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 19491 20246 . + . ID=gene-RM615_RS00095;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=RM615_RS00095;old_locus_tag=RM615_00095 NZ_JAVRJW010000001.1 Protein Homology CDS 19491 20246 . + 0 ID=cds-WP_311540834.1;Parent=gene-RM615_RS00095;Dbxref=GenBank:WP_311540834.1;Name=WP_311540834.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=RM615_RS00095;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_311540834.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 20243 20767 . + . ID=gene-RM615_RS00100;Name=RM615_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00100;old_locus_tag=RM615_00100 NZ_JAVRJW010000001.1 Protein Homology CDS 20243 20767 . + 0 ID=cds-WP_105962897.1;Parent=gene-RM615_RS00100;Dbxref=GenBank:WP_105962897.1;Name=WP_105962897.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499087.1;locus_tag=RM615_RS00100;product=NYN domain-containing protein;protein_id=WP_105962897.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 20842 21426 . + . ID=gene-RM615_RS00105;Name=RM615_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00105;old_locus_tag=RM615_00105 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 20842 21426 . + 0 ID=cds-WP_037572965.1;Parent=gene-RM615_RS00105;Dbxref=GenBank:WP_037572965.1;Name=WP_037572965.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS00105;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_037572965.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 21506 21649 . + . ID=gene-RM615_RS00110;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM615_RS00110;old_locus_tag=RM615_00110 NZ_JAVRJW010000001.1 Protein Homology CDS 21506 21649 . + 0 ID=cds-WP_105996650.1;Parent=gene-RM615_RS00110;Dbxref=GenBank:WP_105996650.1;Name=WP_105996650.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR01023.1;locus_tag=RM615_RS00110;product=50S ribosomal protein L33;protein_id=WP_105996650.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 21736 21915 . + . ID=gene-RM615_RS00115;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=RM615_RS00115;old_locus_tag=RM615_00115 NZ_JAVRJW010000001.1 Protein Homology CDS 21736 21915 . + 0 ID=cds-WP_037572962.1;Parent=gene-RM615_RS00115;Dbxref=GenBank:WP_037572962.1;Name=WP_037572962.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=RM615_RS00115;product=preprotein translocase subunit SecE;protein_id=WP_037572962.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 21934 22482 . + . ID=gene-RM615_RS00120;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=RM615_RS00120;old_locus_tag=RM615_00120 NZ_JAVRJW010000001.1 Protein Homology CDS 21934 22482 . + 0 ID=cds-WP_037572959.1;Parent=gene-RM615_RS00120;Dbxref=GenBank:WP_037572959.1;Name=WP_037572959.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=RM615_RS00120;product=transcription termination/antitermination protein NusG;protein_id=WP_037572959.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 23024 23446 . + . ID=gene-RM615_RS00125;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=RM615_RS00125;old_locus_tag=RM615_00125 NZ_JAVRJW010000001.1 Protein Homology CDS 23024 23446 . + 0 ID=cds-WP_037572949.1;Parent=gene-RM615_RS00125;Dbxref=GenBank:WP_037572949.1;Name=WP_037572949.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=RM615_RS00125;product=50S ribosomal protein L11;protein_id=WP_037572949.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 23652 24350 . + . ID=gene-RM615_RS00130;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=RM615_RS00130;old_locus_tag=RM615_00130 NZ_JAVRJW010000001.1 Protein Homology CDS 23652 24350 . + 0 ID=cds-WP_037572943.1;Parent=gene-RM615_RS00130;Dbxref=GenBank:WP_037572943.1;Name=WP_037572943.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=RM615_RS00130;product=50S ribosomal protein L1;protein_id=WP_037572943.1;transl_table=11 NZ_JAVRJW010000001.1 cmsearch sequence_feature 24466 24607 . + . ID=id-NZ_JAVRJW010000001.1:24466..24607;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00557,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000001.1 RefSeq gene 24653 25153 . + . ID=gene-RM615_RS00135;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=RM615_RS00135;old_locus_tag=RM615_00135 NZ_JAVRJW010000001.1 Protein Homology CDS 24653 25153 . + 0 ID=cds-WP_037572940.1;Parent=gene-RM615_RS00135;Dbxref=GenBank:WP_037572940.1;Name=WP_037572940.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=RM615_RS00135;product=50S ribosomal protein L10;protein_id=WP_037572940.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 25208 25573 . + . ID=gene-RM615_RS00140;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=RM615_RS00140;old_locus_tag=RM615_00140 NZ_JAVRJW010000001.1 Protein Homology CDS 25208 25573 . + 0 ID=cds-WP_037572937.1;Parent=gene-RM615_RS00140;Dbxref=GenBank:WP_037572937.1;Name=WP_037572937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=RM615_RS00140;product=50S ribosomal protein L7/L12;protein_id=WP_037572937.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 25655 26263 . + . ID=gene-RM615_RS00145;Name=RM615_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00145;old_locus_tag=RM615_00145 NZ_JAVRJW010000001.1 Protein Homology CDS 25655 26263 . + 0 ID=cds-WP_105965086.1;Parent=gene-RM615_RS00145;Dbxref=GenBank:WP_105965086.1;Name=WP_105965086.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449036.1;locus_tag=RM615_RS00145;product=class I SAM-dependent methyltransferase;protein_id=WP_105965086.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 26475 30026 . + . ID=gene-RM615_RS00150;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=RM615_RS00150;old_locus_tag=RM615_00150 NZ_JAVRJW010000001.1 Protein Homology CDS 26475 30026 . + 0 ID=cds-WP_037572930.1;Parent=gene-RM615_RS00150;Dbxref=GenBank:WP_037572930.1;Name=WP_037572930.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=RM615_RS00150;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_037572930.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 30169 33789 . + . ID=gene-RM615_RS00155;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=RM615_RS00155;old_locus_tag=RM615_00155 NZ_JAVRJW010000001.1 Protein Homology CDS 30169 33789 . + 0 ID=cds-WP_105996651.1;Parent=gene-RM615_RS00155;Dbxref=GenBank:WP_105996651.1;Name=WP_105996651.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=RM615_RS00155;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_105996651.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 33927 34181 . + . ID=gene-RM615_RS00160;Name=RM615_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00160;old_locus_tag=RM615_00160 NZ_JAVRJW010000001.1 Protein Homology CDS 33927 34181 . + 0 ID=cds-WP_037572924.1;Parent=gene-RM615_RS00160;Dbxref=GenBank:WP_037572924.1;Name=WP_037572924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=RM615_RS00160;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_037572924.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 34280 34693 . + . ID=gene-RM615_RS00165;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=RM615_RS00165;old_locus_tag=RM615_00165 NZ_JAVRJW010000001.1 Protein Homology CDS 34280 34693 . + 0 ID=cds-WP_311540835.1;Parent=gene-RM615_RS00165;Dbxref=GenBank:WP_311540835.1;Name=WP_311540835.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=RM615_RS00165;product=30S ribosomal protein S12;protein_id=WP_311540835.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 34776 35246 . + . ID=gene-RM615_RS00170;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=RM615_RS00170;old_locus_tag=RM615_00170 NZ_JAVRJW010000001.1 Protein Homology CDS 34776 35246 . + 0 ID=cds-WP_014614746.1;Parent=gene-RM615_RS00170;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=RM615_RS00170;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 35390 37471 . + . ID=gene-RM615_RS00175;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=RM615_RS00175;old_locus_tag=RM615_00175 NZ_JAVRJW010000001.1 Protein Homology CDS 35390 37471 . + 0 ID=cds-WP_037572918.1;Parent=gene-RM615_RS00175;Dbxref=GenBank:WP_037572918.1;Name=WP_037572918.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=RM615_RS00175;product=elongation factor G;protein_id=WP_037572918.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 37662 38849 . + . ID=gene-RM615_RS00180;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=RM615_RS00180;old_locus_tag=RM615_00180 NZ_JAVRJW010000001.1 Protein Homology CDS 37662 38849 . + 0 ID=cds-WP_037572915.1;Parent=gene-RM615_RS00180;Dbxref=GenBank:WP_037572915.1;Name=WP_037572915.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=RM615_RS00180;product=elongation factor Tu;protein_id=WP_037572915.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 39394 40560 . - . ID=gene-RM615_RS00185;Name=RM615_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00185;old_locus_tag=RM615_00185 NZ_JAVRJW010000001.1 Protein Homology CDS 39394 40560 . - 0 ID=cds-WP_037572912.1;Parent=gene-RM615_RS00185;Dbxref=GenBank:WP_037572912.1;Name=WP_037572912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383855.1;locus_tag=RM615_RS00185;product=M20 family metallopeptidase;protein_id=WP_037572912.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 40669 41859 . + . ID=gene-RM615_RS00190;Name=RM615_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00190;old_locus_tag=RM615_00190 NZ_JAVRJW010000001.1 Protein Homology CDS 40669 41859 . + 0 ID=cds-WP_037572909.1;Parent=gene-RM615_RS00190;Dbxref=GenBank:WP_037572909.1;Name=WP_037572909.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=RM615_RS00190;product=glycine C-acetyltransferase;protein_id=WP_037572909.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 42169 43128 . + . ID=gene-RM615_RS00195;Name=RM615_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00195;old_locus_tag=RM615_00195 NZ_JAVRJW010000001.1 Protein Homology CDS 42169 43128 . + 0 ID=cds-WP_037572906.1;Parent=gene-RM615_RS00195;Dbxref=GenBank:WP_037572906.1;Name=WP_037572906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=RM615_RS00195;product=L-threonine 3-dehydrogenase;protein_id=WP_037572906.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 43399 44475 . + . ID=gene-RM615_RS00200;Name=RM615_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00200;old_locus_tag=RM615_00200 NZ_JAVRJW010000001.1 Protein Homology CDS 43399 44475 . + 0 ID=cds-WP_037572903.1;Parent=gene-RM615_RS00200;Dbxref=GenBank:WP_037572903.1;Name=WP_037572903.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467887.1;locus_tag=RM615_RS00200;product=branched-chain amino acid aminotransferase;protein_id=WP_037572903.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 44825 45943 . - . ID=gene-RM615_RS00205;Name=RM615_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00205;old_locus_tag=RM615_00205 NZ_JAVRJW010000001.1 Protein Homology CDS 44825 45943 . - 0 ID=cds-WP_105962904.1;Parent=gene-RM615_RS00205;Dbxref=GenBank:WP_105962904.1;Name=WP_105962904.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424330.1;locus_tag=RM615_RS00205;product=MFS transporter;protein_id=WP_105962904.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 45940 46983 . - . ID=gene-RM615_RS00210;Name=RM615_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00210;old_locus_tag=RM615_00210 NZ_JAVRJW010000001.1 Protein Homology CDS 45940 46983 . - 0 ID=cds-WP_037572899.1;Parent=gene-RM615_RS00210;Dbxref=GenBank:WP_037572899.1;Name=WP_037572899.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474544.1;locus_tag=RM615_RS00210;product=Gfo/Idh/MocA family protein;protein_id=WP_037572899.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 46976 47788 . - . ID=gene-RM615_RS00215;Name=RM615_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00215;old_locus_tag=RM615_00215 NZ_JAVRJW010000001.1 Protein Homology CDS 46976 47788 . - 0 ID=cds-WP_037572897.1;Parent=gene-RM615_RS00215;Dbxref=GenBank:WP_037572897.1;Name=WP_037572897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167714.1;locus_tag=RM615_RS00215;product=HAD-IIB family hydrolase;protein_id=WP_037572897.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 47785 49023 . - . ID=gene-RM615_RS00220;Name=RM615_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00220;old_locus_tag=RM615_00220 NZ_JAVRJW010000001.1 Protein Homology CDS 47785 49023 . - 0 ID=cds-WP_311540836.1;Parent=gene-RM615_RS00220;Dbxref=GenBank:WP_311540836.1;Name=WP_311540836.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167715.1;locus_tag=RM615_RS00220;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_311540836.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 49110 50090 . + . ID=gene-RM615_RS00225;Name=RM615_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00225;old_locus_tag=RM615_00225 NZ_JAVRJW010000001.1 Protein Homology CDS 49110 50090 . + 0 ID=cds-WP_105962906.1;Parent=gene-RM615_RS00225;Dbxref=GenBank:WP_105962906.1;Name=WP_105962906.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474518.1;locus_tag=RM615_RS00225;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_105962906.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 50478 51167 . + . ID=gene-RM615_RS00230;Name=RM615_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00230;old_locus_tag=RM615_00230 NZ_JAVRJW010000001.1 Protein Homology CDS 50478 51167 . + 0 ID=cds-WP_105996652.1;Parent=gene-RM615_RS00230;Dbxref=GenBank:WP_105996652.1;Name=WP_105996652.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424315.1;locus_tag=RM615_RS00230;product=HAD family hydrolase;protein_id=WP_105996652.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 51204 51869 . - . ID=gene-RM615_RS00235;Name=RM615_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00235;old_locus_tag=RM615_00235 NZ_JAVRJW010000001.1 Protein Homology CDS 51204 51869 . - 0 ID=cds-WP_103159297.1;Parent=gene-RM615_RS00235;Dbxref=GenBank:WP_103159297.1;Name=WP_103159297.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464122.1;locus_tag=RM615_RS00235;product=deoxynucleoside kinase;protein_id=WP_103159297.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 51862 52479 . - . ID=gene-RM615_RS00240;Name=RM615_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00240;old_locus_tag=RM615_00240 NZ_JAVRJW010000001.1 Protein Homology CDS 51862 52479 . - 0 ID=cds-WP_103159298.1;Parent=gene-RM615_RS00240;Dbxref=GenBank:WP_103159298.1;Name=WP_103159298.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723522.1;locus_tag=RM615_RS00240;product=deoxynucleoside kinase;protein_id=WP_103159298.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 52547 53044 . + . ID=gene-RM615_RS00245;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=RM615_RS00245;old_locus_tag=RM615_00245 NZ_JAVRJW010000001.1 Protein Homology CDS 52547 53044 . + 0 ID=cds-WP_037572877.1;Parent=gene-RM615_RS00245;Dbxref=GenBank:WP_037572877.1;Name=WP_037572877.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455718.1;locus_tag=RM615_RS00245;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_037572877.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 53212 54081 . + . ID=gene-RM615_RS00250;Name=RM615_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00250;old_locus_tag=RM615_00250 NZ_JAVRJW010000001.1 Protein Homology CDS 53212 54081 . + 0 ID=cds-WP_107364113.1;Parent=gene-RM615_RS00250;Dbxref=GenBank:WP_107364113.1;Name=WP_107364113.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276687.1;locus_tag=RM615_RS00250;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_107364113.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 54096 54662 . + . ID=gene-RM615_RS00255;Name=RM615_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00255;old_locus_tag=RM615_00255 NZ_JAVRJW010000001.1 Protein Homology CDS 54096 54662 . + 0 ID=cds-WP_037572869.1;Parent=gene-RM615_RS00255;Dbxref=GenBank:WP_037572869.1;Name=WP_037572869.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464116.1;locus_tag=RM615_RS00255;product=NADPH-dependent FMN reductase;protein_id=WP_037572869.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 54720 55598 . - . ID=gene-RM615_RS00260;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=RM615_RS00260;old_locus_tag=RM615_00260 NZ_JAVRJW010000001.1 Protein Homology CDS 54720 55598 . - 0 ID=cds-WP_037572866.1;Parent=gene-RM615_RS00260;Dbxref=GenBank:WP_037572866.1;Name=WP_037572866.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=RM615_RS00260;product=GTP cyclohydrolase FolE2;protein_id=WP_037572866.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 55675 56364 . - . ID=gene-RM615_RS00265;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=RM615_RS00265;old_locus_tag=RM615_00265 NZ_JAVRJW010000001.1 Protein Homology CDS 55675 56364 . - 0 ID=cds-WP_037572863.1;Parent=gene-RM615_RS00265;Dbxref=GenBank:WP_037572863.1;Name=WP_037572863.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455710.1;locus_tag=RM615_RS00265;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_037572863.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 56376 56735 . - . ID=gene-RM615_RS00270;Name=RM615_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00270;old_locus_tag=RM615_00270 NZ_JAVRJW010000001.1 Protein Homology CDS 56376 56735 . - 0 ID=cds-WP_037572861.1;Parent=gene-RM615_RS00270;Dbxref=GenBank:WP_037572861.1;Name=WP_037572861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001795843.1;locus_tag=RM615_RS00270;product=YojF family protein;protein_id=WP_037572861.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 56972 57700 . + . ID=gene-RM615_RS00275;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=RM615_RS00275;old_locus_tag=RM615_00275 NZ_JAVRJW010000001.1 Protein Homology CDS 56972 57700 . + 0 ID=cds-WP_037572858.1;Parent=gene-RM615_RS00275;Dbxref=GenBank:WP_037572858.1;Name=WP_037572858.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441156.1;locus_tag=RM615_RS00275;product=glucosamine-6-phosphate deaminase;protein_id=WP_037572858.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 57784 58422 . + . ID=gene-RM615_RS00280;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=RM615_RS00280;old_locus_tag=RM615_00280 NZ_JAVRJW010000001.1 Protein Homology CDS 57784 58422 . + 0 ID=cds-WP_037572855.1;Parent=gene-RM615_RS00280;Dbxref=GenBank:WP_037572855.1;Name=WP_037572855.1;Ontology_term=GO:0005975,GO:0019649,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation|0019649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=RM615_RS00280;product=3-hexulose-6-phosphate synthase;protein_id=WP_037572855.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 58424 58969 . + . ID=gene-RM615_RS00285;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=RM615_RS00285;old_locus_tag=RM615_00285 NZ_JAVRJW010000001.1 Protein Homology CDS 58424 58969 . + 0 ID=cds-WP_105996655.1;Parent=gene-RM615_RS00285;Dbxref=GenBank:WP_105996655.1;Name=WP_105996655.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387319.1;locus_tag=RM615_RS00285;product=6-phospho-3-hexuloisomerase;protein_id=WP_105996655.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 59104 60462 . + . ID=gene-RM615_RS00290;Name=RM615_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00290;old_locus_tag=RM615_00290 NZ_JAVRJW010000001.1 Protein Homology CDS 59104 60462 . + 0 ID=cds-WP_233655890.1;Parent=gene-RM615_RS00290;Dbxref=GenBank:WP_233655890.1;Name=WP_233655890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165753.1;locus_tag=RM615_RS00290;product=AMP-binding protein;protein_id=WP_233655890.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 60455 61600 . + . ID=gene-RM615_RS00295;Name=RM615_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00295;old_locus_tag=RM615_00295 NZ_JAVRJW010000001.1 Protein Homology CDS 60455 61600 . + 0 ID=cds-WP_105996656.1;Parent=gene-RM615_RS00295;Dbxref=GenBank:WP_105996656.1;Name=WP_105996656.1;Ontology_term=GO:0006635,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508455.1;locus_tag=RM615_RS00295;product=thiolase family protein;protein_id=WP_105996656.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 61569 61925 . + . ID=gene-RM615_RS00300;Name=RM615_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00300;old_locus_tag=RM615_00300 NZ_JAVRJW010000001.1 Protein Homology CDS 61569 61925 . + 0 ID=cds-WP_311540837.1;Parent=gene-RM615_RS00300;Dbxref=GenBank:WP_311540837.1;Name=WP_311540837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055022.1;locus_tag=RM615_RS00300;product=VraC family protein;protein_id=WP_311540837.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 61925 62194 . + . ID=gene-RM615_RS00305;Name=RM615_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00305;old_locus_tag=RM615_00305 NZ_JAVRJW010000001.1 Protein Homology CDS 61925 62194 . + 0 ID=cds-WP_037572840.1;Parent=gene-RM615_RS00305;Dbxref=GenBank:WP_037572840.1;Name=WP_037572840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276670.1;locus_tag=RM615_RS00305;product=hypothetical protein;protein_id=WP_037572840.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 62454 63284 . - . ID=gene-RM615_RS00310;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM615_RS00310;old_locus_tag=RM615_00310 NZ_JAVRJW010000001.1 Protein Homology CDS 62454 63284 . - 0 ID=cds-WP_105962912.1;Parent=gene-RM615_RS00310;Dbxref=GenBank:WP_105962912.1;Name=WP_105962912.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=RM615_RS00310;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_105962912.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 63416 64084 . + . ID=gene-RM615_RS00315;Name=RM615_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00315;old_locus_tag=RM615_00315 NZ_JAVRJW010000001.1 Protein Homology CDS 63416 64084 . + 0 ID=cds-WP_037572834.1;Parent=gene-RM615_RS00315;Dbxref=GenBank:WP_037572834.1;Name=WP_037572834.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=RM615_RS00315;product=uracil-DNA glycosylase;protein_id=WP_037572834.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 64077 64421 . + . ID=gene-RM615_RS00320;Name=RM615_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00320;old_locus_tag=RM615_00320 NZ_JAVRJW010000001.1 Protein Homology CDS 64077 64421 . + 0 ID=cds-WP_103159306.1;Parent=gene-RM615_RS00320;Dbxref=GenBank:WP_103159306.1;Name=WP_103159306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=RM615_RS00320;product=DUF5327 family protein;protein_id=WP_103159306.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 64438 64800 . + . ID=gene-RM615_RS00325;Name=RM615_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00325;old_locus_tag=RM615_00325 NZ_JAVRJW010000001.1 Protein Homology CDS 64438 64800 . + 0 ID=cds-WP_037572828.1;Parent=gene-RM615_RS00325;Dbxref=GenBank:WP_037572828.1;Name=WP_037572828.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=RM615_RS00325;product=DUF423 domain-containing protein;protein_id=WP_037572828.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 64927 66378 . + . ID=gene-RM615_RS00330;Name=RM615_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00330;old_locus_tag=RM615_00330 NZ_JAVRJW010000001.1 Protein Homology CDS 64927 66378 . + 0 ID=cds-WP_311540838.1;Parent=gene-RM615_RS00330;Dbxref=GenBank:WP_311540838.1;Name=WP_311540838.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499138.1;locus_tag=RM615_RS00330;product=APC family permease;protein_id=WP_311540838.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 66582 67139 . + . ID=gene-RM615_RS00335;Name=RM615_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00335;old_locus_tag=RM615_00335 NZ_JAVRJW010000001.1 Protein Homology CDS 66582 67139 . + 0 ID=cds-WP_157946554.1;Parent=gene-RM615_RS00335;Dbxref=GenBank:WP_157946554.1;Name=WP_157946554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=RM615_RS00335;product=GNAT family N-acetyltransferase;protein_id=WP_157946554.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 67408 67965 . - . ID=gene-RM615_RS00340;Name=RM615_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00340;old_locus_tag=RM615_00340 NZ_JAVRJW010000001.1 Protein Homology CDS 67408 67965 . - 0 ID=cds-WP_105996659.1;Parent=gene-RM615_RS00340;Dbxref=GenBank:WP_105996659.1;Name=WP_105996659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167960.1;locus_tag=RM615_RS00340;product=TetR/AcrR family transcriptional regulator;protein_id=WP_105996659.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 68092 68739 . + . ID=gene-RM615_RS00345;Name=RM615_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00345;old_locus_tag=RM615_00345 NZ_JAVRJW010000001.1 Protein Homology CDS 68092 68739 . + 0 ID=cds-WP_105996660.1;Parent=gene-RM615_RS00345;Dbxref=GenBank:WP_105996660.1;Name=WP_105996660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=RM615_RS00345;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_105996660.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 68758 70506 . + . ID=gene-RM615_RS00350;Name=RM615_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00350;old_locus_tag=RM615_00350 NZ_JAVRJW010000001.1 Protein Homology CDS 68758 70506 . + 0 ID=cds-WP_037572813.1;Parent=gene-RM615_RS00350;Dbxref=GenBank:WP_037572813.1;Name=WP_037572813.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167958.1;locus_tag=RM615_RS00350;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_037572813.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 70573 71409 . - . ID=gene-RM615_RS00355;Name=RM615_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00355;old_locus_tag=RM615_00355 NZ_JAVRJW010000001.1 Protein Homology CDS 70573 71409 . - 0 ID=cds-WP_037572811.1;Parent=gene-RM615_RS00355;Dbxref=GenBank:WP_037572811.1;Name=WP_037572811.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=RM615_RS00355;product=lipoate--protein ligase family protein;protein_id=WP_037572811.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 71409 72398 . - . ID=gene-RM615_RS00360;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=RM615_RS00360;old_locus_tag=RM615_00360 NZ_JAVRJW010000001.1 Protein Homology CDS 71409 72398 . - 0 ID=cds-WP_103159310.1;Parent=gene-RM615_RS00360;Dbxref=GenBank:WP_103159310.1;Name=WP_103159310.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=RM615_RS00360;product=phosphate acetyltransferase;protein_id=WP_103159310.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 72647 73396 . + . ID=gene-RM615_RS00365;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=RM615_RS00365;old_locus_tag=RM615_00365 NZ_JAVRJW010000001.1 Protein Homology CDS 72647 73396 . + 0 ID=cds-WP_037572806.1;Parent=gene-RM615_RS00365;Dbxref=GenBank:WP_037572806.1;Name=WP_037572806.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=RM615_RS00365;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_037572806.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 73628 74974 . + . ID=gene-RM615_RS00370;Name=RM615_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00370;old_locus_tag=RM615_00370 NZ_JAVRJW010000001.1 Protein Homology CDS 73628 74974 . + 0 ID=cds-WP_037572803.1;Parent=gene-RM615_RS00370;Dbxref=GenBank:WP_037572803.1;Name=WP_037572803.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912338.1;locus_tag=RM615_RS00370;product=APC family permease;protein_id=WP_037572803.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 75053 75769 . + . ID=gene-RM615_RS00375;Name=RM615_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00375;old_locus_tag=RM615_00375 NZ_JAVRJW010000001.1 Protein Homology CDS 75053 75769 . + 0 ID=cds-WP_311540927.1;Parent=gene-RM615_RS00375;Dbxref=GenBank:WP_311540927.1;Name=WP_311540927.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166290.1;locus_tag=RM615_RS00375;product=threonine/serine exporter family protein;protein_id=WP_311540927.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 75774 76241 . + . ID=gene-RM615_RS00380;Name=RM615_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00380;old_locus_tag=RM615_00380 NZ_JAVRJW010000001.1 Protein Homology CDS 75774 76241 . + 0 ID=cds-WP_037572799.1;Parent=gene-RM615_RS00380;Dbxref=GenBank:WP_037572799.1;Name=WP_037572799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303973.1;locus_tag=RM615_RS00380;product=threonine/serine exporter family protein;protein_id=WP_037572799.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 76944 78485 . + . ID=gene-RM615_RS00385;Name=RM615_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00385;old_locus_tag=RM615_00385 NZ_JAVRJW010000001.1 Protein Homology CDS 76944 78485 . + 0 ID=cds-WP_373368836.1;Parent=gene-RM615_RS00385;Dbxref=GenBank:WP_373368836.1;Name=WP_373368836.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509151.1;locus_tag=RM615_RS00385;product=SLC13 family permease;protein_id=WP_373368836.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 78607 78954 . + . ID=gene-RM615_RS00390;Name=RM615_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00390;old_locus_tag=RM615_00390 NZ_JAVRJW010000001.1 Protein Homology CDS 78607 78954 . + 0 ID=cds-WP_037572793.1;Parent=gene-RM615_RS00390;Dbxref=GenBank:WP_037572793.1;Name=WP_037572793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=RM615_RS00390;product=YuzB family protein;protein_id=WP_037572793.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 79343 79882 . + . ID=gene-RM615_RS00395;Name=RM615_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00395;old_locus_tag=RM615_00395 NZ_JAVRJW010000001.1 Protein Homology CDS 79343 79882 . + 0 ID=cds-WP_105996661.1;Parent=gene-RM615_RS00395;Dbxref=GenBank:WP_105996661.1;Name=WP_105996661.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176045.1;locus_tag=RM615_RS00395;product=flavodoxin family protein;protein_id=WP_105996661.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 80050 80532 . + . ID=gene-RM615_RS00400;Name=RM615_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00400;old_locus_tag=RM615_00400 NZ_JAVRJW010000001.1 Protein Homology CDS 80050 80532 . + 0 ID=cds-WP_037572788.1;Parent=gene-RM615_RS00400;Dbxref=GenBank:WP_037572788.1;Name=WP_037572788.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=RM615_RS00400;product=GNAT family N-acetyltransferase;protein_id=WP_037572788.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 80554 81855 . + . ID=gene-RM615_RS00405;Name=RM615_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00405;old_locus_tag=RM615_00405 NZ_JAVRJW010000001.1 Protein Homology CDS 80554 81855 . + 0 ID=cds-WP_037572785.1;Parent=gene-RM615_RS00405;Dbxref=GenBank:WP_037572785.1;Name=WP_037572785.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=RM615_RS00405;product=HD domain-containing protein;protein_id=WP_037572785.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 81879 82385 . + . ID=gene-RM615_RS00410;Name=RM615_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00410;old_locus_tag=RM615_00410 NZ_JAVRJW010000001.1 Protein Homology CDS 81879 82385 . + 0 ID=cds-WP_037572782.1;Parent=gene-RM615_RS00410;Dbxref=GenBank:WP_037572782.1;Name=WP_037572782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384646.1;locus_tag=RM615_RS00410;product=YwhD family protein;protein_id=WP_037572782.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 82496 82921 . + . ID=gene-RM615_RS00415;Name=RM615_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00415;old_locus_tag=RM615_00415 NZ_JAVRJW010000001.1 Protein Homology CDS 82496 82921 . + 0 ID=cds-WP_037572779.1;Parent=gene-RM615_RS00415;Dbxref=GenBank:WP_037572779.1;Name=WP_037572779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359087.1;locus_tag=RM615_RS00415;product=YwiB family protein;protein_id=WP_037572779.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 82908 84566 . + . ID=gene-RM615_RS00420;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=RM615_RS00420;old_locus_tag=RM615_00420 NZ_JAVRJW010000001.1 Protein Homology CDS 82908 84566 . + 0 ID=cds-WP_037572777.1;Parent=gene-RM615_RS00420;Dbxref=GenBank:WP_037572777.1;Name=WP_037572777.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=RM615_RS00420;product=arginine--tRNA ligase;protein_id=WP_037572777.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 84727 85611 . + . ID=gene-RM615_RS00425;Name=RM615_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00425;old_locus_tag=RM615_00425 NZ_JAVRJW010000001.1 Protein Homology CDS 84727 85611 . + 0 ID=cds-WP_105996662.1;Parent=gene-RM615_RS00425;Dbxref=GenBank:WP_105996662.1;Name=WP_105996662.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=RM615_RS00425;product=ABC transporter substrate-binding protein;protein_id=WP_105996662.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 85598 86563 . + . ID=gene-RM615_RS00430;Name=RM615_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00430;old_locus_tag=RM615_00430 NZ_JAVRJW010000001.1 Protein Homology CDS 85598 86563 . + 0 ID=cds-WP_233655888.1;Parent=gene-RM615_RS00430;Dbxref=GenBank:WP_233655888.1;Name=WP_233655888.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=RM615_RS00430;product=FecCD family ABC transporter permease;protein_id=WP_233655888.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 86660 87364 . + . ID=gene-RM615_RS00435;Name=RM615_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00435;old_locus_tag=RM615_00435 NZ_JAVRJW010000001.1 Protein Homology CDS 86660 87364 . + 0 ID=cds-WP_105965110.1;Parent=gene-RM615_RS00435;Dbxref=GenBank:WP_105965110.1;Name=WP_105965110.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=RM615_RS00435;product=HAD family hydrolase;protein_id=WP_105965110.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 87364 88161 . + . ID=gene-RM615_RS00440;Name=RM615_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00440;old_locus_tag=RM615_00440 NZ_JAVRJW010000001.1 Protein Homology CDS 87364 88161 . + 0 ID=cds-WP_105965111.1;Parent=gene-RM615_RS00440;Dbxref=GenBank:WP_105965111.1;Name=WP_105965111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484047.1;locus_tag=RM615_RS00440;product=alpha/beta fold hydrolase;protein_id=WP_105965111.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 88254 88760 . + . ID=gene-RM615_RS00445;Name=RM615_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00445;old_locus_tag=RM615_00445 NZ_JAVRJW010000001.1 Protein Homology CDS 88254 88760 . + 0 ID=cds-WP_105962918.1;Parent=gene-RM615_RS00445;Dbxref=GenBank:WP_105962918.1;Name=WP_105962918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=RM615_RS00445;product=SA0570 family protein;protein_id=WP_105962918.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 88924 89640 . + . ID=gene-RM615_RS00450;Name=RM615_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00450;old_locus_tag=RM615_00450 NZ_JAVRJW010000001.1 Protein Homology CDS 88924 89640 . + 0 ID=cds-WP_037572763.1;Parent=gene-RM615_RS00450;Dbxref=GenBank:WP_037572763.1;Name=WP_037572763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898709.1;locus_tag=RM615_RS00450;product=hypothetical protein;protein_id=WP_037572763.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 89798 90580 . + . ID=gene-RM615_RS00455;Name=RM615_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00455;old_locus_tag=RM615_00455 NZ_JAVRJW010000001.1 Protein Homology CDS 89798 90580 . + 0 ID=cds-WP_105996664.1;Parent=gene-RM615_RS00455;Dbxref=GenBank:WP_105996664.1;Name=WP_105996664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.7;locus_tag=RM615_RS00455;product=alpha/beta fold hydrolase;protein_id=WP_105996664.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 90761 91132 . - . ID=gene-RM615_RS00460;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=RM615_RS00460;old_locus_tag=RM615_00460 NZ_JAVRJW010000001.1 Protein Homology CDS 90761 91132 . - 0 ID=cds-WP_037566374.1;Parent=gene-RM615_RS00460;Dbxref=GenBank:WP_037566374.1;Name=WP_037566374.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=RM615_RS00460;product=global transcriptional regulator SarA;protein_id=WP_037566374.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 91482 92396 . - . ID=gene-RM615_RS00465;Name=RM615_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00465;old_locus_tag=RM615_00465 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 91482 92396 . - 0 ID=cds-WP_037572758.1;Parent=gene-RM615_RS00465;Dbxref=GenBank:WP_037572758.1;Name=WP_037572758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS00465;product=hypothetical protein;protein_id=WP_037572758.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 92757 93680 . - . ID=gene-RM615_RS00470;Name=RM615_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00470;old_locus_tag=RM615_00470 NZ_JAVRJW010000001.1 Protein Homology CDS 92757 93680 . - 0 ID=cds-WP_037572757.1;Parent=gene-RM615_RS00470;Dbxref=GenBank:WP_037572757.1;Name=WP_037572757.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=RM615_RS00470;product=DMT family transporter;protein_id=WP_037572757.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 93914 94099 . + . ID=gene-RM615_RS00475;Name=RM615_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00475;old_locus_tag=RM615_00475 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 93914 94099 . + 0 ID=cds-WP_051604942.1;Parent=gene-RM615_RS00475;Dbxref=GenBank:WP_051604942.1;Name=WP_051604942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS00475;product=hypothetical protein;protein_id=WP_051604942.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 94553 94768 . - . ID=gene-RM615_RS00480;Name=RM615_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00480;old_locus_tag=RM615_00480 NZ_JAVRJW010000001.1 Protein Homology CDS 94553 94768 . - 0 ID=cds-WP_037572755.1;Parent=gene-RM615_RS00480;Dbxref=GenBank:WP_037572755.1;Name=WP_037572755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424369.1;locus_tag=RM615_RS00480;product=DUF2922 domain-containing protein;protein_id=WP_037572755.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 94783 94986 . - . ID=gene-RM615_RS00485;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=RM615_RS00485;old_locus_tag=RM615_00485 NZ_JAVRJW010000001.1 Protein Homology CDS 94783 94986 . - 0 ID=cds-WP_037572754.1;Parent=gene-RM615_RS00485;Dbxref=GenBank:WP_037572754.1;Name=WP_037572754.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=RM615_RS00485;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_037572754.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 95131 95682 . + . ID=gene-RM615_RS00490;Name=RM615_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00490;old_locus_tag=RM615_00490 NZ_JAVRJW010000001.1 Protein Homology CDS 95131 95682 . + 0 ID=cds-WP_037572752.1;Parent=gene-RM615_RS00490;Dbxref=GenBank:WP_037572752.1;Name=WP_037572752.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=RM615_RS00490;product=tyrosine-type recombinase/integrase;protein_id=WP_037572752.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 95708 98092 . + . ID=gene-RM615_RS00495;Name=RM615_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00495;old_locus_tag=RM615_00495 NZ_JAVRJW010000001.1 Protein Homology CDS 95708 98092 . + 0 ID=cds-WP_037572750.1;Parent=gene-RM615_RS00495;Dbxref=GenBank:WP_037572750.1;Name=WP_037572750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276534.1;locus_tag=RM615_RS00495;product=DUF4040 family protein;protein_id=WP_037572750.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 98079 98504 . + . ID=gene-RM615_RS00500;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=RM615_RS00500;old_locus_tag=RM615_00500 NZ_JAVRJW010000001.1 Protein Homology CDS 98079 98504 . + 0 ID=cds-WP_037572748.1;Parent=gene-RM615_RS00500;Dbxref=GenBank:WP_037572748.1;Name=WP_037572748.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=RM615_RS00500;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WP_037572748.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 98501 98845 . + . ID=gene-RM615_RS00505;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=RM615_RS00505;old_locus_tag=RM615_00505 NZ_JAVRJW010000001.1 Protein Homology CDS 98501 98845 . + 0 ID=cds-WP_037572746.1;Parent=gene-RM615_RS00505;Dbxref=GenBank:WP_037572746.1;Name=WP_037572746.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441278.1;locus_tag=RM615_RS00505;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_037572746.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 98838 100340 . + . ID=gene-RM615_RS00510;Name=RM615_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00510;old_locus_tag=RM615_00510 NZ_JAVRJW010000001.1 Protein Homology CDS 98838 100340 . + 0 ID=cds-WP_311540839.1;Parent=gene-RM615_RS00510;Dbxref=GenBank:WP_311540839.1;Name=WP_311540839.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499190.1;locus_tag=RM615_RS00510;product=Na+/H+ antiporter subunit D;protein_id=WP_311540839.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 100337 100819 . + . ID=gene-RM615_RS00515;Name=RM615_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00515;old_locus_tag=RM615_00515 NZ_JAVRJW010000001.1 Protein Homology CDS 100337 100819 . + 0 ID=cds-WP_037572741.1;Parent=gene-RM615_RS00515;Dbxref=GenBank:WP_037572741.1;Name=WP_037572741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071971.1;locus_tag=RM615_RS00515;product=Na+/H+ antiporter subunit E;protein_id=WP_037572741.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 100816 101118 . + . ID=gene-RM615_RS00520;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=RM615_RS00520;old_locus_tag=RM615_00520 NZ_JAVRJW010000001.1 Protein Homology CDS 100816 101118 . + 0 ID=cds-WP_037572739.1;Parent=gene-RM615_RS00520;Dbxref=GenBank:WP_037572739.1;Name=WP_037572739.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276529.1;locus_tag=RM615_RS00520;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WP_037572739.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 101093 101536 . + . ID=gene-RM615_RS00525;Name=RM615_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00525;old_locus_tag=RM615_00525 NZ_JAVRJW010000001.1 Protein Homology CDS 101093 101536 . + 0 ID=cds-WP_103159317.1;Parent=gene-RM615_RS00525;Dbxref=GenBank:WP_103159317.1;Name=WP_103159317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424378.1;locus_tag=RM615_RS00525;product=Na+/H+ antiporter subunit G;protein_id=WP_103159317.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 102121 103035 . - . ID=gene-RM615_RS00530;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=RM615_RS00530;old_locus_tag=RM615_00530 NZ_JAVRJW010000001.1 Protein Homology CDS 102121 103035 . - 0 ID=cds-WP_037573086.1;Parent=gene-RM615_RS00530;Dbxref=GenBank:WP_037573086.1;Name=WP_037573086.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737654.1;locus_tag=RM615_RS00530;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_037573086.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 103035 103874 . - . ID=gene-RM615_RS00535;Name=RM615_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00535;old_locus_tag=RM615_00535 NZ_JAVRJW010000001.1 Protein Homology CDS 103035 103874 . - 0 ID=cds-WP_037572735.1;Parent=gene-RM615_RS00535;Dbxref=GenBank:WP_037572735.1;Name=WP_037572735.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=RM615_RS00535;product=metal ABC transporter permease;protein_id=WP_037572735.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 103849 104625 . - . ID=gene-RM615_RS00540;Name=RM615_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00540;old_locus_tag=RM615_00540 NZ_JAVRJW010000001.1 Protein Homology CDS 103849 104625 . - 0 ID=cds-WP_037572733.1;Parent=gene-RM615_RS00540;Dbxref=GenBank:WP_037572733.1;Name=WP_037572733.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424381.1;locus_tag=RM615_RS00540;product=metal ABC transporter ATP-binding protein;protein_id=WP_037572733.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 104746 105396 . + . ID=gene-RM615_RS00545;Name=RM615_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00545;old_locus_tag=RM615_00545 NZ_JAVRJW010000001.1 Protein Homology CDS 104746 105396 . + 0 ID=cds-WP_311540840.1;Parent=gene-RM615_RS00545;Dbxref=GenBank:WP_311540840.1;Name=WP_311540840.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459837.1;locus_tag=RM615_RS00545;product=metal-dependent transcriptional regulator;protein_id=WP_311540840.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 105903 106649 . - . ID=gene-RM615_RS00550;Name=RM615_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00550;old_locus_tag=RM615_00550 NZ_JAVRJW010000001.1 Protein Homology CDS 105903 106649 . - 0 ID=cds-WP_037572729.1;Parent=gene-RM615_RS00550;Dbxref=GenBank:WP_037572729.1;Name=WP_037572729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424383.1;locus_tag=RM615_RS00550;product=M50 family metallopeptidase;protein_id=WP_037572729.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 106744 106886 . - . ID=gene-RM615_RS11150;Name=RM615_RS11150;end_range=106886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11150;partial=true;pseudo=true;start_range=.,106744 NZ_JAVRJW010000001.1 Protein Homology CDS 106744 106886 . - 0 ID=cds-RM615_RS11150;Parent=gene-RM615_RS11150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=106886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009012.1;locus_tag=RM615_RS11150;partial=true;product=DapH/DapD/GlmU-related protein;pseudo=true;start_range=.,106744;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 107168 107275 . - . ID=gene-RM615_RS00560;Name=RM615_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00560;old_locus_tag=RM615_00560 NZ_JAVRJW010000001.1 Protein Homology CDS 107168 107275 . - 0 ID=cds-WP_105962920.1;Parent=gene-RM615_RS00560;Dbxref=GenBank:WP_105962920.1;Name=WP_105962920.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: protein motif:HMM:NF023880.7;locus_tag=RM615_RS00560;product=maltose acetyltransferase domain-containing protein;protein_id=WP_105962920.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 107568 108338 . + . ID=gene-RM615_RS00565;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=RM615_RS00565;old_locus_tag=RM615_00565 NZ_JAVRJW010000001.1 Protein Homology CDS 107568 108338 . + 0 ID=cds-WP_037573084.1;Parent=gene-RM615_RS00565;Dbxref=GenBank:WP_037573084.1;Name=WP_037573084.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424384.1;locus_tag=RM615_RS00565;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_037573084.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 108492 109286 . - . ID=gene-RM615_RS00570;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=RM615_RS00570;old_locus_tag=RM615_00570 NZ_JAVRJW010000001.1 Protein Homology CDS 108492 109286 . - 0 ID=cds-WP_037572727.1;Parent=gene-RM615_RS00570;Dbxref=GenBank:WP_037572727.1;Name=WP_037572727.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=RM615_RS00570;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_037572727.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 109687 110490 . + . ID=gene-RM615_RS00575;Name=RM615_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00575;old_locus_tag=RM615_00575 NZ_JAVRJW010000001.1 Protein Homology CDS 109687 110490 . + 0 ID=cds-WP_037573082.1;Parent=gene-RM615_RS00575;Dbxref=GenBank:WP_037573082.1;Name=WP_037573082.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=RM615_RS00575;product=ABC transporter permease;protein_id=WP_037573082.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 110670 111761 . + . ID=gene-RM615_RS00580;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=RM615_RS00580;old_locus_tag=RM615_00580 NZ_JAVRJW010000001.1 Protein Homology CDS 110670 111761 . + 0 ID=cds-WP_311540841.1;Parent=gene-RM615_RS00580;Dbxref=GenBank:WP_311540841.1;Name=WP_311540841.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=RM615_RS00580;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_311540841.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 111905 112303 . + . ID=gene-RM615_RS00585;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=RM615_RS00585;old_locus_tag=RM615_00585 NZ_JAVRJW010000001.1 Protein Homology CDS 111905 112303 . + 0 ID=cds-WP_037572723.1;Parent=gene-RM615_RS00585;Dbxref=GenBank:WP_037572723.1;Name=WP_037572723.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=RM615_RS00585;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_037572723.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 112353 113636 . - . ID=gene-RM615_RS00590;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=RM615_RS00590;old_locus_tag=RM615_00590 NZ_JAVRJW010000001.1 Protein Homology CDS 112353 113636 . - 0 ID=cds-WP_103159322.1;Parent=gene-RM615_RS00590;Dbxref=GenBank:WP_103159322.1;Name=WP_103159322.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499206.1;locus_tag=RM615_RS00590;product=penicillin-binding protein PBP4;protein_id=WP_103159322.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 113894 115618 . + . ID=gene-RM615_RS00595;Name=RM615_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00595;old_locus_tag=RM615_00595 NZ_JAVRJW010000001.1 Protein Homology CDS 113894 115618 . + 0 ID=cds-WP_105996667.1;Parent=gene-RM615_RS00595;Dbxref=GenBank:WP_105996667.1;Name=WP_105996667.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=RM615_RS00595;product=ABC transporter ATP-binding protein;protein_id=WP_105996667.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 115669 115830 . - . ID=gene-RM615_RS00600;Name=RM615_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00600;old_locus_tag=RM615_00600 NZ_JAVRJW010000001.1 Protein Homology CDS 115669 115830 . - 0 ID=cds-WP_037572717.1;Parent=gene-RM615_RS00600;Dbxref=GenBank:WP_037572717.1;Name=WP_037572717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424391.1;locus_tag=RM615_RS00600;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_037572717.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 115842 117836 . - . ID=gene-RM615_RS00605;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=RM615_RS00605;old_locus_tag=RM615_00605 NZ_JAVRJW010000001.1 Protein Homology CDS 115842 117836 . - 0 ID=cds-WP_103159323.1;Parent=gene-RM615_RS00605;Dbxref=GenBank:WP_103159323.1;Name=WP_103159323.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424392.1;locus_tag=RM615_RS00605;product=ferrous iron transport protein B;protein_id=WP_103159323.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 117829 118065 . - . ID=gene-RM615_RS00610;Name=RM615_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00610;old_locus_tag=RM615_00610 NZ_JAVRJW010000001.1 Protein Homology CDS 117829 118065 . - 0 ID=cds-WP_103159324.1;Parent=gene-RM615_RS00610;Dbxref=GenBank:WP_103159324.1;Name=WP_103159324.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614614.1;locus_tag=RM615_RS00610;product=FeoA family protein;protein_id=WP_103159324.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 118336 119562 . + . ID=gene-RM615_RS00615;Name=RM615_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00615;old_locus_tag=RM615_00615 NZ_JAVRJW010000001.1 Protein Homology CDS 118336 119562 . + 0 ID=cds-WP_105962924.1;Parent=gene-RM615_RS00615;Dbxref=GenBank:WP_105962924.1;Name=WP_105962924.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=RM615_RS00615;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_105962924.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 120115 120948 . + . ID=gene-RM615_RS00620;Name=RM615_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00620;old_locus_tag=RM615_00620 NZ_JAVRJW010000001.1 Protein Homology CDS 120115 120948 . + 0 ID=cds-WP_037572705.1;Parent=gene-RM615_RS00620;Dbxref=GenBank:WP_037572705.1;Name=WP_037572705.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=RM615_RS00620;product=YitT family protein;protein_id=WP_037572705.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 121222 122028 . + . ID=gene-RM615_RS00625;Name=RM615_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00625;old_locus_tag=RM615_00625 NZ_JAVRJW010000001.1 Protein Homology CDS 121222 122028 . + 0 ID=cds-WP_103159326.1;Parent=gene-RM615_RS00625;Dbxref=GenBank:WP_103159326.1;Name=WP_103159326.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722609.1;locus_tag=RM615_RS00625;product=ABC transporter ATP-binding protein;protein_id=WP_103159326.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 122093 123052 . + . ID=gene-RM615_RS00630;Name=RM615_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00630;old_locus_tag=RM615_00630 NZ_JAVRJW010000001.1 Protein Homology CDS 122093 123052 . + 0 ID=cds-WP_051604946.1;Parent=gene-RM615_RS00630;Dbxref=GenBank:WP_051604946.1;Name=WP_051604946.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508382.1;locus_tag=RM615_RS00630;product=FecCD family ABC transporter permease;protein_id=WP_051604946.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 123049 124065 . + . ID=gene-RM615_RS00635;Name=RM615_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00635;old_locus_tag=RM615_00635 NZ_JAVRJW010000001.1 Protein Homology CDS 123049 124065 . + 0 ID=cds-WP_311540842.1;Parent=gene-RM615_RS00635;Dbxref=GenBank:WP_311540842.1;Name=WP_311540842.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=RM615_RS00635;product=FecCD family ABC transporter permease;protein_id=WP_311540842.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 124231 124731 . + . ID=gene-RM615_RS00640;Name=RM615_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00640;old_locus_tag=RM615_00640 NZ_JAVRJW010000001.1 Protein Homology CDS 124231 124731 . + 0 ID=cds-WP_037572694.1;Parent=gene-RM615_RS00640;Dbxref=GenBank:WP_037572694.1;Name=WP_037572694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490528.1;locus_tag=RM615_RS00640;product=hypothetical protein;protein_id=WP_037572694.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 124920 126359 . + . ID=gene-RM615_RS00645;Name=RM615_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00645;old_locus_tag=RM615_00645 NZ_JAVRJW010000001.1 Protein Homology CDS 124920 126359 . + 0 ID=cds-WP_105996668.1;Parent=gene-RM615_RS00645;Dbxref=GenBank:WP_105996668.1;Name=WP_105996668.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166211.1;locus_tag=RM615_RS00645;product=MDR family MFS transporter;protein_id=WP_105996668.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 126600 127667 . + . ID=gene-RM615_RS00650;Name=RM615_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00650;old_locus_tag=RM615_00650 NZ_JAVRJW010000001.1 Protein Homology CDS 126600 127667 . + 0 ID=cds-WP_037572688.1;Parent=gene-RM615_RS00650;Dbxref=GenBank:WP_037572688.1;Name=WP_037572688.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=RM615_RS00650;product=YkvI family membrane protein;protein_id=WP_037572688.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 127710 128750 . + . ID=gene-RM615_RS00655;Name=RM615_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00655;old_locus_tag=RM615_00655 NZ_JAVRJW010000001.1 Protein Homology CDS 127710 128750 . + 0 ID=cds-WP_037572686.1;Parent=gene-RM615_RS00655;Dbxref=GenBank:WP_037572686.1;Name=WP_037572686.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=RM615_RS00655;product=alpha/beta hydrolase;protein_id=WP_037572686.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 128980 129486 . - . ID=gene-RM615_RS00660;Name=RM615_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00660;old_locus_tag=RM615_00660 NZ_JAVRJW010000001.1 Protein Homology CDS 128980 129486 . - 0 ID=cds-WP_037572684.1;Parent=gene-RM615_RS00660;Dbxref=GenBank:WP_037572684.1;Name=WP_037572684.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=RM615_RS00660;product=GNAT family N-acetyltransferase;protein_id=WP_037572684.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 129599 130546 . + . ID=gene-RM615_RS00665;Name=RM615_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00665;old_locus_tag=RM615_00665 NZ_JAVRJW010000001.1 Protein Homology CDS 129599 130546 . + 0 ID=cds-WP_037572682.1;Parent=gene-RM615_RS00665;Dbxref=GenBank:WP_037572682.1;Name=WP_037572682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424404.1;locus_tag=RM615_RS00665;product=NAD(P)H-binding protein;protein_id=WP_037572682.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 131059 131676 . + . ID=gene-RM615_RS00670;Name=RM615_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00670;old_locus_tag=RM615_00670 NZ_JAVRJW010000001.1 Protein Homology CDS 131059 131676 . + 0 ID=cds-WP_037572680.1;Parent=gene-RM615_RS00670;Dbxref=GenBank:WP_037572680.1;Name=WP_037572680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=RM615_RS00670;product=DUF47 domain-containing protein;protein_id=WP_037572680.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 131691 132692 . + . ID=gene-RM615_RS00675;Name=RM615_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00675;old_locus_tag=RM615_00675 NZ_JAVRJW010000001.1 Protein Homology CDS 131691 132692 . + 0 ID=cds-WP_037572676.1;Parent=gene-RM615_RS00675;Dbxref=GenBank:WP_037572676.1;Name=WP_037572676.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=RM615_RS00675;product=inorganic phosphate transporter;protein_id=WP_037572676.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 132919 133740 . - . ID=gene-RM615_RS00680;Name=RM615_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00680;old_locus_tag=RM615_00680 NZ_JAVRJW010000001.1 Protein Homology CDS 132919 133740 . - 0 ID=cds-WP_037572675.1;Parent=gene-RM615_RS00680;Dbxref=GenBank:WP_037572675.1;Name=WP_037572675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303705.1;locus_tag=RM615_RS00680;product=CHAP domain-containing protein;protein_id=WP_037572675.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 134022 134657 . + . ID=gene-RM615_RS00685;Name=RM615_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00685;old_locus_tag=RM615_00685 NZ_JAVRJW010000001.1 Protein Homology CDS 134022 134657 . + 0 ID=cds-WP_233654974.1;Parent=gene-RM615_RS00685;Dbxref=GenBank:WP_233654974.1;Name=WP_233654974.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472547.1;locus_tag=RM615_RS00685;product=Bax inhibitor-1/YccA family protein;protein_id=WP_233654974.1;transl_table=11 NZ_JAVRJW010000001.1 cmsearch riboswitch 134672 134780 . + . ID=id-NZ_JAVRJW010000001.1:134672..134780;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000001.1 RefSeq gene 134839 135438 . + . ID=gene-RM615_RS00690;Name=RM615_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00690;old_locus_tag=RM615_00690 NZ_JAVRJW010000001.1 Protein Homology CDS 134839 135438 . + 0 ID=cds-WP_311540843.1;Parent=gene-RM615_RS00690;Dbxref=GenBank:WP_311540843.1;Name=WP_311540843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424424.1;locus_tag=RM615_RS00690;product=thiamine phosphate synthase;protein_id=WP_311540843.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 135422 135622 . + . ID=gene-RM615_RS00695;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=RM615_RS00695;old_locus_tag=RM615_00695 NZ_JAVRJW010000001.1 Protein Homology CDS 135422 135622 . + 0 ID=cds-WP_105965123.1;Parent=gene-RM615_RS00695;Dbxref=GenBank:WP_105965123.1;Name=WP_105965123.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009036520.1;locus_tag=RM615_RS00695;product=sulfur carrier protein ThiS;protein_id=WP_105965123.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 135624 136391 . + . ID=gene-RM615_RS00700;Name=RM615_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00700;old_locus_tag=RM615_00700 NZ_JAVRJW010000001.1 Protein Homology CDS 135624 136391 . + 0 ID=cds-WP_037572670.1;Parent=gene-RM615_RS00700;Dbxref=GenBank:WP_037572670.1;Name=WP_037572670.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728710.1;locus_tag=RM615_RS00700;product=thiazole synthase;protein_id=WP_037572670.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 136391 137398 . + . ID=gene-RM615_RS00705;Name=RM615_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00705;old_locus_tag=RM615_00705 NZ_JAVRJW010000001.1 Protein Homology CDS 136391 137398 . + 0 ID=cds-WP_105996669.1;Parent=gene-RM615_RS00705;Dbxref=GenBank:WP_105996669.1;Name=WP_105996669.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=RM615_RS00705;product=ThiF family adenylyltransferase;protein_id=WP_105996669.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 137463 138176 . + . ID=gene-RM615_RS00710;Name=RM615_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00710;old_locus_tag=RM615_00710 NZ_JAVRJW010000001.1 Protein Homology CDS 137463 138176 . + 0 ID=cds-WP_105996670.1;Parent=gene-RM615_RS00710;Dbxref=GenBank:WP_105996670.1;Name=WP_105996670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424428.1;locus_tag=RM615_RS00710;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_105996670.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 138393 138971 . + . ID=gene-RM615_RS00715;Name=RM615_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00715;old_locus_tag=RM615_00715 NZ_JAVRJW010000001.1 Protein Homology CDS 138393 138971 . + 0 ID=cds-WP_375712991.1;Parent=gene-RM615_RS00715;Dbxref=GenBank:WP_375712991.1;Name=WP_375712991.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=RM615_RS00715;product=ribonuclease FAU-1 family protein;protein_id=WP_375712991.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 139059 139925 . + . ID=gene-RM615_RS00720;Name=RM615_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00720;old_locus_tag=RM615_00720 NZ_JAVRJW010000001.1 Protein Homology CDS 139059 139925 . + 0 ID=cds-WP_037572662.1;Parent=gene-RM615_RS00720;Dbxref=GenBank:WP_037572662.1;Name=WP_037572662.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687413.1;locus_tag=RM615_RS00720;product=LysR family transcriptional regulator;protein_id=WP_037572662.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 139944 141146 . + . ID=gene-RM615_RS00725;Name=RM615_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00725;old_locus_tag=RM615_00725 NZ_JAVRJW010000001.1 Protein Homology CDS 139944 141146 . + 0 ID=cds-WP_037572660.1;Parent=gene-RM615_RS00725;Dbxref=GenBank:WP_037572660.1;Name=WP_037572660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383172.1;locus_tag=RM615_RS00725;product=sugar efflux transporter;protein_id=WP_037572660.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 141165 141653 . + . ID=gene-RM615_RS00730;Name=RM615_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00730;old_locus_tag=RM615_00730 NZ_JAVRJW010000001.1 Protein Homology CDS 141165 141653 . + 0 ID=cds-WP_037572658.1;Parent=gene-RM615_RS00730;Dbxref=GenBank:WP_037572658.1;Name=WP_037572658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187125.1;locus_tag=RM615_RS00730;product=DUF456 domain-containing protein;protein_id=WP_037572658.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 141856 142560 . - . ID=gene-RM615_RS00735;Name=RM615_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00735;old_locus_tag=RM615_00735 NZ_JAVRJW010000001.1 Protein Homology CDS 141856 142560 . - 0 ID=cds-WP_103159333.1;Parent=gene-RM615_RS00735;Dbxref=GenBank:WP_103159333.1;Name=WP_103159333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=RM615_RS00735;product=DUF1129 family protein;protein_id=WP_103159333.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 142652 143101 . + . ID=gene-RM615_RS00740;Name=RM615_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00740;old_locus_tag=RM615_00740 NZ_JAVRJW010000001.1 Protein Homology CDS 142652 143101 . + 0 ID=cds-WP_105965335.1;Parent=gene-RM615_RS00740;Dbxref=GenBank:WP_105965335.1;Name=WP_105965335.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF025054.7;locus_tag=RM615_RS00740;product=GNAT family N-acetyltransferase;protein_id=WP_105965335.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 143166 143492 . + . ID=gene-RM615_RS00745;Name=RM615_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00745;old_locus_tag=RM615_00745 NZ_JAVRJW010000001.1 Protein Homology CDS 143166 143492 . + 0 ID=cds-WP_233650031.1;Parent=gene-RM615_RS00745;Dbxref=GenBank:WP_233650031.1;Name=WP_233650031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166187.1;locus_tag=RM615_RS00745;product=SA0632 family lipoprotein;protein_id=WP_233650031.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 143593 143892 . + . ID=gene-RM615_RS00750;Name=RM615_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00750;old_locus_tag=RM615_00750 NZ_JAVRJW010000001.1 Protein Homology CDS 143593 143892 . + 0 ID=cds-WP_037572650.1;Parent=gene-RM615_RS00750;Dbxref=GenBank:WP_037572650.1;Name=WP_037572650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=RM615_RS00750;product=hypothetical protein;protein_id=WP_037572650.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 143986 144528 . + . ID=gene-RM615_RS00755;Name=RM615_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00755;old_locus_tag=RM615_00755 NZ_JAVRJW010000001.1 Protein Homology CDS 143986 144528 . + 0 ID=cds-WP_105996672.1;Parent=gene-RM615_RS00755;Dbxref=GenBank:WP_105996672.1;Name=WP_105996672.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481469.1;locus_tag=RM615_RS00755;product=GNAT family N-acetyltransferase;protein_id=WP_105996672.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 144567 145133 . - . ID=gene-RM615_RS00760;Name=RM615_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00760;old_locus_tag=RM615_00760 NZ_JAVRJW010000001.1 Protein Homology CDS 144567 145133 . - 0 ID=cds-WP_037573069.1;Parent=gene-RM615_RS00760;Dbxref=GenBank:WP_037573069.1;Name=WP_037573069.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=RM615_RS00760;product=LOG family protein;protein_id=WP_037573069.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 145133 145594 . - . ID=gene-RM615_RS00765;Name=RM615_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00765;old_locus_tag=RM615_00765 NZ_JAVRJW010000001.1 Protein Homology CDS 145133 145594 . - 0 ID=cds-WP_105996673.1;Parent=gene-RM615_RS00765;Dbxref=GenBank:WP_105996673.1;Name=WP_105996673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499248.1;locus_tag=RM615_RS00765;product=YaiI/YqxD family protein;protein_id=WP_105996673.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 145596 146903 . - . ID=gene-RM615_RS11235;Name=RM615_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11235 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 145596 146903 . - 0 ID=cds-WP_069191673.1;Parent=gene-RM615_RS11235;Dbxref=GenBank:WP_069191673.1;Name=WP_069191673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS11235;product=hypothetical protein;protein_id=WP_069191673.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 147260 147616 . - . ID=gene-RM615_RS00775;Name=RM615_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00775;old_locus_tag=RM615_00775 NZ_JAVRJW010000001.1 Protein Homology CDS 147260 147616 . - 0 ID=cds-WP_037572641.1;Parent=gene-RM615_RS00775;Dbxref=GenBank:WP_037572641.1;Name=WP_037572641.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499528.1;locus_tag=RM615_RS00775;product=DoxX family protein;protein_id=WP_037572641.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 147654 148295 . - . ID=gene-RM615_RS00780;Name=RM615_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00780;old_locus_tag=RM615_00780 NZ_JAVRJW010000001.1 Protein Homology CDS 147654 148295 . - 0 ID=cds-WP_311540844.1;Parent=gene-RM615_RS00780;Dbxref=GenBank:WP_311540844.1;Name=WP_311540844.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168913.1;locus_tag=RM615_RS00780;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311540844.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 148601 149455 . - . ID=gene-RM615_RS00785;Name=RM615_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00785;old_locus_tag=RM615_00785 NZ_JAVRJW010000001.1 Protein Homology CDS 148601 149455 . - 0 ID=cds-WP_105962933.1;Parent=gene-RM615_RS00785;Dbxref=GenBank:WP_105962933.1;Name=WP_105962933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=RM615_RS00785;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_105962933.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 149702 151306 . + . ID=gene-RM615_RS00790;Name=RM615_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00790;old_locus_tag=RM615_00790 NZ_JAVRJW010000001.1 Protein Homology CDS 149702 151306 . + 0 ID=cds-WP_105996675.1;Parent=gene-RM615_RS00790;Dbxref=GenBank:WP_105996675.1;Name=WP_105996675.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=L-cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737167.1;locus_tag=RM615_RS00790;product=ABC transporter ATP-binding protein/permease;protein_id=WP_105996675.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 151363 153006 . + . ID=gene-RM615_RS00795;Name=RM615_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00795;old_locus_tag=RM615_00795 NZ_JAVRJW010000001.1 Protein Homology CDS 151363 153006 . + 0 ID=cds-WP_105996676.1;Parent=gene-RM615_RS00795;Dbxref=GenBank:WP_105996676.1;Name=WP_105996676.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168568.1;locus_tag=RM615_RS00795;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_105996676.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 153374 153811 . - . ID=gene-RM615_RS00800;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=RM615_RS00800;old_locus_tag=RM615_00800 NZ_JAVRJW010000001.1 Protein Homology CDS 153374 153811 . - 0 ID=cds-WP_037572629.1;Parent=gene-RM615_RS00800;Dbxref=GenBank:WP_037572629.1;Name=WP_037572629.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=RM615_RS00800;product=global transcriptional regulator MgrA;protein_id=WP_037572629.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 154032 154952 . + . ID=gene-RM615_RS00805;Name=RM615_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00805;old_locus_tag=RM615_00805 NZ_JAVRJW010000001.1 Protein Homology CDS 154032 154952 . + 0 ID=cds-WP_105996677.1;Parent=gene-RM615_RS00805;Dbxref=GenBank:WP_105996677.1;Name=WP_105996677.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014542.7;locus_tag=RM615_RS00805;product=CobW family GTP-binding protein;protein_id=WP_105996677.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 154973 155881 . + . ID=gene-RM615_RS00810;Name=RM615_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00810;old_locus_tag=RM615_00810 NZ_JAVRJW010000001.1 Protein Homology CDS 154973 155881 . + 0 ID=cds-WP_037572625.1;Parent=gene-RM615_RS00810;Dbxref=GenBank:WP_037572625.1;Name=WP_037572625.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166176.1;locus_tag=RM615_RS00810;product=aldo/keto reductase;protein_id=WP_037572625.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 155906 156190 . + . ID=gene-RM615_RS00815;Name=RM615_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00815;old_locus_tag=RM615_00815 NZ_JAVRJW010000001.1 Protein Homology CDS 155906 156190 . + 0 ID=cds-WP_037572624.1;Parent=gene-RM615_RS00815;Dbxref=GenBank:WP_037572624.1;Name=WP_037572624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=RM615_RS00815;product=hypothetical protein;protein_id=WP_037572624.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 156331 157272 . + . ID=gene-RM615_RS00820;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=RM615_RS00820;old_locus_tag=RM615_00820 NZ_JAVRJW010000001.1 Protein Homology CDS 156331 157272 . + 0 ID=cds-WP_107370291.1;Parent=gene-RM615_RS00820;Dbxref=GenBank:WP_107370291.1;Name=WP_107370291.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=RM615_RS00820;product=malate dehydrogenase;protein_id=WP_107370291.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 157493 158209 . - . ID=gene-RM615_RS00825;Name=RM615_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00825;old_locus_tag=RM615_00825 NZ_JAVRJW010000001.1 Protein Homology CDS 157493 158209 . - 0 ID=cds-WP_311540845.1;Parent=gene-RM615_RS00825;Dbxref=GenBank:WP_311540845.1;Name=WP_311540845.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168562.1;locus_tag=RM615_RS00825;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311540845.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 158496 159113 . - . ID=gene-RM615_RS00835;Name=RM615_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00835;old_locus_tag=RM615_00835 NZ_JAVRJW010000001.1 Protein Homology CDS 158496 159113 . - 0 ID=cds-WP_037572616.1;Parent=gene-RM615_RS00835;Dbxref=GenBank:WP_037572616.1;Name=WP_037572616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=RM615_RS00835;product=DUF1361 domain-containing protein;protein_id=WP_037572616.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 159405 160565 . + . ID=gene-RM615_RS00840;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=RM615_RS00840;old_locus_tag=RM615_00840 NZ_JAVRJW010000001.1 Protein Homology CDS 159405 160565 . + 0 ID=cds-WP_037572613.1;Parent=gene-RM615_RS00840;Dbxref=GenBank:WP_037572613.1;Name=WP_037572613.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=RM615_RS00840;product=multidrug efflux MFS transporter NorA;protein_id=WP_037572613.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 160634 162955 . + . ID=gene-RM615_RS00845;Name=RM615_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00845;old_locus_tag=RM615_00845 NZ_JAVRJW010000001.1 Protein Homology CDS 160634 162955 . + 0 ID=cds-WP_105996682.1;Parent=gene-RM615_RS00845;Dbxref=GenBank:WP_105996682.1;Name=WP_105996682.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=RM615_RS00845;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_105996682.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 162974 163450 . + . ID=gene-RM615_RS00850;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=RM615_RS00850;old_locus_tag=RM615_00850 NZ_JAVRJW010000001.1 Protein Homology CDS 162974 163450 . + 0 ID=cds-WP_105996683.1;Parent=gene-RM615_RS00850;Dbxref=GenBank:WP_105996683.1;Name=WP_105996683.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459774.1;locus_tag=RM615_RS00850;product=Cys-tRNA(Pro) deacylase;protein_id=WP_105996683.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 163603 164358 . + . ID=gene-RM615_RS00855;Name=RM615_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00855;old_locus_tag=RM615_00855 NZ_JAVRJW010000001.1 Protein Homology CDS 163603 164358 . + 0 ID=cds-WP_037572608.1;Parent=gene-RM615_RS00855;Dbxref=GenBank:WP_037572608.1;Name=WP_037572608.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424455.1;locus_tag=RM615_RS00855;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037572608.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 164355 165278 . + . ID=gene-RM615_RS00860;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=RM615_RS00860;old_locus_tag=RM615_00860 NZ_JAVRJW010000001.1 Protein Homology CDS 164355 165278 . + 0 ID=cds-WP_037572607.1;Parent=gene-RM615_RS00860;Dbxref=GenBank:WP_037572607.1;Name=WP_037572607.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=RM615_RS00860;product=1-phosphofructokinase;protein_id=WP_037572607.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 165280 167199 . + . ID=gene-RM615_RS00865;Name=RM615_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00865;old_locus_tag=RM615_00865 NZ_JAVRJW010000001.1 Protein Homology CDS 165280 167199 . + 0 ID=cds-WP_037572606.1;Parent=gene-RM615_RS00865;Dbxref=GenBank:WP_037572606.1;Name=WP_037572606.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=RM615_RS00865;product=PTS fructose transporter subunit IIABC;protein_id=WP_037572606.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 167671 169035 . + . ID=gene-RM615_RS00870;Name=RM615_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00870;old_locus_tag=RM615_00870 NZ_JAVRJW010000001.1 Protein Homology CDS 167671 169035 . + 0 ID=cds-WP_037572605.1;Parent=gene-RM615_RS00870;Dbxref=GenBank:WP_037572605.1;Name=WP_037572605.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481493.1;locus_tag=RM615_RS00870;product=hemolysin family protein;protein_id=WP_037572605.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 169361 170326 . + . ID=gene-RM615_RS00875;Name=RM615_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00875;old_locus_tag=RM615_00875 NZ_JAVRJW010000001.1 Protein Homology CDS 169361 170326 . + 0 ID=cds-WP_311540846.1;Parent=gene-RM615_RS00875;Dbxref=GenBank:WP_311540846.1;Name=WP_311540846.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728730.1;locus_tag=RM615_RS00875;product=glycosyltransferase family 2 protein;protein_id=WP_311540846.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 170818 172899 . + . ID=gene-RM615_RS00880;Name=RM615_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00880;old_locus_tag=RM615_00880 NZ_JAVRJW010000001.1 Protein Homology CDS 170818 172899 . + 0 ID=cds-WP_311540847.1;Parent=gene-RM615_RS00880;Dbxref=GenBank:WP_311540847.1;Name=WP_311540847.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:TIGR01193.1;locus_tag=RM615_RS00880;product=peptidase domain-containing ABC transporter;protein_id=WP_311540847.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 172903 173559 . + . ID=gene-RM615_RS00885;Name=RM615_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00885;old_locus_tag=RM615_00885 NZ_JAVRJW010000001.1 Protein Homology CDS 172903 173559 . + 0 ID=cds-WP_145401399.1;Parent=gene-RM615_RS00885;Dbxref=GenBank:WP_145401399.1;Name=WP_145401399.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: protein motif:HMM:NF024853.7;locus_tag=RM615_RS00885;product=DsbA family protein;protein_id=WP_145401399.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 173635 173835 . + . ID=gene-RM615_RS00890;Name=RM615_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00890;old_locus_tag=RM615_00890 NZ_JAVRJW010000001.1 Protein Homology CDS 173635 173835 . + 0 ID=cds-WP_145401396.1;Parent=gene-RM615_RS00890;Dbxref=GenBank:WP_145401396.1;Name=WP_145401396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF058403.1;locus_tag=RM615_RS00890;product=Blp family class II bacteriocin;protein_id=WP_145401396.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 173993 174210 . + . ID=gene-RM615_RS00895;Name=RM615_RS00895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS00895;old_locus_tag=RM615_00895;partial=true;pseudo=true;start_range=.,173993 NZ_JAVRJW010000001.1 Protein Homology CDS 173993 174210 . + 0 ID=cds-RM615_RS00895;Parent=gene-RM615_RS00895;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493337.1;locus_tag=RM615_RS00895;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,173993;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 174345 174602 . - . ID=gene-RM615_RS00900;Name=RM615_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00900;old_locus_tag=RM615_00900 NZ_JAVRJW010000001.1 Protein Homology CDS 174345 174602 . - 0 ID=cds-WP_145401393.1;Parent=gene-RM615_RS00900;Dbxref=GenBank:WP_145401393.1;Name=WP_145401393.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481501.1;locus_tag=RM615_RS00900;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_145401393.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 174679 175266 . - . ID=gene-RM615_RS00905;Name=RM615_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00905;old_locus_tag=RM615_00905 NZ_JAVRJW010000001.1 Protein Homology CDS 174679 175266 . - 0 ID=cds-WP_311540848.1;Parent=gene-RM615_RS00905;Dbxref=GenBank:WP_311540848.1;Name=WP_311540848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424462.1;locus_tag=RM615_RS00905;product=hypothetical protein;protein_id=WP_311540848.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 175368 176081 . - . ID=gene-RM615_RS00910;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=RM615_RS00910;old_locus_tag=RM615_00910 NZ_JAVRJW010000001.1 Protein Homology CDS 175368 176081 . - 0 ID=cds-WP_037572599.1;Parent=gene-RM615_RS00910;Dbxref=GenBank:WP_037572599.1;Name=WP_037572599.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=RM615_RS00910;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_037572599.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 176074 176505 . - . ID=gene-RM615_RS00915;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=RM615_RS00915;old_locus_tag=RM615_00915 NZ_JAVRJW010000001.1 Protein Homology CDS 176074 176505 . - 0 ID=cds-WP_037572596.1;Parent=gene-RM615_RS00915;Dbxref=GenBank:WP_037572596.1;Name=WP_037572596.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=RM615_RS00915;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_037572596.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 176502 177173 . - . ID=gene-RM615_RS00920;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=RM615_RS00920;old_locus_tag=RM615_00920 NZ_JAVRJW010000001.1 Protein Homology CDS 176502 177173 . - 0 ID=cds-WP_107368077.1;Parent=gene-RM615_RS00920;Dbxref=GenBank:WP_107368077.1;Name=WP_107368077.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424465.1;locus_tag=RM615_RS00920;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_107368077.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 177505 178098 . + . ID=gene-RM615_RS00925;Name=RM615_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00925;old_locus_tag=RM615_00925 NZ_JAVRJW010000001.1 Protein Homology CDS 177505 178098 . + 0 ID=cds-WP_037572590.1;Parent=gene-RM615_RS00925;Dbxref=GenBank:WP_037572590.1;Name=WP_037572590.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=RM615_RS00925;product=anthranilate synthase component II;protein_id=WP_037572590.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 178082 179218 . + . ID=gene-RM615_RS00930;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=RM615_RS00930;old_locus_tag=RM615_00930 NZ_JAVRJW010000001.1 Protein Homology CDS 178082 179218 . + 0 ID=cds-WP_107363570.1;Parent=gene-RM615_RS00930;Dbxref=GenBank:WP_107363570.1;Name=WP_107363570.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=aminodeoxychorismate synthase activity|0046820||IEA;go_process=4-aminobenzoate biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=RM615_RS00930;product=aminodeoxychorismate synthase component I;protein_id=WP_107363570.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 179222 179830 . + . ID=gene-RM615_RS00935;Name=RM615_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00935;old_locus_tag=RM615_00935 NZ_JAVRJW010000001.1 Protein Homology CDS 179222 179830 . + 0 ID=cds-WP_105962947.1;Parent=gene-RM615_RS00935;Dbxref=GenBank:WP_105962947.1;Name=WP_105962947.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013247.7;locus_tag=RM615_RS00935;product=aminotransferase class IV;protein_id=WP_105962947.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 180063 180746 . + . ID=gene-RM615_RS00940;Name=RM615_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00940;old_locus_tag=RM615_00940 NZ_JAVRJW010000001.1 Protein Homology CDS 180063 180746 . + 0 ID=cds-WP_105965138.1;Parent=gene-RM615_RS00940;Dbxref=GenBank:WP_105965138.1;Name=WP_105965138.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452712.1;locus_tag=RM615_RS00940;product=5-oxoprolinase subunit B family protein;protein_id=WP_105965138.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 180743 181747 . + . ID=gene-RM615_RS00945;Name=RM615_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00945;old_locus_tag=RM615_00945 NZ_JAVRJW010000001.1 Protein Homology CDS 180743 181747 . + 0 ID=cds-WP_037572575.1;Parent=gene-RM615_RS00945;Dbxref=GenBank:WP_037572575.1;Name=WP_037572575.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=RM615_RS00945;product=5-oxoprolinase subunit C family protein;protein_id=WP_037572575.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 182266 184203 . + . ID=gene-RM615_RS00950;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=RM615_RS00950;old_locus_tag=RM615_00950 NZ_JAVRJW010000001.1 Protein Homology CDS 182266 184203 . + 0 ID=cds-WP_105962949.1;Parent=gene-RM615_RS00950;Dbxref=GenBank:WP_105962949.1;Name=WP_105962949.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166148.1;locus_tag=RM615_RS00950;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_105962949.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 184358 185173 . - . ID=gene-RM615_RS00955;Name=RM615_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00955;old_locus_tag=RM615_00955 NZ_JAVRJW010000001.1 Protein Homology CDS 184358 185173 . - 0 ID=cds-WP_136731939.1;Parent=gene-RM615_RS00955;Dbxref=GenBank:WP_136731939.1;Name=WP_136731939.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276437.1;locus_tag=RM615_RS00955;product=ZIP family metal transporter;protein_id=WP_136731939.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 185286 187163 . + . ID=gene-RM615_RS00960;Name=RM615_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00960;old_locus_tag=RM615_00960 NZ_JAVRJW010000001.1 Protein Homology CDS 185286 187163 . + 0 ID=cds-WP_311540849.1;Parent=gene-RM615_RS00960;Dbxref=GenBank:WP_311540849.1;Name=WP_311540849.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=RM615_RS00960;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_311540849.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 187174 188952 . + . ID=gene-RM615_RS00965;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=RM615_RS00965;old_locus_tag=RM615_00965 NZ_JAVRJW010000001.1 Protein Homology CDS 187174 188952 . + 0 ID=cds-WP_105962951.1;Parent=gene-RM615_RS00965;Dbxref=GenBank:WP_105962951.1;Name=WP_105962951.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=RM615_RS00965;product=DNA helicase RecQ;protein_id=WP_105962951.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 189175 190128 . + . ID=gene-RM615_RS00970;Name=RM615_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00970;old_locus_tag=RM615_00970 NZ_JAVRJW010000001.1 Protein Homology CDS 189175 190128 . + 0 ID=cds-WP_037572561.1;Parent=gene-RM615_RS00970;Dbxref=GenBank:WP_037572561.1;Name=WP_037572561.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424489.1;locus_tag=RM615_RS00970;product=ABC transporter ATP-binding protein;protein_id=WP_037572561.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 190125 191639 . + . ID=gene-RM615_RS00975;Name=RM615_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00975;old_locus_tag=RM615_00975 NZ_JAVRJW010000001.1 Protein Homology CDS 190125 191639 . + 0 ID=cds-WP_107378096.1;Parent=gene-RM615_RS00975;Dbxref=GenBank:WP_107378096.1;Name=WP_107378096.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441471.1;locus_tag=RM615_RS00975;product=ABC transporter permease/substrate-binding protein;protein_id=WP_107378096.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 191822 192871 . + . ID=gene-RM615_RS00980;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=RM615_RS00980;old_locus_tag=RM615_00980 NZ_JAVRJW010000001.1 Protein Homology CDS 191822 192871 . + 0 ID=cds-WP_103159360.1;Parent=gene-RM615_RS00980;Dbxref=GenBank:WP_103159360.1;Name=WP_103159360.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=RM615_RS00980;product=histidinol-phosphate transaminase;protein_id=WP_103159360.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 192942 193469 . + . ID=gene-RM615_RS00985;Name=RM615_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00985;old_locus_tag=RM615_00985 NZ_JAVRJW010000001.1 Protein Homology CDS 192942 193469 . + 0 ID=cds-WP_037572553.1;Parent=gene-RM615_RS00985;Dbxref=GenBank:WP_037572553.1;Name=WP_037572553.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424492.1;locus_tag=RM615_RS00985;product=5' nucleotidase%2C NT5C type;protein_id=WP_037572553.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 194254 194363 . + . ID=gene-RM615_RS11155;Name=RM615_RS11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11155;partial=true;pseudo=true;start_range=.,194254 NZ_JAVRJW010000001.1 Protein Homology CDS 194254 194363 . + 0 ID=cds-RM615_RS11155;Parent=gene-RM615_RS11155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=RM615_RS11155;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,194254;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 194425 195351 . - . ID=gene-RM615_RS00995;Name=RM615_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS00995;old_locus_tag=RM615_00995 NZ_JAVRJW010000001.1 Protein Homology CDS 194425 195351 . - 0 ID=cds-WP_037572549.1;Parent=gene-RM615_RS00995;Dbxref=GenBank:WP_037572549.1;Name=WP_037572549.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=RM615_RS00995;product=diacylglycerol/lipid kinase family protein;protein_id=WP_037572549.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 195590 197101 . - . ID=gene-RM615_RS01000;Name=RM615_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01000;old_locus_tag=RM615_01000 NZ_JAVRJW010000001.1 Protein Homology CDS 195590 197101 . - 0 ID=cds-WP_311540850.1;Parent=gene-RM615_RS01000;Dbxref=GenBank:WP_311540850.1;Name=WP_311540850.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=RM615_RS01000;product=peptide MFS transporter;protein_id=WP_311540850.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 197278 197778 . - . ID=gene-RM615_RS01005;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=RM615_RS01005;old_locus_tag=RM615_01005 NZ_JAVRJW010000001.1 Protein Homology CDS 197278 197778 . - 0 ID=cds-WP_037572545.1;Parent=gene-RM615_RS01005;Dbxref=GenBank:WP_037572545.1;Name=WP_037572545.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479355.1;locus_tag=RM615_RS01005;product=preQ(1) synthase;protein_id=WP_037572545.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 197801 198673 . - . ID=gene-RM615_RS01010;Name=RM615_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01010;old_locus_tag=RM615_01010 NZ_JAVRJW010000001.1 Protein Homology CDS 197801 198673 . - 0 ID=cds-WP_037572541.1;Parent=gene-RM615_RS01010;Dbxref=GenBank:WP_037572541.1;Name=WP_037572541.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276426.1;locus_tag=RM615_RS01010;product=DMT family transporter;protein_id=WP_037572541.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 199356 199745 . + . ID=gene-RM615_RS01015;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=RM615_RS01015;old_locus_tag=RM615_01015 NZ_JAVRJW010000001.1 Protein Homology CDS 199356 199745 . + 0 ID=cds-WP_037572538.1;Parent=gene-RM615_RS01015;Dbxref=GenBank:WP_037572538.1;Name=WP_037572538.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=RM615_RS01015;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_037572538.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 199717 201822 . + . ID=gene-RM615_RS01020;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=RM615_RS01020;old_locus_tag=RM615_01020 NZ_JAVRJW010000001.1 Protein Homology CDS 199717 201822 . + 0 ID=cds-WP_105962954.1;Parent=gene-RM615_RS01020;Dbxref=GenBank:WP_105962954.1;Name=WP_105962954.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=RM615_RS01020;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_105962954.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 202070 203041 . + . ID=gene-RM615_RS01025;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=RM615_RS01025;old_locus_tag=RM615_01025 NZ_JAVRJW010000001.1 Protein Homology CDS 202070 203041 . + 0 ID=cds-WP_037572532.1;Parent=gene-RM615_RS01025;Dbxref=GenBank:WP_037572532.1;Name=WP_037572532.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499303.1;locus_tag=RM615_RS01025;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_037572532.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 203599 203913 . - . ID=gene-RM615_RS01030;Name=RM615_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01030;old_locus_tag=RM615_01030 NZ_JAVRJW010000001.1 Protein Homology CDS 203599 203913 . - 0 ID=cds-WP_037572530.1;Parent=gene-RM615_RS01030;Dbxref=GenBank:WP_037572530.1;Name=WP_037572530.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484624.1;locus_tag=RM615_RS01030;product=CHY zinc finger protein;protein_id=WP_037572530.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 203929 204855 . - . ID=gene-RM615_RS01035;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=RM615_RS01035;old_locus_tag=RM615_01035 NZ_JAVRJW010000001.1 Protein Homology CDS 203929 204855 . - 0 ID=cds-WP_311540851.1;Parent=gene-RM615_RS01035;Dbxref=GenBank:WP_311540851.1;Name=WP_311540851.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471788.1;locus_tag=RM615_RS01035;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_311540851.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 204928 205446 . - . ID=gene-RM615_RS01040;Name=RM615_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01040;old_locus_tag=RM615_01040 NZ_JAVRJW010000001.1 Protein Homology CDS 204928 205446 . - 0 ID=cds-WP_107366664.1;Parent=gene-RM615_RS01040;Dbxref=GenBank:WP_107366664.1;Name=WP_107366664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383087.1;locus_tag=RM615_RS01040;product=GrpB family protein;protein_id=WP_107366664.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 205546 206445 . + . ID=gene-RM615_RS01045;Name=RM615_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01045;old_locus_tag=RM615_01045 NZ_JAVRJW010000001.1 Protein Homology CDS 205546 206445 . + 0 ID=cds-WP_311540852.1;Parent=gene-RM615_RS01045;Dbxref=GenBank:WP_311540852.1;Name=WP_311540852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033194.1;locus_tag=RM615_RS01045;product=EMYY motif lipoprotein;protein_id=WP_311540852.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 206590 206907 . + . ID=gene-RM615_RS01050;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=RM615_RS01050;old_locus_tag=RM615_01050 NZ_JAVRJW010000001.1 Protein Homology CDS 206590 206907 . + 0 ID=cds-WP_037572519.1;Parent=gene-RM615_RS01050;Dbxref=GenBank:WP_037572519.1;Name=WP_037572519.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=RM615_RS01050;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_037572519.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 207027 208139 . + . ID=gene-RM615_RS01055;Name=RM615_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01055;old_locus_tag=RM615_01055 NZ_JAVRJW010000001.1 Protein Homology CDS 207027 208139 . + 0 ID=cds-WP_037572516.1;Parent=gene-RM615_RS01055;Dbxref=GenBank:WP_037572516.1;Name=WP_037572516.1;Ontology_term=GO:0008152,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476428.1;locus_tag=RM615_RS01055;product=glycerate kinase;protein_id=WP_037572516.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 208190 209416 . - . ID=gene-RM615_RS01060;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=RM615_RS01060;old_locus_tag=RM615_01060 NZ_JAVRJW010000001.1 Protein Homology CDS 208190 209416 . - 0 ID=cds-WP_105962957.1;Parent=gene-RM615_RS01060;Dbxref=GenBank:WP_105962957.1;Name=WP_105962957.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898336.1;locus_tag=RM615_RS01060;product=peptidase T;protein_id=WP_105962957.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 209429 209932 . - . ID=gene-RM615_RS01065;Name=RM615_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01065;old_locus_tag=RM615_01065 NZ_JAVRJW010000001.1 Protein Homology CDS 209429 209932 . - 0 ID=cds-WP_103158917.1;Parent=gene-RM615_RS01065;Dbxref=GenBank:WP_103158917.1;Name=WP_103158917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=RM615_RS01065;product=threonine/serine exporter family protein;protein_id=WP_103158917.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 209947 210708 . - . ID=gene-RM615_RS01070;Name=RM615_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01070;old_locus_tag=RM615_01070 NZ_JAVRJW010000001.1 Protein Homology CDS 209947 210708 . - 0 ID=cds-WP_037572509.1;Parent=gene-RM615_RS01070;Dbxref=GenBank:WP_037572509.1;Name=WP_037572509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=RM615_RS01070;product=threonine/serine exporter family protein;protein_id=WP_037572509.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 211015 212085 . - . ID=gene-RM615_RS01075;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=RM615_RS01075;old_locus_tag=RM615_01075 NZ_JAVRJW010000001.1 Protein Homology CDS 211015 212085 . - 0 ID=cds-WP_105962958.1;Parent=gene-RM615_RS01075;Dbxref=GenBank:WP_105962958.1;Name=WP_105962958.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424511.1;locus_tag=RM615_RS01075;product=GGDEF domain-containing protein GdpS;protein_id=WP_105962958.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 212307 213353 . + . ID=gene-RM615_RS01080;Name=RM615_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01080;old_locus_tag=RM615_01080 NZ_JAVRJW010000001.1 Protein Homology CDS 212307 213353 . + 0 ID=cds-WP_037572505.1;Parent=gene-RM615_RS01080;Dbxref=GenBank:WP_037572505.1;Name=WP_037572505.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483912.1;locus_tag=RM615_RS01080;product=glycosyltransferase family 4 protein;protein_id=WP_037572505.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 213402 214040 . - . ID=gene-RM615_RS01085;Name=RM615_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01085;old_locus_tag=RM615_01085 NZ_JAVRJW010000001.1 Protein Homology CDS 213402 214040 . - 0 ID=cds-WP_037572503.1;Parent=gene-RM615_RS01085;Dbxref=GenBank:WP_037572503.1;Name=WP_037572503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633769.1;locus_tag=RM615_RS01085;product=YigZ family protein;protein_id=WP_037572503.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 214254 215126 . + . ID=gene-RM615_RS01090;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=RM615_RS01090;old_locus_tag=RM615_01090 NZ_JAVRJW010000001.1 Protein Homology CDS 214254 215126 . + 0 ID=cds-WP_105996690.1;Parent=gene-RM615_RS01090;Dbxref=GenBank:WP_105996690.1;Name=WP_105996690.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=RM615_RS01090;product=fatty acid kinase binding subunit FakB1;protein_id=WP_105996690.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 215277 216566 . + . ID=gene-RM615_RS01095;Name=RM615_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01095;old_locus_tag=RM615_01095 NZ_JAVRJW010000001.1 Protein Homology CDS 215277 216566 . + 0 ID=cds-WP_105962959.1;Parent=gene-RM615_RS01095;Dbxref=GenBank:WP_105962959.1;Name=WP_105962959.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508280.1;locus_tag=RM615_RS01095;product=DEAD/DEAH box helicase family protein;protein_id=WP_105962959.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 216662 217222 . + . ID=gene-RM615_RS01100;Name=RM615_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01100;old_locus_tag=RM615_01100 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 216662 217222 . + 0 ID=cds-WP_233650038.1;Parent=gene-RM615_RS01100;Dbxref=GenBank:WP_233650038.1;Name=WP_233650038.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01100;product=ComF family protein;protein_id=WP_233650038.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 217287 217856 . + . ID=gene-RM615_RS01105;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=RM615_RS01105;old_locus_tag=RM615_01105 NZ_JAVRJW010000001.1 Protein Homology CDS 217287 217856 . + 0 ID=cds-WP_037572494.1;Parent=gene-RM615_RS01105;Dbxref=GenBank:WP_037572494.1;Name=WP_037572494.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464843.1;locus_tag=RM615_RS01105;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_037572494.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 218077 220605 . + . ID=gene-RM615_RS01110;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=RM615_RS01110;old_locus_tag=RM615_01110 NZ_JAVRJW010000001.1 Protein Homology CDS 218077 220605 . + 0 ID=cds-WP_311540853.1;Parent=gene-RM615_RS01110;Dbxref=GenBank:WP_311540853.1;Name=WP_311540853.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499326.1;locus_tag=RM615_RS01110;product=preprotein translocase subunit SecA;protein_id=WP_311540853.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 220629 221733 . + . ID=gene-RM615_RS01115;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=RM615_RS01115;old_locus_tag=RM615_01115 NZ_JAVRJW010000001.1 Protein Homology CDS 220629 220700 . + 0 ID=cds-WP_105996692.1;Parent=gene-RM615_RS01115;Dbxref=GenBank:WP_105996692.1;Name=WP_105996692.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM615_RS01115;product=peptide chain release factor 2;protein_id=WP_105996692.1;transl_table=11 NZ_JAVRJW010000001.1 Protein Homology CDS 220702 221733 . + 0 ID=cds-WP_105996692.1;Parent=gene-RM615_RS01115;Dbxref=GenBank:WP_105996692.1;Name=WP_105996692.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM615_RS01115;product=peptide chain release factor 2;protein_id=WP_105996692.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 221820 222683 . + . ID=gene-RM615_RS01120;Name=RM615_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01120;old_locus_tag=RM615_01120 NZ_JAVRJW010000001.1 Protein Homology CDS 221820 222683 . + 0 ID=cds-WP_105996693.1;Parent=gene-RM615_RS01120;Dbxref=GenBank:WP_105996693.1;Name=WP_105996693.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF017102.7;locus_tag=RM615_RS01120;product=CHAP domain-containing protein;protein_id=WP_105996693.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 222812 223453 . + . ID=gene-RM615_RS01125;Name=RM615_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01125;old_locus_tag=RM615_01125 NZ_JAVRJW010000001.1 Protein Homology CDS 222812 223453 . + 0 ID=cds-WP_037572489.1;Parent=gene-RM615_RS01125;Dbxref=GenBank:WP_037572489.1;Name=WP_037572489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=RM615_RS01125;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_037572489.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 223459 223695 . + . ID=gene-RM615_RS01130;Name=RM615_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01130;old_locus_tag=RM615_01130 NZ_JAVRJW010000001.1 Protein Homology CDS 223459 223695 . + 0 ID=cds-WP_037572486.1;Parent=gene-RM615_RS01130;Dbxref=GenBank:WP_037572486.1;Name=WP_037572486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=RM615_RS01130;product=CsbA family protein;protein_id=WP_037572486.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 223850 225832 . + . ID=gene-RM615_RS01135;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=RM615_RS01135;old_locus_tag=RM615_01135 NZ_JAVRJW010000001.1 Protein Homology CDS 223850 225832 . + 0 ID=cds-WP_037572484.1;Parent=gene-RM615_RS01135;Dbxref=GenBank:WP_037572484.1;Name=WP_037572484.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=RM615_RS01135;product=excinuclease ABC subunit UvrB;protein_id=WP_037572484.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 225838 228681 . + . ID=gene-RM615_RS01140;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=RM615_RS01140;old_locus_tag=RM615_01140 NZ_JAVRJW010000001.1 Protein Homology CDS 225838 228681 . + 0 ID=cds-WP_311540854.1;Parent=gene-RM615_RS01140;Dbxref=GenBank:WP_311540854.1;Name=WP_311540854.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499337.1;locus_tag=RM615_RS01140;product=excinuclease ABC subunit UvrA;protein_id=WP_311540854.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 228685 229068 . + . ID=gene-RM615_RS01145;Name=RM615_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01145;old_locus_tag=RM615_01145 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 228685 229068 . + 0 ID=cds-WP_105996696.1;Parent=gene-RM615_RS01145;Dbxref=GenBank:WP_105996696.1;Name=WP_105996696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01145;product=hypothetical protein;protein_id=WP_105996696.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 229242 230177 . + . ID=gene-RM615_RS01150;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=RM615_RS01150;old_locus_tag=RM615_01150 NZ_JAVRJW010000001.1 Protein Homology CDS 229242 230177 . + 0 ID=cds-WP_037572477.1;Parent=gene-RM615_RS01150;Dbxref=GenBank:WP_037572477.1;Name=WP_037572477.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499338.1;locus_tag=RM615_RS01150;product=HPr(Ser) kinase/phosphatase;protein_id=WP_037572477.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 230180 231031 . + . ID=gene-RM615_RS01155;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=RM615_RS01155;old_locus_tag=RM615_01155 NZ_JAVRJW010000001.1 Protein Homology CDS 230180 231031 . + 0 ID=cds-WP_105996697.1;Parent=gene-RM615_RS01155;Dbxref=GenBank:WP_105996697.1;Name=WP_105996697.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472921.1;locus_tag=RM615_RS01155;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_105996697.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 231015 231500 . + . ID=gene-RM615_RS01160;Name=RM615_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01160;old_locus_tag=RM615_01160 NZ_JAVRJW010000001.1 Protein Homology CDS 231015 231500 . + 0 ID=cds-WP_037572473.1;Parent=gene-RM615_RS01160;Dbxref=GenBank:WP_037572473.1;Name=WP_037572473.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424528.1;locus_tag=RM615_RS01160;product=acyltransferase;protein_id=WP_037572473.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 231517 232953 . + . ID=gene-RM615_RS01165;Name=RM615_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01165;old_locus_tag=RM615_01165 NZ_JAVRJW010000001.1 Protein Homology CDS 231517 232953 . + 0 ID=cds-WP_311540855.1;Parent=gene-RM615_RS01165;Dbxref=GenBank:WP_311540855.1;Name=WP_311540855.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483896.1;locus_tag=RM615_RS01165;product=tetratricopeptide repeat protein;protein_id=WP_311540855.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 233017 233961 . + . ID=gene-RM615_RS01170;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=RM615_RS01170;old_locus_tag=RM615_01170 NZ_JAVRJW010000001.1 Protein Homology CDS 233017 233961 . + 0 ID=cds-WP_037572468.1;Parent=gene-RM615_RS01170;Dbxref=GenBank:WP_037572468.1;Name=WP_037572468.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469483.1;locus_tag=RM615_RS01170;product=thioredoxin-disulfide reductase;protein_id=WP_037572468.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 234125 235048 . + . ID=gene-RM615_RS01175;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=RM615_RS01175;old_locus_tag=RM615_01175 NZ_JAVRJW010000001.1 Protein Homology CDS 234125 235048 . + 0 ID=cds-WP_037572466.1;Parent=gene-RM615_RS01175;Dbxref=GenBank:WP_037572466.1;Name=WP_037572466.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303622.1;locus_tag=RM615_RS01175;product=RNase adapter RapZ;protein_id=WP_037572466.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 235035 236033 . + . ID=gene-RM615_RS01180;Name=mgfK;gbkey=Gene;gene=mgfK;gene_biotype=protein_coding;gene_synonym=yvcK;locus_tag=RM615_RS01180;old_locus_tag=RM615_01180 NZ_JAVRJW010000001.1 Protein Homology CDS 235035 236033 . + 0 ID=cds-WP_037572464.1;Parent=gene-RM615_RS01180;Dbxref=GenBank:WP_037572464.1;Name=WP_037572464.1;Ontology_term=GO:0008360,GO:0043743;gbkey=CDS;gene=mgfK;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=RM615_RS01180;product=gluconeogenesis morphogenetic factor MgfK;protein_id=WP_037572464.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 236093 237037 . + . ID=gene-RM615_RS01185;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=RM615_RS01185;old_locus_tag=RM615_01185 NZ_JAVRJW010000001.1 Protein Homology CDS 236093 237037 . + 0 ID=cds-WP_037572462.1;Parent=gene-RM615_RS01185;Dbxref=GenBank:WP_037572462.1;Name=WP_037572462.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=RM615_RS01185;product=DNA-binding protein WhiA;protein_id=WP_037572462.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 237076 237657 . - . ID=gene-RM615_RS01190;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=RM615_RS01190;old_locus_tag=RM615_01190 NZ_JAVRJW010000001.1 Protein Homology CDS 237076 237657 . - 0 ID=cds-WP_037572459.1;Parent=gene-RM615_RS01190;Dbxref=GenBank:WP_037572459.1;Name=WP_037572459.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424534.1;locus_tag=RM615_RS01190;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_037572459.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 238216 238977 . + . ID=gene-RM615_RS01195;Name=RM615_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01195;old_locus_tag=RM615_01195 NZ_JAVRJW010000001.1 Protein Homology CDS 238216 238977 . + 0 ID=cds-WP_037572456.1;Parent=gene-RM615_RS01195;Dbxref=GenBank:WP_037572456.1;Name=WP_037572456.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479341.1;locus_tag=RM615_RS01195;product=peptidoglycan recognition protein family protein;protein_id=WP_037572456.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 239240 239440 . + . ID=gene-RM615_RS01200;Name=RM615_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01200;old_locus_tag=RM615_01200 NZ_JAVRJW010000001.1 Protein Homology CDS 239240 239440 . + 0 ID=cds-WP_037572454.1;Parent=gene-RM615_RS01200;Dbxref=GenBank:WP_037572454.1;Name=WP_037572454.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=RM615_RS01200;product=cold shock domain-containing protein;protein_id=WP_037572454.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 239497 239700 . - . ID=gene-RM615_RS01205;Name=RM615_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01205;old_locus_tag=RM615_01205 NZ_JAVRJW010000001.1 Protein Homology CDS 239497 239700 . - 0 ID=cds-WP_037572452.1;Parent=gene-RM615_RS01205;Dbxref=GenBank:WP_037572452.1;Name=WP_037572452.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=RM615_RS01205;product=TM2 domain-containing protein;protein_id=WP_037572452.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 239873 240655 . + . ID=gene-RM615_RS01210;Name=RM615_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01210;old_locus_tag=RM615_01210 NZ_JAVRJW010000001.1 Protein Homology CDS 239873 240655 . + 0 ID=cds-WP_107366503.1;Parent=gene-RM615_RS01210;Dbxref=GenBank:WP_107366503.1;Name=WP_107366503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664081.1;locus_tag=RM615_RS01210;product=VOC family protein;protein_id=WP_107366503.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 240823 242328 . - . ID=gene-RM615_RS01215;Name=RM615_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01215;old_locus_tag=RM615_01215 NZ_JAVRJW010000001.1 Protein Homology CDS 240823 242328 . - 0 ID=cds-WP_103158929.1;Parent=gene-RM615_RS01215;Dbxref=GenBank:WP_103158929.1;Name=WP_103158929.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912174.1;locus_tag=RM615_RS01215;product=M4 family metallopeptidase;protein_id=WP_103158929.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 242531 242971 . + . ID=gene-RM615_RS01220;Name=RM615_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01220;old_locus_tag=RM615_01220 NZ_JAVRJW010000001.1 Protein Homology CDS 242531 242971 . + 0 ID=cds-WP_311540857.1;Parent=gene-RM615_RS01220;Dbxref=GenBank:WP_311540857.1;Name=WP_311540857.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363264.1;locus_tag=RM615_RS01220;product=GNAT family N-acetyltransferase;protein_id=WP_311540857.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 243116 244018 . - . ID=gene-RM615_RS01225;Name=RM615_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01225;old_locus_tag=RM615_01225 NZ_JAVRJW010000001.1 Protein Homology CDS 243116 244018 . - 0 ID=cds-WP_107360750.1;Parent=gene-RM615_RS01225;Dbxref=GenBank:WP_107360750.1;Name=WP_107360750.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165689.1;locus_tag=RM615_RS01225;product=TIGR01777 family oxidoreductase;protein_id=WP_107360750.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 244594 245343 . + . ID=gene-RM615_RS01230;Name=RM615_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01230;old_locus_tag=RM615_01230 NZ_JAVRJW010000001.1 Protein Homology CDS 244594 245343 . + 0 ID=cds-WP_311540858.1;Parent=gene-RM615_RS01230;Dbxref=GenBank:WP_311540858.1;Name=WP_311540858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168484.1;locus_tag=RM615_RS01230;product=DUF4887 domain-containing protein;protein_id=WP_311540858.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 245422 245682 . - . ID=gene-RM615_RS01235;Name=RM615_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01235;old_locus_tag=RM615_01235 NZ_JAVRJW010000001.1 Protein Homology CDS 245422 245682 . - 0 ID=cds-WP_037572438.1;Parent=gene-RM615_RS01235;Dbxref=GenBank:WP_037572438.1;Name=WP_037572438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424538.1;locus_tag=RM615_RS01235;product=hypothetical protein;protein_id=WP_037572438.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 245973 246989 . + . ID=gene-RM615_RS01240;Name=RM615_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01240;old_locus_tag=RM615_01240 NZ_JAVRJW010000001.1 Protein Homology CDS 245973 246989 . + 0 ID=cds-WP_037572435.1;Parent=gene-RM615_RS01240;Dbxref=GenBank:WP_037572435.1;Name=WP_037572435.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424539.1;locus_tag=RM615_RS01240;product=sugar-binding transcriptional regulator;protein_id=WP_037572435.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 247121 248128 . + . ID=gene-RM615_RS01245;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=RM615_RS01245;old_locus_tag=RM615_01245 NZ_JAVRJW010000001.1 Protein Homology CDS 247121 248128 . + 0 ID=cds-WP_037572432.1;Parent=gene-RM615_RS01245;Dbxref=GenBank:WP_037572432.1;Name=WP_037572432.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=RM615_RS01245;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037572432.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 248301 249491 . + . ID=gene-RM615_RS01250;Name=RM615_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01250;old_locus_tag=RM615_01250 NZ_JAVRJW010000001.1 Protein Homology CDS 248301 249491 . + 0 ID=cds-WP_037572429.1;Parent=gene-RM615_RS01250;Dbxref=GenBank:WP_037572429.1;Name=WP_037572429.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=RM615_RS01250;product=phosphoglycerate kinase;protein_id=WP_037572429.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 249564 250325 . + . ID=gene-RM615_RS01255;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=RM615_RS01255;old_locus_tag=RM615_01255 NZ_JAVRJW010000001.1 Protein Homology CDS 249564 250325 . + 0 ID=cds-WP_037572427.1;Parent=gene-RM615_RS01255;Dbxref=GenBank:WP_037572427.1;Name=WP_037572427.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=RM615_RS01255;product=triose-phosphate isomerase;protein_id=WP_037572427.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 250327 251847 . + . ID=gene-RM615_RS01260;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=RM615_RS01260;old_locus_tag=RM615_01260 NZ_JAVRJW010000001.1 Protein Homology CDS 250327 251847 . + 0 ID=cds-WP_037572425.1;Parent=gene-RM615_RS01260;Dbxref=GenBank:WP_037572425.1;Name=WP_037572425.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=RM615_RS01260;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_037572425.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 252006 253310 . + . ID=gene-RM615_RS01265;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=RM615_RS01265;old_locus_tag=RM615_01265 NZ_JAVRJW010000001.1 Protein Homology CDS 252006 253310 . + 0 ID=cds-WP_037572424.1;Parent=gene-RM615_RS01265;Dbxref=GenBank:WP_037572424.1;Name=WP_037572424.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=RM615_RS01265;product=surface-displayed alpha-enolase;protein_id=WP_037572424.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 253463 253933 . + . ID=gene-RM615_RS01270;Name=RM615_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01270;old_locus_tag=RM615_01270 NZ_JAVRJW010000001.1 Protein Homology CDS 253463 253933 . + 0 ID=cds-WP_229717270.1;Parent=gene-RM615_RS01270;Dbxref=GenBank:WP_229717270.1;Name=WP_229717270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=RM615_RS01270;product=hypothetical protein;protein_id=WP_229717270.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 254003 254236 . + . ID=gene-RM615_RS01275;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=RM615_RS01275;old_locus_tag=RM615_01275 NZ_JAVRJW010000001.1 Protein Homology CDS 254003 254236 . + 0 ID=cds-WP_037566707.1;Parent=gene-RM615_RS01275;Dbxref=GenBank:WP_037566707.1;Name=WP_037566707.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=RM615_RS01275;product=preprotein translocase subunit SecG;protein_id=WP_037566707.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 254390 255130 . + . ID=gene-RM615_RS01280;Name=RM615_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01280;old_locus_tag=RM615_01280 NZ_JAVRJW010000001.1 Protein Homology CDS 254390 255130 . + 0 ID=cds-WP_037572421.1;Parent=gene-RM615_RS01280;Dbxref=GenBank:WP_037572421.1;Name=WP_037572421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=RM615_RS01280;product=alpha/beta hydrolase;protein_id=WP_037572421.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 255169 257523 . + . ID=gene-RM615_RS01285;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=RM615_RS01285;old_locus_tag=RM615_01285 NZ_JAVRJW010000001.1 Protein Homology CDS 255169 257523 . + 0 ID=cds-WP_103158934.1;Parent=gene-RM615_RS01285;Dbxref=GenBank:WP_103158934.1;Name=WP_103158934.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=RM615_RS01285;product=ribonuclease R;protein_id=WP_103158934.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 257540 258004 . + . ID=gene-RM615_RS01290;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=RM615_RS01290;old_locus_tag=RM615_01290 NZ_JAVRJW010000001.1 Protein Homology CDS 257540 258004 . + 0 ID=cds-WP_037572408.1;Parent=gene-RM615_RS01290;Dbxref=GenBank:WP_037572408.1;Name=WP_037572408.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=RM615_RS01290;product=SsrA-binding protein SmpB;protein_id=WP_037572408.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 258077 258435 . + . ID=gene-RM615_RS01295;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=RM615_RS01295;old_locus_tag=RM615_01295 NZ_JAVRJW010000001.1 cmsearch tmRNA 258077 258435 . + . ID=rna-RM615_RS01295;Parent=gene-RM615_RS01295;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS01295;product=transfer-messenger RNA NZ_JAVRJW010000001.1 cmsearch exon 258077 258435 . + . ID=exon-RM615_RS01295-1;Parent=rna-RM615_RS01295;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS01295;product=transfer-messenger RNA NZ_JAVRJW010000001.1 RefSeq gene 258546 259652 . - . ID=gene-RM615_RS01300;Name=RM615_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01300;old_locus_tag=RM615_01300 NZ_JAVRJW010000001.1 Protein Homology CDS 258546 259652 . - 0 ID=cds-WP_311540928.1;Parent=gene-RM615_RS01300;Dbxref=GenBank:WP_311540928.1;Name=WP_311540928.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728767.1;locus_tag=RM615_RS01300;product=site-specific integrase;protein_id=WP_311540928.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 259666 260340 . - . ID=gene-RM615_RS01305;Name=RM615_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01305;old_locus_tag=RM615_01305 NZ_JAVRJW010000001.1 Protein Homology CDS 259666 260340 . - 0 ID=cds-WP_311540859.1;Parent=gene-RM615_RS01305;Dbxref=GenBank:WP_311540859.1;Name=WP_311540859.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476276.1;locus_tag=RM615_RS01305;product=helix-turn-helix domain-containing protein;protein_id=WP_311540859.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 260493 260711 . + . ID=gene-RM615_RS01310;Name=RM615_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01310;old_locus_tag=RM615_01310 NZ_JAVRJW010000001.1 Protein Homology CDS 260493 260711 . + 0 ID=cds-WP_311540860.1;Parent=gene-RM615_RS01310;Dbxref=GenBank:WP_311540860.1;Name=WP_311540860.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728769.1;locus_tag=RM615_RS01310;product=helix-turn-helix transcriptional regulator;protein_id=WP_311540860.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 260726 260929 . + . ID=gene-RM615_RS01315;Name=RM615_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01315;old_locus_tag=RM615_01315 NZ_JAVRJW010000001.1 Protein Homology CDS 260726 260929 . + 0 ID=cds-WP_311540861.1;Parent=gene-RM615_RS01315;Dbxref=GenBank:WP_311540861.1;Name=WP_311540861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231389.1;locus_tag=RM615_RS01315;product=pathogenicity island protein;protein_id=WP_311540861.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 260931 261140 . + . ID=gene-RM615_RS01320;Name=tscA;gbkey=Gene;gene=tscA;gene_biotype=protein_coding;locus_tag=RM615_RS01320;old_locus_tag=RM615_01320 NZ_JAVRJW010000001.1 Protein Homology CDS 260931 261140 . + 0 ID=cds-WP_311540862.1;Parent=gene-RM615_RS01320;Dbxref=GenBank:WP_311540862.1;Name=WP_311540862.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tscA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728771.1;locus_tag=RM615_RS01320;product=type II toxin-antitoxin system antitoxin TscA;protein_id=WP_311540862.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 261143 261445 . + . ID=gene-RM615_RS01325;Name=tscT;gbkey=Gene;gene=tscT;gene_biotype=protein_coding;locus_tag=RM615_RS01325;old_locus_tag=RM615_01325 NZ_JAVRJW010000001.1 Protein Homology CDS 261143 261445 . + 0 ID=cds-WP_311540863.1;Parent=gene-RM615_RS01325;Dbxref=GenBank:WP_311540863.1;Name=WP_311540863.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;gene=tscT;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: protein motif:HMM:NF018990.8;locus_tag=RM615_RS01325;product=type II toxin-antitoxin system toxin TscT;protein_id=WP_311540863.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 261506 263107 . + . ID=gene-RM615_RS01330;Name=RM615_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01330;old_locus_tag=RM615_01330 NZ_JAVRJW010000001.1 Protein Homology CDS 261506 263107 . + 0 ID=cds-WP_311540864.1;Parent=gene-RM615_RS01330;Dbxref=GenBank:WP_311540864.1;Name=WP_311540864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454448.1;locus_tag=RM615_RS01330;product=phage resistance protein;protein_id=WP_311540864.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 263290 264093 . + . ID=gene-RM615_RS01335;Name=RM615_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01335;old_locus_tag=RM615_01335 NZ_JAVRJW010000001.1 Protein Homology CDS 263290 264093 . + 0 ID=cds-WP_311540865.1;Parent=gene-RM615_RS01335;Dbxref=GenBank:WP_311540865.1;Name=WP_311540865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148374.1;locus_tag=RM615_RS01335;product=bifunctional DNA primase/polymerase;protein_id=WP_311540865.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 264080 264355 . + . ID=gene-RM615_RS01340;Name=RM615_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01340;old_locus_tag=RM615_01340 NZ_JAVRJW010000001.1 Protein Homology CDS 264080 264355 . + 0 ID=cds-WP_311540866.1;Parent=gene-RM615_RS01340;Dbxref=GenBank:WP_311540866.1;Name=WP_311540866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020477386.1;locus_tag=RM615_RS01340;product=pathogenicity island protein;protein_id=WP_311540866.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 264361 264798 . + . ID=gene-RM615_RS01345;Name=RM615_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01345;old_locus_tag=RM615_01345 NZ_JAVRJW010000001.1 Protein Homology CDS 264361 264798 . + 0 ID=cds-WP_311540867.1;Parent=gene-RM615_RS01345;Dbxref=GenBank:WP_311540867.1;Name=WP_311540867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384215.1;locus_tag=RM615_RS01345;product=hypothetical protein;protein_id=WP_311540867.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 264810 265178 . + . ID=gene-RM615_RS01350;Name=RM615_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01350;old_locus_tag=RM615_01350 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 264810 265178 . + 0 ID=cds-WP_107359846.1;Parent=gene-RM615_RS01350;Dbxref=GenBank:WP_107359846.1;Name=WP_107359846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01350;product=hypothetical protein;protein_id=WP_107359846.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 265520 265759 . + . ID=gene-RM615_RS01355;Name=RM615_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01355;old_locus_tag=RM615_01355 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 265520 265759 . + 0 ID=cds-WP_311540868.1;Parent=gene-RM615_RS01355;Dbxref=GenBank:WP_311540868.1;Name=WP_311540868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01355;product=hypothetical protein;protein_id=WP_311540868.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 265749 266357 . + . ID=gene-RM615_RS01360;Name=RM615_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01360;old_locus_tag=RM615_01360 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 265749 266357 . + 0 ID=cds-WP_311540869.1;Parent=gene-RM615_RS01360;Dbxref=GenBank:WP_311540869.1;Name=WP_311540869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01360;product=hypothetical protein;protein_id=WP_311540869.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 266422 266892 . + . ID=gene-RM615_RS01365;Name=RM615_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01365;old_locus_tag=RM615_01365 NZ_JAVRJW010000001.1 Protein Homology CDS 266422 266892 . + 0 ID=cds-WP_311540870.1;Parent=gene-RM615_RS01365;Dbxref=GenBank:WP_311540870.1;Name=WP_311540870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384207.1;locus_tag=RM615_RS01365;product=encapsidation protein CP3;protein_id=WP_311540870.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 266909 267244 . + . ID=gene-RM615_RS01370;Name=RM615_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01370;old_locus_tag=RM615_01370 NZ_JAVRJW010000001.1 Protein Homology CDS 266909 267244 . + 0 ID=cds-WP_311540871.1;Parent=gene-RM615_RS01370;Dbxref=GenBank:WP_311540871.1;Name=WP_311540871.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384205.1;locus_tag=RM615_RS01370;product=sigma-70 RNA polymerase sigma factor region 4 domain-containing protein;protein_id=WP_311540871.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 267400 267857 . + . ID=gene-RM615_RS01375;Name=RM615_RS01375;end_range=267857,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS01375;old_locus_tag=RM615_01375;partial=true;pseudo=true NZ_JAVRJW010000001.1 Protein Homology CDS 267400 267857 . + 0 ID=cds-RM615_RS01375;Parent=gene-RM615_RS01375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0051276,GO:0003677;end_range=267857,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501452.1;locus_tag=RM615_RS01375;partial=true;product=terminase small subunit;pseudo=true;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 267909 268334 . + . ID=gene-RM615_RS01380;Name=RM615_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01380;old_locus_tag=RM615_01380 NZ_JAVRJW010000001.1 Protein Homology CDS 267909 268334 . + 0 ID=cds-WP_311540929.1;Parent=gene-RM615_RS01380;Dbxref=GenBank:WP_311540929.1;Name=WP_311540929.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: protein motif:HMM:NF013661.7;locus_tag=RM615_RS01380;product=peptidoglycan recognition protein family protein;protein_id=WP_311540929.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 268335 268550 . + . ID=gene-RM615_RS01385;Name=RM615_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01385;old_locus_tag=RM615_01385 NZ_JAVRJW010000001.1 Protein Homology CDS 268335 268550 . + 0 ID=cds-WP_311540872.1;Parent=gene-RM615_RS01385;Dbxref=GenBank:WP_311540872.1;Name=WP_311540872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=RM615_RS01385;product=hypothetical protein;protein_id=WP_311540872.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 268680 269357 . + . ID=gene-RM615_RS01390;Name=RM615_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01390;old_locus_tag=RM615_01390 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 268680 269357 . + 0 ID=cds-WP_115346995.1;Parent=gene-RM615_RS01390;Dbxref=GenBank:WP_115346995.1;Name=WP_115346995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01390;product=hypothetical protein;protein_id=WP_115346995.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 269564 270298 . + . ID=gene-RM615_RS01395;Name=RM615_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01395;old_locus_tag=RM615_01395 NZ_JAVRJW010000001.1 Protein Homology CDS 269564 270298 . + 0 ID=cds-WP_103159623.1;Parent=gene-RM615_RS01395;Dbxref=GenBank:WP_103159623.1;Name=WP_103159623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490110.1;locus_tag=RM615_RS01395;product=halocin C8 precursor-like protein;protein_id=WP_103159623.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 270667 271458 . + . ID=gene-RM615_RS01400;Name=RM615_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01400;old_locus_tag=RM615_01400 NZ_JAVRJW010000001.1 Protein Homology CDS 270667 271458 . + 0 ID=cds-WP_037573026.1;Parent=gene-RM615_RS01400;Dbxref=GenBank:WP_037573026.1;Name=WP_037573026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500196.1;locus_tag=RM615_RS01400;product=HipA family kinase;protein_id=WP_037573026.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 271464 272201 . + . ID=gene-RM615_RS01405;Name=RM615_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01405;old_locus_tag=RM615_01405 NZ_JAVRJW010000001.1 Protein Homology CDS 271464 272201 . + 0 ID=cds-WP_311540874.1;Parent=gene-RM615_RS01405;Dbxref=GenBank:WP_311540874.1;Name=WP_311540874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278830.1;locus_tag=RM615_RS01405;product=hypothetical protein;protein_id=WP_311540874.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 272495 273223 . + . ID=gene-RM615_RS01410;Name=RM615_RS01410;end_range=273223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS01410;old_locus_tag=RM615_01410;partial=true;pseudo=true NZ_JAVRJW010000001.1 Protein Homology CDS 272495 273223 . + 0 ID=cds-RM615_RS01410;Parent=gene-RM615_RS01410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=273223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500729.1;locus_tag=RM615_RS01410;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 274071 274256 . - . ID=gene-RM615_RS01415;Name=RM615_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01415;old_locus_tag=RM615_01415 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 274071 274256 . - 0 ID=cds-WP_037572404.1;Parent=gene-RM615_RS01415;Dbxref=GenBank:WP_037572404.1;Name=WP_037572404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS01415;product=hypothetical protein;protein_id=WP_037572404.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 274520 275710 . + . ID=gene-RM615_RS01420;Name=RM615_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01420;old_locus_tag=RM615_01420 NZ_JAVRJW010000001.1 Protein Homology CDS 274520 275710 . + 0 ID=cds-WP_037572402.1;Parent=gene-RM615_RS01420;Dbxref=GenBank:WP_037572402.1;Name=WP_037572402.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.7;locus_tag=RM615_RS01420;product=cation:proton antiporter;protein_id=WP_037572402.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 275824 276006 . + . ID=gene-RM615_RS01425;Name=RM615_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01425;old_locus_tag=RM615_01425 NZ_JAVRJW010000001.1 Protein Homology CDS 275824 276006 . + 0 ID=cds-WP_037572401.1;Parent=gene-RM615_RS01425;Dbxref=GenBank:WP_037572401.1;Name=WP_037572401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303570.1;locus_tag=RM615_RS01425;product=CsbD family protein;protein_id=WP_037572401.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 276248 276904 . + . ID=gene-RM615_RS01430;Name=RM615_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01430;old_locus_tag=RM615_01430 NZ_JAVRJW010000001.1 Protein Homology CDS 276248 276904 . + 0 ID=cds-WP_311540875.1;Parent=gene-RM615_RS01430;Dbxref=GenBank:WP_311540875.1;Name=WP_311540875.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656193.1;locus_tag=RM615_RS01430;product=Crp/Fnr family transcriptional regulator;protein_id=WP_311540875.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 276981 278891 . + . ID=gene-RM615_RS01435;Name=RM615_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01435;old_locus_tag=RM615_01435 NZ_JAVRJW010000001.1 Protein Homology CDS 276981 278891 . + 0 ID=cds-WP_037572398.1;Parent=gene-RM615_RS01435;Dbxref=GenBank:WP_037572398.1;Name=WP_037572398.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479531.1;locus_tag=RM615_RS01435;product=heavy metal translocating P-type ATPase;protein_id=WP_037572398.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 278914 279129 . + . ID=gene-RM615_RS01440;Name=RM615_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01440;old_locus_tag=RM615_01440 NZ_JAVRJW010000001.1 Protein Homology CDS 278914 279129 . + 0 ID=cds-WP_037572397.1;Parent=gene-RM615_RS01440;Dbxref=GenBank:WP_037572397.1;Name=WP_037572397.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209103.1;locus_tag=RM615_RS01440;product=heavy-metal-associated domain-containing protein;protein_id=WP_037572397.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 279255 280727 . - . ID=gene-RM615_RS01445;Name=RM615_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01445;old_locus_tag=RM615_01445 NZ_JAVRJW010000001.1 Protein Homology CDS 279255 280727 . - 0 ID=cds-WP_037572395.1;Parent=gene-RM615_RS01445;Dbxref=GenBank:WP_037572395.1;Name=WP_037572395.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364574.1;locus_tag=RM615_RS01445;product=MFS transporter;protein_id=WP_037572395.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 280825 281196 . - . ID=gene-RM615_RS01450;Name=RM615_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01450;old_locus_tag=RM615_01450 NZ_JAVRJW010000001.1 Protein Homology CDS 280825 281196 . - 0 ID=cds-WP_107360756.1;Parent=gene-RM615_RS01450;Dbxref=GenBank:WP_107360756.1;Name=WP_107360756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=RM615_RS01450;product=DUF1722 domain-containing protein;protein_id=WP_107360756.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 281205 281708 . - . ID=gene-RM615_RS01455;Name=RM615_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01455;old_locus_tag=RM615_01455 NZ_JAVRJW010000001.1 Protein Homology CDS 281205 281708 . - 0 ID=cds-WP_105962971.1;Parent=gene-RM615_RS01455;Dbxref=GenBank:WP_105962971.1;Name=WP_105962971.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424562.1;locus_tag=RM615_RS01455;product=GNAT family N-acetyltransferase;protein_id=WP_105962971.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 281894 282313 . - . ID=gene-RM615_RS01460;Name=RM615_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01460;old_locus_tag=RM615_01460 NZ_JAVRJW010000001.1 Protein Homology CDS 281894 282313 . - 0 ID=cds-WP_037572388.1;Parent=gene-RM615_RS01460;Dbxref=GenBank:WP_037572388.1;Name=WP_037572388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503427.1;locus_tag=RM615_RS01460;product=organic hydroperoxide resistance protein;protein_id=WP_037572388.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 282440 283183 . + . ID=gene-RM615_RS01465;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=RM615_RS01465;old_locus_tag=RM615_01465 NZ_JAVRJW010000001.1 Protein Homology CDS 282440 283183 . + 0 ID=cds-WP_105962972.1;Parent=gene-RM615_RS01465;Dbxref=GenBank:WP_105962972.1;Name=WP_105962972.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=RM615_RS01465;product=type I 3-dehydroquinate dehydratase;protein_id=WP_105962972.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 283217 283762 . + . ID=gene-RM615_RS01470;Name=RM615_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01470;old_locus_tag=RM615_01470 NZ_JAVRJW010000001.1 Protein Homology CDS 283217 283762 . + 0 ID=cds-WP_037572384.1;Parent=gene-RM615_RS01470;Dbxref=GenBank:WP_037572384.1;Name=WP_037572384.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424567.1;locus_tag=RM615_RS01470;product=nitroreductase family protein;protein_id=WP_037572384.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 283849 284169 . - . ID=gene-RM615_RS01475;Name=RM615_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01475;old_locus_tag=RM615_01475 NZ_JAVRJW010000001.1 Protein Homology CDS 283849 284169 . - 0 ID=cds-WP_037572383.1;Parent=gene-RM615_RS01475;Dbxref=GenBank:WP_037572383.1;Name=WP_037572383.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147954.1;locus_tag=RM615_RS01475;product=thioredoxin family protein;protein_id=WP_037572383.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 284339 284692 . + . ID=gene-RM615_RS01480;Name=RM615_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01480;old_locus_tag=RM615_01480 NZ_JAVRJW010000001.1 Protein Homology CDS 284339 284692 . + 0 ID=cds-WP_103158888.1;Parent=gene-RM615_RS01480;Dbxref=GenBank:WP_103158888.1;Name=WP_103158888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450858.1;locus_tag=RM615_RS01480;product=arsenate reductase family protein;protein_id=WP_103158888.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 284763 285143 . + . ID=gene-RM615_RS01485;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=RM615_RS01485;old_locus_tag=RM615_01485 NZ_JAVRJW010000001.1 Protein Homology CDS 284763 285143 . + 0 ID=cds-WP_037572381.1;Parent=gene-RM615_RS01485;Dbxref=GenBank:WP_037572381.1;Name=WP_037572381.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=RM615_RS01485;product=glycine cleavage system protein GcvH;protein_id=WP_037572381.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 285226 285621 . + . ID=gene-RM615_RS01490;Name=RM615_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01490;old_locus_tag=RM615_01490 NZ_JAVRJW010000001.1 Protein Homology CDS 285226 285621 . + 0 ID=cds-WP_037572380.1;Parent=gene-RM615_RS01490;Dbxref=GenBank:WP_037572380.1;Name=WP_037572380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=RM615_RS01490;product=toprim domain-containing protein;protein_id=WP_037572380.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 285587 285907 . + . ID=gene-RM615_RS01495;Name=RM615_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01495;old_locus_tag=RM615_01495 NZ_JAVRJW010000001.1 Protein Homology CDS 285587 285907 . + 0 ID=cds-WP_037572379.1;Parent=gene-RM615_RS01495;Dbxref=GenBank:WP_037572379.1;Name=WP_037572379.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=RM615_RS01495;product=thioredoxin family protein;protein_id=WP_037572379.1;transl_table=11 NZ_JAVRJW010000001.1 cmsearch riboswitch 285947 286053 . + . ID=id-NZ_JAVRJW010000001.1:285947..286053;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000001.1 RefSeq gene 286146 287174 . + . ID=gene-RM615_RS01500;Name=RM615_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01500;old_locus_tag=RM615_01500 NZ_JAVRJW010000001.1 Protein Homology CDS 286146 287174 . + 0 ID=cds-WP_037572377.1;Parent=gene-RM615_RS01500;Dbxref=GenBank:WP_037572377.1;Name=WP_037572377.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082631.1;locus_tag=RM615_RS01500;product=methionine ABC transporter ATP-binding protein;protein_id=WP_037572377.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 287167 287862 . + . ID=gene-RM615_RS01505;Name=RM615_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01505;old_locus_tag=RM615_01505 NZ_JAVRJW010000001.1 Protein Homology CDS 287167 287862 . + 0 ID=cds-WP_037572375.1;Parent=gene-RM615_RS01505;Dbxref=GenBank:WP_037572375.1;Name=WP_037572375.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=RM615_RS01505;product=methionine ABC transporter permease;protein_id=WP_037572375.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 287887 288717 . + . ID=gene-RM615_RS01510;Name=RM615_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01510;old_locus_tag=RM615_01510 NZ_JAVRJW010000001.1 Protein Homology CDS 287887 288717 . + 0 ID=cds-WP_037572373.1;Parent=gene-RM615_RS01510;Dbxref=GenBank:WP_037572373.1;Name=WP_037572373.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614450.1;locus_tag=RM615_RS01510;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_037572373.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 289012 289863 . - . ID=gene-RM615_RS01515;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=RM615_RS01515;old_locus_tag=RM615_01515 NZ_JAVRJW010000001.1 Protein Homology CDS 289012 289863 . - 0 ID=cds-WP_037572371.1;Parent=gene-RM615_RS01515;Dbxref=GenBank:WP_037572371.1;Name=WP_037572371.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424577.1;locus_tag=RM615_RS01515;product=polyprenyl-phosphate transporter PopT;protein_id=WP_037572371.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 290167 290937 . + . ID=gene-RM615_RS01520;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=RM615_RS01520;old_locus_tag=RM615_01520 NZ_JAVRJW010000001.1 Protein Homology CDS 290167 290937 . + 0 ID=cds-WP_037572369.1;Parent=gene-RM615_RS01520;Dbxref=GenBank:WP_037572369.1;Name=WP_037572369.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=RM615_RS01520;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_037572369.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 290959 292266 . + . ID=gene-RM615_RS01525;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=RM615_RS01525;old_locus_tag=RM615_01525 NZ_JAVRJW010000001.1 Protein Homology CDS 290959 292266 . + 0 ID=cds-WP_136731953.1;Parent=gene-RM615_RS01525;Dbxref=GenBank:WP_136731953.1;Name=WP_136731953.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=RM615_RS01525;product=Fe-S cluster assembly protein SufD;protein_id=WP_136731953.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 292382 293623 . + . ID=gene-RM615_RS01530;Name=RM615_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01530;old_locus_tag=RM615_01530 NZ_JAVRJW010000001.1 Protein Homology CDS 292382 293623 . + 0 ID=cds-WP_103158909.1;Parent=gene-RM615_RS01530;Dbxref=GenBank:WP_103158909.1;Name=WP_103158909.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424580.1;locus_tag=RM615_RS01530;product=cysteine desulfurase;protein_id=WP_103158909.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 293613 294062 . + . ID=gene-RM615_RS01535;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=RM615_RS01535;old_locus_tag=RM615_01535 NZ_JAVRJW010000001.1 Protein Homology CDS 293613 294062 . + 0 ID=cds-WP_037572365.1;Parent=gene-RM615_RS01535;Dbxref=GenBank:WP_037572365.1;Name=WP_037572365.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=RM615_RS01535;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_037572365.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 294137 295534 . + . ID=gene-RM615_RS01540;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=RM615_RS01540;old_locus_tag=RM615_01540 NZ_JAVRJW010000001.1 Protein Homology CDS 294137 295534 . + 0 ID=cds-WP_037572364.1;Parent=gene-RM615_RS01540;Dbxref=GenBank:WP_037572364.1;Name=WP_037572364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=RM615_RS01540;product=Fe-S cluster assembly protein SufB;protein_id=WP_037572364.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 295759 296754 . + . ID=gene-RM615_RS01545;Name=RM615_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01545;old_locus_tag=RM615_01545 NZ_JAVRJW010000001.1 Protein Homology CDS 295759 296754 . + 0 ID=cds-WP_037572362.1;Parent=gene-RM615_RS01545;Dbxref=GenBank:WP_037572362.1;Name=WP_037572362.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=RM615_RS01545;product=hemolysin family protein;protein_id=WP_037572362.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 297319 298395 . + . ID=gene-RM615_RS01550;Name=RM615_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01550;old_locus_tag=RM615_01550 NZ_JAVRJW010000001.1 Protein Homology CDS 297319 298395 . + 0 ID=cds-WP_103158890.1;Parent=gene-RM615_RS01550;Dbxref=GenBank:WP_103158890.1;Name=WP_103158890.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166997.1;locus_tag=RM615_RS01550;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_103158890.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 298487 299182 . - . ID=gene-RM615_RS01555;Name=RM615_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01555;old_locus_tag=RM615_01555 NZ_JAVRJW010000001.1 Protein Homology CDS 298487 299182 . - 0 ID=cds-WP_165806188.1;Parent=gene-RM615_RS01555;Dbxref=GenBank:WP_165806188.1;Name=WP_165806188.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480031.1;locus_tag=RM615_RS01555;product=alpha/beta hydrolase;protein_id=WP_165806188.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 299306 300154 . + . ID=gene-RM615_RS01560;Name=RM615_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01560;old_locus_tag=RM615_01560 NZ_JAVRJW010000001.1 Protein Homology CDS 299306 300154 . + 0 ID=cds-WP_103158910.1;Parent=gene-RM615_RS01560;Dbxref=GenBank:WP_103158910.1;Name=WP_103158910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=RM615_RS01560;product=DUF72 domain-containing protein;protein_id=WP_103158910.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 300170 300994 . + . ID=gene-RM615_RS01565;Name=RM615_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01565;old_locus_tag=RM615_01565 NZ_JAVRJW010000001.1 Protein Homology CDS 300170 300994 . + 0 ID=cds-WP_037572356.1;Parent=gene-RM615_RS01565;Dbxref=GenBank:WP_037572356.1;Name=WP_037572356.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469689.1;locus_tag=RM615_RS01565;product=sulfite exporter TauE/SafE family protein;protein_id=WP_037572356.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 301007 302326 . + . ID=gene-RM615_RS01570;Name=RM615_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01570;old_locus_tag=RM615_01570 NZ_JAVRJW010000001.1 Protein Homology CDS 301007 302326 . + 0 ID=cds-WP_037572354.1;Parent=gene-RM615_RS01570;Dbxref=GenBank:WP_037572354.1;Name=WP_037572354.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424590.1;locus_tag=RM615_RS01570;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_037572354.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 302410 303327 . + . ID=gene-RM615_RS01575;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=RM615_RS01575;old_locus_tag=RM615_01575 NZ_JAVRJW010000001.1 Protein Homology CDS 302410 303327 . + 0 ID=cds-WP_037572352.1;Parent=gene-RM615_RS01575;Dbxref=GenBank:WP_037572352.1;Name=WP_037572352.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448197.1;locus_tag=RM615_RS01575;product=lipoyl synthase;protein_id=WP_037572352.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 303345 303710 . + . ID=gene-RM615_RS01580;Name=RM615_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01580;old_locus_tag=RM615_01580 NZ_JAVRJW010000001.1 Protein Homology CDS 303345 303710 . + 0 ID=cds-WP_037572349.1;Parent=gene-RM615_RS01580;Dbxref=GenBank:WP_037572349.1;Name=WP_037572349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=RM615_RS01580;product=YutD family protein;protein_id=WP_037572349.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 304241 304993 . + . ID=gene-RM615_RS01585;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM615_RS01585;old_locus_tag=RM615_01585 NZ_JAVRJW010000001.1 Protein Homology CDS 304241 304993 . + 0 ID=cds-WP_311540876.1;Parent=gene-RM615_RS01585;Dbxref=GenBank:WP_311540876.1;Name=WP_311540876.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: protein motif:HMM:NF014186.8;locus_tag=RM615_RS01585;product=membrane protein insertase YidC;protein_id=WP_311540876.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 305126 305392 . - . ID=gene-RM615_RS01590;Name=RM615_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01590;old_locus_tag=RM615_01590 NZ_JAVRJW010000001.1 Protein Homology CDS 305126 305392 . - 0 ID=cds-WP_103158895.1;Parent=gene-RM615_RS01590;Dbxref=GenBank:WP_103158895.1;Name=WP_103158895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=RM615_RS01590;product=DUF3055 domain-containing protein;protein_id=WP_103158895.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 305491 305928 . + . ID=gene-RM615_RS01595;Name=RM615_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01595;old_locus_tag=RM615_01595 NZ_JAVRJW010000001.1 Protein Homology CDS 305491 305928 . + 0 ID=cds-WP_037572343.1;Parent=gene-RM615_RS01595;Dbxref=GenBank:WP_037572343.1;Name=WP_037572343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424594.1;locus_tag=RM615_RS01595;product=DUF86 domain-containing protein;protein_id=WP_037572343.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 305925 306722 . + . ID=gene-RM615_RS01600;Name=nucF;gbkey=Gene;gene=nucF;gene_biotype=protein_coding;gene_synonym=yutF;locus_tag=RM615_RS01600;old_locus_tag=RM615_01600 NZ_JAVRJW010000001.1 Protein Homology CDS 305925 306722 . + 0 ID=cds-WP_037572340.1;Parent=gene-RM615_RS01600;Dbxref=GenBank:WP_037572340.1;Name=WP_037572340.1;Ontology_term=GO:0008253,GO:0016791,GO:0046872;gbkey=CDS;gene=nucF;go_function=5'-nucleotidase activity|0008253||IEA,phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424595.1;locus_tag=RM615_RS01600;product=5' nucleotidase NucF;protein_id=WP_037572340.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 306715 307680 . + . ID=gene-RM615_RS01605;Name=RM615_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01605;old_locus_tag=RM615_01605 NZ_JAVRJW010000001.1 Protein Homology CDS 306715 307680 . + 0 ID=cds-WP_311540616.1;Parent=gene-RM615_RS01605;Dbxref=GenBank:WP_311540616.1;Name=WP_311540616.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=RM615_RS01605;product=2-hydroxyacid dehydrogenase;protein_id=WP_311540616.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 307849 308994 . - . ID=gene-RM615_RS01610;Name=RM615_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01610;old_locus_tag=RM615_01610 NZ_JAVRJW010000001.1 Protein Homology CDS 307849 308994 . - 0 ID=cds-WP_105996710.1;Parent=gene-RM615_RS01610;Dbxref=GenBank:WP_105996710.1;Name=WP_105996710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013752.7;locus_tag=RM615_RS01610;product=transposase;protein_id=WP_105996710.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 309043 309717 . - . ID=gene-RM615_RS01615;Name=RM615_RS01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS01615;old_locus_tag=RM615_01615;pseudo=true NZ_JAVRJW010000001.1 Protein Homology CDS 309043 309717 . - 0 ID=cds-RM615_RS01615;Parent=gene-RM615_RS01615;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM615_RS01615;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 309754 310065 . - . ID=gene-RM615_RS11160;Name=RM615_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11160 NZ_JAVRJW010000001.1 Protein Homology CDS 309754 310065 . - 0 ID=cds-WP_311542853.1;Parent=gene-RM615_RS11160;Dbxref=GenBank:WP_311542853.1;Name=WP_311542853.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.7;locus_tag=RM615_RS11160;product=DDE-type integrase/transposase/recombinase;protein_id=WP_311542853.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 310120 311415 . - . ID=gene-RM615_RS01620;Name=RM615_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01620;old_locus_tag=RM615_01620 NZ_JAVRJW010000001.1 Protein Homology CDS 310120 311415 . - 0 ID=cds-WP_232160109.1;Parent=gene-RM615_RS01620;Dbxref=GenBank:WP_232160109.1;Name=WP_232160109.1;Ontology_term=GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010632377.1;locus_tag=RM615_RS01620;product=SLC45 family MFS transporter;protein_id=WP_232160109.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 311674 312669 . - . ID=gene-RM615_RS01625;Name=RM615_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01625;old_locus_tag=RM615_01625 NZ_JAVRJW010000001.1 Protein Homology CDS 311674 312669 . - 0 ID=cds-WP_037572331.1;Parent=gene-RM615_RS01625;Dbxref=GenBank:WP_037572331.1;Name=WP_037572331.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004436347.1;locus_tag=RM615_RS01625;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_037572331.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 312983 314641 . + . ID=gene-RM615_RS01630;Name=RM615_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01630;old_locus_tag=RM615_01630 NZ_JAVRJW010000001.1 Protein Homology CDS 312983 314641 . + 0 ID=cds-WP_233664354.1;Parent=gene-RM615_RS01630;Dbxref=GenBank:WP_233664354.1;Name=WP_233664354.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275704.1;locus_tag=RM615_RS01630;product=glycoside hydrolase family 13 protein;protein_id=WP_233664354.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 314871 315029 . - . ID=gene-RM615_RS01635;Name=RM615_RS01635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS01635;old_locus_tag=RM615_01635;partial=true;pseudo=true;start_range=.,314871 NZ_JAVRJW010000001.1 Protein Homology CDS 314871 315029 . - 0 ID=cds-RM615_RS01635;Parent=gene-RM615_RS01635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM615_RS01635;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,314871;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 315084 315473 . - . ID=gene-RM615_RS01640;Name=RM615_RS01640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS01640;old_locus_tag=RM615_01640;partial=true;pseudo=true;start_range=.,315084 NZ_JAVRJW010000001.1 Protein Homology CDS 315084 315473 . - 0 ID=cds-RM615_RS01640;Parent=gene-RM615_RS01640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277741.1;locus_tag=RM615_RS01640;partial=true;product=transposase;pseudo=true;start_range=.,315084;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 315968 316099 . + . ID=gene-RM615_RS01645;Name=RM615_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01645;old_locus_tag=RM615_01645 NZ_JAVRJW010000001.1 Protein Homology CDS 315968 316099 . + 0 ID=cds-WP_084275967.1;Parent=gene-RM615_RS01645;Dbxref=GenBank:WP_084275967.1;Name=WP_084275967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=RM615_RS01645;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_084275967.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 316118 317572 . + . ID=gene-RM615_RS01650;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=RM615_RS01650;old_locus_tag=RM615_01650 NZ_JAVRJW010000001.1 Protein Homology CDS 316118 317572 . + 0 ID=cds-WP_103158896.1;Parent=gene-RM615_RS01650;Dbxref=GenBank:WP_103158896.1;Name=WP_103158896.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129644.1;locus_tag=RM615_RS01650;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_103158896.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 317569 318789 . + . ID=gene-RM615_RS01655;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=RM615_RS01655;old_locus_tag=RM615_01655 NZ_JAVRJW010000001.1 Protein Homology CDS 317569 318789 . + 0 ID=cds-WP_311540877.1;Parent=gene-RM615_RS01655;Dbxref=GenBank:WP_311540877.1;Name=WP_311540877.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=RM615_RS01655;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_311540877.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 318806 319042 . + . ID=gene-RM615_RS01660;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=RM615_RS01660;old_locus_tag=RM615_01660 NZ_JAVRJW010000001.1 Protein Homology CDS 318806 319042 . + 0 ID=cds-WP_103158897.1;Parent=gene-RM615_RS01660;Dbxref=GenBank:WP_103158897.1;Name=WP_103158897.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=RM615_RS01660;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WP_103158897.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 319039 320187 . + . ID=gene-RM615_RS01665;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=RM615_RS01665;old_locus_tag=RM615_01665 NZ_JAVRJW010000001.1 Protein Homology CDS 319039 320187 . + 0 ID=cds-WP_037572317.1;Parent=gene-RM615_RS01665;Dbxref=GenBank:WP_037572317.1;Name=WP_037572317.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424679.1;locus_tag=RM615_RS01665;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_037572317.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 320326 320568 . - . ID=gene-RM615_RS01670;Name=RM615_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01670;old_locus_tag=RM615_01670 NZ_JAVRJW010000001.1 Protein Homology CDS 320326 320568 . - 0 ID=cds-WP_037572314.1;Parent=gene-RM615_RS01670;Dbxref=GenBank:WP_037572314.1;Name=WP_037572314.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=RM615_RS01670;product=NifU family protein;protein_id=WP_037572314.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 320673 320993 . + . ID=gene-RM615_RS01675;Name=RM615_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01675;old_locus_tag=RM615_01675 NZ_JAVRJW010000001.1 Protein Homology CDS 320673 320993 . + 0 ID=cds-WP_037572310.1;Parent=gene-RM615_RS01675;Dbxref=GenBank:WP_037572310.1;Name=WP_037572310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276281.1;locus_tag=RM615_RS01675;product=YuzD family protein;protein_id=WP_037572310.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 321335 322399 . - . ID=gene-RM615_RS01680;Name=RM615_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01680;old_locus_tag=RM615_01680 NZ_JAVRJW010000001.1 Protein Homology CDS 321335 322399 . - 0 ID=cds-WP_037572307.1;Parent=gene-RM615_RS01680;Dbxref=GenBank:WP_037572307.1;Name=WP_037572307.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794016.1;locus_tag=RM615_RS01680;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572307.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 322695 322931 . + . ID=gene-RM615_RS01685;Name=RM615_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01685;old_locus_tag=RM615_01685 NZ_JAVRJW010000001.1 Protein Homology CDS 322695 322931 . + 0 ID=cds-WP_103158898.1;Parent=gene-RM615_RS01685;Dbxref=GenBank:WP_103158898.1;Name=WP_103158898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499429.1;locus_tag=RM615_RS01685;product=YuzB family protein;protein_id=WP_103158898.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 322945 323304 . + . ID=gene-RM615_RS01690;Name=RM615_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01690;old_locus_tag=RM615_01690 NZ_JAVRJW010000001.1 Protein Homology CDS 322945 323304 . + 0 ID=cds-WP_103158899.1;Parent=gene-RM615_RS01690;Dbxref=GenBank:WP_103158899.1;Name=WP_103158899.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=RM615_RS01690;product=HesB/IscA family protein;protein_id=WP_103158899.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 323551 324753 . + . ID=gene-RM615_RS01695;Name=RM615_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01695;old_locus_tag=RM615_01695 NZ_JAVRJW010000001.1 Protein Homology CDS 323551 324753 . + 0 ID=cds-WP_037572298.1;Parent=gene-RM615_RS01695;Dbxref=GenBank:WP_037572298.1;Name=WP_037572298.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=RM615_RS01695;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572298.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 324835 326313 . + . ID=gene-RM615_RS01700;Name=RM615_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01700;old_locus_tag=RM615_01700 NZ_JAVRJW010000001.1 Protein Homology CDS 324835 326313 . + 0 ID=cds-WP_103158900.1;Parent=gene-RM615_RS01700;Dbxref=GenBank:WP_103158900.1;Name=WP_103158900.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383447.1;locus_tag=RM615_RS01700;product=M17 family metallopeptidase;protein_id=WP_103158900.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 326449 327762 . + . ID=gene-RM615_RS01705;Name=RM615_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01705;old_locus_tag=RM615_01705 NZ_JAVRJW010000001.1 Protein Homology CDS 326449 327762 . + 0 ID=cds-WP_103158901.1;Parent=gene-RM615_RS01705;Dbxref=GenBank:WP_103158901.1;Name=WP_103158901.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=RM615_RS01705;product=Na+/H+ antiporter family protein;protein_id=WP_103158901.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 327784 328158 . + . ID=gene-RM615_RS01710;Name=RM615_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01710;old_locus_tag=RM615_01710 NZ_JAVRJW010000001.1 Protein Homology CDS 327784 328158 . + 0 ID=cds-WP_103158902.1;Parent=gene-RM615_RS01710;Dbxref=GenBank:WP_103158902.1;Name=WP_103158902.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467045.1;locus_tag=RM615_RS01710;product=PaaI family thioesterase;protein_id=WP_103158902.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 328221 328577 . - . ID=gene-RM615_RS01715;Name=RM615_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01715;old_locus_tag=RM615_01715 NZ_JAVRJW010000001.1 Protein Homology CDS 328221 328577 . - 0 ID=cds-WP_037572287.1;Parent=gene-RM615_RS01715;Dbxref=GenBank:WP_037572287.1;Name=WP_037572287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=RM615_RS01715;product=Na+/H+ antiporter subunit G1;protein_id=WP_037572287.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 328555 328848 . - . ID=gene-RM615_RS01720;Name=RM615_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01720;old_locus_tag=RM615_01720 NZ_JAVRJW010000001.1 Protein Homology CDS 328555 328848 . - 0 ID=cds-WP_037572285.1;Parent=gene-RM615_RS01720;Dbxref=GenBank:WP_037572285.1;Name=WP_037572285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=RM615_RS01720;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_037572285.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 328845 329327 . - . ID=gene-RM615_RS01725;Name=RM615_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01725;old_locus_tag=RM615_01725 NZ_JAVRJW010000001.1 Protein Homology CDS 328845 329327 . - 0 ID=cds-WP_037572284.1;Parent=gene-RM615_RS01725;Dbxref=GenBank:WP_037572284.1;Name=WP_037572284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=RM615_RS01725;product=Na+/H+ antiporter subunit E;protein_id=WP_037572284.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 329328 330827 . - . ID=gene-RM615_RS01730;Name=RM615_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01730;old_locus_tag=RM615_01730 NZ_JAVRJW010000001.1 Protein Homology CDS 329328 330827 . - 0 ID=cds-WP_311540878.1;Parent=gene-RM615_RS01730;Dbxref=GenBank:WP_311540878.1;Name=WP_311540878.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722348.1;locus_tag=RM615_RS01730;product=Na+/H+ antiporter subunit D;protein_id=WP_311540878.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 330817 331164 . - . ID=gene-RM615_RS01735;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=RM615_RS01735;old_locus_tag=RM615_01735 NZ_JAVRJW010000001.1 Protein Homology CDS 330817 331164 . - 0 ID=cds-WP_037572280.1;Parent=gene-RM615_RS01735;Dbxref=GenBank:WP_037572280.1;Name=WP_037572280.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614416.1;locus_tag=RM615_RS01735;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_037572280.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 331164 331610 . - . ID=gene-RM615_RS01740;Name=RM615_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01740;old_locus_tag=RM615_01740 NZ_JAVRJW010000001.1 Protein Homology CDS 331164 331610 . - 0 ID=cds-WP_084275994.1;Parent=gene-RM615_RS01740;Dbxref=GenBank:WP_084275994.1;Name=WP_084275994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=RM615_RS01740;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_084275994.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 331573 333990 . - . ID=gene-RM615_RS01745;Name=RM615_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01745;old_locus_tag=RM615_01745 NZ_JAVRJW010000001.1 Protein Homology CDS 331573 333990 . - 0 ID=cds-WP_103158904.1;Parent=gene-RM615_RS01745;Dbxref=GenBank:WP_103158904.1;Name=WP_103158904.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=RM615_RS01745;product=Na+/H+ antiporter subunit A;protein_id=WP_103158904.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 334132 334512 . - . ID=gene-RM615_RS01750;Name=RM615_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01750;old_locus_tag=RM615_01750 NZ_JAVRJW010000001.1 Protein Homology CDS 334132 334512 . - 0 ID=cds-WP_037572273.1;Parent=gene-RM615_RS01750;Dbxref=GenBank:WP_037572273.1;Name=WP_037572273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831990.1;locus_tag=RM615_RS01750;product=kinase-associated lipoprotein B;protein_id=WP_037572273.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 334585 335190 . + . ID=gene-RM615_RS01755;Name=RM615_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01755;old_locus_tag=RM615_01755 NZ_JAVRJW010000001.1 Protein Homology CDS 334585 335190 . + 0 ID=cds-WP_037572270.1;Parent=gene-RM615_RS01755;Dbxref=GenBank:WP_037572270.1;Name=WP_037572270.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276264.1;locus_tag=RM615_RS01755;product=peptidylprolyl isomerase;protein_id=WP_037572270.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 335224 335487 . + . ID=gene-RM615_RS01760;Name=RM615_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01760;old_locus_tag=RM615_01760 NZ_JAVRJW010000001.1 Protein Homology CDS 335224 335487 . + 0 ID=cds-WP_037572266.1;Parent=gene-RM615_RS01760;Dbxref=GenBank:WP_037572266.1;Name=WP_037572266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=RM615_RS01760;product=DUF1871 family protein;protein_id=WP_037572266.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 335898 337088 . + . ID=gene-RM615_RS01765;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=RM615_RS01765;old_locus_tag=RM615_01765 NZ_JAVRJW010000001.1 Protein Homology CDS 335898 337088 . + 0 ID=cds-WP_037572263.1;Parent=gene-RM615_RS01765;Dbxref=GenBank:WP_037572263.1;Name=WP_037572263.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383466.1;locus_tag=RM615_RS01765;product=formamidase;protein_id=WP_037572263.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 337088 337357 . + . ID=gene-RM615_RS01770;Name=RM615_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01770;old_locus_tag=RM615_01770 NZ_JAVRJW010000001.1 Protein Homology CDS 337088 337357 . + 0 ID=cds-WP_037572261.1;Parent=gene-RM615_RS01770;Dbxref=GenBank:WP_037572261.1;Name=WP_037572261.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=RM615_RS01770;product=FmdB family zinc ribbon protein;protein_id=WP_037572261.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 337523 337909 . + . ID=gene-RM615_RS01775;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=RM615_RS01775;old_locus_tag=RM615_01775 NZ_JAVRJW010000001.1 Protein Homology CDS 337523 337909 . + 0 ID=cds-WP_037572258.1;Parent=gene-RM615_RS01775;Dbxref=GenBank:WP_037572258.1;Name=WP_037572258.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=RM615_RS01775;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_037572258.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 338241 339785 . + . ID=gene-RM615_RS01780;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=RM615_RS01780;old_locus_tag=RM615_01780 NZ_JAVRJW010000001.1 Protein Homology CDS 338241 339785 . + 0 ID=cds-WP_103158905.1;Parent=gene-RM615_RS01780;Dbxref=GenBank:WP_103158905.1;Name=WP_103158905.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=RM615_RS01780;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_103158905.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 340009 341208 . + . ID=gene-RM615_RS01785;Name=RM615_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01785;old_locus_tag=RM615_01785 NZ_JAVRJW010000001.1 Protein Homology CDS 340009 341208 . + 0 ID=cds-WP_037572251.1;Parent=gene-RM615_RS01785;Dbxref=GenBank:WP_037572251.1;Name=WP_037572251.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424621.1;locus_tag=RM615_RS01785;product=ornithine--oxo-acid transaminase;protein_id=WP_037572251.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 341369 342613 . + . ID=gene-RM615_RS01790;Name=RM615_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01790;old_locus_tag=RM615_01790 NZ_JAVRJW010000001.1 Protein Homology CDS 341369 342613 . + 0 ID=cds-WP_037572248.1;Parent=gene-RM615_RS01790;Dbxref=GenBank:WP_037572248.1;Name=WP_037572248.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=RM615_RS01790;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_037572248.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 342666 343601 . - . ID=gene-RM615_RS01795;Name=RM615_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01795;old_locus_tag=RM615_01795 NZ_JAVRJW010000001.1 Protein Homology CDS 342666 343601 . - 0 ID=cds-WP_037572245.1;Parent=gene-RM615_RS01795;Dbxref=GenBank:WP_037572245.1;Name=WP_037572245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175845.1;locus_tag=RM615_RS01795;product=glycerophosphodiester phosphodiesterase;protein_id=WP_037572245.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 343755 345128 . - . ID=gene-RM615_RS01800;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=RM615_RS01800;old_locus_tag=RM615_01800 NZ_JAVRJW010000001.1 Protein Homology CDS 343755 345128 . - 0 ID=cds-WP_165806182.1;Parent=gene-RM615_RS01800;Dbxref=GenBank:WP_165806182.1;Name=WP_165806182.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481867.1;locus_tag=RM615_RS01800;product=argininosuccinate lyase;protein_id=WP_165806182.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 345121 346326 . - . ID=gene-RM615_RS01805;Name=RM615_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01805;old_locus_tag=RM615_01805 NZ_JAVRJW010000001.1 Protein Homology CDS 345121 346326 . - 0 ID=cds-WP_165806181.1;Parent=gene-RM615_RS01805;Dbxref=GenBank:WP_165806181.1;Name=WP_165806181.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637420.1;locus_tag=RM615_RS01805;product=argininosuccinate synthase;protein_id=WP_165806181.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 346515 347846 . + . ID=gene-RM615_RS01810;Name=RM615_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01810;old_locus_tag=RM615_01810 NZ_JAVRJW010000001.1 Protein Homology CDS 346515 347846 . + 0 ID=cds-WP_165806180.1;Parent=gene-RM615_RS01810;Dbxref=GenBank:WP_165806180.1;Name=WP_165806180.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=RM615_RS01810;product=glucose-6-phosphate isomerase;protein_id=WP_165806180.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 347989 348510 . + . ID=gene-RM615_RS01815;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM615_RS01815;old_locus_tag=RM615_01815 NZ_JAVRJW010000001.1 Protein Homology CDS 347989 348510 . + 0 ID=cds-WP_037572234.1;Parent=gene-RM615_RS01815;Dbxref=GenBank:WP_037572234.1;Name=WP_037572234.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: protein motif:HMM:NF021981.7;locus_tag=RM615_RS01815;product=signal peptidase I;protein_id=WP_037572234.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 348522 349103 . + . ID=gene-RM615_RS01820;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM615_RS01820;old_locus_tag=RM615_01820 NZ_JAVRJW010000001.1 Protein Homology CDS 348522 349103 . + 0 ID=cds-WP_037573035.1;Parent=gene-RM615_RS01820;Dbxref=GenBank:WP_037573035.1;Name=WP_037573035.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424628.1;locus_tag=RM615_RS01820;product=signal peptidase I;protein_id=WP_037573035.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 349403 352864 . + . ID=gene-RM615_RS01825;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=RM615_RS01825;old_locus_tag=RM615_01825 NZ_JAVRJW010000001.1 Protein Homology CDS 349403 352864 . + 0 ID=cds-WP_107370369.1;Parent=gene-RM615_RS01825;Dbxref=GenBank:WP_107370369.1;Name=WP_107370369.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=RM615_RS01825;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_107370369.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 352851 356489 . + . ID=gene-RM615_RS01830;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=RM615_RS01830;old_locus_tag=RM615_01830 NZ_JAVRJW010000001.1 Protein Homology CDS 352851 356489 . + 0 ID=cds-WP_311539223.1;Parent=gene-RM615_RS01830;Dbxref=GenBank:WP_311539223.1;Name=WP_311539223.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235847.1;locus_tag=RM615_RS01830;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_311539223.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 356568 357470 . + . ID=gene-RM615_RS01835;Name=RM615_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01835;old_locus_tag=RM615_01835 NZ_JAVRJW010000001.1 Protein Homology CDS 356568 357470 . + 0 ID=cds-WP_311539222.1;Parent=gene-RM615_RS01835;Dbxref=GenBank:WP_311539222.1;Name=WP_311539222.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499459.1;locus_tag=RM615_RS01835;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_311539222.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 357722 358111 . + . ID=gene-RM615_RS01840;Name=RM615_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01840;old_locus_tag=RM615_01840 NZ_JAVRJW010000001.1 Protein Homology CDS 357722 358111 . + 0 ID=cds-WP_037572226.1;Parent=gene-RM615_RS01840;Dbxref=GenBank:WP_037572226.1;Name=WP_037572226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=RM615_RS01840;product=YisL family protein;protein_id=WP_037572226.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 358258 359580 . - . ID=gene-RM615_RS01845;Name=RM615_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01845;old_locus_tag=RM615_01845 NZ_JAVRJW010000001.1 Protein Homology CDS 358258 359580 . - 0 ID=cds-WP_145401193.1;Parent=gene-RM615_RS01845;Dbxref=GenBank:WP_145401193.1;Name=WP_145401193.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=RM615_RS01845;product=CoA-disulfide reductase;protein_id=WP_145401193.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 359583 360419 . - . ID=gene-RM615_RS01850;Name=RM615_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01850;old_locus_tag=RM615_01850 NZ_JAVRJW010000001.1 Protein Homology CDS 359583 360419 . - 0 ID=cds-WP_037572223.1;Parent=gene-RM615_RS01850;Dbxref=GenBank:WP_037572223.1;Name=WP_037572223.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483780.1;locus_tag=RM615_RS01850;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037572223.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 360532 360840 . + . ID=gene-RM615_RS01855;Name=RM615_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01855;old_locus_tag=RM615_01855 NZ_JAVRJW010000001.1 Protein Homology CDS 360532 360840 . + 0 ID=cds-WP_037572221.1;Parent=gene-RM615_RS01855;Dbxref=GenBank:WP_037572221.1;Name=WP_037572221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=RM615_RS01855;product=metal-sulfur cluster assembly factor;protein_id=WP_037572221.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 361066 363675 . + . ID=gene-RM615_RS01860;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=RM615_RS01860;old_locus_tag=RM615_01860 NZ_JAVRJW010000001.1 Protein Homology CDS 361066 363675 . + 0 ID=cds-WP_311539221.1;Parent=gene-RM615_RS01860;Dbxref=GenBank:WP_311539221.1;Name=WP_311539221.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167299.1;locus_tag=RM615_RS01860;product=ATP-dependent chaperone ClpB;protein_id=WP_311539221.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 363810 364010 . - . ID=gene-RM615_RS01865;Name=RM615_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01865;old_locus_tag=RM615_01865 NZ_JAVRJW010000001.1 Protein Homology CDS 363810 364010 . - 0 ID=cds-WP_037572217.1;Parent=gene-RM615_RS01865;Dbxref=GenBank:WP_037572217.1;Name=WP_037572217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165998.1;locus_tag=RM615_RS01865;product=DUF2929 family protein;protein_id=WP_037572217.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 364161 365102 . + . ID=gene-RM615_RS01870;Name=RM615_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01870;old_locus_tag=RM615_01870 NZ_JAVRJW010000001.1 Protein Homology CDS 364161 365102 . + 0 ID=cds-WP_037572215.1;Parent=gene-RM615_RS01870;Dbxref=GenBank:WP_037572215.1;Name=WP_037572215.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=RM615_RS01870;product=beta-ketoacyl-ACP synthase III;protein_id=WP_037572215.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 365119 366363 . + . ID=gene-RM615_RS01875;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=RM615_RS01875;old_locus_tag=RM615_01875 NZ_JAVRJW010000001.1 Protein Homology CDS 365119 366363 . + 0 ID=cds-WP_311540879.1;Parent=gene-RM615_RS01875;Dbxref=GenBank:WP_311540879.1;Name=WP_311540879.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=RM615_RS01875;product=beta-ketoacyl-ACP synthase II;protein_id=WP_311540879.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 366685 367065 . - . ID=gene-RM615_RS01880;Name=RM615_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01880;old_locus_tag=RM615_01880 NZ_JAVRJW010000001.1 Protein Homology CDS 366685 367065 . - 0 ID=cds-WP_037572210.1;Parent=gene-RM615_RS01880;Dbxref=GenBank:WP_037572210.1;Name=WP_037572210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024438.7;locus_tag=RM615_RS01880;product=DUF3899 domain-containing protein;protein_id=WP_037572210.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 367312 368238 . + . ID=gene-RM615_RS01885;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=RM615_RS01885;old_locus_tag=RM615_01885 NZ_JAVRJW010000001.1 Protein Homology CDS 367312 368238 . + 0 ID=cds-WP_105965169.1;Parent=gene-RM615_RS01885;Dbxref=GenBank:WP_105965169.1;Name=WP_105965169.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=RM615_RS01885;product=oligopeptide ABC transporter permease;protein_id=WP_105965169.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 368238 369299 . + . ID=gene-RM615_RS01890;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=RM615_RS01890;old_locus_tag=RM615_01890 NZ_JAVRJW010000001.1 Protein Homology CDS 368238 369299 . + 0 ID=cds-WP_037572204.1;Parent=gene-RM615_RS01890;Dbxref=GenBank:WP_037572204.1;Name=WP_037572204.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=RM615_RS01890;product=oligopeptide ABC transporter permease;protein_id=WP_037572204.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 369314 370387 . + . ID=gene-RM615_RS01895;Name=RM615_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01895;old_locus_tag=RM615_01895 NZ_JAVRJW010000001.1 Protein Homology CDS 369314 370387 . + 0 ID=cds-WP_037572201.1;Parent=gene-RM615_RS01895;Dbxref=GenBank:WP_037572201.1;Name=WP_037572201.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424645.1;locus_tag=RM615_RS01895;product=ABC transporter ATP-binding protein;protein_id=WP_037572201.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 370387 371325 . + . ID=gene-RM615_RS01900;Name=RM615_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01900;old_locus_tag=RM615_01900 NZ_JAVRJW010000001.1 Protein Homology CDS 370387 371325 . + 0 ID=cds-WP_037572198.1;Parent=gene-RM615_RS01900;Dbxref=GenBank:WP_037572198.1;Name=WP_037572198.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459519.1;locus_tag=RM615_RS01900;product=ABC transporter ATP-binding protein;protein_id=WP_037572198.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 371391 373016 . + . ID=gene-RM615_RS01905;Name=RM615_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01905;old_locus_tag=RM615_01905 NZ_JAVRJW010000001.1 Protein Homology CDS 371391 373016 . + 0 ID=cds-WP_228512597.1;Parent=gene-RM615_RS01905;Dbxref=GenBank:WP_228512597.1;Name=WP_228512597.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=RM615_RS01905;product=peptide ABC transporter substrate-binding protein;protein_id=WP_228512597.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 373131 374123 . - . ID=gene-RM615_RS01910;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=RM615_RS01910;old_locus_tag=RM615_01910 NZ_JAVRJW010000001.1 Protein Homology CDS 373131 374123 . - 0 ID=cds-WP_037572193.1;Parent=gene-RM615_RS01910;Dbxref=GenBank:WP_037572193.1;Name=WP_037572193.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424648.1;locus_tag=RM615_RS01910;product=tryptophan--tRNA ligase;protein_id=WP_037572193.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 374428 374823 . + . ID=gene-RM615_RS01915;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=RM615_RS01915;old_locus_tag=RM615_01915 NZ_JAVRJW010000001.1 Protein Homology CDS 374428 374823 . + 0 ID=cds-WP_037572189.1;Parent=gene-RM615_RS01915;Dbxref=GenBank:WP_037572189.1;Name=WP_037572189.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=RM615_RS01915;product=transcriptional regulator SpxA;protein_id=WP_037572189.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 375049 375762 . + . ID=gene-RM615_RS01920;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=RM615_RS01920;old_locus_tag=RM615_01920 NZ_JAVRJW010000001.1 Protein Homology CDS 375049 375762 . + 0 ID=cds-WP_037572185.1;Parent=gene-RM615_RS01920;Dbxref=GenBank:WP_037572185.1;Name=WP_037572185.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424650.1;locus_tag=RM615_RS01920;product=adaptor protein MecA;protein_id=WP_037572185.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 375984 376955 . + . ID=gene-RM615_RS01925;Name=RM615_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01925;old_locus_tag=RM615_01925 NZ_JAVRJW010000001.1 Protein Homology CDS 375984 376955 . + 0 ID=cds-WP_311539219.1;Parent=gene-RM615_RS01925;Dbxref=GenBank:WP_311539219.1;Name=WP_311539219.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF017832.8;locus_tag=RM615_RS01925;product=competence protein CoiA;protein_id=WP_311539219.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 377026 378834 . + . ID=gene-RM615_RS01930;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM615_RS01930;old_locus_tag=RM615_01930 NZ_JAVRJW010000001.1 Protein Homology CDS 377026 378834 . + 0 ID=cds-WP_105962984.1;Parent=gene-RM615_RS01930;Dbxref=GenBank:WP_105962984.1;Name=WP_105962984.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=RM615_RS01930;product=oligoendopeptidase F;protein_id=WP_105962984.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 379094 379888 . - . ID=gene-RM615_RS01935;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=RM615_RS01935;old_locus_tag=RM615_01935 NZ_JAVRJW010000001.1 Protein Homology CDS 379094 379888 . - 0 ID=cds-WP_037572173.1;Parent=gene-RM615_RS01935;Dbxref=GenBank:WP_037572173.1;Name=WP_037572173.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=RM615_RS01935;product=protease adaptor protein YjbH;protein_id=WP_037572173.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 379903 380274 . - . ID=gene-RM615_RS01940;Name=RM615_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01940;old_locus_tag=RM615_01940 NZ_JAVRJW010000001.1 Protein Homology CDS 379903 380274 . - 0 ID=cds-WP_037572171.1;Parent=gene-RM615_RS01940;Dbxref=GenBank:WP_037572171.1;Name=WP_037572171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722302.1;locus_tag=RM615_RS01940;product=truncated hemoglobin YjbI;protein_id=WP_037572171.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 380363 380953 . - . ID=gene-RM615_RS01945;Name=RM615_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01945;old_locus_tag=RM615_01945 NZ_JAVRJW010000001.1 Protein Homology CDS 380363 380953 . - 0 ID=cds-WP_037572169.1;Parent=gene-RM615_RS01945;Dbxref=GenBank:WP_037572169.1;Name=WP_037572169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637390.1;locus_tag=RM615_RS01945;product=CYTH domain-containing protein;protein_id=WP_037572169.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 381155 381502 . + . ID=gene-RM615_RS01950;Name=RM615_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01950;old_locus_tag=RM615_01950 NZ_JAVRJW010000001.1 Protein Homology CDS 381155 381502 . + 0 ID=cds-WP_103159390.1;Parent=gene-RM615_RS01950;Dbxref=GenBank:WP_103159390.1;Name=WP_103159390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167279.1;locus_tag=RM615_RS01950;product=UPF0738 family protein;protein_id=WP_103159390.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 381519 382163 . + . ID=gene-RM615_RS01955;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=RM615_RS01955;old_locus_tag=RM615_01955 NZ_JAVRJW010000001.1 Protein Homology CDS 381519 382163 . + 0 ID=cds-WP_037572160.1;Parent=gene-RM615_RS01955;Dbxref=GenBank:WP_037572160.1;Name=WP_037572160.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424659.1;locus_tag=RM615_RS01955;product=GTP diphosphokinase;protein_id=WP_037572160.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 382163 382972 . + . ID=gene-RM615_RS01960;Name=RM615_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01960;old_locus_tag=RM615_01960 NZ_JAVRJW010000001.1 Protein Homology CDS 382163 382972 . + 0 ID=cds-WP_037572157.1;Parent=gene-RM615_RS01960;Dbxref=GenBank:WP_037572157.1;Name=WP_037572157.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=RM615_RS01960;product=NAD kinase;protein_id=WP_037572157.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 382969 383823 . + . ID=gene-RM615_RS01965;Name=RM615_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01965;old_locus_tag=RM615_01965 NZ_JAVRJW010000001.1 Protein Homology CDS 382969 383823 . + 0 ID=cds-WP_103159391.1;Parent=gene-RM615_RS01965;Dbxref=GenBank:WP_103159391.1;Name=WP_103159391.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=RM615_RS01965;product=RluA family pseudouridine synthase;protein_id=WP_103159391.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 383894 385237 . + . ID=gene-RM615_RS01970;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=RM615_RS01970;old_locus_tag=RM615_01970 NZ_JAVRJW010000001.1 Protein Homology CDS 383894 385237 . + 0 ID=cds-WP_103159406.1;Parent=gene-RM615_RS01970;Dbxref=GenBank:WP_103159406.1;Name=WP_103159406.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383551.1;locus_tag=RM615_RS01970;product=magnesium transporter;protein_id=WP_103159406.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 385248 387083 . + . ID=gene-RM615_RS01975;Name=RM615_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01975;old_locus_tag=RM615_01975 NZ_JAVRJW010000001.1 Protein Homology CDS 385248 387083 . + 0 ID=cds-WP_037572148.1;Parent=gene-RM615_RS01975;Dbxref=GenBank:WP_037572148.1;Name=WP_037572148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=RM615_RS01975;product=monovalent cation:proton antiporter family protein;protein_id=WP_037572148.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 387260 388030 . + . ID=gene-RM615_RS01980;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=RM615_RS01980;old_locus_tag=RM615_01980 NZ_JAVRJW010000001.1 Protein Homology CDS 387260 388030 . + 0 ID=cds-WP_037572145.1;Parent=gene-RM615_RS01980;Dbxref=GenBank:WP_037572145.1;Name=WP_037572145.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=RM615_RS01980;product=enoyl-ACP reductase FabI;protein_id=WP_037572145.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 388178 389275 . - . ID=gene-RM615_RS01985;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=RM615_RS01985;old_locus_tag=RM615_01985 NZ_JAVRJW010000001.1 Protein Homology CDS 388178 389275 . - 0 ID=cds-WP_037572143.1;Parent=gene-RM615_RS01985;Dbxref=GenBank:WP_037572143.1;Name=WP_037572143.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=RM615_RS01985;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_037572143.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 389475 391055 . + . ID=gene-RM615_RS01990;Name=RM615_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01990;old_locus_tag=RM615_01990 NZ_JAVRJW010000001.1 Protein Homology CDS 389475 391055 . + 0 ID=cds-WP_037572141.1;Parent=gene-RM615_RS01990;Dbxref=GenBank:WP_037572141.1;Name=WP_037572141.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899872.1;locus_tag=RM615_RS01990;product=alanine/glycine:cation symporter family protein;protein_id=WP_037572141.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 391232 391969 . + . ID=gene-RM615_RS01995;Name=RM615_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS01995;old_locus_tag=RM615_01995 NZ_JAVRJW010000001.1 Protein Homology CDS 391232 391969 . + 0 ID=cds-WP_037573034.1;Parent=gene-RM615_RS01995;Dbxref=GenBank:WP_037573034.1;Name=WP_037573034.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450759.1;locus_tag=RM615_RS01995;product=esterase family protein;protein_id=WP_037573034.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 392020 392529 . + . ID=gene-RM615_RS02000;Name=RM615_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02000;old_locus_tag=RM615_02000 NZ_JAVRJW010000001.1 Protein Homology CDS 392020 392529 . + 0 ID=cds-WP_037572139.1;Parent=gene-RM615_RS02000;Dbxref=GenBank:WP_037572139.1;Name=WP_037572139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494354.1;locus_tag=RM615_RS02000;product=2'-5' RNA ligase family protein;protein_id=WP_037572139.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 392860 394047 . - . ID=gene-RM615_RS02005;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=RM615_RS02005;old_locus_tag=RM615_02005 NZ_JAVRJW010000001.1 Protein Homology CDS 392860 394047 . - 0 ID=cds-WP_037572135.1;Parent=gene-RM615_RS02005;Dbxref=GenBank:WP_037572135.1;Name=WP_037572135.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303474.1;locus_tag=RM615_RS02005;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_037572135.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 394025 395200 . - . ID=gene-RM615_RS02010;Name=RM615_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02010;old_locus_tag=RM615_02010 NZ_JAVRJW010000001.1 Protein Homology CDS 394025 395200 . - 0 ID=cds-WP_311540880.1;Parent=gene-RM615_RS02010;Dbxref=GenBank:WP_311540880.1;Name=WP_311540880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303473.1;locus_tag=RM615_RS02010;product=diglucosyl diacylglycerol synthase;protein_id=WP_311540880.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 395726 397210 . + . ID=gene-RM615_RS02015;Name=RM615_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02015;old_locus_tag=RM615_02015 NZ_JAVRJW010000001.1 Protein Homology CDS 395726 397210 . + 0 ID=cds-WP_037572130.1;Parent=gene-RM615_RS02015;Dbxref=GenBank:WP_037572130.1;Name=WP_037572130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=RM615_RS02015;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_037572130.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 397200 397439 . + . ID=gene-RM615_RS02020;Name=RM615_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02020;old_locus_tag=RM615_02020 NZ_JAVRJW010000001.1 Protein Homology CDS 397200 397439 . + 0 ID=cds-WP_037572127.1;Parent=gene-RM615_RS02020;Dbxref=GenBank:WP_037572127.1;Name=WP_037572127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=RM615_RS02020;product=YueH family protein;protein_id=WP_037572127.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 397452 399014 . + . ID=gene-RM615_RS02025;Name=RM615_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02025;old_locus_tag=RM615_02025 NZ_JAVRJW010000001.1 Protein Homology CDS 397452 399014 . + 0 ID=cds-WP_037572120.1;Parent=gene-RM615_RS02025;Dbxref=GenBank:WP_037572120.1;Name=WP_037572120.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485407.1;locus_tag=RM615_RS02025;product=peptide chain release factor 3;protein_id=WP_037572120.1;transl_table=11 NZ_JAVRJW010000001.1 cmsearch riboswitch 399092 399218 . + . ID=id-NZ_JAVRJW010000001.1:399092..399218;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00080,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000001.1 RefSeq gene 399295 400104 . + . ID=gene-RM615_RS02030;Name=RM615_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02030;old_locus_tag=RM615_02030 NZ_JAVRJW010000001.1 Protein Homology CDS 399295 400104 . + 0 ID=cds-WP_165806227.1;Parent=gene-RM615_RS02030;Dbxref=GenBank:WP_165806227.1;Name=WP_165806227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499510.1;locus_tag=RM615_RS02030;product=MeeY/MeeF family manganese export membrane protein;protein_id=WP_165806227.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 400256 401869 . + . ID=gene-RM615_RS02035;Name=RM615_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02035;old_locus_tag=RM615_02035 NZ_JAVRJW010000001.1 Protein Homology CDS 400256 401869 . + 0 ID=cds-WP_311539217.1;Parent=gene-RM615_RS02035;Dbxref=GenBank:WP_311539217.1;Name=WP_311539217.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=RM615_RS02035;product=S1C family serine protease;protein_id=WP_311539217.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 401886 403244 . + . ID=gene-RM615_RS02040;Name=RM615_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02040;old_locus_tag=RM615_02040 NZ_JAVRJW010000001.1 Protein Homology CDS 401886 403244 . + 0 ID=cds-WP_037572111.1;Parent=gene-RM615_RS02040;Dbxref=GenBank:WP_037572111.1;Name=WP_037572111.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459487.1;locus_tag=RM615_RS02040;product=TrkH family potassium uptake protein;protein_id=WP_037572111.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 403414 404919 . + . ID=gene-RM615_RS02045;Name=RM615_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02045;old_locus_tag=RM615_02045 NZ_JAVRJW010000001.1 Protein Homology CDS 403414 404919 . + 0 ID=cds-WP_311539216.1;Parent=gene-RM615_RS02045;Dbxref=GenBank:WP_311539216.1;Name=WP_311539216.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424683.1;locus_tag=RM615_RS02045;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_311539216.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 405002 405604 . - . ID=gene-RM615_RS02050;Name=RM615_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02050;old_locus_tag=RM615_02050 NZ_JAVRJW010000001.1 Protein Homology CDS 405002 405604 . - 0 ID=cds-WP_103159397.1;Parent=gene-RM615_RS02050;Dbxref=GenBank:WP_103159397.1;Name=WP_103159397.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=RM615_RS02050;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_103159397.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 405611 405796 . - . ID=gene-RM615_RS02055;Name=RM615_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02055;old_locus_tag=RM615_02055 NZ_JAVRJW010000001.1 Protein Homology CDS 405611 405796 . - 0 ID=cds-WP_037572105.1;Parent=gene-RM615_RS02055;Dbxref=GenBank:WP_037572105.1;Name=WP_037572105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=RM615_RS02055;product=YkvS family protein;protein_id=WP_037572105.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 405971 406963 . + . ID=gene-RM615_RS02060;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=RM615_RS02060;old_locus_tag=RM615_02060 NZ_JAVRJW010000001.1 Protein Homology CDS 405971 406963 . + 0 ID=cds-WP_103159398.1;Parent=gene-RM615_RS02060;Dbxref=GenBank:WP_103159398.1;Name=WP_103159398.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=RM615_RS02060;product=lipoate--protein ligase;protein_id=WP_103159398.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 407031 407258 . - . ID=gene-RM615_RS02065;Name=RM615_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02065;old_locus_tag=RM615_02065 NZ_JAVRJW010000001.1 Protein Homology CDS 407031 407258 . - 0 ID=cds-WP_103159399.1;Parent=gene-RM615_RS02065;Dbxref=GenBank:WP_103159399.1;Name=WP_103159399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168467.1;locus_tag=RM615_RS02065;product=IDEAL domain-containing protein;protein_id=WP_103159399.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 407485 408123 . + . ID=gene-RM615_RS02070;Name=RM615_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02070;old_locus_tag=RM615_02070 NZ_JAVRJW010000001.1 Protein Homology CDS 407485 408123 . + 0 ID=cds-WP_051604934.1;Parent=gene-RM615_RS02070;Dbxref=GenBank:WP_051604934.1;Name=WP_051604934.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424690.1;locus_tag=RM615_RS02070;product=competence protein ComK;protein_id=WP_051604934.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 408518 408967 . + . ID=gene-RM615_RS02075;Name=RM615_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02075;old_locus_tag=RM615_02075 NZ_JAVRJW010000001.1 Protein Homology CDS 408518 408967 . + 0 ID=cds-WP_103159400.1;Parent=gene-RM615_RS02075;Dbxref=GenBank:WP_103159400.1;Name=WP_103159400.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276697.1;locus_tag=RM615_RS02075;product=GNAT family N-acetyltransferase;protein_id=WP_103159400.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 409126 409536 . + . ID=gene-RM615_RS02080;Name=RM615_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02080;old_locus_tag=RM615_02080 NZ_JAVRJW010000001.1 Protein Homology CDS 409126 409536 . + 0 ID=cds-WP_037572095.1;Parent=gene-RM615_RS02080;Dbxref=GenBank:WP_037572095.1;Name=WP_037572095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728927.1;locus_tag=RM615_RS02080;product=YolD-like family protein;protein_id=WP_037572095.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 409689 409763 . + . ID=gene-RM615_RS02085;Name=RM615_RS02085;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS02085;old_locus_tag=RM615_02085 NZ_JAVRJW010000001.1 tRNAscan-SE tRNA 409689 409763 . + . ID=rna-RM615_RS02085;Parent=gene-RM615_RS02085;anticodon=(pos:409721..409723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS02085;product=tRNA-Asn NZ_JAVRJW010000001.1 tRNAscan-SE exon 409689 409763 . + . ID=exon-RM615_RS02085-1;Parent=rna-RM615_RS02085;anticodon=(pos:409721..409723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS02085;product=tRNA-Asn NZ_JAVRJW010000001.1 RefSeq gene 409767 409855 . + . ID=gene-RM615_RS02090;Name=RM615_RS02090;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS02090;old_locus_tag=RM615_02090 NZ_JAVRJW010000001.1 tRNAscan-SE tRNA 409767 409855 . + . ID=rna-RM615_RS02090;Parent=gene-RM615_RS02090;anticodon=(pos:409802..409804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS02090;product=tRNA-Ser NZ_JAVRJW010000001.1 tRNAscan-SE exon 409767 409855 . + . ID=exon-RM615_RS02090-1;Parent=rna-RM615_RS02090;anticodon=(pos:409802..409804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS02090;product=tRNA-Ser NZ_JAVRJW010000001.1 RefSeq gene 410294 410851 . + . ID=gene-RM615_RS02095;Name=RM615_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02095;old_locus_tag=RM615_02095 NZ_JAVRJW010000001.1 Protein Homology CDS 410294 410851 . + 0 ID=cds-WP_037571946.1;Parent=gene-RM615_RS02095;Dbxref=GenBank:WP_037571946.1;Name=WP_037571946.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=RM615_RS02095;product=GNAT family N-acetyltransferase;protein_id=WP_037571946.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 410863 411510 . + . ID=gene-RM615_RS02100;Name=RM615_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02100;old_locus_tag=RM615_02100 NZ_JAVRJW010000001.1 Protein Homology CDS 410863 411510 . + 0 ID=cds-WP_105963371.1;Parent=gene-RM615_RS02100;Dbxref=GenBank:WP_105963371.1;Name=WP_105963371.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=RM615_RS02100;product=ABC transporter ATP-binding protein;protein_id=WP_105963371.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 411507 412283 . + . ID=gene-RM615_RS02105;Name=RM615_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02105;old_locus_tag=RM615_02105 NZ_JAVRJW010000001.1 Protein Homology CDS 411507 412283 . + 0 ID=cds-WP_037571940.1;Parent=gene-RM615_RS02105;Dbxref=GenBank:WP_037571940.1;Name=WP_037571940.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444197.1;locus_tag=RM615_RS02105;product=ABC transporter permease;protein_id=WP_037571940.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 412306 413244 . - . ID=gene-RM615_RS02110;Name=RM615_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02110;old_locus_tag=RM615_02110 NZ_JAVRJW010000001.1 Protein Homology CDS 412306 413244 . - 0 ID=cds-WP_037571937.1;Parent=gene-RM615_RS02110;Dbxref=GenBank:WP_037571937.1;Name=WP_037571937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=RM615_RS02110;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_037571937.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 413419 414771 . + . ID=gene-RM615_RS02115;Name=RM615_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02115;old_locus_tag=RM615_02115 NZ_JAVRJW010000001.1 Protein Homology CDS 413419 414771 . + 0 ID=cds-WP_311539211.1;Parent=gene-RM615_RS02115;Dbxref=GenBank:WP_311539211.1;Name=WP_311539211.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=RM615_RS02115;product=isochorismate synthase;protein_id=WP_311539211.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 414773 416446 . + . ID=gene-RM615_RS02120;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=RM615_RS02120;old_locus_tag=RM615_02120 NZ_JAVRJW010000001.1 Protein Homology CDS 414773 416446 . + 0 ID=cds-WP_311539210.1;Parent=gene-RM615_RS02120;Dbxref=GenBank:WP_311539210.1;Name=WP_311539210.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833068.1;locus_tag=RM615_RS02120;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_311539210.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 416433 417248 . + . ID=gene-RM615_RS02125;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=RM615_RS02125;old_locus_tag=RM615_02125 NZ_JAVRJW010000001.1 Protein Homology CDS 416433 417248 . + 0 ID=cds-WP_037571929.1;Parent=gene-RM615_RS02125;Dbxref=GenBank:WP_037571929.1;Name=WP_037571929.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471899.1;locus_tag=RM615_RS02125;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_037571929.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 417241 418059 . + . ID=gene-RM615_RS02130;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=RM615_RS02130;old_locus_tag=RM615_02130 NZ_JAVRJW010000001.1 Protein Homology CDS 417241 418059 . + 0 ID=cds-WP_037571924.1;Parent=gene-RM615_RS02130;Dbxref=GenBank:WP_037571924.1;Name=WP_037571924.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=RM615_RS02130;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_037571924.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 418152 419318 . - . ID=gene-RM615_RS02135;Name=RM615_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02135;old_locus_tag=RM615_02135 NZ_JAVRJW010000001.1 Protein Homology CDS 418152 419318 . - 0 ID=cds-WP_311540881.1;Parent=gene-RM615_RS02135;Dbxref=GenBank:WP_311540881.1;Name=WP_311540881.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508052.1;locus_tag=RM615_RS02135;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311540881.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 419390 420397 . - . ID=gene-RM615_RS02140;Name=RM615_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02140;old_locus_tag=RM615_02140 NZ_JAVRJW010000001.1 Protein Homology CDS 419390 420397 . - 0 ID=cds-WP_037571918.1;Parent=gene-RM615_RS02140;Dbxref=GenBank:WP_037571918.1;Name=WP_037571918.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=RM615_RS02140;product=acyltransferase family protein;protein_id=WP_037571918.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 420810 424904 . - . ID=gene-RM615_RS02145;Name=RM615_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02145;old_locus_tag=RM615_02145 NZ_JAVRJW010000001.1 Protein Homology CDS 420810 424904 . - 0 ID=cds-WP_311540882.1;Parent=gene-RM615_RS02145;Dbxref=GenBank:WP_311540882.1;Name=WP_311540882.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614312.1;locus_tag=RM615_RS02145;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_311540882.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 425107 425529 . - . ID=gene-RM615_RS02150;Name=RM615_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02150;old_locus_tag=RM615_02150 NZ_JAVRJW010000001.1 Protein Homology CDS 425107 425529 . - 0 ID=cds-WP_037571912.1;Parent=gene-RM615_RS02150;Dbxref=GenBank:WP_037571912.1;Name=WP_037571912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018673135.1;locus_tag=RM615_RS02150;product=GNAT family N-acetyltransferase;protein_id=WP_037571912.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 425662 426132 . - . ID=gene-RM615_RS02155;Name=RM615_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02155;old_locus_tag=RM615_02155 NZ_JAVRJW010000001.1 Protein Homology CDS 425662 426132 . - 0 ID=cds-WP_037571909.1;Parent=gene-RM615_RS02155;Dbxref=GenBank:WP_037571909.1;Name=WP_037571909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471869.1;locus_tag=RM615_RS02155;product=DUF2538 family protein;protein_id=WP_037571909.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 426149 427396 . - . ID=gene-RM615_RS02160;Name=RM615_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02160;old_locus_tag=RM615_02160 NZ_JAVRJW010000001.1 Protein Homology CDS 426149 427396 . - 0 ID=cds-WP_311540883.1;Parent=gene-RM615_RS02160;Dbxref=GenBank:WP_311540883.1;Name=WP_311540883.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478388.1;locus_tag=RM615_RS02160;product=LCP family protein;protein_id=WP_311540883.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 427748 429400 . + . ID=gene-RM615_RS02165;Name=RM615_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02165;old_locus_tag=RM615_02165 NZ_JAVRJW010000001.1 Protein Homology CDS 427748 429400 . + 0 ID=cds-WP_311540884.1;Parent=gene-RM615_RS02165;Dbxref=GenBank:WP_311540884.1;Name=WP_311540884.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728935.1;locus_tag=RM615_RS02165;product=phospho-sugar mutase;protein_id=WP_311540884.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 429478 430626 . - . ID=gene-RM615_RS02170;Name=RM615_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02170;old_locus_tag=RM615_02170 NZ_JAVRJW010000001.1 Protein Homology CDS 429478 430626 . - 0 ID=cds-WP_037573020.1;Parent=gene-RM615_RS02170;Dbxref=GenBank:WP_037573020.1;Name=WP_037573020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167474.1;locus_tag=RM615_RS02170;product=SH3 domain-containing protein;protein_id=WP_037573020.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 431003 431188 . + . ID=gene-RM615_RS02175;Name=RM615_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02175;old_locus_tag=RM615_02175 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 431003 431188 . + 0 ID=cds-WP_311540885.1;Parent=gene-RM615_RS02175;Dbxref=GenBank:WP_311540885.1;Name=WP_311540885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS02175;product=hypothetical protein;protein_id=WP_311540885.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 431245 432621 . + . ID=gene-RM615_RS02180;Name=RM615_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02180;old_locus_tag=RM615_02180 NZ_JAVRJW010000001.1 Protein Homology CDS 431245 432621 . + 0 ID=cds-WP_311540886.1;Parent=gene-RM615_RS02180;Dbxref=GenBank:WP_311540886.1;Name=WP_311540886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167474.1;locus_tag=RM615_RS02180;product=SH3 domain-containing protein;protein_id=WP_311540886.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 432962 434224 . + . ID=gene-RM615_RS02185;Name=RM615_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02185;old_locus_tag=RM615_02185 NZ_JAVRJW010000001.1 Protein Homology CDS 432962 434224 . + 0 ID=cds-WP_311540887.1;Parent=gene-RM615_RS02185;Dbxref=GenBank:WP_311540887.1;Name=WP_311540887.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498728.1;locus_tag=RM615_RS02185;product=nucleotide sugar dehydrogenase;protein_id=WP_311540887.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 434345 435271 . + . ID=gene-RM615_RS02190;Name=RM615_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02190;old_locus_tag=RM615_02190 NZ_JAVRJW010000001.1 Protein Homology CDS 434345 435271 . + 0 ID=cds-WP_262620724.1;Parent=gene-RM615_RS02190;Dbxref=GenBank:WP_262620724.1;Name=WP_262620724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728937.1;locus_tag=RM615_RS02190;product=hypothetical protein;protein_id=WP_262620724.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 435273 437834 . + . ID=gene-RM615_RS02195;Name=RM615_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02195;old_locus_tag=RM615_02195 NZ_JAVRJW010000001.1 Protein Homology CDS 435273 437834 . + 0 ID=cds-WP_103159699.1;Parent=gene-RM615_RS02195;Dbxref=GenBank:WP_103159699.1;Name=WP_103159699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=RM615_RS02195;product=glycosyltransferase;protein_id=WP_103159699.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 437849 439714 . + . ID=gene-RM615_RS02200;Name=RM615_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02200;old_locus_tag=RM615_02200 NZ_JAVRJW010000001.1 Protein Homology CDS 437849 439714 . + 0 ID=cds-WP_037571893.1;Parent=gene-RM615_RS02200;Dbxref=GenBank:WP_037571893.1;Name=WP_037571893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=RM615_RS02200;product=hypothetical protein;protein_id=WP_037571893.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 439711 440520 . + . ID=gene-RM615_RS02205;Name=RM615_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02205;old_locus_tag=RM615_02205 NZ_JAVRJW010000001.1 Protein Homology CDS 439711 440520 . + 0 ID=cds-WP_037571891.1;Parent=gene-RM615_RS02205;Dbxref=GenBank:WP_037571891.1;Name=WP_037571891.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=RM615_RS02205;product=ABC transporter permease;protein_id=WP_037571891.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 440542 441732 . + . ID=gene-RM615_RS02210;Name=RM615_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02210;old_locus_tag=RM615_02210 NZ_JAVRJW010000001.1 Protein Homology CDS 440542 441732 . + 0 ID=cds-WP_107370418.1;Parent=gene-RM615_RS02210;Dbxref=GenBank:WP_107370418.1;Name=WP_107370418.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=RM615_RS02210;product=glycosyltransferase family 4 protein;protein_id=WP_107370418.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 441738 442655 . + . ID=gene-RM615_RS02215;Name=RM615_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02215;old_locus_tag=RM615_02215 NZ_JAVRJW010000001.1 Protein Homology CDS 441738 442655 . + 0 ID=cds-WP_037571885.1;Parent=gene-RM615_RS02215;Dbxref=GenBank:WP_037571885.1;Name=WP_037571885.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167467.1;locus_tag=RM615_RS02215;product=ABC transporter ATP-binding protein;protein_id=WP_037571885.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 442675 443493 . + . ID=gene-RM615_RS02220;Name=RM615_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02220;old_locus_tag=RM615_02220 NZ_JAVRJW010000001.1 Protein Homology CDS 442675 443493 . + 0 ID=cds-WP_037571882.1;Parent=gene-RM615_RS02220;Dbxref=GenBank:WP_037571882.1;Name=WP_037571882.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=RM615_RS02220;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_037571882.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 443511 444854 . + . ID=gene-RM615_RS02225;Name=RM615_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02225;old_locus_tag=RM615_02225 NZ_JAVRJW010000001.1 Protein Homology CDS 443511 444854 . + 0 ID=cds-WP_107366532.1;Parent=gene-RM615_RS02225;Dbxref=GenBank:WP_107366532.1;Name=WP_107366532.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=RM615_RS02225;product=glycosyltransferase;protein_id=WP_107366532.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 445169 445459 . - . ID=gene-RM615_RS02230;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=RM615_RS02230;old_locus_tag=RM615_02230 NZ_JAVRJW010000001.1 Protein Homology CDS 445169 445459 . - 0 ID=cds-WP_037571876.1;Parent=gene-RM615_RS02230;Dbxref=GenBank:WP_037571876.1;Name=WP_037571876.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=RM615_RS02230;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_037571876.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 445456 446061 . - . ID=gene-RM615_RS02235;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=RM615_RS02235;old_locus_tag=RM615_02235 NZ_JAVRJW010000001.1 Protein Homology CDS 445456 446061 . - 0 ID=cds-WP_037571873.1;Parent=gene-RM615_RS02235;Dbxref=GenBank:WP_037571873.1;Name=WP_037571873.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=RM615_RS02235;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_037571873.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 446051 448039 . - . ID=gene-RM615_RS02240;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=RM615_RS02240;old_locus_tag=RM615_02240 NZ_JAVRJW010000001.1 Protein Homology CDS 446051 448039 . - 0 ID=cds-WP_105963413.1;Parent=gene-RM615_RS02240;Dbxref=GenBank:WP_105963413.1;Name=WP_105963413.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=RM615_RS02240;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_105963413.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 448042 449133 . - . ID=gene-RM615_RS02245;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=RM615_RS02245;old_locus_tag=RM615_02245 NZ_JAVRJW010000001.1 Protein Homology CDS 448042 449133 . - 0 ID=cds-WP_037571870.1;Parent=gene-RM615_RS02245;Dbxref=GenBank:WP_037571870.1;Name=WP_037571870.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467596.1;locus_tag=RM615_RS02245;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_037571870.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 449605 449943 . - . ID=gene-RM615_RS02250;Name=RM615_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02250;old_locus_tag=RM615_02250 NZ_JAVRJW010000001.1 Protein Homology CDS 449605 449943 . - 0 ID=cds-WP_105963380.1;Parent=gene-RM615_RS02250;Dbxref=GenBank:WP_105963380.1;Name=WP_105963380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=RM615_RS02250;product=immunoglobulin-like domain-containing protein;protein_id=WP_105963380.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 450150 451295 . + . ID=gene-RM615_RS02255;Name=RM615_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02255;old_locus_tag=RM615_02255 NZ_JAVRJW010000001.1 Protein Homology CDS 450150 451295 . + 0 ID=cds-WP_037571864.1;Parent=gene-RM615_RS02255;Dbxref=GenBank:WP_037571864.1;Name=WP_037571864.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=RM615_RS02255;product=globin domain-containing protein;protein_id=WP_037571864.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 451452 452309 . - . ID=gene-RM615_RS02260;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=RM615_RS02260;old_locus_tag=RM615_02260 NZ_JAVRJW010000001.1 Protein Homology CDS 451452 452309 . - 0 ID=cds-WP_037571861.1;Parent=gene-RM615_RS02260;Dbxref=GenBank:WP_037571861.1;Name=WP_037571861.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=RM615_RS02260;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_037571861.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 452521 453003 . + . ID=gene-RM615_RS02265;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=RM615_RS02265;old_locus_tag=RM615_02265 NZ_JAVRJW010000001.1 Protein Homology CDS 452521 453003 . + 0 ID=cds-WP_037573011.1;Parent=gene-RM615_RS02265;Dbxref=GenBank:WP_037573011.1;Name=WP_037573011.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=RM615_RS02265;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_037573011.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 452990 454117 . + . ID=gene-RM615_RS02270;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=RM615_RS02270;old_locus_tag=RM615_02270 NZ_JAVRJW010000001.1 Protein Homology CDS 452990 454117 . + 0 ID=cds-WP_105963381.1;Parent=gene-RM615_RS02270;Dbxref=GenBank:WP_105963381.1;Name=WP_105963381.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637035.1;locus_tag=RM615_RS02270;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_105963381.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 454114 454821 . + . ID=gene-RM615_RS02275;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=RM615_RS02275;old_locus_tag=RM615_02275 NZ_JAVRJW010000001.1 Protein Homology CDS 454114 454821 . + 0 ID=cds-WP_107366534.1;Parent=gene-RM615_RS02275;Dbxref=GenBank:WP_107366534.1;Name=WP_107366534.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167838.1;locus_tag=RM615_RS02275;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_107366534.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 454823 455092 . + . ID=gene-RM615_RS02280;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=RM615_RS02280;old_locus_tag=RM615_02280 NZ_JAVRJW010000001.1 Protein Homology CDS 454823 455092 . + 0 ID=cds-WP_037571855.1;Parent=gene-RM615_RS02280;Dbxref=GenBank:WP_037571855.1;Name=WP_037571855.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=RM615_RS02280;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_037571855.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 455092 455763 . + . ID=gene-RM615_RS02285;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=RM615_RS02285;old_locus_tag=RM615_02285 NZ_JAVRJW010000001.1 Protein Homology CDS 455092 455763 . + 0 ID=cds-WP_037571853.1;Parent=gene-RM615_RS02285;Dbxref=GenBank:WP_037571853.1;Name=WP_037571853.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=RM615_RS02285;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_037571853.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 455756 457945 . + . ID=gene-RM615_RS02290;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=RM615_RS02290;old_locus_tag=RM615_02290 NZ_JAVRJW010000001.1 Protein Homology CDS 455756 457945 . + 0 ID=cds-WP_107367062.1;Parent=gene-RM615_RS02290;Dbxref=GenBank:WP_107367062.1;Name=WP_107367062.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=RM615_RS02290;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_107367062.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 457924 459345 . + . ID=gene-RM615_RS02295;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=RM615_RS02295;old_locus_tag=RM615_02295 NZ_JAVRJW010000001.1 Protein Homology CDS 457924 459345 . + 0 ID=cds-WP_037571849.1;Parent=gene-RM615_RS02295;Dbxref=GenBank:WP_037571849.1;Name=WP_037571849.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=RM615_RS02295;product=amidophosphoribosyltransferase;protein_id=WP_037571849.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 459350 460378 . + . ID=gene-RM615_RS02300;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=RM615_RS02300;old_locus_tag=RM615_02300 NZ_JAVRJW010000001.1 Protein Homology CDS 459350 460378 . + 0 ID=cds-WP_037571839.1;Parent=gene-RM615_RS02300;Dbxref=GenBank:WP_037571839.1;Name=WP_037571839.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175767.1;locus_tag=RM615_RS02300;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_037571839.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 460381 460947 . + . ID=gene-RM615_RS02305;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=RM615_RS02305;old_locus_tag=RM615_02305 NZ_JAVRJW010000001.1 Protein Homology CDS 460381 460947 . + 0 ID=cds-WP_037571836.1;Parent=gene-RM615_RS02305;Dbxref=GenBank:WP_037571836.1;Name=WP_037571836.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=RM615_RS02305;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_037571836.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 460960 462438 . + . ID=gene-RM615_RS02310;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=RM615_RS02310;old_locus_tag=RM615_02310 NZ_JAVRJW010000001.1 Protein Homology CDS 460960 462438 . + 0 ID=cds-WP_105963386.1;Parent=gene-RM615_RS02310;Dbxref=GenBank:WP_105963386.1;Name=WP_105963386.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462693.1;locus_tag=RM615_RS02310;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_105963386.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 462453 463694 . + . ID=gene-RM615_RS02315;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=RM615_RS02315;old_locus_tag=RM615_02315 NZ_JAVRJW010000001.1 Protein Homology CDS 462453 463694 . + 0 ID=cds-WP_311540888.1;Parent=gene-RM615_RS02315;Dbxref=GenBank:WP_311540888.1;Name=WP_311540888.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448142.1;locus_tag=RM615_RS02315;product=phosphoribosylamine--glycine ligase;protein_id=WP_311540888.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 464512 465303 . - . ID=gene-RM615_RS02320;Name=RM615_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02320;old_locus_tag=RM615_02320 NZ_JAVRJW010000001.1 Protein Homology CDS 464512 465303 . - 0 ID=cds-WP_311540889.1;Parent=gene-RM615_RS02320;Dbxref=GenBank:WP_311540889.1;Name=WP_311540889.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=RM615_RS02320;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_311540889.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 465300 466697 . - . ID=gene-RM615_RS02325;Name=RM615_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02325;old_locus_tag=RM615_02325 NZ_JAVRJW010000001.1 Protein Homology CDS 465300 466697 . - 0 ID=cds-WP_103159444.1;Parent=gene-RM615_RS02325;Dbxref=GenBank:WP_103159444.1;Name=WP_103159444.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=RM615_RS02325;product=ABC transporter ATP-binding protein;protein_id=WP_103159444.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 466710 467291 . - . ID=gene-RM615_RS02330;Name=RM615_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02330;old_locus_tag=RM615_02330 NZ_JAVRJW010000001.1 Protein Homology CDS 466710 467291 . - 0 ID=cds-WP_105963389.1;Parent=gene-RM615_RS02330;Dbxref=GenBank:WP_105963389.1;Name=WP_105963389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168261.1;locus_tag=RM615_RS02330;product=ECF transporter S component;protein_id=WP_105963389.1;transl_table=11 NZ_JAVRJW010000001.1 cmsearch riboswitch 467407 467507 . - . ID=id-NZ_JAVRJW010000001.1:467407..467507;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000001.1 RefSeq gene 467702 467833 . - . ID=gene-RM615_RS02335;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=RM615_RS02335;old_locus_tag=RM615_02335 NZ_JAVRJW010000001.1 Protein Homology CDS 467702 467833 . - 0 ID=cds-WP_311540890.1;Parent=gene-RM615_RS02335;Dbxref=GenBank:WP_311540890.1;Name=WP_311540890.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=RM615_RS02335;product=glycopeptide resistance-associated protein GraF;protein_id=WP_311540890.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 468159 469502 . + . ID=gene-RM615_RS02340;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=RM615_RS02340;old_locus_tag=RM615_02340 NZ_JAVRJW010000001.1 Protein Homology CDS 468159 469502 . + 0 ID=cds-WP_311540891.1;Parent=gene-RM615_RS02340;Dbxref=GenBank:WP_311540891.1;Name=WP_311540891.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424746.1;locus_tag=RM615_RS02340;product=lipoteichoic acid stability factor AuxA;protein_id=WP_311540891.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 469628 470812 . + . ID=gene-RM615_RS02345;Name=RM615_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02345;old_locus_tag=RM615_02345 NZ_JAVRJW010000001.1 Protein Homology CDS 469628 470812 . + 0 ID=cds-WP_103159443.1;Parent=gene-RM615_RS02345;Dbxref=GenBank:WP_103159443.1;Name=WP_103159443.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899956.1;locus_tag=RM615_RS02345;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_103159443.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 470856 471386 . + . ID=gene-RM615_RS02350;Name=RM615_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02350;old_locus_tag=RM615_02350 NZ_JAVRJW010000001.1 Protein Homology CDS 470856 471386 . + 0 ID=cds-WP_037571815.1;Parent=gene-RM615_RS02350;Dbxref=GenBank:WP_037571815.1;Name=WP_037571815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=RM615_RS02350;product=hypothetical protein;protein_id=WP_037571815.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 471544 471810 . + . ID=gene-RM615_RS02355;Name=RM615_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02355;old_locus_tag=RM615_02355 NZ_JAVRJW010000001.1 Protein Homology CDS 471544 471810 . + 0 ID=cds-WP_037566021.1;Parent=gene-RM615_RS02355;Dbxref=GenBank:WP_037566021.1;Name=WP_037566021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=RM615_RS02355;product=phosphocarrier protein HPr;protein_id=WP_037566021.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 471810 473531 . + . ID=gene-RM615_RS02360;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=RM615_RS02360;old_locus_tag=RM615_02360 NZ_JAVRJW010000001.1 Protein Homology CDS 471810 473531 . + 0 ID=cds-WP_136732034.1;Parent=gene-RM615_RS02360;Dbxref=GenBank:WP_136732034.1;Name=WP_136732034.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=RM615_RS02360;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_136732034.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 473655 473882 . - . ID=gene-RM615_RS02365;Name=RM615_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02365;old_locus_tag=RM615_02365 NZ_JAVRJW010000001.1 Protein Homology CDS 473655 473882 . - 0 ID=cds-WP_037571811.1;Parent=gene-RM615_RS02365;Dbxref=GenBank:WP_037571811.1;Name=WP_037571811.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289617.1;locus_tag=RM615_RS02365;product=glutaredoxin family protein;protein_id=WP_037571811.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 474105 475457 . + . ID=gene-RM615_RS02370;Name=RM615_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02370;old_locus_tag=RM615_02370 NZ_JAVRJW010000001.1 Protein Homology CDS 474105 475457 . + 0 ID=cds-WP_105963390.1;Parent=gene-RM615_RS02370;Dbxref=GenBank:WP_105963390.1;Name=WP_105963390.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424752.1;locus_tag=RM615_RS02370;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_105963390.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 475454 476473 . + . ID=gene-RM615_RS02375;Name=RM615_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02375;old_locus_tag=RM615_02375 NZ_JAVRJW010000001.1 Protein Homology CDS 475454 476473 . + 0 ID=cds-WP_037571804.1;Parent=gene-RM615_RS02375;Dbxref=GenBank:WP_037571804.1;Name=WP_037571804.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=RM615_RS02375;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_037571804.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 476646 477305 . + . ID=gene-RM615_RS02380;Name=RM615_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02380;old_locus_tag=RM615_02380 NZ_JAVRJW010000001.1 Protein Homology CDS 476646 477305 . + 0 ID=cds-WP_037571801.1;Parent=gene-RM615_RS02380;Dbxref=GenBank:WP_037571801.1;Name=WP_037571801.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=RM615_RS02380;product=potassium channel family protein;protein_id=WP_037571801.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 477403 479085 . - . ID=gene-RM615_RS02385;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=RM615_RS02385;old_locus_tag=RM615_02385 NZ_JAVRJW010000001.1 Protein Homology CDS 477403 479085 . - 0 ID=cds-WP_037571798.1;Parent=gene-RM615_RS02385;Dbxref=GenBank:WP_037571798.1;Name=WP_037571798.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614255.1;locus_tag=RM615_RS02385;product=ribonuclease J1;protein_id=WP_037571798.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 479085 479300 . - . ID=gene-RM615_RS02390;Name=RM615_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02390;old_locus_tag=RM615_02390 NZ_JAVRJW010000001.1 Protein Homology CDS 479085 479300 . - 0 ID=cds-WP_037571792.1;Parent=gene-RM615_RS02390;Dbxref=GenBank:WP_037571792.1;Name=WP_037571792.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=RM615_RS02390;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_037571792.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 479620 479889 . + . ID=gene-RM615_RS02395;Name=RM615_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02395;old_locus_tag=RM615_02395 NZ_JAVRJW010000001.1 Protein Homology CDS 479620 479889 . + 0 ID=cds-WP_037571790.1;Parent=gene-RM615_RS02395;Dbxref=GenBank:WP_037571790.1;Name=WP_037571790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=RM615_RS02395;product=hypothetical protein;protein_id=WP_037571790.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 479951 480502 . - . ID=gene-RM615_RS02400;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM615_RS02400;old_locus_tag=RM615_02400 NZ_JAVRJW010000001.1 Protein Homology CDS 479951 480502 . - 0 ID=cds-WP_037571788.1;Parent=gene-RM615_RS02400;Dbxref=GenBank:WP_037571788.1;Name=WP_037571788.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=RM615_RS02400;product=peptide deformylase;protein_id=WP_037571788.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 480627 481256 . + . ID=gene-RM615_RS02405;Name=RM615_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02405;old_locus_tag=RM615_02405 NZ_JAVRJW010000001.1 Protein Homology CDS 480627 481256 . + 0 ID=cds-WP_311540892.1;Parent=gene-RM615_RS02405;Dbxref=GenBank:WP_311540892.1;Name=WP_311540892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=RM615_RS02405;product=YkyA family protein;protein_id=WP_311540892.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 481417 482529 . + . ID=gene-RM615_RS02410;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=RM615_RS02410;old_locus_tag=RM615_02410 NZ_JAVRJW010000001.1 Protein Homology CDS 481417 482529 . + 0 ID=cds-WP_037571778.1;Parent=gene-RM615_RS02410;Dbxref=GenBank:WP_037571778.1;Name=WP_037571778.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=RM615_RS02410;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_037571778.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 482533 483510 . + . ID=gene-RM615_RS02415;Name=RM615_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02415;old_locus_tag=RM615_02415 NZ_JAVRJW010000001.1 Protein Homology CDS 482533 483510 . + 0 ID=cds-WP_105963392.1;Parent=gene-RM615_RS02415;Dbxref=GenBank:WP_105963392.1;Name=WP_105963392.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=RM615_RS02415;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_105963392.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 483693 484982 . + . ID=gene-RM615_RS02420;Name=RM615_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02420;old_locus_tag=RM615_02420 NZ_JAVRJW010000001.1 Protein Homology CDS 483693 484982 . + 0 ID=cds-WP_311540893.1;Parent=gene-RM615_RS02420;Dbxref=GenBank:WP_311540893.1;Name=WP_311540893.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=RM615_RS02420;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_311540893.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 484986 486392 . + . ID=gene-RM615_RS02425;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM615_RS02425;old_locus_tag=RM615_02425 NZ_JAVRJW010000001.1 Protein Homology CDS 484986 486392 . + 0 ID=cds-WP_105963393.1;Parent=gene-RM615_RS02425;Dbxref=GenBank:WP_105963393.1;Name=WP_105963393.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=RM615_RS02425;product=dihydrolipoyl dehydrogenase;protein_id=WP_105963393.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 486486 486758 . + . ID=gene-RM615_RS02430;Name=RM615_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02430;old_locus_tag=RM615_02430 NZ_JAVRJW010000001.1 Protein Homology CDS 486486 486758 . + 0 ID=cds-WP_037571766.1;Parent=gene-RM615_RS02430;Dbxref=GenBank:WP_037571766.1;Name=WP_037571766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=RM615_RS02430;product=UPF0223 family protein;protein_id=WP_037571766.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 486861 487400 . + . ID=gene-RM615_RS02435;Name=RM615_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02435;old_locus_tag=RM615_02435 NZ_JAVRJW010000001.1 Protein Homology CDS 486861 487400 . + 0 ID=cds-WP_037571758.1;Parent=gene-RM615_RS02435;Dbxref=GenBank:WP_037571758.1;Name=WP_037571758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=RM615_RS02435;product=helix-turn-helix domain-containing protein;protein_id=WP_037571758.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 487412 488512 . + . ID=gene-RM615_RS02440;Name=RM615_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02440;old_locus_tag=RM615_02440 NZ_JAVRJW010000001.1 Protein Homology CDS 487412 488512 . + 0 ID=cds-WP_105963394.1;Parent=gene-RM615_RS02440;Dbxref=GenBank:WP_105963394.1;Name=WP_105963394.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=RM615_RS02440;product=ABC transporter ATP-binding protein;protein_id=WP_105963394.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 488499 489305 . + . ID=gene-RM615_RS02445;Name=RM615_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02445;old_locus_tag=RM615_02445 NZ_JAVRJW010000001.1 Protein Homology CDS 488499 489305 . + 0 ID=cds-WP_311539531.1;Parent=gene-RM615_RS02445;Dbxref=GenBank:WP_311539531.1;Name=WP_311539531.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=RM615_RS02445;product=ABC transporter permease;protein_id=WP_311539531.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 489302 490114 . + . ID=gene-RM615_RS02450;Name=RM615_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02450;old_locus_tag=RM615_02450 NZ_JAVRJW010000001.1 Protein Homology CDS 489302 490114 . + 0 ID=cds-WP_105996771.1;Parent=gene-RM615_RS02450;Dbxref=GenBank:WP_105996771.1;Name=WP_105996771.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=RM615_RS02450;product=ABC transporter permease;protein_id=WP_105996771.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 490111 491181 . + . ID=gene-RM615_RS02455;Name=RM615_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02455;old_locus_tag=RM615_02455 NZ_JAVRJW010000001.1 Protein Homology CDS 490111 491181 . + 0 ID=cds-WP_107363593.1;Parent=gene-RM615_RS02455;Dbxref=GenBank:WP_107363593.1;Name=WP_107363593.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=RM615_RS02455;product=ABC transporter substrate-binding protein;protein_id=WP_107363593.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 491246 492313 . + . ID=gene-RM615_RS02460;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=RM615_RS02460;old_locus_tag=RM615_02460 NZ_JAVRJW010000001.1 Protein Homology CDS 491246 492313 . + 0 ID=cds-WP_107372090.1;Parent=gene-RM615_RS02460;Dbxref=GenBank:WP_107372090.1;Name=WP_107372090.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614239.1;locus_tag=RM615_RS02460;product=lipoteichoic acid stability factor AuxB;protein_id=WP_107372090.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 492555 493361 . + . ID=gene-RM615_RS02465;Name=RM615_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02465;old_locus_tag=RM615_02465 NZ_JAVRJW010000001.1 Protein Homology CDS 492555 493361 . + 0 ID=cds-WP_311539530.1;Parent=gene-RM615_RS02465;Dbxref=GenBank:WP_311539530.1;Name=WP_311539530.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024670.7;locus_tag=RM615_RS02465;product=DUF4064 domain-containing protein;protein_id=WP_311539530.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 493650 494261 . - . ID=gene-RM615_RS02470;Name=RM615_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02470;old_locus_tag=RM615_02470 NZ_JAVRJW010000001.1 Protein Homology CDS 493650 494261 . - 0 ID=cds-WP_037571745.1;Parent=gene-RM615_RS02470;Dbxref=GenBank:WP_037571745.1;Name=WP_037571745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=RM615_RS02470;product=YktB family protein;protein_id=WP_037571745.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 494377 495189 . + . ID=gene-RM615_RS02475;Name=RM615_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02475;old_locus_tag=RM615_02475 NZ_JAVRJW010000001.1 Protein Homology CDS 494377 495189 . + 0 ID=cds-WP_037571744.1;Parent=gene-RM615_RS02475;Dbxref=GenBank:WP_037571744.1;Name=WP_037571744.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480537.1;locus_tag=RM615_RS02475;product=inositol monophosphatase family protein;protein_id=WP_037571744.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 495381 495572 . - . ID=gene-RM615_RS02480;Name=RM615_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02480;old_locus_tag=RM615_02480 NZ_JAVRJW010000001.1 Protein Homology CDS 495381 495572 . - 0 ID=cds-WP_229717287.1;Parent=gene-RM615_RS02480;Dbxref=GenBank:WP_229717287.1;Name=WP_229717287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810616.1;locus_tag=RM615_RS02480;product=DUF5325 family protein;protein_id=WP_229717287.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 495664 497511 . + . ID=gene-RM615_RS02485;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=RM615_RS02485;old_locus_tag=RM615_02485 NZ_JAVRJW010000001.1 Protein Homology CDS 495664 497511 . + 0 ID=cds-WP_037571740.1;Parent=gene-RM615_RS02485;Dbxref=GenBank:WP_037571740.1;Name=WP_037571740.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499605.1;locus_tag=RM615_RS02485;product=translational GTPase TypA;protein_id=WP_037571740.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 497719 498843 . + . ID=gene-RM615_RS02490;Name=RM615_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02490;old_locus_tag=RM615_02490 NZ_JAVRJW010000001.1 Protein Homology CDS 497719 498843 . + 0 ID=cds-WP_037571737.1;Parent=gene-RM615_RS02490;Dbxref=GenBank:WP_037571737.1;Name=WP_037571737.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439060.1;locus_tag=RM615_RS02490;product=NADH-dependent flavin oxidoreductase;protein_id=WP_037571737.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 499102 499287 . - . ID=gene-RM615_RS02495;Name=RM615_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02495;old_locus_tag=RM615_02495 NZ_JAVRJW010000001.1 Protein Homology CDS 499102 499287 . - 0 ID=cds-WP_037571734.1;Parent=gene-RM615_RS02495;Dbxref=GenBank:WP_037571734.1;Name=WP_037571734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462703.1;locus_tag=RM615_RS02495;product=DUF2197 domain-containing protein;protein_id=WP_037571734.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 499288 499770 . - . ID=gene-RM615_RS02500;Name=RM615_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02500;old_locus_tag=RM615_02500 NZ_JAVRJW010000001.1 Protein Homology CDS 499288 499770 . - 0 ID=cds-WP_037571730.1;Parent=gene-RM615_RS02500;Dbxref=GenBank:WP_037571730.1;Name=WP_037571730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499607.1;locus_tag=RM615_RS02500;product=hypothetical protein;protein_id=WP_037571730.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 499906 500181 . + . ID=gene-RM615_RS02505;Name=RM615_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02505;old_locus_tag=RM615_02505 NZ_JAVRJW010000001.1 Protein Homology CDS 499906 500181 . + 0 ID=cds-WP_037571726.1;Parent=gene-RM615_RS02505;Dbxref=GenBank:WP_037571726.1;Name=WP_037571726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830079.1;locus_tag=RM615_RS02505;product=Fpa/YlaN family protein;protein_id=WP_037571726.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 500258 501478 . + . ID=gene-RM615_RS02510;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=RM615_RS02510;old_locus_tag=RM615_02510 NZ_JAVRJW010000001.1 Protein Homology CDS 500258 501478 . + 0 ID=cds-WP_037571723.1;Parent=gene-RM615_RS02510;Dbxref=GenBank:WP_037571723.1;Name=WP_037571723.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424780.1;locus_tag=RM615_RS02510;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_037571723.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 501744 505193 . + . ID=gene-RM615_RS02515;Name=RM615_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02515;old_locus_tag=RM615_02515 NZ_JAVRJW010000001.1 Protein Homology CDS 501744 505193 . + 0 ID=cds-WP_037571721.1;Parent=gene-RM615_RS02515;Dbxref=GenBank:WP_037571721.1;Name=WP_037571721.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499610.1;locus_tag=RM615_RS02515;product=pyruvate carboxylase;protein_id=WP_037571721.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 505248 506156 . - . ID=gene-RM615_RS02520;Name=RM615_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02520;old_locus_tag=RM615_02520 NZ_JAVRJW010000001.1 Protein Homology CDS 505248 506156 . - 0 ID=cds-WP_037571718.1;Parent=gene-RM615_RS02520;Dbxref=GenBank:WP_037571718.1;Name=WP_037571718.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830131.1;locus_tag=RM615_RS02520;product=COX15/CtaA family protein;protein_id=WP_037571718.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 506370 507281 . + . ID=gene-RM615_RS02525;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=RM615_RS02525;old_locus_tag=RM615_02525 NZ_JAVRJW010000001.1 Protein Homology CDS 506370 507281 . + 0 ID=cds-WP_037571715.1;Parent=gene-RM615_RS02525;Dbxref=GenBank:WP_037571715.1;Name=WP_037571715.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168165.1;locus_tag=RM615_RS02525;product=heme o synthase;protein_id=WP_037571715.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 507306 507767 . + . ID=gene-RM615_RS02530;Name=RM615_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02530;old_locus_tag=RM615_02530 NZ_JAVRJW010000001.1 Protein Homology CDS 507306 507767 . + 0 ID=cds-WP_037571713.1;Parent=gene-RM615_RS02530;Dbxref=GenBank:WP_037571713.1;Name=WP_037571713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=RM615_RS02530;product=DUF420 domain-containing protein;protein_id=WP_037571713.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 507893 508966 . + . ID=gene-RM615_RS02535;Name=RM615_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02535;old_locus_tag=RM615_02535 NZ_JAVRJW010000001.1 Protein Homology CDS 507893 508966 . + 0 ID=cds-WP_037571710.1;Parent=gene-RM615_RS02535;Dbxref=GenBank:WP_037571710.1;Name=WP_037571710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168162.1;locus_tag=RM615_RS02535;product=CAP-associated domain-containing protein;protein_id=WP_037571710.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 508959 509396 . + . ID=gene-RM615_RS02540;Name=RM615_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02540;old_locus_tag=RM615_02540 NZ_JAVRJW010000001.1 Protein Homology CDS 508959 509396 . + 0 ID=cds-WP_037571699.1;Parent=gene-RM615_RS02540;Dbxref=GenBank:WP_037571699.1;Name=WP_037571699.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462472.1;locus_tag=RM615_RS02540;product=YlbF/YmcA family competence regulator;protein_id=WP_037571699.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 509578 510486 . - . ID=gene-RM615_RS02545;Name=RM615_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02545;old_locus_tag=RM615_02545 NZ_JAVRJW010000001.1 Protein Homology CDS 509578 510486 . - 0 ID=cds-WP_051604930.1;Parent=gene-RM615_RS02545;Dbxref=GenBank:WP_051604930.1;Name=WP_051604930.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=RM615_RS02545;product=lysophosphatidylglycerol phospholipase D;protein_id=WP_051604930.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 510575 510823 . + . ID=gene-RM615_RS02550;Name=RM615_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02550;old_locus_tag=RM615_02550 NZ_JAVRJW010000001.1 Protein Homology CDS 510575 510823 . + 0 ID=cds-WP_037571696.1;Parent=gene-RM615_RS02550;Dbxref=GenBank:WP_037571696.1;Name=WP_037571696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469276.1;locus_tag=RM615_RS02550;product=DUF2129 domain-containing protein;protein_id=WP_037571696.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 510824 511213 . - . ID=gene-RM615_RS02555;Name=RM615_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02555;old_locus_tag=RM615_02555 NZ_JAVRJW010000001.1 Protein Homology CDS 510824 511213 . - 0 ID=cds-WP_037571694.1;Parent=gene-RM615_RS02555;Dbxref=GenBank:WP_037571694.1;Name=WP_037571694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=RM615_RS02555;product=DUF7147 family protein;protein_id=WP_037571694.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 511273 511824 . + . ID=gene-RM615_RS02560;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=RM615_RS02560;old_locus_tag=RM615_02560 NZ_JAVRJW010000001.1 Protein Homology CDS 511273 511824 . + 0 ID=cds-WP_037571691.1;Parent=gene-RM615_RS02560;Dbxref=GenBank:WP_037571691.1;Name=WP_037571691.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=RM615_RS02560;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_037571691.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 511817 512311 . + . ID=gene-RM615_RS02565;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=RM615_RS02565;old_locus_tag=RM615_02565 NZ_JAVRJW010000001.1 Protein Homology CDS 511817 512311 . + 0 ID=cds-WP_037571689.1;Parent=gene-RM615_RS02565;Dbxref=GenBank:WP_037571689.1;Name=WP_037571689.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=RM615_RS02565;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_037571689.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 512757 513902 . - . ID=gene-RM615_RS02570;Name=RM615_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02570;old_locus_tag=RM615_02570 NZ_JAVRJW010000001.1 Protein Homology CDS 512757 513902 . - 0 ID=cds-WP_105965932.1;Parent=gene-RM615_RS02570;Dbxref=GenBank:WP_105965932.1;Name=WP_105965932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276103.1;locus_tag=RM615_RS02570;product=nucleotidyltransferase;protein_id=WP_105965932.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 514029 514571 . + . ID=gene-RM615_RS02575;Name=RM615_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02575;old_locus_tag=RM615_02575 NZ_JAVRJW010000001.1 Protein Homology CDS 514029 514571 . + 0 ID=cds-WP_037571683.1;Parent=gene-RM615_RS02575;Dbxref=GenBank:WP_037571683.1;Name=WP_037571683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=RM615_RS02575;product=YceD family protein;protein_id=WP_037571683.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 514614 514787 . + . ID=gene-RM615_RS02580;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=RM615_RS02580;old_locus_tag=RM615_02580 NZ_JAVRJW010000001.1 Protein Homology CDS 514614 514787 . + 0 ID=cds-WP_037571680.1;Parent=gene-RM615_RS02580;Dbxref=GenBank:WP_037571680.1;Name=WP_037571680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=RM615_RS02580;product=50S ribosomal protein L32;protein_id=WP_037571680.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 515495 516241 . + . ID=gene-RM615_RS02585;Name=RM615_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02585;old_locus_tag=RM615_02585 NZ_JAVRJW010000001.1 Protein Homology CDS 515495 516241 . + 0 ID=cds-WP_037571678.1;Parent=gene-RM615_RS02585;Dbxref=GenBank:WP_037571678.1;Name=WP_037571678.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435366.1;locus_tag=RM615_RS02585;product=TrmH family RNA methyltransferase;protein_id=WP_037571678.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 516542 517606 . + . ID=gene-RM615_RS02590;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=RM615_RS02590;old_locus_tag=RM615_02590 NZ_JAVRJW010000001.1 Protein Homology CDS 516542 517606 . + 0 ID=cds-WP_037571675.1;Parent=gene-RM615_RS02590;Dbxref=GenBank:WP_037571675.1;Name=WP_037571675.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499637.1;locus_tag=RM615_RS02590;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_037571675.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 517600 520005 . + . ID=gene-RM615_RS02595;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=RM615_RS02595;old_locus_tag=RM615_02595 NZ_JAVRJW010000001.1 Protein Homology CDS 517600 520005 . + 0 ID=cds-WP_107363925.1;Parent=gene-RM615_RS02595;Dbxref=GenBank:WP_107363925.1;Name=WP_107363925.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=RM615_RS02595;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_107363925.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 520229 521164 . - . ID=gene-RM615_RS02600;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=RM615_RS02600;old_locus_tag=RM615_02600 NZ_JAVRJW010000001.1 Protein Homology CDS 520229 521164 . - 0 ID=cds-WP_037571670.1;Parent=gene-RM615_RS02600;Dbxref=GenBank:WP_037571670.1;Name=WP_037571670.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303387.1;locus_tag=RM615_RS02600;product=ribonuclease HIII;protein_id=WP_037571670.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 521363 521629 . + . ID=gene-RM615_RS02605;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=RM615_RS02605;old_locus_tag=RM615_02605 NZ_JAVRJW010000001.1 Protein Homology CDS 521363 521629 . + 0 ID=cds-WP_037571667.1;Parent=gene-RM615_RS02605;Dbxref=GenBank:WP_037571667.1;Name=WP_037571667.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830081.1;locus_tag=RM615_RS02605;product=cell division protein ZapA;protein_id=WP_037571667.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 521631 522152 . + . ID=gene-RM615_RS02610;Name=RM615_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02610;old_locus_tag=RM615_02610 NZ_JAVRJW010000001.1 Protein Homology CDS 521631 522152 . + 0 ID=cds-WP_107387794.1;Parent=gene-RM615_RS02610;Dbxref=GenBank:WP_107387794.1;Name=WP_107387794.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: protein motif:HMM:NF014704.7;locus_tag=RM615_RS02610;product=CvpA family protein;protein_id=WP_107387794.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 522226 523929 . + . ID=gene-RM615_RS02615;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=RM615_RS02615;old_locus_tag=RM615_02615 NZ_JAVRJW010000001.1 Protein Homology CDS 522226 523929 . + 0 ID=cds-WP_311540714.1;Parent=gene-RM615_RS02615;Dbxref=GenBank:WP_311540714.1;Name=WP_311540714.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930709.1;locus_tag=RM615_RS02615;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_311540714.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 524106 526454 . + . ID=gene-RM615_RS02620;Name=RM615_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02620;old_locus_tag=RM615_02620 NZ_JAVRJW010000001.1 Protein Homology CDS 524106 526454 . + 0 ID=cds-WP_105965227.1;Parent=gene-RM615_RS02620;Dbxref=GenBank:WP_105965227.1;Name=WP_105965227.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=RM615_RS02620;product=endonuclease MutS2;protein_id=WP_105965227.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 526530 526844 . + . ID=gene-RM615_RS02625;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=RM615_RS02625;old_locus_tag=RM615_02625 NZ_JAVRJW010000001.1 Protein Homology CDS 526530 526844 . + 0 ID=cds-WP_037571657.1;Parent=gene-RM615_RS02625;Dbxref=GenBank:WP_037571657.1;Name=WP_037571657.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=RM615_RS02625;product=thioredoxin;protein_id=WP_037571657.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 526970 528760 . + . ID=gene-RM615_RS02630;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=RM615_RS02630;old_locus_tag=RM615_02630 NZ_JAVRJW010000001.1 Protein Homology CDS 526970 528760 . + 0 ID=cds-WP_037571654.1;Parent=gene-RM615_RS02630;Dbxref=GenBank:WP_037571654.1;Name=WP_037571654.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455471.1;locus_tag=RM615_RS02630;product=excinuclease ABC subunit UvrC;protein_id=WP_037571654.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 528919 529530 . + . ID=gene-RM615_RS02635;Name=RM615_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02635;old_locus_tag=RM615_02635 NZ_JAVRJW010000001.1 Protein Homology CDS 528919 529530 . + 0 ID=cds-WP_037571652.1;Parent=gene-RM615_RS02635;Dbxref=GenBank:WP_037571652.1;Name=WP_037571652.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449979.1;locus_tag=RM615_RS02635;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_037571652.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 529649 531415 . + . ID=gene-RM615_RS02640;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=RM615_RS02640;old_locus_tag=RM615_02640 NZ_JAVRJW010000001.1 Protein Homology CDS 529649 531415 . + 0 ID=cds-WP_037571637.1;Parent=gene-RM615_RS02640;Dbxref=GenBank:WP_037571637.1;Name=WP_037571637.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=RM615_RS02640;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_037571637.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 531415 532254 . + . ID=gene-RM615_RS02645;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=RM615_RS02645;old_locus_tag=RM615_02645 NZ_JAVRJW010000001.1 Protein Homology CDS 531415 532254 . + 0 ID=cds-WP_037571633.1;Parent=gene-RM615_RS02645;Dbxref=GenBank:WP_037571633.1;Name=WP_037571633.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507957.1;locus_tag=RM615_RS02645;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_037571633.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 532481 533290 . + . ID=gene-RM615_RS02650;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=RM615_RS02650;old_locus_tag=RM615_02650 NZ_JAVRJW010000001.1 Protein Homology CDS 532481 533290 . + 0 ID=cds-WP_311540715.1;Parent=gene-RM615_RS02650;Dbxref=GenBank:WP_311540715.1;Name=WP_311540715.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424808.1;locus_tag=RM615_RS02650;product=glutamate racemase;protein_id=WP_311540715.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 533294 533878 . + . ID=gene-RM615_RS02655;Name=RM615_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02655;old_locus_tag=RM615_02655 NZ_JAVRJW010000001.1 Protein Homology CDS 533294 533878 . + 0 ID=cds-WP_037571629.1;Parent=gene-RM615_RS02655;Dbxref=GenBank:WP_037571629.1;Name=WP_037571629.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483628.1;locus_tag=RM615_RS02655;product=XTP/dITP diphosphatase;protein_id=WP_037571629.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 533875 534378 . + . ID=gene-RM615_RS02660;Name=RM615_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02660;old_locus_tag=RM615_02660 NZ_JAVRJW010000001.1 Protein Homology CDS 533875 534378 . + 0 ID=cds-WP_037571627.1;Parent=gene-RM615_RS02660;Dbxref=GenBank:WP_037571627.1;Name=WP_037571627.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830180.1;locus_tag=RM615_RS02660;product=YfcE family phosphodiesterase;protein_id=WP_037571627.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 534616 534921 . - . ID=gene-RM615_RS02665;Name=RM615_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02665;old_locus_tag=RM615_02665 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 534616 534921 . - 0 ID=cds-WP_037571624.1;Parent=gene-RM615_RS02665;Dbxref=GenBank:WP_037571624.1;Name=WP_037571624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS02665;product=hypothetical protein;protein_id=WP_037571624.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 535226 535588 . - . ID=gene-RM615_RS02670;Name=RM615_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02670;old_locus_tag=RM615_02670 NZ_JAVRJW010000001.1 Protein Homology CDS 535226 535588 . - 0 ID=cds-WP_051604953.1;Parent=gene-RM615_RS02670;Dbxref=GenBank:WP_051604953.1;Name=WP_051604953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022980.7;locus_tag=RM615_RS02670;product=complement inhibitor SCIN family protein;protein_id=WP_051604953.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 535887 536744 . + . ID=gene-RM615_RS02675;Name=RM615_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02675;old_locus_tag=RM615_02675 NZ_JAVRJW010000001.1 Protein Homology CDS 535887 536744 . + 0 ID=cds-WP_103159602.1;Parent=gene-RM615_RS02675;Dbxref=GenBank:WP_103159602.1;Name=WP_103159602.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.8;locus_tag=RM615_RS02675;product=M23 family metallopeptidase;protein_id=WP_103159602.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 536898 538163 . - . ID=gene-RM615_RS02680;Name=RM615_RS02680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS02680;old_locus_tag=RM615_02680;pseudo=true NZ_JAVRJW010000001.1 Protein Homology CDS 536898 538163 . - 0 ID=cds-RM615_RS02680;Parent=gene-RM615_RS02680;Note=internal stop;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF014445.7;locus_tag=RM615_RS02680;product=aminoacyltransferase;pseudo=true;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 538507 538580 . + . ID=gene-RM615_RS02685;Name=RM615_RS02685;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS02685;old_locus_tag=RM615_02685 NZ_JAVRJW010000001.1 tRNAscan-SE tRNA 538507 538580 . + . ID=rna-RM615_RS02685;Parent=gene-RM615_RS02685;anticodon=(pos:538541..538543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS02685;product=tRNA-Arg NZ_JAVRJW010000001.1 tRNAscan-SE exon 538507 538580 . + . ID=exon-RM615_RS02685-1;Parent=rna-RM615_RS02685;anticodon=(pos:538541..538543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS02685;product=tRNA-Arg NZ_JAVRJW010000001.1 RefSeq gene 540381 540827 . - . ID=gene-RM615_RS02690;Name=RM615_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02690;old_locus_tag=RM615_02690 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 540381 540827 . - 0 ID=cds-WP_311540894.1;Parent=gene-RM615_RS02690;Dbxref=GenBank:WP_311540894.1;Name=WP_311540894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS02690;product=hypothetical protein;protein_id=WP_311540894.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 541014 541460 . + . ID=gene-RM615_RS02695;Name=RM615_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02695;old_locus_tag=RM615_02695 NZ_JAVRJW010000001.1 Protein Homology CDS 541014 541460 . + 0 ID=cds-WP_037573142.1;Parent=gene-RM615_RS02695;Dbxref=GenBank:WP_037573142.1;Name=WP_037573142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900028.1;locus_tag=RM615_RS02695;product=VOC family protein;protein_id=WP_037573142.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 541509 542813 . - . ID=gene-RM615_RS02700;Name=RM615_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02700;old_locus_tag=RM615_02700 NZ_JAVRJW010000001.1 Protein Homology CDS 541509 542813 . - 0 ID=cds-WP_037573144.1;Parent=gene-RM615_RS02700;Dbxref=GenBank:WP_037573144.1;Name=WP_037573144.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=RM615_RS02700;product=TrkH family potassium uptake protein;protein_id=WP_037573144.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 543017 543091 . - . ID=gene-RM615_RS11165;Name=RM615_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11165 NZ_JAVRJW010000001.1 Protein Homology CDS 543017 543091 . - 0 ID=cds-WP_107359458.1;Parent=gene-RM615_RS11165;Dbxref=GenBank:WP_107359458.1;Name=WP_107359458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=RM615_RS11165;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_107359458.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 543556 543687 . + . ID=gene-RM615_RS02705;Name=RM615_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02705;old_locus_tag=RM615_02705 NZ_JAVRJW010000001.1 Protein Homology CDS 543556 543687 . + 0 ID=cds-WP_069191677.1;Parent=gene-RM615_RS02705;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM615_RS02705;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 543752 543883 . + . ID=gene-RM615_RS02710;Name=RM615_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02710;old_locus_tag=RM615_02710 NZ_JAVRJW010000001.1 Protein Homology CDS 543752 543883 . + 0 ID=cds-WP_069191677.1-2;Parent=gene-RM615_RS02710;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM615_RS02710;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 543948 544079 . + . ID=gene-RM615_RS02715;Name=RM615_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02715;old_locus_tag=RM615_02715 NZ_JAVRJW010000001.1 Protein Homology CDS 543948 544079 . + 0 ID=cds-WP_069191677.1-3;Parent=gene-RM615_RS02715;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM615_RS02715;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 544325 544780 . - . ID=gene-RM615_RS02720;Name=RM615_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02720;old_locus_tag=RM615_02720 NZ_JAVRJW010000001.1 Protein Homology CDS 544325 544780 . - 0 ID=cds-WP_037573146.1;Parent=gene-RM615_RS02720;Dbxref=GenBank:WP_037573146.1;Name=WP_037573146.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424818.1;locus_tag=RM615_RS02720;product=N-acetyltransferase;protein_id=WP_037573146.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 545204 546817 . + . ID=gene-RM615_RS02725;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=RM615_RS02725;old_locus_tag=RM615_02725 NZ_JAVRJW010000001.1 Protein Homology CDS 545204 546817 . + 0 ID=cds-WP_037573149.1;Parent=gene-RM615_RS02725;Dbxref=GenBank:WP_037573149.1;Name=WP_037573149.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483550.1;locus_tag=RM615_RS02725;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_037573149.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 546962 547393 . + . ID=gene-RM615_RS02730;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=RM615_RS02730;old_locus_tag=RM615_02730 NZ_JAVRJW010000001.1 Protein Homology CDS 546962 547393 . + 0 ID=cds-WP_037573151.1;Parent=gene-RM615_RS02730;Dbxref=GenBank:WP_037573151.1;Name=WP_037573151.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=RM615_RS02730;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_037573151.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 547425 548360 . + . ID=gene-RM615_RS02735;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=RM615_RS02735;old_locus_tag=RM615_02735 NZ_JAVRJW010000001.1 Protein Homology CDS 547425 548360 . + 0 ID=cds-WP_037573944.1;Parent=gene-RM615_RS02735;Dbxref=GenBank:WP_037573944.1;Name=WP_037573944.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=RM615_RS02735;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_037573944.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 548378 548797 . + . ID=gene-RM615_RS02740;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=RM615_RS02740;old_locus_tag=RM615_02740 NZ_JAVRJW010000001.1 Protein Homology CDS 548378 548797 . + 0 ID=cds-WP_037573154.1;Parent=gene-RM615_RS02740;Dbxref=GenBank:WP_037573154.1;Name=WP_037573154.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169116.1;locus_tag=RM615_RS02740;product=cell division protein FtsL;protein_id=WP_037573154.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 548778 550919 . + . ID=gene-RM615_RS02745;Name=RM615_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02745;old_locus_tag=RM615_02745 NZ_JAVRJW010000001.1 Protein Homology CDS 548778 550919 . + 0 ID=cds-WP_037573159.1;Parent=gene-RM615_RS02745;Dbxref=GenBank:WP_037573159.1;Name=WP_037573159.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365102.1;locus_tag=RM615_RS02745;product=penicillin-binding protein;protein_id=WP_037573159.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 551088 552053 . + . ID=gene-RM615_RS02750;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=RM615_RS02750;old_locus_tag=RM615_02750 NZ_JAVRJW010000001.1 Protein Homology CDS 551088 552053 . + 0 ID=cds-WP_105962741.1;Parent=gene-RM615_RS02750;Dbxref=GenBank:WP_105962741.1;Name=WP_105962741.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728992.1;locus_tag=RM615_RS02750;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_105962741.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 552054 553403 . + . ID=gene-RM615_RS02755;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=RM615_RS02755;old_locus_tag=RM615_02755 NZ_JAVRJW010000001.1 Protein Homology CDS 552054 553403 . + 0 ID=cds-WP_037573164.1;Parent=gene-RM615_RS02755;Dbxref=GenBank:WP_037573164.1;Name=WP_037573164.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=RM615_RS02755;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_037573164.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 553418 554305 . + . ID=gene-RM615_RS02760;Name=RM615_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02760;old_locus_tag=RM615_02760 NZ_JAVRJW010000001.1 Protein Homology CDS 553418 554305 . + 0 ID=cds-WP_037573166.1;Parent=gene-RM615_RS02760;Dbxref=GenBank:WP_037573166.1;Name=WP_037573166.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169112.1;locus_tag=RM615_RS02760;product=cell division protein FtsQ/DivIB;protein_id=WP_037573166.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 554412 555851 . + . ID=gene-RM615_RS02765;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=RM615_RS02765;old_locus_tag=RM615_02765 NZ_JAVRJW010000001.1 Protein Homology CDS 554412 555851 . + 0 ID=cds-WP_105965230.1;Parent=gene-RM615_RS02765;Dbxref=GenBank:WP_105965230.1;Name=WP_105965230.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=RM615_RS02765;product=cell division protein FtsA;protein_id=WP_105965230.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 555881 557056 . + . ID=gene-RM615_RS02770;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=RM615_RS02770;old_locus_tag=RM615_02770 NZ_JAVRJW010000001.1 Protein Homology CDS 555881 557056 . + 0 ID=cds-WP_037573172.1;Parent=gene-RM615_RS02770;Dbxref=GenBank:WP_037573172.1;Name=WP_037573172.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435258.1;locus_tag=RM615_RS02770;product=cell division protein FtsZ;protein_id=WP_037573172.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 557217 558008 . + . ID=gene-RM615_RS02775;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=RM615_RS02775;old_locus_tag=RM615_02775 NZ_JAVRJW010000001.1 Protein Homology CDS 557217 558008 . + 0 ID=cds-WP_037573175.1;Parent=gene-RM615_RS02775;Dbxref=GenBank:WP_037573175.1;Name=WP_037573175.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=RM615_RS02775;product=peptidoglycan editing factor PgeF;protein_id=WP_037573175.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 558034 558708 . + . ID=gene-RM615_RS02780;Name=RM615_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02780;old_locus_tag=RM615_02780 NZ_JAVRJW010000001.1 Protein Homology CDS 558034 558708 . + 0 ID=cds-WP_105965231.1;Parent=gene-RM615_RS02780;Dbxref=GenBank:WP_105965231.1;Name=WP_105965231.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174546.1;locus_tag=RM615_RS02780;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_105965231.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 558714 559322 . + . ID=gene-RM615_RS02785;Name=RM615_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02785;old_locus_tag=RM615_02785 NZ_JAVRJW010000001.1 Protein Homology CDS 558714 559322 . + 0 ID=cds-WP_105965232.1;Parent=gene-RM615_RS02785;Dbxref=GenBank:WP_105965232.1;Name=WP_105965232.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483538.1;locus_tag=RM615_RS02785;product=cell division protein SepF;protein_id=WP_105965232.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 559334 559627 . + . ID=gene-RM615_RS02790;Name=RM615_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02790;old_locus_tag=RM615_02790 NZ_JAVRJW010000001.1 Protein Homology CDS 559334 559627 . + 0 ID=cds-WP_037573179.1;Parent=gene-RM615_RS02790;Dbxref=GenBank:WP_037573179.1;Name=WP_037573179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=RM615_RS02790;product=YggT family protein;protein_id=WP_037573179.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 559798 560568 . + . ID=gene-RM615_RS02795;Name=RM615_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02795;old_locus_tag=RM615_02795 NZ_JAVRJW010000001.1 Protein Homology CDS 559798 560568 . + 0 ID=cds-WP_037573180.1;Parent=gene-RM615_RS02795;Dbxref=GenBank:WP_037573180.1;Name=WP_037573180.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=RM615_RS02795;product=YlmH family RNA-binding protein;protein_id=WP_037573180.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 560592 561227 . + . ID=gene-RM615_RS02800;Name=RM615_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02800;old_locus_tag=RM615_02800 NZ_JAVRJW010000001.1 Protein Homology CDS 560592 561227 . + 0 ID=cds-WP_037573181.1;Parent=gene-RM615_RS02800;Dbxref=GenBank:WP_037573181.1;Name=WP_037573181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480602.1;locus_tag=RM615_RS02800;product=DivIVA domain-containing protein;protein_id=WP_037573181.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 561418 564165 . + . ID=gene-RM615_RS02805;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=RM615_RS02805;old_locus_tag=RM615_02805 NZ_JAVRJW010000001.1 Protein Homology CDS 561418 564165 . + 0 ID=cds-WP_311540895.1;Parent=gene-RM615_RS02805;Dbxref=GenBank:WP_311540895.1;Name=WP_311540895.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=RM615_RS02805;product=isoleucine--tRNA ligase;protein_id=WP_311540895.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 564457 564663 . + . ID=gene-RM615_RS02810;Name=RM615_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02810;old_locus_tag=RM615_02810 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 564457 564663 . + 0 ID=cds-WP_037573185.1;Parent=gene-RM615_RS02810;Dbxref=GenBank:WP_037573185.1;Name=WP_037573185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS02810;product=hypothetical protein;protein_id=WP_037573185.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 564783 565262 . + . ID=gene-RM615_RS02815;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=RM615_RS02815;old_locus_tag=RM615_02815 NZ_JAVRJW010000001.1 Protein Homology CDS 564783 565262 . + 0 ID=cds-WP_037573187.1;Parent=gene-RM615_RS02815;Dbxref=GenBank:WP_037573187.1;Name=WP_037573187.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=RM615_RS02815;product=signal peptidase II;protein_id=WP_037573187.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 565272 566189 . + . ID=gene-RM615_RS02820;Name=RM615_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02820;old_locus_tag=RM615_02820 NZ_JAVRJW010000001.1 Protein Homology CDS 565272 566189 . + 0 ID=cds-WP_037573189.1;Parent=gene-RM615_RS02820;Dbxref=GenBank:WP_037573189.1;Name=WP_037573189.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448828.1;locus_tag=RM615_RS02820;product=RluA family pseudouridine synthase;protein_id=WP_037573189.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 566484 567008 . + . ID=gene-RM615_RS02825;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=RM615_RS02825;old_locus_tag=RM615_02825 NZ_JAVRJW010000001.1 Protein Homology CDS 566484 567008 . + 0 ID=cds-WP_037573946.1;Parent=gene-RM615_RS02825;Dbxref=GenBank:WP_037573946.1;Name=WP_037573946.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303315.1;locus_tag=RM615_RS02825;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_037573946.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 567170 568462 . + . ID=gene-RM615_RS02830;Name=RM615_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02830;old_locus_tag=RM615_02830 NZ_JAVRJW010000001.1 Protein Homology CDS 567170 568462 . + 0 ID=cds-WP_103159266.1;Parent=gene-RM615_RS02830;Dbxref=GenBank:WP_103159266.1;Name=WP_103159266.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637156.1;locus_tag=RM615_RS02830;product=uracil-xanthine permease family protein;protein_id=WP_103159266.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 568482 569357 . + . ID=gene-RM615_RS02835;Name=RM615_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02835;old_locus_tag=RM615_02835 NZ_JAVRJW010000001.1 Protein Homology CDS 568482 569357 . + 0 ID=cds-WP_103159267.1;Parent=gene-RM615_RS02835;Dbxref=GenBank:WP_103159267.1;Name=WP_103159267.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016173.1;locus_tag=RM615_RS02835;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_103159267.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 569371 570645 . + . ID=gene-RM615_RS02840;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=RM615_RS02840;old_locus_tag=RM615_02840 NZ_JAVRJW010000001.1 Protein Homology CDS 569371 570645 . + 0 ID=cds-WP_105996642.1;Parent=gene-RM615_RS02840;Dbxref=GenBank:WP_105996642.1;Name=WP_105996642.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=RM615_RS02840;product=dihydroorotase;protein_id=WP_105996642.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 570645 571745 . + . ID=gene-RM615_RS02845;Name=RM615_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02845;old_locus_tag=RM615_02845 NZ_JAVRJW010000001.1 Protein Homology CDS 570645 571745 . + 0 ID=cds-WP_103159269.1;Parent=gene-RM615_RS02845;Dbxref=GenBank:WP_103159269.1;Name=WP_103159269.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167399.1;locus_tag=RM615_RS02845;product=carbamoyl phosphate synthase small subunit;protein_id=WP_103159269.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 571738 574911 . + . ID=gene-RM615_RS02850;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=RM615_RS02850;old_locus_tag=RM615_02850 NZ_JAVRJW010000001.1 Protein Homology CDS 571738 574911 . + 0 ID=cds-WP_311540896.1;Parent=gene-RM615_RS02850;Dbxref=GenBank:WP_311540896.1;Name=WP_311540896.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=RM615_RS02850;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_311540896.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 574924 575688 . + . ID=gene-RM615_RS02855;Name=RM615_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02855;old_locus_tag=RM615_02855 NZ_JAVRJW010000001.1 Protein Homology CDS 574924 575688 . + 0 ID=cds-WP_037573197.1;Parent=gene-RM615_RS02855;Dbxref=GenBank:WP_037573197.1;Name=WP_037573197.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=RM615_RS02855;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_037573197.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 575685 576602 . + . ID=gene-RM615_RS02860;Name=RM615_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02860;old_locus_tag=RM615_02860 NZ_JAVRJW010000001.1 Protein Homology CDS 575685 576602 . + 0 ID=cds-WP_103159271.1;Parent=gene-RM615_RS02860;Dbxref=GenBank:WP_103159271.1;Name=WP_103159271.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=RM615_RS02860;product=dihydroorotate dehydrogenase;protein_id=WP_103159271.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 576606 577298 . + . ID=gene-RM615_RS02865;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=RM615_RS02865;old_locus_tag=RM615_02865 NZ_JAVRJW010000001.1 Protein Homology CDS 576606 577298 . + 0 ID=cds-WP_037573200.1;Parent=gene-RM615_RS02865;Dbxref=GenBank:WP_037573200.1;Name=WP_037573200.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381639.1;locus_tag=RM615_RS02865;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_037573200.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 577298 577906 . + . ID=gene-RM615_RS02870;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=RM615_RS02870;old_locus_tag=RM615_02870 NZ_JAVRJW010000001.1 Protein Homology CDS 577298 577906 . + 0 ID=cds-WP_165806136.1;Parent=gene-RM615_RS02870;Dbxref=GenBank:WP_165806136.1;Name=WP_165806136.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=RM615_RS02870;product=orotate phosphoribosyltransferase;protein_id=WP_165806136.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 578250 578663 . + . ID=gene-RM615_RS02875;Name=RM615_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02875;old_locus_tag=RM615_02875 NZ_JAVRJW010000001.1 Protein Homology CDS 578250 578663 . + 0 ID=cds-WP_105962755.1;Parent=gene-RM615_RS02875;Dbxref=GenBank:WP_105962755.1;Name=WP_105962755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=RM615_RS02875;product=VOC family protein;protein_id=WP_105962755.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 578679 580379 . - . ID=gene-RM615_RS02880;Name=RM615_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02880;old_locus_tag=RM615_02880 NZ_JAVRJW010000001.1 Protein Homology CDS 578679 580379 . - 0 ID=cds-WP_105962756.1;Parent=gene-RM615_RS02880;Dbxref=GenBank:WP_105962756.1;Name=WP_105962756.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167388.1;locus_tag=RM615_RS02880;product=Rqc2 family fibronectin-binding protein;protein_id=WP_105962756.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 580541 581164 . + . ID=gene-RM615_RS02885;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=RM615_RS02885;old_locus_tag=RM615_02885 NZ_JAVRJW010000001.1 Protein Homology CDS 580541 581164 . + 0 ID=cds-WP_037573210.1;Parent=gene-RM615_RS02885;Dbxref=GenBank:WP_037573210.1;Name=WP_037573210.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=RM615_RS02885;product=guanylate kinase;protein_id=WP_037573210.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 581164 581373 . + . ID=gene-RM615_RS02890;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=RM615_RS02890;old_locus_tag=RM615_02890 NZ_JAVRJW010000001.1 Protein Homology CDS 581164 581373 . + 0 ID=cds-WP_037573213.1;Parent=gene-RM615_RS02890;Dbxref=GenBank:WP_037573213.1;Name=WP_037573213.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=RM615_RS02890;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_037573213.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 581552 582772 . + . ID=gene-RM615_RS02895;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=RM615_RS02895;old_locus_tag=RM615_02895 NZ_JAVRJW010000001.1 Protein Homology CDS 581552 582772 . + 0 ID=cds-WP_105962757.1;Parent=gene-RM615_RS02895;Dbxref=GenBank:WP_105962757.1;Name=WP_105962757.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483516.1;locus_tag=RM615_RS02895;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_105962757.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 582763 585180 . + . ID=gene-RM615_RS02900;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=RM615_RS02900;old_locus_tag=RM615_02900 NZ_JAVRJW010000001.1 Protein Homology CDS 582763 585180 . + 0 ID=cds-WP_069191678.1;Parent=gene-RM615_RS02900;Dbxref=GenBank:WP_069191678.1;Name=WP_069191678.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813047.1;locus_tag=RM615_RS02900;product=primosomal protein N';protein_id=WP_069191678.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 585549 586037 . + . ID=gene-RM615_RS02905;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM615_RS02905;old_locus_tag=RM615_02905 NZ_JAVRJW010000001.1 Protein Homology CDS 585549 586037 . + 0 ID=cds-WP_105962759.1;Parent=gene-RM615_RS02905;Dbxref=GenBank:WP_105962759.1;Name=WP_105962759.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493109.1;locus_tag=RM615_RS02905;product=peptide deformylase;protein_id=WP_105962759.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 586024 586962 . + . ID=gene-RM615_RS02910;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=RM615_RS02910;old_locus_tag=RM615_02910 NZ_JAVRJW010000001.1 Protein Homology CDS 586024 586962 . + 0 ID=cds-WP_037573223.1;Parent=gene-RM615_RS02910;Dbxref=GenBank:WP_037573223.1;Name=WP_037573223.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507902.1;locus_tag=RM615_RS02910;product=methionyl-tRNA formyltransferase;protein_id=WP_037573223.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 586963 588273 . + . ID=gene-RM615_RS02915;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=RM615_RS02915;old_locus_tag=RM615_02915 NZ_JAVRJW010000001.1 Protein Homology CDS 586963 588273 . + 0 ID=cds-WP_105965238.1;Parent=gene-RM615_RS02915;Dbxref=GenBank:WP_105965238.1;Name=WP_105965238.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900089.1;locus_tag=RM615_RS02915;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_105965238.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 588270 589364 . + . ID=gene-RM615_RS02920;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=RM615_RS02920;old_locus_tag=RM615_02920 NZ_JAVRJW010000001.1 Protein Homology CDS 588270 589364 . + 0 ID=cds-WP_037573228.1;Parent=gene-RM615_RS02920;Dbxref=GenBank:WP_037573228.1;Name=WP_037573228.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=RM615_RS02920;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_037573228.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 589370 590113 . + . ID=gene-RM615_RS02925;Name=RM615_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02925;old_locus_tag=RM615_02925 NZ_JAVRJW010000001.1 Protein Homology CDS 589370 590113 . + 0 ID=cds-WP_037573232.1;Parent=gene-RM615_RS02925;Dbxref=GenBank:WP_037573232.1;Name=WP_037573232.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=RM615_RS02925;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_037573232.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 590110 592113 . + . ID=gene-RM615_RS02930;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=RM615_RS02930;old_locus_tag=RM615_02930 NZ_JAVRJW010000001.1 Protein Homology CDS 590110 592113 . + 0 ID=cds-WP_105965240.1;Parent=gene-RM615_RS02930;Dbxref=GenBank:WP_105965240.1;Name=WP_105965240.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165532.1;locus_tag=RM615_RS02930;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_105965240.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 592293 593570 . + . ID=gene-RM615_RS02935;Name=RM615_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02935;old_locus_tag=RM615_02935 NZ_JAVRJW010000001.1 Protein Homology CDS 592293 593570 . + 0 ID=cds-WP_037573237.1;Parent=gene-RM615_RS02935;Dbxref=GenBank:WP_037573237.1;Name=WP_037573237.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911561.1;locus_tag=RM615_RS02935;product=cytochrome P450;protein_id=WP_037573237.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 593832 594707 . + . ID=gene-RM615_RS02940;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=RM615_RS02940;old_locus_tag=RM615_02940 NZ_JAVRJW010000001.1 Protein Homology CDS 593832 594707 . + 0 ID=cds-WP_105962763.1;Parent=gene-RM615_RS02940;Dbxref=GenBank:WP_105962763.1;Name=WP_105962763.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=RM615_RS02940;product=ribosome small subunit-dependent GTPase A;protein_id=WP_105962763.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 594707 595357 . + . ID=gene-RM615_RS02945;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=RM615_RS02945;old_locus_tag=RM615_02945 NZ_JAVRJW010000001.1 Protein Homology CDS 594707 595357 . + 0 ID=cds-WP_037573241.1;Parent=gene-RM615_RS02945;Dbxref=GenBank:WP_037573241.1;Name=WP_037573241.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=RM615_RS02945;product=ribulose-phosphate 3-epimerase;protein_id=WP_037573241.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 595361 595996 . + . ID=gene-RM615_RS02950;Name=RM615_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02950;old_locus_tag=RM615_02950 NZ_JAVRJW010000001.1 Protein Homology CDS 595361 595996 . + 0 ID=cds-WP_105965241.1;Parent=gene-RM615_RS02950;Dbxref=GenBank:WP_105965241.1;Name=WP_105965241.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424872.1;locus_tag=RM615_RS02950;product=thiamine diphosphokinase;protein_id=WP_105965241.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 596145 596333 . - . ID=gene-RM615_RS02955;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=RM615_RS02955;old_locus_tag=RM615_02955 NZ_JAVRJW010000001.1 Protein Homology CDS 596145 596333 . - 0 ID=cds-WP_037564748.1;Parent=gene-RM615_RS02955;Dbxref=GenBank:WP_037564748.1;Name=WP_037564748.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=RM615_RS02955;product=50S ribosomal protein L28;protein_id=WP_037564748.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 596740 597114 . + . ID=gene-RM615_RS02960;Name=RM615_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02960;old_locus_tag=RM615_02960 NZ_JAVRJW010000001.1 Protein Homology CDS 596740 597114 . + 0 ID=cds-WP_037573243.1;Parent=gene-RM615_RS02960;Dbxref=GenBank:WP_037573243.1;Name=WP_037573243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=RM615_RS02960;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037573243.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 597127 598785 . + . ID=gene-RM615_RS02965;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=RM615_RS02965;old_locus_tag=RM615_02965 NZ_JAVRJW010000001.1 Protein Homology CDS 597127 598785 . + 0 ID=cds-WP_105962764.1;Parent=gene-RM615_RS02965;Dbxref=GenBank:WP_105962764.1;Name=WP_105962764.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446265.1;locus_tag=RM615_RS02965;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_105962764.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 598943 599608 . + . ID=gene-RM615_RS02970;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM615_RS02970;old_locus_tag=RM615_02970 NZ_JAVRJW010000001.1 Protein Homology CDS 598943 599608 . + 0 ID=cds-WP_037573246.1;Parent=gene-RM615_RS02970;Dbxref=GenBank:WP_037573246.1;Name=WP_037573246.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303291.1;locus_tag=RM615_RS02970;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_037573246.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 599627 600496 . + . ID=gene-RM615_RS02975;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM615_RS02975;old_locus_tag=RM615_02975 NZ_JAVRJW010000001.1 Protein Homology CDS 599627 600496 . + 0 ID=cds-WP_311540897.1;Parent=gene-RM615_RS02975;Dbxref=GenBank:WP_311540897.1;Name=WP_311540897.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=RM615_RS02975;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_311540897.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 600498 602543 . + . ID=gene-RM615_RS02980;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=RM615_RS02980;old_locus_tag=RM615_02980 NZ_JAVRJW010000001.1 Protein Homology CDS 600498 602543 . + 0 ID=cds-WP_037573252.1;Parent=gene-RM615_RS02980;Dbxref=GenBank:WP_037573252.1;Name=WP_037573252.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=RM615_RS02980;product=ATP-dependent DNA helicase RecG;protein_id=WP_037573252.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 602694 603143 . + . ID=gene-RM615_RS02985;Name=RM615_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS02985;old_locus_tag=RM615_02985 NZ_JAVRJW010000001.1 Protein Homology CDS 602694 603143 . + 0 ID=cds-WP_037573255.1;Parent=gene-RM615_RS02985;Dbxref=GenBank:WP_037573255.1;Name=WP_037573255.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF057839.1;locus_tag=RM615_RS02985;product=ASCH domain-containing protein;protein_id=WP_037573255.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 603231 603800 . + . ID=gene-RM615_RS02990;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=RM615_RS02990;old_locus_tag=RM615_02990 NZ_JAVRJW010000001.1 Protein Homology CDS 603231 603800 . + 0 ID=cds-WP_037573258.1;Parent=gene-RM615_RS02990;Dbxref=GenBank:WP_037573258.1;Name=WP_037573258.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174579.1;locus_tag=RM615_RS02990;product=transcription factor FapR;protein_id=WP_037573258.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 603793 604779 . + . ID=gene-RM615_RS02995;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=RM615_RS02995;old_locus_tag=RM615_02995 NZ_JAVRJW010000001.1 Protein Homology CDS 603793 604779 . + 0 ID=cds-WP_037573261.1;Parent=gene-RM615_RS02995;Dbxref=GenBank:WP_037573261.1;Name=WP_037573261.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450581.1;locus_tag=RM615_RS02995;product=phosphate acyltransferase PlsX;protein_id=WP_037573261.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 604772 605698 . + . ID=gene-RM615_RS03000;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=RM615_RS03000;old_locus_tag=RM615_03000 NZ_JAVRJW010000001.1 Protein Homology CDS 604772 605698 . + 0 ID=cds-WP_037573267.1;Parent=gene-RM615_RS03000;Dbxref=GenBank:WP_037573267.1;Name=WP_037573267.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489765.1;locus_tag=RM615_RS03000;product=ACP S-malonyltransferase;protein_id=WP_037573267.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 605691 606428 . + . ID=gene-RM615_RS03005;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=RM615_RS03005;old_locus_tag=RM615_03005 NZ_JAVRJW010000001.1 Protein Homology CDS 605691 606428 . + 0 ID=cds-WP_103159277.1;Parent=gene-RM615_RS03005;Dbxref=GenBank:WP_103159277.1;Name=WP_103159277.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=RM615_RS03005;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_103159277.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 606604 606837 . + . ID=gene-RM615_RS03010;Name=RM615_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03010;old_locus_tag=RM615_03010 NZ_JAVRJW010000001.1 Protein Homology CDS 606604 606837 . + 0 ID=cds-WP_019165520.1;Parent=gene-RM615_RS03010;Dbxref=GenBank:WP_019165520.1;Name=WP_019165520.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=RM615_RS03010;product=acyl carrier protein;protein_id=WP_019165520.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 607006 607677 . + . ID=gene-RM615_RS03015;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=RM615_RS03015;old_locus_tag=RM615_03015 NZ_JAVRJW010000001.1 Protein Homology CDS 607006 607677 . + 0 ID=cds-WP_371874978.1;Parent=gene-RM615_RS03015;Dbxref=GenBank:WP_371874978.1;Name=WP_371874978.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480668.1;locus_tag=RM615_RS03015;product=ribonuclease III;protein_id=WP_371874978.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 607681 611247 . + . ID=gene-RM615_RS03020;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=RM615_RS03020;old_locus_tag=RM615_03020 NZ_JAVRJW010000001.1 Protein Homology CDS 607681 611247 . + 0 ID=cds-WP_311540898.1;Parent=gene-RM615_RS03020;Dbxref=GenBank:WP_311540898.1;Name=WP_311540898.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729018.1;locus_tag=RM615_RS03020;product=chromosome segregation protein SMC;protein_id=WP_311540898.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 611248 612603 . + . ID=gene-RM615_RS03025;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=RM615_RS03025;old_locus_tag=RM615_03025 NZ_JAVRJW010000001.1 Protein Homology CDS 611248 612603 . + 0 ID=cds-WP_037573280.1;Parent=gene-RM615_RS03025;Dbxref=GenBank:WP_037573280.1;Name=WP_037573280.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365083.1;locus_tag=RM615_RS03025;product=signal recognition particle-docking protein FtsY;protein_id=WP_037573280.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 612590 612922 . + . ID=gene-RM615_RS03030;Name=RM615_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03030;old_locus_tag=RM615_03030 NZ_JAVRJW010000001.1 Protein Homology CDS 612590 612922 . + 0 ID=cds-WP_037573283.1;Parent=gene-RM615_RS03030;Dbxref=GenBank:WP_037573283.1;Name=WP_037573283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473260.1;locus_tag=RM615_RS03030;product=putative DNA-binding protein;protein_id=WP_037573283.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 612936 614303 . + . ID=gene-RM615_RS03035;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=RM615_RS03035;old_locus_tag=RM615_03035 NZ_JAVRJW010000001.1 Protein Homology CDS 612936 614303 . + 0 ID=cds-WP_311540899.1;Parent=gene-RM615_RS03035;Dbxref=GenBank:WP_311540899.1;Name=WP_311540899.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=RM615_RS03035;product=signal recognition particle protein;protein_id=WP_311540899.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 614548 614823 . + . ID=gene-RM615_RS03040;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=RM615_RS03040;old_locus_tag=RM615_03040 NZ_JAVRJW010000001.1 Protein Homology CDS 614548 614823 . + 0 ID=cds-WP_037573289.1;Parent=gene-RM615_RS03040;Dbxref=GenBank:WP_037573289.1;Name=WP_037573289.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=RM615_RS03040;product=30S ribosomal protein S16;protein_id=WP_037573289.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 614927 615430 . + . ID=gene-RM615_RS03045;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=RM615_RS03045;old_locus_tag=RM615_03045 NZ_JAVRJW010000001.1 Protein Homology CDS 614927 615430 . + 0 ID=cds-WP_037573292.1;Parent=gene-RM615_RS03045;Dbxref=GenBank:WP_037573292.1;Name=WP_037573292.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=RM615_RS03045;product=ribosome maturation factor RimM;protein_id=WP_037573292.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 615427 616164 . + . ID=gene-RM615_RS03050;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=RM615_RS03050;old_locus_tag=RM615_03050 NZ_JAVRJW010000001.1 Protein Homology CDS 615427 616164 . + 0 ID=cds-WP_037573295.1;Parent=gene-RM615_RS03050;Dbxref=GenBank:WP_037573295.1;Name=WP_037573295.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=RM615_RS03050;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_037573295.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 616266 616616 . + . ID=gene-RM615_RS03055;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=RM615_RS03055;old_locus_tag=RM615_03055 NZ_JAVRJW010000001.1 Protein Homology CDS 616266 616616 . + 0 ID=cds-WP_037573298.1;Parent=gene-RM615_RS03055;Dbxref=GenBank:WP_037573298.1;Name=WP_037573298.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=RM615_RS03055;product=50S ribosomal protein L19;protein_id=WP_037573298.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 616924 617565 . + . ID=gene-RM615_RS03060;Name=RM615_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03060;old_locus_tag=RM615_03060 NZ_JAVRJW010000001.1 Protein Homology CDS 616924 617565 . + 0 ID=cds-WP_084276006.1;Parent=gene-RM615_RS03060;Dbxref=GenBank:WP_084276006.1;Name=WP_084276006.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365386.1;locus_tag=RM615_RS03060;product=phosphatase PAP2 family protein;protein_id=WP_084276006.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 617620 620205 . - . ID=gene-RM615_RS03065;Name=RM615_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03065;old_locus_tag=RM615_03065 NZ_JAVRJW010000001.1 Protein Homology CDS 617620 620205 . - 0 ID=cds-WP_232160073.1;Parent=gene-RM615_RS03065;Dbxref=GenBank:WP_232160073.1;Name=WP_232160073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510970.1;locus_tag=RM615_RS03065;product=YfhO family protein;protein_id=WP_232160073.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 620202 622808 . - . ID=gene-RM615_RS03070;Name=RM615_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03070;old_locus_tag=RM615_03070 NZ_JAVRJW010000001.1 Protein Homology CDS 620202 622808 . - 0 ID=cds-WP_311540900.1;Parent=gene-RM615_RS03070;Dbxref=GenBank:WP_311540900.1;Name=WP_311540900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=RM615_RS03070;product=YfhO family protein;protein_id=WP_311540900.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 622827 623189 . - . ID=gene-RM615_RS03075;Name=RM615_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03075;old_locus_tag=RM615_03075 NZ_JAVRJW010000001.1 Protein Homology CDS 622827 623189 . - 0 ID=cds-WP_037573953.1;Parent=gene-RM615_RS03075;Dbxref=GenBank:WP_037573953.1;Name=WP_037573953.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510053.1;locus_tag=RM615_RS03075;product=GtrA family protein;protein_id=WP_037573953.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 623421 624311 . + . ID=gene-RM615_RS03080;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=RM615_RS03080;old_locus_tag=RM615_03080 NZ_JAVRJW010000001.1 Protein Homology CDS 623421 624311 . + 0 ID=cds-WP_037573306.1;Parent=gene-RM615_RS03080;Dbxref=GenBank:WP_037573306.1;Name=WP_037573306.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448797.1;locus_tag=RM615_RS03080;product=ribosome biogenesis GTPase YlqF;protein_id=WP_037573306.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 624292 625071 . + . ID=gene-RM615_RS03085;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=RM615_RS03085;old_locus_tag=RM615_03085 NZ_JAVRJW010000001.1 Protein Homology CDS 624292 625071 . + 0 ID=cds-WP_311540901.1;Parent=gene-RM615_RS03085;Dbxref=GenBank:WP_311540901.1;Name=WP_311540901.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=RM615_RS03085;product=ribonuclease HII;protein_id=WP_311540901.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 625150 625419 . + . ID=gene-RM615_RS03090;Name=RM615_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03090;old_locus_tag=RM615_03090 NZ_JAVRJW010000001.1 Protein Homology CDS 625150 625419 . + 0 ID=cds-WP_037573311.1;Parent=gene-RM615_RS03090;Dbxref=GenBank:WP_037573311.1;Name=WP_037573311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424899.1;locus_tag=RM615_RS03090;product=hypothetical protein;protein_id=WP_037573311.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 625644 626810 . + . ID=gene-RM615_RS03095;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=RM615_RS03095;old_locus_tag=RM615_03095 NZ_JAVRJW010000001.1 Protein Homology CDS 625644 626810 . + 0 ID=cds-WP_311540902.1;Parent=gene-RM615_RS03095;Dbxref=GenBank:WP_311540902.1;Name=WP_311540902.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=RM615_RS03095;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_311540902.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 626831 627739 . + . ID=gene-RM615_RS03100;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=RM615_RS03100;old_locus_tag=RM615_03100 NZ_JAVRJW010000001.1 Protein Homology CDS 626831 627739 . + 0 ID=cds-WP_037573316.1;Parent=gene-RM615_RS03100;Dbxref=GenBank:WP_037573316.1;Name=WP_037573316.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499754.1;locus_tag=RM615_RS03100;product=succinate--CoA ligase subunit alpha;protein_id=WP_037573316.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 628044 628904 . + . ID=gene-RM615_RS03105;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=RM615_RS03105;old_locus_tag=RM615_03105 NZ_JAVRJW010000001.1 Protein Homology CDS 628044 628904 . + 0 ID=cds-WP_311540903.1;Parent=gene-RM615_RS03105;Dbxref=GenBank:WP_311540903.1;Name=WP_311540903.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167869.1;locus_tag=RM615_RS03105;product=DNA-processing protein DprA;protein_id=WP_311540903.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 629000 631069 . + . ID=gene-RM615_RS03110;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=RM615_RS03110;old_locus_tag=RM615_03110 NZ_JAVRJW010000001.1 Protein Homology CDS 629000 631069 . + 0 ID=cds-WP_037573320.1;Parent=gene-RM615_RS03110;Dbxref=GenBank:WP_037573320.1;Name=WP_037573320.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=RM615_RS03110;product=type I DNA topoisomerase;protein_id=WP_037573320.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 631082 632386 . + . ID=gene-RM615_RS03115;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=RM615_RS03115;old_locus_tag=RM615_03115 NZ_JAVRJW010000001.1 Protein Homology CDS 631082 632386 . + 0 ID=cds-WP_107363476.1;Parent=gene-RM615_RS03115;Dbxref=GenBank:WP_107363476.1;Name=WP_107363476.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=RM615_RS03115;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_107363476.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 632508 633398 . + . ID=gene-RM615_RS03120;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=RM615_RS03120;old_locus_tag=RM615_03120 NZ_JAVRJW010000001.1 Protein Homology CDS 632508 633398 . + 0 ID=cds-WP_037573324.1;Parent=gene-RM615_RS03120;Dbxref=GenBank:WP_037573324.1;Name=WP_037573324.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453085.1;locus_tag=RM615_RS03120;product=tyrosine recombinase XerC;protein_id=WP_037573324.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 633404 633946 . + . ID=gene-RM615_RS03125;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=RM615_RS03125;old_locus_tag=RM615_03125 NZ_JAVRJW010000001.1 Protein Homology CDS 633404 633946 . + 0 ID=cds-WP_037573327.1;Parent=gene-RM615_RS03125;Dbxref=GenBank:WP_037573327.1;Name=WP_037573327.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=RM615_RS03125;product=ATP-dependent protease subunit HslV;protein_id=WP_037573327.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 633963 635372 . + . ID=gene-RM615_RS03130;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=RM615_RS03130;old_locus_tag=RM615_03130 NZ_JAVRJW010000001.1 Protein Homology CDS 633963 635372 . + 0 ID=cds-WP_103159285.1;Parent=gene-RM615_RS03130;Dbxref=GenBank:WP_103159285.1;Name=WP_103159285.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=RM615_RS03130;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_103159285.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 635387 636160 . + . ID=gene-RM615_RS03135;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=RM615_RS03135;old_locus_tag=RM615_03135 NZ_JAVRJW010000001.1 Protein Homology CDS 635387 636160 . + 0 ID=cds-WP_037573333.1;Parent=gene-RM615_RS03135;Dbxref=GenBank:WP_037573333.1;Name=WP_037573333.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=RM615_RS03135;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_037573333.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 636322 637110 . + . ID=gene-RM615_RS03140;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=RM615_RS03140;old_locus_tag=RM615_03140 NZ_JAVRJW010000001.1 Protein Homology CDS 636322 637110 . + 0 ID=cds-WP_037573336.1;Parent=gene-RM615_RS03140;Dbxref=GenBank:WP_037573336.1;Name=WP_037573336.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=RM615_RS03140;product=30S ribosomal protein S2;protein_id=WP_037573336.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 637325 638206 . + . ID=gene-RM615_RS03145;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=RM615_RS03145;old_locus_tag=RM615_03145 NZ_JAVRJW010000001.1 Protein Homology CDS 637325 638206 . + 0 ID=cds-WP_182472242.1;Parent=gene-RM615_RS03145;Dbxref=GenBank:WP_182472242.1;Name=WP_182472242.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499767.1;locus_tag=RM615_RS03145;product=translation elongation factor Ts;protein_id=WP_182472242.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 638360 639082 . + . ID=gene-RM615_RS03150;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=RM615_RS03150;old_locus_tag=RM615_03150 NZ_JAVRJW010000001.1 Protein Homology CDS 638360 639082 . + 0 ID=cds-WP_037573342.1;Parent=gene-RM615_RS03150;Dbxref=GenBank:WP_037573342.1;Name=WP_037573342.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499768.1;locus_tag=RM615_RS03150;product=UMP kinase;protein_id=WP_037573342.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 639102 639656 . + . ID=gene-RM615_RS03155;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=RM615_RS03155;old_locus_tag=RM615_03155 NZ_JAVRJW010000001.1 Protein Homology CDS 639102 639656 . + 0 ID=cds-WP_037573344.1;Parent=gene-RM615_RS03155;Dbxref=GenBank:WP_037573344.1;Name=WP_037573344.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=RM615_RS03155;product=ribosome recycling factor;protein_id=WP_037573344.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 639806 640567 . + . ID=gene-RM615_RS03160;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=RM615_RS03160;old_locus_tag=RM615_03160 NZ_JAVRJW010000001.1 Protein Homology CDS 639806 640567 . + 0 ID=cds-WP_037573351.1;Parent=gene-RM615_RS03160;Dbxref=GenBank:WP_037573351.1;Name=WP_037573351.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=RM615_RS03160;product=undecaprenyl pyrophosphate synthase;protein_id=WP_037573351.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 640581 641360 . + . ID=gene-RM615_RS03165;Name=RM615_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03165;old_locus_tag=RM615_03165 NZ_JAVRJW010000001.1 Protein Homology CDS 640581 641360 . + 0 ID=cds-WP_037573352.1;Parent=gene-RM615_RS03165;Dbxref=GenBank:WP_037573352.1;Name=WP_037573352.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=RM615_RS03165;product=phosphatidate cytidylyltransferase;protein_id=WP_037573352.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 641376 642506 . + . ID=gene-RM615_RS03170;Name=RM615_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03170;old_locus_tag=RM615_03170 NZ_JAVRJW010000001.1 Protein Homology CDS 641376 642506 . + 0 ID=cds-WP_037573956.1;Parent=gene-RM615_RS03170;Dbxref=GenBank:WP_037573956.1;Name=WP_037573956.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381738.1;locus_tag=RM615_RS03170;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_037573956.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 642513 643793 . + . ID=gene-RM615_RS03175;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=RM615_RS03175;old_locus_tag=RM615_03175 NZ_JAVRJW010000001.1 Protein Homology CDS 642513 643793 . + 0 ID=cds-WP_037573354.1;Parent=gene-RM615_RS03175;Dbxref=GenBank:WP_037573354.1;Name=WP_037573354.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=RM615_RS03175;product=RIP metalloprotease RseP;protein_id=WP_037573354.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 643821 645527 . + . ID=gene-RM615_RS03180;Name=RM615_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03180;old_locus_tag=RM615_03180 NZ_JAVRJW010000001.1 Protein Homology CDS 643821 645527 . + 0 ID=cds-WP_037573356.1;Parent=gene-RM615_RS03180;Dbxref=GenBank:WP_037573356.1;Name=WP_037573356.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453094.1;locus_tag=RM615_RS03180;product=proline--tRNA ligase;protein_id=WP_037573356.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 645725 650035 . + . ID=gene-RM615_RS03185;Name=RM615_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03185;old_locus_tag=RM615_03185 NZ_JAVRJW010000001.1 Protein Homology CDS 645725 650035 . + 0 ID=cds-WP_037573358.1;Parent=gene-RM615_RS03185;Dbxref=GenBank:WP_037573358.1;Name=WP_037573358.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303258.1;locus_tag=RM615_RS03185;product=PolC-type DNA polymerase III;protein_id=WP_037573358.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 650162 650629 . + . ID=gene-RM615_RS03190;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=RM615_RS03190;old_locus_tag=RM615_03190 NZ_JAVRJW010000001.1 Protein Homology CDS 650162 650629 . + 0 ID=cds-WP_037573359.1;Parent=gene-RM615_RS03190;Dbxref=GenBank:WP_037573359.1;Name=WP_037573359.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=RM615_RS03190;product=ribosome maturation factor RimP;protein_id=WP_037573359.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq pseudogene 650649 651681 . + . ID=gene-RM615_RS03195;Name=nusA;end_range=651681,.;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=RM615_RS03195;old_locus_tag=RM615_03195;partial=true;pseudo=true NZ_JAVRJW010000001.1 Protein Homology CDS 650649 651681 . + 0 ID=cds-RM615_RS03195;Parent=gene-RM615_RS03195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006353,GO:0003723;end_range=651681,.;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499776.1;locus_tag=RM615_RS03195;partial=true;product=transcription termination factor NusA;pseudo=true;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 651837 652124 . + . ID=gene-RM615_RS03200;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=RM615_RS03200;old_locus_tag=RM615_03200 NZ_JAVRJW010000001.1 Protein Homology CDS 651837 652124 . + 0 ID=cds-WP_037573364.1;Parent=gene-RM615_RS03200;Dbxref=GenBank:WP_037573364.1;Name=WP_037573364.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=RM615_RS03200;product=RNase P modulator RnpM;protein_id=WP_037573364.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 652121 652426 . + . ID=gene-RM615_RS03205;Name=RM615_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03205;old_locus_tag=RM615_03205 NZ_JAVRJW010000001.1 Protein Homology CDS 652121 652426 . + 0 ID=cds-WP_105962780.1;Parent=gene-RM615_RS03205;Dbxref=GenBank:WP_105962780.1;Name=WP_105962780.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=RM615_RS03205;product=YlxQ family RNA-binding protein;protein_id=WP_105962780.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 652443 654590 . + . ID=gene-RM615_RS03210;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=RM615_RS03210;old_locus_tag=RM615_03210 NZ_JAVRJW010000001.1 Protein Homology CDS 652443 654590 . + 0 ID=cds-WP_105962781.1;Parent=gene-RM615_RS03210;Dbxref=GenBank:WP_105962781.1;Name=WP_105962781.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898111.1;locus_tag=RM615_RS03210;product=translation initiation factor IF-2;protein_id=WP_105962781.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 654784 655170 . + . ID=gene-RM615_RS03215;Name=RM615_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03215;old_locus_tag=RM615_03215 NZ_JAVRJW010000001.1 Protein Homology CDS 654784 655170 . + 0 ID=cds-WP_241954920.1;Parent=gene-RM615_RS03215;Dbxref=GenBank:WP_241954920.1;Name=WP_241954920.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480708.1;locus_tag=RM615_RS03215;product=VOC family protein;protein_id=WP_241954920.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 655269 655613 . + . ID=gene-RM615_RS03220;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=RM615_RS03220;old_locus_tag=RM615_03220 NZ_JAVRJW010000001.1 Protein Homology CDS 655269 655613 . + 0 ID=cds-WP_037573372.1;Parent=gene-RM615_RS03220;Dbxref=GenBank:WP_037573372.1;Name=WP_037573372.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=RM615_RS03220;product=30S ribosome-binding factor RbfA;protein_id=WP_037573372.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 655685 656602 . + . ID=gene-RM615_RS03225;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=RM615_RS03225;old_locus_tag=RM615_03225 NZ_JAVRJW010000001.1 Protein Homology CDS 655685 656602 . + 0 ID=cds-WP_311540905.1;Parent=gene-RM615_RS03225;Dbxref=GenBank:WP_311540905.1;Name=WP_311540905.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=RM615_RS03225;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_311540905.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 656617 657588 . + . ID=gene-RM615_RS03230;Name=RM615_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03230;old_locus_tag=RM615_03230 NZ_JAVRJW010000001.1 Protein Homology CDS 656617 657588 . + 0 ID=cds-WP_037573377.1;Parent=gene-RM615_RS03230;Dbxref=GenBank:WP_037573377.1;Name=WP_037573377.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009558826.1;locus_tag=RM615_RS03230;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_037573377.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 657692 657961 . + . ID=gene-RM615_RS03235;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=RM615_RS03235;old_locus_tag=RM615_03235 NZ_JAVRJW010000001.1 Protein Homology CDS 657692 657961 . + 0 ID=cds-WP_037573379.1;Parent=gene-RM615_RS03235;Dbxref=GenBank:WP_037573379.1;Name=WP_037573379.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=RM615_RS03235;product=30S ribosomal protein S15;protein_id=WP_037573379.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 658125 660230 . + . ID=gene-RM615_RS03240;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=RM615_RS03240;old_locus_tag=RM615_03240 NZ_JAVRJW010000001.1 Protein Homology CDS 658125 660230 . + 0 ID=cds-WP_103159293.1;Parent=gene-RM615_RS03240;Dbxref=GenBank:WP_103159293.1;Name=WP_103159293.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900164.1;locus_tag=RM615_RS03240;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_103159293.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 660508 661824 . + . ID=gene-RM615_RS03245;Name=RM615_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03245;old_locus_tag=RM615_03245 NZ_JAVRJW010000001.1 Protein Homology CDS 660508 661824 . + 0 ID=cds-WP_311540906.1;Parent=gene-RM615_RS03245;Dbxref=GenBank:WP_311540906.1;Name=WP_311540906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039646018.1;locus_tag=RM615_RS03245;product=M30 family zinc metallopeptidase;protein_id=WP_311540906.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 662132 663805 . + . ID=gene-RM615_RS03250;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=RM615_RS03250;old_locus_tag=RM615_03250 NZ_JAVRJW010000001.1 Protein Homology CDS 662132 663805 . + 0 ID=cds-WP_037573383.1;Parent=gene-RM615_RS03250;Dbxref=GenBank:WP_037573383.1;Name=WP_037573383.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=RM615_RS03250;product=ribonuclease J2;protein_id=WP_037573383.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 664038 666389 . + . ID=gene-RM615_RS03255;Name=RM615_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03255;old_locus_tag=RM615_03255 NZ_JAVRJW010000001.1 Protein Homology CDS 664038 666389 . + 0 ID=cds-WP_311540907.1;Parent=gene-RM615_RS03255;Dbxref=GenBank:WP_311540907.1;Name=WP_311540907.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165454.1;locus_tag=RM615_RS03255;product=DNA translocase FtsK;protein_id=WP_311540907.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 666392 667108 . + . ID=gene-RM615_RS03260;Name=RM615_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03260;old_locus_tag=RM615_03260 NZ_JAVRJW010000001.1 Protein Homology CDS 666392 667108 . + 0 ID=cds-WP_037573385.1;Parent=gene-RM615_RS03260;Dbxref=GenBank:WP_037573385.1;Name=WP_037573385.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=RM615_RS03260;product=GntR family transcriptional regulator;protein_id=WP_037573385.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 667139 668413 . + . ID=gene-RM615_RS03265;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=RM615_RS03265;old_locus_tag=RM615_03265 NZ_JAVRJW010000001.1 Protein Homology CDS 667139 668413 . + 0 ID=cds-WP_037573386.1;Parent=gene-RM615_RS03265;Dbxref=GenBank:WP_037573386.1;Name=WP_037573386.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=RM615_RS03265;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_037573386.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 668406 669692 . + . ID=gene-RM615_RS03270;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=RM615_RS03270;old_locus_tag=RM615_03270 NZ_JAVRJW010000001.1 Protein Homology CDS 668406 669692 . + 0 ID=cds-WP_037573387.1;Parent=gene-RM615_RS03270;Dbxref=GenBank:WP_037573387.1;Name=WP_037573387.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638356.1;locus_tag=RM615_RS03270;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_037573387.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 669692 670396 . + . ID=gene-RM615_RS03275;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=RM615_RS03275;old_locus_tag=RM615_03275 NZ_JAVRJW010000001.1 Protein Homology CDS 669692 670396 . + 0 ID=cds-WP_037573389.1;Parent=gene-RM615_RS03275;Dbxref=GenBank:WP_037573389.1;Name=WP_037573389.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662935.1;locus_tag=RM615_RS03275;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_037573389.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 670448 671317 . + . ID=gene-RM615_RS03280;Name=RM615_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03280;old_locus_tag=RM615_03280 NZ_JAVRJW010000001.1 Protein Homology CDS 670448 671317 . + 0 ID=cds-WP_037573391.1;Parent=gene-RM615_RS03280;Dbxref=GenBank:WP_037573391.1;Name=WP_037573391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381771.1;locus_tag=RM615_RS03280;product=DUF3388 domain-containing protein;protein_id=WP_037573391.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 671330 671725 . + . ID=gene-RM615_RS03285;Name=RM615_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03285;old_locus_tag=RM615_03285 NZ_JAVRJW010000001.1 Protein Homology CDS 671330 671725 . + 0 ID=cds-WP_037573396.1;Parent=gene-RM615_RS03285;Dbxref=GenBank:WP_037573396.1;Name=WP_037573396.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024805.7;locus_tag=RM615_RS03285;product=helix-turn-helix domain-containing protein;protein_id=WP_037573396.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 671766 672350 . + . ID=gene-RM615_RS03290;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=RM615_RS03290;old_locus_tag=RM615_03290 NZ_JAVRJW010000001.1 Protein Homology CDS 671766 672350 . + 0 ID=cds-WP_037573398.1;Parent=gene-RM615_RS03290;Dbxref=GenBank:WP_037573398.1;Name=WP_037573398.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=RM615_RS03290;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_037573398.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 672457 673608 . + . ID=gene-RM615_RS03295;Name=RM615_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03295;old_locus_tag=RM615_03295 NZ_JAVRJW010000001.1 Protein Homology CDS 672457 673608 . + 0 ID=cds-WP_311540908.1;Parent=gene-RM615_RS03295;Dbxref=GenBank:WP_311540908.1;Name=WP_311540908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465812.1;locus_tag=RM615_RS03295;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_311540908.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 673770 674813 . + . ID=gene-RM615_RS03300;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=RM615_RS03300;old_locus_tag=RM615_03300 NZ_JAVRJW010000001.1 Protein Homology CDS 673770 674813 . + 0 ID=cds-WP_037573405.1;Parent=gene-RM615_RS03300;Dbxref=GenBank:WP_037573405.1;Name=WP_037573405.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=RM615_RS03300;product=recombinase RecA;protein_id=WP_037573405.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 675356 676915 . + . ID=gene-RM615_RS03305;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=RM615_RS03305;old_locus_tag=RM615_03305 NZ_JAVRJW010000001.1 Protein Homology CDS 675356 676915 . + 0 ID=cds-WP_037573407.1;Parent=gene-RM615_RS03305;Dbxref=GenBank:WP_037573407.1;Name=WP_037573407.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=RM615_RS03305;product=ribonuclease Y;protein_id=WP_037573407.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 676987 677205 . - . ID=gene-RM615_RS03310;Name=RM615_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03310;old_locus_tag=RM615_03310 NZ_JAVRJW010000001.1 Protein Homology CDS 676987 677205 . - 0 ID=cds-WP_037573959.1;Parent=gene-RM615_RS03310;Dbxref=GenBank:WP_037573959.1;Name=WP_037573959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483434.1;locus_tag=RM615_RS03310;product=hypothetical protein;protein_id=WP_037573959.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 677407 677793 . + . ID=gene-RM615_RS03315;Name=RM615_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03315;old_locus_tag=RM615_03315 NZ_JAVRJW010000001.1 Protein Homology CDS 677407 677793 . + 0 ID=cds-WP_037573409.1;Parent=gene-RM615_RS03315;Dbxref=GenBank:WP_037573409.1;Name=WP_037573409.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=RM615_RS03315;product=ArsR/SmtB family transcription factor;protein_id=WP_037573409.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 677771 679912 . + . ID=gene-RM615_RS03320;Name=RM615_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03320;old_locus_tag=RM615_03320 NZ_JAVRJW010000001.1 Protein Homology CDS 677771 679912 . + 0 ID=cds-WP_037573410.1;Parent=gene-RM615_RS03320;Dbxref=GenBank:WP_037573410.1;Name=WP_037573410.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016838775.1;locus_tag=RM615_RS03320;product=heavy metal translocating P-type ATPase;protein_id=WP_037573410.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 680018 680809 . + . ID=gene-RM615_RS03325;Name=RM615_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03325;old_locus_tag=RM615_03325 NZ_JAVRJW010000001.1 Protein Homology CDS 680018 680809 . + 0 ID=cds-WP_037573411.1;Parent=gene-RM615_RS03325;Dbxref=GenBank:WP_037573411.1;Name=WP_037573411.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275911.1;locus_tag=RM615_RS03325;product=TIGR00282 family metallophosphoesterase;protein_id=WP_037573411.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 680922 682679 . + . ID=gene-RM615_RS03330;Name=RM615_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03330;old_locus_tag=RM615_03330 NZ_JAVRJW010000001.1 Protein Homology CDS 680922 682679 . + 0 ID=cds-WP_037573412.1;Parent=gene-RM615_RS03330;Dbxref=GenBank:WP_037573412.1;Name=WP_037573412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=RM615_RS03330;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_037573412.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 682680 683546 . + . ID=gene-RM615_RS03335;Name=RM615_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03335;old_locus_tag=RM615_03335 NZ_JAVRJW010000001.1 Protein Homology CDS 682680 683546 . + 0 ID=cds-WP_037573413.1;Parent=gene-RM615_RS03335;Dbxref=GenBank:WP_037573413.1;Name=WP_037573413.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=RM615_RS03335;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_037573413.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 683620 683916 . + . ID=gene-RM615_RS03340;Name=RM615_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03340;old_locus_tag=RM615_03340 NZ_JAVRJW010000001.1 Protein Homology CDS 683620 683916 . + 0 ID=cds-WP_037573414.1;Parent=gene-RM615_RS03340;Dbxref=GenBank:WP_037573414.1;Name=WP_037573414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453122.1;locus_tag=RM615_RS03340;product=thiamine-binding protein;protein_id=WP_037573414.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 684055 685596 . + . ID=gene-RM615_RS03345;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=RM615_RS03345;old_locus_tag=RM615_03345 NZ_JAVRJW010000001.1 Protein Homology CDS 684055 685596 . + 0 ID=cds-WP_311540909.1;Parent=gene-RM615_RS03345;Dbxref=GenBank:WP_311540909.1;Name=WP_311540909.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167791.1;locus_tag=RM615_RS03345;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_311540909.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 685596 685976 . + . ID=gene-RM615_RS03350;Name=RM615_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03350;old_locus_tag=RM615_03350 NZ_JAVRJW010000001.1 Protein Homology CDS 685596 685976 . + 0 ID=cds-WP_037573418.1;Parent=gene-RM615_RS03350;Dbxref=GenBank:WP_037573418.1;Name=WP_037573418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=RM615_RS03350;product=YlbF family regulator;protein_id=WP_037573418.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 685981 686490 . + . ID=gene-RM615_RS03355;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=RM615_RS03355;old_locus_tag=RM615_03355 NZ_JAVRJW010000001.1 Protein Homology CDS 685981 686490 . + 0 ID=cds-WP_037573420.1;Parent=gene-RM615_RS03355;Dbxref=GenBank:WP_037573420.1;Name=WP_037573420.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424951.1;locus_tag=RM615_RS03355;product=energy coupling factor transporter S component ThiW;protein_id=WP_037573420.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 686629 689226 . + . ID=gene-RM615_RS03360;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=RM615_RS03360;old_locus_tag=RM615_03360 NZ_JAVRJW010000001.1 Protein Homology CDS 686629 689226 . + 0 ID=cds-WP_037573423.1;Parent=gene-RM615_RS03360;Dbxref=GenBank:WP_037573423.1;Name=WP_037573423.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=RM615_RS03360;product=DNA mismatch repair protein MutS;protein_id=WP_037573423.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 689243 691234 . + . ID=gene-RM615_RS03365;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=RM615_RS03365;old_locus_tag=RM615_03365 NZ_JAVRJW010000001.1 Protein Homology CDS 689243 691234 . + 0 ID=cds-WP_037573425.1;Parent=gene-RM615_RS03365;Dbxref=GenBank:WP_037573425.1;Name=WP_037573425.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:NF000950.0;locus_tag=RM615_RS03365;product=DNA mismatch repair endonuclease MutL;protein_id=WP_037573425.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 691247 691780 . + . ID=gene-RM615_RS03370;Name=RM615_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03370;old_locus_tag=RM615_03370 NZ_JAVRJW010000001.1 Protein Homology CDS 691247 691780 . + 0 ID=cds-WP_037573427.1;Parent=gene-RM615_RS03370;Dbxref=GenBank:WP_037573427.1;Name=WP_037573427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=RM615_RS03370;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_037573427.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 691804 692832 . + . ID=gene-RM615_RS03375;Name=RM615_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03375;old_locus_tag=RM615_03375 NZ_JAVRJW010000001.1 Protein Homology CDS 691804 692832 . + 0 ID=cds-WP_308460853.1;Parent=gene-RM615_RS03375;Dbxref=GenBank:WP_308460853.1;Name=WP_308460853.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424955.1;locus_tag=RM615_RS03375;product=S66 family peptidase;protein_id=WP_308460853.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 693048 693863 . + . ID=gene-RM615_RS03380;Name=RM615_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03380;old_locus_tag=RM615_03380 NZ_JAVRJW010000001.1 Protein Homology CDS 693048 693863 . + 0 ID=cds-WP_037573429.1;Parent=gene-RM615_RS03380;Dbxref=GenBank:WP_037573429.1;Name=WP_037573429.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=RM615_RS03380;product=MIP/aquaporin family protein;protein_id=WP_037573429.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 693949 695451 . + . ID=gene-RM615_RS03385;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=RM615_RS03385;old_locus_tag=RM615_03385 NZ_JAVRJW010000001.1 Protein Homology CDS 693949 695451 . + 0 ID=cds-WP_037573435.1;Parent=gene-RM615_RS03385;Dbxref=GenBank:WP_037573435.1;Name=WP_037573435.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176556.1;locus_tag=RM615_RS03385;product=glycerol kinase GlpK;protein_id=WP_037573435.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 695575 697248 . + . ID=gene-RM615_RS03390;Name=RM615_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03390;old_locus_tag=RM615_03390 NZ_JAVRJW010000001.1 Protein Homology CDS 695575 697248 . + 0 ID=cds-WP_037573436.1;Parent=gene-RM615_RS03390;Dbxref=GenBank:WP_037573436.1;Name=WP_037573436.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900199.1;locus_tag=RM615_RS03390;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_037573436.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 697537 698472 . + . ID=gene-RM615_RS03395;Name=RM615_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03395;old_locus_tag=RM615_03395 NZ_JAVRJW010000001.1 Protein Homology CDS 697537 698472 . + 0 ID=cds-WP_103158842.1;Parent=gene-RM615_RS03395;Dbxref=GenBank:WP_103158842.1;Name=WP_103158842.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=RM615_RS03395;product=alpha/beta hydrolase;protein_id=WP_103158842.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 698474 699409 . + . ID=gene-RM615_RS03400;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=RM615_RS03400;old_locus_tag=RM615_03400 NZ_JAVRJW010000001.1 Protein Homology CDS 698474 699409 . + 0 ID=cds-WP_037573964.1;Parent=gene-RM615_RS03400;Dbxref=GenBank:WP_037573964.1;Name=WP_037573964.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499812.1;locus_tag=RM615_RS03400;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_037573964.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 699425 699631 . + . ID=gene-RM615_RS03405;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=RM615_RS03405;old_locus_tag=RM615_03405 NZ_JAVRJW010000001.1 Protein Homology CDS 699425 699631 . + 0 ID=cds-WP_037573438.1;Parent=gene-RM615_RS03405;Dbxref=GenBank:WP_037573438.1;Name=WP_037573438.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=RM615_RS03405;product=RNA chaperone Hfq;protein_id=WP_037573438.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 699754 700227 . - . ID=gene-RM615_RS03410;Name=RM615_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03410;old_locus_tag=RM615_03410 NZ_JAVRJW010000001.1 Protein Homology CDS 699754 700227 . - 0 ID=cds-WP_037573439.1;Parent=gene-RM615_RS03410;Dbxref=GenBank:WP_037573439.1;Name=WP_037573439.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614023.1;locus_tag=RM615_RS03410;product=glutathione peroxidase;protein_id=WP_037573439.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 700349 701581 . + . ID=gene-RM615_RS03415;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=RM615_RS03415;old_locus_tag=RM615_03415 NZ_JAVRJW010000001.1 Protein Homology CDS 700349 701581 . + 0 ID=cds-WP_037573440.1;Parent=gene-RM615_RS03415;Dbxref=GenBank:WP_037573440.1;Name=WP_037573440.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381825.1;locus_tag=RM615_RS03415;product=GTPase HflX;protein_id=WP_037573440.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 701596 702834 . + . ID=gene-RM615_RS03420;Name=RM615_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03420;old_locus_tag=RM615_03420 NZ_JAVRJW010000001.1 Protein Homology CDS 701596 702834 . + 0 ID=cds-WP_037573442.1;Parent=gene-RM615_RS03420;Dbxref=GenBank:WP_037573442.1;Name=WP_037573442.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448823.1;locus_tag=RM615_RS03420;product=methionine gamma-lyase family protein;protein_id=WP_037573442.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 702954 703319 . + . ID=gene-RM615_RS03425;Name=RM615_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03425;old_locus_tag=RM615_03425 NZ_JAVRJW010000001.1 Protein Homology CDS 702954 703319 . + 0 ID=cds-WP_037573443.1;Parent=gene-RM615_RS03425;Dbxref=GenBank:WP_037573443.1;Name=WP_037573443.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463893.1;locus_tag=RM615_RS03425;product=MerR family transcriptional regulator;protein_id=WP_037573443.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 703342 704682 . + . ID=gene-RM615_RS03430;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=RM615_RS03430;old_locus_tag=RM615_03430 NZ_JAVRJW010000001.1 Protein Homology CDS 703342 704682 . + 0 ID=cds-WP_037573446.1;Parent=gene-RM615_RS03430;Dbxref=GenBank:WP_037573446.1;Name=WP_037573446.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=RM615_RS03430;product=type I glutamate--ammonia ligase;protein_id=WP_037573446.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 706174 706386 . + . ID=gene-RM615_RS03435;Name=RM615_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03435;old_locus_tag=RM615_03435 NZ_JAVRJW010000001.1 Protein Homology CDS 706174 706386 . + 0 ID=cds-WP_103159576.1;Parent=gene-RM615_RS03435;Dbxref=GenBank:WP_103159576.1;Name=WP_103159576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997672.1;locus_tag=RM615_RS03435;product=Trp family transcriptional regulator;protein_id=WP_103159576.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 706570 707187 . + . ID=gene-RM615_RS03440;Name=RM615_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03440;old_locus_tag=RM615_03440 NZ_JAVRJW010000001.1 Protein Homology CDS 706570 707187 . + 0 ID=cds-WP_051604956.1;Parent=gene-RM615_RS03440;Dbxref=GenBank:WP_051604956.1;Name=WP_051604956.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM615_RS03440;product=ABC transporter ATP-binding protein;protein_id=WP_051604956.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 707386 707958 . + . ID=gene-RM615_RS03445;Name=RM615_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03445;old_locus_tag=RM615_03445 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 707386 707958 . + 0 ID=cds-WP_375712995.1;Parent=gene-RM615_RS03445;Dbxref=GenBank:WP_375712995.1;Name=WP_375712995.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS03445;product=ABC transporter permease;protein_id=WP_375712995.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 707948 709039 . + . ID=gene-RM615_RS03450;Name=RM615_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03450;old_locus_tag=RM615_03450 NZ_JAVRJW010000001.1 Protein Homology CDS 707948 709039 . + 0 ID=cds-WP_311540912.1;Parent=gene-RM615_RS03450;Dbxref=GenBank:WP_311540912.1;Name=WP_311540912.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF019350.7;locus_tag=RM615_RS03450;product=sensor histidine kinase;protein_id=WP_311540912.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 709036 709638 . + . ID=gene-RM615_RS03455;Name=RM615_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03455;old_locus_tag=RM615_03455 NZ_JAVRJW010000001.1 Protein Homology CDS 709036 709638 . + 0 ID=cds-WP_103159573.1;Parent=gene-RM615_RS03455;Dbxref=GenBank:WP_103159573.1;Name=WP_103159573.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000624458.1;locus_tag=RM615_RS03455;product=response regulator transcription factor;protein_id=WP_103159573.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 709740 709949 . - . ID=gene-RM615_RS03460;Name=RM615_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03460;old_locus_tag=RM615_03460 NZ_JAVRJW010000001.1 Protein Homology CDS 709740 709949 . - 0 ID=cds-WP_103159572.1;Parent=gene-RM615_RS03460;Dbxref=GenBank:WP_103159572.1;Name=WP_103159572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=RM615_RS03460;product=hypothetical protein;protein_id=WP_103159572.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 710093 710599 . + . ID=gene-RM615_RS03465;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=RM615_RS03465;old_locus_tag=RM615_03465 NZ_JAVRJW010000001.1 Protein Homology CDS 710093 710599 . + 0 ID=cds-WP_037573459.1;Parent=gene-RM615_RS03465;Dbxref=GenBank:WP_037573459.1;Name=WP_037573459.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=RM615_RS03465;product=thermonuclease NucI;protein_id=WP_037573459.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 710805 711170 . - . ID=gene-RM615_RS03470;Name=RM615_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03470;old_locus_tag=RM615_03470 NZ_JAVRJW010000001.1 Protein Homology CDS 710805 711170 . - 0 ID=cds-WP_037573462.1;Parent=gene-RM615_RS03470;Dbxref=GenBank:WP_037573462.1;Name=WP_037573462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384374.1;locus_tag=RM615_RS03470;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037573462.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 711682 712272 . + . ID=gene-RM615_RS03475;Name=RM615_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03475;old_locus_tag=RM615_03475 NZ_JAVRJW010000001.1 Protein Homology CDS 711682 712272 . + 0 ID=cds-WP_311540914.1;Parent=gene-RM615_RS03475;Dbxref=GenBank:WP_311540914.1;Name=WP_311540914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424990.1;locus_tag=RM615_RS03475;product=hypothetical protein;protein_id=WP_311540914.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 712424 713773 . - . ID=gene-RM615_RS03480;Name=RM615_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03480;old_locus_tag=RM615_03480 NZ_JAVRJW010000001.1 Protein Homology CDS 712424 713773 . - 0 ID=cds-WP_311540930.1;Parent=gene-RM615_RS03480;Dbxref=GenBank:WP_311540930.1;Name=WP_311540930.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167760.1;locus_tag=RM615_RS03480;product=aspartate kinase;protein_id=WP_311540930.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 713964 715247 . + . ID=gene-RM615_RS03485;Name=RM615_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03485;old_locus_tag=RM615_03485 NZ_JAVRJW010000001.1 Protein Homology CDS 713964 715247 . + 0 ID=cds-WP_119505185.1;Parent=gene-RM615_RS03485;Dbxref=GenBank:WP_119505185.1;Name=WP_119505185.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614000.1;locus_tag=RM615_RS03485;product=homoserine dehydrogenase;protein_id=WP_119505185.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 715253 716317 . + . ID=gene-RM615_RS03490;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=RM615_RS03490;old_locus_tag=RM615_03490 NZ_JAVRJW010000001.1 Protein Homology CDS 715253 716317 . + 0 ID=cds-WP_037573474.1;Parent=gene-RM615_RS03490;Dbxref=GenBank:WP_037573474.1;Name=WP_037573474.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=RM615_RS03490;product=threonine synthase;protein_id=WP_037573474.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 716317 717234 . + . ID=gene-RM615_RS03495;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=RM615_RS03495;old_locus_tag=RM615_03495 NZ_JAVRJW010000001.1 Protein Homology CDS 716317 717234 . + 0 ID=cds-WP_311540931.1;Parent=gene-RM615_RS03495;Dbxref=GenBank:WP_311540931.1;Name=WP_311540931.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507779.1;locus_tag=RM615_RS03495;product=homoserine kinase;protein_id=WP_311540931.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 717338 718138 . + . ID=gene-RM615_RS03500;Name=RM615_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03500;old_locus_tag=RM615_03500 NZ_JAVRJW010000001.1 Protein Homology CDS 717338 718138 . + 0 ID=cds-WP_037573479.1;Parent=gene-RM615_RS03500;Dbxref=GenBank:WP_037573479.1;Name=WP_037573479.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=RM615_RS03500;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037573479.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 718199 718513 . - . ID=gene-RM615_RS03505;Name=RM615_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03505;old_locus_tag=RM615_03505 NZ_JAVRJW010000001.1 Protein Homology CDS 718199 718513 . - 0 ID=cds-WP_037573482.1;Parent=gene-RM615_RS03505;Dbxref=GenBank:WP_037573482.1;Name=WP_037573482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830950.1;locus_tag=RM615_RS03505;product=hypothetical protein;protein_id=WP_037573482.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 718629 720086 . - . ID=gene-RM615_RS03510;Name=RM615_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03510;old_locus_tag=RM615_03510 NZ_JAVRJW010000001.1 Protein Homology CDS 718629 720086 . - 0 ID=cds-WP_037573486.1;Parent=gene-RM615_RS03510;Dbxref=GenBank:WP_037573486.1;Name=WP_037573486.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900224.1;locus_tag=RM615_RS03510;product=amino acid permease;protein_id=WP_037573486.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 720294 721790 . + . ID=gene-RM615_RS03515;Name=RM615_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03515;old_locus_tag=RM615_03515 NZ_JAVRJW010000001.1 Protein Homology CDS 720294 721790 . + 0 ID=cds-WP_037573488.1;Parent=gene-RM615_RS03515;Dbxref=GenBank:WP_037573488.1;Name=WP_037573488.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=RM615_RS03515;product=catalase;protein_id=WP_037573488.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 721928 722077 . - . ID=gene-RM615_RS03520;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM615_RS03520;old_locus_tag=RM615_03520 NZ_JAVRJW010000001.1 Protein Homology CDS 721928 722077 . - 0 ID=cds-WP_014613994.1;Parent=gene-RM615_RS03520;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM615_RS03520;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 722265 722534 . + . ID=gene-RM615_RS03525;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=RM615_RS03525;old_locus_tag=RM615_03525 NZ_JAVRJW010000001.1 Protein Homology CDS 722265 722534 . + 0 ID=cds-WP_037573490.1;Parent=gene-RM615_RS03525;Dbxref=GenBank:WP_037573490.1;Name=WP_037573490.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=RM615_RS03525;product=30S ribosomal protein S14;protein_id=WP_037573490.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 722610 723587 . + . ID=gene-RM615_RS03530;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=RM615_RS03530;old_locus_tag=RM615_03530 NZ_JAVRJW010000001.1 Protein Homology CDS 722610 723587 . + 0 ID=cds-WP_037573492.1;Parent=gene-RM615_RS03530;Dbxref=GenBank:WP_037573492.1;Name=WP_037573492.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=RM615_RS03530;product=GMP reductase;protein_id=WP_037573492.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 723681 724613 . + . ID=gene-RM615_RS03535;Name=RM615_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03535;old_locus_tag=RM615_03535 NZ_JAVRJW010000001.1 Protein Homology CDS 723681 724613 . + 0 ID=cds-WP_182465451.1;Parent=gene-RM615_RS03535;Dbxref=GenBank:WP_182465451.1;Name=WP_182465451.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167752.1;locus_tag=RM615_RS03535;product=CAP domain-containing protein;protein_id=WP_182465451.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 724865 725488 . - . ID=gene-RM615_RS03540;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=RM615_RS03540;old_locus_tag=RM615_03540 NZ_JAVRJW010000001.1 Protein Homology CDS 724865 725488 . - 0 ID=cds-WP_037573494.1;Parent=gene-RM615_RS03540;Dbxref=GenBank:WP_037573494.1;Name=WP_037573494.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=RM615_RS03540;product=transcriptional repressor LexA;protein_id=WP_037573494.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 725632 725856 . + . ID=gene-RM615_RS03545;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=RM615_RS03545;old_locus_tag=RM615_03545 NZ_JAVRJW010000001.1 Protein Homology CDS 725632 725856 . + 0 ID=cds-WP_037573496.1;Parent=gene-RM615_RS03545;Dbxref=GenBank:WP_037573496.1;Name=WP_037573496.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=RM615_RS03545;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_037573496.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 726085 726324 . + . ID=gene-RM615_RS03550;Name=RM615_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03550;old_locus_tag=RM615_03550 NZ_JAVRJW010000001.1 Protein Homology CDS 726085 726324 . + 0 ID=cds-WP_037573504.1;Parent=gene-RM615_RS03550;Dbxref=GenBank:WP_037573504.1;Name=WP_037573504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442718.1;locus_tag=RM615_RS03550;product=DUF896 domain-containing protein;protein_id=WP_037573504.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 726404 728392 . + . ID=gene-RM615_RS03555;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=RM615_RS03555;old_locus_tag=RM615_03555 NZ_JAVRJW010000001.1 Protein Homology CDS 726404 728392 . + 0 ID=cds-WP_037573506.1;Parent=gene-RM615_RS03555;Dbxref=GenBank:WP_037573506.1;Name=WP_037573506.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001661967.1;locus_tag=RM615_RS03555;product=transketolase;protein_id=WP_037573506.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 728661 728888 . + . ID=gene-RM615_RS03560;Name=RM615_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03560;old_locus_tag=RM615_03560 NZ_JAVRJW010000001.1 Protein Homology CDS 728661 728888 . + 0 ID=cds-WP_210433439.1;Parent=gene-RM615_RS03560;Dbxref=GenBank:WP_210433439.1;Name=WP_210433439.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=RM615_RS03560;product=YneF family protein;protein_id=WP_210433439.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 729068 729541 . + . ID=gene-RM615_RS03565;Name=RM615_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03565;old_locus_tag=RM615_03565 NZ_JAVRJW010000001.1 Protein Homology CDS 729068 729541 . + 0 ID=cds-WP_037573510.1;Parent=gene-RM615_RS03565;Dbxref=GenBank:WP_037573510.1;Name=WP_037573510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165384.1;locus_tag=RM615_RS03565;product=CcdC family protein;protein_id=WP_037573510.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 729686 730804 . + . ID=gene-RM615_RS03570;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=RM615_RS03570;old_locus_tag=RM615_03570 NZ_JAVRJW010000001.1 Protein Homology CDS 729686 730804 . + 0 ID=cds-WP_037573512.1;Parent=gene-RM615_RS03570;Dbxref=GenBank:WP_037573512.1;Name=WP_037573512.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=RM615_RS03570;product=exonuclease subunit SbcD;protein_id=WP_037573512.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 730806 733838 . + . ID=gene-RM615_RS03575;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=RM615_RS03575;old_locus_tag=RM615_03575 NZ_JAVRJW010000001.1 Protein Homology CDS 730806 733838 . + 0 ID=cds-WP_107360491.1;Parent=gene-RM615_RS03575;Dbxref=GenBank:WP_107360491.1;Name=WP_107360491.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF041751.2;locus_tag=RM615_RS03575;product=exonuclease subunit SbcC;protein_id=WP_107360491.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 734104 734469 . - . ID=gene-RM615_RS03580;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=RM615_RS03580;old_locus_tag=RM615_03580 NZ_JAVRJW010000001.1 Protein Homology CDS 734104 734469 . - 0 ID=cds-WP_037573524.1;Parent=gene-RM615_RS03580;Dbxref=GenBank:WP_037573524.1;Name=WP_037573524.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480859.1;locus_tag=RM615_RS03580;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_037573524.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 734714 736348 . + . ID=gene-RM615_RS03585;Name=RM615_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03585;old_locus_tag=RM615_03585 NZ_JAVRJW010000001.1 Protein Homology CDS 734714 736348 . + 0 ID=cds-WP_103158881.1;Parent=gene-RM615_RS03585;Dbxref=GenBank:WP_103158881.1;Name=WP_103158881.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=RM615_RS03585;product=BCCT family transporter;protein_id=WP_103158881.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 736625 739327 . + . ID=gene-RM615_RS03590;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=RM615_RS03590;old_locus_tag=RM615_03590 NZ_JAVRJW010000001.1 Protein Homology CDS 736625 739327 . + 0 ID=cds-WP_037573531.1;Parent=gene-RM615_RS03590;Dbxref=GenBank:WP_037573531.1;Name=WP_037573531.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=RM615_RS03590;product=aconitate hydratase AcnA;protein_id=WP_037573531.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 739517 739969 . + . ID=gene-RM615_RS03595;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=RM615_RS03595;old_locus_tag=RM615_03595 NZ_JAVRJW010000001.1 Protein Homology CDS 739517 739969 . + 0 ID=cds-WP_037573533.1;Parent=gene-RM615_RS03595;Dbxref=GenBank:WP_037573533.1;Name=WP_037573533.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831194.1;locus_tag=RM615_RS03595;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_037573533.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 740124 740423 . - . ID=gene-RM615_RS03600;Name=RM615_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03600;old_locus_tag=RM615_03600 NZ_JAVRJW010000001.1 Protein Homology CDS 740124 740423 . - 0 ID=cds-WP_037573535.1;Parent=gene-RM615_RS03600;Dbxref=GenBank:WP_037573535.1;Name=WP_037573535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724387.1;locus_tag=RM615_RS03600;product=HesB/YadR/YfhF family protein;protein_id=WP_037573535.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 740507 741088 . - . ID=gene-RM615_RS03605;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=RM615_RS03605;old_locus_tag=RM615_03605 NZ_JAVRJW010000001.1 Protein Homology CDS 740507 741088 . - 0 ID=cds-WP_037573536.1;Parent=gene-RM615_RS03605;Dbxref=GenBank:WP_037573536.1;Name=WP_037573536.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=RM615_RS03605;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_037573536.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 741302 743296 . + . ID=gene-RM615_RS03610;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=RM615_RS03610;old_locus_tag=RM615_03610 NZ_JAVRJW010000001.1 Protein Homology CDS 741302 743296 . + 0 ID=cds-WP_105962800.1;Parent=gene-RM615_RS03610;Dbxref=GenBank:WP_105962800.1;Name=WP_105962800.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=RM615_RS03610;product=DNA topoisomerase IV subunit B;protein_id=WP_105962800.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 743296 745722 . + . ID=gene-RM615_RS03615;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=RM615_RS03615;old_locus_tag=RM615_03615 NZ_JAVRJW010000001.1 Protein Homology CDS 743296 745722 . + 0 ID=cds-WP_311540915.1;Parent=gene-RM615_RS03615;Dbxref=GenBank:WP_311540915.1;Name=WP_311540915.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=RM615_RS03615;product=DNA topoisomerase IV subunit A;protein_id=WP_311540915.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 745812 747281 . + . ID=gene-RM615_RS03620;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=RM615_RS03620;old_locus_tag=RM615_03620 NZ_JAVRJW010000001.1 Protein Homology CDS 745812 747281 . + 0 ID=cds-WP_037573545.1;Parent=gene-RM615_RS03620;Dbxref=GenBank:WP_037573545.1;Name=WP_037573545.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499882.1;locus_tag=RM615_RS03620;product=glutamine transporter AlsT;protein_id=WP_037573545.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 747445 748296 . + . ID=gene-RM615_RS03625;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=RM615_RS03625;old_locus_tag=RM615_03625 NZ_JAVRJW010000001.1 Protein Homology CDS 747445 748296 . + 0 ID=cds-WP_037573547.1;Parent=gene-RM615_RS03625;Dbxref=GenBank:WP_037573547.1;Name=WP_037573547.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=RM615_RS03625;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_037573547.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 748405 750447 . + . ID=gene-RM615_RS03630;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=RM615_RS03630;old_locus_tag=RM615_03630 NZ_JAVRJW010000001.1 Protein Homology CDS 748405 750447 . + 0 ID=cds-WP_037573549.1;Parent=gene-RM615_RS03630;Dbxref=GenBank:WP_037573549.1;Name=WP_037573549.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167733.1;locus_tag=RM615_RS03630;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_037573549.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 750657 751880 . + . ID=gene-RM615_RS03635;Name=RM615_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03635;old_locus_tag=RM615_03635 NZ_JAVRJW010000001.1 Protein Homology CDS 750657 751880 . + 0 ID=cds-WP_037573552.1;Parent=gene-RM615_RS03635;Dbxref=GenBank:WP_037573552.1;Name=WP_037573552.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499885.1;locus_tag=RM615_RS03635;product=AI-2E family transporter;protein_id=WP_037573552.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 752064 754583 . + . ID=gene-RM615_RS03640;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=RM615_RS03640;old_locus_tag=RM615_03640 NZ_JAVRJW010000001.1 Protein Homology CDS 752064 754583 . + 0 ID=cds-WP_103158875.1;Parent=gene-RM615_RS03640;Dbxref=GenBank:WP_103158875.1;Name=WP_103158875.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459190.1;locus_tag=RM615_RS03640;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_103158875.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 754776 755291 . - . ID=gene-RM615_RS03645;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM615_RS03645;old_locus_tag=RM615_03645 NZ_JAVRJW010000001.1 Protein Homology CDS 754776 755291 . - 0 ID=cds-WP_311540916.1;Parent=gene-RM615_RS03645;Dbxref=GenBank:WP_311540916.1;Name=WP_311540916.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497837.1;locus_tag=RM615_RS03645;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_311540916.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 755435 756400 . + . ID=gene-RM615_RS03650;Name=RM615_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03650;old_locus_tag=RM615_03650 NZ_JAVRJW010000001.1 Protein Homology CDS 755435 756400 . + 0 ID=cds-WP_037573559.1;Parent=gene-RM615_RS03650;Dbxref=GenBank:WP_037573559.1;Name=WP_037573559.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499888.1;locus_tag=RM615_RS03650;product=LCP family protein;protein_id=WP_037573559.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 756440 756625 . - . ID=gene-RM615_RS03655;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=RM615_RS03655;old_locus_tag=RM615_03655 NZ_JAVRJW010000001.1 Protein Homology CDS 756440 756625 . - 0 ID=cds-WP_037573561.1;Parent=gene-RM615_RS03655;Dbxref=GenBank:WP_037573561.1;Name=WP_037573561.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=RM615_RS03655;product=2-hydroxymuconate tautomerase;protein_id=WP_037573561.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 756768 757178 . + . ID=gene-RM615_RS03660;Name=RM615_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03660;old_locus_tag=RM615_03660 NZ_JAVRJW010000001.1 Protein Homology CDS 756768 757178 . + 0 ID=cds-WP_037573563.1;Parent=gene-RM615_RS03660;Dbxref=GenBank:WP_037573563.1;Name=WP_037573563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=RM615_RS03660;product=sporulation protein;protein_id=WP_037573563.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 757332 758594 . + . ID=gene-RM615_RS03665;Name=RM615_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03665;old_locus_tag=RM615_03665 NZ_JAVRJW010000001.1 Protein Homology CDS 757332 758594 . + 0 ID=cds-WP_105965277.1;Parent=gene-RM615_RS03665;Dbxref=GenBank:WP_105965277.1;Name=WP_105965277.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=RM615_RS03665;product=Y-family DNA polymerase;protein_id=WP_105965277.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 758727 759821 . - . ID=gene-RM615_RS03670;Name=RM615_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03670;old_locus_tag=RM615_03670 NZ_JAVRJW010000001.1 Protein Homology CDS 758727 759821 . - 0 ID=cds-WP_105996611.1;Parent=gene-RM615_RS03670;Dbxref=GenBank:WP_105996611.1;Name=WP_105996611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=RM615_RS03670;product=prephenate dehydrogenase;protein_id=WP_105996611.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 760336 761595 . + . ID=gene-RM615_RS03675;Name=RM615_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03675;old_locus_tag=RM615_03675 NZ_JAVRJW010000001.1 Protein Homology CDS 760336 761595 . + 0 ID=cds-WP_037573569.1;Parent=gene-RM615_RS03675;Dbxref=GenBank:WP_037573569.1;Name=WP_037573569.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468762.1;locus_tag=RM615_RS03675;product=aminoacyltransferase;protein_id=WP_037573569.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 761620 762879 . + . ID=gene-RM615_RS03680;Name=RM615_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03680;old_locus_tag=RM615_03680 NZ_JAVRJW010000001.1 Protein Homology CDS 761620 762879 . + 0 ID=cds-WP_103158868.1;Parent=gene-RM615_RS03680;Dbxref=GenBank:WP_103158868.1;Name=WP_103158868.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=RM615_RS03680;product=aminoacyltransferase;protein_id=WP_103158868.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 763414 763737 . - . ID=gene-RM615_RS03685;Name=RM615_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03685;old_locus_tag=RM615_03685 NZ_JAVRJW010000001.1 Protein Homology CDS 763414 763737 . - 0 ID=cds-WP_037573577.1;Parent=gene-RM615_RS03685;Dbxref=GenBank:WP_037573577.1;Name=WP_037573577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167722.1;locus_tag=RM615_RS03685;product=hypothetical protein;protein_id=WP_037573577.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 763868 765679 . + . ID=gene-RM615_RS03690;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM615_RS03690;old_locus_tag=RM615_03690 NZ_JAVRJW010000001.1 Protein Homology CDS 763868 765679 . + 0 ID=cds-WP_037573579.1;Parent=gene-RM615_RS03690;Dbxref=GenBank:WP_037573579.1;Name=WP_037573579.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507656.1;locus_tag=RM615_RS03690;product=oligoendopeptidase F;protein_id=WP_037573579.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 765823 766767 . + . ID=gene-RM615_RS03695;Name=RM615_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03695;old_locus_tag=RM615_03695 NZ_JAVRJW010000001.1 Protein Homology CDS 765823 766767 . + 0 ID=cds-WP_157946257.1;Parent=gene-RM615_RS03695;Dbxref=GenBank:WP_157946257.1;Name=WP_157946257.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:TIGR03168.1;locus_tag=RM615_RS03695;product=1-phosphofructokinase family hexose kinase;protein_id=WP_157946257.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 766824 767729 . - . ID=gene-RM615_RS03700;Name=RM615_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03700;old_locus_tag=RM615_03700 NZ_JAVRJW010000001.1 Protein Homology CDS 766824 767729 . - 0 ID=cds-WP_037573583.1;Parent=gene-RM615_RS03700;Dbxref=GenBank:WP_037573583.1;Name=WP_037573583.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167718.1;locus_tag=RM615_RS03700;product=CvfB family protein;protein_id=WP_037573583.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 767886 769493 . + . ID=gene-RM615_RS03705;Name=RM615_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03705;old_locus_tag=RM615_03705 NZ_JAVRJW010000001.1 Protein Homology CDS 767886 769493 . + 0 ID=cds-WP_037573587.1;Parent=gene-RM615_RS03705;Dbxref=GenBank:WP_037573587.1;Name=WP_037573587.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=RM615_RS03705;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_037573587.1;transl_table=11 NZ_JAVRJW010000001.1 cmsearch riboswitch 769655 769831 . + . ID=id-NZ_JAVRJW010000001.1:769655..769831;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000001.1 RefSeq gene 769950 770933 . + . ID=gene-RM615_RS03710;Name=RM615_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03710;old_locus_tag=RM615_03710 NZ_JAVRJW010000001.1 Protein Homology CDS 769950 770933 . + 0 ID=cds-WP_105996607.1;Parent=gene-RM615_RS03710;Dbxref=GenBank:WP_105996607.1;Name=WP_105996607.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase (NADP+) activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499922.1;locus_tag=RM615_RS03710;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_105996607.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 770955 771833 . + . ID=gene-RM615_RS03715;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=RM615_RS03715;old_locus_tag=RM615_03715 NZ_JAVRJW010000001.1 Protein Homology CDS 770955 771833 . + 0 ID=cds-WP_037573597.1;Parent=gene-RM615_RS03715;Dbxref=GenBank:WP_037573597.1;Name=WP_037573597.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303134.1;locus_tag=RM615_RS03715;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_037573597.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 771830 772552 . + . ID=gene-RM615_RS03720;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=RM615_RS03720;old_locus_tag=RM615_03720 NZ_JAVRJW010000001.1 Protein Homology CDS 771830 772552 . + 0 ID=cds-WP_103158861.1;Parent=gene-RM615_RS03720;Dbxref=GenBank:WP_103158861.1;Name=WP_103158861.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478208.1;locus_tag=RM615_RS03720;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_103158861.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 772570 773289 . + . ID=gene-RM615_RS03725;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=RM615_RS03725;old_locus_tag=RM615_03725 NZ_JAVRJW010000001.1 Protein Homology CDS 772570 773289 . + 0 ID=cds-WP_105965282.1;Parent=gene-RM615_RS03725;Dbxref=GenBank:WP_105965282.1;Name=WP_105965282.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499925.1;locus_tag=RM615_RS03725;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_105965282.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 773478 774626 . + . ID=gene-RM615_RS03730;Name=RM615_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03730;old_locus_tag=RM615_03730 NZ_JAVRJW010000001.1 Protein Homology CDS 773478 774626 . + 0 ID=cds-WP_311540588.1;Parent=gene-RM615_RS03730;Dbxref=GenBank:WP_311540588.1;Name=WP_311540588.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453219.1;locus_tag=RM615_RS03730;product=M20 metallopeptidase family protein;protein_id=WP_311540588.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 774629 775699 . + . ID=gene-RM615_RS03735;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM615_RS03735;old_locus_tag=RM615_03735 NZ_JAVRJW010000001.1 Protein Homology CDS 774629 775699 . + 0 ID=cds-WP_103158858.1;Parent=gene-RM615_RS03735;Dbxref=GenBank:WP_103158858.1;Name=WP_103158858.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499927.1;locus_tag=RM615_RS03735;product=alanine racemase;protein_id=WP_103158858.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 775696 776961 . + . ID=gene-RM615_RS03740;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=RM615_RS03740;old_locus_tag=RM615_03740 NZ_JAVRJW010000001.1 Protein Homology CDS 775696 776961 . + 0 ID=cds-WP_103158857.1;Parent=gene-RM615_RS03740;Dbxref=GenBank:WP_103158857.1;Name=WP_103158857.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365009.1;locus_tag=RM615_RS03740;product=diaminopimelate decarboxylase;protein_id=WP_103158857.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 777215 777415 . - . ID=gene-RM615_RS03745;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=RM615_RS03745;old_locus_tag=RM615_03745 NZ_JAVRJW010000001.1 Protein Homology CDS 777215 777415 . - 0 ID=cds-WP_001831260.1;Parent=gene-RM615_RS03745;Dbxref=GenBank:WP_001831260.1;Name=WP_001831260.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=RM615_RS03745;product=cold shock protein CspA;protein_id=WP_001831260.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 777594 777902 . - . ID=gene-RM615_RS03750;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=RM615_RS03750;old_locus_tag=RM615_03750 NZ_JAVRJW010000001.1 Protein Homology CDS 777594 777902 . - 0 ID=cds-WP_037573611.1;Parent=gene-RM615_RS03750;Dbxref=GenBank:WP_037573611.1;Name=WP_037573611.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=RM615_RS03750;product=regulatory protein MsaA;protein_id=WP_037573611.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 778238 778507 . + . ID=gene-RM615_RS03755;Name=RM615_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03755;old_locus_tag=RM615_03755 NZ_JAVRJW010000001.1 Protein Homology CDS 778238 778507 . + 0 ID=cds-WP_037573614.1;Parent=gene-RM615_RS03755;Dbxref=GenBank:WP_037573614.1;Name=WP_037573614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480918.1;locus_tag=RM615_RS03755;product=acylphosphatase;protein_id=WP_037573614.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 778527 779162 . + . ID=gene-RM615_RS03760;Name=RM615_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03760;old_locus_tag=RM615_03760 NZ_JAVRJW010000001.1 Protein Homology CDS 778527 779162 . + 0 ID=cds-WP_037573617.1;Parent=gene-RM615_RS03760;Dbxref=GenBank:WP_037573617.1;Name=WP_037573617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425055.1;locus_tag=RM615_RS03760;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_037573617.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 779159 780352 . + . ID=gene-RM615_RS03765;Name=RM615_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03765;old_locus_tag=RM615_03765 NZ_JAVRJW010000001.1 Protein Homology CDS 779159 780352 . + 0 ID=cds-WP_037573619.1;Parent=gene-RM615_RS03765;Dbxref=GenBank:WP_037573619.1;Name=WP_037573619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499935.1;locus_tag=RM615_RS03765;product=toxic anion resistance protein;protein_id=WP_037573619.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 780489 781835 . - . ID=gene-RM615_RS03770;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=RM615_RS03770;old_locus_tag=RM615_03770 NZ_JAVRJW010000001.1 Protein Homology CDS 780489 781835 . - 0 ID=cds-WP_037573621.1;Parent=gene-RM615_RS03770;Dbxref=GenBank:WP_037573621.1;Name=WP_037573621.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=RM615_RS03770;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_037573621.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 781956 783845 . - . ID=gene-RM615_RS03775;Name=RM615_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03775;old_locus_tag=RM615_03775 NZ_JAVRJW010000001.1 Protein Homology CDS 781956 783845 . - 0 ID=cds-WP_037573623.1;Parent=gene-RM615_RS03775;Dbxref=GenBank:WP_037573623.1;Name=WP_037573623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275795.1;locus_tag=RM615_RS03775;product=vWA domain-containing protein;protein_id=WP_037573623.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 783857 784654 . - . ID=gene-RM615_RS03780;Name=RM615_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03780;old_locus_tag=RM615_03780 NZ_JAVRJW010000001.1 Protein Homology CDS 783857 784654 . - 0 ID=cds-WP_229717277.1;Parent=gene-RM615_RS03780;Dbxref=GenBank:WP_229717277.1;Name=WP_229717277.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=RM615_RS03780;product=ATP-binding protein;protein_id=WP_229717277.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 784722 784928 . - . ID=gene-RM615_RS03785;Name=RM615_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03785;old_locus_tag=RM615_03785 NZ_JAVRJW010000001.1 Protein Homology CDS 784722 784928 . - 0 ID=cds-WP_037573629.1;Parent=gene-RM615_RS03785;Dbxref=GenBank:WP_037573629.1;Name=WP_037573629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=RM615_RS03785;product=DUF6501 family protein;protein_id=WP_037573629.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 784945 785757 . - . ID=gene-RM615_RS03790;Name=RM615_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03790;old_locus_tag=RM615_03790 NZ_JAVRJW010000001.1 Protein Homology CDS 784945 785757 . - 0 ID=cds-WP_311540917.1;Parent=gene-RM615_RS03790;Dbxref=GenBank:WP_311540917.1;Name=WP_311540917.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275792.1;locus_tag=RM615_RS03790;product=VOC family protein;protein_id=WP_311540917.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 786051 787307 . - . ID=gene-RM615_RS03795;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=RM615_RS03795;old_locus_tag=RM615_03795 NZ_JAVRJW010000001.1 Protein Homology CDS 786051 787307 . - 0 ID=cds-WP_037573635.1;Parent=gene-RM615_RS03795;Dbxref=GenBank:WP_037573635.1;Name=WP_037573635.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499943.1;locus_tag=RM615_RS03795;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_037573635.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 787321 790110 . - . ID=gene-RM615_RS03800;Name=RM615_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03800;old_locus_tag=RM615_03800 NZ_JAVRJW010000001.1 Protein Homology CDS 787321 790110 . - 0 ID=cds-WP_311540918.1;Parent=gene-RM615_RS03800;Dbxref=GenBank:WP_311540918.1;Name=WP_311540918.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=RM615_RS03800;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_311540918.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 790201 791571 . - . ID=gene-RM615_RS03805;Name=RM615_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03805;old_locus_tag=RM615_03805 NZ_JAVRJW010000001.1 Protein Homology CDS 790201 791571 . - 0 ID=cds-WP_103159586.1;Parent=gene-RM615_RS03805;Dbxref=GenBank:WP_103159586.1;Name=WP_103159586.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459152.1;locus_tag=RM615_RS03805;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_103159586.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 791568 792245 . - . ID=gene-RM615_RS03810;Name=RM615_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03810;old_locus_tag=RM615_03810 NZ_JAVRJW010000001.1 Protein Homology CDS 791568 792245 . - 0 ID=cds-WP_037573645.1;Parent=gene-RM615_RS03810;Dbxref=GenBank:WP_037573645.1;Name=WP_037573645.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=RM615_RS03810;product=response regulator transcription factor;protein_id=WP_037573645.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 792601 793215 . - . ID=gene-RM615_RS03815;Name=RM615_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03815;old_locus_tag=RM615_03815 NZ_JAVRJW010000001.1 Protein Homology CDS 792601 793215 . - 0 ID=cds-WP_037573648.1;Parent=gene-RM615_RS03815;Dbxref=GenBank:WP_037573648.1;Name=WP_037573648.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425067.1;locus_tag=RM615_RS03815;product=phosphatase PAP2 family protein;protein_id=WP_037573648.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 793230 794300 . - . ID=gene-RM615_RS03820;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=RM615_RS03820;old_locus_tag=RM615_03820 NZ_JAVRJW010000001.1 Protein Homology CDS 793230 794300 . - 0 ID=cds-WP_037573650.1;Parent=gene-RM615_RS03820;Dbxref=GenBank:WP_037573650.1;Name=WP_037573650.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425068.1;locus_tag=RM615_RS03820;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_037573650.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 794310 794819 . - . ID=gene-RM615_RS03825;Name=RM615_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03825;old_locus_tag=RM615_03825 NZ_JAVRJW010000001.1 Protein Homology CDS 794310 794819 . - 0 ID=cds-WP_311540932.1;Parent=gene-RM615_RS03825;Dbxref=GenBank:WP_311540932.1;Name=WP_311540932.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729121.1;locus_tag=RM615_RS03825;product=GNAT family N-acetyltransferase;protein_id=WP_311540932.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 794819 796192 . - . ID=gene-RM615_RS03830;Name=RM615_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03830;old_locus_tag=RM615_03830 NZ_JAVRJW010000001.1 Protein Homology CDS 794819 796192 . - 0 ID=cds-WP_232160219.1;Parent=gene-RM615_RS03830;Dbxref=GenBank:WP_232160219.1;Name=WP_232160219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425070.1;locus_tag=RM615_RS03830;product=S41 family peptidase;protein_id=WP_232160219.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 796406 796627 . - . ID=gene-RM615_RS03835;Name=RM615_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03835;old_locus_tag=RM615_03835 NZ_JAVRJW010000001.1 Protein Homology CDS 796406 796627 . - 0 ID=cds-WP_103159582.1;Parent=gene-RM615_RS03835;Dbxref=GenBank:WP_103159582.1;Name=WP_103159582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=RM615_RS03835;product=YozE family protein;protein_id=WP_103159582.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 796627 797127 . - . ID=gene-RM615_RS03840;Name=RM615_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03840;old_locus_tag=RM615_03840 NZ_JAVRJW010000001.1 Protein Homology CDS 796627 797127 . - 0 ID=cds-WP_037573659.1;Parent=gene-RM615_RS03840;Dbxref=GenBank:WP_037573659.1;Name=WP_037573659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=RM615_RS03840;product=PTS sugar transporter subunit IIA;protein_id=WP_037573659.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 797142 797570 . - . ID=gene-RM615_RS03845;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=RM615_RS03845;old_locus_tag=RM615_03845 NZ_JAVRJW010000001.1 Protein Homology CDS 797142 797570 . - 0 ID=cds-WP_037573662.1;Parent=gene-RM615_RS03845;Dbxref=GenBank:WP_037573662.1;Name=WP_037573662.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=RM615_RS03845;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_037573662.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 797563 798090 . - . ID=gene-RM615_RS03850;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM615_RS03850;old_locus_tag=RM615_03850 NZ_JAVRJW010000001.1 Protein Homology CDS 797563 798090 . - 0 ID=cds-WP_037573665.1;Parent=gene-RM615_RS03850;Dbxref=GenBank:WP_037573665.1;Name=WP_037573665.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453252.1;locus_tag=RM615_RS03850;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_037573665.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 798109 798954 . - . ID=gene-RM615_RS03855;Name=RM615_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03855;old_locus_tag=RM615_03855 NZ_JAVRJW010000001.1 Protein Homology CDS 798109 798954 . - 0 ID=cds-WP_311540919.1;Parent=gene-RM615_RS03855;Dbxref=GenBank:WP_311540919.1;Name=WP_311540919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=RM615_RS03855;product=fatty acid kinase binding subunit FakB;protein_id=WP_311540919.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 798972 799448 . - . ID=gene-RM615_RS03860;Name=RM615_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03860;old_locus_tag=RM615_03860 NZ_JAVRJW010000001.1 Protein Homology CDS 798972 799448 . - 0 ID=cds-WP_311540920.1;Parent=gene-RM615_RS03860;Dbxref=GenBank:WP_311540920.1;Name=WP_311540920.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=RM615_RS03860;product=dihydrofolate reductase;protein_id=WP_311540920.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 799510 800463 . - . ID=gene-RM615_RS03865;Name=RM615_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03865;old_locus_tag=RM615_03865 NZ_JAVRJW010000001.1 Protein Homology CDS 799510 800463 . - 0 ID=cds-WP_103159447.1;Parent=gene-RM615_RS03865;Dbxref=GenBank:WP_103159447.1;Name=WP_103159447.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=RM615_RS03865;product=thymidylate synthase;protein_id=WP_103159447.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 800677 801117 . - . ID=gene-RM615_RS03870;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=RM615_RS03870;old_locus_tag=RM615_03870 NZ_JAVRJW010000001.1 Protein Homology CDS 800677 801117 . - 0 ID=cds-WP_037573677.1;Parent=gene-RM615_RS03870;Dbxref=GenBank:WP_037573677.1;Name=WP_037573677.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=RM615_RS03870;product=bacilliredoxin BrxA;protein_id=WP_037573677.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 801136 802254 . - . ID=gene-RM615_RS03875;Name=RM615_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03875;old_locus_tag=RM615_03875 NZ_JAVRJW010000001.1 Protein Homology CDS 801136 802254 . - 0 ID=cds-WP_037573680.1;Parent=gene-RM615_RS03875;Dbxref=GenBank:WP_037573680.1;Name=WP_037573680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468951.1;locus_tag=RM615_RS03875;product=virulence factor;protein_id=WP_037573680.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 802265 802492 . - . ID=gene-RM615_RS03880;Name=RM615_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03880;old_locus_tag=RM615_03880 NZ_JAVRJW010000001.1 Protein Homology CDS 802265 802492 . - 0 ID=cds-WP_051604958.1;Parent=gene-RM615_RS03880;Dbxref=GenBank:WP_051604958.1;Name=WP_051604958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=RM615_RS03880;product=zinc-finger domain-containing protein;protein_id=WP_051604958.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 802700 803413 . + . ID=gene-RM615_RS03885;Name=RM615_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03885;old_locus_tag=RM615_03885 NZ_JAVRJW010000001.1 Protein Homology CDS 802700 803413 . + 0 ID=cds-WP_103159448.1;Parent=gene-RM615_RS03885;Dbxref=GenBank:WP_103159448.1;Name=WP_103159448.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=RM615_RS03885;product=queuosine precursor transporter;protein_id=WP_103159448.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 803603 804028 . + . ID=gene-RM615_RS03890;Name=RM615_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03890;old_locus_tag=RM615_03890 NZ_JAVRJW010000001.1 Protein Homology CDS 803603 804028 . + 0 ID=cds-WP_103159449.1;Parent=gene-RM615_RS03890;Dbxref=GenBank:WP_103159449.1;Name=WP_103159449.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062934.1;locus_tag=RM615_RS03890;product=ribonuclease HI family protein;protein_id=WP_103159449.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 804057 804944 . - . ID=gene-RM615_RS03895;Name=RM615_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03895;old_locus_tag=RM615_03895 NZ_JAVRJW010000001.1 Protein Homology CDS 804057 804944 . - 0 ID=cds-WP_103159450.1;Parent=gene-RM615_RS03895;Dbxref=GenBank:WP_103159450.1;Name=WP_103159450.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835246.1;locus_tag=RM615_RS03895;product=5'-3' exonuclease;protein_id=WP_103159450.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 804941 808402 . - . ID=gene-RM615_RS03900;Name=RM615_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03900;old_locus_tag=RM615_03900 NZ_JAVRJW010000001.1 Protein Homology CDS 804941 808402 . - 0 ID=cds-WP_311540921.1;Parent=gene-RM615_RS03900;Dbxref=GenBank:WP_311540921.1;Name=WP_311540921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=RM615_RS03900;product=dynamin family protein;protein_id=WP_311540921.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 808555 809469 . - . ID=gene-RM615_RS03905;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=RM615_RS03905;old_locus_tag=RM615_03905 NZ_JAVRJW010000001.1 Protein Homology CDS 808555 809469 . - 0 ID=cds-WP_105996597.1;Parent=gene-RM615_RS03905;Dbxref=GenBank:WP_105996597.1;Name=WP_105996597.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425084.1;locus_tag=RM615_RS03905;product=EamA family transporter RarD;protein_id=WP_105996597.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 809521 810645 . - . ID=gene-RM615_RS03910;Name=RM615_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03910;old_locus_tag=RM615_03910 NZ_JAVRJW010000001.1 Protein Homology CDS 809521 810645 . - 0 ID=cds-WP_037573700.1;Parent=gene-RM615_RS03910;Dbxref=GenBank:WP_037573700.1;Name=WP_037573700.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425085.1;locus_tag=RM615_RS03910;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_037573700.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 810843 811224 . - . ID=gene-RM615_RS03915;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=RM615_RS03915;old_locus_tag=RM615_03915 NZ_JAVRJW010000001.1 cmsearch RNase_P_RNA 810843 811224 . - . ID=rna-RM615_RS03915;Parent=gene-RM615_RS03915;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS03915;product=RNase P RNA component class B NZ_JAVRJW010000001.1 cmsearch exon 810843 811224 . - . ID=exon-RM615_RS03915-1;Parent=rna-RM615_RS03915;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS03915;product=RNase P RNA component class B NZ_JAVRJW010000001.1 RefSeq gene 811267 811602 . - . ID=gene-RM615_RS03920;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=RM615_RS03920;old_locus_tag=RM615_03920 NZ_JAVRJW010000001.1 Protein Homology CDS 811267 811602 . - 0 ID=cds-WP_037573703.1;Parent=gene-RM615_RS03920;Dbxref=GenBank:WP_037573703.1;Name=WP_037573703.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=RM615_RS03920;product=cell division regulator GpsB;protein_id=WP_037573703.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 811624 812181 . - . ID=gene-RM615_RS03925;Name=RM615_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03925;old_locus_tag=RM615_03925 NZ_JAVRJW010000001.1 Protein Homology CDS 811624 812181 . - 0 ID=cds-WP_037573706.1;Parent=gene-RM615_RS03925;Dbxref=GenBank:WP_037573706.1;Name=WP_037573706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480952.1;locus_tag=RM615_RS03925;product=SLOG family protein;protein_id=WP_037573706.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 812174 812506 . - . ID=gene-RM615_RS03930;Name=RM615_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03930;old_locus_tag=RM615_03930 NZ_JAVRJW010000001.1 Protein Homology CDS 812174 812506 . - 0 ID=cds-WP_105962816.1;Parent=gene-RM615_RS03930;Dbxref=GenBank:WP_105962816.1;Name=WP_105962816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020386.7;locus_tag=RM615_RS03930;product=DUF1798 family protein;protein_id=WP_105962816.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 813021 813647 . + . ID=gene-RM615_RS03935;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=RM615_RS03935;old_locus_tag=RM615_03935 NZ_JAVRJW010000001.1 Protein Homology CDS 813021 813647 . + 0 ID=cds-WP_037573711.1;Parent=gene-RM615_RS03935;Dbxref=GenBank:WP_037573711.1;Name=WP_037573711.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=RM615_RS03935;product=Holliday junction resolvase RecU;protein_id=WP_037573711.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 813644 815833 . + . ID=gene-RM615_RS03940;Name=RM615_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03940;old_locus_tag=RM615_03940 NZ_JAVRJW010000001.1 Protein Homology CDS 813644 815833 . + 0 ID=cds-WP_107367148.1;Parent=gene-RM615_RS03940;Dbxref=GenBank:WP_107367148.1;Name=WP_107367148.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165310.1;locus_tag=RM615_RS03940;product=transglycosylase domain-containing protein;protein_id=WP_107367148.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 815948 816316 . - . ID=gene-RM615_RS03945;Name=RM615_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03945;old_locus_tag=RM615_03945 NZ_JAVRJW010000001.1 Protein Homology CDS 815948 816316 . - 0 ID=cds-WP_037573717.1;Parent=gene-RM615_RS03945;Dbxref=GenBank:WP_037573717.1;Name=WP_037573717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425092.1;locus_tag=RM615_RS03945;product=YpoC family protein;protein_id=WP_037573717.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 816313 816987 . - . ID=gene-RM615_RS03950;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=RM615_RS03950;old_locus_tag=RM615_03950 NZ_JAVRJW010000001.1 Protein Homology CDS 816313 816987 . - 0 ID=cds-WP_103159454.1;Parent=gene-RM615_RS03950;Dbxref=GenBank:WP_103159454.1;Name=WP_103159454.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=RM615_RS03950;product=endonuclease III;protein_id=WP_103159454.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 816977 817669 . - . ID=gene-RM615_RS03955;Name=RM615_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03955;old_locus_tag=RM615_03955 NZ_JAVRJW010000001.1 Protein Homology CDS 816977 817669 . - 0 ID=cds-WP_037573723.1;Parent=gene-RM615_RS03955;Dbxref=GenBank:WP_037573723.1;Name=WP_037573723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=RM615_RS03955;product=DnaD domain-containing protein;protein_id=WP_037573723.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 817754 819046 . - . ID=gene-RM615_RS03960;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=RM615_RS03960;old_locus_tag=RM615_03960 NZ_JAVRJW010000001.1 Protein Homology CDS 817754 819046 . - 0 ID=cds-WP_037573726.1;Parent=gene-RM615_RS03960;Dbxref=GenBank:WP_037573726.1;Name=WP_037573726.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=RM615_RS03960;product=asparagine--tRNA ligase;protein_id=WP_037573726.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 819141 821825 . - . ID=gene-RM615_RS03965;Name=RM615_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03965;old_locus_tag=RM615_03965 NZ_JAVRJW010000001.1 Protein Homology CDS 819141 821825 . - 0 ID=cds-WP_037573728.1;Parent=gene-RM615_RS03965;Dbxref=GenBank:WP_037573728.1;Name=WP_037573728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364995.1;locus_tag=RM615_RS03965;product=ATP-dependent DNA helicase DinG%2C 3'-5' exoribonuclease type;protein_id=WP_037573728.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 821845 822816 . - . ID=gene-RM615_RS03970;Name=RM615_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03970;old_locus_tag=RM615_03970 NZ_JAVRJW010000001.1 Protein Homology CDS 821845 822816 . - 0 ID=cds-WP_103159457.1;Parent=gene-RM615_RS03970;Dbxref=GenBank:WP_103159457.1;Name=WP_103159457.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=RM615_RS03970;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_103159457.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 822803 824005 . - . ID=gene-RM615_RS03975;Name=RM615_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03975;old_locus_tag=RM615_03975 NZ_JAVRJW010000001.1 Protein Homology CDS 822803 824005 . - 0 ID=cds-WP_037573734.1;Parent=gene-RM615_RS03975;Dbxref=GenBank:WP_037573734.1;Name=WP_037573734.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361529.1;locus_tag=RM615_RS03975;product=CCA tRNA nucleotidyltransferase;protein_id=WP_037573734.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 823998 825134 . - . ID=gene-RM615_RS03980;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=RM615_RS03980;old_locus_tag=RM615_03980 NZ_JAVRJW010000001.1 Protein Homology CDS 823998 825134 . - 0 ID=cds-WP_103159459.1;Parent=gene-RM615_RS03980;Dbxref=GenBank:WP_103159459.1;Name=WP_103159459.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383771.1;locus_tag=RM615_RS03980;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_103159459.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 825151 825471 . - . ID=gene-RM615_RS03985;Name=RM615_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03985;old_locus_tag=RM615_03985 NZ_JAVRJW010000001.1 Protein Homology CDS 825151 825471 . - 0 ID=cds-WP_037573741.1;Parent=gene-RM615_RS03985;Dbxref=GenBank:WP_037573741.1;Name=WP_037573741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507577.1;locus_tag=RM615_RS03985;product=nucleotide pyrophosphohydrolase;protein_id=WP_037573741.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 825617 826312 . - . ID=gene-RM615_RS03990;Name=RM615_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03990;old_locus_tag=RM615_03990 NZ_JAVRJW010000001.1 Protein Homology CDS 825617 826312 . - 0 ID=cds-WP_037573744.1;Parent=gene-RM615_RS03990;Dbxref=GenBank:WP_037573744.1;Name=WP_037573744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468925.1;locus_tag=RM615_RS03990;product=zinc metallopeptidase;protein_id=WP_037573744.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 826349 826951 . - . ID=gene-RM615_RS03995;Name=RM615_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS03995;old_locus_tag=RM615_03995 NZ_JAVRJW010000001.1 Protein Homology CDS 826349 826951 . - 0 ID=cds-WP_311539148.1;Parent=gene-RM615_RS03995;Dbxref=GenBank:WP_311539148.1;Name=WP_311539148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507575.1;locus_tag=RM615_RS03995;product=DUF1405 domain-containing protein;protein_id=WP_311539148.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 826956 827516 . - . ID=gene-RM615_RS04000;Name=RM615_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04000;old_locus_tag=RM615_04000 NZ_JAVRJW010000001.1 Protein Homology CDS 826956 827516 . - 0 ID=cds-WP_107366171.1;Parent=gene-RM615_RS04000;Dbxref=GenBank:WP_107366171.1;Name=WP_107366171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020439.7;locus_tag=RM615_RS04000;product=YpiB family protein;protein_id=WP_107366171.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 827528 828769 . - . ID=gene-RM615_RS04005;Name=RM615_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04005;old_locus_tag=RM615_04005 NZ_JAVRJW010000001.1 Protein Homology CDS 827528 828769 . - 0 ID=cds-WP_103159463.1;Parent=gene-RM615_RS04005;Dbxref=GenBank:WP_103159463.1;Name=WP_103159463.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=RM615_RS04005;product=tetratricopeptide repeat protein;protein_id=WP_103159463.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 828771 830060 . - . ID=gene-RM615_RS04010;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=RM615_RS04010;old_locus_tag=RM615_04010 NZ_JAVRJW010000001.1 Protein Homology CDS 828771 830060 . - 0 ID=cds-WP_107360473.1;Parent=gene-RM615_RS04010;Dbxref=GenBank:WP_107360473.1;Name=WP_107360473.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=RM615_RS04010;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_107360473.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 830061 831128 . - . ID=gene-RM615_RS04015;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=RM615_RS04015;old_locus_tag=RM615_04015 NZ_JAVRJW010000001.1 Protein Homology CDS 830061 831128 . - 0 ID=cds-WP_107363873.1;Parent=gene-RM615_RS04015;Dbxref=GenBank:WP_107363873.1;Name=WP_107363873.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=RM615_RS04015;product=3-dehydroquinate synthase;protein_id=WP_107363873.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 831141 832307 . - . ID=gene-RM615_RS04020;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=RM615_RS04020;old_locus_tag=RM615_04020 NZ_JAVRJW010000001.1 Protein Homology CDS 831141 832307 . - 0 ID=cds-WP_103159464.1;Parent=gene-RM615_RS04020;Dbxref=GenBank:WP_103159464.1;Name=WP_103159464.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=RM615_RS04020;product=chorismate synthase;protein_id=WP_103159464.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 832525 832974 . - . ID=gene-RM615_RS04025;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=RM615_RS04025;old_locus_tag=RM615_04025 NZ_JAVRJW010000001.1 Protein Homology CDS 832525 832974 . - 0 ID=cds-WP_103159465.1;Parent=gene-RM615_RS04025;Dbxref=GenBank:WP_103159465.1;Name=WP_103159465.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463054.1;locus_tag=RM615_RS04025;product=nucleoside-diphosphate kinase;protein_id=WP_103159465.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 833056 834012 . - . ID=gene-RM615_RS04030;Name=RM615_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04030;old_locus_tag=RM615_04030 NZ_JAVRJW010000001.1 Protein Homology CDS 833056 834012 . - 0 ID=cds-WP_037573767.1;Parent=gene-RM615_RS04030;Dbxref=GenBank:WP_037573767.1;Name=WP_037573767.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=RM615_RS04030;product=polyprenyl synthetase family protein;protein_id=WP_037573767.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 834028 834738 . - . ID=gene-RM615_RS04035;Name=RM615_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04035;old_locus_tag=RM615_04035 NZ_JAVRJW010000001.1 Protein Homology CDS 834028 834738 . - 0 ID=cds-WP_037573770.1;Parent=gene-RM615_RS04035;Dbxref=GenBank:WP_037573770.1;Name=WP_037573770.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480974.1;locus_tag=RM615_RS04035;product=demethylmenaquinone methyltransferase;protein_id=WP_037573770.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 834731 835318 . - . ID=gene-RM615_RS04040;Name=RM615_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04040;old_locus_tag=RM615_04040 NZ_JAVRJW010000001.1 Protein Homology CDS 834731 835318 . - 0 ID=cds-WP_103159467.1;Parent=gene-RM615_RS04040;Dbxref=GenBank:WP_103159467.1;Name=WP_103159467.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: protein motif:HMM:NF046766.4;locus_tag=RM615_RS04040;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_103159467.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 835606 835878 . - . ID=gene-RM615_RS04045;Name=hbs;gbkey=Gene;gene=hbs;gene_biotype=protein_coding;gene_synonym=hbsU,hupA;locus_tag=RM615_RS04045;old_locus_tag=RM615_04045 NZ_JAVRJW010000001.1 Protein Homology CDS 835606 835878 . - 0 ID=cds-WP_167709386.1;Parent=gene-RM615_RS04045;Dbxref=GenBank:WP_167709386.1;Name=WP_167709386.1;Ontology_term=GO:0006270,GO:0030261,GO:0003677,GO:0030527,GO:0042802;gbkey=CDS;gene=hbs;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA,identical protein binding|0042802||IEA;go_process=DNA replication initiation|0006270||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=RM615_RS04045;product=non-specific DNA-binding protein Hbs;protein_id=WP_167709386.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 836166 837164 . - . ID=gene-RM615_RS04050;Name=RM615_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04050;old_locus_tag=RM615_04050 NZ_JAVRJW010000001.1 Protein Homology CDS 836166 837164 . - 0 ID=cds-WP_037573772.1;Parent=gene-RM615_RS04050;Dbxref=GenBank:WP_037573772.1;Name=WP_037573772.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=RM615_RS04050;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_037573772.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 837181 838491 . - . ID=gene-RM615_RS04055;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=RM615_RS04055;old_locus_tag=RM615_04055 NZ_JAVRJW010000001.1 Protein Homology CDS 837181 838491 . - 0 ID=cds-WP_037573775.1;Parent=gene-RM615_RS04055;Dbxref=GenBank:WP_037573775.1;Name=WP_037573775.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=RM615_RS04055;product=ribosome biogenesis GTPase Der;protein_id=WP_037573775.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 838801 839985 . - . ID=gene-RM615_RS04060;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=RM615_RS04060;old_locus_tag=RM615_04060 NZ_JAVRJW010000001.1 Protein Homology CDS 838801 839985 . - 0 ID=cds-WP_037573779.1;Parent=gene-RM615_RS04060;Dbxref=GenBank:WP_037573779.1;Name=WP_037573779.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382440.1;locus_tag=RM615_RS04060;product=30S ribosomal protein S1;protein_id=WP_037573779.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 840217 840888 . - . ID=gene-RM615_RS04065;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=RM615_RS04065;old_locus_tag=RM615_04065 NZ_JAVRJW010000001.1 Protein Homology CDS 840217 840888 . - 0 ID=cds-WP_107398582.1;Parent=gene-RM615_RS04065;Dbxref=GenBank:WP_107398582.1;Name=WP_107398582.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451130.1;locus_tag=RM615_RS04065;product=(d)CMP kinase;protein_id=WP_107398582.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 840961 841929 . + . ID=gene-RM615_RS04070;Name=RM615_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04070;old_locus_tag=RM615_04070 NZ_JAVRJW010000001.1 Protein Homology CDS 840961 841929 . + 0 ID=cds-WP_105962821.1;Parent=gene-RM615_RS04070;Dbxref=GenBank:WP_105962821.1;Name=WP_105962821.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=obsolete asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=RM615_RS04070;product=asparaginase;protein_id=WP_105962821.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 842104 843090 . - . ID=gene-RM615_RS04075;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=RM615_RS04075;old_locus_tag=RM615_04075 NZ_JAVRJW010000001.1 Protein Homology CDS 842104 843090 . - 0 ID=cds-WP_103159469.1;Parent=gene-RM615_RS04075;Dbxref=GenBank:WP_103159469.1;Name=WP_103159469.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=RM615_RS04075;product=bacillithiol disulfide reductase YpdA;protein_id=WP_103159469.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 843366 845255 . - . ID=gene-RM615_RS04080;Name=RM615_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04080;old_locus_tag=RM615_04080 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 843366 845255 . - 0 ID=cds-WP_165806109.1;Parent=gene-RM615_RS04080;Dbxref=GenBank:WP_165806109.1;Name=WP_165806109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS04080;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_165806109.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 845437 846813 . - . ID=gene-RM615_RS04085;Name=RM615_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04085;old_locus_tag=RM615_04085 NZ_JAVRJW010000001.1 Protein Homology CDS 845437 846813 . - 0 ID=cds-WP_103159471.1;Parent=gene-RM615_RS04085;Dbxref=GenBank:WP_103159471.1;Name=WP_103159471.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472147.1;locus_tag=RM615_RS04085;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_103159471.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 846806 847756 . - . ID=gene-RM615_RS04090;Name=RM615_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04090;old_locus_tag=RM615_04090 NZ_JAVRJW010000001.1 Protein Homology CDS 846806 847756 . - 0 ID=cds-WP_037573794.1;Parent=gene-RM615_RS04090;Dbxref=GenBank:WP_037573794.1;Name=WP_037573794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025846.7;locus_tag=RM615_RS04090;product=helix-turn-helix domain-containing protein;protein_id=WP_037573794.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 847862 848110 . + . ID=gene-RM615_RS04095;Name=RM615_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04095;old_locus_tag=RM615_04095 NZ_JAVRJW010000001.1 Protein Homology CDS 847862 848110 . + 0 ID=cds-WP_037573797.1;Parent=gene-RM615_RS04095;Dbxref=GenBank:WP_037573797.1;Name=WP_037573797.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=RM615_RS04095;product=ferredoxin;protein_id=WP_037573797.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 848184 848738 . - . ID=gene-RM615_RS04100;Name=RM615_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04100;old_locus_tag=RM615_04100 NZ_JAVRJW010000001.1 Protein Homology CDS 848184 848738 . - 0 ID=cds-WP_037573800.1;Parent=gene-RM615_RS04100;Dbxref=GenBank:WP_037573800.1;Name=WP_037573800.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637951.1;locus_tag=RM615_RS04100;product=ECF transporter S component;protein_id=WP_037573800.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 849066 850799 . - . ID=gene-RM615_RS04105;Name=RM615_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04105;old_locus_tag=RM615_04105 NZ_JAVRJW010000001.1 Protein Homology CDS 849066 850799 . - 0 ID=cds-WP_037573805.1;Parent=gene-RM615_RS04105;Dbxref=GenBank:WP_037573805.1;Name=WP_037573805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=RM615_RS04105;product=ATP-binding protein;protein_id=WP_037573805.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 850783 851508 . - . ID=gene-RM615_RS04110;Name=RM615_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04110;old_locus_tag=RM615_04110 NZ_JAVRJW010000001.1 Protein Homology CDS 850783 851508 . - 0 ID=cds-WP_037573808.1;Parent=gene-RM615_RS04110;Dbxref=GenBank:WP_037573808.1;Name=WP_037573808.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483235.1;locus_tag=RM615_RS04110;product=response regulator transcription factor;protein_id=WP_037573808.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 851680 852423 . - . ID=gene-RM615_RS04115;Name=RM615_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04115;old_locus_tag=RM615_04115 NZ_JAVRJW010000001.1 Protein Homology CDS 851680 852423 . - 0 ID=cds-WP_311539155.1;Parent=gene-RM615_RS04115;Dbxref=GenBank:WP_311539155.1;Name=WP_311539155.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382455.1;locus_tag=RM615_RS04115;product=pseudouridine synthase;protein_id=WP_311539155.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 852420 852965 . - . ID=gene-RM615_RS04120;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=RM615_RS04120;old_locus_tag=RM615_04120 NZ_JAVRJW010000001.1 Protein Homology CDS 852420 852965 . - 0 ID=cds-WP_311540922.1;Parent=gene-RM615_RS04120;Dbxref=GenBank:WP_311540922.1;Name=WP_311540922.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=RM615_RS04120;product=SMC-Scp complex subunit ScpB;protein_id=WP_311540922.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 852949 853683 . - . ID=gene-RM615_RS04125;Name=RM615_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04125;old_locus_tag=RM615_04125 NZ_JAVRJW010000001.1 Protein Homology CDS 852949 853683 . - 0 ID=cds-WP_311540923.1;Parent=gene-RM615_RS04125;Dbxref=GenBank:WP_311540923.1;Name=WP_311540923.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468357.1;locus_tag=RM615_RS04125;product=segregation and condensation protein A;protein_id=WP_311540923.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 853779 854282 . + . ID=gene-RM615_RS04130;Name=RM615_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04130;old_locus_tag=RM615_04130 NZ_JAVRJW010000001.1 Protein Homology CDS 853779 854282 . + 0 ID=cds-WP_311539156.1;Parent=gene-RM615_RS04130;Dbxref=GenBank:WP_311539156.1;Name=WP_311539156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507549.1;locus_tag=RM615_RS04130;product=DUF309 domain-containing protein;protein_id=WP_311539156.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 854304 855191 . - . ID=gene-RM615_RS04135;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=RM615_RS04135;old_locus_tag=RM615_04135 NZ_JAVRJW010000001.1 Protein Homology CDS 854304 855191 . - 0 ID=cds-WP_103159476.1;Parent=gene-RM615_RS04135;Dbxref=GenBank:WP_103159476.1;Name=WP_103159476.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425129.1;locus_tag=RM615_RS04135;product=site-specific tyrosine recombinase XerD;protein_id=WP_103159476.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 855231 855683 . - . ID=gene-RM615_RS04140;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=RM615_RS04140;old_locus_tag=RM615_04140 NZ_JAVRJW010000001.1 Protein Homology CDS 855231 855683 . - 0 ID=cds-WP_103159477.1;Parent=gene-RM615_RS04140;Dbxref=GenBank:WP_103159477.1;Name=WP_103159477.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016186688.1;locus_tag=RM615_RS04140;product=ferric iron uptake transcriptional regulator;protein_id=WP_103159477.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 855787 856329 . - . ID=gene-RM615_RS04145;Name=RM615_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04145;old_locus_tag=RM615_04145 NZ_JAVRJW010000001.1 Protein Homology CDS 855787 856329 . - 0 ID=cds-WP_103159478.1;Parent=gene-RM615_RS04145;Dbxref=GenBank:WP_103159478.1;Name=WP_103159478.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465769.1;locus_tag=RM615_RS04145;product=NUDIX hydrolase;protein_id=WP_103159478.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 856408 857316 . + . ID=gene-RM615_RS04150;Name=RM615_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04150;old_locus_tag=RM615_04150 NZ_JAVRJW010000001.1 Protein Homology CDS 856408 857316 . + 0 ID=cds-WP_103159479.1;Parent=gene-RM615_RS04150;Dbxref=GenBank:WP_103159479.1;Name=WP_103159479.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500109.1;locus_tag=RM615_RS04150;product=aldo/keto reductase;protein_id=WP_103159479.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 857645 858463 . + . ID=gene-RM615_RS04155;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=RM615_RS04155;old_locus_tag=RM615_04155 NZ_JAVRJW010000001.1 Protein Homology CDS 857645 858463 . + 0 ID=cds-WP_037573829.1;Parent=gene-RM615_RS04155;Dbxref=GenBank:WP_037573829.1;Name=WP_037573829.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468364.1;locus_tag=RM615_RS04155;product=pyrroline-5-carboxylate reductase;protein_id=WP_037573829.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 858552 859469 . - . ID=gene-RM615_RS04160;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=RM615_RS04160;old_locus_tag=RM615_04160 NZ_JAVRJW010000001.1 Protein Homology CDS 858552 859469 . - 0 ID=cds-WP_037573830.1;Parent=gene-RM615_RS04160;Dbxref=GenBank:WP_037573830.1;Name=WP_037573830.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483224.1;locus_tag=RM615_RS04160;product=ribonuclease Z;protein_id=WP_037573830.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 859630 861114 . + . ID=gene-RM615_RS04165;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=RM615_RS04165;old_locus_tag=RM615_04165 NZ_JAVRJW010000001.1 Protein Homology CDS 859630 861114 . + 0 ID=cds-WP_037573831.1;Parent=gene-RM615_RS04165;Dbxref=GenBank:WP_037573831.1;Name=WP_037573831.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382473.1;locus_tag=RM615_RS04165;product=glucose-6-phosphate dehydrogenase;protein_id=WP_037573831.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 861218 862075 . + . ID=gene-RM615_RS04170;Name=RM615_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04170;old_locus_tag=RM615_04170 NZ_JAVRJW010000001.1 Protein Homology CDS 861218 862075 . + 0 ID=cds-WP_037573832.1;Parent=gene-RM615_RS04170;Dbxref=GenBank:WP_037573832.1;Name=WP_037573832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511212.1;locus_tag=RM615_RS04170;product=AraC family transcriptional regulator;protein_id=WP_037573832.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 862214 863617 . - . ID=gene-RM615_RS04175;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=RM615_RS04175;old_locus_tag=RM615_04175 NZ_JAVRJW010000001.1 Protein Homology CDS 862214 863617 . - 0 ID=cds-WP_037573834.1;Parent=gene-RM615_RS04175;Dbxref=GenBank:WP_037573834.1;Name=WP_037573834.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=RM615_RS04175;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_037573834.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 863709 864821 . - . ID=gene-RM615_RS04180;Name=RM615_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04180;old_locus_tag=RM615_04180 NZ_JAVRJW010000001.1 Protein Homology CDS 863709 864821 . - 0 ID=cds-WP_311540924.1;Parent=gene-RM615_RS04180;Dbxref=GenBank:WP_311540924.1;Name=WP_311540924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425139.1;locus_tag=RM615_RS04180;product=tripeptidase T;protein_id=WP_311540924.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 864999 865100 . + . ID=gene-RM615_RS04185;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=RM615_RS04185;old_locus_tag=RM615_04185 NZ_JAVRJW010000001.1 Protein Homology CDS 864999 865100 . + 0 ID=cds-WP_150130324.1;Parent=gene-RM615_RS04185;Dbxref=GenBank:WP_150130324.1;Name=WP_150130324.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=RM615_RS04185;product=stressosome-associated protein Prli42;protein_id=WP_150130324.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 865152 866129 . - . ID=gene-RM615_RS04190;Name=RM615_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04190;old_locus_tag=RM615_04190 NZ_JAVRJW010000001.1 Protein Homology CDS 865152 866129 . - 0 ID=cds-WP_311540576.1;Parent=gene-RM615_RS04190;Dbxref=GenBank:WP_311540576.1;Name=WP_311540576.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=RM615_RS04190;product=aromatic acid exporter family protein;protein_id=WP_311540576.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 866141 866578 . - . ID=gene-RM615_RS04195;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=RM615_RS04195;old_locus_tag=RM615_04195 NZ_JAVRJW010000001.1 Protein Homology CDS 866141 866578 . - 0 ID=cds-WP_037573840.1;Parent=gene-RM615_RS04195;Dbxref=GenBank:WP_037573840.1;Name=WP_037573840.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=RM615_RS04195;product=bacilliredoxin BrxB;protein_id=WP_037573840.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 866643 867908 . - . ID=gene-RM615_RS04200;Name=RM615_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04200;old_locus_tag=RM615_04200 NZ_JAVRJW010000001.1 Protein Homology CDS 866643 867908 . - 0 ID=cds-WP_311540575.1;Parent=gene-RM615_RS04200;Dbxref=GenBank:WP_311540575.1;Name=WP_311540575.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=RM615_RS04200;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_311540575.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 867920 868903 . - . ID=gene-RM615_RS04205;Name=RM615_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04205;old_locus_tag=RM615_04205 NZ_JAVRJW010000001.1 Protein Homology CDS 867920 868903 . - 0 ID=cds-WP_037573844.1;Parent=gene-RM615_RS04205;Dbxref=GenBank:WP_037573844.1;Name=WP_037573844.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=RM615_RS04205;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_037573844.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 868896 869894 . - . ID=gene-RM615_RS04210;Name=RM615_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04210;old_locus_tag=RM615_04210 NZ_JAVRJW010000001.1 Protein Homology CDS 868896 869894 . - 0 ID=cds-WP_311540574.1;Parent=gene-RM615_RS04210;Dbxref=GenBank:WP_311540574.1;Name=WP_311540574.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=RM615_RS04210;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_311540574.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 869917 871335 . - . ID=gene-RM615_RS04215;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM615_RS04215;old_locus_tag=RM615_04215 NZ_JAVRJW010000001.1 Protein Homology CDS 869917 871335 . - 0 ID=cds-WP_037573847.1;Parent=gene-RM615_RS04215;Dbxref=GenBank:WP_037573847.1;Name=WP_037573847.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=RM615_RS04215;product=dihydrolipoyl dehydrogenase;protein_id=WP_037573847.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 871347 872252 . - . ID=gene-RM615_RS04220;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=RM615_RS04220;old_locus_tag=RM615_04220 NZ_JAVRJW010000001.1 Protein Homology CDS 871347 872252 . - 0 ID=cds-WP_311540925.1;Parent=gene-RM615_RS04220;Dbxref=GenBank:WP_311540925.1;Name=WP_311540925.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF002834.0;locus_tag=RM615_RS04220;product=butyrate kinase;protein_id=WP_311540925.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 872249 872404 . - . ID=gene-RM615_RS04225;Name=RM615_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04225;old_locus_tag=RM615_04225 NZ_JAVRJW010000001.1 GeneMarkS-2+ CDS 872249 872404 . - 0 ID=cds-WP_311539162.1;Parent=gene-RM615_RS04225;Dbxref=GenBank:WP_311539162.1;Name=WP_311539162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS04225;product=hypothetical protein;protein_id=WP_311539162.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 872460 873356 . - . ID=gene-RM615_RS04230;Name=RM615_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04230;old_locus_tag=RM615_04230 NZ_JAVRJW010000001.1 Protein Homology CDS 872460 873356 . - 0 ID=cds-WP_375712600.1;Parent=gene-RM615_RS04230;Dbxref=GenBank:WP_375712600.1;Name=WP_375712600.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724554.1;locus_tag=RM615_RS04230;product=phosphate acyltransferase;protein_id=WP_375712600.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 873371 875044 . - . ID=gene-RM615_RS04235;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=RM615_RS04235;old_locus_tag=RM615_04235 NZ_JAVRJW010000001.1 Protein Homology CDS 873371 875044 . - 0 ID=cds-WP_311540926.1;Parent=gene-RM615_RS04235;Dbxref=GenBank:WP_311540926.1;Name=WP_311540926.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468378.1;locus_tag=RM615_RS04235;product=DNA repair protein RecN;protein_id=WP_311540926.1;transl_table=11 NZ_JAVRJW010000001.1 RefSeq gene 875057 875479 . - . ID=gene-RM615_RS04240;Name=ahrC;end_range=875479,.;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=RM615_RS04240;old_locus_tag=RM615_04240;partial=true NZ_JAVRJW010000001.1 Protein Homology CDS 875057 875479 . - 0 ID=cds-WP_311540284.1;Parent=gene-RM615_RS04240;Dbxref=GenBank:WP_311540284.1;Name=WP_311540284.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;end_range=875479,.;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=RM615_RS04240;partial=true;product=transcriptional regulator AhrC/ArgR;protein_id=WP_311540284.1;transl_table=11 ##sequence-region NZ_JAVRJW010000020.1 1 1528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000020.1 RefSeq region 1 1528 . + . ID=NZ_JAVRJW010000020.1:1..1528;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000020.1 RefSeq gene 42 1528 . + . ID=gene-RM615_RS11115;Name=RM615_RS11115;end_range=1528,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM615_RS11115;old_locus_tag=RM615_11125;partial=true NZ_JAVRJW010000020.1 cmsearch rRNA 42 1528 . + . ID=rna-RM615_RS11115;Parent=gene-RM615_RS11115;Dbxref=RFAM:RF02541;end_range=1528,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS11115;partial=true;product=23S ribosomal RNA NZ_JAVRJW010000020.1 cmsearch exon 42 1528 . + . ID=exon-RM615_RS11115-1;Parent=rna-RM615_RS11115;Dbxref=RFAM:RF02541;end_range=1528,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS11115;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JAVRJW010000021.1 1 1498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000021.1 RefSeq region 1 1498 . + . ID=NZ_JAVRJW010000021.1:1..1498;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000021.1 RefSeq gene 1 1439 . + . ID=gene-RM615_RS11120;Name=RM615_RS11120;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM615_RS11120;old_locus_tag=RM615_11130;partial=true;start_range=.,1 NZ_JAVRJW010000021.1 cmsearch rRNA 1 1439 . + . ID=rna-RM615_RS11120;Parent=gene-RM615_RS11120;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS11120;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAVRJW010000021.1 cmsearch exon 1 1439 . + . ID=exon-RM615_RS11120-1;Parent=rna-RM615_RS11120;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS11120;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVRJW010000022.1 1 1017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000022.1 RefSeq region 1 1017 . + . ID=NZ_JAVRJW010000022.1:1..1017;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000022.1 RefSeq gene 1 632 . - . ID=gene-RM615_RS11125;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM615_RS11125;old_locus_tag=RM615_11135;partial=true;start_range=.,1 NZ_JAVRJW010000022.1 Protein Homology CDS 1 632 . - 0 ID=cds-WP_311541199.1;Parent=gene-RM615_RS11125;Dbxref=GenBank:WP_311541199.1;Name=WP_311541199.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM615_RS11125;partial=true;product=phosphopentomutase;protein_id=WP_311541199.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000022.1 RefSeq gene 668 1017 . - . ID=gene-RM615_RS11130;Name=deoC;end_range=1017,.;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM615_RS11130;old_locus_tag=RM615_11140;partial=true NZ_JAVRJW010000022.1 Protein Homology CDS 668 1017 . - 2 ID=cds-WP_311541200.1;Parent=gene-RM615_RS11130;Dbxref=GenBank:WP_311541200.1;Name=WP_311541200.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;end_range=1017,.;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM615_RS11130;partial=true;product=deoxyribose-phosphate aldolase;protein_id=WP_311541200.1;transl_table=11 ##sequence-region NZ_JAVRJW010000023.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000023.1 RefSeq region 1 685 . + . ID=NZ_JAVRJW010000023.1:1..685;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000023.1 RefSeq gene 1 685 . - . ID=gene-RM615_RS11135;Name=RM615_RS11135;end_range=685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11135;old_locus_tag=RM615_11145;partial=true;start_range=.,1 NZ_JAVRJW010000023.1 GeneMarkS-2+ CDS 1 685 . - 2 ID=cds-WP_311541201.1;Parent=gene-RM615_RS11135;Dbxref=GenBank:WP_311541201.1;Name=WP_311541201.1;end_range=685,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS11135;partial=true;product=hypothetical protein;protein_id=WP_311541201.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJW010000024.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000024.1 RefSeq region 1 514 . + . ID=NZ_JAVRJW010000024.1:1..514;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000024.1 RefSeq gene 1 455 . + . ID=gene-RM615_RS11140;Name=RM615_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11140;old_locus_tag=RM615_11150;partial=true;start_range=.,1 NZ_JAVRJW010000024.1 Protein Homology CDS 1 455 . + 2 ID=cds-WP_311541202.1;Parent=gene-RM615_RS11140;Dbxref=GenBank:WP_311541202.1;Name=WP_311541202.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM615_RS11140;partial=true;product=IS6-like element IS257 family transposase;protein_id=WP_311541202.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJW010000025.1 1 507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000025.1 RefSeq region 1 507 . + . ID=NZ_JAVRJW010000025.1:1..507;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000025.1 RefSeq pseudogene 1 507 . - . ID=gene-RM615_RS11145;Name=RM615_RS11145;end_range=507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11145;old_locus_tag=RM615_11155;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJW010000025.1 Protein Homology CDS 1 507 . - 0 ID=cds-RM615_RS11145;Parent=gene-RM615_RS11145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467566.1;locus_tag=RM615_RS11145;partial=true;product=clumping factor B;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVRJW010000002.1 1 297155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000002.1 RefSeq region 1 297155 . + . ID=NZ_JAVRJW010000002.1:1..297155;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000002.1 RefSeq gene 1 185 . - . ID=gene-RM615_RS04245;Name=RM615_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04245;old_locus_tag=RM615_04245;partial=true;start_range=.,1 NZ_JAVRJW010000002.1 Protein Homology CDS 1 185 . - 0 ID=cds-WP_511567707.1;Parent=gene-RM615_RS04245;Dbxref=GenBank:WP_511567707.1;Name=WP_511567707.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=RM615_RS04245;partial=true;product=arginine repressor;protein_id=WP_511567707.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 387 2276 . - . ID=gene-RM615_RS04250;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=RM615_RS04250;old_locus_tag=RM615_04250 NZ_JAVRJW010000002.1 Protein Homology CDS 387 2276 . - 0 ID=cds-WP_037573851.1;Parent=gene-RM615_RS04250;Dbxref=GenBank:WP_037573851.1;Name=WP_037573851.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010287828.1;locus_tag=RM615_RS04250;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_037573851.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 2312 3196 . - . ID=gene-RM615_RS04255;Name=RM615_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04255;old_locus_tag=RM615_04255 NZ_JAVRJW010000002.1 Protein Homology CDS 2312 3196 . - 0 ID=cds-WP_311540933.1;Parent=gene-RM615_RS04255;Dbxref=GenBank:WP_311540933.1;Name=WP_311540933.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364978.1;locus_tag=RM615_RS04255;product=polyprenyl synthetase family protein;protein_id=WP_311540933.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 3174 3398 . - . ID=gene-RM615_RS04260;Name=RM615_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04260;old_locus_tag=RM615_04260 NZ_JAVRJW010000002.1 Protein Homology CDS 3174 3398 . - 0 ID=cds-WP_037573854.1;Parent=gene-RM615_RS04260;Dbxref=GenBank:WP_037573854.1;Name=WP_037573854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=RM615_RS04260;product=exodeoxyribonuclease VII small subunit;protein_id=WP_037573854.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 3382 4728 . - . ID=gene-RM615_RS04265;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=RM615_RS04265;old_locus_tag=RM615_04265 NZ_JAVRJW010000002.1 Protein Homology CDS 3382 4728 . - 0 ID=cds-WP_311540569.1;Parent=gene-RM615_RS04265;Dbxref=GenBank:WP_311540569.1;Name=WP_311540569.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=RM615_RS04265;product=exodeoxyribonuclease VII large subunit;protein_id=WP_311540569.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 4737 5129 . - . ID=gene-RM615_RS04270;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=RM615_RS04270;old_locus_tag=RM615_04270 NZ_JAVRJW010000002.1 Protein Homology CDS 4737 5129 . - 0 ID=cds-WP_037573858.1;Parent=gene-RM615_RS04270;Dbxref=GenBank:WP_037573858.1;Name=WP_037573858.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=RM615_RS04270;product=transcription antitermination factor NusB;protein_id=WP_037573858.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 5151 5525 . - . ID=gene-RM615_RS04275;Name=RM615_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04275;old_locus_tag=RM615_04275 NZ_JAVRJW010000002.1 Protein Homology CDS 5151 5525 . - 0 ID=cds-WP_233654881.1;Parent=gene-RM615_RS04275;Dbxref=GenBank:WP_233654881.1;Name=WP_233654881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=RM615_RS04275;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_233654881.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 5548 6903 . - . ID=gene-RM615_RS04280;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=RM615_RS04280;old_locus_tag=RM615_04280 NZ_JAVRJW010000002.1 Protein Homology CDS 5548 6903 . - 0 ID=cds-WP_037573862.1;Parent=gene-RM615_RS04280;Dbxref=GenBank:WP_037573862.1;Name=WP_037573862.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500137.1;locus_tag=RM615_RS04280;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_037573862.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 6905 7363 . - . ID=gene-RM615_RS04285;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=RM615_RS04285;old_locus_tag=RM615_04285 NZ_JAVRJW010000002.1 Protein Homology CDS 6905 7363 . - 0 ID=cds-WP_037573863.1;Parent=gene-RM615_RS04285;Dbxref=GenBank:WP_037573863.1;Name=WP_037573863.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451908.1;locus_tag=RM615_RS04285;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_037573863.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 7579 8136 . - . ID=gene-RM615_RS04290;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=RM615_RS04290;old_locus_tag=RM615_04290 NZ_JAVRJW010000002.1 Protein Homology CDS 7579 8136 . - 0 ID=cds-WP_037573865.1;Parent=gene-RM615_RS04290;Dbxref=GenBank:WP_037573865.1;Name=WP_037573865.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275683.1;locus_tag=RM615_RS04290;product=elongation factor P;protein_id=WP_037573865.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 8164 9225 . - . ID=gene-RM615_RS04295;Name=RM615_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04295;old_locus_tag=RM615_04295 NZ_JAVRJW010000002.1 Protein Homology CDS 8164 9225 . - 0 ID=cds-WP_103159092.1;Parent=gene-RM615_RS04295;Dbxref=GenBank:WP_103159092.1;Name=WP_103159092.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425159.1;locus_tag=RM615_RS04295;product=M24 family metallopeptidase;protein_id=WP_103159092.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 9317 9919 . + . ID=gene-RM615_RS04300;Name=RM615_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04300;old_locus_tag=RM615_04300 NZ_JAVRJW010000002.1 Protein Homology CDS 9317 9919 . + 0 ID=cds-WP_037573870.1;Parent=gene-RM615_RS04300;Dbxref=GenBank:WP_037573870.1;Name=WP_037573870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425160.1;locus_tag=RM615_RS04300;product=hypothetical protein;protein_id=WP_037573870.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 9931 10155 . + . ID=gene-RM615_RS04305;Name=RM615_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04305;old_locus_tag=RM615_04305 NZ_JAVRJW010000002.1 Protein Homology CDS 9931 10155 . + 0 ID=cds-WP_037573873.1;Parent=gene-RM615_RS04305;Dbxref=GenBank:WP_037573873.1;Name=WP_037573873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425161.1;locus_tag=RM615_RS04305;product=SA1362 family protein;protein_id=WP_037573873.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 10205 11035 . - . ID=gene-RM615_RS04310;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=RM615_RS04310;old_locus_tag=RM615_04310 NZ_JAVRJW010000002.1 Protein Homology CDS 10205 11035 . - 0 ID=cds-WP_037573874.1;Parent=gene-RM615_RS04310;Dbxref=GenBank:WP_037573874.1;Name=WP_037573874.1;Ontology_term=GO:0009107,GO:0009249,GO:0036211,GO:0033819;gbkey=CDS;gene=lipM;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=RM615_RS04310;product=octanoyltransferase LipM;protein_id=WP_037573874.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 11183 11569 . + . ID=gene-RM615_RS04315;Name=RM615_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04315;old_locus_tag=RM615_04315 NZ_JAVRJW010000002.1 Protein Homology CDS 11183 11569 . + 0 ID=cds-WP_037573877.1;Parent=gene-RM615_RS04315;Dbxref=GenBank:WP_037573877.1;Name=WP_037573877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572316.1;locus_tag=RM615_RS04315;product=rhodanese-like domain-containing protein;protein_id=WP_037573877.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 11726 13201 . - . ID=gene-RM615_RS04320;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=RM615_RS04320;old_locus_tag=RM615_04320 NZ_JAVRJW010000002.1 Protein Homology CDS 11726 13201 . - 0 ID=cds-WP_037573879.1;Parent=gene-RM615_RS04320;Dbxref=GenBank:WP_037573879.1;Name=WP_037573879.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382526.1;locus_tag=RM615_RS04320;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_037573879.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 13191 14540 . - . ID=gene-RM615_RS04325;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=RM615_RS04325;old_locus_tag=RM615_04325 NZ_JAVRJW010000002.1 Protein Homology CDS 13191 14540 . - 0 ID=cds-WP_037573882.1;Parent=gene-RM615_RS04325;Dbxref=GenBank:WP_037573882.1;Name=WP_037573882.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=RM615_RS04325;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_037573882.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 14553 15644 . - . ID=gene-RM615_RS04330;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=RM615_RS04330;old_locus_tag=RM615_04330 NZ_JAVRJW010000002.1 Protein Homology CDS 14553 15644 . - 0 ID=cds-WP_311540934.1;Parent=gene-RM615_RS04330;Dbxref=GenBank:WP_311540934.1;Name=WP_311540934.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=RM615_RS04330;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_311540934.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch riboswitch 15717 15810 . - . ID=id-NZ_JAVRJW010000002.1:15717..15810;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00504,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000002.1 RefSeq gene 15797 16321 . - . ID=gene-RM615_RS04335;Name=RM615_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04335;old_locus_tag=RM615_04335 NZ_JAVRJW010000002.1 Protein Homology CDS 15797 16321 . - 0 ID=cds-WP_084276016.1;Parent=gene-RM615_RS04335;Dbxref=GenBank:WP_084276016.1;Name=WP_084276016.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469341.1;locus_tag=RM615_RS04335;product=shikimate kinase;protein_id=WP_084276016.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 16486 16860 . - . ID=gene-RM615_RS04340;Name=RM615_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04340;old_locus_tag=RM615_04340 NZ_JAVRJW010000002.1 Protein Homology CDS 16486 16860 . - 0 ID=cds-WP_107374195.1;Parent=gene-RM615_RS04340;Dbxref=GenBank:WP_107374195.1;Name=WP_107374195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027310.7;locus_tag=RM615_RS04340;product=competence type IV pilus minor pilin ComGF;protein_id=WP_107374195.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 16877 17125 . - . ID=gene-RM615_RS04345;Name=RM615_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04345;old_locus_tag=RM615_04345 NZ_JAVRJW010000002.1 GeneMarkS-2+ CDS 16877 17125 . - 0 ID=cds-WP_157946064.1;Parent=gene-RM615_RS04345;Dbxref=GenBank:WP_157946064.1;Name=WP_157946064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS04345;product=hypothetical protein;protein_id=WP_157946064.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 17164 17595 . - . ID=gene-RM615_RS04350;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=RM615_RS04350;old_locus_tag=RM615_04350 NZ_JAVRJW010000002.1 Protein Homology CDS 17164 17595 . - 0 ID=cds-WP_051604961.1;Parent=gene-RM615_RS04350;Dbxref=GenBank:WP_051604961.1;Name=WP_051604961.1;gbkey=CDS;gene=comGD;inference=COORDINATES: protein motif:HMM:NF040982.1;locus_tag=RM615_RS04350;product=competence type IV pilus minor pilin ComGD;protein_id=WP_051604961.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 17585 17902 . - . ID=gene-RM615_RS04355;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=RM615_RS04355;old_locus_tag=RM615_04355 NZ_JAVRJW010000002.1 Protein Homology CDS 17585 17902 . - 0 ID=cds-WP_037573894.1;Parent=gene-RM615_RS04355;Dbxref=GenBank:WP_037573894.1;Name=WP_037573894.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464660.1;locus_tag=RM615_RS04355;product=competence type IV pilus major pilin ComGC;protein_id=WP_037573894.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 17917 18984 . - . ID=gene-RM615_RS04360;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=RM615_RS04360;old_locus_tag=RM615_04360 NZ_JAVRJW010000002.1 Protein Homology CDS 17917 18984 . - 0 ID=cds-WP_105965327.1;Parent=gene-RM615_RS04360;Dbxref=GenBank:WP_105965327.1;Name=WP_105965327.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=RM615_RS04360;product=competence type IV pilus assembly protein ComGB;protein_id=WP_105965327.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 18953 19927 . - . ID=gene-RM615_RS04365;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=RM615_RS04365;old_locus_tag=RM615_04365 NZ_JAVRJW010000002.1 Protein Homology CDS 18953 19927 . - 0 ID=cds-WP_037573899.1;Parent=gene-RM615_RS04365;Dbxref=GenBank:WP_037573899.1;Name=WP_037573899.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=RM615_RS04365;product=competence type IV pilus ATPase ComGA;protein_id=WP_037573899.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 19980 20603 . - . ID=gene-RM615_RS04370;Name=RM615_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04370;old_locus_tag=RM615_04370 NZ_JAVRJW010000002.1 Protein Homology CDS 19980 20603 . - 0 ID=cds-WP_037573902.1;Parent=gene-RM615_RS04370;Dbxref=GenBank:WP_037573902.1;Name=WP_037573902.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558017.1;locus_tag=RM615_RS04370;product=MBL fold metallo-hydrolase;protein_id=WP_037573902.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 20617 20928 . - . ID=gene-RM615_RS04375;Name=RM615_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04375;old_locus_tag=RM615_04375 NZ_JAVRJW010000002.1 Protein Homology CDS 20617 20928 . - 0 ID=cds-WP_037573905.1;Parent=gene-RM615_RS04375;Dbxref=GenBank:WP_037573905.1;Name=WP_037573905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433945.1;locus_tag=RM615_RS04375;product=MTH1187 family thiamine-binding protein;protein_id=WP_037573905.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 20929 21915 . - . ID=gene-RM615_RS04380;Name=RM615_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04380;old_locus_tag=RM615_04380 NZ_JAVRJW010000002.1 Protein Homology CDS 20929 21915 . - 0 ID=cds-WP_037573907.1;Parent=gene-RM615_RS04380;Dbxref=GenBank:WP_037573907.1;Name=WP_037573907.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=RM615_RS04380;product=ROK family glucokinase;protein_id=WP_037573907.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 21912 22115 . - . ID=gene-RM615_RS04385;Name=RM615_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04385;old_locus_tag=RM615_04385 NZ_JAVRJW010000002.1 Protein Homology CDS 21912 22115 . - 0 ID=cds-WP_037573910.1;Parent=gene-RM615_RS04385;Dbxref=GenBank:WP_037573910.1;Name=WP_037573910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=RM615_RS04385;product=YqgQ family protein;protein_id=WP_037573910.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 22117 23556 . - . ID=gene-RM615_RS04390;Name=RM615_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04390;old_locus_tag=RM615_04390 NZ_JAVRJW010000002.1 Protein Homology CDS 22117 23556 . - 0 ID=cds-WP_311540562.1;Parent=gene-RM615_RS04390;Dbxref=GenBank:WP_311540562.1;Name=WP_311540562.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=RM615_RS04390;product=rhomboid family intramembrane serine protease;protein_id=WP_311540562.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 23574 24113 . - . ID=gene-RM615_RS04395;Name=RM615_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04395;old_locus_tag=RM615_04395 NZ_JAVRJW010000002.1 Protein Homology CDS 23574 24113 . - 0 ID=cds-WP_037573917.1;Parent=gene-RM615_RS04395;Dbxref=GenBank:WP_037573917.1;Name=WP_037573917.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382545.1;locus_tag=RM615_RS04395;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_037573917.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 24309 24473 . - . ID=gene-RM615_RS04400;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM615_RS04400;old_locus_tag=RM615_04400 NZ_JAVRJW010000002.1 Protein Homology CDS 24309 24473 . - 0 ID=cds-WP_255201399.1;Parent=gene-RM615_RS04400;Dbxref=GenBank:WP_255201399.1;Name=WP_255201399.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM615_RS04400;product=50S ribosomal protein L33;protein_id=WP_255201399.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 24529 25176 . - . ID=gene-RM615_RS04405;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=RM615_RS04405;old_locus_tag=RM615_04405 NZ_JAVRJW010000002.1 Protein Homology CDS 24529 25176 . - 0 ID=cds-WP_037573922.1;Parent=gene-RM615_RS04405;Dbxref=GenBank:WP_037573922.1;Name=WP_037573922.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468770.1;locus_tag=RM615_RS04405;product=phosphate signaling complex protein PhoU;protein_id=WP_037573922.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 25181 26053 . - . ID=gene-RM615_RS04410;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=RM615_RS04410;old_locus_tag=RM615_04410 NZ_JAVRJW010000002.1 Protein Homology CDS 25181 26053 . - 0 ID=cds-WP_037573925.1;Parent=gene-RM615_RS04410;Dbxref=GenBank:WP_037573925.1;Name=WP_037573925.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165224.1;locus_tag=RM615_RS04410;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_037573925.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 26087 26965 . - . ID=gene-RM615_RS04415;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=RM615_RS04415;old_locus_tag=RM615_04415 NZ_JAVRJW010000002.1 Protein Homology CDS 26087 26965 . - 0 ID=cds-WP_037573927.1;Parent=gene-RM615_RS04415;Dbxref=GenBank:WP_037573927.1;Name=WP_037573927.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168690.1;locus_tag=RM615_RS04415;product=phosphate ABC transporter permease PstA;protein_id=WP_037573927.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 26967 27893 . - . ID=gene-RM615_RS04420;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=RM615_RS04420;old_locus_tag=RM615_04420 NZ_JAVRJW010000002.1 Protein Homology CDS 26967 27893 . - 0 ID=cds-WP_311540561.1;Parent=gene-RM615_RS04420;Dbxref=GenBank:WP_311540561.1;Name=WP_311540561.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453209.1;locus_tag=RM615_RS04420;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_311540561.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 27976 28947 . - . ID=gene-RM615_RS04425;Name=RM615_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04425;old_locus_tag=RM615_04425 NZ_JAVRJW010000002.1 Protein Homology CDS 27976 28947 . - 0 ID=cds-WP_037573932.1;Parent=gene-RM615_RS04425;Dbxref=GenBank:WP_037573932.1;Name=WP_037573932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425185.1;locus_tag=RM615_RS04425;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_037573932.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 29218 31254 . - . ID=gene-RM615_RS04430;Name=RM615_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04430;old_locus_tag=RM615_04430 NZ_JAVRJW010000002.1 Protein Homology CDS 29218 31254 . - 0 ID=cds-WP_105965330.1;Parent=gene-RM615_RS04430;Dbxref=GenBank:WP_105965330.1;Name=WP_105965330.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425186.1;locus_tag=RM615_RS04430;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_105965330.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 31480 32079 . - . ID=gene-RM615_RS04435;Name=RM615_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04435;old_locus_tag=RM615_04435 NZ_JAVRJW010000002.1 Protein Homology CDS 31480 32079 . - 0 ID=cds-WP_037573937.1;Parent=gene-RM615_RS04435;Dbxref=GenBank:WP_037573937.1;Name=WP_037573937.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=RM615_RS04435;product=superoxide dismutase;protein_id=WP_037573937.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 32409 33509 . + . ID=gene-RM615_RS04440;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=RM615_RS04440;old_locus_tag=RM615_04440 NZ_JAVRJW010000002.1 Protein Homology CDS 32409 33509 . + 0 ID=cds-WP_105965331.1;Parent=gene-RM615_RS04440;Dbxref=GenBank:WP_105965331.1;Name=WP_105965331.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425188.1;locus_tag=RM615_RS04440;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_105965331.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 33542 33952 . - . ID=gene-RM615_RS04445;Name=RM615_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04445;old_locus_tag=RM615_04445 NZ_JAVRJW010000002.1 Protein Homology CDS 33542 33952 . - 0 ID=cds-WP_037573998.1;Parent=gene-RM615_RS04445;Dbxref=GenBank:WP_037573998.1;Name=WP_037573998.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500166.1;locus_tag=RM615_RS04445;product=Fur family transcriptional regulator;protein_id=WP_037573998.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 33953 34804 . - . ID=gene-RM615_RS04450;Name=RM615_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04450;old_locus_tag=RM615_04450 NZ_JAVRJW010000002.1 Protein Homology CDS 33953 34804 . - 0 ID=cds-WP_311540935.1;Parent=gene-RM615_RS04450;Dbxref=GenBank:WP_311540935.1;Name=WP_311540935.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176228.1;locus_tag=RM615_RS04450;product=metal ABC transporter permease;protein_id=WP_311540935.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 34801 35571 . - . ID=gene-RM615_RS04455;Name=RM615_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04455;old_locus_tag=RM615_04455 NZ_JAVRJW010000002.1 Protein Homology CDS 34801 35571 . - 0 ID=cds-WP_105965458.1;Parent=gene-RM615_RS04455;Dbxref=GenBank:WP_105965458.1;Name=WP_105965458.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455284.1;locus_tag=RM615_RS04455;product=metal ABC transporter ATP-binding protein;protein_id=WP_105965458.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 35709 36599 . - . ID=gene-RM615_RS04460;Name=RM615_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04460;old_locus_tag=RM615_04460 NZ_JAVRJW010000002.1 Protein Homology CDS 35709 36599 . - 0 ID=cds-WP_103158625.1;Parent=gene-RM615_RS04460;Dbxref=GenBank:WP_103158625.1;Name=WP_103158625.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425192.1;locus_tag=RM615_RS04460;product=deoxyribonuclease IV;protein_id=WP_103158625.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 36613 37953 . - . ID=gene-RM615_RS04465;Name=RM615_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04465;old_locus_tag=RM615_04465 NZ_JAVRJW010000002.1 Protein Homology CDS 36613 37953 . - 0 ID=cds-WP_105965457.1;Parent=gene-RM615_RS04465;Dbxref=GenBank:WP_105965457.1;Name=WP_105965457.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425193.1;locus_tag=RM615_RS04465;product=DEAD/DEAH box helicase;protein_id=WP_105965457.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 38140 39108 . + . ID=gene-RM615_RS04470;Name=RM615_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04470;old_locus_tag=RM615_04470 NZ_JAVRJW010000002.1 Protein Homology CDS 38140 39108 . + 0 ID=cds-WP_037574009.1;Parent=gene-RM615_RS04470;Dbxref=GenBank:WP_037574009.1;Name=WP_037574009.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=RM615_RS04470;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_037574009.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 39253 40353 . - . ID=gene-RM615_RS04475;Name=RM615_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04475;old_locus_tag=RM615_04475 NZ_JAVRJW010000002.1 Protein Homology CDS 39253 40353 . - 0 ID=cds-WP_311540936.1;Parent=gene-RM615_RS04475;Dbxref=GenBank:WP_311540936.1;Name=WP_311540936.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472473.1;locus_tag=RM615_RS04475;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_311540936.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 40350 41027 . - . ID=gene-RM615_RS04480;Name=RM615_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04480;old_locus_tag=RM615_04480 NZ_JAVRJW010000002.1 Protein Homology CDS 40350 41027 . - 0 ID=cds-WP_105965455.1;Parent=gene-RM615_RS04480;Dbxref=GenBank:WP_105965455.1;Name=WP_105965455.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=RM615_RS04480;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_105965455.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 41190 42299 . - . ID=gene-RM615_RS04485;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=RM615_RS04485;old_locus_tag=RM615_04485 NZ_JAVRJW010000002.1 Protein Homology CDS 41190 42299 . - 0 ID=cds-WP_019165210.1;Parent=gene-RM615_RS04485;Dbxref=GenBank:WP_019165210.1;Name=WP_019165210.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=RM615_RS04485;product=RNA polymerase sigma factor RpoD;protein_id=WP_019165210.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 42317 44101 . - . ID=gene-RM615_RS04490;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=RM615_RS04490;old_locus_tag=RM615_04490 NZ_JAVRJW010000002.1 Protein Homology CDS 42317 44101 . - 0 ID=cds-WP_136731877.1;Parent=gene-RM615_RS04490;Dbxref=GenBank:WP_136731877.1;Name=WP_136731877.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900432.1;locus_tag=RM615_RS04490;product=DNA primase;protein_id=WP_136731877.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 44173 44997 . - . ID=gene-RM615_RS04495;Name=RM615_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04495;old_locus_tag=RM615_04495 NZ_JAVRJW010000002.1 Protein Homology CDS 44173 44997 . - 0 ID=cds-WP_105965453.1;Parent=gene-RM615_RS04495;Dbxref=GenBank:WP_105965453.1;Name=WP_105965453.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=RM615_RS04495;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_105965453.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 45013 45636 . - . ID=gene-RM615_RS04500;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=RM615_RS04500;old_locus_tag=RM615_04500 NZ_JAVRJW010000002.1 Protein Homology CDS 45013 45636 . - 0 ID=cds-WP_103158618.1;Parent=gene-RM615_RS04500;Dbxref=GenBank:WP_103158618.1;Name=WP_103158618.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=RM615_RS04500;product=transcriptional regulator CcpN;protein_id=WP_103158618.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 46057 47448 . + . ID=gene-RM615_RS04505;Name=RM615_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04505;old_locus_tag=RM615_04505 NZ_JAVRJW010000002.1 Protein Homology CDS 46057 47448 . + 0 ID=cds-WP_311540977.1;Parent=gene-RM615_RS04505;Dbxref=GenBank:WP_311540977.1;Name=WP_311540977.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=RM615_RS04505;product=glycine--tRNA ligase;protein_id=WP_311540977.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 47538 48311 . - . ID=gene-RM615_RS04510;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=RM615_RS04510;old_locus_tag=RM615_04510 NZ_JAVRJW010000002.1 Protein Homology CDS 47538 48311 . - 0 ID=cds-WP_105965451.1;Parent=gene-RM615_RS04510;Dbxref=GenBank:WP_105965451.1;Name=WP_105965451.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=RM615_RS04510;product=DNA repair protein RecO;protein_id=WP_105965451.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 48334 49230 . - . ID=gene-RM615_RS04515;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=RM615_RS04515;old_locus_tag=RM615_04515 NZ_JAVRJW010000002.1 Protein Homology CDS 48334 49230 . - 0 ID=cds-WP_105965450.1;Parent=gene-RM615_RS04515;Dbxref=GenBank:WP_105965450.1;Name=WP_105965450.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=RM615_RS04515;product=GTPase Era;protein_id=WP_105965450.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 49232 49636 . - . ID=gene-RM615_RS04520;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=RM615_RS04520;old_locus_tag=RM615_04520 NZ_JAVRJW010000002.1 Protein Homology CDS 49232 49636 . - 0 ID=cds-WP_037574034.1;Parent=gene-RM615_RS04520;Dbxref=GenBank:WP_037574034.1;Name=WP_037574034.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500181.1;locus_tag=RM615_RS04520;product=cytidine deaminase;protein_id=WP_037574034.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 49651 49986 . - . ID=gene-RM615_RS04525;Name=RM615_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04525;old_locus_tag=RM615_04525 NZ_JAVRJW010000002.1 Protein Homology CDS 49651 49986 . - 0 ID=cds-WP_275113284.1;Parent=gene-RM615_RS04525;Dbxref=GenBank:WP_275113284.1;Name=WP_275113284.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507479.1;locus_tag=RM615_RS04525;product=diacylglycerol kinase family protein;protein_id=WP_275113284.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 49986 50450 . - . ID=gene-RM615_RS04530;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=RM615_RS04530;old_locus_tag=RM615_04530 NZ_JAVRJW010000002.1 Protein Homology CDS 49986 50450 . - 0 ID=cds-WP_037574040.1;Parent=gene-RM615_RS04530;Dbxref=GenBank:WP_037574040.1;Name=WP_037574040.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510508.1;locus_tag=RM615_RS04530;product=rRNA maturation RNase YbeY;protein_id=WP_037574040.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 50450 51397 . - . ID=gene-RM615_RS04535;Name=RM615_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04535;old_locus_tag=RM615_04535 NZ_JAVRJW010000002.1 Protein Homology CDS 50450 51397 . - 0 ID=cds-WP_311540937.1;Parent=gene-RM615_RS04535;Dbxref=GenBank:WP_311540937.1;Name=WP_311540937.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500184.1;locus_tag=RM615_RS04535;product=PhoH family protein;protein_id=WP_311540937.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 51744 52361 . - . ID=gene-RM615_RS04540;Name=RM615_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04540;old_locus_tag=RM615_04540 NZ_JAVRJW010000002.1 Protein Homology CDS 51744 52361 . - 0 ID=cds-WP_105965447.1;Parent=gene-RM615_RS04540;Dbxref=GenBank:WP_105965447.1;Name=WP_105965447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425209.1;locus_tag=RM615_RS04540;product=hypothetical protein;protein_id=WP_105965447.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 52374 53372 . - . ID=gene-RM615_RS04545;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=RM615_RS04545;old_locus_tag=RM615_04545 NZ_JAVRJW010000002.1 Protein Homology CDS 52374 53372 . - 0 ID=cds-WP_105965446.1;Parent=gene-RM615_RS04545;Dbxref=GenBank:WP_105965446.1;Name=WP_105965446.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425210.1;locus_tag=RM615_RS04545;product=flotillin-like protein FloA;protein_id=WP_105965446.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 53385 54074 . - . ID=gene-RM615_RS04550;Name=RM615_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04550;old_locus_tag=RM615_04550 NZ_JAVRJW010000002.1 Protein Homology CDS 53385 54074 . - 0 ID=cds-WP_311540938.1;Parent=gene-RM615_RS04550;Dbxref=GenBank:WP_311540938.1;Name=WP_311540938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500187.1;locus_tag=RM615_RS04550;product=NfeD family protein;protein_id=WP_311540938.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 54286 54462 . - . ID=gene-RM615_RS04555;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=RM615_RS04555;old_locus_tag=RM615_04555 NZ_JAVRJW010000002.1 Protein Homology CDS 54286 54462 . - 0 ID=cds-WP_002471046.1;Parent=gene-RM615_RS04555;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=RM615_RS04555;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 54593 55939 . - . ID=gene-RM615_RS04560;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=RM615_RS04560;old_locus_tag=RM615_04560 NZ_JAVRJW010000002.1 Protein Homology CDS 54593 55939 . - 0 ID=cds-WP_311540939.1;Parent=gene-RM615_RS04560;Dbxref=GenBank:WP_311540939.1;Name=WP_311540939.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=RM615_RS04560;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_311540939.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 55958 56707 . - . ID=gene-RM615_RS04565;Name=RM615_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04565;old_locus_tag=RM615_04565 NZ_JAVRJW010000002.1 Protein Homology CDS 55958 56707 . - 0 ID=cds-WP_107363423.1;Parent=gene-RM615_RS04565;Dbxref=GenBank:WP_107363423.1;Name=WP_107363423.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=RM615_RS04565;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_107363423.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 56713 57642 . - . ID=gene-RM615_RS04570;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=RM615_RS04570;old_locus_tag=RM615_04570 NZ_JAVRJW010000002.1 Protein Homology CDS 56713 57642 . - 0 ID=cds-WP_105965444.1;Parent=gene-RM615_RS04570;Dbxref=GenBank:WP_105965444.1;Name=WP_105965444.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831256.1;locus_tag=RM615_RS04570;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_105965444.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 57646 58776 . - . ID=gene-RM615_RS04575;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=RM615_RS04575;old_locus_tag=RM615_04575 NZ_JAVRJW010000002.1 Protein Homology CDS 57646 58776 . - 0 ID=cds-WP_107367471.1;Parent=gene-RM615_RS04575;Dbxref=GenBank:WP_107367471.1;Name=WP_107367471.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=RM615_RS04575;product=molecular chaperone DnaJ;protein_id=WP_107367471.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 58892 60724 . - . ID=gene-RM615_RS04580;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=RM615_RS04580;old_locus_tag=RM615_04580 NZ_JAVRJW010000002.1 Protein Homology CDS 58892 60724 . - 0 ID=cds-WP_037574062.1;Parent=gene-RM615_RS04580;Dbxref=GenBank:WP_037574062.1;Name=WP_037574062.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500193.1;locus_tag=RM615_RS04580;product=molecular chaperone DnaK;protein_id=WP_037574062.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 60788 61393 . - . ID=gene-RM615_RS04585;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=RM615_RS04585;old_locus_tag=RM615_04585 NZ_JAVRJW010000002.1 Protein Homology CDS 60788 61393 . - 0 ID=cds-WP_037574065.1;Parent=gene-RM615_RS04585;Dbxref=GenBank:WP_037574065.1;Name=WP_037574065.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182226.1;locus_tag=RM615_RS04585;product=nucleotide exchange factor GrpE;protein_id=WP_037574065.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 61432 62415 . - . ID=gene-RM615_RS04590;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=RM615_RS04590;old_locus_tag=RM615_04590 NZ_JAVRJW010000002.1 Protein Homology CDS 61432 62415 . - 0 ID=cds-WP_037574068.1;Parent=gene-RM615_RS04590;Dbxref=GenBank:WP_037574068.1;Name=WP_037574068.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=RM615_RS04590;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_037574068.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 62515 63636 . - . ID=gene-RM615_RS04595;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=RM615_RS04595;old_locus_tag=RM615_04595 NZ_JAVRJW010000002.1 Protein Homology CDS 62515 63636 . - 0 ID=cds-WP_037574619.1;Parent=gene-RM615_RS04595;Dbxref=GenBank:WP_037574619.1;Name=WP_037574619.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=RM615_RS04595;product=radical SAM family heme chaperone HemW;protein_id=WP_037574619.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 63698 65521 . - . ID=gene-RM615_RS04600;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=RM615_RS04600;old_locus_tag=RM615_04600 NZ_JAVRJW010000002.1 Protein Homology CDS 63698 65521 . - 0 ID=cds-WP_037574071.1;Parent=gene-RM615_RS04600;Dbxref=GenBank:WP_037574071.1;Name=WP_037574071.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=RM615_RS04600;product=translation elongation factor 4;protein_id=WP_037574071.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 65763 66011 . + . ID=gene-RM615_RS04605;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=RM615_RS04605;old_locus_tag=RM615_04605 NZ_JAVRJW010000002.1 Protein Homology CDS 65763 66011 . + 0 ID=cds-WP_037574074.1;Parent=gene-RM615_RS04605;Dbxref=GenBank:WP_037574074.1;Name=WP_037574074.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=RM615_RS04605;product=30S ribosomal protein S20;protein_id=WP_037574074.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 66038 67015 . - . ID=gene-RM615_RS04610;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=RM615_RS04610;old_locus_tag=RM615_04610 NZ_JAVRJW010000002.1 Protein Homology CDS 66038 67015 . - 0 ID=cds-WP_105965439.1;Parent=gene-RM615_RS04610;Dbxref=GenBank:WP_105965439.1;Name=WP_105965439.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836898.1;locus_tag=RM615_RS04610;product=DNA polymerase III subunit delta;protein_id=WP_105965439.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 67112 69205 . - . ID=gene-RM615_RS04615;Name=RM615_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04615;old_locus_tag=RM615_04615 NZ_JAVRJW010000002.1 Protein Homology CDS 67112 69205 . - 0 ID=cds-WP_311540940.1;Parent=gene-RM615_RS04615;Dbxref=GenBank:WP_311540940.1;Name=WP_311540940.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=RM615_RS04615;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_311540940.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 69338 69799 . - . ID=gene-RM615_RS04620;Name=RM615_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04620;old_locus_tag=RM615_04620 NZ_JAVRJW010000002.1 Protein Homology CDS 69338 69799 . - 0 ID=cds-WP_037574083.1;Parent=gene-RM615_RS04620;Dbxref=GenBank:WP_037574083.1;Name=WP_037574083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458970.1;locus_tag=RM615_RS04620;product=ComE operon protein 2;protein_id=WP_037574083.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 69882 70520 . - . ID=gene-RM615_RS04625;Name=RM615_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04625;old_locus_tag=RM615_04625 NZ_JAVRJW010000002.1 Protein Homology CDS 69882 70520 . - 0 ID=cds-WP_311540941.1;Parent=gene-RM615_RS04625;Dbxref=GenBank:WP_311540941.1;Name=WP_311540941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382608.1;locus_tag=RM615_RS04625;product=helix-hairpin-helix domain-containing protein;protein_id=WP_311540941.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 70569 71291 . - . ID=gene-RM615_RS04630;Name=RM615_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04630;old_locus_tag=RM615_04630 NZ_JAVRJW010000002.1 Protein Homology CDS 70569 71291 . - 0 ID=cds-WP_182470768.1;Parent=gene-RM615_RS04630;Dbxref=GenBank:WP_182470768.1;Name=WP_182470768.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=RM615_RS04630;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_182470768.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 71291 71647 . - . ID=gene-RM615_RS04635;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=RM615_RS04635;old_locus_tag=RM615_04635 NZ_JAVRJW010000002.1 Protein Homology CDS 71291 71647 . - 0 ID=cds-WP_103158624.1;Parent=gene-RM615_RS04635;Dbxref=GenBank:WP_103158624.1;Name=WP_103158624.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=RM615_RS04635;product=ribosome silencing factor;protein_id=WP_103158624.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 71660 72232 . - . ID=gene-RM615_RS04640;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=RM615_RS04640;old_locus_tag=RM615_04640 NZ_JAVRJW010000002.1 Protein Homology CDS 71660 72232 . - 0 ID=cds-WP_037574093.1;Parent=gene-RM615_RS04640;Dbxref=GenBank:WP_037574093.1;Name=WP_037574093.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369462.1;locus_tag=RM615_RS04640;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_037574093.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 72225 72791 . - . ID=gene-RM615_RS04645;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=RM615_RS04645;old_locus_tag=RM615_04645 NZ_JAVRJW010000002.1 Protein Homology CDS 72225 72791 . - 0 ID=cds-WP_311540942.1;Parent=gene-RM615_RS04645;Dbxref=GenBank:WP_311540942.1;Name=WP_311540942.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=RM615_RS04645;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_311540942.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 72791 73087 . - . ID=gene-RM615_RS04650;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=RM615_RS04650;old_locus_tag=RM615_04650 NZ_JAVRJW010000002.1 Protein Homology CDS 72791 73087 . - 0 ID=cds-WP_037574099.1;Parent=gene-RM615_RS04650;Dbxref=GenBank:WP_037574099.1;Name=WP_037574099.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440113.1;locus_tag=RM615_RS04650;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_037574099.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 73097 73909 . - . ID=gene-RM615_RS04655;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=RM615_RS04655;old_locus_tag=RM615_04655 NZ_JAVRJW010000002.1 Protein Homology CDS 73097 73909 . - 0 ID=cds-WP_107366187.1;Parent=gene-RM615_RS04655;Dbxref=GenBank:WP_107366187.1;Name=WP_107366187.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425232.1;locus_tag=RM615_RS04655;product=shikimate dehydrogenase;protein_id=WP_107366187.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 73923 75023 . - . ID=gene-RM615_RS04660;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=RM615_RS04660;old_locus_tag=RM615_04660 NZ_JAVRJW010000002.1 Protein Homology CDS 73923 75023 . - 0 ID=cds-WP_107366188.1;Parent=gene-RM615_RS04660;Dbxref=GenBank:WP_107366188.1;Name=WP_107366188.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280135.1;locus_tag=RM615_RS04660;product=ribosome biogenesis GTPase YqeH;protein_id=WP_107366188.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 75020 75550 . - . ID=gene-RM615_RS04665;Name=RM615_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04665;old_locus_tag=RM615_04665 NZ_JAVRJW010000002.1 Protein Homology CDS 75020 75550 . - 0 ID=cds-WP_037574108.1;Parent=gene-RM615_RS04665;Dbxref=GenBank:WP_037574108.1;Name=WP_037574108.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=RM615_RS04665;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_037574108.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 75617 76309 . - . ID=gene-RM615_RS04670;Name=RM615_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04670;old_locus_tag=RM615_04670 NZ_JAVRJW010000002.1 Protein Homology CDS 75617 76309 . - 0 ID=cds-WP_037574111.1;Parent=gene-RM615_RS04670;Dbxref=GenBank:WP_037574111.1;Name=WP_037574111.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471057.1;locus_tag=RM615_RS04670;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_037574111.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 76594 77832 . - . ID=gene-RM615_RS04675;Name=RM615_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04675;old_locus_tag=RM615_04675 NZ_JAVRJW010000002.1 Protein Homology CDS 76594 77832 . - 0 ID=cds-WP_037574114.1;Parent=gene-RM615_RS04675;Dbxref=GenBank:WP_037574114.1;Name=WP_037574114.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165175.1;locus_tag=RM615_RS04675;product=NRAMP family divalent metal transporter;protein_id=WP_037574114.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 77836 78597 . - . ID=gene-RM615_RS04680;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=RM615_RS04680;old_locus_tag=RM615_04680 NZ_JAVRJW010000002.1 Protein Homology CDS 77836 78597 . - 0 ID=cds-WP_037574117.1;Parent=gene-RM615_RS04680;Dbxref=GenBank:WP_037574117.1;Name=WP_037574117.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382620.1;locus_tag=RM615_RS04680;product=5-oxoprolinase subunit PxpA;protein_id=WP_037574117.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 78590 79954 . - . ID=gene-RM615_RS04685;Name=RM615_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04685;old_locus_tag=RM615_04685 NZ_JAVRJW010000002.1 Protein Homology CDS 78590 79954 . - 0 ID=cds-WP_311540943.1;Parent=gene-RM615_RS04685;Dbxref=GenBank:WP_311540943.1;Name=WP_311540943.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=RM615_RS04685;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_311540943.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 79966 80412 . - . ID=gene-RM615_RS04690;Name=RM615_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04690;old_locus_tag=RM615_04690 NZ_JAVRJW010000002.1 Protein Homology CDS 79966 80412 . - 0 ID=cds-WP_103159032.1;Parent=gene-RM615_RS04690;Dbxref=GenBank:WP_103159032.1;Name=WP_103159032.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425239.1;locus_tag=RM615_RS04690;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_103159032.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 80403 81428 . - . ID=gene-RM615_RS04695;Name=RM615_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04695;old_locus_tag=RM615_04695 NZ_JAVRJW010000002.1 Protein Homology CDS 80403 81428 . - 0 ID=cds-WP_311539699.1;Parent=gene-RM615_RS04695;Dbxref=GenBank:WP_311539699.1;Name=WP_311539699.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=RM615_RS04695;product=5-oxoprolinase subunit C family protein;protein_id=WP_311539699.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 81418 82149 . - . ID=gene-RM615_RS04700;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=RM615_RS04700;old_locus_tag=RM615_04700 NZ_JAVRJW010000002.1 Protein Homology CDS 81418 82149 . - 0 ID=cds-WP_037574130.1;Parent=gene-RM615_RS04700;Dbxref=GenBank:WP_037574130.1;Name=WP_037574130.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=RM615_RS04700;product=5-oxoprolinase subunit PxpB;protein_id=WP_037574130.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 82387 82863 . - . ID=gene-RM615_RS04705;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=RM615_RS04705;old_locus_tag=RM615_04705 NZ_JAVRJW010000002.1 Protein Homology CDS 82387 82863 . - 0 ID=cds-WP_105965429.1;Parent=gene-RM615_RS04705;Dbxref=GenBank:WP_105965429.1;Name=WP_105965429.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=RM615_RS04705;product=transcription elongation factor GreA;protein_id=WP_105965429.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 82890 83516 . - . ID=gene-RM615_RS04710;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=RM615_RS04710;old_locus_tag=RM615_04710 NZ_JAVRJW010000002.1 Protein Homology CDS 82890 83516 . - 0 ID=cds-WP_037574136.1;Parent=gene-RM615_RS04710;Dbxref=GenBank:WP_037574136.1;Name=WP_037574136.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458952.1;locus_tag=RM615_RS04710;product=uridine kinase;protein_id=WP_037574136.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 83520 84785 . - . ID=gene-RM615_RS04715;Name=RM615_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04715;old_locus_tag=RM615_04715 NZ_JAVRJW010000002.1 Protein Homology CDS 83520 84785 . - 0 ID=cds-WP_037574139.1;Parent=gene-RM615_RS04715;Dbxref=GenBank:WP_037574139.1;Name=WP_037574139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471048.1;locus_tag=RM615_RS04715;product=peptidase U32 family protein;protein_id=WP_037574139.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 84823 85752 . - . ID=gene-RM615_RS04720;Name=RM615_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04720;old_locus_tag=RM615_04720 NZ_JAVRJW010000002.1 Protein Homology CDS 84823 85752 . - 0 ID=cds-WP_105965427.1;Parent=gene-RM615_RS04720;Dbxref=GenBank:WP_105965427.1;Name=WP_105965427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=RM615_RS04720;product=peptidase U32 family protein;protein_id=WP_105965427.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 85745 86389 . - . ID=gene-RM615_RS04725;Name=RM615_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04725;old_locus_tag=RM615_04725 NZ_JAVRJW010000002.1 Protein Homology CDS 85745 86389 . - 0 ID=cds-WP_311540945.1;Parent=gene-RM615_RS04725;Dbxref=GenBank:WP_311540945.1;Name=WP_311540945.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=RM615_RS04725;product=O-methyltransferase;protein_id=WP_311540945.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 86770 87084 . - . ID=gene-RM615_RS04730;Name=RM615_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04730;old_locus_tag=RM615_04730 NZ_JAVRJW010000002.1 Protein Homology CDS 86770 87084 . - 0 ID=cds-WP_037574148.1;Parent=gene-RM615_RS04730;Dbxref=GenBank:WP_037574148.1;Name=WP_037574148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=RM615_RS04730;product=DUF1292 domain-containing protein;protein_id=WP_037574148.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 87099 87527 . - . ID=gene-RM615_RS04735;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=RM615_RS04735;old_locus_tag=RM615_04735 NZ_JAVRJW010000002.1 Protein Homology CDS 87099 87527 . - 0 ID=cds-WP_037574153.1;Parent=gene-RM615_RS04735;Dbxref=GenBank:WP_037574153.1;Name=WP_037574153.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=RM615_RS04735;product=Holliday junction resolvase RuvX;protein_id=WP_037574153.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 87520 87792 . - . ID=gene-RM615_RS04740;Name=RM615_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04740;old_locus_tag=RM615_04740 NZ_JAVRJW010000002.1 Protein Homology CDS 87520 87792 . - 0 ID=cds-WP_037574156.1;Parent=gene-RM615_RS04740;Dbxref=GenBank:WP_037574156.1;Name=WP_037574156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=RM615_RS04740;product=IreB family regulatory phosphoprotein;protein_id=WP_037574156.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 87854 90484 . - . ID=gene-RM615_RS04745;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=RM615_RS04745;old_locus_tag=RM615_04745 NZ_JAVRJW010000002.1 Protein Homology CDS 87854 90484 . - 0 ID=cds-WP_107378379.1;Parent=gene-RM615_RS04745;Dbxref=GenBank:WP_107378379.1;Name=WP_107378379.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=RM615_RS04745;product=alanine--tRNA ligase;protein_id=WP_107378379.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 90710 93091 . - . ID=gene-RM615_RS04750;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=RM615_RS04750;old_locus_tag=RM615_04750 NZ_JAVRJW010000002.1 Protein Homology CDS 90710 93091 . - 0 ID=cds-WP_311539179.1;Parent=gene-RM615_RS04750;Dbxref=GenBank:WP_311539179.1;Name=WP_311539179.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425251.1;locus_tag=RM615_RS04750;product=SF1B family DNA helicase RecD2;protein_id=WP_311539179.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 93094 93768 . - . ID=gene-RM615_RS04755;Name=RM615_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04755;old_locus_tag=RM615_04755 NZ_JAVRJW010000002.1 Protein Homology CDS 93094 93768 . - 0 ID=cds-WP_103159036.1;Parent=gene-RM615_RS04755;Dbxref=GenBank:WP_103159036.1;Name=WP_103159036.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=RM615_RS04755;product=tetratricopeptide repeat protein;protein_id=WP_103159036.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 93791 94903 . - . ID=gene-RM615_RS04760;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=RM615_RS04760;old_locus_tag=RM615_04760 NZ_JAVRJW010000002.1 Protein Homology CDS 93791 94903 . - 0 ID=cds-WP_103159037.1;Parent=gene-RM615_RS04760;Dbxref=GenBank:WP_103159037.1;Name=WP_103159037.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=RM615_RS04760;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_103159037.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 94900 96048 . - . ID=gene-RM615_RS04765;Name=RM615_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04765;old_locus_tag=RM615_04765 NZ_JAVRJW010000002.1 Protein Homology CDS 94900 96048 . - 0 ID=cds-WP_037574172.1;Parent=gene-RM615_RS04765;Dbxref=GenBank:WP_037574172.1;Name=WP_037574172.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471009.1;locus_tag=RM615_RS04765;product=cysteine desulfurase family protein;protein_id=WP_037574172.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 96268 97281 . + . ID=gene-RM615_RS04770;Name=RM615_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04770;old_locus_tag=RM615_04770 NZ_JAVRJW010000002.1 Protein Homology CDS 96268 97281 . + 0 ID=cds-WP_037574175.1;Parent=gene-RM615_RS04770;Dbxref=GenBank:WP_037574175.1;Name=WP_037574175.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425255.1;locus_tag=RM615_RS04770;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037574175.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 97326 97481 . - . ID=gene-RM615_RS04775;Name=RM615_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04775;old_locus_tag=RM615_04775 NZ_JAVRJW010000002.1 Protein Homology CDS 97326 97481 . - 0 ID=cds-WP_165806095.1;Parent=gene-RM615_RS04775;Dbxref=GenBank:WP_165806095.1;Name=WP_165806095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165159.1;locus_tag=RM615_RS04775;product=hypothetical protein;protein_id=WP_165806095.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 97575 98405 . - . ID=gene-RM615_RS04780;Name=RM615_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04780;old_locus_tag=RM615_04780 NZ_JAVRJW010000002.1 Protein Homology CDS 97575 98405 . - 0 ID=cds-WP_311539180.1;Parent=gene-RM615_RS04780;Dbxref=GenBank:WP_311539180.1;Name=WP_311539180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=RM615_RS04780;product=aldo/keto reductase;protein_id=WP_311539180.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 98476 98895 . - . ID=gene-RM615_RS04785;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=RM615_RS04785;old_locus_tag=RM615_04785 NZ_JAVRJW010000002.1 Protein Homology CDS 98476 98895 . - 0 ID=cds-WP_037574180.1;Parent=gene-RM615_RS04785;Dbxref=GenBank:WP_037574180.1;Name=WP_037574180.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=RM615_RS04785;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_037574180.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 99039 100298 . + . ID=gene-RM615_RS04790;Name=RM615_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04790;old_locus_tag=RM615_04790 NZ_JAVRJW010000002.1 Protein Homology CDS 99039 100298 . + 0 ID=cds-WP_037574183.1;Parent=gene-RM615_RS04790;Dbxref=GenBank:WP_037574183.1;Name=WP_037574183.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467523.1;locus_tag=RM615_RS04790;product=replication-associated recombination protein A;protein_id=WP_037574183.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 100347 101114 . - . ID=gene-RM615_RS04795;Name=RM615_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04795;old_locus_tag=RM615_04795 NZ_JAVRJW010000002.1 Protein Homology CDS 100347 101114 . - 0 ID=cds-WP_037574186.1;Parent=gene-RM615_RS04795;Dbxref=GenBank:WP_037574186.1;Name=WP_037574186.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=RM615_RS04795;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_037574186.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 101178 101369 . - . ID=gene-RM615_RS04800;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=RM615_RS04800;old_locus_tag=RM615_04800 NZ_JAVRJW010000002.1 cmsearch ncRNA 101178 101369 . - . ID=rna-RM615_RS04800;Parent=gene-RM615_RS04800;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS04800;product=6S RNA NZ_JAVRJW010000002.1 cmsearch exon 101178 101369 . - . ID=exon-RM615_RS04800-1;Parent=rna-RM615_RS04800;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS04800;product=6S RNA NZ_JAVRJW010000002.1 RefSeq gene 101422 103188 . - . ID=gene-RM615_RS04805;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=RM615_RS04805;old_locus_tag=RM615_04805 NZ_JAVRJW010000002.1 Protein Homology CDS 101422 103188 . - 0 ID=cds-WP_107366197.1;Parent=gene-RM615_RS04805;Dbxref=GenBank:WP_107366197.1;Name=WP_107366197.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=RM615_RS04805;product=aspartate--tRNA ligase;protein_id=WP_107366197.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 103188 104459 . - . ID=gene-RM615_RS04810;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=RM615_RS04810;old_locus_tag=RM615_04810 NZ_JAVRJW010000002.1 Protein Homology CDS 103188 104459 . - 0 ID=cds-WP_103159043.1;Parent=gene-RM615_RS04810;Dbxref=GenBank:WP_103159043.1;Name=WP_103159043.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=RM615_RS04810;product=histidine--tRNA ligase;protein_id=WP_103159043.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 104790 105665 . - . ID=gene-RM615_RS04815;Name=RM615_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04815;old_locus_tag=RM615_04815 NZ_JAVRJW010000002.1 Protein Homology CDS 104790 105665 . - 0 ID=cds-WP_103159044.1;Parent=gene-RM615_RS04815;Dbxref=GenBank:WP_103159044.1;Name=WP_103159044.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=RM615_RS04815;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_103159044.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 105662 106114 . - . ID=gene-RM615_RS04820;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=RM615_RS04820;old_locus_tag=RM615_04820 NZ_JAVRJW010000002.1 Protein Homology CDS 105662 106114 . - 0 ID=cds-WP_103159045.1;Parent=gene-RM615_RS04820;Dbxref=GenBank:WP_103159045.1;Name=WP_103159045.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275586.1;locus_tag=RM615_RS04820;product=D-aminoacyl-tRNA deacylase;protein_id=WP_103159045.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 106126 108315 . - . ID=gene-RM615_RS04825;Name=RM615_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04825;old_locus_tag=RM615_04825 NZ_JAVRJW010000002.1 Protein Homology CDS 106126 108315 . - 0 ID=cds-WP_037574201.1;Parent=gene-RM615_RS04825;Dbxref=GenBank:WP_037574201.1;Name=WP_037574201.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=RM615_RS04825;product=RelA/SpoT family protein;protein_id=WP_037574201.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 108494 109012 . - . ID=gene-RM615_RS04830;Name=RM615_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04830;old_locus_tag=RM615_04830 NZ_JAVRJW010000002.1 Protein Homology CDS 108494 109012 . - 0 ID=cds-WP_037574204.1;Parent=gene-RM615_RS04830;Dbxref=GenBank:WP_037574204.1;Name=WP_037574204.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=RM615_RS04830;product=adenine phosphoribosyltransferase;protein_id=WP_037574204.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 109024 111306 . - . ID=gene-RM615_RS04835;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=RM615_RS04835;old_locus_tag=RM615_04835 NZ_JAVRJW010000002.1 Protein Homology CDS 109024 111306 . - 0 ID=cds-WP_103159046.1;Parent=gene-RM615_RS04835;Dbxref=GenBank:WP_103159046.1;Name=WP_103159046.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451805.1;locus_tag=RM615_RS04835;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_103159046.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 111911 114190 . - . ID=gene-RM615_RS04840;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=RM615_RS04840;old_locus_tag=RM615_04840 NZ_JAVRJW010000002.1 Protein Homology CDS 111911 114190 . - 0 ID=cds-WP_103159047.1;Parent=gene-RM615_RS04840;Dbxref=GenBank:WP_103159047.1;Name=WP_103159047.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804882.1;locus_tag=RM615_RS04840;product=protein translocase subunit SecDF;protein_id=WP_103159047.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 114559 114822 . - . ID=gene-RM615_RS04845;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=RM615_RS04845;old_locus_tag=RM615_04845 NZ_JAVRJW010000002.1 Protein Homology CDS 114559 114822 . - 0 ID=cds-WP_037574211.1;Parent=gene-RM615_RS04845;Dbxref=GenBank:WP_037574211.1;Name=WP_037574211.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=RM615_RS04845;product=preprotein translocase subunit YajC;protein_id=WP_037574211.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 114838 115977 . - . ID=gene-RM615_RS04850;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=RM615_RS04850;old_locus_tag=RM615_04850 NZ_JAVRJW010000002.1 Protein Homology CDS 114838 115977 . - 0 ID=cds-WP_103159048.1;Parent=gene-RM615_RS04850;Dbxref=GenBank:WP_103159048.1;Name=WP_103159048.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=RM615_RS04850;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_103159048.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 115996 117021 . - . ID=gene-RM615_RS04855;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=RM615_RS04855;old_locus_tag=RM615_04855 NZ_JAVRJW010000002.1 Protein Homology CDS 115996 117021 . - 0 ID=cds-WP_037574217.1;Parent=gene-RM615_RS04855;Dbxref=GenBank:WP_037574217.1;Name=WP_037574217.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=RM615_RS04855;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_037574217.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 117039 118034 . - . ID=gene-RM615_RS04860;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=RM615_RS04860;old_locus_tag=RM615_04860 NZ_JAVRJW010000002.1 Protein Homology CDS 117039 118034 . - 0 ID=cds-WP_037574221.1;Parent=gene-RM615_RS04860;Dbxref=GenBank:WP_037574221.1;Name=WP_037574221.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=RM615_RS04860;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_037574221.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 118048 118650 . - . ID=gene-RM615_RS04865;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=RM615_RS04865;old_locus_tag=RM615_04865 NZ_JAVRJW010000002.1 Protein Homology CDS 118048 118650 . - 0 ID=cds-WP_311539181.1;Parent=gene-RM615_RS04865;Dbxref=GenBank:WP_311539181.1;Name=WP_311539181.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=RM615_RS04865;product=Holliday junction branch migration protein RuvA;protein_id=WP_311539181.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 118663 119106 . - . ID=gene-RM615_RS04870;Name=RM615_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04870;old_locus_tag=RM615_04870 NZ_JAVRJW010000002.1 Protein Homology CDS 118663 119106 . - 0 ID=cds-WP_037574227.1;Parent=gene-RM615_RS04870;Dbxref=GenBank:WP_037574227.1;Name=WP_037574227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=RM615_RS04870;product=ACT domain-containing protein;protein_id=WP_037574227.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 119122 120411 . - . ID=gene-RM615_RS04875;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=RM615_RS04875;old_locus_tag=RM615_04875 NZ_JAVRJW010000002.1 Protein Homology CDS 119122 120411 . - 0 ID=cds-WP_037574230.1;Parent=gene-RM615_RS04875;Dbxref=GenBank:WP_037574230.1;Name=WP_037574230.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=RM615_RS04875;product=GTPase ObgE;protein_id=WP_037574230.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 120642 120926 . - . ID=gene-RM615_RS04880;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=RM615_RS04880;old_locus_tag=RM615_04880 NZ_JAVRJW010000002.1 Protein Homology CDS 120642 120926 . - 0 ID=cds-WP_037574233.1;Parent=gene-RM615_RS04880;Dbxref=GenBank:WP_037574233.1;Name=WP_037574233.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=RM615_RS04880;product=50S ribosomal protein L27;protein_id=WP_037574233.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 120937 121257 . - . ID=gene-RM615_RS04885;Name=RM615_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04885;old_locus_tag=RM615_04885 NZ_JAVRJW010000002.1 Protein Homology CDS 120937 121257 . - 0 ID=cds-WP_037574236.1;Parent=gene-RM615_RS04885;Dbxref=GenBank:WP_037574236.1;Name=WP_037574236.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=RM615_RS04885;product=ribosomal-processing cysteine protease Prp;protein_id=WP_037574236.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 121260 121568 . - . ID=gene-RM615_RS04890;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=RM615_RS04890;old_locus_tag=RM615_04890 NZ_JAVRJW010000002.1 Protein Homology CDS 121260 121568 . - 0 ID=cds-WP_037574239.1;Parent=gene-RM615_RS04890;Dbxref=GenBank:WP_037574239.1;Name=WP_037574239.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364931.1;locus_tag=RM615_RS04890;product=50S ribosomal protein L21;protein_id=WP_037574239.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch sequence_feature 121580 121652 . - . ID=id-NZ_JAVRJW010000002.1:121580..121652;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00559,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000002.1 RefSeq gene 121681 122205 . - . ID=gene-RM615_RS04895;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=RM615_RS04895;old_locus_tag=RM615_04895 NZ_JAVRJW010000002.1 Protein Homology CDS 121681 122205 . - 0 ID=cds-WP_103159049.1;Parent=gene-RM615_RS04895;Dbxref=GenBank:WP_103159049.1;Name=WP_103159049.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:NF016019.7;locus_tag=RM615_RS04895;product=rod shape-determining protein MreD;protein_id=WP_103159049.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 122202 123038 . - . ID=gene-RM615_RS04900;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=RM615_RS04900;old_locus_tag=RM615_04900 NZ_JAVRJW010000002.1 Protein Homology CDS 122202 123038 . - 0 ID=cds-WP_103159050.1;Parent=gene-RM615_RS04900;Dbxref=GenBank:WP_103159050.1;Name=WP_103159050.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=RM615_RS04900;product=rod shape-determining protein MreC;protein_id=WP_103159050.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 123442 123579 . - . ID=gene-RM615_RS04905;Name=RM615_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04905;old_locus_tag=RM615_04905 NZ_JAVRJW010000002.1 Protein Homology CDS 123442 123579 . - 0 ID=cds-WP_172458437.1;Parent=gene-RM615_RS04905;Dbxref=GenBank:WP_172458437.1;Name=WP_172458437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165137.1;locus_tag=RM615_RS04905;product=hypothetical protein;protein_id=WP_172458437.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 123653 124111 . - . ID=gene-RM615_RS04910;Name=RM615_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04910;old_locus_tag=RM615_04910 NZ_JAVRJW010000002.1 Protein Homology CDS 123653 124111 . - 0 ID=cds-WP_037574248.1;Parent=gene-RM615_RS04910;Dbxref=GenBank:WP_037574248.1;Name=WP_037574248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=RM615_RS04910;product=DUF4930 family protein;protein_id=WP_037574248.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 124452 125138 . - . ID=gene-RM615_RS04915;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=RM615_RS04915;old_locus_tag=RM615_04915 NZ_JAVRJW010000002.1 Protein Homology CDS 124452 125138 . - 0 ID=cds-WP_311540947.1;Parent=gene-RM615_RS04915;Dbxref=GenBank:WP_311540947.1;Name=WP_311540947.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729276.1;locus_tag=RM615_RS04915;product=RadC family protein;protein_id=WP_311540947.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 125138 125848 . - . ID=gene-RM615_RS04920;Name=RM615_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04920;old_locus_tag=RM615_04920 NZ_JAVRJW010000002.1 Protein Homology CDS 125138 125848 . - 0 ID=cds-WP_311540949.1;Parent=gene-RM615_RS04920;Dbxref=GenBank:WP_311540949.1;Name=WP_311540949.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=RM615_RS04920;product=prepilin peptidase;protein_id=WP_311540949.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 126018 127280 . - . ID=gene-RM615_RS04925;Name=RM615_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04925;old_locus_tag=RM615_04925 NZ_JAVRJW010000002.1 Protein Homology CDS 126018 127280 . - 0 ID=cds-WP_037574258.1;Parent=gene-RM615_RS04925;Dbxref=GenBank:WP_037574258.1;Name=WP_037574258.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510278.1;locus_tag=RM615_RS04925;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_037574258.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 127292 129922 . - . ID=gene-RM615_RS04930;Name=RM615_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04930;old_locus_tag=RM615_04930 NZ_JAVRJW010000002.1 Protein Homology CDS 127292 129922 . - 0 ID=cds-WP_103159051.1;Parent=gene-RM615_RS04930;Dbxref=GenBank:WP_103159051.1;Name=WP_103159051.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=RM615_RS04930;product=valine--tRNA ligase;protein_id=WP_103159051.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch binding_site 129963 130172 . - . ID=id-NZ_JAVRJW010000002.1:129963..130172;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000002.1 RefSeq gene 130229 130777 . + . ID=gene-RM615_RS04935;Name=RM615_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04935;old_locus_tag=RM615_04935 NZ_JAVRJW010000002.1 Protein Homology CDS 130229 130777 . + 0 ID=cds-WP_037574262.1;Parent=gene-RM615_RS04935;Dbxref=GenBank:WP_037574262.1;Name=WP_037574262.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=RM615_RS04935;product=DNA-3-methyladenine glycosylase I;protein_id=WP_037574262.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 130811 131893 . - . ID=gene-RM615_RS04940;Name=RM615_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04940;old_locus_tag=RM615_04940 NZ_JAVRJW010000002.1 Protein Homology CDS 130811 131893 . - 0 ID=cds-WP_107368014.1;Parent=gene-RM615_RS04940;Dbxref=GenBank:WP_107368014.1;Name=WP_107368014.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443295.1;locus_tag=RM615_RS04940;product=AbrB family protein;protein_id=WP_107368014.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 132056 133339 . - . ID=gene-RM615_RS04945;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=RM615_RS04945;old_locus_tag=RM615_04945 NZ_JAVRJW010000002.1 Protein Homology CDS 132056 133339 . - 0 ID=cds-WP_037574268.1;Parent=gene-RM615_RS04945;Dbxref=GenBank:WP_037574268.1;Name=WP_037574268.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458906.1;locus_tag=RM615_RS04945;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_037574268.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 133352 134329 . - . ID=gene-RM615_RS04950;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=RM615_RS04950;old_locus_tag=RM615_04950 NZ_JAVRJW010000002.1 Protein Homology CDS 133352 134329 . - 0 ID=cds-WP_037574625.1;Parent=gene-RM615_RS04950;Dbxref=GenBank:WP_037574625.1;Name=WP_037574625.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=RM615_RS04950;product=porphobilinogen synthase;protein_id=WP_037574625.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 134319 135008 . - . ID=gene-RM615_RS04955;Name=RM615_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04955;old_locus_tag=RM615_04955 NZ_JAVRJW010000002.1 Protein Homology CDS 134319 135008 . - 0 ID=cds-WP_037574271.1;Parent=gene-RM615_RS04955;Dbxref=GenBank:WP_037574271.1;Name=WP_037574271.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,obsolete protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=RM615_RS04955;product=uroporphyrinogen-III synthase;protein_id=WP_037574271.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 135019 135945 . - . ID=gene-RM615_RS04960;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=RM615_RS04960;old_locus_tag=RM615_04960 NZ_JAVRJW010000002.1 Protein Homology CDS 135019 135945 . - 0 ID=cds-WP_311539183.1;Parent=gene-RM615_RS04960;Dbxref=GenBank:WP_311539183.1;Name=WP_311539183.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500279.1;locus_tag=RM615_RS04960;product=hydroxymethylbilane synthase;protein_id=WP_311539183.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 135967 136803 . - . ID=gene-RM615_RS04965;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=RM615_RS04965;old_locus_tag=RM615_04965 NZ_JAVRJW010000002.1 Protein Homology CDS 135967 136803 . - 0 ID=cds-WP_311539184.1;Parent=gene-RM615_RS04965;Dbxref=GenBank:WP_311539184.1;Name=WP_311539184.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729282.1;locus_tag=RM615_RS04965;product=cytochrome c biogenesis protein CcsA;protein_id=WP_311539184.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 136818 138158 . - . ID=gene-RM615_RS04970;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=RM615_RS04970;old_locus_tag=RM615_04970 NZ_JAVRJW010000002.1 Protein Homology CDS 136818 138158 . - 0 ID=cds-WP_037574280.1;Parent=gene-RM615_RS04970;Dbxref=GenBank:WP_037574280.1;Name=WP_037574280.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase (NADP+) activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381867.1;locus_tag=RM615_RS04970;product=glutamyl-tRNA reductase;protein_id=WP_037574280.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 138274 138867 . - . ID=gene-RM615_RS04975;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=RM615_RS04975;old_locus_tag=RM615_04975 NZ_JAVRJW010000002.1 Protein Homology CDS 138274 138867 . - 0 ID=cds-WP_037574282.1;Parent=gene-RM615_RS04975;Dbxref=GenBank:WP_037574282.1;Name=WP_037574282.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425297.1;locus_tag=RM615_RS04975;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_037574282.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 138939 140201 . - . ID=gene-RM615_RS04980;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=RM615_RS04980;old_locus_tag=RM615_04980 NZ_JAVRJW010000002.1 Protein Homology CDS 138939 140201 . - 0 ID=cds-WP_037574285.1;Parent=gene-RM615_RS04980;Dbxref=GenBank:WP_037574285.1;Name=WP_037574285.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=RM615_RS04980;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_037574285.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 140397 141710 . - . ID=gene-RM615_RS04985;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=RM615_RS04985;old_locus_tag=RM615_04985 NZ_JAVRJW010000002.1 Protein Homology CDS 140397 141710 . - 0 ID=cds-WP_105965405.1;Parent=gene-RM615_RS04985;Dbxref=GenBank:WP_105965405.1;Name=WP_105965405.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=RM615_RS04985;product=trigger factor;protein_id=WP_105965405.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 141795 142718 . - . ID=gene-RM615_RS04990;Name=RM615_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04990;old_locus_tag=RM615_04990 NZ_JAVRJW010000002.1 Protein Homology CDS 141795 142718 . - 0 ID=cds-WP_311539185.1;Parent=gene-RM615_RS04990;Dbxref=GenBank:WP_311539185.1;Name=WP_311539185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425300.1;locus_tag=RM615_RS04990;product=hypothetical protein;protein_id=WP_311539185.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 142728 143339 . - . ID=gene-RM615_RS04995;Name=RM615_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS04995;old_locus_tag=RM615_04995 NZ_JAVRJW010000002.1 Protein Homology CDS 142728 143339 . - 0 ID=cds-WP_105965403.1;Parent=gene-RM615_RS04995;Dbxref=GenBank:WP_105965403.1;Name=WP_105965403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835437.1;locus_tag=RM615_RS04995;product=NUDIX domain-containing protein;protein_id=WP_105965403.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 143491 143847 . - . ID=gene-RM615_RS05000;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=RM615_RS05000;old_locus_tag=RM615_05000 NZ_JAVRJW010000002.1 Protein Homology CDS 143491 143847 . - 0 ID=cds-WP_037574297.1;Parent=gene-RM615_RS05000;Dbxref=GenBank:WP_037574297.1;Name=WP_037574297.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=RM615_RS05000;product=50S ribosomal protein L20;protein_id=WP_037574297.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 143902 144102 . - . ID=gene-RM615_RS05005;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=RM615_RS05005;old_locus_tag=RM615_05005 NZ_JAVRJW010000002.1 Protein Homology CDS 143902 144102 . - 0 ID=cds-WP_105962858.1;Parent=gene-RM615_RS05005;Dbxref=GenBank:WP_105962858.1;Name=WP_105962858.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=RM615_RS05005;product=50S ribosomal protein L35;protein_id=WP_105962858.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 144129 144656 . - . ID=gene-RM615_RS05010;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=RM615_RS05010;old_locus_tag=RM615_05010 NZ_JAVRJW010000002.1 Protein Homology CDS 144129 144656 . - 0 ID=cds-WP_105962892.1;Parent=gene-RM615_RS05010;Dbxref=GenBank:WP_105962892.1;Name=WP_105962892.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=RM615_RS05010;product=translation initiation factor IF-3;protein_id=WP_105962892.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch sequence_feature 144682 144816 . - . ID=id-NZ_JAVRJW010000002.1:144682..144816;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00558,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000002.1 RefSeq gene 144858 146366 . - . ID=gene-RM615_RS05015;Name=RM615_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05015;old_locus_tag=RM615_05015 NZ_JAVRJW010000002.1 Protein Homology CDS 144858 146366 . - 0 ID=cds-WP_311539186.1;Parent=gene-RM615_RS05015;Dbxref=GenBank:WP_311539186.1;Name=WP_311539186.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500292.1;locus_tag=RM615_RS05015;product=amino acid permease;protein_id=WP_311539186.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch riboswitch 146473 146647 . - . ID=id-NZ_JAVRJW010000002.1:146473..146647;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000002.1 RefSeq gene 146699 148636 . - . ID=gene-RM615_RS05020;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=RM615_RS05020;old_locus_tag=RM615_05020 NZ_JAVRJW010000002.1 Protein Homology CDS 146699 148636 . - 0 ID=cds-WP_037574303.1;Parent=gene-RM615_RS05020;Dbxref=GenBank:WP_037574303.1;Name=WP_037574303.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=RM615_RS05020;product=threonine--tRNA ligase;protein_id=WP_037574303.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 148940 149863 . - . ID=gene-RM615_RS05025;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=RM615_RS05025;old_locus_tag=RM615_05025 NZ_JAVRJW010000002.1 Protein Homology CDS 148940 149863 . - 0 ID=cds-WP_103159060.1;Parent=gene-RM615_RS05025;Dbxref=GenBank:WP_103159060.1;Name=WP_103159060.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425307.1;locus_tag=RM615_RS05025;product=primosomal protein DnaI;protein_id=WP_103159060.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 149860 151245 . - . ID=gene-RM615_RS05030;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM615_RS05030;old_locus_tag=RM615_05030 NZ_JAVRJW010000002.1 Protein Homology CDS 149860 151245 . - 0 ID=cds-WP_084276024.1;Parent=gene-RM615_RS05030;Dbxref=GenBank:WP_084276024.1;Name=WP_084276024.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=RM615_RS05030;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_084276024.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 151223 151690 . - . ID=gene-RM615_RS05035;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=RM615_RS05035;old_locus_tag=RM615_05035 NZ_JAVRJW010000002.1 Protein Homology CDS 151223 151690 . - 0 ID=cds-WP_037574309.1;Parent=gene-RM615_RS05035;Dbxref=GenBank:WP_037574309.1;Name=WP_037574309.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=RM615_RS05035;product=transcriptional regulator NrdR;protein_id=WP_037574309.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 151823 152833 . - . ID=gene-RM615_RS05040;Name=RM615_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05040;old_locus_tag=RM615_05040 NZ_JAVRJW010000002.1 Protein Homology CDS 151823 152833 . - 0 ID=cds-WP_037574312.1;Parent=gene-RM615_RS05040;Dbxref=GenBank:WP_037574312.1;Name=WP_037574312.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=RM615_RS05040;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037574312.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 153062 153667 . - . ID=gene-RM615_RS05045;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=RM615_RS05045;old_locus_tag=RM615_05045 NZ_JAVRJW010000002.1 Protein Homology CDS 153062 153667 . - 0 ID=cds-WP_037574315.1;Parent=gene-RM615_RS05045;Dbxref=GenBank:WP_037574315.1;Name=WP_037574315.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493142.1;locus_tag=RM615_RS05045;product=dephospho-CoA kinase;protein_id=WP_037574315.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 153683 154555 . - . ID=gene-RM615_RS05050;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=RM615_RS05050;old_locus_tag=RM615_05050 NZ_JAVRJW010000002.1 Protein Homology CDS 153683 154555 . - 0 ID=cds-WP_037574318.1;Parent=gene-RM615_RS05050;Dbxref=GenBank:WP_037574318.1;Name=WP_037574318.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=RM615_RS05050;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_037574318.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 154571 157198 . - . ID=gene-RM615_RS05055;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=RM615_RS05055;old_locus_tag=RM615_05055 NZ_JAVRJW010000002.1 Protein Homology CDS 154571 157198 . - 0 ID=cds-WP_311540951.1;Parent=gene-RM615_RS05055;Dbxref=GenBank:WP_311540951.1;Name=WP_311540951.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=RM615_RS05055;product=DNA polymerase I;protein_id=WP_311540951.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 157425 159125 . - . ID=gene-RM615_RS05060;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=RM615_RS05060;old_locus_tag=RM615_05060 NZ_JAVRJW010000002.1 Protein Homology CDS 157425 159125 . - 0 ID=cds-WP_037574323.1;Parent=gene-RM615_RS05060;Dbxref=GenBank:WP_037574323.1;Name=WP_037574323.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=RM615_RS05060;product=two-component system histidine kinase PnpS;protein_id=WP_037574323.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 159126 159830 . - . ID=gene-RM615_RS05065;Name=RM615_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05065;old_locus_tag=RM615_05065 NZ_JAVRJW010000002.1 Protein Homology CDS 159126 159830 . - 0 ID=cds-WP_037574326.1;Parent=gene-RM615_RS05065;Dbxref=GenBank:WP_037574326.1;Name=WP_037574326.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=RM615_RS05065;product=response regulator transcription factor;protein_id=WP_037574326.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 160170 161432 . - . ID=gene-RM615_RS05070;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=RM615_RS05070;old_locus_tag=RM615_05070 NZ_JAVRJW010000002.1 Protein Homology CDS 160170 161432 . - 0 ID=cds-WP_311540952.1;Parent=gene-RM615_RS05070;Dbxref=GenBank:WP_311540952.1;Name=WP_311540952.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613680.1;locus_tag=RM615_RS05070;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_311540952.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 161482 162603 . - . ID=gene-RM615_RS05075;Name=RM615_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05075;old_locus_tag=RM615_05075 NZ_JAVRJW010000002.1 Protein Homology CDS 161482 162603 . - 0 ID=cds-WP_105962864.1;Parent=gene-RM615_RS05075;Dbxref=GenBank:WP_105962864.1;Name=WP_105962864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502341.1;locus_tag=RM615_RS05075;product=citrate synthase;protein_id=WP_105962864.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 163001 164761 . - . ID=gene-RM615_RS05080;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=RM615_RS05080;old_locus_tag=RM615_05080 NZ_JAVRJW010000002.1 Protein Homology CDS 163001 164761 . - 0 ID=cds-WP_311540953.1;Parent=gene-RM615_RS05080;Dbxref=GenBank:WP_311540953.1;Name=WP_311540953.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=RM615_RS05080;product=pyruvate kinase;protein_id=WP_311540953.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 164778 165749 . - . ID=gene-RM615_RS05085;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=RM615_RS05085;old_locus_tag=RM615_05085 NZ_JAVRJW010000002.1 Protein Homology CDS 164778 165749 . - 0 ID=cds-WP_107359015.1;Parent=gene-RM615_RS05085;Dbxref=GenBank:WP_107359015.1;Name=WP_107359015.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=RM615_RS05085;product=6-phosphofructokinase;protein_id=WP_107359015.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 166109 167053 . - . ID=gene-RM615_RS05090;Name=RM615_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05090;old_locus_tag=RM615_05090 NZ_JAVRJW010000002.1 Protein Homology CDS 166109 167053 . - 0 ID=cds-WP_311540954.1;Parent=gene-RM615_RS05090;Dbxref=GenBank:WP_311540954.1;Name=WP_311540954.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=RM615_RS05090;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_311540954.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 167053 167913 . - . ID=gene-RM615_RS05095;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=RM615_RS05095;old_locus_tag=RM615_05095 NZ_JAVRJW010000002.1 Protein Homology CDS 167053 167913 . - 0 ID=cds-WP_103159064.1;Parent=gene-RM615_RS05095;Dbxref=GenBank:WP_103159064.1;Name=WP_103159064.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440197.1;locus_tag=RM615_RS05095;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_103159064.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 167950 169179 . - . ID=gene-RM615_RS05100;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=RM615_RS05100;old_locus_tag=RM615_05100 NZ_JAVRJW010000002.1 Protein Homology CDS 167950 169179 . - 0 ID=cds-WP_105962868.1;Parent=gene-RM615_RS05100;Dbxref=GenBank:WP_105962868.1;Name=WP_105962868.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500315.1;locus_tag=RM615_RS05100;product=NADP-dependent malic enzyme;protein_id=WP_105962868.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 169297 172494 . - . ID=gene-RM615_RS05105;Name=RM615_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05105;old_locus_tag=RM615_05105 NZ_JAVRJW010000002.1 Protein Homology CDS 169297 172494 . - 0 ID=cds-WP_107370228.1;Parent=gene-RM615_RS05105;Dbxref=GenBank:WP_107370228.1;Name=WP_107370228.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613673.1;locus_tag=RM615_RS05105;product=DNA polymerase III subunit alpha;protein_id=WP_107370228.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 172519 173454 . - . ID=gene-RM615_RS05110;Name=RM615_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05110;old_locus_tag=RM615_05110 NZ_JAVRJW010000002.1 Protein Homology CDS 172519 173454 . - 0 ID=cds-WP_311540955.1;Parent=gene-RM615_RS05110;Dbxref=GenBank:WP_311540955.1;Name=WP_311540955.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665952.1;locus_tag=RM615_RS05110;product=DHH family phosphoesterase;protein_id=WP_311540955.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 173468 174763 . - . ID=gene-RM615_RS05115;Name=RM615_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05115;old_locus_tag=RM615_05115 NZ_JAVRJW010000002.1 Protein Homology CDS 173468 174763 . - 0 ID=cds-WP_103159068.1;Parent=gene-RM615_RS05115;Dbxref=GenBank:WP_103159068.1;Name=WP_103159068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=RM615_RS05115;product=DRTGG domain-containing protein;protein_id=WP_103159068.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 174949 175362 . + . ID=gene-RM615_RS05120;Name=RM615_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05120;old_locus_tag=RM615_05120 NZ_JAVRJW010000002.1 Protein Homology CDS 174949 175362 . + 0 ID=cds-WP_037574634.1;Parent=gene-RM615_RS05120;Dbxref=GenBank:WP_037574634.1;Name=WP_037574634.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=RM615_RS05120;product=universal stress protein;protein_id=WP_037574634.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 175518 176213 . - . ID=gene-RM615_RS05125;Name=RM615_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05125;old_locus_tag=RM615_05125 NZ_JAVRJW010000002.1 Protein Homology CDS 175518 176213 . - 0 ID=cds-WP_037574354.1;Parent=gene-RM615_RS05125;Dbxref=GenBank:WP_037574354.1;Name=WP_037574354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503615.1;locus_tag=RM615_RS05125;product=metal-dependent hydrolase;protein_id=WP_037574354.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 176336 177391 . + . ID=gene-RM615_RS05130;Name=RM615_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05130;old_locus_tag=RM615_05130 NZ_JAVRJW010000002.1 Protein Homology CDS 176336 177391 . + 0 ID=cds-WP_037574355.1;Parent=gene-RM615_RS05130;Dbxref=GenBank:WP_037574355.1;Name=WP_037574355.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=RM615_RS05130;product=M24 family metallopeptidase;protein_id=WP_037574355.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 177469 178584 . - . ID=gene-RM615_RS05135;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=RM615_RS05135;old_locus_tag=RM615_05135 NZ_JAVRJW010000002.1 Protein Homology CDS 177469 178584 . - 0 ID=cds-WP_103159070.1;Parent=gene-RM615_RS05135;Dbxref=GenBank:WP_103159070.1;Name=WP_103159070.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500323.1;locus_tag=RM615_RS05135;product=alanine dehydrogenase;protein_id=WP_103159070.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 178732 179232 . + . ID=gene-RM615_RS05140;Name=RM615_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05140;old_locus_tag=RM615_05140 NZ_JAVRJW010000002.1 Protein Homology CDS 178732 179232 . + 0 ID=cds-WP_037574358.1;Parent=gene-RM615_RS05140;Dbxref=GenBank:WP_037574358.1;Name=WP_037574358.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=RM615_RS05140;product=universal stress protein;protein_id=WP_037574358.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 179429 180625 . - . ID=gene-RM615_RS05145;Name=RM615_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05145;old_locus_tag=RM615_05145 NZ_JAVRJW010000002.1 Protein Homology CDS 179429 180625 . - 0 ID=cds-WP_037574360.1;Parent=gene-RM615_RS05145;Dbxref=GenBank:WP_037574360.1;Name=WP_037574360.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275513.1;locus_tag=RM615_RS05145;product=acetate kinase;protein_id=WP_037574360.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 180707 181654 . - . ID=gene-RM615_RS05150;Name=RM615_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05150;old_locus_tag=RM615_05150 NZ_JAVRJW010000002.1 Protein Homology CDS 180707 181654 . - 0 ID=cds-WP_107370227.1;Parent=gene-RM615_RS05150;Dbxref=GenBank:WP_107370227.1;Name=WP_107370227.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832682.1;locus_tag=RM615_RS05150;product=class I SAM-dependent methyltransferase;protein_id=WP_107370227.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 181726 182220 . - . ID=gene-RM615_RS05155;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=RM615_RS05155;old_locus_tag=RM615_05155 NZ_JAVRJW010000002.1 Protein Homology CDS 181726 182220 . - 0 ID=cds-WP_037574364.1;Parent=gene-RM615_RS05155;Dbxref=GenBank:WP_037574364.1;Name=WP_037574364.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275511.1;locus_tag=RM615_RS05155;product=thiol peroxidase;protein_id=WP_037574364.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 182310 183083 . - . ID=gene-RM615_RS05160;Name=RM615_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05160;old_locus_tag=RM615_05160 NZ_JAVRJW010000002.1 Protein Homology CDS 182310 183083 . - 0 ID=cds-WP_037574367.1;Parent=gene-RM615_RS05160;Dbxref=GenBank:WP_037574367.1;Name=WP_037574367.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500328.1;locus_tag=RM615_RS05160;product=sulfite exporter TauE/SafE family protein;protein_id=WP_037574367.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 183104 184324 . - . ID=gene-RM615_RS05165;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=RM615_RS05165;old_locus_tag=RM615_05165 NZ_JAVRJW010000002.1 Protein Homology CDS 183104 184324 . - 0 ID=cds-WP_037574369.1;Parent=gene-RM615_RS05165;Dbxref=GenBank:WP_037574369.1;Name=WP_037574369.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474712.1;locus_tag=RM615_RS05165;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_037574369.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 184321 185457 . - . ID=gene-RM615_RS05170;Name=RM615_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05170;old_locus_tag=RM615_05170 NZ_JAVRJW010000002.1 Protein Homology CDS 184321 185457 . - 0 ID=cds-WP_103159166.1;Parent=gene-RM615_RS05170;Dbxref=GenBank:WP_103159166.1;Name=WP_103159166.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=RM615_RS05170;product=cysteine desulfurase family protein;protein_id=WP_103159166.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 185734 187434 . - . ID=gene-RM615_RS05175;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=RM615_RS05175;old_locus_tag=RM615_05175 NZ_JAVRJW010000002.1 Protein Homology CDS 185734 187434 . - 0 ID=cds-WP_311540957.1;Parent=gene-RM615_RS05175;Dbxref=GenBank:WP_311540957.1;Name=WP_311540957.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425340.1;locus_tag=RM615_RS05175;product=septation ring formation regulator EzrA;protein_id=WP_311540957.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 187604 188059 . + . ID=gene-RM615_RS05180;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=RM615_RS05180;old_locus_tag=RM615_05180 NZ_JAVRJW010000002.1 Protein Homology CDS 187604 188059 . + 0 ID=cds-WP_311540958.1;Parent=gene-RM615_RS05180;Dbxref=GenBank:WP_311540958.1;Name=WP_311540958.1;Note=Replaces NBR011098.;Ontology_term=GO:0033745;gbkey=CDS;gene=msrC;go_function=L-methionine (R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613655.1;locus_tag=RM615_RS05180;product=free L-methionine (R)-S-oxide reductase MsrC;protein_id=WP_311540958.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 188287 188889 . + . ID=gene-RM615_RS05185;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=RM615_RS05185;old_locus_tag=RM615_05185 NZ_JAVRJW010000002.1 Protein Homology CDS 188287 188889 . + 0 ID=cds-WP_103159168.1;Parent=gene-RM615_RS05185;Dbxref=GenBank:WP_103159168.1;Name=WP_103159168.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=RM615_RS05185;product=30S ribosomal protein S4;protein_id=WP_103159168.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 189058 190017 . + . ID=gene-RM615_RS05190;Name=RM615_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05190;old_locus_tag=RM615_05190 NZ_JAVRJW010000002.1 Protein Homology CDS 189058 190017 . + 0 ID=cds-WP_311540959.1;Parent=gene-RM615_RS05190;Dbxref=GenBank:WP_311540959.1;Name=WP_311540959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766912.1;locus_tag=RM615_RS05190;product=ornithine cyclodeaminase family protein;protein_id=WP_311540959.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 190148 190891 . - . ID=gene-RM615_RS05195;Name=RM615_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05195;old_locus_tag=RM615_05195 NZ_JAVRJW010000002.1 Protein Homology CDS 190148 190891 . - 0 ID=cds-WP_103159170.1;Parent=gene-RM615_RS05195;Dbxref=GenBank:WP_103159170.1;Name=WP_103159170.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176108.1;locus_tag=RM615_RS05195;product=glycerophosphodiester phosphodiesterase;protein_id=WP_103159170.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 190968 191414 . + . ID=gene-RM615_RS05200;Name=RM615_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05200;old_locus_tag=RM615_05200 NZ_JAVRJW010000002.1 Protein Homology CDS 190968 191414 . + 0 ID=cds-WP_103159171.1;Parent=gene-RM615_RS05200;Dbxref=GenBank:WP_103159171.1;Name=WP_103159171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=RM615_RS05200;product=SACOL1771 family peroxiredoxin;protein_id=WP_103159171.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 191504 192664 . + . ID=gene-RM615_RS05205;Name=RM615_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05205;old_locus_tag=RM615_05205 NZ_JAVRJW010000002.1 Protein Homology CDS 191504 192664 . + 0 ID=cds-WP_103159172.1;Parent=gene-RM615_RS05205;Dbxref=GenBank:WP_103159172.1;Name=WP_103159172.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=RM615_RS05205;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_103159172.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 192654 194246 . + . ID=gene-RM615_RS05210;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=RM615_RS05210;old_locus_tag=RM615_05210 NZ_JAVRJW010000002.1 Protein Homology CDS 192654 194246 . + 0 ID=cds-WP_311540978.1;Parent=gene-RM615_RS05210;Dbxref=GenBank:WP_311540978.1;Name=WP_311540978.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500339.1;locus_tag=RM615_RS05210;product=phosphoglycerate dehydrogenase;protein_id=WP_311540978.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 194386 195513 . - . ID=gene-RM615_RS05215;Name=RM615_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05215;old_locus_tag=RM615_05215 NZ_JAVRJW010000002.1 Protein Homology CDS 194386 195513 . - 0 ID=cds-WP_037574387.1;Parent=gene-RM615_RS05215;Dbxref=GenBank:WP_037574387.1;Name=WP_037574387.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=RM615_RS05215;product=HAD family hydrolase;protein_id=WP_037574387.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 195717 196334 . - . ID=gene-RM615_RS05220;Name=RM615_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05220;old_locus_tag=RM615_05220 NZ_JAVRJW010000002.1 Protein Homology CDS 195717 196334 . - 0 ID=cds-WP_105962874.1;Parent=gene-RM615_RS05220;Dbxref=GenBank:WP_105962874.1;Name=WP_105962874.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467413.1;locus_tag=RM615_RS05220;product=lysophospholipid acyltransferase family protein;protein_id=WP_105962874.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 196489 197718 . + . ID=gene-RM615_RS05225;Name=RM615_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05225;old_locus_tag=RM615_05225 NZ_JAVRJW010000002.1 Protein Homology CDS 196489 197718 . + 0 ID=cds-WP_051604965.1;Parent=gene-RM615_RS05225;Dbxref=GenBank:WP_051604965.1;Name=WP_051604965.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507328.1;locus_tag=RM615_RS05225;product=S1C family serine protease;protein_id=WP_051604965.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 197767 199029 . - . ID=gene-RM615_RS05230;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=RM615_RS05230;old_locus_tag=RM615_05230 NZ_JAVRJW010000002.1 Protein Homology CDS 197767 199029 . - 0 ID=cds-WP_037574392.1;Parent=gene-RM615_RS05230;Dbxref=GenBank:WP_037574392.1;Name=WP_037574392.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=RM615_RS05230;product=tyrosine--tRNA ligase;protein_id=WP_037574392.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 199440 200261 . + . ID=gene-RM615_RS05235;Name=RM615_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05235;old_locus_tag=RM615_05235 NZ_JAVRJW010000002.1 Protein Homology CDS 199440 200261 . + 0 ID=cds-WP_084276034.1;Parent=gene-RM615_RS05235;Dbxref=GenBank:WP_084276034.1;Name=WP_084276034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467399.1;locus_tag=RM615_RS05235;product=transglycosylase domain-containing protein;protein_id=WP_084276034.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 200416 202083 . - . ID=gene-RM615_RS05240;Name=RM615_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05240;old_locus_tag=RM615_05240 NZ_JAVRJW010000002.1 Protein Homology CDS 200416 202083 . - 0 ID=cds-WP_037574397.1;Parent=gene-RM615_RS05240;Dbxref=GenBank:WP_037574397.1;Name=WP_037574397.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=RM615_RS05240;product=formate--tetrahydrofolate ligase;protein_id=WP_037574397.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 202515 204224 . - . ID=gene-RM615_RS05245;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=RM615_RS05245;old_locus_tag=RM615_05245 NZ_JAVRJW010000002.1 Protein Homology CDS 202515 204224 . - 0 ID=cds-WP_105965382.1;Parent=gene-RM615_RS05245;Dbxref=GenBank:WP_105965382.1;Name=WP_105965382.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=RM615_RS05245;product=acetate--CoA ligase;protein_id=WP_105965382.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 204379 205011 . + . ID=gene-RM615_RS05250;Name=RM615_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05250;old_locus_tag=RM615_05250 NZ_JAVRJW010000002.1 Protein Homology CDS 204379 205011 . + 0 ID=cds-WP_107363387.1;Parent=gene-RM615_RS05250;Dbxref=GenBank:WP_107363387.1;Name=WP_107363387.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=RM615_RS05250;product=GNAT family N-acetyltransferase;protein_id=WP_107363387.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 205027 206181 . + . ID=gene-RM615_RS05255;Name=RM615_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05255;old_locus_tag=RM615_05255 NZ_JAVRJW010000002.1 Protein Homology CDS 205027 206181 . + 0 ID=cds-WP_107360614.1;Parent=gene-RM615_RS05255;Dbxref=GenBank:WP_107360614.1;Name=WP_107360614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900585.1;locus_tag=RM615_RS05255;product=acetoin utilization protein AcuC;protein_id=WP_107360614.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 206297 207289 . - . ID=gene-RM615_RS05260;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=RM615_RS05260;old_locus_tag=RM615_05260 NZ_JAVRJW010000002.1 Protein Homology CDS 206297 207289 . - 0 ID=cds-WP_037574406.1;Parent=gene-RM615_RS05260;Dbxref=GenBank:WP_037574406.1;Name=WP_037574406.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=RM615_RS05260;product=catabolite control protein A;protein_id=WP_037574406.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 207494 208585 . - . ID=gene-RM615_RS05265;Name=RM615_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05265;old_locus_tag=RM615_05265 NZ_JAVRJW010000002.1 Protein Homology CDS 207494 208585 . - 0 ID=cds-WP_037574409.1;Parent=gene-RM615_RS05265;Dbxref=GenBank:WP_037574409.1;Name=WP_037574409.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=RM615_RS05265;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_037574409.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 208856 209791 . - . ID=gene-RM615_RS05270;Name=RM615_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05270;old_locus_tag=RM615_05270 NZ_JAVRJW010000002.1 Protein Homology CDS 208856 209791 . - 0 ID=cds-WP_311540960.1;Parent=gene-RM615_RS05270;Dbxref=GenBank:WP_311540960.1;Name=WP_311540960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729328.1;locus_tag=RM615_RS05270;product=hypothetical protein;protein_id=WP_311540960.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq pseudogene 210155 210631 . - . ID=gene-RM615_RS05275;Name=RM615_RS05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS05275;old_locus_tag=RM615_05275;partial=true;pseudo=true;start_range=.,210155 NZ_JAVRJW010000002.1 Protein Homology CDS 210155 210631 . - 0 ID=cds-RM615_RS05275;Parent=gene-RM615_RS05275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500359.1;locus_tag=RM615_RS05275;partial=true;product=DUF948 domain-containing protein;pseudo=true;start_range=.,210155;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 210708 212021 . - . ID=gene-RM615_RS05280;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=RM615_RS05280;old_locus_tag=RM615_05280 NZ_JAVRJW010000002.1 Protein Homology CDS 210708 212021 . - 0 ID=cds-WP_107371852.1;Parent=gene-RM615_RS05280;Dbxref=GenBank:WP_107371852.1;Name=WP_107371852.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500360.1;locus_tag=RM615_RS05280;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_107371852.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 212044 215361 . - . ID=gene-RM615_RS05285;Name=RM615_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05285;old_locus_tag=RM615_05285 NZ_JAVRJW010000002.1 Protein Homology CDS 212044 215361 . - 0 ID=cds-WP_311540961.1;Parent=gene-RM615_RS05285;Dbxref=GenBank:WP_311540961.1;Name=WP_311540961.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=RM615_RS05285;product=DNA translocase FtsK;protein_id=WP_311540961.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 215376 215975 . - . ID=gene-RM615_RS05290;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=RM615_RS05290;old_locus_tag=RM615_05290 NZ_JAVRJW010000002.1 Protein Homology CDS 215376 215975 . - 0 ID=cds-WP_165806081.1;Parent=gene-RM615_RS05290;Dbxref=GenBank:WP_165806081.1;Name=WP_165806081.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=RM615_RS05290;product=YtpR family tRNA-binding protein;protein_id=WP_165806081.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 215984 216844 . - . ID=gene-RM615_RS05295;Name=RM615_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05295;old_locus_tag=RM615_05295 NZ_JAVRJW010000002.1 Protein Homology CDS 215984 216844 . - 0 ID=cds-WP_105965375.1;Parent=gene-RM615_RS05295;Dbxref=GenBank:WP_105965375.1;Name=WP_105965375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=RM615_RS05295;product=DUF1444 domain-containing protein;protein_id=WP_105965375.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 216937 217245 . - . ID=gene-RM615_RS05300;Name=RM615_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05300;old_locus_tag=RM615_05300 NZ_JAVRJW010000002.1 Protein Homology CDS 216937 217245 . - 0 ID=cds-WP_037574424.1;Parent=gene-RM615_RS05300;Dbxref=GenBank:WP_037574424.1;Name=WP_037574424.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471204.1;locus_tag=RM615_RS05300;product=thioredoxin family protein;protein_id=WP_037574424.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 217259 218338 . - . ID=gene-RM615_RS05305;Name=RM615_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05305;old_locus_tag=RM615_05305 NZ_JAVRJW010000002.1 Protein Homology CDS 217259 218338 . - 0 ID=cds-WP_375712997.1;Parent=gene-RM615_RS05305;Dbxref=GenBank:WP_375712997.1;Name=WP_375712997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507312.1;locus_tag=RM615_RS05305;product=M42 family metallopeptidase;protein_id=WP_375712997.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 218421 218738 . + . ID=gene-RM615_RS05310;Name=RM615_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05310;old_locus_tag=RM615_05310 NZ_JAVRJW010000002.1 Protein Homology CDS 218421 218738 . + 0 ID=cds-WP_105965374.1;Parent=gene-RM615_RS05310;Dbxref=GenBank:WP_105965374.1;Name=WP_105965374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=RM615_RS05310;product=hypothetical protein;protein_id=WP_105965374.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 218902 219747 . - . ID=gene-RM615_RS05315;Name=RM615_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05315;old_locus_tag=RM615_05315 NZ_JAVRJW010000002.1 Protein Homology CDS 218902 219747 . - 0 ID=cds-WP_037574431.1;Parent=gene-RM615_RS05315;Dbxref=GenBank:WP_037574431.1;Name=WP_037574431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500367.1;locus_tag=RM615_RS05315;product=YtnP family quorum-quenching lactonase;protein_id=WP_037574431.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 219834 220499 . - . ID=gene-RM615_RS05320;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=RM615_RS05320;old_locus_tag=RM615_05320 NZ_JAVRJW010000002.1 Protein Homology CDS 219834 220499 . - 0 ID=cds-WP_037574434.1;Parent=gene-RM615_RS05320;Dbxref=GenBank:WP_037574434.1;Name=WP_037574434.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168407.1;locus_tag=RM615_RS05320;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_037574434.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 220514 221305 . - . ID=gene-RM615_RS05325;Name=RM615_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05325;old_locus_tag=RM615_05325 NZ_JAVRJW010000002.1 Protein Homology CDS 220514 221305 . - 0 ID=cds-WP_037574436.1;Parent=gene-RM615_RS05325;Dbxref=GenBank:WP_037574436.1;Name=WP_037574436.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=RM615_RS05325;product=phosphotransferase family protein;protein_id=WP_037574436.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 221536 222384 . - . ID=gene-RM615_RS05330;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=RM615_RS05330;old_locus_tag=RM615_05330 NZ_JAVRJW010000002.1 Protein Homology CDS 221536 222384 . - 0 ID=cds-WP_037574439.1;Parent=gene-RM615_RS05330;Dbxref=GenBank:WP_037574439.1;Name=WP_037574439.1;Ontology_term=GO:0042853,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510191.1;locus_tag=RM615_RS05330;product=D-amino-acid transaminase;protein_id=WP_037574439.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 222386 223795 . - . ID=gene-RM615_RS05335;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=RM615_RS05335;old_locus_tag=RM615_05335 NZ_JAVRJW010000002.1 Protein Homology CDS 222386 223795 . - 0 ID=cds-WP_311540963.1;Parent=gene-RM615_RS05335;Dbxref=GenBank:WP_311540963.1;Name=WP_311540963.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=RM615_RS05335;product=dipeptidase PepV;protein_id=WP_311540963.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 223977 224396 . - . ID=gene-RM615_RS05340;Name=RM615_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05340;old_locus_tag=RM615_05340 NZ_JAVRJW010000002.1 Protein Homology CDS 223977 224396 . - 0 ID=cds-WP_037574442.1;Parent=gene-RM615_RS05340;Dbxref=GenBank:WP_037574442.1;Name=WP_037574442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464301.1;locus_tag=RM615_RS05340;product=hypothetical protein;protein_id=WP_037574442.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 224503 225219 . - . ID=gene-RM615_RS05345;Name=RM615_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05345;old_locus_tag=RM615_05345 NZ_JAVRJW010000002.1 Protein Homology CDS 224503 225219 . - 0 ID=cds-WP_037574445.1;Parent=gene-RM615_RS05345;Dbxref=GenBank:WP_037574445.1;Name=WP_037574445.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507304.1;locus_tag=RM615_RS05345;product=pseudouridine synthase;protein_id=WP_037574445.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 225219 226859 . - . ID=gene-RM615_RS05350;Name=RM615_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05350;old_locus_tag=RM615_05350 NZ_JAVRJW010000002.1 Protein Homology CDS 225219 226859 . - 0 ID=cds-WP_037574447.1;Parent=gene-RM615_RS05350;Dbxref=GenBank:WP_037574447.1;Name=WP_037574447.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381978.1;locus_tag=RM615_RS05350;product=putative polysaccharide biosynthesis protein;protein_id=WP_037574447.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 226976 228238 . + . ID=gene-RM615_RS05355;Name=RM615_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05355;old_locus_tag=RM615_05355 NZ_JAVRJW010000002.1 Protein Homology CDS 226976 228238 . + 0 ID=cds-WP_037574448.1;Parent=gene-RM615_RS05355;Dbxref=GenBank:WP_037574448.1;Name=WP_037574448.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500375.1;locus_tag=RM615_RS05355;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037574448.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 228504 228815 . - . ID=gene-RM615_RS05360;Name=RM615_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05360;old_locus_tag=RM615_05360 NZ_JAVRJW010000002.1 Protein Homology CDS 228504 228815 . - 0 ID=cds-WP_311540964.1;Parent=gene-RM615_RS05360;Dbxref=GenBank:WP_311540964.1;Name=WP_311540964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166097.1;locus_tag=RM615_RS05360;product=rhodanese-like domain-containing protein;protein_id=WP_311540964.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 228842 231280 . - . ID=gene-RM615_RS05365;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=RM615_RS05365;old_locus_tag=RM615_05365 NZ_JAVRJW010000002.1 Protein Homology CDS 228842 231280 . - 0 ID=cds-WP_311540965.1;Parent=gene-RM615_RS05365;Dbxref=GenBank:WP_311540965.1;Name=WP_311540965.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=RM615_RS05365;product=leucine--tRNA ligase;protein_id=WP_311540965.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch binding_site 231300 231483 . - . ID=id-NZ_JAVRJW010000002.1:231300..231483;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000002.1 RefSeq gene 231615 232796 . - . ID=gene-RM615_RS05370;Name=RM615_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05370;old_locus_tag=RM615_05370 NZ_JAVRJW010000002.1 Protein Homology CDS 231615 232796 . - 0 ID=cds-WP_037574457.1;Parent=gene-RM615_RS05370;Dbxref=GenBank:WP_037574457.1;Name=WP_037574457.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425383.1;locus_tag=RM615_RS05370;product=MDR family MFS transporter;protein_id=WP_037574457.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 232908 233867 . + . ID=gene-RM615_RS05375;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=RM615_RS05375;old_locus_tag=RM615_05375 NZ_JAVRJW010000002.1 Protein Homology CDS 232908 233867 . + 0 ID=cds-WP_037574460.1;Parent=gene-RM615_RS05375;Dbxref=GenBank:WP_037574460.1;Name=WP_037574460.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443468.1;locus_tag=RM615_RS05375;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_037574460.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 233864 234436 . + . ID=gene-RM615_RS05380;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=RM615_RS05380;old_locus_tag=RM615_05380 NZ_JAVRJW010000002.1 Protein Homology CDS 233864 234436 . + 0 ID=cds-WP_037574463.1;Parent=gene-RM615_RS05380;Dbxref=GenBank:WP_037574463.1;Name=WP_037574463.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613607.1;locus_tag=RM615_RS05380;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_037574463.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 234554 234964 . - . ID=gene-RM615_RS05385;Name=RM615_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05385;old_locus_tag=RM615_05385 NZ_JAVRJW010000002.1 Protein Homology CDS 234554 234964 . - 0 ID=cds-WP_037574466.1;Parent=gene-RM615_RS05385;Dbxref=GenBank:WP_037574466.1;Name=WP_037574466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381988.1;locus_tag=RM615_RS05385;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037574466.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 235109 236065 . - . ID=gene-RM615_RS05390;Name=RM615_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05390;old_locus_tag=RM615_05390 NZ_JAVRJW010000002.1 Protein Homology CDS 235109 236065 . - 0 ID=cds-WP_103158785.1;Parent=gene-RM615_RS05390;Dbxref=GenBank:WP_103158785.1;Name=WP_103158785.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425387.1;locus_tag=RM615_RS05390;product=L-lactate dehydrogenase;protein_id=WP_103158785.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 236186 237007 . - . ID=gene-RM615_RS05395;Name=RM615_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05395;old_locus_tag=RM615_05395 NZ_JAVRJW010000002.1 Protein Homology CDS 236186 237007 . - 0 ID=cds-WP_037574472.1;Parent=gene-RM615_RS05395;Dbxref=GenBank:WP_037574472.1;Name=WP_037574472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=RM615_RS05395;product=alpha/beta fold hydrolase;protein_id=WP_037574472.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 237205 237537 . - . ID=gene-RM615_RS05400;Name=RM615_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05400;old_locus_tag=RM615_05400 NZ_JAVRJW010000002.1 Protein Homology CDS 237205 237537 . - 0 ID=cds-WP_037574475.1;Parent=gene-RM615_RS05400;Dbxref=GenBank:WP_037574475.1;Name=WP_037574475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425389.1;locus_tag=RM615_RS05400;product=hypothetical protein;protein_id=WP_037574475.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 237752 237886 . + . ID=gene-RM615_RS05405;Name=RM615_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05405;old_locus_tag=RM615_05405 NZ_JAVRJW010000002.1 GeneMarkS-2+ CDS 237752 237886 . + 0 ID=cds-WP_255201402.1;Parent=gene-RM615_RS05405;Dbxref=GenBank:WP_255201402.1;Name=WP_255201402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS05405;product=hypothetical protein;protein_id=WP_255201402.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 238065 239111 . + . ID=gene-RM615_RS05410;Name=RM615_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05410;old_locus_tag=RM615_05410 NZ_JAVRJW010000002.1 Protein Homology CDS 238065 239111 . + 0 ID=cds-WP_084276030.1;Parent=gene-RM615_RS05410;Dbxref=GenBank:WP_084276030.1;Name=WP_084276030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166088.1;locus_tag=RM615_RS05410;product=proline dehydrogenase family protein;protein_id=WP_084276030.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 239321 239779 . - . ID=gene-RM615_RS05415;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=RM615_RS05415;old_locus_tag=RM615_05415 NZ_JAVRJW010000002.1 Protein Homology CDS 239321 239779 . - 0 ID=cds-WP_105965367.1;Parent=gene-RM615_RS05415;Dbxref=GenBank:WP_105965367.1;Name=WP_105965367.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425392.1;locus_tag=RM615_RS05415;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_105965367.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 239797 240978 . - . ID=gene-RM615_RS05420;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=RM615_RS05420;old_locus_tag=RM615_05420 NZ_JAVRJW010000002.1 Protein Homology CDS 239797 240978 . - 0 ID=cds-WP_311540966.1;Parent=gene-RM615_RS05420;Dbxref=GenBank:WP_311540966.1;Name=WP_311540966.1;Ontology_term=GO:0009231,GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=RM615_RS05420;product=GTP cyclohydrolase II;protein_id=WP_311540966.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 240992 241621 . - . ID=gene-RM615_RS05425;Name=RM615_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05425;old_locus_tag=RM615_05425 NZ_JAVRJW010000002.1 Protein Homology CDS 240992 241621 . - 0 ID=cds-WP_037574483.1;Parent=gene-RM615_RS05425;Dbxref=GenBank:WP_037574483.1;Name=WP_037574483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=RM615_RS05425;product=riboflavin synthase;protein_id=WP_037574483.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 241626 242672 . - . ID=gene-RM615_RS05430;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=RM615_RS05430;old_locus_tag=RM615_05430 NZ_JAVRJW010000002.1 Protein Homology CDS 241626 242672 . - 0 ID=cds-WP_107366670.1;Parent=gene-RM615_RS05430;Dbxref=GenBank:WP_107366670.1;Name=WP_107366670.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165958.1;locus_tag=RM615_RS05430;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_107366670.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch riboswitch 242818 242947 . - . ID=id-NZ_JAVRJW010000002.1:242818..242947;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000002.1 RefSeq gene 243062 244690 . - . ID=gene-RM615_RS05435;Name=RM615_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05435;old_locus_tag=RM615_05435 NZ_JAVRJW010000002.1 Protein Homology CDS 243062 244690 . - 0 ID=cds-WP_105965364.1;Parent=gene-RM615_RS05435;Dbxref=GenBank:WP_105965364.1;Name=WP_105965364.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425396.1;locus_tag=RM615_RS05435;product=FAD/NAD(P)-binding protein;protein_id=WP_105965364.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 245222 246088 . - . ID=gene-RM615_RS05440;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=RM615_RS05440;old_locus_tag=RM615_05440 NZ_JAVRJW010000002.1 Protein Homology CDS 245222 246088 . - 0 ID=cds-WP_037574490.1;Parent=gene-RM615_RS05440;Dbxref=GenBank:WP_037574490.1;Name=WP_037574490.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=RM615_RS05440;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_037574490.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 246251 246475 . - . ID=gene-RM615_RS05445;Name=RM615_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05445;old_locus_tag=RM615_05445 NZ_JAVRJW010000002.1 Protein Homology CDS 246251 246475 . - 0 ID=cds-WP_037574491.1;Parent=gene-RM615_RS05445;Dbxref=GenBank:WP_037574491.1;Name=WP_037574491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468074.1;locus_tag=RM615_RS05445;product=hypothetical protein;protein_id=WP_037574491.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 246671 247138 . + . ID=gene-RM615_RS05450;Name=RM615_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05450;old_locus_tag=RM615_05450 NZ_JAVRJW010000002.1 Protein Homology CDS 246671 247138 . + 0 ID=cds-WP_103158790.1;Parent=gene-RM615_RS05450;Dbxref=GenBank:WP_103158790.1;Name=WP_103158790.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=RM615_RS05450;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_103158790.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 247156 247584 . + . ID=gene-RM615_RS05455;Name=RM615_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05455;old_locus_tag=RM615_05455 NZ_JAVRJW010000002.1 Protein Homology CDS 247156 247584 . + 0 ID=cds-WP_037574495.1;Parent=gene-RM615_RS05455;Dbxref=GenBank:WP_037574495.1;Name=WP_037574495.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF018087.7;locus_tag=RM615_RS05455;product=competence protein ComK;protein_id=WP_037574495.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 247564 248016 . - . ID=gene-RM615_RS05460;Name=RM615_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05460;old_locus_tag=RM615_05460 NZ_JAVRJW010000002.1 GeneMarkS-2+ CDS 247564 248016 . - 0 ID=cds-WP_037574497.1;Parent=gene-RM615_RS05460;Dbxref=GenBank:WP_037574497.1;Name=WP_037574497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS05460;product=hypothetical protein;protein_id=WP_037574497.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 248117 248827 . - . ID=gene-RM615_RS05465;Name=RM615_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05465;old_locus_tag=RM615_05465 NZ_JAVRJW010000002.1 Protein Homology CDS 248117 248827 . - 0 ID=cds-WP_037574499.1;Parent=gene-RM615_RS05465;Dbxref=GenBank:WP_037574499.1;Name=WP_037574499.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=RM615_RS05465;product=transaldolase;protein_id=WP_037574499.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 248977 249279 . + . ID=gene-RM615_RS05470;Name=RM615_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05470;old_locus_tag=RM615_05470 NZ_JAVRJW010000002.1 Protein Homology CDS 248977 249279 . + 0 ID=cds-WP_037574501.1;Parent=gene-RM615_RS05470;Dbxref=GenBank:WP_037574501.1;Name=WP_037574501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=RM615_RS05470;product=hypothetical protein;protein_id=WP_037574501.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 249297 249662 . + . ID=gene-RM615_RS05475;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=RM615_RS05475;old_locus_tag=RM615_05475 NZ_JAVRJW010000002.1 Protein Homology CDS 249297 249662 . + 0 ID=cds-WP_105965361.1;Parent=gene-RM615_RS05475;Dbxref=GenBank:WP_105965361.1;Name=WP_105965361.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507277.1;locus_tag=RM615_RS05475;product=fluoride efflux transporter CrcB;protein_id=WP_105965361.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 249659 250033 . + . ID=gene-RM615_RS05480;Name=RM615_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05480;old_locus_tag=RM615_05480 NZ_JAVRJW010000002.1 Protein Homology CDS 249659 250033 . + 0 ID=cds-WP_037574506.1;Parent=gene-RM615_RS05480;Dbxref=GenBank:WP_037574506.1;Name=WP_037574506.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014584.7;locus_tag=RM615_RS05480;product=fluoride efflux transporter FluC;protein_id=WP_037574506.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 250165 251001 . - . ID=gene-RM615_RS05485;Name=RM615_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05485;old_locus_tag=RM615_05485 NZ_JAVRJW010000002.1 Protein Homology CDS 250165 251001 . - 0 ID=cds-WP_103158792.1;Parent=gene-RM615_RS05485;Dbxref=GenBank:WP_103158792.1;Name=WP_103158792.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=RM615_RS05485;product=aldo/keto reductase;protein_id=WP_103158792.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 251251 252159 . - . ID=gene-RM615_RS05490;Name=RM615_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05490;old_locus_tag=RM615_05490 NZ_JAVRJW010000002.1 Protein Homology CDS 251251 252159 . - 0 ID=cds-WP_311540967.1;Parent=gene-RM615_RS05490;Dbxref=GenBank:WP_311540967.1;Name=WP_311540967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452130.1;locus_tag=RM615_RS05490;product=NERD domain-containing protein;protein_id=WP_311540967.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 252249 253448 . - . ID=gene-RM615_RS05495;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=RM615_RS05495;old_locus_tag=RM615_05495 NZ_JAVRJW010000002.1 Protein Homology CDS 252249 253448 . - 0 ID=cds-WP_037574511.1;Parent=gene-RM615_RS05495;Dbxref=GenBank:WP_037574511.1;Name=WP_037574511.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=RM615_RS05495;product=methionine adenosyltransferase;protein_id=WP_037574511.1;transl_table=11 NZ_JAVRJW010000002.1 cmsearch riboswitch 253557 253667 . - . ID=id-NZ_JAVRJW010000002.1:253557..253667;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000002.1 RefSeq gene 253881 255461 . + . ID=gene-RM615_RS05500;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=RM615_RS05500;old_locus_tag=RM615_05500 NZ_JAVRJW010000002.1 Protein Homology CDS 253881 255461 . + 0 ID=cds-WP_037574513.1;Parent=gene-RM615_RS05500;Dbxref=GenBank:WP_037574513.1;Name=WP_037574513.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=RM615_RS05500;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_037574513.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 255497 256282 . - . ID=gene-RM615_RS05505;Name=RM615_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05505;old_locus_tag=RM615_05505 NZ_JAVRJW010000002.1 Protein Homology CDS 255497 256282 . - 0 ID=cds-WP_172458435.1;Parent=gene-RM615_RS05505;Dbxref=GenBank:WP_172458435.1;Name=WP_172458435.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452127.1;locus_tag=RM615_RS05505;product=alpha/beta hydrolase family protein;protein_id=WP_172458435.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 256269 256733 . - . ID=gene-RM615_RS05510;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=RM615_RS05510;old_locus_tag=RM615_05510 NZ_JAVRJW010000002.1 Protein Homology CDS 256269 256733 . - 0 ID=cds-WP_037574517.1;Parent=gene-RM615_RS05510;Dbxref=GenBank:WP_037574517.1;Name=WP_037574517.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613581.1;locus_tag=RM615_RS05510;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_037574517.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 256796 257026 . + . ID=gene-RM615_RS05515;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=RM615_RS05515;old_locus_tag=RM615_05515 NZ_JAVRJW010000002.1 Protein Homology CDS 256796 257026 . + 0 ID=cds-WP_037574520.1;Parent=gene-RM615_RS05515;Dbxref=GenBank:WP_037574520.1;Name=WP_037574520.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=RM615_RS05515;product=membrane protein insertion efficiency factor YidD;protein_id=WP_037574520.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 257023 258012 . - . ID=gene-RM615_RS05520;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=RM615_RS05520;old_locus_tag=RM615_05520 NZ_JAVRJW010000002.1 Protein Homology CDS 257023 258012 . - 0 ID=cds-WP_105962883.1;Parent=gene-RM615_RS05520;Dbxref=GenBank:WP_105962883.1;Name=WP_105962883.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=RM615_RS05520;product=o-succinylbenzoate synthase;protein_id=WP_105962883.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 258009 259418 . - . ID=gene-RM615_RS05525;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=RM615_RS05525;old_locus_tag=RM615_05525 NZ_JAVRJW010000002.1 Protein Homology CDS 258009 259418 . - 0 ID=cds-WP_105962884.1;Parent=gene-RM615_RS05525;Dbxref=GenBank:WP_105962884.1;Name=WP_105962884.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464482.1;locus_tag=RM615_RS05525;product=o-succinylbenzoate--CoA ligase;protein_id=WP_105962884.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 259674 260168 . - . ID=gene-RM615_RS05530;Name=RM615_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05530;old_locus_tag=RM615_05530 NZ_JAVRJW010000002.1 Protein Homology CDS 259674 260168 . - 0 ID=cds-WP_037574529.1;Parent=gene-RM615_RS05530;Dbxref=GenBank:WP_037574529.1;Name=WP_037574529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=RM615_RS05530;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037574529.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 260216 260458 . - . ID=gene-RM615_RS05535;Name=RM615_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05535;old_locus_tag=RM615_05535 NZ_JAVRJW010000002.1 Protein Homology CDS 260216 260458 . - 0 ID=cds-WP_037574531.1;Parent=gene-RM615_RS05535;Dbxref=GenBank:WP_037574531.1;Name=WP_037574531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432747.1;locus_tag=RM615_RS05535;product=DUF2273 domain-containing protein;protein_id=WP_037574531.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 260479 261024 . - . ID=gene-RM615_RS05540;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=RM615_RS05540;old_locus_tag=RM615_05540 NZ_JAVRJW010000002.1 Protein Homology CDS 260479 261024 . - 0 ID=cds-WP_037574533.1;Parent=gene-RM615_RS05540;Dbxref=GenBank:WP_037574533.1;Name=WP_037574533.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=RM615_RS05540;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_037574533.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 261345 262091 . + . ID=gene-RM615_RS05545;Name=RM615_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05545;old_locus_tag=RM615_05545 NZ_JAVRJW010000002.1 Protein Homology CDS 261345 262091 . + 0 ID=cds-WP_105965360.1;Parent=gene-RM615_RS05545;Dbxref=GenBank:WP_105965360.1;Name=WP_105965360.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006677782.1;locus_tag=RM615_RS05545;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_105965360.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 262604 263323 . - . ID=gene-RM615_RS05550;Name=RM615_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05550;old_locus_tag=RM615_05550 NZ_JAVRJW010000002.1 Protein Homology CDS 262604 263323 . - 0 ID=cds-WP_198644536.1;Parent=gene-RM615_RS05550;Dbxref=GenBank:WP_198644536.1;Name=WP_198644536.1;Ontology_term=GO:0008233,GO:0070007;gbkey=CDS;go_function=peptidase activity|0008233||IEA,glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF024760.7;locus_tag=RM615_RS05550;product=PrsW family glutamic-type intramembrane protease;protein_id=WP_198644536.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq pseudogene 265627 266153 . + . ID=gene-RM615_RS11240;Name=RM615_RS11240;end_range=266153,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11240;partial=true;pseudo=true NZ_JAVRJW010000002.1 Protein Homology CDS 265627 266153 . + 0 ID=cds-RM615_RS11240;Parent=gene-RM615_RS11240;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=266153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613079.1;locus_tag=RM615_RS11240;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 266377 266742 . - . ID=gene-RM615_RS05555;Name=RM615_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05555;old_locus_tag=RM615_05555 NZ_JAVRJW010000002.1 Protein Homology CDS 266377 266742 . - 0 ID=cds-WP_105965358.1;Parent=gene-RM615_RS05555;Dbxref=GenBank:WP_105965358.1;Name=WP_105965358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501230.1;locus_tag=RM615_RS05555;product=hypothetical protein;protein_id=WP_105965358.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 266841 267194 . - . ID=gene-RM615_RS05560;Name=RM615_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05560;old_locus_tag=RM615_05560 NZ_JAVRJW010000002.1 Protein Homology CDS 266841 267194 . - 0 ID=cds-WP_233649985.1;Parent=gene-RM615_RS05560;Dbxref=GenBank:WP_233649985.1;Name=WP_233649985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF056917.1;locus_tag=RM615_RS05560;product=YqxI family protein;protein_id=WP_233649985.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 267503 267664 . - . ID=gene-RM615_RS05565;Name=RM615_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05565;old_locus_tag=RM615_05565 NZ_JAVRJW010000002.1 Protein Homology CDS 267503 267664 . - 0 ID=cds-WP_169301470.1;Parent=gene-RM615_RS05565;Dbxref=GenBank:WP_169301470.1;Name=WP_169301470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167674.1;locus_tag=RM615_RS05565;product=hypothetical protein;protein_id=WP_169301470.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 267791 268006 . - . ID=gene-RM615_RS05570;Name=RM615_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05570;old_locus_tag=RM615_05570 NZ_JAVRJW010000002.1 Protein Homology CDS 267791 268006 . - 0 ID=cds-WP_107360819.1;Parent=gene-RM615_RS05570;Dbxref=GenBank:WP_107360819.1;Name=WP_107360819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=RM615_RS05570;product=hypothetical protein;protein_id=WP_107360819.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 268340 268428 . - . ID=gene-RM615_RS05575;Name=RM615_RS05575;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05575;old_locus_tag=RM615_05575 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268340 268428 . - . ID=rna-RM615_RS05575;Parent=gene-RM615_RS05575;anticodon=(pos:complement(268391..268393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05575;product=tRNA-Ser NZ_JAVRJW010000002.1 tRNAscan-SE exon 268340 268428 . - . ID=exon-RM615_RS05575-1;Parent=rna-RM615_RS05575;anticodon=(pos:complement(268391..268393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05575;product=tRNA-Ser NZ_JAVRJW010000002.1 RefSeq gene 268477 268548 . - . ID=gene-RM615_RS05580;Name=RM615_RS05580;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05580;old_locus_tag=RM615_05580 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268477 268548 . - . ID=rna-RM615_RS05580;Parent=gene-RM615_RS05580;anticodon=(pos:complement(268513..268515));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05580;product=tRNA-Glu NZ_JAVRJW010000002.1 tRNAscan-SE exon 268477 268548 . - . ID=exon-RM615_RS05580-1;Parent=rna-RM615_RS05580;anticodon=(pos:complement(268513..268515));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05580;product=tRNA-Glu NZ_JAVRJW010000002.1 RefSeq gene 268550 268624 . - . ID=gene-RM615_RS05585;Name=RM615_RS05585;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05585;old_locus_tag=RM615_05585 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268550 268624 . - . ID=rna-RM615_RS05585;Parent=gene-RM615_RS05585;anticodon=(pos:complement(268590..268592));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05585;product=tRNA-Asn NZ_JAVRJW010000002.1 tRNAscan-SE exon 268550 268624 . - . ID=exon-RM615_RS05585-1;Parent=rna-RM615_RS05585;anticodon=(pos:complement(268590..268592));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05585;product=tRNA-Asn NZ_JAVRJW010000002.1 RefSeq gene 268634 268707 . - . ID=gene-RM615_RS05590;Name=RM615_RS05590;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05590;old_locus_tag=RM615_05590 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268634 268707 . - . ID=rna-RM615_RS05590;Parent=gene-RM615_RS05590;anticodon=(pos:complement(268673..268675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05590;product=tRNA-Gly NZ_JAVRJW010000002.1 tRNAscan-SE exon 268634 268707 . - . ID=exon-RM615_RS05590-1;Parent=rna-RM615_RS05590;anticodon=(pos:complement(268673..268675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05590;product=tRNA-Gly NZ_JAVRJW010000002.1 RefSeq gene 268721 268793 . - . ID=gene-RM615_RS05595;Name=RM615_RS05595;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05595;old_locus_tag=RM615_05595 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268721 268793 . - . ID=rna-RM615_RS05595;Parent=gene-RM615_RS05595;anticodon=(pos:complement(268758..268760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05595;product=tRNA-His NZ_JAVRJW010000002.1 tRNAscan-SE exon 268721 268793 . - . ID=exon-RM615_RS05595-1;Parent=rna-RM615_RS05595;anticodon=(pos:complement(268758..268760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05595;product=tRNA-His NZ_JAVRJW010000002.1 RefSeq gene 268806 268878 . - . ID=gene-RM615_RS05600;Name=RM615_RS05600;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05600;old_locus_tag=RM615_05600 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268806 268878 . - . ID=rna-RM615_RS05600;Parent=gene-RM615_RS05600;anticodon=(pos:complement(268843..268845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05600;product=tRNA-Phe NZ_JAVRJW010000002.1 tRNAscan-SE exon 268806 268878 . - . ID=exon-RM615_RS05600-1;Parent=rna-RM615_RS05600;anticodon=(pos:complement(268843..268845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05600;product=tRNA-Phe NZ_JAVRJW010000002.1 RefSeq gene 268889 268965 . - . ID=gene-RM615_RS05605;Name=RM615_RS05605;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05605;old_locus_tag=RM615_05605 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268889 268965 . - . ID=rna-RM615_RS05605;Parent=gene-RM615_RS05605;anticodon=(pos:complement(268929..268931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05605;product=tRNA-Asp NZ_JAVRJW010000002.1 tRNAscan-SE exon 268889 268965 . - . ID=exon-RM615_RS05605-1;Parent=rna-RM615_RS05605;anticodon=(pos:complement(268929..268931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05605;product=tRNA-Asp NZ_JAVRJW010000002.1 RefSeq gene 268977 269050 . - . ID=gene-RM615_RS05610;Name=RM615_RS05610;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05610;old_locus_tag=RM615_05610 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 268977 269050 . - . ID=rna-RM615_RS05610;Parent=gene-RM615_RS05610;anticodon=(pos:complement(269014..269016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05610;product=tRNA-Met NZ_JAVRJW010000002.1 tRNAscan-SE exon 268977 269050 . - . ID=exon-RM615_RS05610-1;Parent=rna-RM615_RS05610;anticodon=(pos:complement(269014..269016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05610;product=tRNA-Met NZ_JAVRJW010000002.1 RefSeq gene 269148 269222 . - . ID=gene-RM615_RS05615;Name=RM615_RS05615;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS05615;old_locus_tag=RM615_05615 NZ_JAVRJW010000002.1 tRNAscan-SE tRNA 269148 269222 . - . ID=rna-RM615_RS05615;Parent=gene-RM615_RS05615;anticodon=(pos:complement(269187..269189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05615;product=tRNA-Glu NZ_JAVRJW010000002.1 tRNAscan-SE exon 269148 269222 . - . ID=exon-RM615_RS05615-1;Parent=rna-RM615_RS05615;anticodon=(pos:complement(269187..269189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS05615;product=tRNA-Glu NZ_JAVRJW010000002.1 RefSeq gene 269390 269944 . - . ID=gene-RM615_RS05620;Name=RM615_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05620;old_locus_tag=RM615_05620 NZ_JAVRJW010000002.1 Protein Homology CDS 269390 269944 . - 0 ID=cds-WP_037574544.1;Parent=gene-RM615_RS05620;Dbxref=GenBank:WP_037574544.1;Name=WP_037574544.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=RM615_RS05620;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_037574544.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 270269 271666 . - . ID=gene-RM615_RS05625;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=RM615_RS05625;old_locus_tag=RM615_05625 NZ_JAVRJW010000002.1 Protein Homology CDS 270269 271666 . - 0 ID=cds-WP_037574545.1;Parent=gene-RM615_RS05625;Dbxref=GenBank:WP_037574545.1;Name=WP_037574545.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=protoporphyrinogen oxidase activity%2C oxygen as acceptor|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=RM615_RS05625;product=protoporphyrinogen oxidase;protein_id=WP_037574545.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 271672 272604 . - . ID=gene-RM615_RS05630;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=RM615_RS05630;old_locus_tag=RM615_05630 NZ_JAVRJW010000002.1 Protein Homology CDS 271672 272604 . - 0 ID=cds-WP_037574547.1;Parent=gene-RM615_RS05630;Dbxref=GenBank:WP_037574547.1;Name=WP_037574547.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=RM615_RS05630;product=ferrochelatase;protein_id=WP_037574547.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 272626 273669 . - . ID=gene-RM615_RS05635;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=RM615_RS05635;old_locus_tag=RM615_05635 NZ_JAVRJW010000002.1 Protein Homology CDS 272626 273669 . - 0 ID=cds-WP_311540968.1;Parent=gene-RM615_RS05635;Dbxref=GenBank:WP_311540968.1;Name=WP_311540968.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164994.1;locus_tag=RM615_RS05635;product=uroporphyrinogen decarboxylase;protein_id=WP_311540968.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 273866 274384 . + . ID=gene-RM615_RS05640;Name=RM615_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05640;old_locus_tag=RM615_05640 NZ_JAVRJW010000002.1 Protein Homology CDS 273866 274384 . + 0 ID=cds-WP_311540969.1;Parent=gene-RM615_RS05640;Dbxref=GenBank:WP_311540969.1;Name=WP_311540969.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425440.1;locus_tag=RM615_RS05640;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_311540969.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 274659 275873 . - . ID=gene-RM615_RS05645;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=RM615_RS05645;old_locus_tag=RM615_05645 NZ_JAVRJW010000002.1 Protein Homology CDS 274659 275873 . - 0 ID=cds-WP_311540970.1;Parent=gene-RM615_RS05645;Dbxref=GenBank:WP_311540970.1;Name=WP_311540970.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=RM615_RS05645;product=ABC transporter permease EcsB;protein_id=WP_311540970.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 275870 276607 . - . ID=gene-RM615_RS05650;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=RM615_RS05650;old_locus_tag=RM615_05650 NZ_JAVRJW010000002.1 Protein Homology CDS 275870 276607 . - 0 ID=cds-WP_037574557.1;Parent=gene-RM615_RS05650;Dbxref=GenBank:WP_037574557.1;Name=WP_037574557.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507255.1;locus_tag=RM615_RS05650;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_037574557.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 276736 277161 . + . ID=gene-RM615_RS05655;Name=RM615_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05655;old_locus_tag=RM615_05655 NZ_JAVRJW010000002.1 Protein Homology CDS 276736 277161 . + 0 ID=cds-WP_311540971.1;Parent=gene-RM615_RS05655;Dbxref=GenBank:WP_311540971.1;Name=WP_311540971.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=RM615_RS05655;product=HIT family protein;protein_id=WP_311540971.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 277246 277602 . + . ID=gene-RM615_RS05660;Name=RM615_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05660;old_locus_tag=RM615_05660 NZ_JAVRJW010000002.1 Protein Homology CDS 277246 277602 . + 0 ID=cds-WP_037574561.1;Parent=gene-RM615_RS05660;Dbxref=GenBank:WP_037574561.1;Name=WP_037574561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=RM615_RS05660;product=YtxH domain-containing protein;protein_id=WP_037574561.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 277702 278232 . + . ID=gene-RM615_RS05665;Name=RM615_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05665;old_locus_tag=RM615_05665 NZ_JAVRJW010000002.1 Protein Homology CDS 277702 278232 . + 0 ID=cds-WP_107366551.1;Parent=gene-RM615_RS05665;Dbxref=GenBank:WP_107366551.1;Name=WP_107366551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=RM615_RS05665;product=HTH-type transcriptional regulator Hpr;protein_id=WP_107366551.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 278285 278824 . + . ID=gene-RM615_RS05670;Name=RM615_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05670;old_locus_tag=RM615_05670 NZ_JAVRJW010000002.1 Protein Homology CDS 278285 278824 . + 0 ID=cds-WP_103159571.1;Parent=gene-RM615_RS05670;Dbxref=GenBank:WP_103159571.1;Name=WP_103159571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466819.1;locus_tag=RM615_RS05670;product=DUF3267 domain-containing protein;protein_id=WP_103159571.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 279034 280008 . + . ID=gene-RM615_RS05675;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=RM615_RS05675;old_locus_tag=RM615_05675 NZ_JAVRJW010000002.1 Protein Homology CDS 279034 280008 . + 0 ID=cds-WP_037574569.1;Parent=gene-RM615_RS05675;Dbxref=GenBank:WP_037574569.1;Name=WP_037574569.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425447.1;locus_tag=RM615_RS05675;product=peptidylprolyl isomerase PrsA;protein_id=WP_037574569.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 280323 281264 . - . ID=gene-RM615_RS05680;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=RM615_RS05680;old_locus_tag=RM615_05680 NZ_JAVRJW010000002.1 Protein Homology CDS 280323 281264 . - 0 ID=cds-WP_037574571.1;Parent=gene-RM615_RS05680;Dbxref=GenBank:WP_037574571.1;Name=WP_037574571.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=RM615_RS05680;product=3'-5' exoribonuclease YhaM;protein_id=WP_037574571.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 281283 284210 . - . ID=gene-RM615_RS05685;Name=RM615_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05685;old_locus_tag=RM615_05685 NZ_JAVRJW010000002.1 Protein Homology CDS 281283 284210 . - 0 ID=cds-WP_311540972.1;Parent=gene-RM615_RS05685;Dbxref=GenBank:WP_311540972.1;Name=WP_311540972.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=RM615_RS05685;product=AAA family ATPase;protein_id=WP_311540972.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 284214 285401 . - . ID=gene-RM615_RS05690;Name=RM615_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05690;old_locus_tag=RM615_05690 NZ_JAVRJW010000002.1 Protein Homology CDS 284214 285401 . - 0 ID=cds-WP_037574576.1;Parent=gene-RM615_RS05690;Dbxref=GenBank:WP_037574576.1;Name=WP_037574576.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=RM615_RS05690;product=metallophosphoesterase family protein;protein_id=WP_037574576.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 285623 285967 . - . ID=gene-RM615_RS05695;Name=RM615_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05695;old_locus_tag=RM615_05695 NZ_JAVRJW010000002.1 Protein Homology CDS 285623 285967 . - 0 ID=cds-WP_037574578.1;Parent=gene-RM615_RS05695;Dbxref=GenBank:WP_037574578.1;Name=WP_037574578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=RM615_RS05695;product=YlbF/YmcA family competence regulator;protein_id=WP_037574578.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq pseudogene 286054 287184 . - . ID=gene-RM615_RS05700;Name=RM615_RS05700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS05700;old_locus_tag=RM615_05700;pseudo=true NZ_JAVRJW010000002.1 Protein Homology CDS 286054 287184 . - 0 ID=cds-RM615_RS05700;Parent=gene-RM615_RS05700;Note=internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016196.7;locus_tag=RM615_RS05700;product=DUF445 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 287341 287805 . - . ID=gene-RM615_RS05705;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=RM615_RS05705;old_locus_tag=RM615_05705 NZ_JAVRJW010000002.1 Protein Homology CDS 287341 287805 . - 0 ID=cds-WP_037574584.1;Parent=gene-RM615_RS05705;Dbxref=GenBank:WP_037574584.1;Name=WP_037574584.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=RM615_RS05705;product=XRE family transcriptional regulator XdrA;protein_id=WP_037574584.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 288195 288440 . + . ID=gene-RM615_RS05710;Name=RM615_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05710;old_locus_tag=RM615_05710 NZ_JAVRJW010000002.1 GeneMarkS-2+ CDS 288195 288440 . + 0 ID=cds-WP_037574587.1;Parent=gene-RM615_RS05710;Dbxref=GenBank:WP_037574587.1;Name=WP_037574587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS05710;product=hypothetical protein;protein_id=WP_037574587.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 288565 288777 . - . ID=gene-RM615_RS05715;Name=RM615_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05715;old_locus_tag=RM615_05715 NZ_JAVRJW010000002.1 Protein Homology CDS 288565 288777 . - 0 ID=cds-WP_037574590.1;Parent=gene-RM615_RS05715;Dbxref=GenBank:WP_037574590.1;Name=WP_037574590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=RM615_RS05715;product=DUF6007 family protein;protein_id=WP_037574590.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 289462 289734 . - . ID=gene-RM615_RS05720;Name=RM615_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05720;old_locus_tag=RM615_05720 NZ_JAVRJW010000002.1 Protein Homology CDS 289462 289734 . - 0 ID=cds-WP_157947846.1;Parent=gene-RM615_RS05720;Dbxref=GenBank:WP_157947846.1;Name=WP_157947846.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM615_RS05720;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_157947846.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 289727 290032 . - . ID=gene-RM615_RS05725;Name=RM615_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05725;old_locus_tag=RM615_05725 NZ_JAVRJW010000002.1 Protein Homology CDS 289727 290032 . - 0 ID=cds-WP_105963607.1;Parent=gene-RM615_RS05725;Dbxref=GenBank:WP_105963607.1;Name=WP_105963607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014980.7;locus_tag=RM615_RS05725;product=fibronectin binding protein;protein_id=WP_105963607.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 290323 290718 . + . ID=gene-RM615_RS05730;Name=RM615_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05730;old_locus_tag=RM615_05730 NZ_JAVRJW010000002.1 Protein Homology CDS 290323 290718 . + 0 ID=cds-WP_233654852.1;Parent=gene-RM615_RS05730;Dbxref=GenBank:WP_233654852.1;Name=WP_233654852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614928.1;locus_tag=RM615_RS05730;product=hypothetical protein;protein_id=WP_233654852.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 290807 292093 . - . ID=gene-RM615_RS05735;Name=RM615_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05735;old_locus_tag=RM615_05735 NZ_JAVRJW010000002.1 Protein Homology CDS 290807 292093 . - 0 ID=cds-WP_233654851.1;Parent=gene-RM615_RS05735;Dbxref=GenBank:WP_233654851.1;Name=WP_233654851.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=RM615_RS05735;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_233654851.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 292306 294705 . - . ID=gene-RM615_RS05740;Name=RM615_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05740;old_locus_tag=RM615_05740 NZ_JAVRJW010000002.1 Protein Homology CDS 292306 294705 . - 0 ID=cds-WP_311540974.1;Parent=gene-RM615_RS05740;Dbxref=GenBank:WP_311540974.1;Name=WP_311540974.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037690.7;locus_tag=RM615_RS05740;product=Ig-like domain-containing protein;protein_id=WP_311540974.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 294985 295860 . + . ID=gene-RM615_RS05745;Name=RM615_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05745;old_locus_tag=RM615_05745 NZ_JAVRJW010000002.1 Protein Homology CDS 294985 295860 . + 0 ID=cds-WP_105986526.1;Parent=gene-RM615_RS05745;Dbxref=GenBank:WP_105986526.1;Name=WP_105986526.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425458.1;locus_tag=RM615_RS05745;product=cation diffusion facilitator family transporter;protein_id=WP_105986526.1;transl_table=11 NZ_JAVRJW010000002.1 RefSeq gene 295950 297155 . - . ID=gene-RM615_RS05750;Name=RM615_RS05750;end_range=297155,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05750;old_locus_tag=RM615_05750;partial=true NZ_JAVRJW010000002.1 Protein Homology CDS 295950 297155 . - 0 ID=cds-WP_311540976.1;Parent=gene-RM615_RS05750;Dbxref=GenBank:WP_311540976.1;Name=WP_311540976.1;Ontology_term=GO:0005576;end_range=297155,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM615_RS05750;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_311540976.1;transl_table=11 ##sequence-region NZ_JAVRJW010000003.1 1 248524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000003.1 RefSeq region 1 248524 . + . ID=NZ_JAVRJW010000003.1:1..248524;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000003.1 RefSeq gene 1 945 . + . ID=gene-RM615_RS05755;Name=RM615_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05755;old_locus_tag=RM615_05755;partial=true;start_range=.,1 NZ_JAVRJW010000003.1 Protein Homology CDS 1 945 . + 0 ID=cds-WP_311540979.1;Parent=gene-RM615_RS05755;Dbxref=GenBank:WP_311540979.1;Name=WP_311540979.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM615_RS05755;partial=true;product=Ig-like domain-containing protein;protein_id=WP_311540979.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 1173 2813 . + . ID=gene-RM615_RS05760;Name=RM615_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05760;old_locus_tag=RM615_05760 NZ_JAVRJW010000003.1 Protein Homology CDS 1173 2813 . + 0 ID=cds-WP_311540980.1;Parent=gene-RM615_RS05760;Dbxref=GenBank:WP_311540980.1;Name=WP_311540980.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813558.1;locus_tag=RM615_RS05760;product=alpha-keto acid decarboxylase family protein;protein_id=WP_311540980.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 3294 4697 . + . ID=gene-RM615_RS05765;Name=RM615_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05765;old_locus_tag=RM615_05765 NZ_JAVRJW010000003.1 Protein Homology CDS 3294 4697 . + 0 ID=cds-WP_311540981.1;Parent=gene-RM615_RS05765;Dbxref=GenBank:WP_311540981.1;Name=WP_311540981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=RM615_RS05765;product=anthranilate synthase component I;protein_id=WP_311540981.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 4694 5275 . + . ID=gene-RM615_RS05770;Name=RM615_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05770;old_locus_tag=RM615_05770 NZ_JAVRJW010000003.1 Protein Homology CDS 4694 5275 . + 0 ID=cds-WP_103158685.1;Parent=gene-RM615_RS05770;Dbxref=GenBank:WP_103158685.1;Name=WP_103158685.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=RM615_RS05770;product=anthranilate synthase component II;protein_id=WP_103158685.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 5262 6278 . + . ID=gene-RM615_RS05775;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=RM615_RS05775;old_locus_tag=RM615_05775 NZ_JAVRJW010000003.1 Protein Homology CDS 5262 6278 . + 0 ID=cds-WP_037575232.1;Parent=gene-RM615_RS05775;Dbxref=GenBank:WP_037575232.1;Name=WP_037575232.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275831.1;locus_tag=RM615_RS05775;product=anthranilate phosphoribosyltransferase;protein_id=WP_037575232.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 6262 7038 . + . ID=gene-RM615_RS05780;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=RM615_RS05780;old_locus_tag=RM615_05780 NZ_JAVRJW010000003.1 Protein Homology CDS 6262 7038 . + 0 ID=cds-WP_105963236.1;Parent=gene-RM615_RS05780;Dbxref=GenBank:WP_105963236.1;Name=WP_105963236.1;Ontology_term=GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433850.1;locus_tag=RM615_RS05780;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_105963236.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 7044 7673 . + . ID=gene-RM615_RS05785;Name=RM615_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05785;old_locus_tag=RM615_05785 NZ_JAVRJW010000003.1 Protein Homology CDS 7044 7673 . + 0 ID=cds-WP_105965468.1;Parent=gene-RM615_RS05785;Dbxref=GenBank:WP_105965468.1;Name=WP_105965468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=RM615_RS05785;product=phosphoribosylanthranilate isomerase;protein_id=WP_105965468.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 7670 8884 . + . ID=gene-RM615_RS05790;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=RM615_RS05790;old_locus_tag=RM615_05790 NZ_JAVRJW010000003.1 Protein Homology CDS 7670 8884 . + 0 ID=cds-WP_037575225.1;Parent=gene-RM615_RS05790;Dbxref=GenBank:WP_037575225.1;Name=WP_037575225.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507663.1;locus_tag=RM615_RS05790;product=tryptophan synthase subunit beta;protein_id=WP_037575225.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 8877 9614 . + . ID=gene-RM615_RS05795;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=RM615_RS05795;old_locus_tag=RM615_05795 NZ_JAVRJW010000003.1 Protein Homology CDS 8877 9614 . + 0 ID=cds-WP_107378534.1;Parent=gene-RM615_RS05795;Dbxref=GenBank:WP_107378534.1;Name=WP_107378534.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383990.1;locus_tag=RM615_RS05795;product=tryptophan synthase subunit alpha;protein_id=WP_107378534.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 9776 10483 . + . ID=gene-RM615_RS05800;Name=RM615_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05800;old_locus_tag=RM615_05800 NZ_JAVRJW010000003.1 Protein Homology CDS 9776 10483 . + 0 ID=cds-WP_105963232.1;Parent=gene-RM615_RS05800;Dbxref=GenBank:WP_105963232.1;Name=WP_105963232.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=RM615_RS05800;product=HAD family hydrolase;protein_id=WP_105963232.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 10958 11386 . - . ID=gene-RM615_RS05805;Name=RM615_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05805;old_locus_tag=RM615_05805 NZ_JAVRJW010000003.1 Protein Homology CDS 10958 11386 . - 0 ID=cds-WP_105965471.1;Parent=gene-RM615_RS05805;Dbxref=GenBank:WP_105965471.1;Name=WP_105965471.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=RM615_RS05805;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_105965471.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 11587 12192 . - . ID=gene-RM615_RS05810;Name=RM615_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05810;old_locus_tag=RM615_05810 NZ_JAVRJW010000003.1 Protein Homology CDS 11587 12192 . - 0 ID=cds-WP_107363916.1;Parent=gene-RM615_RS05810;Dbxref=GenBank:WP_107363916.1;Name=WP_107363916.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM615_RS05810;product=GNAT family N-acetyltransferase;protein_id=WP_107363916.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 12344 14122 . + . ID=gene-RM615_RS05815;Name=RM615_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05815;old_locus_tag=RM615_05815 NZ_JAVRJW010000003.1 Protein Homology CDS 12344 14122 . + 0 ID=cds-WP_311540982.1;Parent=gene-RM615_RS05815;Dbxref=GenBank:WP_311540982.1;Name=WP_311540982.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020008593.1;locus_tag=RM615_RS05815;product=ABC transporter ATP-binding protein;protein_id=WP_311540982.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 14119 15903 . + . ID=gene-RM615_RS05820;Name=RM615_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05820;old_locus_tag=RM615_05820 NZ_JAVRJW010000003.1 Protein Homology CDS 14119 15903 . + 0 ID=cds-WP_311540983.1;Parent=gene-RM615_RS05820;Dbxref=GenBank:WP_311540983.1;Name=WP_311540983.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548609.1;locus_tag=RM615_RS05820;product=ABC transporter ATP-binding protein;protein_id=WP_311540983.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 16000 16743 . - . ID=gene-RM615_RS05825;Name=RM615_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05825;old_locus_tag=RM615_05825 NZ_JAVRJW010000003.1 Protein Homology CDS 16000 16743 . - 0 ID=cds-WP_105963228.1;Parent=gene-RM615_RS05825;Dbxref=GenBank:WP_105963228.1;Name=WP_105963228.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF019359.7;locus_tag=RM615_RS05825;product=MerR family transcriptional regulator;protein_id=WP_105963228.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 16868 17239 . - . ID=gene-RM615_RS05830;Name=RM615_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05830;old_locus_tag=RM615_05830 NZ_JAVRJW010000003.1 Protein Homology CDS 16868 17239 . - 0 ID=cds-WP_037575204.1;Parent=gene-RM615_RS05830;Dbxref=GenBank:WP_037575204.1;Name=WP_037575204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166343.1;locus_tag=RM615_RS05830;product=VOC family protein;protein_id=WP_037575204.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 17288 17716 . - . ID=gene-RM615_RS05835;Name=RM615_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05835;old_locus_tag=RM615_05835 NZ_JAVRJW010000003.1 Protein Homology CDS 17288 17716 . - 0 ID=cds-WP_037575201.1;Parent=gene-RM615_RS05835;Dbxref=GenBank:WP_037575201.1;Name=WP_037575201.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=RM615_RS05835;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_037575201.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 18158 19549 . - . ID=gene-RM615_RS05840;Name=RM615_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05840;old_locus_tag=RM615_05840 NZ_JAVRJW010000003.1 Protein Homology CDS 18158 19549 . - 0 ID=cds-WP_103158677.1;Parent=gene-RM615_RS05840;Dbxref=GenBank:WP_103158677.1;Name=WP_103158677.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548016.1;locus_tag=RM615_RS05840;product=alanine/glycine:cation symporter family protein;protein_id=WP_103158677.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 19957 21915 . - . ID=gene-RM615_RS05845;Name=RM615_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05845;old_locus_tag=RM615_05845 NZ_JAVRJW010000003.1 Protein Homology CDS 19957 21915 . - 0 ID=cds-WP_105963226.1;Parent=gene-RM615_RS05845;Dbxref=GenBank:WP_105963226.1;Name=WP_105963226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426154.1;locus_tag=RM615_RS05845;product=fructose-1%2C6-bisphosphatase;protein_id=WP_105963226.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 22181 23374 . + . ID=gene-RM615_RS05850;Name=RM615_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05850;old_locus_tag=RM615_05850 NZ_JAVRJW010000003.1 Protein Homology CDS 22181 23374 . + 0 ID=cds-WP_311540984.1;Parent=gene-RM615_RS05850;Dbxref=GenBank:WP_311540984.1;Name=WP_311540984.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426155.1;locus_tag=RM615_RS05850;product=MFS transporter;protein_id=WP_311540984.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 23595 24881 . + . ID=gene-RM615_RS05855;Name=RM615_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05855;old_locus_tag=RM615_05855 NZ_JAVRJW010000003.1 Protein Homology CDS 23595 24881 . + 0 ID=cds-WP_107366337.1;Parent=gene-RM615_RS05855;Dbxref=GenBank:WP_107366337.1;Name=WP_107366337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432812.1;locus_tag=RM615_RS05855;product=pyruvate MFS transporter;protein_id=WP_107366337.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 25351 25950 . + . ID=gene-RM615_RS05860;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=RM615_RS05860;old_locus_tag=RM615_05860 NZ_JAVRJW010000003.1 Protein Homology CDS 25351 25950 . + 0 ID=cds-WP_037575184.1;Parent=gene-RM615_RS05860;Dbxref=GenBank:WP_037575184.1;Name=WP_037575184.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382165.1;locus_tag=RM615_RS05860;product=class A sortase SrtA;protein_id=WP_037575184.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 26029 27168 . + . ID=gene-RM615_RS05865;Name=RM615_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05865;old_locus_tag=RM615_05865 NZ_JAVRJW010000003.1 Protein Homology CDS 26029 27168 . + 0 ID=cds-WP_107370322.1;Parent=gene-RM615_RS05865;Dbxref=GenBank:WP_107370322.1;Name=WP_107370322.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501186.1;locus_tag=RM615_RS05865;product=glycerate kinase family protein;protein_id=WP_107370322.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 27236 27925 . - . ID=gene-RM615_RS05870;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=RM615_RS05870;old_locus_tag=RM615_05870 NZ_JAVRJW010000003.1 Protein Homology CDS 27236 27925 . - 0 ID=cds-WP_037575178.1;Parent=gene-RM615_RS05870;Dbxref=GenBank:WP_037575178.1;Name=WP_037575178.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899613.1;locus_tag=RM615_RS05870;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_037575178.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 28260 29351 . + . ID=gene-RM615_RS05875;Name=RM615_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05875;old_locus_tag=RM615_05875 NZ_JAVRJW010000003.1 Protein Homology CDS 28260 29351 . + 0 ID=cds-WP_103158673.1;Parent=gene-RM615_RS05875;Dbxref=GenBank:WP_103158673.1;Name=WP_103158673.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382232.1;locus_tag=RM615_RS05875;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_103158673.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 29572 30645 . + . ID=gene-RM615_RS05880;Name=RM615_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05880;old_locus_tag=RM615_05880 NZ_JAVRJW010000003.1 Protein Homology CDS 29572 30645 . + 0 ID=cds-WP_311540985.1;Parent=gene-RM615_RS05880;Dbxref=GenBank:WP_311540985.1;Name=WP_311540985.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169533.1;locus_tag=RM615_RS05880;product=PTS sugar transporter subunit IIC;protein_id=WP_311540985.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 31021 31785 . - . ID=gene-RM615_RS05885;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=RM615_RS05885;old_locus_tag=RM615_05885 NZ_JAVRJW010000003.1 Protein Homology CDS 31021 31785 . - 0 ID=cds-WP_037575170.1;Parent=gene-RM615_RS05885;Dbxref=GenBank:WP_037575170.1;Name=WP_037575170.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169535.1;locus_tag=RM615_RS05885;product=pyruvate formate-lyase-activating protein;protein_id=WP_037575170.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 31825 34074 . - . ID=gene-RM615_RS05890;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=RM615_RS05890;old_locus_tag=RM615_05890 NZ_JAVRJW010000003.1 Protein Homology CDS 31825 34074 . - 0 ID=cds-WP_311540986.1;Parent=gene-RM615_RS05890;Dbxref=GenBank:WP_311540986.1;Name=WP_311540986.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485526.1;locus_tag=RM615_RS05890;product=formate C-acetyltransferase;protein_id=WP_311540986.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 34410 35075 . + . ID=gene-RM615_RS05895;Name=RM615_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05895;old_locus_tag=RM615_05895 NZ_JAVRJW010000003.1 Protein Homology CDS 34410 35075 . + 0 ID=cds-WP_037575163.1;Parent=gene-RM615_RS05895;Dbxref=GenBank:WP_037575163.1;Name=WP_037575163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465343.1;locus_tag=RM615_RS05895;product=SDR family oxidoreductase;protein_id=WP_037575163.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 35358 36491 . + . ID=gene-RM615_RS05900;Name=RM615_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05900;old_locus_tag=RM615_05900 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 35358 36491 . + 0 ID=cds-WP_103158670.1;Parent=gene-RM615_RS05900;Dbxref=GenBank:WP_103158670.1;Name=WP_103158670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS05900;product=Rho termination factor N-terminal domain-containing protein;protein_id=WP_103158670.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 36555 37961 . - . ID=gene-RM615_RS05905;Name=RM615_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05905;old_locus_tag=RM615_05905 NZ_JAVRJW010000003.1 Protein Homology CDS 36555 37961 . - 0 ID=cds-WP_311540987.1;Parent=gene-RM615_RS05905;Dbxref=GenBank:WP_311540987.1;Name=WP_311540987.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006639679.1;locus_tag=RM615_RS05905;product=PTS transporter subunit IIC;protein_id=WP_311540987.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 37987 38289 . - . ID=gene-RM615_RS05910;Name=RM615_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05910;old_locus_tag=RM615_05910 NZ_JAVRJW010000003.1 Protein Homology CDS 37987 38289 . - 0 ID=cds-WP_037575156.1;Parent=gene-RM615_RS05910;Dbxref=GenBank:WP_037575156.1;Name=WP_037575156.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018662696.1;locus_tag=RM615_RS05910;product=PTS sugar transporter subunit IIB;protein_id=WP_037575156.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 38309 38782 . - . ID=gene-RM615_RS05915;Name=RM615_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05915;old_locus_tag=RM615_05915 NZ_JAVRJW010000003.1 Protein Homology CDS 38309 38782 . - 0 ID=cds-WP_107366863.1;Parent=gene-RM615_RS05915;Dbxref=GenBank:WP_107366863.1;Name=WP_107366863.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM615_RS05915;product=PTS sugar transporter subunit IIA;protein_id=WP_107366863.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 39001 39288 . + . ID=gene-RM615_RS05920;Name=RM615_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05920;old_locus_tag=RM615_05920 NZ_JAVRJW010000003.1 Protein Homology CDS 39001 39288 . + 0 ID=cds-WP_133170497.1;Parent=gene-RM615_RS05920;Dbxref=GenBank:WP_133170497.1;Name=WP_133170497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166516.1;locus_tag=RM615_RS05920;product=hypothetical protein;protein_id=WP_133170497.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 39346 40245 . - . ID=gene-RM615_RS05925;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM615_RS05925;old_locus_tag=RM615_05925 NZ_JAVRJW010000003.1 Protein Homology CDS 39346 40245 . - 0 ID=cds-WP_037575152.1;Parent=gene-RM615_RS05925;Dbxref=GenBank:WP_037575152.1;Name=WP_037575152.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=RM615_RS05925;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_037575152.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 40261 40938 . - . ID=gene-RM615_RS05930;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM615_RS05930;old_locus_tag=RM615_05930 NZ_JAVRJW010000003.1 Protein Homology CDS 40261 40938 . - 0 ID=cds-WP_103158668.1;Parent=gene-RM615_RS05930;Dbxref=GenBank:WP_103158668.1;Name=WP_103158668.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384715.1;locus_tag=RM615_RS05930;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_103158668.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 40953 41984 . - . ID=gene-RM615_RS05935;Name=RM615_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05935;old_locus_tag=RM615_05935 NZ_JAVRJW010000003.1 Protein Homology CDS 40953 41984 . - 0 ID=cds-WP_037575148.1;Parent=gene-RM615_RS05935;Dbxref=GenBank:WP_037575148.1;Name=WP_037575148.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=RM615_RS05935;product=PTS sugar transporter subunit IIC;protein_id=WP_037575148.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 42388 43209 . + . ID=gene-RM615_RS05940;Name=RM615_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05940;old_locus_tag=RM615_05940 NZ_JAVRJW010000003.1 Protein Homology CDS 42388 43209 . + 0 ID=cds-WP_311540988.1;Parent=gene-RM615_RS05940;Dbxref=GenBank:WP_311540988.1;Name=WP_311540988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166521.1;locus_tag=RM615_RS05940;product=putative phosphoesterase;protein_id=WP_311540988.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 43243 44730 . - . ID=gene-RM615_RS05945;Name=RM615_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05945;old_locus_tag=RM615_05945 NZ_JAVRJW010000003.1 Protein Homology CDS 43243 44730 . - 0 ID=cds-WP_037575143.1;Parent=gene-RM615_RS05945;Dbxref=GenBank:WP_037575143.1;Name=WP_037575143.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=RM615_RS05945;product=aldehyde dehydrogenase family protein;protein_id=WP_037575143.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 45562 46572 . + . ID=gene-RM615_RS05950;Name=RM615_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05950;old_locus_tag=RM615_05950 NZ_JAVRJW010000003.1 Protein Homology CDS 45562 46572 . + 0 ID=cds-WP_037575139.1;Parent=gene-RM615_RS05950;Dbxref=GenBank:WP_037575139.1;Name=WP_037575139.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510696.1;locus_tag=RM615_RS05950;product=PTS sugar transporter subunit IIC;protein_id=WP_037575139.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 46601 47359 . + . ID=gene-RM615_RS05955;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=RM615_RS05955;old_locus_tag=RM615_05955 NZ_JAVRJW010000003.1 Protein Homology CDS 46601 47359 . + 0 ID=cds-WP_107366861.1;Parent=gene-RM615_RS05955;Dbxref=GenBank:WP_107366861.1;Name=WP_107366861.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383132.1;locus_tag=RM615_RS05955;product=nicotinamide riboside transporter PnuC;protein_id=WP_107366861.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 47483 49009 . + . ID=gene-RM615_RS05960;Name=RM615_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05960;old_locus_tag=RM615_05960 NZ_JAVRJW010000003.1 Protein Homology CDS 47483 49009 . + 0 ID=cds-WP_037575132.1;Parent=gene-RM615_RS05960;Dbxref=GenBank:WP_037575132.1;Name=WP_037575132.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511671.1;locus_tag=RM615_RS05960;product=SLC13 family permease;protein_id=WP_037575132.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 49191 49370 . + . ID=gene-RM615_RS05965;Name=RM615_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05965;old_locus_tag=RM615_05965 NZ_JAVRJW010000003.1 Protein Homology CDS 49191 49370 . + 0 ID=cds-WP_037575130.1;Parent=gene-RM615_RS05965;Dbxref=GenBank:WP_037575130.1;Name=WP_037575130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384095.1;locus_tag=RM615_RS05965;product=hypothetical protein;protein_id=WP_037575130.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 49641 50459 . + . ID=gene-RM615_RS05970;Name=RM615_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05970;old_locus_tag=RM615_05970 NZ_JAVRJW010000003.1 Protein Homology CDS 49641 50459 . + 0 ID=cds-WP_037575127.1;Parent=gene-RM615_RS05970;Dbxref=GenBank:WP_037575127.1;Name=WP_037575127.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384094.1;locus_tag=RM615_RS05970;product=formate/nitrite transporter family protein;protein_id=WP_037575127.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 50556 51104 . + . ID=gene-RM615_RS05975;Name=RM615_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05975;old_locus_tag=RM615_05975 NZ_JAVRJW010000003.1 Protein Homology CDS 50556 51104 . + 0 ID=cds-WP_037575124.1;Parent=gene-RM615_RS05975;Dbxref=GenBank:WP_037575124.1;Name=WP_037575124.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166527.1;locus_tag=RM615_RS05975;product=GNAT family N-acetyltransferase;protein_id=WP_037575124.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 51227 51973 . + . ID=gene-RM615_RS05980;Name=RM615_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05980;old_locus_tag=RM615_05980 NZ_JAVRJW010000003.1 Protein Homology CDS 51227 51973 . + 0 ID=cds-WP_105996832.1;Parent=gene-RM615_RS05980;Dbxref=GenBank:WP_105996832.1;Name=WP_105996832.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219495.1;locus_tag=RM615_RS05980;product=sirohydrochlorin chelatase;protein_id=WP_105996832.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 51948 52409 . + . ID=gene-RM615_RS05985;Name=RM615_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS05985;old_locus_tag=RM615_05985 NZ_JAVRJW010000003.1 Protein Homology CDS 51948 52409 . + 0 ID=cds-WP_037575117.1;Parent=gene-RM615_RS05985;Dbxref=GenBank:WP_037575117.1;Name=WP_037575117.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=RM615_RS05985;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_037575117.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 52402 54807 . + . ID=gene-RM615_RS05990;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=RM615_RS05990;old_locus_tag=RM615_05990 NZ_JAVRJW010000003.1 Protein Homology CDS 52402 54807 . + 0 ID=cds-WP_311540989.1;Parent=gene-RM615_RS05990;Dbxref=GenBank:WP_311540989.1;Name=WP_311540989.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=RM615_RS05990;product=nitrite reductase large subunit NirB;protein_id=WP_311540989.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 54810 55127 . + . ID=gene-RM615_RS05995;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=RM615_RS05995;old_locus_tag=RM615_05995 NZ_JAVRJW010000003.1 Protein Homology CDS 54810 55127 . + 0 ID=cds-WP_037575111.1;Parent=gene-RM615_RS05995;Dbxref=GenBank:WP_037575111.1;Name=WP_037575111.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=RM615_RS05995;product=nitrite reductase small subunit NirD;protein_id=WP_037575111.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 55118 56044 . + . ID=gene-RM615_RS06000;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM615_RS06000;old_locus_tag=RM615_06000 NZ_JAVRJW010000003.1 Protein Homology CDS 55118 56044 . + 0 ID=cds-WP_311540990.1;Parent=gene-RM615_RS06000;Dbxref=GenBank:WP_311540990.1;Name=WP_311540990.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169215.1;locus_tag=RM615_RS06000;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_311540990.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 56197 58701 . + . ID=gene-RM615_RS06005;Name=RM615_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06005;old_locus_tag=RM615_06005 NZ_JAVRJW010000003.1 Protein Homology CDS 56197 58701 . + 0 ID=cds-WP_311540991.1;Parent=gene-RM615_RS06005;Dbxref=GenBank:WP_311540991.1;Name=WP_311540991.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480379.1;locus_tag=RM615_RS06005;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_311540991.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 59003 62674 . + . ID=gene-RM615_RS06010;Name=RM615_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06010;old_locus_tag=RM615_06010 NZ_JAVRJW010000003.1 Protein Homology CDS 59003 62674 . + 0 ID=cds-WP_311540992.1;Parent=gene-RM615_RS06010;Dbxref=GenBank:WP_311540992.1;Name=WP_311540992.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=RM615_RS06010;product=nitrate reductase subunit alpha;protein_id=WP_311540992.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 62664 64220 . + . ID=gene-RM615_RS06015;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=RM615_RS06015;old_locus_tag=RM615_06015 NZ_JAVRJW010000003.1 Protein Homology CDS 62664 64220 . + 0 ID=cds-WP_037575102.1;Parent=gene-RM615_RS06015;Dbxref=GenBank:WP_037575102.1;Name=WP_037575102.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=RM615_RS06015;product=nitrate reductase subunit beta;protein_id=WP_037575102.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 64213 64788 . + . ID=gene-RM615_RS06020;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=RM615_RS06020;old_locus_tag=RM615_06020 NZ_JAVRJW010000003.1 Protein Homology CDS 64213 64788 . + 0 ID=cds-WP_037575099.1;Parent=gene-RM615_RS06020;Dbxref=GenBank:WP_037575099.1;Name=WP_037575099.1;Ontology_term=GO:0051131;gbkey=CDS;gene=narJ;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=RM615_RS06020;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_037575099.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 64781 65458 . + . ID=gene-RM615_RS06025;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=RM615_RS06025;old_locus_tag=RM615_06025 NZ_JAVRJW010000003.1 Protein Homology CDS 64781 65458 . + 0 ID=cds-WP_037575096.1;Parent=gene-RM615_RS06025;Dbxref=GenBank:WP_037575096.1;Name=WP_037575096.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=RM615_RS06025;product=respiratory nitrate reductase subunit gamma;protein_id=WP_037575096.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 65475 65936 . + . ID=gene-RM615_RS06030;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=RM615_RS06030;old_locus_tag=RM615_06030 NZ_JAVRJW010000003.1 Protein Homology CDS 65475 65936 . + 0 ID=cds-WP_037575092.1;Parent=gene-RM615_RS06030;Dbxref=GenBank:WP_037575092.1;Name=WP_037575092.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426196.1;locus_tag=RM615_RS06030;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_037575092.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 65936 66979 . + . ID=gene-RM615_RS06035;Name=RM615_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06035;old_locus_tag=RM615_06035 NZ_JAVRJW010000003.1 Protein Homology CDS 65936 66979 . + 0 ID=cds-WP_037575089.1;Parent=gene-RM615_RS06035;Dbxref=GenBank:WP_037575089.1;Name=WP_037575089.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501138.1;locus_tag=RM615_RS06035;product=sensor histidine kinase;protein_id=WP_037575089.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 66997 67647 . + . ID=gene-RM615_RS06040;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=RM615_RS06040;old_locus_tag=RM615_06040 NZ_JAVRJW010000003.1 Protein Homology CDS 66997 67647 . + 0 ID=cds-WP_103158659.1;Parent=gene-RM615_RS06040;Dbxref=GenBank:WP_103158659.1;Name=WP_103158659.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=RM615_RS06040;product=nitrate respiration regulation response regulator NreC;protein_id=WP_103158659.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 67921 69084 . + . ID=gene-RM615_RS06045;Name=RM615_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06045;old_locus_tag=RM615_06045 NZ_JAVRJW010000003.1 Protein Homology CDS 67921 69084 . + 0 ID=cds-WP_037575083.1;Parent=gene-RM615_RS06045;Dbxref=GenBank:WP_037575083.1;Name=WP_037575083.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501133.1;locus_tag=RM615_RS06045;product=nitrate/nitrite transporter;protein_id=WP_037575083.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 69139 70740 . - . ID=gene-RM615_RS06050;Name=RM615_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06050;old_locus_tag=RM615_06050 NZ_JAVRJW010000003.1 Protein Homology CDS 69139 70740 . - 0 ID=cds-WP_311540993.1;Parent=gene-RM615_RS06050;Dbxref=GenBank:WP_311540993.1;Name=WP_311540993.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999617.1;locus_tag=RM615_RS06050;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_311540993.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 70930 71286 . + . ID=gene-RM615_RS06055;Name=RM615_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06055;old_locus_tag=RM615_06055 NZ_JAVRJW010000003.1 Protein Homology CDS 70930 71286 . + 0 ID=cds-WP_037575076.1;Parent=gene-RM615_RS06055;Dbxref=GenBank:WP_037575076.1;Name=WP_037575076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=RM615_RS06055;product=DUF3139 domain-containing protein;protein_id=WP_037575076.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 71448 72521 . + . ID=gene-RM615_RS06060;Name=RM615_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06060;old_locus_tag=RM615_06060 NZ_JAVRJW010000003.1 Protein Homology CDS 71448 72521 . + 0 ID=cds-WP_107366096.1;Parent=gene-RM615_RS06060;Dbxref=GenBank:WP_107366096.1;Name=WP_107366096.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=RM615_RS06060;product=M42 family metallopeptidase;protein_id=WP_107366096.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 72677 73579 . + . ID=gene-RM615_RS06065;Name=RM615_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06065;old_locus_tag=RM615_06065 NZ_JAVRJW010000003.1 Protein Homology CDS 72677 73579 . + 0 ID=cds-WP_105963207.1;Parent=gene-RM615_RS06065;Dbxref=GenBank:WP_105963207.1;Name=WP_105963207.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479716.1;locus_tag=RM615_RS06065;product=EamA family transporter;protein_id=WP_105963207.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 73818 74165 . - . ID=gene-RM615_RS06070;Name=RM615_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06070;old_locus_tag=RM615_06070 NZ_JAVRJW010000003.1 Protein Homology CDS 73818 74165 . - 0 ID=cds-WP_105996826.1;Parent=gene-RM615_RS06070;Dbxref=GenBank:WP_105996826.1;Name=WP_105996826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426206.1;locus_tag=RM615_RS06070;product=DUF4889 domain-containing protein;protein_id=WP_105996826.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 74361 74567 . + . ID=gene-RM615_RS06075;Name=RM615_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06075;old_locus_tag=RM615_06075 NZ_JAVRJW010000003.1 Protein Homology CDS 74361 74567 . + 0 ID=cds-WP_103158654.1;Parent=gene-RM615_RS06075;Dbxref=GenBank:WP_103158654.1;Name=WP_103158654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488219.1;locus_tag=RM615_RS06075;product=sterile alpha motif-like domain-containing protein;protein_id=WP_103158654.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 74731 75936 . + . ID=gene-RM615_RS06080;Name=RM615_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06080;old_locus_tag=RM615_06080 NZ_JAVRJW010000003.1 Protein Homology CDS 74731 75936 . + 0 ID=cds-WP_105996824.1;Parent=gene-RM615_RS06080;Dbxref=GenBank:WP_105996824.1;Name=WP_105996824.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=RM615_RS06080;product=CynX/NimT family MFS transporter;protein_id=WP_105996824.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 75997 76881 . - . ID=gene-RM615_RS06085;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=RM615_RS06085;old_locus_tag=RM615_06085 NZ_JAVRJW010000003.1 Protein Homology CDS 75997 76881 . - 0 ID=cds-WP_037575060.1;Parent=gene-RM615_RS06085;Dbxref=GenBank:WP_037575060.1;Name=WP_037575060.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444225.1;locus_tag=RM615_RS06085;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_037575060.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 76972 79092 . - . ID=gene-RM615_RS06090;Name=RM615_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06090;old_locus_tag=RM615_06090 NZ_JAVRJW010000003.1 Protein Homology CDS 76972 79092 . - 0 ID=cds-WP_037575057.1;Parent=gene-RM615_RS06090;Dbxref=GenBank:WP_037575057.1;Name=WP_037575057.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.7;locus_tag=RM615_RS06090;product=helix-turn-helix domain-containing protein;protein_id=WP_037575057.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 79671 80609 . - . ID=gene-RM615_RS06095;Name=RM615_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06095;old_locus_tag=RM615_06095 NZ_JAVRJW010000003.1 Protein Homology CDS 79671 80609 . - 0 ID=cds-WP_103159531.1;Parent=gene-RM615_RS06095;Dbxref=GenBank:WP_103159531.1;Name=WP_103159531.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=RM615_RS06095;product=magnesium transporter CorA family protein;protein_id=WP_103159531.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 80602 81069 . - . ID=gene-RM615_RS06100;Name=RM615_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06100;old_locus_tag=RM615_06100 NZ_JAVRJW010000003.1 Protein Homology CDS 80602 81069 . - 0 ID=cds-WP_103159530.1;Parent=gene-RM615_RS06100;Dbxref=GenBank:WP_103159530.1;Name=WP_103159530.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=RM615_RS06100;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_103159530.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 81356 83017 . + . ID=gene-RM615_RS06105;Name=RM615_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06105;old_locus_tag=RM615_06105 NZ_JAVRJW010000003.1 Protein Homology CDS 81356 83017 . + 0 ID=cds-WP_103159534.1;Parent=gene-RM615_RS06105;Dbxref=GenBank:WP_103159534.1;Name=WP_103159534.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498664.1;locus_tag=RM615_RS06105;product=Na/Pi cotransporter family protein;protein_id=WP_103159534.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 83153 84391 . + . ID=gene-RM615_RS06110;Name=RM615_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06110;old_locus_tag=RM615_06110 NZ_JAVRJW010000003.1 Protein Homology CDS 83153 84391 . + 0 ID=cds-WP_311540994.1;Parent=gene-RM615_RS06110;Dbxref=GenBank:WP_311540994.1;Name=WP_311540994.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: protein motif:HMM:NF016149.8;locus_tag=RM615_RS06110;product=copper resistance CopC/CopD family protein;protein_id=WP_311540994.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 84424 85035 . + . ID=gene-RM615_RS06115;Name=RM615_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06115;old_locus_tag=RM615_06115 NZ_JAVRJW010000003.1 Protein Homology CDS 84424 85035 . + 0 ID=cds-WP_037575261.1;Parent=gene-RM615_RS06115;Dbxref=GenBank:WP_037575261.1;Name=WP_037575261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168199.1;locus_tag=RM615_RS06115;product=YcnI family protein;protein_id=WP_037575261.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 85102 85551 . + . ID=gene-RM615_RS06120;Name=RM615_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06120;old_locus_tag=RM615_06120 NZ_JAVRJW010000003.1 Protein Homology CDS 85102 85551 . + 0 ID=cds-WP_037575041.1;Parent=gene-RM615_RS06120;Dbxref=GenBank:WP_037575041.1;Name=WP_037575041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426215.1;locus_tag=RM615_RS06120;product=DUF2871 domain-containing protein;protein_id=WP_037575041.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 85632 86048 . - . ID=gene-RM615_RS06125;Name=RM615_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06125;old_locus_tag=RM615_06125 NZ_JAVRJW010000003.1 Protein Homology CDS 85632 86048 . - 0 ID=cds-WP_103159528.1;Parent=gene-RM615_RS06125;Dbxref=GenBank:WP_103159528.1;Name=WP_103159528.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426216.1;locus_tag=RM615_RS06125;product=GNAT family N-acetyltransferase;protein_id=WP_103159528.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 86064 87092 . - . ID=gene-RM615_RS06130;Name=RM615_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06130;old_locus_tag=RM615_06130 NZ_JAVRJW010000003.1 Protein Homology CDS 86064 87092 . - 0 ID=cds-WP_311540995.1;Parent=gene-RM615_RS06130;Dbxref=GenBank:WP_311540995.1;Name=WP_311540995.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655970.1;locus_tag=RM615_RS06130;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311540995.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 87215 88549 . - . ID=gene-RM615_RS06135;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=RM615_RS06135;old_locus_tag=RM615_06135 NZ_JAVRJW010000003.1 Protein Homology CDS 87215 88549 . - 0 ID=cds-WP_105963200.1;Parent=gene-RM615_RS06135;Dbxref=GenBank:WP_105963200.1;Name=WP_105963200.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=RM615_RS06135;product=glucose transporter GlcP;protein_id=WP_105963200.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 88798 89787 . - . ID=gene-RM615_RS06140;Name=RM615_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06140;old_locus_tag=RM615_06140 NZ_JAVRJW010000003.1 Protein Homology CDS 88798 89787 . - 0 ID=cds-WP_311540659.1;Parent=gene-RM615_RS06140;Dbxref=GenBank:WP_311540659.1;Name=WP_311540659.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=RM615_RS06140;product=acrylyl-CoA reductase family protein;protein_id=WP_311540659.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 89909 90424 . + . ID=gene-RM615_RS06145;Name=RM615_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06145;old_locus_tag=RM615_06145 NZ_JAVRJW010000003.1 Protein Homology CDS 89909 90424 . + 0 ID=cds-WP_107366847.1;Parent=gene-RM615_RS06145;Dbxref=GenBank:WP_107366847.1;Name=WP_107366847.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168205.1;locus_tag=RM615_RS06145;product=GNAT family N-acetyltransferase;protein_id=WP_107366847.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 90504 91166 . + . ID=gene-RM615_RS06150;Name=RM615_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06150;old_locus_tag=RM615_06150 NZ_JAVRJW010000003.1 Protein Homology CDS 90504 91166 . + 0 ID=cds-WP_107366846.1;Parent=gene-RM615_RS06150;Dbxref=GenBank:WP_107366846.1;Name=WP_107366846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=RM615_RS06150;product=hypothetical protein;protein_id=WP_107366846.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 91503 93104 . + . ID=gene-RM615_RS06155;Name=RM615_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06155;old_locus_tag=RM615_06155 NZ_JAVRJW010000003.1 Protein Homology CDS 91503 93104 . + 0 ID=cds-WP_105967381.1;Parent=gene-RM615_RS06155;Dbxref=GenBank:WP_105967381.1;Name=WP_105967381.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426220.1;locus_tag=RM615_RS06155;product=L-lactate permease;protein_id=WP_105967381.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 93248 94411 . - . ID=gene-RM615_RS06160;Name=RM615_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06160;old_locus_tag=RM615_06160 NZ_JAVRJW010000003.1 Protein Homology CDS 93248 94411 . - 0 ID=cds-WP_105996821.1;Parent=gene-RM615_RS06160;Dbxref=GenBank:WP_105996821.1;Name=WP_105996821.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=RM615_RS06160;product=glycosyltransferase family 4 protein;protein_id=WP_105996821.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 94758 96260 . + . ID=gene-RM615_RS06165;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=RM615_RS06165;old_locus_tag=RM615_06165 NZ_JAVRJW010000003.1 Protein Homology CDS 94758 96260 . + 0 ID=cds-WP_037575021.1;Parent=gene-RM615_RS06165;Dbxref=GenBank:WP_037575021.1;Name=WP_037575021.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=RM615_RS06165;product=malate dehydrogenase (quinone);protein_id=WP_037575021.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 96357 97730 . - . ID=gene-RM615_RS06170;Name=RM615_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06170;old_locus_tag=RM615_06170 NZ_JAVRJW010000003.1 Protein Homology CDS 96357 97730 . - 0 ID=cds-WP_037575019.1;Parent=gene-RM615_RS06170;Dbxref=GenBank:WP_037575019.1;Name=WP_037575019.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275021.1;locus_tag=RM615_RS06170;product=sensor histidine kinase;protein_id=WP_037575019.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 97723 98400 . - . ID=gene-RM615_RS06175;Name=RM615_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06175;old_locus_tag=RM615_06175 NZ_JAVRJW010000003.1 Protein Homology CDS 97723 98400 . - 0 ID=cds-WP_037575017.1;Parent=gene-RM615_RS06175;Dbxref=GenBank:WP_037575017.1;Name=WP_037575017.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=RM615_RS06175;product=response regulator transcription factor;protein_id=WP_037575017.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 98592 99653 . + . ID=gene-RM615_RS06180;Name=RM615_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06180;old_locus_tag=RM615_06180 NZ_JAVRJW010000003.1 Protein Homology CDS 98592 99653 . + 0 ID=cds-WP_311540996.1;Parent=gene-RM615_RS06180;Dbxref=GenBank:WP_311540996.1;Name=WP_311540996.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176794.1;locus_tag=RM615_RS06180;product=ABC transporter permease;protein_id=WP_311540996.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 99653 100327 . + . ID=gene-RM615_RS06185;Name=RM615_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06185;old_locus_tag=RM615_06185 NZ_JAVRJW010000003.1 Protein Homology CDS 99653 100327 . + 0 ID=cds-WP_311540997.1;Parent=gene-RM615_RS06185;Dbxref=GenBank:WP_311540997.1;Name=WP_311540997.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426229.1;locus_tag=RM615_RS06185;product=ABC transporter ATP-binding protein;protein_id=WP_311540997.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 100382 101914 . - . ID=gene-RM615_RS06190;Name=RM615_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06190;old_locus_tag=RM615_06190 NZ_JAVRJW010000003.1 Protein Homology CDS 100382 101914 . - 0 ID=cds-WP_311540998.1;Parent=gene-RM615_RS06190;Dbxref=GenBank:WP_311540998.1;Name=WP_311540998.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165510.1;locus_tag=RM615_RS06190;product=AbgT family transporter;protein_id=WP_311540998.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 101990 102691 . - . ID=gene-RM615_RS06195;Name=RM615_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06195;old_locus_tag=RM615_06195 NZ_JAVRJW010000003.1 Protein Homology CDS 101990 102691 . - 0 ID=cds-WP_182465426.1;Parent=gene-RM615_RS06195;Dbxref=GenBank:WP_182465426.1;Name=WP_182465426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014724.7;locus_tag=RM615_RS06195;product=YdcF family protein;protein_id=WP_182465426.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 103166 103624 . + . ID=gene-RM615_RS06200;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=RM615_RS06200;old_locus_tag=RM615_06200 NZ_JAVRJW010000003.1 Protein Homology CDS 103166 103624 . + 0 ID=cds-WP_311540999.1;Parent=gene-RM615_RS06200;Dbxref=GenBank:WP_311540999.1;Name=WP_311540999.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426231.1;locus_tag=RM615_RS06200;product=MarR family transcriptional regulator TcaR;protein_id=WP_311540999.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 103740 105134 . + . ID=gene-RM615_RS06205;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=RM615_RS06205;old_locus_tag=RM615_06205 NZ_JAVRJW010000003.1 Protein Homology CDS 103740 105134 . + 0 ID=cds-WP_145400523.1;Parent=gene-RM615_RS06205;Dbxref=GenBank:WP_145400523.1;Name=WP_145400523.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=RM615_RS06205;product=membrane-associated protein TcaA;protein_id=WP_145400523.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 105470 106018 . + . ID=gene-RM615_RS06210;Name=RM615_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06210;old_locus_tag=RM615_06210 NZ_JAVRJW010000003.1 Protein Homology CDS 105470 106018 . + 0 ID=cds-WP_103158955.1;Parent=gene-RM615_RS06210;Dbxref=GenBank:WP_103158955.1;Name=WP_103158955.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM615_RS06210;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103158955.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 106598 107221 . - . ID=gene-RM615_RS06215;Name=RM615_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06215;old_locus_tag=RM615_06215 NZ_JAVRJW010000003.1 Protein Homology CDS 106598 107221 . - 0 ID=cds-WP_037575004.1;Parent=gene-RM615_RS06215;Dbxref=GenBank:WP_037575004.1;Name=WP_037575004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426235.1;locus_tag=RM615_RS06215;product=hypothetical protein;protein_id=WP_037575004.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 107336 107665 . + . ID=gene-RM615_RS06220;Name=RM615_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06220;old_locus_tag=RM615_06220 NZ_JAVRJW010000003.1 Protein Homology CDS 107336 107665 . + 0 ID=cds-WP_105963190.1;Parent=gene-RM615_RS06220;Dbxref=GenBank:WP_105963190.1;Name=WP_105963190.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470023.1;locus_tag=RM615_RS06220;product=thioredoxin family protein;protein_id=WP_105963190.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 107719 108624 . + . ID=gene-RM615_RS06225;Name=RM615_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06225;old_locus_tag=RM615_06225 NZ_JAVRJW010000003.1 Protein Homology CDS 107719 108624 . + 0 ID=cds-WP_037575000.1;Parent=gene-RM615_RS06225;Dbxref=GenBank:WP_037575000.1;Name=WP_037575000.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426237.1;locus_tag=RM615_RS06225;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_037575000.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq pseudogene 108943 109041 . - . ID=gene-RM615_RS06230;Name=RM615_RS06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS06230;old_locus_tag=RM615_06230;partial=true;pseudo=true;start_range=.,108943 NZ_JAVRJW010000003.1 Protein Homology CDS 108943 109041 . - 0 ID=cds-RM615_RS06230;Parent=gene-RM615_RS06230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=RM615_RS06230;partial=true;product=hypothetical protein;pseudo=true;start_range=.,108943;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 108995 109981 . + . ID=gene-RM615_RS06235;Name=RM615_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06235;old_locus_tag=RM615_06235 NZ_JAVRJW010000003.1 Protein Homology CDS 108995 109981 . + 0 ID=cds-WP_229717311.1;Parent=gene-RM615_RS06235;Dbxref=GenBank:WP_229717311.1;Name=WP_229717311.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=RM615_RS06235;product=PTS sugar transporter subunit IIC;protein_id=WP_229717311.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 110019 110495 . - . ID=gene-RM615_RS06240;Name=RM615_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06240;old_locus_tag=RM615_06240 NZ_JAVRJW010000003.1 Protein Homology CDS 110019 110495 . - 0 ID=cds-WP_103158957.1;Parent=gene-RM615_RS06240;Dbxref=GenBank:WP_103158957.1;Name=WP_103158957.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426239.1;locus_tag=RM615_RS06240;product=thioesterase family protein;protein_id=WP_103158957.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 110622 111656 . + . ID=gene-RM615_RS06245;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=RM615_RS06245;old_locus_tag=RM615_06245 NZ_JAVRJW010000003.1 Protein Homology CDS 110622 111656 . + 0 ID=cds-WP_103158958.1;Parent=gene-RM615_RS06245;Dbxref=GenBank:WP_103158958.1;Name=WP_103158958.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=RM615_RS06245;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_103158958.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 111794 112996 . + . ID=gene-RM615_RS06250;Name=RM615_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06250;old_locus_tag=RM615_06250 NZ_JAVRJW010000003.1 Protein Homology CDS 111794 112996 . + 0 ID=cds-WP_105965501.1;Parent=gene-RM615_RS06250;Dbxref=GenBank:WP_105965501.1;Name=WP_105965501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477446.1;locus_tag=RM615_RS06250;product=GTP-binding protein;protein_id=WP_105965501.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 113120 114331 . - . ID=gene-RM615_RS06255;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=RM615_RS06255;old_locus_tag=RM615_06255 NZ_JAVRJW010000003.1 Protein Homology CDS 113120 114331 . - 0 ID=cds-WP_037574992.1;Parent=gene-RM615_RS06255;Dbxref=GenBank:WP_037574992.1;Name=WP_037574992.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=RM615_RS06255;product=sodium/glutamate symporter;protein_id=WP_037574992.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 114485 115309 . - . ID=gene-RM615_RS06260;Name=RM615_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06260;old_locus_tag=RM615_06260 NZ_JAVRJW010000003.1 Protein Homology CDS 114485 115309 . - 0 ID=cds-WP_107363530.1;Parent=gene-RM615_RS06260;Dbxref=GenBank:WP_107363530.1;Name=WP_107363530.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169591.1;locus_tag=RM615_RS06260;product=AraC family transcriptional regulator;protein_id=WP_107363530.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 115444 116265 . + . ID=gene-RM615_RS06265;Name=RM615_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06265;old_locus_tag=RM615_06265 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 115444 116265 . + 0 ID=cds-WP_105963186.1;Parent=gene-RM615_RS06265;Dbxref=GenBank:WP_105963186.1;Name=WP_105963186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06265;product=hypothetical protein;protein_id=WP_105963186.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 116429 117751 . + . ID=gene-RM615_RS06270;Name=RM615_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06270;old_locus_tag=RM615_06270 NZ_JAVRJW010000003.1 Protein Homology CDS 116429 117751 . + 0 ID=cds-WP_037574985.1;Parent=gene-RM615_RS06270;Dbxref=GenBank:WP_037574985.1;Name=WP_037574985.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426251.1;locus_tag=RM615_RS06270;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_037574985.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 117826 118434 . - . ID=gene-RM615_RS06275;Name=RM615_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06275;old_locus_tag=RM615_06275 NZ_JAVRJW010000003.1 Protein Homology CDS 117826 118434 . - 0 ID=cds-WP_037574983.1;Parent=gene-RM615_RS06275;Dbxref=GenBank:WP_037574983.1;Name=WP_037574983.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451953.1;locus_tag=RM615_RS06275;product=DNA-3-methyladenine glycosylase;protein_id=WP_037574983.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 118628 119221 . + . ID=gene-RM615_RS06280;Name=RM615_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06280;old_locus_tag=RM615_06280 NZ_JAVRJW010000003.1 Protein Homology CDS 118628 119221 . + 0 ID=cds-WP_105963185.1;Parent=gene-RM615_RS06280;Dbxref=GenBank:WP_105963185.1;Name=WP_105963185.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426253.1;locus_tag=RM615_RS06280;product=DUF805 domain-containing protein;protein_id=WP_105963185.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 119468 120367 . + . ID=gene-RM615_RS06285;Name=RM615_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06285;old_locus_tag=RM615_06285 NZ_JAVRJW010000003.1 Protein Homology CDS 119468 120367 . + 0 ID=cds-WP_107371832.1;Parent=gene-RM615_RS06285;Dbxref=GenBank:WP_107371832.1;Name=WP_107371832.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636490.1;locus_tag=RM615_RS06285;product=ABC transporter ATP-binding protein;protein_id=WP_107371832.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 120360 121595 . + . ID=gene-RM615_RS06290;Name=RM615_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06290;old_locus_tag=RM615_06290 NZ_JAVRJW010000003.1 Protein Homology CDS 120360 121595 . + 0 ID=cds-WP_037574978.1;Parent=gene-RM615_RS06290;Dbxref=GenBank:WP_037574978.1;Name=WP_037574978.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=RM615_RS06290;product=ABC transporter permease;protein_id=WP_037574978.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 121714 122046 . + . ID=gene-RM615_RS06295;Name=RM615_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06295;old_locus_tag=RM615_06295 NZ_JAVRJW010000003.1 Protein Homology CDS 121714 122046 . + 0 ID=cds-WP_103158962.1;Parent=gene-RM615_RS06295;Dbxref=GenBank:WP_103158962.1;Name=WP_103158962.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=RM615_RS06295;product=YnfA family protein;protein_id=WP_103158962.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 122202 122411 . + . ID=gene-RM615_RS06300;Name=RM615_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06300;old_locus_tag=RM615_06300 NZ_JAVRJW010000003.1 Protein Homology CDS 122202 122411 . + 0 ID=cds-WP_037574974.1;Parent=gene-RM615_RS06300;Dbxref=GenBank:WP_037574974.1;Name=WP_037574974.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479678.1;locus_tag=RM615_RS06300;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574974.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 122500 122967 . - . ID=gene-RM615_RS06305;Name=RM615_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06305;old_locus_tag=RM615_06305 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 122500 122967 . - 0 ID=cds-WP_037574972.1;Parent=gene-RM615_RS06305;Dbxref=GenBank:WP_037574972.1;Name=WP_037574972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06305;product=SRPBCC family protein;protein_id=WP_037574972.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 122985 123644 . - . ID=gene-RM615_RS06310;Name=RM615_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06310;old_locus_tag=RM615_06310 NZ_JAVRJW010000003.1 Protein Homology CDS 122985 123644 . - 0 ID=cds-WP_105965505.1;Parent=gene-RM615_RS06310;Dbxref=GenBank:WP_105965505.1;Name=WP_105965505.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169604.1;locus_tag=RM615_RS06310;product=MOSC domain-containing protein;protein_id=WP_105965505.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 123777 124466 . + . ID=gene-RM615_RS06315;Name=RM615_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06315;old_locus_tag=RM615_06315 NZ_JAVRJW010000003.1 Protein Homology CDS 123777 124466 . + 0 ID=cds-WP_037574967.1;Parent=gene-RM615_RS06315;Dbxref=GenBank:WP_037574967.1;Name=WP_037574967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=RM615_RS06315;product=ribose 5-phosphate isomerase A;protein_id=WP_037574967.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 124507 125559 . - . ID=gene-RM615_RS06320;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=RM615_RS06320;old_locus_tag=RM615_06320 NZ_JAVRJW010000003.1 Protein Homology CDS 124507 125559 . - 0 ID=cds-WP_107363524.1;Parent=gene-RM615_RS06320;Dbxref=GenBank:WP_107363524.1;Name=WP_107363524.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636483.1;locus_tag=RM615_RS06320;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_107363524.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 125819 126748 . + . ID=gene-RM615_RS06325;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=RM615_RS06325;old_locus_tag=RM615_06325 NZ_JAVRJW010000003.1 Protein Homology CDS 125819 126748 . + 0 ID=cds-WP_037574965.1;Parent=gene-RM615_RS06325;Dbxref=GenBank:WP_037574965.1;Name=WP_037574965.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=RM615_RS06325;product=formimidoylglutamase;protein_id=WP_037574965.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 126811 127689 . - . ID=gene-RM615_RS06330;Name=RM615_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06330;old_locus_tag=RM615_06330 NZ_JAVRJW010000003.1 Protein Homology CDS 126811 127689 . - 0 ID=cds-WP_037574963.1;Parent=gene-RM615_RS06330;Dbxref=GenBank:WP_037574963.1;Name=WP_037574963.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382899.1;locus_tag=RM615_RS06330;product=LysR family transcriptional regulator;protein_id=WP_037574963.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 127997 129271 . + . ID=gene-RM615_RS06335;Name=RM615_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06335;old_locus_tag=RM615_06340 NZ_JAVRJW010000003.1 Protein Homology CDS 127997 129271 . + 0 ID=cds-WP_375712998.1;Parent=gene-RM615_RS06335;Dbxref=GenBank:WP_375712998.1;Name=WP_375712998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=RM615_RS06335;product=YjiH family protein;protein_id=WP_375712998.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 129290 130957 . + . ID=gene-RM615_RS06340;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=RM615_RS06340;old_locus_tag=RM615_06345 NZ_JAVRJW010000003.1 Protein Homology CDS 129290 130957 . + 0 ID=cds-WP_037574959.1;Parent=gene-RM615_RS06340;Dbxref=GenBank:WP_037574959.1;Name=WP_037574959.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911396.1;locus_tag=RM615_RS06340;product=urocanate hydratase;protein_id=WP_037574959.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 130957 132189 . + . ID=gene-RM615_RS06345;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=RM615_RS06345;old_locus_tag=RM615_06350 NZ_JAVRJW010000003.1 Protein Homology CDS 130957 132189 . + 0 ID=cds-WP_233655010.1;Parent=gene-RM615_RS06345;Dbxref=GenBank:WP_233655010.1;Name=WP_233655010.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468897.1;locus_tag=RM615_RS06345;product=imidazolonepropionase;protein_id=WP_233655010.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 132406 133542 . + . ID=gene-RM615_RS06350;Name=RM615_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06350;old_locus_tag=RM615_06355 NZ_JAVRJW010000003.1 Protein Homology CDS 132406 133542 . + 0 ID=cds-WP_311541001.1;Parent=gene-RM615_RS06350;Dbxref=GenBank:WP_311541001.1;Name=WP_311541001.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506876.1;locus_tag=RM615_RS06350;product=SulP family inorganic anion transporter;protein_id=WP_311541001.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 133552 134682 . + . ID=gene-RM615_RS06355;Name=RM615_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06355;old_locus_tag=RM615_06360 NZ_JAVRJW010000003.1 Protein Homology CDS 133552 134682 . + 0 ID=cds-WP_311541002.1;Parent=gene-RM615_RS06355;Dbxref=GenBank:WP_311541002.1;Name=WP_311541002.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471844.1;locus_tag=RM615_RS06355;product=amidohydrolase;protein_id=WP_311541002.1;transl_table=11 NZ_JAVRJW010000003.1 cmsearch riboswitch 134728 134825 . + . ID=id-NZ_JAVRJW010000003.1:134728..134825;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000003.1 RefSeq gene 134916 136226 . + . ID=gene-RM615_RS06360;Name=RM615_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06360;old_locus_tag=RM615_06365 NZ_JAVRJW010000003.1 Protein Homology CDS 134916 136226 . + 0 ID=cds-WP_311541003.1;Parent=gene-RM615_RS06360;Dbxref=GenBank:WP_311541003.1;Name=WP_311541003.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460143.1;locus_tag=RM615_RS06360;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_311541003.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 136340 136837 . + . ID=gene-RM615_RS06365;Name=RM615_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06365;old_locus_tag=RM615_06370 NZ_JAVRJW010000003.1 Protein Homology CDS 136340 136837 . + 0 ID=cds-WP_037574951.1;Parent=gene-RM615_RS06365;Dbxref=GenBank:WP_037574951.1;Name=WP_037574951.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613136.1;locus_tag=RM615_RS06365;product=SRPBCC family protein;protein_id=WP_037574951.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 137002 137532 . - . ID=gene-RM615_RS06370;Name=RM615_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06370;old_locus_tag=RM615_06375 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 137002 137532 . - 0 ID=cds-WP_037574949.1;Parent=gene-RM615_RS06370;Dbxref=GenBank:WP_037574949.1;Name=WP_037574949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06370;product=hypothetical protein;protein_id=WP_037574949.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 137713 138660 . + . ID=gene-RM615_RS06375;Name=RM615_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06375;old_locus_tag=RM615_06380 NZ_JAVRJW010000003.1 Protein Homology CDS 137713 138660 . + 0 ID=cds-WP_105996811.1;Parent=gene-RM615_RS06375;Dbxref=GenBank:WP_105996811.1;Name=WP_105996811.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451977.1;locus_tag=RM615_RS06375;product=bile acid:sodium symporter family protein;protein_id=WP_105996811.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 138971 139240 . + . ID=gene-RM615_RS06380;Name=RM615_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06380;old_locus_tag=RM615_06385 NZ_JAVRJW010000003.1 Protein Homology CDS 138971 139240 . + 0 ID=cds-WP_037574945.1;Parent=gene-RM615_RS06380;Dbxref=GenBank:WP_037574945.1;Name=WP_037574945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=RM615_RS06380;product=hypothetical protein;protein_id=WP_037574945.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 139312 140142 . + . ID=gene-RM615_RS06385;Name=RM615_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06385;old_locus_tag=RM615_06390 NZ_JAVRJW010000003.1 Protein Homology CDS 139312 140142 . + 0 ID=cds-WP_105996810.1;Parent=gene-RM615_RS06385;Dbxref=GenBank:WP_105996810.1;Name=WP_105996810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=RM615_RS06385;product=VOC family protein;protein_id=WP_105996810.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 140205 140849 . + . ID=gene-RM615_RS06390;Name=RM615_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06390;old_locus_tag=RM615_06395 NZ_JAVRJW010000003.1 Protein Homology CDS 140205 140849 . + 0 ID=cds-WP_105996809.1;Parent=gene-RM615_RS06390;Dbxref=GenBank:WP_105996809.1;Name=WP_105996809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=RM615_RS06390;product=HAD family hydrolase;protein_id=WP_105996809.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 140846 141037 . + . ID=gene-RM615_RS06395;Name=RM615_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06395;old_locus_tag=RM615_06400 NZ_JAVRJW010000003.1 Protein Homology CDS 140846 141037 . + 0 ID=cds-WP_037574938.1;Parent=gene-RM615_RS06395;Dbxref=GenBank:WP_037574938.1;Name=WP_037574938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=RM615_RS06395;product=hypothetical protein;protein_id=WP_037574938.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 141141 141326 . - . ID=gene-RM615_RS06400;Name=RM615_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06400;old_locus_tag=RM615_06405 NZ_JAVRJW010000003.1 Protein Homology CDS 141141 141326 . - 0 ID=cds-WP_259336365.1;Parent=gene-RM615_RS06400;Dbxref=GenBank:WP_259336365.1;Name=WP_259336365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=RM615_RS06400;product=hypothetical protein;protein_id=WP_259336365.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 141326 141664 . - . ID=gene-RM615_RS06405;Name=RM615_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06405;old_locus_tag=RM615_06410 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 141326 141664 . - 0 ID=cds-WP_105963173.1;Parent=gene-RM615_RS06405;Dbxref=GenBank:WP_105963173.1;Name=WP_105963173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06405;product=hypothetical protein;protein_id=WP_105963173.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 141721 142548 . - . ID=gene-RM615_RS06410;Name=RM615_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06410;old_locus_tag=RM615_06415 NZ_JAVRJW010000003.1 Protein Homology CDS 141721 142548 . - 0 ID=cds-WP_311541004.1;Parent=gene-RM615_RS06410;Dbxref=GenBank:WP_311541004.1;Name=WP_311541004.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=RM615_RS06410;product=formate/nitrite transporter family protein;protein_id=WP_311541004.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 142878 144269 . + . ID=gene-RM615_RS06415;Name=RM615_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06415;old_locus_tag=RM615_06420 NZ_JAVRJW010000003.1 Protein Homology CDS 142878 144269 . + 0 ID=cds-WP_105963171.1;Parent=gene-RM615_RS06415;Dbxref=GenBank:WP_105963171.1;Name=WP_105963171.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=RM615_RS06415;product=amino acid permease;protein_id=WP_105963171.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 144521 145930 . - . ID=gene-RM615_RS06420;Name=RM615_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06420;old_locus_tag=RM615_06425 NZ_JAVRJW010000003.1 Protein Homology CDS 144521 145930 . - 0 ID=cds-WP_105996808.1;Parent=gene-RM615_RS06420;Dbxref=GenBank:WP_105996808.1;Name=WP_105996808.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432328.1;locus_tag=RM615_RS06420;product=PTS transporter subunit EIIC;protein_id=WP_105996808.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 145947 146834 . - . ID=gene-RM615_RS06425;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=RM615_RS06425;old_locus_tag=RM615_06430 NZ_JAVRJW010000003.1 Protein Homology CDS 145947 146834 . - 0 ID=cds-WP_037574924.1;Parent=gene-RM615_RS06425;Dbxref=GenBank:WP_037574924.1;Name=WP_037574924.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510093.1;locus_tag=RM615_RS06425;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_037574924.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 146815 147882 . - . ID=gene-RM615_RS06430;Name=RM615_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06430;old_locus_tag=RM615_06435 NZ_JAVRJW010000003.1 Protein Homology CDS 146815 147882 . - 0 ID=cds-WP_311541005.1;Parent=gene-RM615_RS06430;Dbxref=GenBank:WP_311541005.1;Name=WP_311541005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039260.6;locus_tag=RM615_RS06430;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_311541005.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 147966 148298 . - . ID=gene-RM615_RS06435;Name=RM615_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06435;old_locus_tag=RM615_06440 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 147966 148298 . - 0 ID=cds-WP_107360555.1;Parent=gene-RM615_RS06435;Dbxref=GenBank:WP_107360555.1;Name=WP_107360555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06435;product=hypothetical protein;protein_id=WP_107360555.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 148390 149121 . + . ID=gene-RM615_RS06440;Name=RM615_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06440;old_locus_tag=RM615_06445 NZ_JAVRJW010000003.1 Protein Homology CDS 148390 149121 . + 0 ID=cds-WP_103158981.1;Parent=gene-RM615_RS06440;Dbxref=GenBank:WP_103158981.1;Name=WP_103158981.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426283.1;locus_tag=RM615_RS06440;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_103158981.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 149425 150120 . - . ID=gene-RM615_RS06445;Name=RM615_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06445;old_locus_tag=RM615_06450 NZ_JAVRJW010000003.1 Protein Homology CDS 149425 150120 . - 0 ID=cds-WP_037574913.1;Parent=gene-RM615_RS06445;Dbxref=GenBank:WP_037574913.1;Name=WP_037574913.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=RM615_RS06445;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574913.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 150585 151379 . + . ID=gene-RM615_RS06450;Name=RM615_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06450;old_locus_tag=RM615_06455 NZ_JAVRJW010000003.1 Protein Homology CDS 150585 151379 . + 0 ID=cds-WP_107366898.1;Parent=gene-RM615_RS06450;Dbxref=GenBank:WP_107366898.1;Name=WP_107366898.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613150.1;locus_tag=RM615_RS06450;product=inositol monophosphatase family protein;protein_id=WP_107366898.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 151528 152442 . + . ID=gene-RM615_RS06455;Name=RM615_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06455;old_locus_tag=RM615_06460 NZ_JAVRJW010000003.1 Protein Homology CDS 151528 152442 . + 0 ID=cds-WP_107370356.1;Parent=gene-RM615_RS06455;Dbxref=GenBank:WP_107370356.1;Name=WP_107370356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460126.1;locus_tag=RM615_RS06455;product=LCP family glycopolymer transferase;protein_id=WP_107370356.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq pseudogene 152539 153180 . + . ID=gene-RM615_RS06460;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=pseudogene;locus_tag=RM615_RS06460;old_locus_tag=RM615_06465;pseudo=true NZ_JAVRJW010000003.1 Protein Homology CDS 152539 153180 . + 0 ID=cds-RM615_RS06460;Parent=gene-RM615_RS06460;Note=internal stop;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503506.1;locus_tag=RM615_RS06460;product=pyroglutamyl-peptidase I;pseudo=true;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 153353 156289 . + . ID=gene-RM615_RS06465;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=RM615_RS06465;old_locus_tag=RM615_06470 NZ_JAVRJW010000003.1 Protein Homology CDS 153353 156289 . + 0 ID=cds-WP_105963164.1;Parent=gene-RM615_RS06465;Dbxref=GenBank:WP_105963164.1;Name=WP_105963164.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=RM615_RS06465;product=formate dehydrogenase subunit alpha;protein_id=WP_105963164.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 156289 156753 . + . ID=gene-RM615_RS06470;Name=RM615_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06470;old_locus_tag=RM615_06475 NZ_JAVRJW010000003.1 Protein Homology CDS 156289 156753 . + 0 ID=cds-WP_037574902.1;Parent=gene-RM615_RS06470;Dbxref=GenBank:WP_037574902.1;Name=WP_037574902.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506903.1;locus_tag=RM615_RS06470;product=helical membrane plugin domain-containing protein;protein_id=WP_037574902.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 156867 157109 . + . ID=gene-RM615_RS06475;Name=RM615_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06475;old_locus_tag=RM615_06480 NZ_JAVRJW010000003.1 Protein Homology CDS 156867 157109 . + 0 ID=cds-WP_037574900.1;Parent=gene-RM615_RS06475;Dbxref=GenBank:WP_037574900.1;Name=WP_037574900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=RM615_RS06475;product=hypothetical protein;protein_id=WP_037574900.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 157136 157918 . + . ID=gene-RM615_RS06480;Name=RM615_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06480;old_locus_tag=RM615_06485 NZ_JAVRJW010000003.1 Protein Homology CDS 157136 157918 . + 0 ID=cds-WP_105967392.1;Parent=gene-RM615_RS06480;Dbxref=GenBank:WP_105967392.1;Name=WP_105967392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739218.1;locus_tag=RM615_RS06480;product=N-acetylglucosaminidase;protein_id=WP_105967392.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 158049 159173 . + . ID=gene-RM615_RS06485;Name=RM615_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06485;old_locus_tag=RM615_06490 NZ_JAVRJW010000003.1 Protein Homology CDS 158049 159173 . + 0 ID=cds-WP_107370343.1;Parent=gene-RM615_RS06485;Dbxref=GenBank:WP_107370343.1;Name=WP_107370343.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382869.1;locus_tag=RM615_RS06485;product=FAD-dependent monooxygenase;protein_id=WP_107370343.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 159248 160204 . - . ID=gene-RM615_RS06490;Name=RM615_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06490;old_locus_tag=RM615_06495 NZ_JAVRJW010000003.1 Protein Homology CDS 159248 160204 . - 0 ID=cds-WP_107370344.1;Parent=gene-RM615_RS06490;Dbxref=GenBank:WP_107370344.1;Name=WP_107370344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275076.1;locus_tag=RM615_RS06490;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_107370344.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 160410 160979 . - . ID=gene-RM615_RS06495;Name=RM615_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06495;old_locus_tag=RM615_06500 NZ_JAVRJW010000003.1 Protein Homology CDS 160410 160979 . - 0 ID=cds-WP_037574890.1;Parent=gene-RM615_RS06495;Dbxref=GenBank:WP_037574890.1;Name=WP_037574890.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=RM615_RS06495;product=CHAP domain-containing protein;protein_id=WP_037574890.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 161377 161754 . - . ID=gene-RM615_RS06500;Name=RM615_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06500;old_locus_tag=RM615_06505 NZ_JAVRJW010000003.1 Protein Homology CDS 161377 161754 . - 0 ID=cds-WP_037574888.1;Parent=gene-RM615_RS06500;Dbxref=GenBank:WP_037574888.1;Name=WP_037574888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465507.1;locus_tag=RM615_RS06500;product=DUF4870 domain-containing protein;protein_id=WP_037574888.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 161945 163021 . + . ID=gene-RM615_RS06505;Name=RM615_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06505;old_locus_tag=RM615_06510 NZ_JAVRJW010000003.1 Protein Homology CDS 161945 163021 . + 0 ID=cds-WP_105963160.1;Parent=gene-RM615_RS06505;Dbxref=GenBank:WP_105963160.1;Name=WP_105963160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=RM615_RS06505;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_105963160.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq pseudogene 163042 164453 . + . ID=gene-RM615_RS06510;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=pseudogene;locus_tag=RM615_RS06510;old_locus_tag=RM615_06515;pseudo=true NZ_JAVRJW010000003.1 Protein Homology CDS 163042 164453 . + 0 ID=cds-RM615_RS06510;Parent=gene-RM615_RS06510;Note=frameshifted;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471352.1;locus_tag=RM615_RS06510;product=Na+/H+ antiporter NhaC;pseudo=true;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 164578 165051 . + . ID=gene-RM615_RS06515;Name=RM615_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06515;old_locus_tag=RM615_06520 NZ_JAVRJW010000003.1 Protein Homology CDS 164578 165051 . + 0 ID=cds-WP_107370345.1;Parent=gene-RM615_RS06515;Dbxref=GenBank:WP_107370345.1;Name=WP_107370345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=RM615_RS06515;product=hypothetical protein;protein_id=WP_107370345.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 165194 165976 . - . ID=gene-RM615_RS06520;Name=RM615_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06520;old_locus_tag=RM615_06525 NZ_JAVRJW010000003.1 Protein Homology CDS 165194 165976 . - 0 ID=cds-WP_105963158.1;Parent=gene-RM615_RS06520;Dbxref=GenBank:WP_105963158.1;Name=WP_105963158.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717383.1;locus_tag=RM615_RS06520;product=CHAP domain-containing protein;protein_id=WP_105963158.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 166430 166774 . + . ID=gene-RM615_RS06525;Name=RM615_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06525;old_locus_tag=RM615_06530 NZ_JAVRJW010000003.1 Protein Homology CDS 166430 166774 . + 0 ID=cds-WP_103158991.1;Parent=gene-RM615_RS06525;Dbxref=GenBank:WP_103158991.1;Name=WP_103158991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461846.1;locus_tag=RM615_RS06525;product=PH domain-containing protein;protein_id=WP_103158991.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 166904 167953 . + . ID=gene-RM615_RS06530;Name=RM615_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06530;old_locus_tag=RM615_06535 NZ_JAVRJW010000003.1 Protein Homology CDS 166904 167953 . + 0 ID=cds-WP_037574872.1;Parent=gene-RM615_RS06530;Dbxref=GenBank:WP_037574872.1;Name=WP_037574872.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=RM615_RS06530;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037574872.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 167972 168325 . + . ID=gene-RM615_RS06535;Name=RM615_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06535;old_locus_tag=RM615_06540 NZ_JAVRJW010000003.1 Protein Homology CDS 167972 168325 . + 0 ID=cds-WP_105965523.1;Parent=gene-RM615_RS06535;Dbxref=GenBank:WP_105965523.1;Name=WP_105965523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166576.1;locus_tag=RM615_RS06535;product=DoxX family protein;protein_id=WP_105965523.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 168584 168931 . + . ID=gene-RM615_RS06540;Name=RM615_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06540;old_locus_tag=RM615_06545 NZ_JAVRJW010000003.1 Protein Homology CDS 168584 168931 . + 0 ID=cds-WP_037574867.1;Parent=gene-RM615_RS06540;Dbxref=GenBank:WP_037574867.1;Name=WP_037574867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=RM615_RS06540;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037574867.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 169196 170362 . + . ID=gene-RM615_RS06545;Name=RM615_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06545;old_locus_tag=RM615_06550 NZ_JAVRJW010000003.1 Protein Homology CDS 169196 170362 . + 0 ID=cds-WP_105965524.1;Parent=gene-RM615_RS06545;Dbxref=GenBank:WP_105965524.1;Name=WP_105965524.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169652.1;locus_tag=RM615_RS06545;product=acyl-CoA dehydrogenase family protein;protein_id=WP_105965524.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 170450 170845 . + . ID=gene-RM615_RS06550;Name=RM615_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06550;old_locus_tag=RM615_06555 NZ_JAVRJW010000003.1 Protein Homology CDS 170450 170845 . + 0 ID=cds-WP_037574862.1;Parent=gene-RM615_RS06550;Dbxref=GenBank:WP_037574862.1;Name=WP_037574862.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=RM615_RS06550;product=YbaN family protein;protein_id=WP_037574862.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 171033 171947 . + . ID=gene-RM615_RS06555;Name=RM615_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06555;old_locus_tag=RM615_06560 NZ_JAVRJW010000003.1 Protein Homology CDS 171033 171947 . + 0 ID=cds-WP_107370348.1;Parent=gene-RM615_RS06555;Dbxref=GenBank:WP_107370348.1;Name=WP_107370348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471258.1;locus_tag=RM615_RS06555;product=ABC transporter substrate-binding protein;protein_id=WP_107370348.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 172276 172830 . + . ID=gene-RM615_RS06560;Name=RM615_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06560;old_locus_tag=RM615_06565 NZ_JAVRJW010000003.1 Protein Homology CDS 172276 172830 . + 0 ID=cds-WP_037574857.1;Parent=gene-RM615_RS06560;Dbxref=GenBank:WP_037574857.1;Name=WP_037574857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=RM615_RS06560;product=biotin transporter BioY;protein_id=WP_037574857.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 172855 173613 . + . ID=gene-RM615_RS06565;Name=RM615_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06565;old_locus_tag=RM615_06570 NZ_JAVRJW010000003.1 Protein Homology CDS 172855 173613 . + 0 ID=cds-WP_241954937.1;Parent=gene-RM615_RS06565;Dbxref=GenBank:WP_241954937.1;Name=WP_241954937.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426315.1;locus_tag=RM615_RS06565;product=GNAT family N-acetyltransferase;protein_id=WP_241954937.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 173685 174482 . - . ID=gene-RM615_RS06570;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=RM615_RS06570;old_locus_tag=RM615_06575 NZ_JAVRJW010000003.1 Protein Homology CDS 173685 174482 . - 0 ID=cds-WP_037574851.1;Parent=gene-RM615_RS06570;Dbxref=GenBank:WP_037574851.1;Name=WP_037574851.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501012.1;locus_tag=RM615_RS06570;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_037574851.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 174671 175444 . + . ID=gene-RM615_RS06575;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=RM615_RS06575;old_locus_tag=RM615_06580 NZ_JAVRJW010000003.1 Protein Homology CDS 174671 175444 . + 0 ID=cds-WP_311541007.1;Parent=gene-RM615_RS06575;Dbxref=GenBank:WP_311541007.1;Name=WP_311541007.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=RM615_RS06575;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_311541007.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 175453 176124 . + . ID=gene-RM615_RS06580;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=RM615_RS06580;old_locus_tag=RM615_06585 NZ_JAVRJW010000003.1 Protein Homology CDS 175453 176124 . + 0 ID=cds-WP_037574845.1;Parent=gene-RM615_RS06580;Dbxref=GenBank:WP_037574845.1;Name=WP_037574845.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113094.1;locus_tag=RM615_RS06580;product=molybdate ABC transporter permease subunit;protein_id=WP_037574845.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 176125 176751 . + . ID=gene-RM615_RS06585;Name=RM615_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06585;old_locus_tag=RM615_06590 NZ_JAVRJW010000003.1 Protein Homology CDS 176125 176751 . + 0 ID=cds-WP_037574842.1;Parent=gene-RM615_RS06585;Dbxref=GenBank:WP_037574842.1;Name=WP_037574842.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=RM615_RS06585;product=ATP-binding cassette domain-containing protein;protein_id=WP_037574842.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 176959 177963 . + . ID=gene-RM615_RS06590;Name=RM615_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06590;old_locus_tag=RM615_06595 NZ_JAVRJW010000003.1 Protein Homology CDS 176959 177963 . + 0 ID=cds-WP_037574840.1;Parent=gene-RM615_RS06590;Dbxref=GenBank:WP_037574840.1;Name=WP_037574840.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453805.1;locus_tag=RM615_RS06590;product=ThiF family adenylyltransferase;protein_id=WP_037574840.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 177976 178476 . + . ID=gene-RM615_RS06595;Name=RM615_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06595;old_locus_tag=RM615_06600 NZ_JAVRJW010000003.1 Protein Homology CDS 177976 178476 . + 0 ID=cds-WP_103158996.1;Parent=gene-RM615_RS06595;Dbxref=GenBank:WP_103158996.1;Name=WP_103158996.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382827.1;locus_tag=RM615_RS06595;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_103158996.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 178559 179041 . - . ID=gene-RM615_RS06600;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=RM615_RS06600;old_locus_tag=RM615_06605 NZ_JAVRJW010000003.1 Protein Homology CDS 178559 179041 . - 0 ID=cds-WP_037574834.1;Parent=gene-RM615_RS06600;Dbxref=GenBank:WP_037574834.1;Name=WP_037574834.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722900.1;locus_tag=RM615_RS06600;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_037574834.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 179110 180369 . + . ID=gene-RM615_RS06605;Name=RM615_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06605;old_locus_tag=RM615_06610 NZ_JAVRJW010000003.1 Protein Homology CDS 179110 180369 . + 0 ID=cds-WP_107366054.1;Parent=gene-RM615_RS06605;Dbxref=GenBank:WP_107366054.1;Name=WP_107366054.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382825.1;locus_tag=RM615_RS06605;product=molybdopterin molybdotransferase MoeA;protein_id=WP_107366054.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 180366 180845 . + . ID=gene-RM615_RS06610;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=RM615_RS06610;old_locus_tag=RM615_06615 NZ_JAVRJW010000003.1 Protein Homology CDS 180366 180845 . + 0 ID=cds-WP_037574828.1;Parent=gene-RM615_RS06610;Dbxref=GenBank:WP_037574828.1;Name=WP_037574828.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479599.1;locus_tag=RM615_RS06610;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_037574828.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 180847 181299 . + . ID=gene-RM615_RS06615;Name=RM615_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06615;old_locus_tag=RM615_06620 NZ_JAVRJW010000003.1 Protein Homology CDS 180847 181299 . + 0 ID=cds-WP_037574826.1;Parent=gene-RM615_RS06615;Dbxref=GenBank:WP_037574826.1;Name=WP_037574826.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506945.1;locus_tag=RM615_RS06615;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_037574826.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 181296 181529 . + . ID=gene-RM615_RS06620;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=RM615_RS06620;old_locus_tag=RM615_06625 NZ_JAVRJW010000003.1 Protein Homology CDS 181296 181529 . + 0 ID=cds-WP_037574823.1;Parent=gene-RM615_RS06620;Dbxref=GenBank:WP_037574823.1;Name=WP_037574823.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=RM615_RS06620;product=molybdopterin converting factor subunit 1;protein_id=WP_037574823.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 181539 182147 . + . ID=gene-RM615_RS06625;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=RM615_RS06625;old_locus_tag=RM615_06630 NZ_JAVRJW010000003.1 Protein Homology CDS 181539 182147 . + 0 ID=cds-WP_037574821.1;Parent=gene-RM615_RS06625;Dbxref=GenBank:WP_037574821.1;Name=WP_037574821.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509294.1;locus_tag=RM615_RS06625;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_037574821.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 182162 183184 . + . ID=gene-RM615_RS06630;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=RM615_RS06630;old_locus_tag=RM615_06635 NZ_JAVRJW010000003.1 Protein Homology CDS 182162 183184 . + 0 ID=cds-WP_037574818.1;Parent=gene-RM615_RS06630;Dbxref=GenBank:WP_037574818.1;Name=WP_037574818.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=RM615_RS06630;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_037574818.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 183303 185135 . - . ID=gene-RM615_RS06635;Name=RM615_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06635;old_locus_tag=RM615_06640 NZ_JAVRJW010000003.1 Protein Homology CDS 183303 185135 . - 0 ID=cds-WP_103159000.1;Parent=gene-RM615_RS06635;Dbxref=GenBank:WP_103159000.1;Name=WP_103159000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169680.1;locus_tag=RM615_RS06635;product=DUF8508 domain-containing protein;protein_id=WP_103159000.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 185333 185776 . - . ID=gene-RM615_RS06640;Name=RM615_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06640;old_locus_tag=RM615_06645 NZ_JAVRJW010000003.1 Protein Homology CDS 185333 185776 . - 0 ID=cds-WP_105965528.1;Parent=gene-RM615_RS06640;Dbxref=GenBank:WP_105965528.1;Name=WP_105965528.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169682.1;locus_tag=RM615_RS06640;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_105965528.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 186003 186770 . + . ID=gene-RM615_RS06645;Name=RM615_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06645;old_locus_tag=RM615_06650 NZ_JAVRJW010000003.1 Protein Homology CDS 186003 186770 . + 0 ID=cds-WP_103159001.1;Parent=gene-RM615_RS06645;Dbxref=GenBank:WP_103159001.1;Name=WP_103159001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426336.1;locus_tag=RM615_RS06645;product=VOC family protein;protein_id=WP_103159001.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 186761 187015 . - . ID=gene-RM615_RS06650;Name=RM615_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06650;old_locus_tag=RM615_06655 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 186761 187015 . - 0 ID=cds-WP_103159002.1;Parent=gene-RM615_RS06650;Dbxref=GenBank:WP_103159002.1;Name=WP_103159002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06650;product=hypothetical protein;protein_id=WP_103159002.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 187125 188375 . + . ID=gene-RM615_RS06655;Name=RM615_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06655;old_locus_tag=RM615_06660 NZ_JAVRJW010000003.1 Protein Homology CDS 187125 188375 . + 0 ID=cds-WP_105965940.1;Parent=gene-RM615_RS06655;Dbxref=GenBank:WP_105965940.1;Name=WP_105965940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506953.1;locus_tag=RM615_RS06655;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_105965940.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 188759 191914 . + . ID=gene-RM615_RS06660;Name=RM615_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06660;old_locus_tag=RM615_06665 NZ_JAVRJW010000003.1 Protein Homology CDS 188759 191914 . + 0 ID=cds-WP_037574809.1;Parent=gene-RM615_RS06660;Dbxref=GenBank:WP_037574809.1;Name=WP_037574809.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=RM615_RS06660;product=efflux RND transporter permease subunit;protein_id=WP_037574809.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 192160 193311 . + . ID=gene-RM615_RS06665;Name=RM615_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06665;old_locus_tag=RM615_06670 NZ_JAVRJW010000003.1 Protein Homology CDS 192160 193311 . + 0 ID=cds-WP_037574807.1;Parent=gene-RM615_RS06665;Dbxref=GenBank:WP_037574807.1;Name=WP_037574807.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723795.1;locus_tag=RM615_RS06665;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_037574807.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 193378 193695 . - . ID=gene-RM615_RS06670;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=RM615_RS06670;old_locus_tag=RM615_06675 NZ_JAVRJW010000003.1 Protein Homology CDS 193378 193695 . - 0 ID=cds-WP_037574805.1;Parent=gene-RM615_RS06670;Dbxref=GenBank:WP_037574805.1;Name=WP_037574805.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=RM615_RS06670;product=membrane stabilizing protein MspA;protein_id=WP_037574805.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 193738 193911 . - . ID=gene-RM615_RS06675;Name=RM615_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06675;old_locus_tag=RM615_06680 NZ_JAVRJW010000003.1 Protein Homology CDS 193738 193911 . - 0 ID=cds-WP_169301477.1;Parent=gene-RM615_RS06675;Dbxref=GenBank:WP_169301477.1;Name=WP_169301477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500988.1;locus_tag=RM615_RS06675;product=SE1832 family protein;protein_id=WP_169301477.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 194038 194952 . + . ID=gene-RM615_RS06680;Name=RM615_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06680;old_locus_tag=RM615_06685 NZ_JAVRJW010000003.1 Protein Homology CDS 194038 194952 . + 0 ID=cds-WP_037574803.1;Parent=gene-RM615_RS06680;Dbxref=GenBank:WP_037574803.1;Name=WP_037574803.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488634.1;locus_tag=RM615_RS06680;product=AEC family transporter;protein_id=WP_037574803.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 194991 195851 . - . ID=gene-RM615_RS06685;Name=RM615_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06685;old_locus_tag=RM615_06690 NZ_JAVRJW010000003.1 Protein Homology CDS 194991 195851 . - 0 ID=cds-WP_037574801.1;Parent=gene-RM615_RS06685;Dbxref=GenBank:WP_037574801.1;Name=WP_037574801.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=RM615_RS06685;product=GNAT family N-acetyltransferase;protein_id=WP_037574801.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 195973 198105 . + . ID=gene-RM615_RS06690;Name=RM615_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06690;old_locus_tag=RM615_06695 NZ_JAVRJW010000003.1 Protein Homology CDS 195973 198105 . + 0 ID=cds-WP_037574799.1;Parent=gene-RM615_RS06690;Dbxref=GenBank:WP_037574799.1;Name=WP_037574799.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838504.1;locus_tag=RM615_RS06690;product=DNA topoisomerase III;protein_id=WP_037574799.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 198217 199551 . + . ID=gene-RM615_RS06695;Name=RM615_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06695;old_locus_tag=RM615_06700 NZ_JAVRJW010000003.1 Protein Homology CDS 198217 199551 . + 0 ID=cds-WP_311541008.1;Parent=gene-RM615_RS06695;Dbxref=GenBank:WP_311541008.1;Name=WP_311541008.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=RM615_RS06695;product=NCS2 family permease;protein_id=WP_311541008.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 200010 200318 . + . ID=gene-RM615_RS06700;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=RM615_RS06700;old_locus_tag=RM615_06705 NZ_JAVRJW010000003.1 Protein Homology CDS 200010 200318 . + 0 ID=cds-WP_001118667.1;Parent=gene-RM615_RS06700;Dbxref=GenBank:WP_001118667.1;Name=WP_001118667.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=RM615_RS06700;product=30S ribosomal protein S10;protein_id=WP_001118667.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 200346 201005 . + . ID=gene-RM615_RS06705;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=RM615_RS06705;old_locus_tag=RM615_06710 NZ_JAVRJW010000003.1 Protein Homology CDS 200346 201005 . + 0 ID=cds-WP_037574795.1;Parent=gene-RM615_RS06705;Dbxref=GenBank:WP_037574795.1;Name=WP_037574795.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=RM615_RS06705;product=50S ribosomal protein L3;protein_id=WP_037574795.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 201032 201655 . + . ID=gene-RM615_RS06710;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=RM615_RS06710;old_locus_tag=RM615_06715 NZ_JAVRJW010000003.1 Protein Homology CDS 201032 201655 . + 0 ID=cds-WP_037574793.1;Parent=gene-RM615_RS06710;Dbxref=GenBank:WP_037574793.1;Name=WP_037574793.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=RM615_RS06710;product=50S ribosomal protein L4;protein_id=WP_037574793.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 201655 201930 . + . ID=gene-RM615_RS06715;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=RM615_RS06715;old_locus_tag=RM615_06720 NZ_JAVRJW010000003.1 Protein Homology CDS 201655 201930 . + 0 ID=cds-WP_037567103.1;Parent=gene-RM615_RS06715;Dbxref=GenBank:WP_037567103.1;Name=WP_037567103.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=RM615_RS06715;product=50S ribosomal protein L23;protein_id=WP_037567103.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 201960 202793 . + . ID=gene-RM615_RS06720;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=RM615_RS06720;old_locus_tag=RM615_06725 NZ_JAVRJW010000003.1 Protein Homology CDS 201960 202793 . + 0 ID=cds-WP_037574791.1;Parent=gene-RM615_RS06720;Dbxref=GenBank:WP_037574791.1;Name=WP_037574791.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=RM615_RS06720;product=50S ribosomal protein L2;protein_id=WP_037574791.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 202858 203136 . + . ID=gene-RM615_RS06725;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=RM615_RS06725;old_locus_tag=RM615_06730 NZ_JAVRJW010000003.1 Protein Homology CDS 202858 203136 . + 0 ID=cds-WP_014613216.1;Parent=gene-RM615_RS06725;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=RM615_RS06725;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 203163 203516 . + . ID=gene-RM615_RS06730;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=RM615_RS06730;old_locus_tag=RM615_06735 NZ_JAVRJW010000003.1 Protein Homology CDS 203163 203516 . + 0 ID=cds-WP_037574789.1;Parent=gene-RM615_RS06730;Dbxref=GenBank:WP_037574789.1;Name=WP_037574789.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=RM615_RS06730;product=50S ribosomal protein L22;protein_id=WP_037574789.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 203539 204192 . + . ID=gene-RM615_RS06735;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=RM615_RS06735;old_locus_tag=RM615_06740 NZ_JAVRJW010000003.1 Protein Homology CDS 203539 204192 . + 0 ID=cds-WP_037574787.1;Parent=gene-RM615_RS06735;Dbxref=GenBank:WP_037574787.1;Name=WP_037574787.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=RM615_RS06735;product=30S ribosomal protein S3;protein_id=WP_037574787.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 204195 204629 . + . ID=gene-RM615_RS06740;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=RM615_RS06740;old_locus_tag=RM615_06745 NZ_JAVRJW010000003.1 Protein Homology CDS 204195 204629 . + 0 ID=cds-WP_037567112.1;Parent=gene-RM615_RS06740;Dbxref=GenBank:WP_037567112.1;Name=WP_037567112.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=RM615_RS06740;product=50S ribosomal protein L16;protein_id=WP_037567112.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 204619 204828 . + . ID=gene-RM615_RS06745;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=RM615_RS06745;old_locus_tag=RM615_06750 NZ_JAVRJW010000003.1 Protein Homology CDS 204619 204828 . + 0 ID=cds-WP_014613220.1;Parent=gene-RM615_RS06745;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=RM615_RS06745;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 204853 205116 . + . ID=gene-RM615_RS06750;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=RM615_RS06750;old_locus_tag=RM615_06755 NZ_JAVRJW010000003.1 Protein Homology CDS 204853 205116 . + 0 ID=cds-WP_037567114.1;Parent=gene-RM615_RS06750;Dbxref=GenBank:WP_037567114.1;Name=WP_037567114.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=RM615_RS06750;product=30S ribosomal protein S17;protein_id=WP_037567114.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 205147 205515 . + . ID=gene-RM615_RS06755;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=RM615_RS06755;old_locus_tag=RM615_06760 NZ_JAVRJW010000003.1 Protein Homology CDS 205147 205515 . + 0 ID=cds-WP_014613222.1;Parent=gene-RM615_RS06755;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=RM615_RS06755;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 205554 205871 . + . ID=gene-RM615_RS06760;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=RM615_RS06760;old_locus_tag=RM615_06765 NZ_JAVRJW010000003.1 Protein Homology CDS 205554 205871 . + 0 ID=cds-WP_311541009.1;Parent=gene-RM615_RS06760;Dbxref=GenBank:WP_311541009.1;Name=WP_311541009.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911103.1;locus_tag=RM615_RS06760;product=50S ribosomal protein L24;protein_id=WP_311541009.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 205896 206435 . + . ID=gene-RM615_RS06765;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=RM615_RS06765;old_locus_tag=RM615_06770 NZ_JAVRJW010000003.1 Protein Homology CDS 205896 206435 . + 0 ID=cds-WP_037574785.1;Parent=gene-RM615_RS06765;Dbxref=GenBank:WP_037574785.1;Name=WP_037574785.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=RM615_RS06765;product=50S ribosomal protein L5;protein_id=WP_037574785.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 206457 206642 . + . ID=gene-RM615_RS06770;Name=RM615_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06770;old_locus_tag=RM615_06775 NZ_JAVRJW010000003.1 Protein Homology CDS 206457 206642 . + 0 ID=cds-WP_037574783.1;Parent=gene-RM615_RS06770;Dbxref=GenBank:WP_037574783.1;Name=WP_037574783.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=RM615_RS06770;product=type Z 30S ribosomal protein S14;protein_id=WP_037574783.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 206674 207072 . + . ID=gene-RM615_RS06775;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=RM615_RS06775;old_locus_tag=RM615_06780 NZ_JAVRJW010000003.1 Protein Homology CDS 206674 207072 . + 0 ID=cds-WP_037574781.1;Parent=gene-RM615_RS06775;Dbxref=GenBank:WP_037574781.1;Name=WP_037574781.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=RM615_RS06775;product=30S ribosomal protein S8;protein_id=WP_037574781.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 207102 207638 . + . ID=gene-RM615_RS06780;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=RM615_RS06780;old_locus_tag=RM615_06785 NZ_JAVRJW010000003.1 Protein Homology CDS 207102 207638 . + 0 ID=cds-WP_037567123.1;Parent=gene-RM615_RS06780;Dbxref=GenBank:WP_037567123.1;Name=WP_037567123.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=RM615_RS06780;product=50S ribosomal protein L6;protein_id=WP_037567123.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 207669 208028 . + . ID=gene-RM615_RS06785;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=RM615_RS06785;old_locus_tag=RM615_06790 NZ_JAVRJW010000003.1 Protein Homology CDS 207669 208028 . + 0 ID=cds-WP_037574779.1;Parent=gene-RM615_RS06785;Dbxref=GenBank:WP_037574779.1;Name=WP_037574779.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500963.1;locus_tag=RM615_RS06785;product=50S ribosomal protein L18;protein_id=WP_037574779.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 208050 208550 . + . ID=gene-RM615_RS06790;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=RM615_RS06790;old_locus_tag=RM615_06795 NZ_JAVRJW010000003.1 Protein Homology CDS 208050 208550 . + 0 ID=cds-WP_037574777.1;Parent=gene-RM615_RS06790;Dbxref=GenBank:WP_037574777.1;Name=WP_037574777.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=RM615_RS06790;product=30S ribosomal protein S5;protein_id=WP_037574777.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 208568 208747 . + . ID=gene-RM615_RS06795;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=RM615_RS06795;old_locus_tag=RM615_06800 NZ_JAVRJW010000003.1 Protein Homology CDS 208568 208747 . + 0 ID=cds-WP_037574776.1;Parent=gene-RM615_RS06795;Dbxref=GenBank:WP_037574776.1;Name=WP_037574776.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=RM615_RS06795;product=50S ribosomal protein L30;protein_id=WP_037574776.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 208764 209204 . + . ID=gene-RM615_RS06800;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=RM615_RS06800;old_locus_tag=RM615_06805 NZ_JAVRJW010000003.1 Protein Homology CDS 208764 209204 . + 0 ID=cds-WP_037574774.1;Parent=gene-RM615_RS06800;Dbxref=GenBank:WP_037574774.1;Name=WP_037574774.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=RM615_RS06800;product=50S ribosomal protein L15;protein_id=WP_037574774.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 209204 210496 . + . ID=gene-RM615_RS06805;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=RM615_RS06805;old_locus_tag=RM615_06810 NZ_JAVRJW010000003.1 Protein Homology CDS 209204 210496 . + 0 ID=cds-WP_037574771.1;Parent=gene-RM615_RS06805;Dbxref=GenBank:WP_037574771.1;Name=WP_037574771.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=RM615_RS06805;product=preprotein translocase subunit SecY;protein_id=WP_037574771.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 210514 211164 . + . ID=gene-RM615_RS06810;Name=RM615_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06810;old_locus_tag=RM615_06815 NZ_JAVRJW010000003.1 Protein Homology CDS 210514 211164 . + 0 ID=cds-WP_037574768.1;Parent=gene-RM615_RS06810;Dbxref=GenBank:WP_037574768.1;Name=WP_037574768.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448556.1;locus_tag=RM615_RS06810;product=adenylate kinase;protein_id=WP_037574768.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 211332 211550 . + . ID=gene-RM615_RS06815;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=RM615_RS06815;old_locus_tag=RM615_06820 NZ_JAVRJW010000003.1 Protein Homology CDS 211332 211550 . + 0 ID=cds-WP_001118443.1;Parent=gene-RM615_RS06815;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=RM615_RS06815;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 211583 211696 . + . ID=gene-RM615_RS06820;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=RM615_RS06820;old_locus_tag=RM615_06825 NZ_JAVRJW010000003.1 Protein Homology CDS 211583 211696 . + 0 ID=cds-WP_002509257.1;Parent=gene-RM615_RS06820;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=RM615_RS06820;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 211719 212084 . + . ID=gene-RM615_RS06825;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=RM615_RS06825;old_locus_tag=RM615_06830 NZ_JAVRJW010000003.1 Protein Homology CDS 211719 212084 . + 0 ID=cds-WP_037574765.1;Parent=gene-RM615_RS06825;Dbxref=GenBank:WP_037574765.1;Name=WP_037574765.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=RM615_RS06825;product=30S ribosomal protein S13;protein_id=WP_037574765.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 212109 212498 . + . ID=gene-RM615_RS06830;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=RM615_RS06830;old_locus_tag=RM615_06835 NZ_JAVRJW010000003.1 Protein Homology CDS 212109 212498 . + 0 ID=cds-WP_014613235.1;Parent=gene-RM615_RS06830;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=RM615_RS06830;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 212582 213526 . + . ID=gene-RM615_RS06835;Name=RM615_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06835;old_locus_tag=RM615_06840 NZ_JAVRJW010000003.1 Protein Homology CDS 212582 213526 . + 0 ID=cds-WP_037574762.1;Parent=gene-RM615_RS06835;Dbxref=GenBank:WP_037574762.1;Name=WP_037574762.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=RM615_RS06835;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_037574762.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 213543 213911 . + . ID=gene-RM615_RS06840;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=RM615_RS06840;old_locus_tag=RM615_06845 NZ_JAVRJW010000003.1 Protein Homology CDS 213543 213911 . + 0 ID=cds-WP_037574759.1;Parent=gene-RM615_RS06840;Dbxref=GenBank:WP_037574759.1;Name=WP_037574759.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=RM615_RS06840;product=50S ribosomal protein L17;protein_id=WP_037574759.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 214279 215082 . + . ID=gene-RM615_RS06845;Name=RM615_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06845;old_locus_tag=RM615_06850 NZ_JAVRJW010000003.1 Protein Homology CDS 214279 215082 . + 0 ID=cds-WP_037574756.1;Parent=gene-RM615_RS06845;Dbxref=GenBank:WP_037574756.1;Name=WP_037574756.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506987.1;locus_tag=RM615_RS06845;product=energy-coupling factor transporter ATPase;protein_id=WP_037574756.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 215079 215945 . + . ID=gene-RM615_RS06850;Name=RM615_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06850;old_locus_tag=RM615_06855 NZ_JAVRJW010000003.1 Protein Homology CDS 215079 215945 . + 0 ID=cds-WP_311541010.1;Parent=gene-RM615_RS06850;Dbxref=GenBank:WP_311541010.1;Name=WP_311541010.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167911.1;locus_tag=RM615_RS06850;product=energy-coupling factor transporter ATPase;protein_id=WP_311541010.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 215935 216738 . + . ID=gene-RM615_RS06855;Name=RM615_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06855;old_locus_tag=RM615_06860 NZ_JAVRJW010000003.1 Protein Homology CDS 215935 216738 . + 0 ID=cds-WP_037574751.1;Parent=gene-RM615_RS06855;Dbxref=GenBank:WP_037574751.1;Name=WP_037574751.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638503.1;locus_tag=RM615_RS06855;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_037574751.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 216753 217583 . + . ID=gene-RM615_RS06860;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=RM615_RS06860;old_locus_tag=RM615_06865 NZ_JAVRJW010000003.1 Protein Homology CDS 216753 217583 . + 0 ID=cds-WP_103158739.1;Parent=gene-RM615_RS06860;Dbxref=GenBank:WP_103158739.1;Name=WP_103158739.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506990.1;locus_tag=RM615_RS06860;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_103158739.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 217772 218209 . + . ID=gene-RM615_RS06865;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=RM615_RS06865;old_locus_tag=RM615_06870 NZ_JAVRJW010000003.1 Protein Homology CDS 217772 218209 . + 0 ID=cds-WP_037574745.1;Parent=gene-RM615_RS06865;Dbxref=GenBank:WP_037574745.1;Name=WP_037574745.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=RM615_RS06865;product=50S ribosomal protein L13;protein_id=WP_037574745.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 218229 218621 . + . ID=gene-RM615_RS06870;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=RM615_RS06870;old_locus_tag=RM615_06875 NZ_JAVRJW010000003.1 Protein Homology CDS 218229 218621 . + 0 ID=cds-WP_037542446.1;Parent=gene-RM615_RS06870;Dbxref=GenBank:WP_037542446.1;Name=WP_037542446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=RM615_RS06870;product=30S ribosomal protein S9;protein_id=WP_037542446.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 219267 220019 . + . ID=gene-RM615_RS06875;Name=RM615_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06875;old_locus_tag=RM615_06880 NZ_JAVRJW010000003.1 Protein Homology CDS 219267 220019 . + 0 ID=cds-WP_037574742.1;Parent=gene-RM615_RS06875;Dbxref=GenBank:WP_037574742.1;Name=WP_037574742.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=RM615_RS06875;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037574742.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 220260 220688 . + . ID=gene-RM615_RS06880;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=RM615_RS06880;old_locus_tag=RM615_06885 NZ_JAVRJW010000003.1 Protein Homology CDS 220260 220688 . + 0 ID=cds-WP_037574739.1;Parent=gene-RM615_RS06880;Dbxref=GenBank:WP_037574739.1;Name=WP_037574739.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=RM615_RS06880;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_037574739.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 220704 221219 . + . ID=gene-RM615_RS06885;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=RM615_RS06885;old_locus_tag=RM615_06890 NZ_JAVRJW010000003.1 Protein Homology CDS 220704 221219 . + 0 ID=cds-WP_037574736.1;Parent=gene-RM615_RS06885;Dbxref=GenBank:WP_037574736.1;Name=WP_037574736.1;Ontology_term=GO:0005990,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=RM615_RS06885;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_037574736.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 221321 222292 . + . ID=gene-RM615_RS06890;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=RM615_RS06890;old_locus_tag=RM615_06895 NZ_JAVRJW010000003.1 Protein Homology CDS 221321 222292 . + 0 ID=cds-WP_103158740.1;Parent=gene-RM615_RS06890;Dbxref=GenBank:WP_103158740.1;Name=WP_103158740.1;Ontology_term=GO:0005990,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=RM615_RS06890;product=tagatose-bisphosphate aldolase;protein_id=WP_103158740.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 222323 222637 . + . ID=gene-RM615_RS06895;Name=RM615_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06895;old_locus_tag=RM615_06900 NZ_JAVRJW010000003.1 Protein Homology CDS 222323 222637 . + 0 ID=cds-WP_037574730.1;Parent=gene-RM615_RS06895;Dbxref=GenBank:WP_037574730.1;Name=WP_037574730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=RM615_RS06895;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_037574730.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 222643 224391 . + . ID=gene-RM615_RS06900;Name=RM615_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06900;old_locus_tag=RM615_06905 NZ_JAVRJW010000003.1 Protein Homology CDS 222643 224391 . + 0 ID=cds-WP_311541011.1;Parent=gene-RM615_RS06900;Dbxref=GenBank:WP_311541011.1;Name=WP_311541011.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=RM615_RS06900;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_311541011.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 224407 225810 . + . ID=gene-RM615_RS06905;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=RM615_RS06905;old_locus_tag=RM615_06910 NZ_JAVRJW010000003.1 Protein Homology CDS 224407 225810 . + 0 ID=cds-WP_105996789.1;Parent=gene-RM615_RS06905;Dbxref=GenBank:WP_105996789.1;Name=WP_105996789.1;Ontology_term=GO:0005990,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275160.1;locus_tag=RM615_RS06905;product=6-phospho-beta-galactosidase;protein_id=WP_105996789.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 226076 227083 . + . ID=gene-RM615_RS06910;Name=RM615_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06910;old_locus_tag=RM615_06915 NZ_JAVRJW010000003.1 Protein Homology CDS 226076 227083 . + 0 ID=cds-WP_037574723.1;Parent=gene-RM615_RS06910;Dbxref=GenBank:WP_037574723.1;Name=WP_037574723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=RM615_RS06910;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_037574723.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 227161 228687 . + . ID=gene-RM615_RS06915;Name=RM615_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06915;old_locus_tag=RM615_06920 NZ_JAVRJW010000003.1 Protein Homology CDS 227161 228687 . + 0 ID=cds-WP_037574720.1;Parent=gene-RM615_RS06915;Dbxref=GenBank:WP_037574720.1;Name=WP_037574720.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900934.1;locus_tag=RM615_RS06915;product=BCCT family transporter;protein_id=WP_037574720.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 228951 229280 . + . ID=gene-RM615_RS06920;Name=RM615_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06920;old_locus_tag=RM615_06925 NZ_JAVRJW010000003.1 GeneMarkS-2+ CDS 228951 229280 . + 0 ID=cds-WP_103159485.1;Parent=gene-RM615_RS06920;Dbxref=GenBank:WP_103159485.1;Name=WP_103159485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS06920;product=hypothetical protein;protein_id=WP_103159485.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 229339 230490 . - . ID=gene-RM615_RS06925;Name=RM615_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06925;old_locus_tag=RM615_06930 NZ_JAVRJW010000003.1 Protein Homology CDS 229339 230490 . - 0 ID=cds-WP_107363500.1;Parent=gene-RM615_RS06925;Dbxref=GenBank:WP_107363500.1;Name=WP_107363500.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168328.1;locus_tag=RM615_RS06925;product=MFS transporter;protein_id=WP_107363500.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 230630 232576 . - . ID=gene-RM615_RS06930;Name=RM615_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06930;old_locus_tag=RM615_06935 NZ_JAVRJW010000003.1 Protein Homology CDS 230630 232576 . - 0 ID=cds-WP_107366924.1;Parent=gene-RM615_RS06930;Dbxref=GenBank:WP_107366924.1;Name=WP_107366924.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432557.1;locus_tag=RM615_RS06930;product=IucA/IucC family protein;protein_id=WP_107366924.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 232678 233844 . + . ID=gene-RM615_RS06935;Name=RM615_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06935;old_locus_tag=RM615_06940 NZ_JAVRJW010000003.1 Protein Homology CDS 232678 233844 . + 0 ID=cds-WP_037574708.1;Parent=gene-RM615_RS06935;Dbxref=GenBank:WP_037574708.1;Name=WP_037574708.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302621.1;locus_tag=RM615_RS06935;product=MFS transporter;protein_id=WP_037574708.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 233846 235609 . + . ID=gene-RM615_RS06940;Name=RM615_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06940;old_locus_tag=RM615_06945 NZ_JAVRJW010000003.1 Protein Homology CDS 233846 235609 . + 0 ID=cds-WP_311541013.1;Parent=gene-RM615_RS06940;Dbxref=GenBank:WP_311541013.1;Name=WP_311541013.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=RM615_RS06940;product=IucA/IucC family protein;protein_id=WP_311541013.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 235613 236683 . + . ID=gene-RM615_RS06945;Name=RM615_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06945;old_locus_tag=RM615_06950 NZ_JAVRJW010000003.1 Protein Homology CDS 235613 236683 . + 0 ID=cds-WP_037574703.1;Parent=gene-RM615_RS06945;Dbxref=GenBank:WP_037574703.1;Name=WP_037574703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=RM615_RS06945;product=alanine racemase;protein_id=WP_037574703.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 236757 237734 . + . ID=gene-RM615_RS06950;Name=RM615_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06950;old_locus_tag=RM615_06955 NZ_JAVRJW010000003.1 Protein Homology CDS 236757 237734 . + 0 ID=cds-WP_037575241.1;Parent=gene-RM615_RS06950;Dbxref=GenBank:WP_037575241.1;Name=WP_037575241.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722966.1;locus_tag=RM615_RS06950;product=ABC transporter substrate-binding protein;protein_id=WP_037575241.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 237780 238805 . + . ID=gene-RM615_RS06955;Name=RM615_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06955;old_locus_tag=RM615_06960 NZ_JAVRJW010000003.1 Protein Homology CDS 237780 238805 . + 0 ID=cds-WP_037574700.1;Parent=gene-RM615_RS06955;Dbxref=GenBank:WP_037574700.1;Name=WP_037574700.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364803.1;locus_tag=RM615_RS06955;product=FecCD family ABC transporter permease;protein_id=WP_037574700.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 238802 239764 . + . ID=gene-RM615_RS06960;Name=RM615_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06960;old_locus_tag=RM615_06965 NZ_JAVRJW010000003.1 Protein Homology CDS 238802 239764 . + 0 ID=cds-WP_105963147.1;Parent=gene-RM615_RS06960;Dbxref=GenBank:WP_105963147.1;Name=WP_105963147.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384837.1;locus_tag=RM615_RS06960;product=FecCD family ABC transporter permease;protein_id=WP_105963147.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 239866 240126 . - . ID=gene-RM615_RS06965;Name=RM615_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06965;old_locus_tag=RM615_06970 NZ_JAVRJW010000003.1 Protein Homology CDS 239866 240126 . - 0 ID=cds-WP_037574694.1;Parent=gene-RM615_RS06965;Dbxref=GenBank:WP_037574694.1;Name=WP_037574694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500896.1;locus_tag=RM615_RS06965;product=SunI/YnzG family protein;protein_id=WP_037574694.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 240314 240817 . + . ID=gene-RM615_RS06970;Name=RM615_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06970;old_locus_tag=RM615_06975 NZ_JAVRJW010000003.1 Protein Homology CDS 240314 240817 . + 0 ID=cds-WP_311541014.1;Parent=gene-RM615_RS06970;Dbxref=GenBank:WP_311541014.1;Name=WP_311541014.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482663.1;locus_tag=RM615_RS06970;product=metal-dependent hydrolase;protein_id=WP_311541014.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 240868 242058 . + . ID=gene-RM615_RS06975;Name=RM615_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06975;old_locus_tag=RM615_06980 NZ_JAVRJW010000003.1 Protein Homology CDS 240868 242058 . + 0 ID=cds-WP_105965537.1;Parent=gene-RM615_RS06975;Dbxref=GenBank:WP_105965537.1;Name=WP_105965537.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165085.1;locus_tag=RM615_RS06975;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_105965537.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 242069 242755 . + . ID=gene-RM615_RS06980;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=RM615_RS06980;old_locus_tag=RM615_06985 NZ_JAVRJW010000003.1 Protein Homology CDS 242069 242755 . + 0 ID=cds-WP_037574685.1;Parent=gene-RM615_RS06980;Dbxref=GenBank:WP_037574685.1;Name=WP_037574685.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=RM615_RS06980;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_037574685.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 242792 242965 . + . ID=gene-RM615_RS06985;Name=RM615_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06985;old_locus_tag=RM615_06990 NZ_JAVRJW010000003.1 Protein Homology CDS 242792 242965 . + 0 ID=cds-WP_229717292.1;Parent=gene-RM615_RS06985;Dbxref=GenBank:WP_229717292.1;Name=WP_229717292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168474.1;locus_tag=RM615_RS06985;product=hypothetical protein;protein_id=WP_229717292.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 243068 244402 . + . ID=gene-RM615_RS06990;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=RM615_RS06990;old_locus_tag=RM615_06995 NZ_JAVRJW010000003.1 Protein Homology CDS 243068 244402 . + 0 ID=cds-WP_103159481.1;Parent=gene-RM615_RS06990;Dbxref=GenBank:WP_103159481.1;Name=WP_103159481.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482666.1;locus_tag=RM615_RS06990;product=multidrug efflux MFS transporter SdrM;protein_id=WP_103159481.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 244443 244910 . + . ID=gene-RM615_RS06995;Name=RM615_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS06995;old_locus_tag=RM615_07000 NZ_JAVRJW010000003.1 Protein Homology CDS 244443 244910 . + 0 ID=cds-WP_119505261.1;Parent=gene-RM615_RS06995;Dbxref=GenBank:WP_119505261.1;Name=WP_119505261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426405.1;locus_tag=RM615_RS06995;product=SepA family multidrug efflux transporter;protein_id=WP_119505261.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 245256 246692 . + . ID=gene-RM615_RS07000;Name=RM615_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07000;old_locus_tag=RM615_07005 NZ_JAVRJW010000003.1 Protein Homology CDS 245256 246692 . + 0 ID=cds-WP_103159480.1;Parent=gene-RM615_RS07000;Dbxref=GenBank:WP_103159480.1;Name=WP_103159480.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384823.1;locus_tag=RM615_RS07000;product=MDR family MFS transporter;protein_id=WP_103159480.1;transl_table=11 NZ_JAVRJW010000003.1 RefSeq gene 246785 247849 . + . ID=gene-RM615_RS07005;Name=salA;gbkey=Gene;gene=salA;gene_biotype=protein_coding;locus_tag=RM615_RS07005;old_locus_tag=RM615_07010 NZ_JAVRJW010000003.1 Protein Homology CDS 246785 247849 . + 0 ID=cds-WP_037574671.1;Parent=gene-RM615_RS07005;Dbxref=GenBank:WP_037574671.1;Name=WP_037574671.1;gbkey=CDS;gene=salA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=RM615_RS07005;product=iron-sulfur carrier protein/transcriptional regulator SalA;protein_id=WP_037574671.1;transl_table=11 ##sequence-region NZ_JAVRJW010000004.1 1 211274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000004.1 RefSeq region 1 211274 . + . ID=NZ_JAVRJW010000004.1:1..211274;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000004.1 RefSeq gene 1 390 . - . ID=gene-RM615_RS07010;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM615_RS07010;old_locus_tag=RM615_07015;partial=true;start_range=.,1 NZ_JAVRJW010000004.1 Protein Homology CDS 1 390 . - 0 ID=cds-WP_311540737.1;Parent=gene-RM615_RS07010;Dbxref=GenBank:WP_311540737.1;Name=WP_311540737.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM615_RS07010;partial=true;product=deoxyribose-phosphate aldolase;protein_id=WP_311540737.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 403 1761 . - . ID=gene-RM615_RS07015;Name=RM615_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07015;old_locus_tag=RM615_07020 NZ_JAVRJW010000004.1 Protein Homology CDS 403 1761 . - 0 ID=cds-WP_105965543.1;Parent=gene-RM615_RS07015;Dbxref=GenBank:WP_105965543.1;Name=WP_105965543.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425879.1;locus_tag=RM615_RS07015;product=MFS transporter;protein_id=WP_105965543.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 1774 2481 . - . ID=gene-RM615_RS07020;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM615_RS07020;old_locus_tag=RM615_07025 NZ_JAVRJW010000004.1 Protein Homology CDS 1774 2481 . - 0 ID=cds-WP_037577358.1;Parent=gene-RM615_RS07020;Dbxref=GenBank:WP_037577358.1;Name=WP_037577358.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011248855.1;locus_tag=RM615_RS07020;product=purine-nucleoside phosphorylase;protein_id=WP_037577358.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 2727 3464 . - . ID=gene-RM615_RS07025;Name=RM615_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07025;old_locus_tag=RM615_07030 NZ_JAVRJW010000004.1 Protein Homology CDS 2727 3464 . - 0 ID=cds-WP_037577361.1;Parent=gene-RM615_RS07025;Dbxref=GenBank:WP_037577361.1;Name=WP_037577361.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804655.1;locus_tag=RM615_RS07025;product=GntR family transcriptional regulator;protein_id=WP_037577361.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 3705 4445 . - . ID=gene-RM615_RS07030;Name=RM615_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07030;old_locus_tag=RM615_07035 NZ_JAVRJW010000004.1 Protein Homology CDS 3705 4445 . - 0 ID=cds-WP_051605028.1;Parent=gene-RM615_RS07030;Dbxref=GenBank:WP_051605028.1;Name=WP_051605028.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM615_RS07030;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_051605028.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 4471 5574 . - . ID=gene-RM615_RS07035;Name=RM615_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07035;old_locus_tag=RM615_07040 NZ_JAVRJW010000004.1 Protein Homology CDS 4471 5574 . - 0 ID=cds-WP_037577364.1;Parent=gene-RM615_RS07035;Dbxref=GenBank:WP_037577364.1;Name=WP_037577364.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF016150.7;locus_tag=RM615_RS07035;product=DUF418 domain-containing protein;protein_id=WP_037577364.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 5924 6127 . - . ID=gene-RM615_RS07040;Name=RM615_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07040;old_locus_tag=RM615_07045 NZ_JAVRJW010000004.1 Protein Homology CDS 5924 6127 . - 0 ID=cds-WP_182470789.1;Parent=gene-RM615_RS07040;Dbxref=GenBank:WP_182470789.1;Name=WP_182470789.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167695.1;locus_tag=RM615_RS07040;product=helix-turn-helix domain-containing protein;protein_id=WP_182470789.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 6138 6605 . - . ID=gene-RM615_RS07045;Name=RM615_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07045;old_locus_tag=RM615_07050 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 6138 6605 . - 0 ID=cds-WP_311541017.1;Parent=gene-RM615_RS07045;Dbxref=GenBank:WP_311541017.1;Name=WP_311541017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07045;product=hypothetical protein;protein_id=WP_311541017.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 6754 7458 . - . ID=gene-RM615_RS07050;Name=RM615_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07050;old_locus_tag=RM615_07055 NZ_JAVRJW010000004.1 Protein Homology CDS 6754 7458 . - 0 ID=cds-WP_037577369.1;Parent=gene-RM615_RS07050;Dbxref=GenBank:WP_037577369.1;Name=WP_037577369.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=RM615_RS07050;product=GntR family transcriptional regulator;protein_id=WP_037577369.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 7614 9053 . + . ID=gene-RM615_RS07055;Name=RM615_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07055;old_locus_tag=RM615_07060 NZ_JAVRJW010000004.1 Protein Homology CDS 7614 9053 . + 0 ID=cds-WP_107366519.1;Parent=gene-RM615_RS07055;Dbxref=GenBank:WP_107366519.1;Name=WP_107366519.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163982.1;locus_tag=RM615_RS07055;product=6-phospho-beta-glucosidase;protein_id=WP_107366519.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 9155 9652 . - . ID=gene-RM615_RS07060;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM615_RS07060;old_locus_tag=RM615_07065 NZ_JAVRJW010000004.1 Protein Homology CDS 9155 9652 . - 0 ID=cds-WP_103159643.1;Parent=gene-RM615_RS07060;Dbxref=GenBank:WP_103159643.1;Name=WP_103159643.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM615_RS07060;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_103159643.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 9875 10741 . - . ID=gene-RM615_RS07065;Name=RM615_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07065;old_locus_tag=RM615_07070 NZ_JAVRJW010000004.1 Protein Homology CDS 9875 10741 . - 0 ID=cds-WP_037577375.1;Parent=gene-RM615_RS07065;Dbxref=GenBank:WP_037577375.1;Name=WP_037577375.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176733.1;locus_tag=RM615_RS07065;product=alpha/beta hydrolase;protein_id=WP_037577375.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 10812 11642 . - . ID=gene-RM615_RS07070;Name=RM615_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07070;old_locus_tag=RM615_07075 NZ_JAVRJW010000004.1 Protein Homology CDS 10812 11642 . - 0 ID=cds-WP_037577378.1;Parent=gene-RM615_RS07070;Dbxref=GenBank:WP_037577378.1;Name=WP_037577378.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM615_RS07070;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_037577378.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 12398 14029 . + . ID=gene-RM615_RS07075;Name=RM615_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07075;old_locus_tag=RM615_07080 NZ_JAVRJW010000004.1 Protein Homology CDS 12398 14029 . + 0 ID=cds-WP_105967353.1;Parent=gene-RM615_RS07075;Dbxref=GenBank:WP_105967353.1;Name=WP_105967353.1;Ontology_term=GO:0019865;gbkey=CDS;go_function=immunoglobulin binding|0019865||IEA;inference=COORDINATES: protein motif:HMM:NF014293.7;locus_tag=RM615_RS07075;product=B domain-containing protein;protein_id=WP_105967353.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 14135 15910 . - . ID=gene-RM615_RS07080;Name=RM615_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07080;old_locus_tag=RM615_07085 NZ_JAVRJW010000004.1 Protein Homology CDS 14135 15910 . - 0 ID=cds-WP_311541018.1;Parent=gene-RM615_RS07080;Dbxref=GenBank:WP_311541018.1;Name=WP_311541018.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=RM615_RS07080;product=oleate hydratase;protein_id=WP_311541018.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 16075 16659 . + . ID=gene-RM615_RS07085;Name=RM615_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07085;old_locus_tag=RM615_07090 NZ_JAVRJW010000004.1 Protein Homology CDS 16075 16659 . + 0 ID=cds-WP_107360679.1;Parent=gene-RM615_RS07085;Dbxref=GenBank:WP_107360679.1;Name=WP_107360679.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425866.1;locus_tag=RM615_RS07085;product=TetR/AcrR family transcriptional regulator;protein_id=WP_107360679.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 16726 19554 . - . ID=gene-RM615_RS07090;Name=RM615_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07090;old_locus_tag=RM615_07095 NZ_JAVRJW010000004.1 Protein Homology CDS 16726 19554 . - 0 ID=cds-WP_107364097.1;Parent=gene-RM615_RS07090;Dbxref=GenBank:WP_107364097.1;Name=WP_107364097.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=RM615_RS07090;product=YhgE/Pip domain-containing protein;protein_id=WP_107364097.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 19765 21810 . + . ID=gene-RM615_RS07095;Name=RM615_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07095;old_locus_tag=RM615_07100 NZ_JAVRJW010000004.1 Protein Homology CDS 19765 21810 . + 0 ID=cds-WP_107368056.1;Parent=gene-RM615_RS07095;Dbxref=GenBank:WP_107368056.1;Name=WP_107368056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011304033.1;locus_tag=RM615_RS07095;product=amidase domain-containing protein;protein_id=WP_107368056.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 21863 23551 . - . ID=gene-RM615_RS07100;Name=RM615_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07100;old_locus_tag=RM615_07105 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 21863 23551 . - 0 ID=cds-WP_311541019.1;Parent=gene-RM615_RS07100;Dbxref=GenBank:WP_311541019.1;Name=WP_311541019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07100;product=hypothetical protein;protein_id=WP_311541019.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 24246 24947 . + . ID=gene-RM615_RS07105;Name=RM615_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07105;old_locus_tag=RM615_07110 NZ_JAVRJW010000004.1 Protein Homology CDS 24246 24947 . + 0 ID=cds-WP_107399176.1;Parent=gene-RM615_RS07105;Dbxref=GenBank:WP_107399176.1;Name=WP_107399176.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769156.1;locus_tag=RM615_RS07105;product=exotoxin beta-grasp domain-containing protein;protein_id=WP_107399176.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 24967 26505 . + . ID=gene-RM615_RS07110;Name=RM615_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07110;old_locus_tag=RM615_07115 NZ_JAVRJW010000004.1 Protein Homology CDS 24967 26505 . + 0 ID=cds-WP_311540749.1;Parent=gene-RM615_RS07110;Dbxref=GenBank:WP_311540749.1;Name=WP_311540749.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208888.1;locus_tag=RM615_RS07110;product=YSIRK-type signal peptide-containing protein;protein_id=WP_311540749.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 26639 27598 . - . ID=gene-RM615_RS07115;Name=RM615_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07115;old_locus_tag=RM615_07120 NZ_JAVRJW010000004.1 Protein Homology CDS 26639 27598 . - 0 ID=cds-WP_107363795.1;Parent=gene-RM615_RS07115;Dbxref=GenBank:WP_107363795.1;Name=WP_107363795.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140911.1;locus_tag=RM615_RS07115;product=amidohydrolase family protein;protein_id=WP_107363795.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 27678 29060 . - . ID=gene-RM615_RS07120;Name=RM615_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07120;old_locus_tag=RM615_07125 NZ_JAVRJW010000004.1 Protein Homology CDS 27678 29060 . - 0 ID=cds-WP_169301502.1;Parent=gene-RM615_RS07120;Dbxref=GenBank:WP_169301502.1;Name=WP_169301502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467307.1;locus_tag=RM615_RS07120;product=MDR family MFS transporter;protein_id=WP_169301502.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 29263 29796 . - . ID=gene-RM615_RS07125;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=RM615_RS07125;old_locus_tag=RM615_07130 NZ_JAVRJW010000004.1 Protein Homology CDS 29263 29796 . - 0 ID=cds-WP_262621208.1;Parent=gene-RM615_RS07125;Dbxref=GenBank:WP_262621208.1;Name=WP_262621208.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460588.1;locus_tag=RM615_RS07125;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_262621208.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 29783 31645 . - . ID=gene-RM615_RS07130;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=RM615_RS07130;old_locus_tag=RM615_07135 NZ_JAVRJW010000004.1 Protein Homology CDS 29783 31645 . - 0 ID=cds-WP_311541020.1;Parent=gene-RM615_RS07130;Dbxref=GenBank:WP_311541020.1;Name=WP_311541020.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486864.1;locus_tag=RM615_RS07130;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_311541020.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 31901 32824 . - . ID=gene-RM615_RS07135;Name=RM615_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07135;old_locus_tag=RM615_07140 NZ_JAVRJW010000004.1 Protein Homology CDS 31901 32824 . - 0 ID=cds-WP_103159417.1;Parent=gene-RM615_RS07135;Dbxref=GenBank:WP_103159417.1;Name=WP_103159417.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302238.1;locus_tag=RM615_RS07135;product=lactate/malate family dehydrogenase;protein_id=WP_103159417.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 32987 33880 . - . ID=gene-RM615_RS07140;Name=RM615_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07140;old_locus_tag=RM615_07145 NZ_JAVRJW010000004.1 Protein Homology CDS 32987 33880 . - 0 ID=cds-WP_105965557.1;Parent=gene-RM615_RS07140;Dbxref=GenBank:WP_105965557.1;Name=WP_105965557.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901161.1;locus_tag=RM615_RS07140;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_105965557.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 34176 35327 . - . ID=gene-RM615_RS07145;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM615_RS07145;old_locus_tag=RM615_07150 NZ_JAVRJW010000004.1 Protein Homology CDS 34176 35327 . - 0 ID=cds-WP_105965558.1;Parent=gene-RM615_RS07145;Dbxref=GenBank:WP_105965558.1;Name=WP_105965558.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471824.1;locus_tag=RM615_RS07145;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_105965558.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 35357 35752 . - . ID=gene-RM615_RS07150;Name=RM615_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07150;old_locus_tag=RM615_07155 NZ_JAVRJW010000004.1 Protein Homology CDS 35357 35752 . - 0 ID=cds-WP_037576389.1;Parent=gene-RM615_RS07150;Dbxref=GenBank:WP_037576389.1;Name=WP_037576389.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479145.1;locus_tag=RM615_RS07150;product=PTS sugar transporter subunit IIA;protein_id=WP_037576389.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 35768 36667 . - . ID=gene-RM615_RS07155;Name=RM615_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07155;old_locus_tag=RM615_07160 NZ_JAVRJW010000004.1 Protein Homology CDS 35768 36667 . - 0 ID=cds-WP_037576391.1;Parent=gene-RM615_RS07155;Dbxref=GenBank:WP_037576391.1;Name=WP_037576391.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=RM615_RS07155;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_037576391.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 36654 37562 . - . ID=gene-RM615_RS07160;Name=RM615_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07160;old_locus_tag=RM615_07165 NZ_JAVRJW010000004.1 Protein Homology CDS 36654 37562 . - 0 ID=cds-WP_037576393.1;Parent=gene-RM615_RS07160;Dbxref=GenBank:WP_037576393.1;Name=WP_037576393.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=RM615_RS07160;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_037576393.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 37579 38058 . - . ID=gene-RM615_RS07165;Name=RM615_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07165;old_locus_tag=RM615_07170 NZ_JAVRJW010000004.1 Protein Homology CDS 37579 38058 . - 0 ID=cds-WP_037576396.1;Parent=gene-RM615_RS07165;Dbxref=GenBank:WP_037576396.1;Name=WP_037576396.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=RM615_RS07165;product=PTS sugar transporter subunit IIB;protein_id=WP_037576396.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 38076 39842 . - . ID=gene-RM615_RS07170;Name=RM615_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07170;old_locus_tag=RM615_07175 NZ_JAVRJW010000004.1 Protein Homology CDS 38076 39842 . - 0 ID=cds-WP_037576399.1;Parent=gene-RM615_RS07170;Dbxref=GenBank:WP_037576399.1;Name=WP_037576399.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425911.1;locus_tag=RM615_RS07170;product=glycoside hydrolase family 35 protein;protein_id=WP_037576399.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 39859 40803 . - . ID=gene-RM615_RS07175;Name=RM615_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07175;old_locus_tag=RM615_07180 NZ_JAVRJW010000004.1 Protein Homology CDS 39859 40803 . - 0 ID=cds-WP_105963048.1;Parent=gene-RM615_RS07175;Dbxref=GenBank:WP_105963048.1;Name=WP_105963048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017001107.1;locus_tag=RM615_RS07175;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_105963048.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 40898 42016 . - . ID=gene-RM615_RS07180;Name=RM615_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07180;old_locus_tag=RM615_07185 NZ_JAVRJW010000004.1 Protein Homology CDS 40898 42016 . - 0 ID=cds-WP_037576404.1;Parent=gene-RM615_RS07180;Dbxref=GenBank:WP_037576404.1;Name=WP_037576404.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460940.1;locus_tag=RM615_RS07180;product=SIS domain-containing protein;protein_id=WP_037576404.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 42044 42757 . - . ID=gene-RM615_RS07185;Name=RM615_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07185;old_locus_tag=RM615_07190 NZ_JAVRJW010000004.1 Protein Homology CDS 42044 42757 . - 0 ID=cds-WP_037576407.1;Parent=gene-RM615_RS07185;Dbxref=GenBank:WP_037576407.1;Name=WP_037576407.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460941.1;locus_tag=RM615_RS07185;product=GntR family transcriptional regulator;protein_id=WP_037576407.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 43526 43684 . - . ID=gene-RM615_RS07190;Name=RM615_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07190;old_locus_tag=RM615_07195 NZ_JAVRJW010000004.1 Protein Homology CDS 43526 43684 . - 0 ID=cds-WP_084276082.1;Parent=gene-RM615_RS07190;Dbxref=GenBank:WP_084276082.1;Name=WP_084276082.1;Ontology_term=GO:0042742,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: protein motif:HMM:NF016486.7;locus_tag=RM615_RS07190;product=type A2 lanthipeptide;protein_id=WP_084276082.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 44262 44903 . - . ID=gene-RM615_RS07195;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=RM615_RS07195;old_locus_tag=RM615_07200 NZ_JAVRJW010000004.1 Protein Homology CDS 44262 44903 . - 0 ID=cds-WP_037576410.1;Parent=gene-RM615_RS07195;Dbxref=GenBank:WP_037576410.1;Name=WP_037576410.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=RM615_RS07195;product=pyroglutamyl-peptidase I;protein_id=WP_037576410.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 44919 45845 . - . ID=gene-RM615_RS07200;Name=RM615_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07200;old_locus_tag=RM615_07205 NZ_JAVRJW010000004.1 Protein Homology CDS 44919 45845 . - 0 ID=cds-WP_105963050.1;Parent=gene-RM615_RS07200;Dbxref=GenBank:WP_105963050.1;Name=WP_105963050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302429.1;locus_tag=RM615_RS07200;product=DUF979 domain-containing protein;protein_id=WP_105963050.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 45838 46533 . - . ID=gene-RM615_RS07205;Name=RM615_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07205;old_locus_tag=RM615_07210 NZ_JAVRJW010000004.1 Protein Homology CDS 45838 46533 . - 0 ID=cds-WP_107378396.1;Parent=gene-RM615_RS07205;Dbxref=GenBank:WP_107378396.1;Name=WP_107378396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468807.1;locus_tag=RM615_RS07205;product=DUF969 domain-containing protein;protein_id=WP_107378396.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 46751 47728 . + . ID=gene-RM615_RS07210;Name=RM615_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07210;old_locus_tag=RM615_07215 NZ_JAVRJW010000004.1 Protein Homology CDS 46751 47728 . + 0 ID=cds-WP_037576416.1;Parent=gene-RM615_RS07210;Dbxref=GenBank:WP_037576416.1;Name=WP_037576416.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447550.1;locus_tag=RM615_RS07210;product=tRNA dihydrouridine synthase;protein_id=WP_037576416.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 47878 48957 . - . ID=gene-RM615_RS07215;Name=RM615_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07215;old_locus_tag=RM615_07220 NZ_JAVRJW010000004.1 Protein Homology CDS 47878 48957 . - 0 ID=cds-WP_037576418.1;Parent=gene-RM615_RS07215;Dbxref=GenBank:WP_037576418.1;Name=WP_037576418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722996.1;locus_tag=RM615_RS07215;product=aldo/keto reductase;protein_id=WP_037576418.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 49152 49292 . + . ID=gene-RM615_RS07220;Name=RM615_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07220;old_locus_tag=RM615_07225 NZ_JAVRJW010000004.1 Protein Homology CDS 49152 49292 . + 0 ID=cds-WP_165806043.1;Parent=gene-RM615_RS07220;Dbxref=GenBank:WP_165806043.1;Name=WP_165806043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480129.1;locus_tag=RM615_RS07220;product=hypothetical protein;protein_id=WP_165806043.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 49595 49810 . + . ID=gene-RM615_RS07225;Name=RM615_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07225;old_locus_tag=RM615_07230 NZ_JAVRJW010000004.1 Protein Homology CDS 49595 49810 . + 0 ID=cds-WP_037576421.1;Parent=gene-RM615_RS07225;Dbxref=GenBank:WP_037576421.1;Name=WP_037576421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480131.1;locus_tag=RM615_RS07225;product=hypothetical protein;protein_id=WP_037576421.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 50546 51025 . - . ID=gene-RM615_RS07230;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=RM615_RS07230;old_locus_tag=RM615_07240 NZ_JAVRJW010000004.1 Protein Homology CDS 50546 51025 . - 0 ID=cds-WP_037575283.1;Parent=gene-RM615_RS07230;Dbxref=GenBank:WP_037575283.1;Name=WP_037575283.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=RM615_RS07230;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_037575283.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq pseudogene 51809 53080 . - . ID=gene-RM615_RS07235;Name=RM615_RS07235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS07235;old_locus_tag=RM615_07245;pseudo=true NZ_JAVRJW010000004.1 Protein Homology CDS 51809 53080 . - 0 ID=cds-RM615_RS07235;Parent=gene-RM615_RS07235;Note=frameshifted;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174746.1;locus_tag=RM615_RS07235;product=arsenic transporter;pseudo=true;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 53213 53995 . - . ID=gene-RM615_RS07240;Name=RM615_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07240;old_locus_tag=RM615_07250 NZ_JAVRJW010000004.1 Protein Homology CDS 53213 53995 . - 0 ID=cds-WP_105967344.1;Parent=gene-RM615_RS07240;Dbxref=GenBank:WP_105967344.1;Name=WP_105967344.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=RM615_RS07240;product=MBL fold metallo-hydrolase;protein_id=WP_105967344.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 54021 54797 . - . ID=gene-RM615_RS07245;Name=RM615_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07245;old_locus_tag=RM615_07255 NZ_JAVRJW010000004.1 Protein Homology CDS 54021 54797 . - 0 ID=cds-WP_103159116.1;Parent=gene-RM615_RS07245;Dbxref=GenBank:WP_103159116.1;Name=WP_103159116.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=RM615_RS07245;product=two-component system regulatory protein YycI;protein_id=WP_103159116.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 54794 56131 . - . ID=gene-RM615_RS07250;Name=RM615_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07250;old_locus_tag=RM615_07260 NZ_JAVRJW010000004.1 Protein Homology CDS 54794 56131 . - 0 ID=cds-WP_037575291.1;Parent=gene-RM615_RS07250;Dbxref=GenBank:WP_037575291.1;Name=WP_037575291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=RM615_RS07250;product=YycH family regulatory protein;protein_id=WP_037575291.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 56121 57953 . - . ID=gene-RM615_RS07255;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=RM615_RS07255;old_locus_tag=RM615_07265 NZ_JAVRJW010000004.1 Protein Homology CDS 56121 57953 . - 0 ID=cds-WP_037575294.1;Parent=gene-RM615_RS07255;Dbxref=GenBank:WP_037575294.1;Name=WP_037575294.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274376.1;locus_tag=RM615_RS07255;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_037575294.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 57969 58670 . - . ID=gene-RM615_RS07260;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=RM615_RS07260;old_locus_tag=RM615_07270 NZ_JAVRJW010000004.1 Protein Homology CDS 57969 58670 . - 0 ID=cds-WP_037575295.1;Parent=gene-RM615_RS07260;Dbxref=GenBank:WP_037575295.1;Name=WP_037575295.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=RM615_RS07260;product=response regulator YycF;protein_id=WP_037575295.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 58918 58991 . - . ID=gene-RM615_RS07265;Name=RM615_RS07265;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS07265;old_locus_tag=RM615_07275 NZ_JAVRJW010000004.1 tRNAscan-SE tRNA 58918 58991 . - . ID=rna-RM615_RS07265;Parent=gene-RM615_RS07265;anticodon=(pos:complement(58955..58957));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS07265;product=tRNA-Asp NZ_JAVRJW010000004.1 tRNAscan-SE exon 58918 58991 . - . ID=exon-RM615_RS07265-1;Parent=rna-RM615_RS07265;anticodon=(pos:complement(58955..58957));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS07265;product=tRNA-Asp NZ_JAVRJW010000004.1 RefSeq gene 58998 59072 . - . ID=gene-RM615_RS07270;Name=RM615_RS07270;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS07270;old_locus_tag=RM615_07280 NZ_JAVRJW010000004.1 tRNAscan-SE tRNA 58998 59072 . - . ID=rna-RM615_RS07270;Parent=gene-RM615_RS07270;anticodon=(pos:complement(59037..59039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS07270;product=tRNA-Glu NZ_JAVRJW010000004.1 tRNAscan-SE exon 58998 59072 . - . ID=exon-RM615_RS07270-1;Parent=rna-RM615_RS07270;anticodon=(pos:complement(59037..59039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS07270;product=tRNA-Glu NZ_JAVRJW010000004.1 RefSeq gene 59361 59645 . + . ID=gene-RM615_RS07275;Name=RM615_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07275;old_locus_tag=RM615_07285 NZ_JAVRJW010000004.1 Protein Homology CDS 59361 59645 . + 0 ID=cds-WP_051604985.1;Parent=gene-RM615_RS07275;Dbxref=GenBank:WP_051604985.1;Name=WP_051604985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506644.1;locus_tag=RM615_RS07275;product=YrhK family protein;protein_id=WP_051604985.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 59723 61009 . - . ID=gene-RM615_RS07280;Name=RM615_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07280;old_locus_tag=RM615_07290 NZ_JAVRJW010000004.1 Protein Homology CDS 59723 61009 . - 0 ID=cds-WP_037575297.1;Parent=gene-RM615_RS07280;Dbxref=GenBank:WP_037575297.1;Name=WP_037575297.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=RM615_RS07280;product=adenylosuccinate synthase;protein_id=WP_037575297.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 61300 62700 . - . ID=gene-RM615_RS07285;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM615_RS07285;old_locus_tag=RM615_07295 NZ_JAVRJW010000004.1 Protein Homology CDS 61300 62700 . - 0 ID=cds-WP_105966000.1;Parent=gene-RM615_RS07285;Dbxref=GenBank:WP_105966000.1;Name=WP_105966000.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=RM615_RS07285;product=replicative DNA helicase;protein_id=WP_105966000.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 62847 63293 . - . ID=gene-RM615_RS07290;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=RM615_RS07290;old_locus_tag=RM615_07300 NZ_JAVRJW010000004.1 Protein Homology CDS 62847 63293 . - 0 ID=cds-WP_103159119.1;Parent=gene-RM615_RS07290;Dbxref=GenBank:WP_103159119.1;Name=WP_103159119.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=RM615_RS07290;product=50S ribosomal protein L9;protein_id=WP_103159119.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 63290 65257 . - . ID=gene-RM615_RS07295;Name=RM615_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07295;old_locus_tag=RM615_07305 NZ_JAVRJW010000004.1 Protein Homology CDS 63290 65257 . - 0 ID=cds-WP_103159120.1;Parent=gene-RM615_RS07295;Dbxref=GenBank:WP_103159120.1;Name=WP_103159120.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=RM615_RS07295;product=DHH family phosphoesterase;protein_id=WP_103159120.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 65269 66174 . - . ID=gene-RM615_RS07300;Name=RM615_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07300;old_locus_tag=RM615_07310 NZ_JAVRJW010000004.1 Protein Homology CDS 65269 66174 . - 0 ID=cds-WP_037575303.1;Parent=gene-RM615_RS07300;Dbxref=GenBank:WP_037575303.1;Name=WP_037575303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=RM615_RS07300;product=DUF2232 domain-containing protein;protein_id=WP_037575303.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 66509 67474 . - . ID=gene-RM615_RS07305;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=RM615_RS07305;old_locus_tag=RM615_07315 NZ_JAVRJW010000004.1 Protein Homology CDS 66509 67474 . - 0 ID=cds-WP_103159121.1;Parent=gene-RM615_RS07305;Dbxref=GenBank:WP_103159121.1;Name=WP_103159121.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=RM615_RS07305;product=homoserine O-acetyltransferase MetX;protein_id=WP_103159121.1;transl_table=11 NZ_JAVRJW010000004.1 cmsearch riboswitch 67551 67652 . - . ID=id-NZ_JAVRJW010000004.1:67551..67652;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000004.1 RefSeq gene 67708 68034 . - . ID=gene-RM615_RS07310;Name=RM615_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07310;old_locus_tag=RM615_07320 NZ_JAVRJW010000004.1 Protein Homology CDS 67708 68034 . - 0 ID=cds-WP_103159122.1;Parent=gene-RM615_RS07310;Dbxref=GenBank:WP_103159122.1;Name=WP_103159122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723684.1;locus_tag=RM615_RS07310;product=branched-chain amino acid transport AzlD family protein;protein_id=WP_103159122.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 68031 68723 . - . ID=gene-RM615_RS07315;Name=RM615_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07315;old_locus_tag=RM615_07325 NZ_JAVRJW010000004.1 Protein Homology CDS 68031 68723 . - 0 ID=cds-WP_037575308.1;Parent=gene-RM615_RS07315;Dbxref=GenBank:WP_037575308.1;Name=WP_037575308.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499825.1;locus_tag=RM615_RS07315;product=AzlC family ABC transporter permease;protein_id=WP_037575308.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 68998 70278 . - . ID=gene-RM615_RS07320;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=RM615_RS07320;old_locus_tag=RM615_07330 NZ_JAVRJW010000004.1 Protein Homology CDS 68998 70278 . - 0 ID=cds-WP_103159123.1;Parent=gene-RM615_RS07320;Dbxref=GenBank:WP_103159123.1;Name=WP_103159123.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=RM615_RS07320;product=serine--tRNA ligase;protein_id=WP_103159123.1;transl_table=11 NZ_JAVRJW010000004.1 cmsearch binding_site 70333 70517 . - . ID=id-NZ_JAVRJW010000004.1:70333..70517;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000004.1 RefSeq gene 70583 72085 . - . ID=gene-RM615_RS07325;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=RM615_RS07325;old_locus_tag=RM615_07335 NZ_JAVRJW010000004.1 Protein Homology CDS 70583 72085 . - 0 ID=cds-WP_311541061.1;Parent=gene-RM615_RS07325;Dbxref=GenBank:WP_311541061.1;Name=WP_311541061.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454363.1;locus_tag=RM615_RS07325;product=histidine ammonia-lyase;protein_id=WP_311541061.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 72362 73174 . + . ID=gene-RM615_RS07330;Name=RM615_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07330;old_locus_tag=RM615_07340 NZ_JAVRJW010000004.1 Protein Homology CDS 72362 73174 . + 0 ID=cds-WP_107367128.1;Parent=gene-RM615_RS07330;Dbxref=GenBank:WP_107367128.1;Name=WP_107367128.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510617.1;locus_tag=RM615_RS07330;product=NAD(P)H-hydrate dehydratase;protein_id=WP_107367128.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 73226 75880 . - . ID=gene-RM615_RS07335;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=RM615_RS07335;old_locus_tag=RM615_07345 NZ_JAVRJW010000004.1 Protein Homology CDS 73226 75880 . - 0 ID=cds-WP_037575314.1;Parent=gene-RM615_RS07335;Dbxref=GenBank:WP_037575314.1;Name=WP_037575314.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498614.1;locus_tag=RM615_RS07335;product=DNA gyrase subunit A;protein_id=WP_037575314.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 75913 77844 . - . ID=gene-RM615_RS07340;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=RM615_RS07340;old_locus_tag=RM615_07350 NZ_JAVRJW010000004.1 Protein Homology CDS 75913 77844 . - 0 ID=cds-WP_375713004.1;Parent=gene-RM615_RS07340;Dbxref=GenBank:WP_375713004.1;Name=WP_375713004.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=RM615_RS07340;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_375713004.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 77857 78972 . - . ID=gene-RM615_RS07345;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=RM615_RS07345;old_locus_tag=RM615_07355 NZ_JAVRJW010000004.1 Protein Homology CDS 77857 78972 . - 0 ID=cds-WP_037575320.1;Parent=gene-RM615_RS07345;Dbxref=GenBank:WP_037575320.1;Name=WP_037575320.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=RM615_RS07345;product=DNA replication/repair protein RecF;protein_id=WP_037575320.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 78969 79190 . - . ID=gene-RM615_RS07350;Name=RM615_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07350;old_locus_tag=RM615_07360 NZ_JAVRJW010000004.1 Protein Homology CDS 78969 79190 . - 0 ID=cds-WP_037565318.1;Parent=gene-RM615_RS07350;Dbxref=GenBank:WP_037565318.1;Name=WP_037565318.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612664.1;locus_tag=RM615_RS07350;product=RNA-binding S4 domain-containing protein;protein_id=WP_037565318.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 79335 80033 . - . ID=gene-RM615_RS07355;Name=RM615_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07355;old_locus_tag=RM615_07365 NZ_JAVRJW010000004.1 Protein Homology CDS 79335 80033 . - 0 ID=cds-WP_311541023.1;Parent=gene-RM615_RS07355;Dbxref=GenBank:WP_311541023.1;Name=WP_311541023.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729834.1;locus_tag=RM615_RS07355;product=DsbA family protein;protein_id=WP_311541023.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 80170 81303 . - . ID=gene-RM615_RS07360;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=RM615_RS07360;old_locus_tag=RM615_07370 NZ_JAVRJW010000004.1 Protein Homology CDS 80170 81303 . - 0 ID=cds-WP_084276046.1;Parent=gene-RM615_RS07360;Dbxref=GenBank:WP_084276046.1;Name=WP_084276046.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=RM615_RS07360;product=DNA polymerase III subunit beta;protein_id=WP_084276046.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 81485 82825 . - . ID=gene-RM615_RS07365;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=RM615_RS07365;old_locus_tag=RM615_07375 NZ_JAVRJW010000004.1 Protein Homology CDS 81485 82825 . - 0 ID=cds-WP_037575324.1;Parent=gene-RM615_RS07365;Dbxref=GenBank:WP_037575324.1;Name=WP_037575324.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466368.1;locus_tag=RM615_RS07365;product=chromosomal replication initiator protein DnaA;protein_id=WP_037575324.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 83362 83499 . + . ID=gene-RM615_RS07370;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=RM615_RS07370;old_locus_tag=RM615_07380 NZ_JAVRJW010000004.1 Protein Homology CDS 83362 83499 . + 0 ID=cds-WP_000240855.1;Parent=gene-RM615_RS07370;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=RM615_RS07370;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 83722 84069 . + . ID=gene-RM615_RS07375;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=RM615_RS07375;old_locus_tag=RM615_07385 NZ_JAVRJW010000004.1 Protein Homology CDS 83722 84069 . + 0 ID=cds-WP_037575327.1;Parent=gene-RM615_RS07375;Dbxref=GenBank:WP_037575327.1;Name=WP_037575327.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=RM615_RS07375;product=ribonuclease P protein component;protein_id=WP_037575327.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 84255 85637 . + . ID=gene-RM615_RS07380;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=RM615_RS07380;old_locus_tag=RM615_07390 NZ_JAVRJW010000004.1 Protein Homology CDS 84255 85637 . + 0 ID=cds-WP_311541024.1;Parent=gene-RM615_RS07380;Dbxref=GenBank:WP_311541024.1;Name=WP_311541024.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=RM615_RS07380;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_311541024.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 85654 87528 . + . ID=gene-RM615_RS07385;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=RM615_RS07385;old_locus_tag=RM615_07395 NZ_JAVRJW010000004.1 Protein Homology CDS 85654 87528 . + 0 ID=cds-WP_037575332.1;Parent=gene-RM615_RS07385;Dbxref=GenBank:WP_037575332.1;Name=WP_037575332.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=RM615_RS07385;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_037575332.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 87529 88248 . + . ID=gene-RM615_RS07390;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=RM615_RS07390;old_locus_tag=RM615_07400 NZ_JAVRJW010000004.1 Protein Homology CDS 87529 88248 . + 0 ID=cds-WP_311541025.1;Parent=gene-RM615_RS07390;Dbxref=GenBank:WP_311541025.1;Name=WP_311541025.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=RM615_RS07390;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_311541025.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 88290 89150 . + . ID=gene-RM615_RS07395;Name=RM615_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07395;old_locus_tag=RM615_07405 NZ_JAVRJW010000004.1 Protein Homology CDS 88290 89150 . + 0 ID=cds-WP_311541026.1;Parent=gene-RM615_RS07395;Dbxref=GenBank:WP_311541026.1;Name=WP_311541026.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=RM615_RS07395;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_311541026.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 89264 89851 . - . ID=gene-RM615_RS07400;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=RM615_RS07400;old_locus_tag=RM615_07410 NZ_JAVRJW010000004.1 Protein Homology CDS 89264 89851 . - 0 ID=cds-WP_037575340.1;Parent=gene-RM615_RS07400;Dbxref=GenBank:WP_037575340.1;Name=WP_037575340.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=RM615_RS07400;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_037575340.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 89868 90485 . - . ID=gene-RM615_RS07405;Name=RM615_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07405;old_locus_tag=RM615_07415 NZ_JAVRJW010000004.1 Protein Homology CDS 89868 90485 . - 0 ID=cds-WP_311541027.1;Parent=gene-RM615_RS07405;Dbxref=GenBank:WP_311541027.1;Name=WP_311541027.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=RM615_RS07405;product=flavin reductase family protein;protein_id=WP_311541027.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 90505 91464 . - . ID=gene-RM615_RS07410;Name=mhqE;gbkey=Gene;gene=mhqE;gene_biotype=protein_coding;locus_tag=RM615_RS07410;old_locus_tag=RM615_07420 NZ_JAVRJW010000004.1 Protein Homology CDS 90505 91464 . - 0 ID=cds-WP_037575346.1;Parent=gene-RM615_RS07410;Dbxref=GenBank:WP_037575346.1;Name=WP_037575346.1;gbkey=CDS;gene=mhqE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425714.1;locus_tag=RM615_RS07410;product=ring-cleaving dioxygenase MhqE;protein_id=WP_037575346.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 91542 91970 . - . ID=gene-RM615_RS07415;Name=RM615_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07415;old_locus_tag=RM615_07425 NZ_JAVRJW010000004.1 Protein Homology CDS 91542 91970 . - 0 ID=cds-WP_311541028.1;Parent=gene-RM615_RS07415;Dbxref=GenBank:WP_311541028.1;Name=WP_311541028.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478630.1;locus_tag=RM615_RS07415;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_311541028.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 92241 93254 . + . ID=gene-RM615_RS07420;Name=RM615_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07420;old_locus_tag=RM615_07430 NZ_JAVRJW010000004.1 Protein Homology CDS 92241 93254 . + 0 ID=cds-WP_311541029.1;Parent=gene-RM615_RS07420;Dbxref=GenBank:WP_311541029.1;Name=WP_311541029.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461555.1;locus_tag=RM615_RS07420;product=M23 family metallopeptidase;protein_id=WP_311541029.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 93298 93831 . - . ID=gene-RM615_RS07425;Name=RM615_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07425;old_locus_tag=RM615_07435 NZ_JAVRJW010000004.1 Protein Homology CDS 93298 93831 . - 0 ID=cds-WP_268216838.1;Parent=gene-RM615_RS07425;Dbxref=GenBank:WP_268216838.1;Name=WP_268216838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425888.1;locus_tag=RM615_RS07425;product=DoxX family membrane protein;protein_id=WP_268216838.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 94070 94348 . + . ID=gene-RM615_RS07430;Name=RM615_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07430;old_locus_tag=RM615_07440 NZ_JAVRJW010000004.1 Protein Homology CDS 94070 94348 . + 0 ID=cds-WP_037575359.1;Parent=gene-RM615_RS07430;Dbxref=GenBank:WP_037575359.1;Name=WP_037575359.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425884.1;locus_tag=RM615_RS07430;product=GNAT family N-acetyltransferase;protein_id=WP_037575359.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 94372 95580 . + . ID=gene-RM615_RS07435;Name=RM615_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07435;old_locus_tag=RM615_07445 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 94372 95580 . + 0 ID=cds-WP_311541030.1;Parent=gene-RM615_RS07435;Dbxref=GenBank:WP_311541030.1;Name=WP_311541030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07435;product=hypothetical protein;protein_id=WP_311541030.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 95892 96806 . - . ID=gene-RM615_RS07440;Name=RM615_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07440;old_locus_tag=RM615_07450 NZ_JAVRJW010000004.1 Protein Homology CDS 95892 96806 . - 0 ID=cds-WP_311541031.1;Parent=gene-RM615_RS07440;Dbxref=GenBank:WP_311541031.1;Name=WP_311541031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220252.1;locus_tag=RM615_RS07440;product=DUF5996 family protein;protein_id=WP_311541031.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 96944 97459 . - . ID=gene-RM615_RS07445;Name=RM615_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07445;old_locus_tag=RM615_07455 NZ_JAVRJW010000004.1 Protein Homology CDS 96944 97459 . - 0 ID=cds-WP_311541032.1;Parent=gene-RM615_RS07445;Dbxref=GenBank:WP_311541032.1;Name=WP_311541032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479056.1;locus_tag=RM615_RS07445;product=YceI family protein;protein_id=WP_311541032.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq pseudogene 97838 99297 . + . ID=gene-RM615_RS07450;Name=RM615_RS07450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS07450;old_locus_tag=RM615_07460;pseudo=true NZ_JAVRJW010000004.1 Protein Homology CDS 97838 99297 . + 0 ID=cds-RM615_RS07450;Parent=gene-RM615_RS07450;Note=frameshifted;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999193.1;locus_tag=RM615_RS07450;product=carbon starvation CstA family protein;pseudo=true;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 99478 99930 . + . ID=gene-RM615_RS07455;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=RM615_RS07455;old_locus_tag=RM615_07465 NZ_JAVRJW010000004.1 Protein Homology CDS 99478 99930 . + 0 ID=cds-WP_037575371.1;Parent=gene-RM615_RS07455;Dbxref=GenBank:WP_037575371.1;Name=WP_037575371.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=RM615_RS07455;product=urease accessory protein UreE;protein_id=WP_037575371.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 99923 100612 . + . ID=gene-RM615_RS07460;Name=RM615_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07460;old_locus_tag=RM615_07470 NZ_JAVRJW010000004.1 Protein Homology CDS 99923 100612 . + 0 ID=cds-WP_037575373.1;Parent=gene-RM615_RS07460;Dbxref=GenBank:WP_037575373.1;Name=WP_037575373.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=RM615_RS07460;product=urease accessory protein UreF;protein_id=WP_037575373.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 100624 101235 . + . ID=gene-RM615_RS07465;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=RM615_RS07465;old_locus_tag=RM615_07475 NZ_JAVRJW010000004.1 Protein Homology CDS 100624 101235 . + 0 ID=cds-WP_037575375.1;Parent=gene-RM615_RS07465;Dbxref=GenBank:WP_037575375.1;Name=WP_037575375.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166031.1;locus_tag=RM615_RS07465;product=urease accessory protein UreG;protein_id=WP_037575375.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 101237 102070 . + . ID=gene-RM615_RS07470;Name=RM615_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07470;old_locus_tag=RM615_07480 NZ_JAVRJW010000004.1 Protein Homology CDS 101237 102070 . + 0 ID=cds-WP_103158633.1;Parent=gene-RM615_RS07470;Dbxref=GenBank:WP_103158633.1;Name=WP_103158633.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=RM615_RS07470;product=urease accessory protein UreD;protein_id=WP_103158633.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 102173 102790 . - . ID=gene-RM615_RS07475;Name=RM615_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07475;old_locus_tag=RM615_07485 NZ_JAVRJW010000004.1 Protein Homology CDS 102173 102790 . - 0 ID=cds-WP_182470799.1;Parent=gene-RM615_RS07475;Dbxref=GenBank:WP_182470799.1;Name=WP_182470799.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615895.1;locus_tag=RM615_RS07475;product=LysE/ArgO family amino acid transporter;protein_id=WP_182470799.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 102835 103068 . - . ID=gene-RM615_RS07480;Name=RM615_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07480;old_locus_tag=RM615_07490 NZ_JAVRJW010000004.1 Protein Homology CDS 102835 103068 . - 0 ID=cds-WP_311541033.1;Parent=gene-RM615_RS07480;Dbxref=GenBank:WP_311541033.1;Name=WP_311541033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024461.8;locus_tag=RM615_RS07480;product=DUF3923 family protein;protein_id=WP_311541033.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 103217 105463 . - . ID=gene-RM615_RS07485;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=RM615_RS07485;old_locus_tag=RM615_07495 NZ_JAVRJW010000004.1 Protein Homology CDS 103217 105463 . - 0 ID=cds-WP_107371911.1;Parent=gene-RM615_RS07485;Dbxref=GenBank:WP_107371911.1;Name=WP_107371911.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445124.1;locus_tag=RM615_RS07485;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_107371911.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 105457 107298 . - . ID=gene-RM615_RS07490;Name=RM615_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07490;old_locus_tag=RM615_07500 NZ_JAVRJW010000004.1 Protein Homology CDS 105457 107298 . - 0 ID=cds-WP_105967339.1;Parent=gene-RM615_RS07490;Dbxref=GenBank:WP_105967339.1;Name=WP_105967339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=RM615_RS07490;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_105967339.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 107252 108427 . - . ID=gene-RM615_RS07495;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=RM615_RS07495;old_locus_tag=RM615_07505 NZ_JAVRJW010000004.1 Protein Homology CDS 107252 108427 . - 0 ID=cds-WP_311541034.1;Parent=gene-RM615_RS07495;Dbxref=GenBank:WP_311541034.1;Name=WP_311541034.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425702.1;locus_tag=RM615_RS07495;product=cystathionine beta-lyase MetC;protein_id=WP_311541034.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 108424 109527 . - . ID=gene-RM615_RS07500;Name=RM615_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07500;old_locus_tag=RM615_07510 NZ_JAVRJW010000004.1 Protein Homology CDS 108424 109527 . - 0 ID=cds-WP_105965586.1;Parent=gene-RM615_RS07500;Dbxref=GenBank:WP_105965586.1;Name=WP_105965586.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723610.1;locus_tag=RM615_RS07500;product=PLP-dependent transferase;protein_id=WP_105965586.1;transl_table=11 NZ_JAVRJW010000004.1 cmsearch binding_site 109642 109939 . - . ID=id-NZ_JAVRJW010000004.1:109642..109939;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVRJW010000004.1 RefSeq gene 110126 110953 . + . ID=gene-RM615_RS07505;Name=RM615_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07505;old_locus_tag=RM615_07515 NZ_JAVRJW010000004.1 Protein Homology CDS 110126 110953 . + 0 ID=cds-WP_105963086.1;Parent=gene-RM615_RS07505;Dbxref=GenBank:WP_105963086.1;Name=WP_105963086.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480309.1;locus_tag=RM615_RS07505;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_105963086.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 110977 111867 . + . ID=gene-RM615_RS07510;Name=RM615_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07510;old_locus_tag=RM615_07520 NZ_JAVRJW010000004.1 Protein Homology CDS 110977 111867 . + 0 ID=cds-WP_037575395.1;Parent=gene-RM615_RS07510;Dbxref=GenBank:WP_037575395.1;Name=WP_037575395.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479237.1;locus_tag=RM615_RS07510;product=mechanosensitive ion channel family protein;protein_id=WP_037575395.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 111903 112109 . + . ID=gene-RM615_RS07515;Name=RM615_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07515;old_locus_tag=RM615_07525 NZ_JAVRJW010000004.1 Protein Homology CDS 111903 112109 . + 0 ID=cds-WP_037575399.1;Parent=gene-RM615_RS07515;Dbxref=GenBank:WP_037575399.1;Name=WP_037575399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383300.1;locus_tag=RM615_RS07515;product=DUF951 domain-containing protein;protein_id=WP_037575399.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 112116 113213 . + . ID=gene-RM615_RS07520;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=RM615_RS07520;old_locus_tag=RM615_07530 NZ_JAVRJW010000004.1 Protein Homology CDS 112116 113213 . + 0 ID=cds-WP_037575402.1;Parent=gene-RM615_RS07520;Dbxref=GenBank:WP_037575402.1;Name=WP_037575402.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=RM615_RS07520;product=redox-regulated ATPase YchF;protein_id=WP_037575402.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 113420 114055 . - . ID=gene-RM615_RS07525;Name=RM615_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07525;old_locus_tag=RM615_07535 NZ_JAVRJW010000004.1 Protein Homology CDS 113420 114055 . - 0 ID=cds-WP_105963088.1;Parent=gene-RM615_RS07525;Dbxref=GenBank:WP_105963088.1;Name=WP_105963088.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019244338.1;locus_tag=RM615_RS07525;product=NAD(P)-dependent oxidoreductase;protein_id=WP_105963088.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 114369 114665 . + . ID=gene-RM615_RS07530;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=RM615_RS07530;old_locus_tag=RM615_07540 NZ_JAVRJW010000004.1 Protein Homology CDS 114369 114665 . + 0 ID=cds-WP_037565086.1;Parent=gene-RM615_RS07530;Dbxref=GenBank:WP_037565086.1;Name=WP_037565086.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=RM615_RS07530;product=30S ribosomal protein S6;protein_id=WP_037565086.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 114689 115192 . + . ID=gene-RM615_RS07535;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM615_RS07535;old_locus_tag=RM615_07545 NZ_JAVRJW010000004.1 Protein Homology CDS 114689 115192 . + 0 ID=cds-WP_037575408.1;Parent=gene-RM615_RS07535;Dbxref=GenBank:WP_037575408.1;Name=WP_037575408.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=RM615_RS07535;product=single-stranded DNA-binding protein;protein_id=WP_037575408.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 115236 115478 . + . ID=gene-RM615_RS07540;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=RM615_RS07540;old_locus_tag=RM615_07550 NZ_JAVRJW010000004.1 Protein Homology CDS 115236 115478 . + 0 ID=cds-WP_037565082.1;Parent=gene-RM615_RS07540;Dbxref=GenBank:WP_037565082.1;Name=WP_037565082.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=RM615_RS07540;product=30S ribosomal protein S18;protein_id=WP_037565082.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 115729 116301 . + . ID=gene-RM615_RS07545;Name=RM615_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07545;old_locus_tag=RM615_07555 NZ_JAVRJW010000004.1 Protein Homology CDS 115729 116301 . + 0 ID=cds-WP_311541035.1;Parent=gene-RM615_RS07545;Dbxref=GenBank:WP_311541035.1;Name=WP_311541035.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM615_RS07545;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311541035.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 116392 116772 . - . ID=gene-RM615_RS07550;Name=RM615_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07550;old_locus_tag=RM615_07560 NZ_JAVRJW010000004.1 Protein Homology CDS 116392 116772 . - 0 ID=cds-WP_037575414.1;Parent=gene-RM615_RS07550;Dbxref=GenBank:WP_037575414.1;Name=WP_037575414.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=RM615_RS07550;product=iron chaperone;protein_id=WP_037575414.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 116934 117236 . + . ID=gene-RM615_RS07555;Name=RM615_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07555;old_locus_tag=RM615_07565 NZ_JAVRJW010000004.1 Protein Homology CDS 116934 117236 . + 0 ID=cds-WP_037575417.1;Parent=gene-RM615_RS07555;Dbxref=GenBank:WP_037575417.1;Name=WP_037575417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506400.1;locus_tag=RM615_RS07555;product=PadR family transcriptional regulator;protein_id=WP_037575417.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 117247 118404 . + . ID=gene-RM615_RS07560;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=RM615_RS07560;old_locus_tag=RM615_07570 NZ_JAVRJW010000004.1 Protein Homology CDS 117247 118404 . + 0 ID=cds-WP_107398960.1;Parent=gene-RM615_RS07560;Dbxref=GenBank:WP_107398960.1;Name=WP_107398960.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383282.1;locus_tag=RM615_RS07560;product=chromate efflux transporter;protein_id=WP_107398960.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 118524 119744 . + . ID=gene-RM615_RS07565;Name=RM615_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07565;old_locus_tag=RM615_07575 NZ_JAVRJW010000004.1 Protein Homology CDS 118524 119744 . + 0 ID=cds-WP_103158643.1;Parent=gene-RM615_RS07565;Dbxref=GenBank:WP_103158643.1;Name=WP_103158643.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176585.1;locus_tag=RM615_RS07565;product=glycerate kinase family protein;protein_id=WP_103158643.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 119734 121125 . + . ID=gene-RM615_RS07570;Name=RM615_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07570;old_locus_tag=RM615_07580 NZ_JAVRJW010000004.1 Protein Homology CDS 119734 121125 . + 0 ID=cds-WP_107398962.1;Parent=gene-RM615_RS07570;Dbxref=GenBank:WP_107398962.1;Name=WP_107398962.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381576.1;locus_tag=RM615_RS07570;product=SLC13 family permease;protein_id=WP_107398962.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 121135 121812 . + . ID=gene-RM615_RS07575;Name=RM615_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07575;old_locus_tag=RM615_07585 NZ_JAVRJW010000004.1 Protein Homology CDS 121135 121812 . + 0 ID=cds-WP_311541037.1;Parent=gene-RM615_RS07575;Dbxref=GenBank:WP_311541037.1;Name=WP_311541037.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511690.1;locus_tag=RM615_RS07575;product=response regulator transcription factor;protein_id=WP_311541037.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 121817 123187 . + . ID=gene-RM615_RS07580;Name=RM615_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07580;old_locus_tag=RM615_07590 NZ_JAVRJW010000004.1 Protein Homology CDS 121817 123187 . + 0 ID=cds-WP_103158645.1;Parent=gene-RM615_RS07580;Dbxref=GenBank:WP_103158645.1;Name=WP_103158645.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381579.1;locus_tag=RM615_RS07580;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_103158645.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 123171 123842 . + . ID=gene-RM615_RS07585;Name=RM615_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07585;old_locus_tag=RM615_07595 NZ_JAVRJW010000004.1 Protein Homology CDS 123171 123842 . + 0 ID=cds-WP_051604981.1;Parent=gene-RM615_RS07585;Dbxref=GenBank:WP_051604981.1;Name=WP_051604981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.7;locus_tag=RM615_RS07585;product=PepSY domain-containing protein;protein_id=WP_051604981.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 124003 124995 . + . ID=gene-RM615_RS07590;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=RM615_RS07590;old_locus_tag=RM615_07600 NZ_JAVRJW010000004.1 Protein Homology CDS 124003 124995 . + 0 ID=cds-WP_105967331.1;Parent=gene-RM615_RS07590;Dbxref=GenBank:WP_105967331.1;Name=WP_105967331.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=RM615_RS07590;product=biotin synthase BioB;protein_id=WP_105967331.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 125156 126106 . + . ID=gene-RM615_RS07595;Name=RM615_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07595;old_locus_tag=RM615_07605 NZ_JAVRJW010000004.1 Protein Homology CDS 125156 126106 . + 0 ID=cds-WP_103158647.1;Parent=gene-RM615_RS07595;Dbxref=GenBank:WP_103158647.1;Name=WP_103158647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=RM615_RS07595;product=DUF1002 domain-containing protein;protein_id=WP_103158647.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 126166 126639 . - . ID=gene-RM615_RS07600;Name=RM615_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07600;old_locus_tag=RM615_07610 NZ_JAVRJW010000004.1 Protein Homology CDS 126166 126639 . - 0 ID=cds-WP_311541038.1;Parent=gene-RM615_RS07600;Dbxref=GenBank:WP_311541038.1;Name=WP_311541038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723560.1;locus_tag=RM615_RS07600;product=QueT transporter family protein;protein_id=WP_311541038.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 126851 128374 . - . ID=gene-RM615_RS07605;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=RM615_RS07605;old_locus_tag=RM615_07615 NZ_JAVRJW010000004.1 Protein Homology CDS 126851 128374 . - 0 ID=cds-WP_311541039.1;Parent=gene-RM615_RS07605;Dbxref=GenBank:WP_311541039.1;Name=WP_311541039.1;Ontology_term=GO:0000302,GO:0050660,GO:0051287,GO:0102039;gbkey=CDS;gene=ahpF;go_function=flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA,NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930502.1;locus_tag=RM615_RS07605;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_311541039.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 128621 129190 . - . ID=gene-RM615_RS07610;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=RM615_RS07610;old_locus_tag=RM615_07620 NZ_JAVRJW010000004.1 Protein Homology CDS 128621 129190 . - 0 ID=cds-WP_037575442.1;Parent=gene-RM615_RS07610;Dbxref=GenBank:WP_037575442.1;Name=WP_037575442.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=RM615_RS07610;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_037575442.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 129562 130338 . - . ID=gene-RM615_RS07615;Name=RM615_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07615;old_locus_tag=RM615_07625 NZ_JAVRJW010000004.1 Protein Homology CDS 129562 130338 . - 0 ID=cds-WP_037575444.1;Parent=gene-RM615_RS07615;Dbxref=GenBank:WP_037575444.1;Name=WP_037575444.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472380.1;locus_tag=RM615_RS07615;product=2-keto-4-pentenoate hydratase;protein_id=WP_037575444.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 130482 131237 . + . ID=gene-RM615_RS07620;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=RM615_RS07620;old_locus_tag=RM615_07630 NZ_JAVRJW010000004.1 Protein Homology CDS 130482 131237 . + 0 ID=cds-WP_037575446.1;Parent=gene-RM615_RS07620;Dbxref=GenBank:WP_037575446.1;Name=WP_037575446.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303929.1;locus_tag=RM615_RS07620;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_037575446.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 131360 132751 . - . ID=gene-RM615_RS07625;Name=RM615_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07625;old_locus_tag=RM615_07635 NZ_JAVRJW010000004.1 Protein Homology CDS 131360 132751 . - 0 ID=cds-WP_103158651.1;Parent=gene-RM615_RS07625;Dbxref=GenBank:WP_103158651.1;Name=WP_103158651.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=RM615_RS07625;product=L-cystine transporter;protein_id=WP_103158651.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 132826 133935 . - . ID=gene-RM615_RS07630;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=RM615_RS07630;old_locus_tag=RM615_07640 NZ_JAVRJW010000004.1 Protein Homology CDS 132826 133935 . - 0 ID=cds-WP_311541040.1;Parent=gene-RM615_RS07630;Dbxref=GenBank:WP_311541040.1;Name=WP_311541040.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=RM615_RS07630;product=glycine oxidase ThiO;protein_id=WP_311541040.1;transl_table=11 NZ_JAVRJW010000004.1 cmsearch riboswitch 134041 134143 . - . ID=id-NZ_JAVRJW010000004.1:134041..134143;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000004.1 RefSeq gene 134165 134767 . - . ID=gene-RM615_RS07635;Name=RM615_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07635;old_locus_tag=RM615_07645 NZ_JAVRJW010000004.1 Protein Homology CDS 134165 134767 . - 0 ID=cds-WP_037575455.1;Parent=gene-RM615_RS07635;Dbxref=GenBank:WP_037575455.1;Name=WP_037575455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=RM615_RS07635;product=hypothetical protein;protein_id=WP_037575455.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 134880 135554 . - . ID=gene-RM615_RS07640;Name=RM615_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07640;old_locus_tag=RM615_07650 NZ_JAVRJW010000004.1 Protein Homology CDS 134880 135554 . - 0 ID=cds-WP_311541041.1;Parent=gene-RM615_RS07640;Dbxref=GenBank:WP_311541041.1;Name=WP_311541041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=RM615_RS07640;product=hypothetical protein;protein_id=WP_311541041.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 135801 136211 . - . ID=gene-RM615_RS07645;Name=RM615_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07645;old_locus_tag=RM615_07655 NZ_JAVRJW010000004.1 Protein Homology CDS 135801 136211 . - 0 ID=cds-WP_311541042.1;Parent=gene-RM615_RS07645;Dbxref=GenBank:WP_311541042.1;Name=WP_311541042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=RM615_RS07645;product=general stress protein;protein_id=WP_311541042.1;transl_table=11 NZ_JAVRJW010000004.1 cmsearch riboswitch 136455 136557 . + . ID=id-NZ_JAVRJW010000004.1:136455..136557;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00167,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000004.1 RefSeq gene 136804 137388 . + . ID=gene-RM615_RS07650;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=RM615_RS07650;old_locus_tag=RM615_07660 NZ_JAVRJW010000004.1 Protein Homology CDS 136804 137388 . + 0 ID=cds-WP_037575465.1;Parent=gene-RM615_RS07650;Dbxref=GenBank:WP_037575465.1;Name=WP_037575465.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480340.1;locus_tag=RM615_RS07650;product=xanthine phosphoribosyltransferase;protein_id=WP_037575465.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 137385 138653 . + . ID=gene-RM615_RS07655;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=RM615_RS07655;old_locus_tag=RM615_07665 NZ_JAVRJW010000004.1 Protein Homology CDS 137385 138653 . + 0 ID=cds-WP_037575467.1;Parent=gene-RM615_RS07655;Dbxref=GenBank:WP_037575467.1;Name=WP_037575467.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=RM615_RS07655;product=xanthine permease PbuX;protein_id=WP_037575467.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 138689 140155 . + . ID=gene-RM615_RS07660;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=RM615_RS07660;old_locus_tag=RM615_07670 NZ_JAVRJW010000004.1 Protein Homology CDS 138689 140155 . + 0 ID=cds-WP_037575470.1;Parent=gene-RM615_RS07660;Dbxref=GenBank:WP_037575470.1;Name=WP_037575470.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=RM615_RS07660;product=IMP dehydrogenase;protein_id=WP_037575470.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 140178 141719 . + . ID=gene-RM615_RS07665;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=RM615_RS07665;old_locus_tag=RM615_07675 NZ_JAVRJW010000004.1 Protein Homology CDS 140178 141719 . + 0 ID=cds-WP_311541043.1;Parent=gene-RM615_RS07665;Dbxref=GenBank:WP_311541043.1;Name=WP_311541043.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=RM615_RS07665;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_311541043.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 141802 142935 . - . ID=gene-RM615_RS07670;Name=RM615_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07670;old_locus_tag=RM615_07680 NZ_JAVRJW010000004.1 Protein Homology CDS 141802 142935 . - 0 ID=cds-WP_511567714.1;Parent=gene-RM615_RS07670;Dbxref=GenBank:WP_511567714.1;Name=WP_511567714.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462002.1;locus_tag=RM615_RS07670;product=site-specific integrase;protein_id=WP_511567714.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq pseudogene 142938 143165 . + . ID=gene-RM615_RS07675;Name=RM615_RS07675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS07675;old_locus_tag=RM615_07685;partial=true;pseudo=true;start_range=.,142938 NZ_JAVRJW010000004.1 Protein Homology CDS 142938 143165 . + 0 ID=cds-RM615_RS07675;Parent=gene-RM615_RS07675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804627.1;locus_tag=RM615_RS07675;partial=true;product=encapsidation protein CP3;pseudo=true;start_range=.,142938;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 143168 143512 . + . ID=gene-RM615_RS07680;Name=RM615_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07680;old_locus_tag=RM615_07690 NZ_JAVRJW010000004.1 Protein Homology CDS 143168 143512 . + 0 ID=cds-WP_105996866.1;Parent=gene-RM615_RS07680;Dbxref=GenBank:WP_105996866.1;Name=WP_105996866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358773.1;locus_tag=RM615_RS07680;product=pathogenicity island protein;protein_id=WP_105996866.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 143509 143979 . + . ID=gene-RM615_RS07685;Name=RM615_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07685;old_locus_tag=RM615_07695 NZ_JAVRJW010000004.1 Protein Homology CDS 143509 143979 . + 0 ID=cds-WP_105996865.1;Parent=gene-RM615_RS07685;Dbxref=GenBank:WP_105996865.1;Name=WP_105996865.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487953.1;locus_tag=RM615_RS07685;product=terminase small subunit;protein_id=WP_105996865.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 144108 144641 . + . ID=gene-RM615_RS07690;Name=RM615_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07690;old_locus_tag=RM615_07700 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 144108 144641 . + 0 ID=cds-WP_105996864.1;Parent=gene-RM615_RS07690;Dbxref=GenBank:WP_105996864.1;Name=WP_105996864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07690;product=hypothetical protein;protein_id=WP_105996864.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 144654 144851 . + . ID=gene-RM615_RS07695;Name=RM615_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07695;old_locus_tag=RM615_07705 NZ_JAVRJW010000004.1 Protein Homology CDS 144654 144851 . + 0 ID=cds-WP_050346245.1;Parent=gene-RM615_RS07695;Dbxref=GenBank:WP_050346245.1;Name=WP_050346245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614892.1;locus_tag=RM615_RS07695;product=hypothetical protein;protein_id=WP_050346245.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 145048 145749 . + . ID=gene-RM615_RS07700;Name=RM615_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07700;old_locus_tag=RM615_07710 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 145048 145749 . + 0 ID=cds-WP_311541045.1;Parent=gene-RM615_RS07700;Dbxref=GenBank:WP_311541045.1;Name=WP_311541045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07700;product=hypothetical protein;protein_id=WP_311541045.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 145946 146929 . - . ID=gene-RM615_RS07705;Name=RM615_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07705;old_locus_tag=RM615_07715 NZ_JAVRJW010000004.1 Protein Homology CDS 145946 146929 . - 0 ID=cds-WP_311541046.1;Parent=gene-RM615_RS07705;Dbxref=GenBank:WP_311541046.1;Name=WP_311541046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499273.1;locus_tag=RM615_RS07705;product=DUF3644 domain-containing protein;protein_id=WP_311541046.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 147159 147956 . + . ID=gene-RM615_RS07710;Name=RM615_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07710;old_locus_tag=RM615_07720 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 147159 147956 . + 0 ID=cds-WP_311541047.1;Parent=gene-RM615_RS07710;Dbxref=GenBank:WP_311541047.1;Name=WP_311541047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07710;product=hypothetical protein;protein_id=WP_311541047.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 149131 150105 . + . ID=gene-RM615_RS07715;Name=RM615_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07715;old_locus_tag=RM615_07725 NZ_JAVRJW010000004.1 Protein Homology CDS 149131 150105 . + 0 ID=cds-WP_105965613.1;Parent=gene-RM615_RS07715;Dbxref=GenBank:WP_105965613.1;Name=WP_105965613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656280.1;locus_tag=RM615_RS07715;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_105965613.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 150214 151176 . + . ID=gene-RM615_RS07720;Name=RM615_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07720;old_locus_tag=RM615_07730 NZ_JAVRJW010000004.1 Protein Homology CDS 150214 151176 . + 0 ID=cds-WP_037575479.1;Parent=gene-RM615_RS07720;Dbxref=GenBank:WP_037575479.1;Name=WP_037575479.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461419.1;locus_tag=RM615_RS07720;product=carbohydrate kinase family protein;protein_id=WP_037575479.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 151205 152623 . + . ID=gene-RM615_RS07725;Name=RM615_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07725;old_locus_tag=RM615_07735 NZ_JAVRJW010000004.1 Protein Homology CDS 151205 152623 . + 0 ID=cds-WP_105996858.1;Parent=gene-RM615_RS07725;Dbxref=GenBank:WP_105996858.1;Name=WP_105996858.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656283.1;locus_tag=RM615_RS07725;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_105996858.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 152677 152931 . - . ID=gene-RM615_RS07730;Name=RM615_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07730;old_locus_tag=RM615_07740 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 152677 152931 . - 0 ID=cds-WP_105965615.1;Parent=gene-RM615_RS07730;Dbxref=GenBank:WP_105965615.1;Name=WP_105965615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07730;product=hypothetical protein;protein_id=WP_105965615.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 153066 154409 . + . ID=gene-RM615_RS07735;Name=RM615_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07735;old_locus_tag=RM615_07745 NZ_JAVRJW010000004.1 Protein Homology CDS 153066 154409 . + 0 ID=cds-WP_311541048.1;Parent=gene-RM615_RS07735;Dbxref=GenBank:WP_311541048.1;Name=WP_311541048.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=RM615_RS07735;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_311541048.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 154443 154874 . + . ID=gene-RM615_RS07740;Name=RM615_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07740;old_locus_tag=RM615_07750 NZ_JAVRJW010000004.1 Protein Homology CDS 154443 154874 . + 0 ID=cds-WP_105963122.1;Parent=gene-RM615_RS07740;Dbxref=GenBank:WP_105963122.1;Name=WP_105963122.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425893.1;locus_tag=RM615_RS07740;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_105963122.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 155027 155347 . + . ID=gene-RM615_RS07745;Name=RM615_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07745;old_locus_tag=RM615_07755 NZ_JAVRJW010000004.1 Protein Homology CDS 155027 155347 . + 0 ID=cds-WP_311541049.1;Parent=gene-RM615_RS07745;Dbxref=GenBank:WP_311541049.1;Name=WP_311541049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498730.1;locus_tag=RM615_RS07745;product=antibiotic biosynthesis monooxygenase;protein_id=WP_311541049.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 155649 156446 . + . ID=gene-RM615_RS07750;Name=RM615_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07750;old_locus_tag=RM615_07760 NZ_JAVRJW010000004.1 Protein Homology CDS 155649 156446 . + 0 ID=cds-WP_105996857.1;Parent=gene-RM615_RS07750;Dbxref=GenBank:WP_105996857.1;Name=WP_105996857.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=RM615_RS07750;product=trypsin-like serine peptidase;protein_id=WP_105996857.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 157003 158631 . + . ID=gene-RM615_RS07755;Name=RM615_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07755;old_locus_tag=RM615_07765 NZ_JAVRJW010000004.1 Protein Homology CDS 157003 158631 . + 0 ID=cds-WP_311541050.1;Parent=gene-RM615_RS07755;Dbxref=GenBank:WP_311541050.1;Name=WP_311541050.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020344.7;locus_tag=RM615_RS07755;product=coagulase domain-containing protein;protein_id=WP_311541050.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 158675 159229 . - . ID=gene-RM615_RS07760;Name=RM615_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07760;old_locus_tag=RM615_07770 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 158675 159229 . - 0 ID=cds-WP_311541051.1;Parent=gene-RM615_RS07760;Dbxref=GenBank:WP_311541051.1;Name=WP_311541051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07760;product=hypothetical protein;protein_id=WP_311541051.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 159405 160088 . + . ID=gene-RM615_RS07765;Name=RM615_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07765;old_locus_tag=RM615_07775 NZ_JAVRJW010000004.1 Protein Homology CDS 159405 160088 . + 0 ID=cds-WP_037575495.1;Parent=gene-RM615_RS07765;Dbxref=GenBank:WP_037575495.1;Name=WP_037575495.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190073.1;locus_tag=RM615_RS07765;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_037575495.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 160106 160687 . - . ID=gene-RM615_RS07770;Name=RM615_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07770;old_locus_tag=RM615_07780 NZ_JAVRJW010000004.1 Protein Homology CDS 160106 160687 . - 0 ID=cds-WP_311541052.1;Parent=gene-RM615_RS07770;Dbxref=GenBank:WP_311541052.1;Name=WP_311541052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219731.1;locus_tag=RM615_RS07770;product=hypothetical protein;protein_id=WP_311541052.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 160939 161748 . + . ID=gene-RM615_RS07775;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=RM615_RS07775;old_locus_tag=RM615_07785 NZ_JAVRJW010000004.1 Protein Homology CDS 160939 161748 . + 0 ID=cds-WP_311541054.1;Parent=gene-RM615_RS07775;Dbxref=GenBank:WP_311541054.1;Name=WP_311541054.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166931.1;locus_tag=RM615_RS07775;product=histidine racemase CntK;protein_id=WP_311541054.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 161758 162585 . + . ID=gene-RM615_RS07780;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=RM615_RS07780;old_locus_tag=RM615_07790 NZ_JAVRJW010000004.1 Protein Homology CDS 161758 162585 . + 0 ID=cds-WP_311541055.1;Parent=gene-RM615_RS07780;Dbxref=GenBank:WP_311541055.1;Name=WP_311541055.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444886.1;locus_tag=RM615_RS07780;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_311541055.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 162582 163874 . + . ID=gene-RM615_RS07785;Name=RM615_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07785;old_locus_tag=RM615_07795 NZ_JAVRJW010000004.1 Protein Homology CDS 162582 163874 . + 0 ID=cds-WP_311541056.1;Parent=gene-RM615_RS07785;Dbxref=GenBank:WP_311541056.1;Name=WP_311541056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425639.1;locus_tag=RM615_RS07785;product=opine metallophore biosynthesis dehydrogenase;protein_id=WP_311541056.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 163904 165502 . + . ID=gene-RM615_RS07790;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=RM615_RS07790;old_locus_tag=RM615_07800 NZ_JAVRJW010000004.1 Protein Homology CDS 163904 165502 . + 0 ID=cds-WP_107375774.1;Parent=gene-RM615_RS07790;Dbxref=GenBank:WP_107375774.1;Name=WP_107375774.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=RM615_RS07790;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_107375774.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 165515 166447 . + . ID=gene-RM615_RS07795;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=RM615_RS07795;old_locus_tag=RM615_07805 NZ_JAVRJW010000004.1 Protein Homology CDS 165515 166447 . + 0 ID=cds-WP_107358795.1;Parent=gene-RM615_RS07795;Dbxref=GenBank:WP_107358795.1;Name=WP_107358795.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425637.1;locus_tag=RM615_RS07795;product=nickel/cobalt ABC transporter permease;protein_id=WP_107358795.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 166448 167314 . + . ID=gene-RM615_RS07800;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=RM615_RS07800;old_locus_tag=RM615_07810 NZ_JAVRJW010000004.1 Protein Homology CDS 166448 167314 . + 0 ID=cds-WP_107358796.1;Parent=gene-RM615_RS07800;Dbxref=GenBank:WP_107358796.1;Name=WP_107358796.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444882.1;locus_tag=RM615_RS07800;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_107358796.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 167311 168129 . + . ID=gene-RM615_RS07805;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=RM615_RS07805;old_locus_tag=RM615_07815 NZ_JAVRJW010000004.1 Protein Homology CDS 167311 168129 . + 0 ID=cds-WP_311541057.1;Parent=gene-RM615_RS07805;Dbxref=GenBank:WP_311541057.1;Name=WP_311541057.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=RM615_RS07805;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_311541057.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 168123 168860 . + . ID=gene-RM615_RS07810;Name=RM615_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07810;old_locus_tag=RM615_07820 NZ_JAVRJW010000004.1 Protein Homology CDS 168123 168860 . + 0 ID=cds-WP_103158718.1;Parent=gene-RM615_RS07810;Dbxref=GenBank:WP_103158718.1;Name=WP_103158718.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=RM615_RS07810;product=ABC transporter ATP-binding protein;protein_id=WP_103158718.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 168875 170086 . + . ID=gene-RM615_RS07815;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=RM615_RS07815;old_locus_tag=RM615_07825 NZ_JAVRJW010000004.1 Protein Homology CDS 168875 170086 . + 0 ID=cds-WP_037575515.1;Parent=gene-RM615_RS07815;Dbxref=GenBank:WP_037575515.1;Name=WP_037575515.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005827923.1;locus_tag=RM615_RS07815;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_037575515.1;transl_table=11 NZ_JAVRJW010000004.1 cmsearch riboswitch 170771 170875 . + . ID=id-NZ_JAVRJW010000004.1:170771..170875;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00442,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000004.1 RefSeq gene 170925 171245 . + . ID=gene-RM615_RS07820;Name=RM615_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07820;old_locus_tag=RM615_07830 NZ_JAVRJW010000004.1 Protein Homology CDS 170925 171245 . + 0 ID=cds-WP_037575517.1;Parent=gene-RM615_RS07820;Dbxref=GenBank:WP_037575517.1;Name=WP_037575517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006903.1;locus_tag=RM615_RS07820;product=DMT family transporter;protein_id=WP_037575517.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 171246 171560 . + . ID=gene-RM615_RS07825;Name=RM615_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07825;old_locus_tag=RM615_07835 NZ_JAVRJW010000004.1 Protein Homology CDS 171246 171560 . + 0 ID=cds-WP_037575519.1;Parent=gene-RM615_RS07825;Dbxref=GenBank:WP_037575519.1;Name=WP_037575519.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912747.1;locus_tag=RM615_RS07825;product=DMT family transporter;protein_id=WP_037575519.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 171588 171776 . + . ID=gene-RM615_RS07830;Name=RM615_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07830;old_locus_tag=RM615_07840 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 171588 171776 . + 0 ID=cds-WP_037575523.1;Parent=gene-RM615_RS07830;Dbxref=GenBank:WP_037575523.1;Name=WP_037575523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07830;product=hypothetical protein;protein_id=WP_037575523.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 171854 172405 . + . ID=gene-RM615_RS07835;Name=RM615_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07835;old_locus_tag=RM615_07845 NZ_JAVRJW010000004.1 Protein Homology CDS 171854 172405 . + 0 ID=cds-WP_037575601.1;Parent=gene-RM615_RS07835;Dbxref=GenBank:WP_037575601.1;Name=WP_037575601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723305.1;locus_tag=RM615_RS07835;product=hypothetical protein;protein_id=WP_037575601.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 172429 173301 . - . ID=gene-RM615_RS07840;Name=RM615_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07840;old_locus_tag=RM615_07850 NZ_JAVRJW010000004.1 Protein Homology CDS 172429 173301 . - 0 ID=cds-WP_103158716.1;Parent=gene-RM615_RS07840;Dbxref=GenBank:WP_103158716.1;Name=WP_103158716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425627.1;locus_tag=RM615_RS07840;product=oxidoreductase;protein_id=WP_103158716.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 173368 174180 . + . ID=gene-RM615_RS07845;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=RM615_RS07845;old_locus_tag=RM615_07855 NZ_JAVRJW010000004.1 Protein Homology CDS 173368 174180 . + 0 ID=cds-WP_103158715.1;Parent=gene-RM615_RS07845;Dbxref=GenBank:WP_103158715.1;Name=WP_103158715.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431941.1;locus_tag=RM615_RS07845;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_103158715.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 174173 175030 . + . ID=gene-RM615_RS07850;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=RM615_RS07850;old_locus_tag=RM615_07860 NZ_JAVRJW010000004.1 Protein Homology CDS 174173 175030 . + 0 ID=cds-WP_103158714.1;Parent=gene-RM615_RS07850;Dbxref=GenBank:WP_103158714.1;Name=WP_103158714.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425625.1;locus_tag=RM615_RS07850;product=pantoate--beta-alanine ligase;protein_id=WP_103158714.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 175027 175410 . + . ID=gene-RM615_RS07855;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=RM615_RS07855;old_locus_tag=RM615_07865 NZ_JAVRJW010000004.1 Protein Homology CDS 175027 175410 . + 0 ID=cds-WP_037575534.1;Parent=gene-RM615_RS07855;Dbxref=GenBank:WP_037575534.1;Name=WP_037575534.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=RM615_RS07855;product=aspartate 1-decarboxylase;protein_id=WP_037575534.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 175815 176153 . + . ID=gene-RM615_RS11175;Name=RM615_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11175 NZ_JAVRJW010000004.1 Protein Homology CDS 175815 176153 . + 0 ID=cds-WP_338323073.1;Parent=gene-RM615_RS11175;Dbxref=GenBank:WP_338323073.1;Name=WP_338323073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM615_RS11175;product=DUF5079 family protein;protein_id=WP_338323073.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 176468 177319 . - . ID=gene-RM615_RS07860;Name=RM615_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07860;old_locus_tag=RM615_07870 NZ_JAVRJW010000004.1 Protein Homology CDS 176468 177319 . - 0 ID=cds-WP_311541058.1;Parent=gene-RM615_RS07860;Dbxref=GenBank:WP_311541058.1;Name=WP_311541058.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444161.1;locus_tag=RM615_RS07860;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_311541058.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 177532 180156 . + . ID=gene-RM615_RS07865;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=RM615_RS07865;old_locus_tag=RM615_07875 NZ_JAVRJW010000004.1 Protein Homology CDS 177532 180156 . + 0 ID=cds-WP_103158712.1;Parent=gene-RM615_RS07865;Dbxref=GenBank:WP_103158712.1;Name=WP_103158712.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425622.1;locus_tag=RM615_RS07865;product=pyruvate%2C phosphate dikinase;protein_id=WP_103158712.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 180158 180964 . + . ID=gene-RM615_RS07870;Name=RM615_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07870;old_locus_tag=RM615_07880 NZ_JAVRJW010000004.1 Protein Homology CDS 180158 180964 . + 0 ID=cds-WP_103158727.1;Parent=gene-RM615_RS07870;Dbxref=GenBank:WP_103158727.1;Name=WP_103158727.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728561.1;locus_tag=RM615_RS07870;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_103158727.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 181176 182504 . + . ID=gene-RM615_RS07875;Name=RM615_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07875;old_locus_tag=RM615_07885 NZ_JAVRJW010000004.1 Protein Homology CDS 181176 182504 . + 0 ID=cds-WP_105965621.1;Parent=gene-RM615_RS07875;Dbxref=GenBank:WP_105965621.1;Name=WP_105965621.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898389.1;locus_tag=RM615_RS07875;product=sodium-dependent transporter;protein_id=WP_105965621.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 182596 183933 . - . ID=gene-RM615_RS07880;Name=RM615_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07880;old_locus_tag=RM615_07890 NZ_JAVRJW010000004.1 Protein Homology CDS 182596 183933 . - 0 ID=cds-WP_311541060.1;Parent=gene-RM615_RS07880;Dbxref=GenBank:WP_311541060.1;Name=WP_311541060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425618.1;locus_tag=RM615_RS07880;product=carboxylesterase family protein;protein_id=WP_311541060.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 183945 184367 . - . ID=gene-RM615_RS07885;Name=RM615_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07885;old_locus_tag=RM615_07895 NZ_JAVRJW010000004.1 Protein Homology CDS 183945 184367 . - 0 ID=cds-WP_103158709.1;Parent=gene-RM615_RS07885;Dbxref=GenBank:WP_103158709.1;Name=WP_103158709.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013084158.1;locus_tag=RM615_RS07885;product=GNAT family N-acetyltransferase;protein_id=WP_103158709.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 184521 185432 . + . ID=gene-RM615_RS07890;Name=RM615_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07890;old_locus_tag=RM615_07900 NZ_JAVRJW010000004.1 Protein Homology CDS 184521 185432 . + 0 ID=cds-WP_107360661.1;Parent=gene-RM615_RS07890;Dbxref=GenBank:WP_107360661.1;Name=WP_107360661.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614845.1;locus_tag=RM615_RS07890;product=PLP-dependent cysteine synthase family protein;protein_id=WP_107360661.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 185425 186564 . + . ID=gene-RM615_RS07895;Name=RM615_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07895;old_locus_tag=RM615_07905 NZ_JAVRJW010000004.1 Protein Homology CDS 185425 186564 . + 0 ID=cds-WP_107360662.1;Parent=gene-RM615_RS07895;Dbxref=GenBank:WP_107360662.1;Name=WP_107360662.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482209.1;locus_tag=RM615_RS07895;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_107360662.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 186860 187861 . + . ID=gene-RM615_RS07900;Name=RM615_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07900;old_locus_tag=RM615_07910 NZ_JAVRJW010000004.1 Protein Homology CDS 186860 187861 . + 0 ID=cds-WP_107387852.1;Parent=gene-RM615_RS07900;Dbxref=GenBank:WP_107387852.1;Name=WP_107387852.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170274.1;locus_tag=RM615_RS07900;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_107387852.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 187923 189170 . - . ID=gene-RM615_RS07905;Name=RM615_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07905;old_locus_tag=RM615_07915 NZ_JAVRJW010000004.1 Protein Homology CDS 187923 189170 . - 0 ID=cds-WP_157946139.1;Parent=gene-RM615_RS07905;Dbxref=GenBank:WP_157946139.1;Name=WP_157946139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM615_RS07905;product=YhgE/Pip domain-containing protein;protein_id=WP_157946139.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 189315 189926 . + . ID=gene-RM615_RS07910;Name=RM615_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07910;old_locus_tag=RM615_07920 NZ_JAVRJW010000004.1 Protein Homology CDS 189315 189926 . + 0 ID=cds-WP_103158705.1;Parent=gene-RM615_RS07910;Dbxref=GenBank:WP_103158705.1;Name=WP_103158705.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425612.1;locus_tag=RM615_RS07910;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103158705.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 190162 190434 . - . ID=gene-RM615_RS07915;Name=RM615_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07915;old_locus_tag=RM615_07925 NZ_JAVRJW010000004.1 Protein Homology CDS 190162 190434 . - 0 ID=cds-WP_037575566.1;Parent=gene-RM615_RS07915;Dbxref=GenBank:WP_037575566.1;Name=WP_037575566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425611.1;locus_tag=RM615_RS07915;product=hypothetical protein;protein_id=WP_037575566.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 190660 191169 . + . ID=gene-RM615_RS07920;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM615_RS07920;old_locus_tag=RM615_07930 NZ_JAVRJW010000004.1 Protein Homology CDS 190660 191169 . + 0 ID=cds-WP_037575569.1;Parent=gene-RM615_RS07920;Dbxref=GenBank:WP_037575569.1;Name=WP_037575569.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=RM615_RS07920;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_037575569.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 191234 193495 . - . ID=gene-RM615_RS07925;Name=RM615_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07925;old_locus_tag=RM615_07935 NZ_JAVRJW010000004.1 Protein Homology CDS 191234 193495 . - 0 ID=cds-WP_311540390.1;Parent=gene-RM615_RS07925;Dbxref=GenBank:WP_311540390.1;Name=WP_311540390.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466595.1;locus_tag=RM615_RS07925;product=ATP-binding cassette domain-containing protein;protein_id=WP_311540390.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 193488 194318 . - . ID=gene-RM615_RS07930;Name=RM615_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07930;old_locus_tag=RM615_07940 NZ_JAVRJW010000004.1 Protein Homology CDS 193488 194318 . - 0 ID=cds-WP_105965630.1;Parent=gene-RM615_RS07930;Dbxref=GenBank:WP_105965630.1;Name=WP_105965630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=RM615_RS07930;product=YibE/F family protein;protein_id=WP_105965630.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 194315 195427 . - . ID=gene-RM615_RS07935;Name=RM615_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07935;old_locus_tag=RM615_07945 NZ_JAVRJW010000004.1 Protein Homology CDS 194315 195427 . - 0 ID=cds-WP_103158702.1;Parent=gene-RM615_RS07935;Dbxref=GenBank:WP_103158702.1;Name=WP_103158702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469651.1;locus_tag=RM615_RS07935;product=YibE/F family protein;protein_id=WP_103158702.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 195440 196315 . - . ID=gene-RM615_RS07940;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=RM615_RS07940;old_locus_tag=RM615_07950 NZ_JAVRJW010000004.1 Protein Homology CDS 195440 196315 . - 0 ID=cds-WP_103158701.1;Parent=gene-RM615_RS07940;Dbxref=GenBank:WP_103158701.1;Name=WP_103158701.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=RM615_RS07940;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_103158701.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 196439 200944 . + . ID=gene-RM615_RS07945;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=RM615_RS07945;old_locus_tag=RM615_07955 NZ_JAVRJW010000004.1 Protein Homology CDS 196439 200944 . + 0 ID=cds-WP_103158700.1;Parent=gene-RM615_RS07945;Dbxref=GenBank:WP_103158700.1;Name=WP_103158700.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=RM615_RS07945;product=glutamate synthase large subunit;protein_id=WP_103158700.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 200958 202415 . + . ID=gene-RM615_RS07950;Name=RM615_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07950;old_locus_tag=RM615_07960 NZ_JAVRJW010000004.1 Protein Homology CDS 200958 202415 . + 0 ID=cds-WP_103158699.1;Parent=gene-RM615_RS07950;Dbxref=GenBank:WP_103158699.1;Name=WP_103158699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445259.1;locus_tag=RM615_RS07950;product=glutamate synthase subunit beta;protein_id=WP_103158699.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 202482 202574 . + . ID=gene-RM615_RS07955;Name=RM615_RS07955;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS07955;old_locus_tag=RM615_07965 NZ_JAVRJW010000004.1 tRNAscan-SE tRNA 202482 202574 . + . ID=rna-RM615_RS07955;Parent=gene-RM615_RS07955;anticodon=(pos:202518..202520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS07955;product=tRNA-Ser NZ_JAVRJW010000004.1 tRNAscan-SE exon 202482 202574 . + . ID=exon-RM615_RS07955-1;Parent=rna-RM615_RS07955;anticodon=(pos:202518..202520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS07955;product=tRNA-Ser NZ_JAVRJW010000004.1 RefSeq gene 202687 202857 . + . ID=gene-RM615_RS07960;Name=RM615_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07960;old_locus_tag=RM615_07970 NZ_JAVRJW010000004.1 GeneMarkS-2+ CDS 202687 202857 . + 0 ID=cds-WP_157946214.1;Parent=gene-RM615_RS07960;Dbxref=GenBank:WP_157946214.1;Name=WP_157946214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS07960;product=hypothetical protein;protein_id=WP_157946214.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 203158 204594 . + . ID=gene-RM615_RS07965;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=RM615_RS07965;old_locus_tag=RM615_07975 NZ_JAVRJW010000004.1 Protein Homology CDS 203158 204594 . + 0 ID=cds-WP_103158698.1;Parent=gene-RM615_RS07965;Dbxref=GenBank:WP_103158698.1;Name=WP_103158698.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279382.1;locus_tag=RM615_RS07965;product=PTS system trehalose-specific EIIBC component;protein_id=WP_103158698.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 204611 206251 . + . ID=gene-RM615_RS07970;Name=RM615_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07970;old_locus_tag=RM615_07980 NZ_JAVRJW010000004.1 Protein Homology CDS 204611 206251 . + 0 ID=cds-WP_103158697.1;Parent=gene-RM615_RS07970;Dbxref=GenBank:WP_103158697.1;Name=WP_103158697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454507.1;locus_tag=RM615_RS07970;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_103158697.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 206267 206992 . + . ID=gene-RM615_RS07975;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=RM615_RS07975;old_locus_tag=RM615_07985 NZ_JAVRJW010000004.1 Protein Homology CDS 206267 206992 . + 0 ID=cds-WP_103158696.1;Parent=gene-RM615_RS07975;Dbxref=GenBank:WP_103158696.1;Name=WP_103158696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303885.1;locus_tag=RM615_RS07975;product=trehalose operon repressor;protein_id=WP_103158696.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 207086 207355 . + . ID=gene-RM615_RS07980;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=RM615_RS07980;old_locus_tag=RM615_07990 NZ_JAVRJW010000004.1 cmsearch SRP_RNA 207086 207355 . + . ID=rna-RM615_RS07980;Parent=gene-RM615_RS07980;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS07980;product=signal recognition particle sRNA large type NZ_JAVRJW010000004.1 cmsearch exon 207086 207355 . + . ID=exon-RM615_RS07980-1;Parent=rna-RM615_RS07980;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM615_RS07980;product=signal recognition particle sRNA large type NZ_JAVRJW010000004.1 RefSeq gene 207535 208068 . + . ID=gene-RM615_RS07985;Name=RM615_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07985;old_locus_tag=RM615_07995 NZ_JAVRJW010000004.1 Protein Homology CDS 207535 208068 . + 0 ID=cds-WP_037577441.1;Parent=gene-RM615_RS07985;Dbxref=GenBank:WP_037577441.1;Name=WP_037577441.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=RM615_RS07985;product=GNAT family N-acetyltransferase;protein_id=WP_037577441.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 208134 209822 . + . ID=gene-RM615_RS07990;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=RM615_RS07990;old_locus_tag=RM615_08000 NZ_JAVRJW010000004.1 Protein Homology CDS 208134 209822 . + 0 ID=cds-WP_105963615.1;Parent=gene-RM615_RS07990;Dbxref=GenBank:WP_105963615.1;Name=WP_105963615.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=RM615_RS07990;product=DNA polymerase III subunit gamma/tau;protein_id=WP_105963615.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 209932 210252 . + . ID=gene-RM615_RS07995;Name=RM615_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS07995;old_locus_tag=RM615_08005 NZ_JAVRJW010000004.1 Protein Homology CDS 209932 210252 . + 0 ID=cds-WP_037564914.1;Parent=gene-RM615_RS07995;Dbxref=GenBank:WP_037564914.1;Name=WP_037564914.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=RM615_RS07995;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_037564914.1;transl_table=11 NZ_JAVRJW010000004.1 RefSeq gene 210254 210850 . + . ID=gene-RM615_RS08000;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=RM615_RS08000;old_locus_tag=RM615_08010 NZ_JAVRJW010000004.1 Protein Homology CDS 210254 210850 . + 0 ID=cds-WP_037577434.1;Parent=gene-RM615_RS08000;Dbxref=GenBank:WP_037577434.1;Name=WP_037577434.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=RM615_RS08000;product=recombination mediator RecR;protein_id=WP_037577434.1;transl_table=11 ##sequence-region NZ_JAVRJW010000005.1 1 134047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000005.1 RefSeq region 1 134047 . + . ID=NZ_JAVRJW010000005.1:1..134047;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000005.1 RefSeq pseudogene 1 161 . - . ID=gene-RM615_RS08005;Name=RM615_RS08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS08005;old_locus_tag=RM615_08015;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJW010000005.1 Protein Homology CDS 1 161 . - 0 ID=cds-RM615_RS08005;Parent=gene-RM615_RS08005;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM615_RS08005;partial=true;product=deoxyribose-phosphate aldolase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 405 1232 . + . ID=gene-RM615_RS08010;Name=RM615_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08010;old_locus_tag=RM615_08020 NZ_JAVRJW010000005.1 Protein Homology CDS 405 1232 . + 0 ID=cds-WP_311539444.1;Parent=gene-RM615_RS08010;Dbxref=GenBank:WP_311539444.1;Name=WP_311539444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=RM615_RS08010;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_311539444.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 1229 1843 . + . ID=gene-RM615_RS08015;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=RM615_RS08015;old_locus_tag=RM615_08025 NZ_JAVRJW010000005.1 Protein Homology CDS 1229 1843 . + 0 ID=cds-WP_311539443.1;Parent=gene-RM615_RS08015;Dbxref=GenBank:WP_311539443.1;Name=WP_311539443.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=RM615_RS08015;product=ATP phosphoribosyltransferase;protein_id=WP_311539443.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 1833 3083 . + . ID=gene-RM615_RS08020;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=RM615_RS08020;old_locus_tag=RM615_08030 NZ_JAVRJW010000005.1 Protein Homology CDS 1833 3083 . + 0 ID=cds-WP_311539442.1;Parent=gene-RM615_RS08020;Dbxref=GenBank:WP_311539442.1;Name=WP_311539442.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302397.1;locus_tag=RM615_RS08020;product=histidinol dehydrogenase;protein_id=WP_311539442.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 3089 4099 . + . ID=gene-RM615_RS08025;Name=RM615_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08025;old_locus_tag=RM615_08035 NZ_JAVRJW010000005.1 Protein Homology CDS 3089 4099 . + 0 ID=cds-WP_311539441.1;Parent=gene-RM615_RS08025;Dbxref=GenBank:WP_311539441.1;Name=WP_311539441.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=RM615_RS08025;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_311539441.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 4083 4658 . + . ID=gene-RM615_RS08030;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=RM615_RS08030;old_locus_tag=RM615_08040 NZ_JAVRJW010000005.1 Protein Homology CDS 4083 4658 . + 0 ID=cds-WP_037577145.1;Parent=gene-RM615_RS08030;Dbxref=GenBank:WP_037577145.1;Name=WP_037577145.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640272.1;locus_tag=RM615_RS08030;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_037577145.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 4655 5230 . + . ID=gene-RM615_RS08035;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=RM615_RS08035;old_locus_tag=RM615_08045 NZ_JAVRJW010000005.1 Protein Homology CDS 4655 5230 . + 0 ID=cds-WP_103159075.1;Parent=gene-RM615_RS08035;Dbxref=GenBank:WP_103159075.1;Name=WP_103159075.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=RM615_RS08035;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_103159075.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 5223 5927 . + . ID=gene-RM615_RS08040;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=RM615_RS08040;old_locus_tag=RM615_08050 NZ_JAVRJW010000005.1 Protein Homology CDS 5223 5927 . + 0 ID=cds-WP_037577139.1;Parent=gene-RM615_RS08040;Dbxref=GenBank:WP_037577139.1;Name=WP_037577139.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=RM615_RS08040;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_037577139.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 5924 6682 . + . ID=gene-RM615_RS11180;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=RM615_RS11180 NZ_JAVRJW010000005.1 Protein Homology CDS 5924 6682 . + 0 ID=cds-WP_105963301.1;Parent=gene-RM615_RS11180;Dbxref=GenBank:WP_105963301.1;Name=WP_105963301.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592599.1;locus_tag=RM615_RS11180;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_105963301.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 6679 7308 . + . ID=gene-RM615_RS11185;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=RM615_RS11185 NZ_JAVRJW010000005.1 Protein Homology CDS 6679 7308 . + 0 ID=cds-WP_105963300.1;Parent=gene-RM615_RS11185;Dbxref=GenBank:WP_105963300.1;Name=WP_105963300.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=RM615_RS11185;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_105963300.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 7422 8471 . - . ID=gene-RM615_RS08050;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM615_RS08050;old_locus_tag=RM615_08060 NZ_JAVRJW010000005.1 Protein Homology CDS 7422 8471 . - 0 ID=cds-WP_234014777.1;Parent=gene-RM615_RS08050;Dbxref=GenBank:WP_234014777.1;Name=WP_234014777.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506553.1;locus_tag=RM615_RS08050;product=ornithine carbamoyltransferase;protein_id=WP_234014777.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 8678 9127 . - . ID=gene-RM615_RS08055;Name=RM615_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08055;old_locus_tag=RM615_08065 NZ_JAVRJW010000005.1 Protein Homology CDS 8678 9127 . - 0 ID=cds-WP_311540685.1;Parent=gene-RM615_RS08055;Dbxref=GenBank:WP_311540685.1;Name=WP_311540685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899968.1;locus_tag=RM615_RS08055;product=DUF1801 domain-containing protein;protein_id=WP_311540685.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 9152 9799 . - . ID=gene-RM615_RS08060;Name=RM615_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08060;old_locus_tag=RM615_08070 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 9152 9799 . - 0 ID=cds-WP_037577127.1;Parent=gene-RM615_RS08060;Dbxref=GenBank:WP_037577127.1;Name=WP_037577127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08060;product=zinc ribbon domain-containing protein;protein_id=WP_037577127.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 10130 11824 . - . ID=gene-RM615_RS08065;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=RM615_RS08065;old_locus_tag=RM615_08075 NZ_JAVRJW010000005.1 Protein Homology CDS 10130 11824 . - 0 ID=cds-WP_103159081.1;Parent=gene-RM615_RS08065;Dbxref=GenBank:WP_103159081.1;Name=WP_103159081.1;Ontology_term=GO:0031456,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=RM615_RS08065;product=choline dehydrogenase;protein_id=WP_103159081.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 11846 13345 . - . ID=gene-RM615_RS08070;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=RM615_RS08070;old_locus_tag=RM615_08080 NZ_JAVRJW010000005.1 Protein Homology CDS 11846 13345 . - 0 ID=cds-WP_037577122.1;Parent=gene-RM615_RS08070;Dbxref=GenBank:WP_037577122.1;Name=WP_037577122.1;Ontology_term=GO:0031456,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471432.1;locus_tag=RM615_RS08070;product=betaine-aldehyde dehydrogenase;protein_id=WP_037577122.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 13556 14116 . + . ID=gene-RM615_RS08075;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=RM615_RS08075;old_locus_tag=RM615_08085 NZ_JAVRJW010000005.1 Protein Homology CDS 13556 14116 . + 0 ID=cds-WP_037577119.1;Parent=gene-RM615_RS08075;Dbxref=GenBank:WP_037577119.1;Name=WP_037577119.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198602.1;locus_tag=RM615_RS08075;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_037577119.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 14341 15957 . - . ID=gene-RM615_RS08080;Name=RM615_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08080;old_locus_tag=RM615_08090 NZ_JAVRJW010000005.1 Protein Homology CDS 14341 15957 . - 0 ID=cds-WP_037577153.1;Parent=gene-RM615_RS08080;Dbxref=GenBank:WP_037577153.1;Name=WP_037577153.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452081.1;locus_tag=RM615_RS08080;product=BCCT family transporter;protein_id=WP_037577153.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 16706 16870 . + . ID=gene-RM615_RS08085;Name=RM615_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08085;old_locus_tag=RM615_08095 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 16706 16870 . + 0 ID=cds-WP_311541062.1;Parent=gene-RM615_RS08085;Dbxref=GenBank:WP_311541062.1;Name=WP_311541062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08085;product=hypothetical protein;protein_id=WP_311541062.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 17212 17691 . - . ID=gene-RM615_RS08090;Name=RM615_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08090;old_locus_tag=RM615_08100 NZ_JAVRJW010000005.1 Protein Homology CDS 17212 17691 . - 0 ID=cds-WP_103159598.1;Parent=gene-RM615_RS08090;Dbxref=GenBank:WP_103159598.1;Name=WP_103159598.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024917.7;locus_tag=RM615_RS08090;product=GNAT family N-acetyltransferase;protein_id=WP_103159598.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq pseudogene 17792 18506 . - . ID=gene-RM615_RS08095;Name=RM615_RS08095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS08095;old_locus_tag=RM615_08105;pseudo=true NZ_JAVRJW010000005.1 Protein Homology CDS 17792 18506 . - 0 ID=cds-RM615_RS08095;Parent=gene-RM615_RS08095;Note=frameshifted;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109886.1;locus_tag=RM615_RS08095;product=flavin reductase family protein;pseudo=true;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 18656 19936 . - . ID=gene-RM615_RS08100;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=RM615_RS08100;old_locus_tag=RM615_08110 NZ_JAVRJW010000005.1 Protein Homology CDS 18656 19936 . - 0 ID=cds-WP_311541063.1;Parent=gene-RM615_RS08100;Dbxref=GenBank:WP_311541063.1;Name=WP_311541063.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168435.1;locus_tag=RM615_RS08100;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_311541063.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 19949 20962 . - . ID=gene-RM615_RS08105;Name=RM615_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08105;old_locus_tag=RM615_08115 NZ_JAVRJW010000005.1 Protein Homology CDS 19949 20962 . - 0 ID=cds-WP_157948787.1;Parent=gene-RM615_RS08105;Dbxref=GenBank:WP_157948787.1;Name=WP_157948787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021106.7;locus_tag=RM615_RS08105;product=phospholipase D family protein;protein_id=WP_157948787.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 20964 21647 . - . ID=gene-RM615_RS08110;Name=RM615_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08110;old_locus_tag=RM615_08120 NZ_JAVRJW010000005.1 Protein Homology CDS 20964 21647 . - 0 ID=cds-WP_107388696.1;Parent=gene-RM615_RS08110;Dbxref=GenBank:WP_107388696.1;Name=WP_107388696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168433.1;locus_tag=RM615_RS08110;product=DUF6339 family protein;protein_id=WP_107388696.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 21652 22602 . - . ID=gene-RM615_RS08115;Name=RM615_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08115;old_locus_tag=RM615_08125 NZ_JAVRJW010000005.1 Protein Homology CDS 21652 22602 . - 0 ID=cds-WP_107388697.1;Parent=gene-RM615_RS08115;Dbxref=GenBank:WP_107388697.1;Name=WP_107388697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168432.1;locus_tag=RM615_RS08115;product=hypothetical protein;protein_id=WP_107388697.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 22605 24641 . - . ID=gene-RM615_RS08120;Name=RM615_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08120;old_locus_tag=RM615_08130 NZ_JAVRJW010000005.1 Protein Homology CDS 22605 24641 . - 0 ID=cds-WP_233664448.1;Parent=gene-RM615_RS08120;Dbxref=GenBank:WP_233664448.1;Name=WP_233664448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834989.1;locus_tag=RM615_RS08120;product=hypothetical protein;protein_id=WP_233664448.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 24645 27395 . - . ID=gene-RM615_RS08125;Name=RM615_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08125;old_locus_tag=RM615_08135 NZ_JAVRJW010000005.1 Protein Homology CDS 24645 27395 . - 0 ID=cds-WP_119513141.1;Parent=gene-RM615_RS08125;Dbxref=GenBank:WP_119513141.1;Name=WP_119513141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168430.1;locus_tag=RM615_RS08125;product=Z1 domain-containing protein;protein_id=WP_119513141.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 27564 28271 . + . ID=gene-RM615_RS08130;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=RM615_RS08130;old_locus_tag=RM615_08140 NZ_JAVRJW010000005.1 Protein Homology CDS 27564 28271 . + 0 ID=cds-WP_105963293.1;Parent=gene-RM615_RS08130;Dbxref=GenBank:WP_105963293.1;Name=WP_105963293.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=RM615_RS08130;product=acetolactate decarboxylase;protein_id=WP_105963293.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 28405 29832 . - . ID=gene-RM615_RS08135;Name=RM615_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08135;old_locus_tag=RM615_08145 NZ_JAVRJW010000005.1 Protein Homology CDS 28405 29832 . - 0 ID=cds-WP_311541064.1;Parent=gene-RM615_RS08135;Dbxref=GenBank:WP_311541064.1;Name=WP_311541064.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501410.1;locus_tag=RM615_RS08135;product=alkaline phosphatase;protein_id=WP_311541064.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 30096 31535 . - . ID=gene-RM615_RS08140;Name=RM615_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08140;old_locus_tag=RM615_08150 NZ_JAVRJW010000005.1 Protein Homology CDS 30096 31535 . - 0 ID=cds-WP_311541065.1;Parent=gene-RM615_RS08140;Dbxref=GenBank:WP_311541065.1;Name=WP_311541065.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506893.1;locus_tag=RM615_RS08140;product=alkaline phosphatase;protein_id=WP_311541065.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 31787 32407 . - . ID=gene-RM615_RS08145;Name=RM615_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08145;old_locus_tag=RM615_08155 NZ_JAVRJW010000005.1 Protein Homology CDS 31787 32407 . - 0 ID=cds-WP_311541066.1;Parent=gene-RM615_RS08145;Dbxref=GenBank:WP_311541066.1;Name=WP_311541066.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999574.1;locus_tag=RM615_RS08145;product=DedA family protein;protein_id=WP_311541066.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 32518 32913 . - . ID=gene-RM615_RS08150;Name=RM615_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08150;old_locus_tag=RM615_08160 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 32518 32913 . - 0 ID=cds-WP_037577096.1;Parent=gene-RM615_RS08150;Dbxref=GenBank:WP_037577096.1;Name=WP_037577096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08150;product=hypothetical protein;protein_id=WP_037577096.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 33191 34204 . - . ID=gene-RM615_RS08155;Name=RM615_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08155;old_locus_tag=RM615_08165 NZ_JAVRJW010000005.1 Protein Homology CDS 33191 34204 . - 0 ID=cds-WP_103158748.1;Parent=gene-RM615_RS08155;Dbxref=GenBank:WP_103158748.1;Name=WP_103158748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215650.1;locus_tag=RM615_RS08155;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_103158748.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 34418 35095 . + . ID=gene-RM615_RS08160;Name=RM615_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08160;old_locus_tag=RM615_08170 NZ_JAVRJW010000005.1 Protein Homology CDS 34418 35095 . + 0 ID=cds-WP_037577090.1;Parent=gene-RM615_RS08160;Dbxref=GenBank:WP_037577090.1;Name=WP_037577090.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478666.1;locus_tag=RM615_RS08160;product=response regulator transcription factor;protein_id=WP_037577090.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 35088 36563 . + . ID=gene-RM615_RS08165;Name=RM615_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08165;old_locus_tag=RM615_08175 NZ_JAVRJW010000005.1 Protein Homology CDS 35088 36563 . + 0 ID=cds-WP_107368071.1;Parent=gene-RM615_RS08165;Dbxref=GenBank:WP_107368071.1;Name=WP_107368071.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.7;locus_tag=RM615_RS08165;product=sensor histidine kinase;protein_id=WP_107368071.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 36794 37228 . - . ID=gene-RM615_RS08170;Name=RM615_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08170;old_locus_tag=RM615_08180 NZ_JAVRJW010000005.1 Protein Homology CDS 36794 37228 . - 0 ID=cds-WP_311541068.1;Parent=gene-RM615_RS08170;Dbxref=GenBank:WP_311541068.1;Name=WP_311541068.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: protein motif:HMM:NF015925.7;locus_tag=RM615_RS08170;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_311541068.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 37448 38935 . - . ID=gene-RM615_RS08175;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM615_RS08175;old_locus_tag=RM615_08185 NZ_JAVRJW010000005.1 Protein Homology CDS 37448 38935 . - 0 ID=cds-WP_107368072.1;Parent=gene-RM615_RS08175;Dbxref=GenBank:WP_107368072.1;Name=WP_107368072.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=RM615_RS08175;product=cardiolipin synthase;protein_id=WP_107368072.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 39687 40616 . + . ID=gene-RM615_RS08180;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=RM615_RS08180;old_locus_tag=RM615_08190 NZ_JAVRJW010000005.1 Protein Homology CDS 39687 40616 . + 0 ID=cds-WP_375713006.1;Parent=gene-RM615_RS08180;Dbxref=GenBank:WP_375713006.1;Name=WP_375713006.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434903.1;locus_tag=RM615_RS08180;product=sphingomyelin phosphodiesterase;protein_id=WP_375713006.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 41303 42463 . + . ID=gene-RM615_RS08185;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=RM615_RS08185;old_locus_tag=RM615_08195 NZ_JAVRJW010000005.1 Protein Homology CDS 41303 42463 . + 0 ID=cds-WP_105963285.1;Parent=gene-RM615_RS08185;Dbxref=GenBank:WP_105963285.1;Name=WP_105963285.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=RM615_RS08185;product=poly-gamma-glutamate synthase PgsB;protein_id=WP_105963285.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 42466 42918 . + . ID=gene-RM615_RS08190;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=RM615_RS08190;old_locus_tag=RM615_08200 NZ_JAVRJW010000005.1 Protein Homology CDS 42466 42918 . + 0 ID=cds-WP_037577418.1;Parent=gene-RM615_RS08190;Dbxref=GenBank:WP_037577418.1;Name=WP_037577418.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480095.1;locus_tag=RM615_RS08190;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WP_037577418.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 42933 44003 . + . ID=gene-RM615_RS08195;Name=RM615_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08195;old_locus_tag=RM615_08205 NZ_JAVRJW010000005.1 Protein Homology CDS 42933 44003 . + 0 ID=cds-WP_311541070.1;Parent=gene-RM615_RS08195;Dbxref=GenBank:WP_311541070.1;Name=WP_311541070.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302327.1;locus_tag=RM615_RS08195;product=CapA family protein;protein_id=WP_311541070.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 43993 44283 . + . ID=gene-RM615_RS08200;Name=RM615_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08200;old_locus_tag=RM615_08210 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 43993 44283 . + 0 ID=cds-WP_037577412.1;Parent=gene-RM615_RS08200;Dbxref=GenBank:WP_037577412.1;Name=WP_037577412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08200;product=hypothetical protein;protein_id=WP_037577412.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 44267 45865 . + . ID=gene-RM615_RS08205;Name=RM615_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08205;old_locus_tag=RM615_08215 NZ_JAVRJW010000005.1 Protein Homology CDS 44267 45865 . + 0 ID=cds-WP_105963283.1;Parent=gene-RM615_RS08205;Dbxref=GenBank:WP_105963283.1;Name=WP_105963283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432872.1;locus_tag=RM615_RS08205;product=gamma-glutamyltransferase;protein_id=WP_105963283.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 46087 48651 . - . ID=gene-RM615_RS08210;Name=RM615_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08210;old_locus_tag=RM615_08220 NZ_JAVRJW010000005.1 Protein Homology CDS 46087 48651 . - 0 ID=cds-WP_229717303.1;Parent=gene-RM615_RS08210;Dbxref=GenBank:WP_229717303.1;Name=WP_229717303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450569.1;locus_tag=RM615_RS08210;product=YfhO family protein;protein_id=WP_229717303.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 48936 49589 . - . ID=gene-RM615_RS08215;Name=RM615_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08215;old_locus_tag=RM615_08225 NZ_JAVRJW010000005.1 Protein Homology CDS 48936 49589 . - 0 ID=cds-WP_157946066.1;Parent=gene-RM615_RS08215;Dbxref=GenBank:WP_157946066.1;Name=WP_157946066.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.7;locus_tag=RM615_RS08215;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_157946066.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 50133 50369 . + . ID=gene-RM615_RS08220;Name=RM615_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08220;old_locus_tag=RM615_08230 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 50133 50369 . + 0 ID=cds-WP_107360689.1;Parent=gene-RM615_RS08220;Dbxref=GenBank:WP_107360689.1;Name=WP_107360689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08220;product=hypothetical protein;protein_id=WP_107360689.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 50745 51230 . + . ID=gene-RM615_RS08225;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM615_RS08225;old_locus_tag=RM615_08235 NZ_JAVRJW010000005.1 Protein Homology CDS 50745 51230 . + 0 ID=cds-WP_107360688.1;Parent=gene-RM615_RS08225;Dbxref=GenBank:WP_107360688.1;Name=WP_107360688.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM615_RS08225;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_107360688.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 51273 52544 . - . ID=gene-RM615_RS08230;Name=RM615_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08230;old_locus_tag=RM615_08240 NZ_JAVRJW010000005.1 Protein Homology CDS 51273 52544 . - 0 ID=cds-WP_107364062.1;Parent=gene-RM615_RS08230;Dbxref=GenBank:WP_107364062.1;Name=WP_107364062.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF033912.1;locus_tag=RM615_RS08230;product=mechanosensitive ion channel;protein_id=WP_107364062.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq pseudogene 52664 52747 . + . ID=gene-RM615_RS11250;Name=RM615_RS11250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11250;partial=true;pseudo=true;start_range=.,52664 NZ_JAVRJW010000005.1 Protein Homology CDS 52664 52747 . + 0 ID=cds-RM615_RS11250;Parent=gene-RM615_RS11250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432800.1;locus_tag=RM615_RS11250;partial=true;product=aggregation-promoting factor C-terminal-like domain-containing protein;pseudo=true;start_range=.,52664;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 52889 54484 . - . ID=gene-RM615_RS08235;Name=RM615_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08235;old_locus_tag=RM615_08245 NZ_JAVRJW010000005.1 Protein Homology CDS 52889 54484 . - 0 ID=cds-WP_311541073.1;Parent=gene-RM615_RS08235;Dbxref=GenBank:WP_311541073.1;Name=WP_311541073.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274537.1;locus_tag=RM615_RS08235;product=FGGY-family carbohydrate kinase;protein_id=WP_311541073.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 54882 56240 . + . ID=gene-RM615_RS08240;Name=RM615_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08240;old_locus_tag=RM615_08250 NZ_JAVRJW010000005.1 Protein Homology CDS 54882 56240 . + 0 ID=cds-WP_037576147.1;Parent=gene-RM615_RS08240;Dbxref=GenBank:WP_037576147.1;Name=WP_037576147.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549730.1;locus_tag=RM615_RS08240;product=alanine/glycine:cation symporter family protein;protein_id=WP_037576147.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 56561 56662 . + . ID=gene-RM615_RS08245;Name=RM615_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08245;old_locus_tag=RM615_08255 NZ_JAVRJW010000005.1 Protein Homology CDS 56561 56662 . + 0 ID=cds-WP_107358294.1;Parent=gene-RM615_RS08245;Dbxref=GenBank:WP_107358294.1;Name=WP_107358294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM615_RS08245;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107358294.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 57099 57785 . + . ID=gene-RM615_RS08250;Name=RM615_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08250;old_locus_tag=RM615_08260 NZ_JAVRJW010000005.1 Protein Homology CDS 57099 57785 . + 0 ID=cds-WP_105996911.1;Parent=gene-RM615_RS08250;Dbxref=GenBank:WP_105996911.1;Name=WP_105996911.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM615_RS08250;product=Crp/Fnr family transcriptional regulator;protein_id=WP_105996911.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 57762 58388 . - . ID=gene-RM615_RS08255;Name=RM615_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08255;old_locus_tag=RM615_08265 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 57762 58388 . - 0 ID=cds-WP_311541074.1;Parent=gene-RM615_RS08255;Dbxref=GenBank:WP_311541074.1;Name=WP_311541074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08255;product=hypothetical protein;protein_id=WP_311541074.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 58792 58956 . - . ID=gene-RM615_RS08260;Name=RM615_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08260;old_locus_tag=RM615_08270 NZ_JAVRJW010000005.1 Protein Homology CDS 58792 58956 . - 0 ID=cds-WP_165885403.1;Parent=gene-RM615_RS08260;Dbxref=GenBank:WP_165885403.1;Name=WP_165885403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361781.1;locus_tag=RM615_RS08260;product=hypothetical protein;protein_id=WP_165885403.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 59323 59439 . - . ID=gene-RM615_RS08265;Name=RM615_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08265;old_locus_tag=RM615_08275 NZ_JAVRJW010000005.1 Protein Homology CDS 59323 59439 . - 0 ID=cds-WP_084276069.1;Parent=gene-RM615_RS08265;Dbxref=GenBank:WP_084276069.1;Name=WP_084276069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022861.7;locus_tag=RM615_RS08265;product=subtilosin A family bacteriocin;protein_id=WP_084276069.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 59775 61169 . - . ID=gene-RM615_RS08270;Name=RM615_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08270;old_locus_tag=RM615_08280 NZ_JAVRJW010000005.1 Protein Homology CDS 59775 61169 . - 0 ID=cds-WP_103158950.1;Parent=gene-RM615_RS08270;Dbxref=GenBank:WP_103158950.1;Name=WP_103158950.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274758.1;locus_tag=RM615_RS08270;product=MFS transporter;protein_id=WP_103158950.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 61533 62759 . - . ID=gene-RM615_RS08275;Name=RM615_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08275;old_locus_tag=RM615_08285 NZ_JAVRJW010000005.1 Protein Homology CDS 61533 62759 . - 0 ID=cds-WP_103158949.1;Parent=gene-RM615_RS08275;Dbxref=GenBank:WP_103158949.1;Name=WP_103158949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503250.1;locus_tag=RM615_RS08275;product=ArgE/DapE family deacylase;protein_id=WP_103158949.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 62784 64217 . - . ID=gene-RM615_RS08280;Name=RM615_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08280;old_locus_tag=RM615_08290 NZ_JAVRJW010000005.1 Protein Homology CDS 62784 64217 . - 0 ID=cds-WP_172458423.1;Parent=gene-RM615_RS08280;Dbxref=GenBank:WP_172458423.1;Name=WP_172458423.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723332.1;locus_tag=RM615_RS08280;product=MDR family MFS transporter;protein_id=WP_172458423.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 64402 65340 . + . ID=gene-RM615_RS08285;Name=RM615_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08285;old_locus_tag=RM615_08295 NZ_JAVRJW010000005.1 Protein Homology CDS 64402 65340 . + 0 ID=cds-WP_107360685.1;Parent=gene-RM615_RS08285;Dbxref=GenBank:WP_107360685.1;Name=WP_107360685.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471437.1;locus_tag=RM615_RS08285;product=ketopantoate reductase family protein;protein_id=WP_107360685.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 65407 66360 . - . ID=gene-RM615_RS08290;Name=RM615_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08290;old_locus_tag=RM615_08300 NZ_JAVRJW010000005.1 Protein Homology CDS 65407 66360 . - 0 ID=cds-WP_107378402.1;Parent=gene-RM615_RS08290;Dbxref=GenBank:WP_107378402.1;Name=WP_107378402.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.8;locus_tag=RM615_RS08290;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_107378402.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 66699 67382 . + . ID=gene-RM615_RS08295;Name=RM615_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08295;old_locus_tag=RM615_08305 NZ_JAVRJW010000005.1 Protein Homology CDS 66699 67382 . + 0 ID=cds-WP_105963275.1;Parent=gene-RM615_RS08295;Dbxref=GenBank:WP_105963275.1;Name=WP_105963275.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: protein motif:HMM:NF015277.7;locus_tag=RM615_RS08295;product=acetolactate decarboxylase;protein_id=WP_105963275.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 67756 69348 . - . ID=gene-RM615_RS08300;Name=RM615_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08300;old_locus_tag=RM615_08310 NZ_JAVRJW010000005.1 Protein Homology CDS 67756 69348 . - 0 ID=cds-WP_107388328.1;Parent=gene-RM615_RS08300;Dbxref=GenBank:WP_107388328.1;Name=WP_107388328.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=RM615_RS08300;product=solute:sodium symporter family transporter;protein_id=WP_107388328.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 69749 70300 . - . ID=gene-RM615_RS08305;Name=RM615_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08305;old_locus_tag=RM615_08315 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 69749 70300 . - 0 ID=cds-WP_103158945.1;Parent=gene-RM615_RS08305;Dbxref=GenBank:WP_103158945.1;Name=WP_103158945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08305;product=hypothetical protein;protein_id=WP_103158945.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 70896 72635 . + . ID=gene-RM615_RS08310;Name=RM615_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08310;old_locus_tag=RM615_08320 NZ_JAVRJW010000005.1 Protein Homology CDS 70896 72635 . + 0 ID=cds-WP_311541076.1;Parent=gene-RM615_RS08310;Dbxref=GenBank:WP_311541076.1;Name=WP_311541076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473186.1;locus_tag=RM615_RS08310;product=DUF2075 domain-containing protein;protein_id=WP_311541076.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 72631 72963 . + . ID=gene-RM615_RS08315;Name=RM615_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08315;old_locus_tag=RM615_08325 NZ_JAVRJW010000005.1 Protein Homology CDS 72631 72963 . + 0 ID=cds-WP_105963359.1;Parent=gene-RM615_RS08315;Dbxref=GenBank:WP_105963359.1;Name=WP_105963359.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274571.1;locus_tag=RM615_RS08315;product=nucleotide pyrophosphohydrolase;protein_id=WP_105963359.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 73205 75001 . + . ID=gene-RM615_RS08320;Name=RM615_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08320;old_locus_tag=RM615_08330 NZ_JAVRJW010000005.1 Protein Homology CDS 73205 75001 . + 0 ID=cds-WP_311541077.1;Parent=gene-RM615_RS08320;Dbxref=GenBank:WP_311541077.1;Name=WP_311541077.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379833.1;locus_tag=RM615_RS08320;product=acyltransferase family protein;protein_id=WP_311541077.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 75153 75863 . + . ID=gene-RM615_RS08325;Name=RM615_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08325;old_locus_tag=RM615_08335 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 75153 75863 . + 0 ID=cds-WP_107367054.1;Parent=gene-RM615_RS08325;Dbxref=GenBank:WP_107367054.1;Name=WP_107367054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08325;product=hypothetical protein;protein_id=WP_107367054.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 75964 77178 . - . ID=gene-RM615_RS08330;Name=RM615_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08330;old_locus_tag=RM615_08340 NZ_JAVRJW010000005.1 Protein Homology CDS 75964 77178 . - 0 ID=cds-WP_311541094.1;Parent=gene-RM615_RS08330;Dbxref=GenBank:WP_311541094.1;Name=WP_311541094.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF006143.0;locus_tag=RM615_RS08330;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_311541094.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 77575 78135 . - . ID=gene-RM615_RS08335;Name=RM615_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08335;old_locus_tag=RM615_08345 NZ_JAVRJW010000005.1 Protein Homology CDS 77575 78135 . - 0 ID=cds-WP_103159191.1;Parent=gene-RM615_RS08335;Dbxref=GenBank:WP_103159191.1;Name=WP_103159191.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM615_RS08335;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103159191.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 78146 78937 . - . ID=gene-RM615_RS08340;Name=RM615_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08340;old_locus_tag=RM615_08350 NZ_JAVRJW010000005.1 Protein Homology CDS 78146 78937 . - 0 ID=cds-WP_037576189.1;Parent=gene-RM615_RS08340;Dbxref=GenBank:WP_037576189.1;Name=WP_037576189.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638060.1;locus_tag=RM615_RS08340;product=arylamine N-acetyltransferase family protein;protein_id=WP_037576189.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 79207 79758 . + . ID=gene-RM615_RS08345;Name=RM615_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08345;old_locus_tag=RM615_08355 NZ_JAVRJW010000005.1 Protein Homology CDS 79207 79758 . + 0 ID=cds-WP_037576192.1;Parent=gene-RM615_RS08345;Dbxref=GenBank:WP_037576192.1;Name=WP_037576192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606891.1;locus_tag=RM615_RS08345;product=isochorismatase family protein;protein_id=WP_037576192.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 79770 80963 . + . ID=gene-RM615_RS08350;Name=tcaB;gbkey=Gene;gene=tcaB;gene_biotype=protein_coding;locus_tag=RM615_RS08350;old_locus_tag=RM615_08360 NZ_JAVRJW010000005.1 Protein Homology CDS 79770 80963 . + 0 ID=cds-WP_107363685.1;Parent=gene-RM615_RS08350;Dbxref=GenBank:WP_107363685.1;Name=WP_107363685.1;gbkey=CDS;gene=tcaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168887.1;locus_tag=RM615_RS08350;product=putative multidrug effflux MFS transporter TcaB;protein_id=WP_107363685.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 81261 82154 . + . ID=gene-RM615_RS08355;Name=RM615_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08355;old_locus_tag=RM615_08365 NZ_JAVRJW010000005.1 Protein Homology CDS 81261 82154 . + 0 ID=cds-WP_103159195.1;Parent=gene-RM615_RS08355;Dbxref=GenBank:WP_103159195.1;Name=WP_103159195.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471440.1;locus_tag=RM615_RS08355;product=fructose bisphosphate aldolase;protein_id=WP_103159195.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq pseudogene 82201 83205 . - . ID=gene-RM615_RS08360;Name=RM615_RS08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS08360;old_locus_tag=RM615_08370;partial=true;pseudo=true;start_range=.,82201 NZ_JAVRJW010000005.1 Protein Homology CDS 82201 83205 . - 0 ID=cds-RM615_RS08360;Parent=gene-RM615_RS08360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727767.1;locus_tag=RM615_RS08360;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;start_range=.,82201;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 83407 84420 . + . ID=gene-RM615_RS08365;Name=RM615_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08365;old_locus_tag=RM615_08375 NZ_JAVRJW010000005.1 Protein Homology CDS 83407 84420 . + 0 ID=cds-WP_311541078.1;Parent=gene-RM615_RS08365;Dbxref=GenBank:WP_311541078.1;Name=WP_311541078.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019474.7;locus_tag=RM615_RS08365;product=alpha/beta hydrolase;protein_id=WP_311541078.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 84439 85629 . - . ID=gene-RM615_RS08370;Name=RM615_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08370;old_locus_tag=RM615_08380 NZ_JAVRJW010000005.1 Protein Homology CDS 84439 85629 . - 0 ID=cds-WP_103159198.1;Parent=gene-RM615_RS08370;Dbxref=GenBank:WP_103159198.1;Name=WP_103159198.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM615_RS08370;product=MFS transporter;protein_id=WP_103159198.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 85908 86600 . - . ID=gene-RM615_RS08375;Name=RM615_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08375;old_locus_tag=RM615_08385 NZ_JAVRJW010000005.1 Protein Homology CDS 85908 86600 . - 0 ID=cds-WP_103159199.1;Parent=gene-RM615_RS08375;Dbxref=GenBank:WP_103159199.1;Name=WP_103159199.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=RM615_RS08375;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_103159199.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 86732 86884 . - . ID=gene-RM615_RS08380;Name=RM615_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08380;old_locus_tag=RM615_08390 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 86732 86884 . - 0 ID=cds-WP_311541079.1;Parent=gene-RM615_RS08380;Dbxref=GenBank:WP_311541079.1;Name=WP_311541079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08380;product=hypothetical protein;protein_id=WP_311541079.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 86901 88178 . - . ID=gene-RM615_RS08385;Name=RM615_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08385;old_locus_tag=RM615_08395 NZ_JAVRJW010000005.1 Protein Homology CDS 86901 88178 . - 0 ID=cds-WP_105963265.1;Parent=gene-RM615_RS08385;Dbxref=GenBank:WP_105963265.1;Name=WP_105963265.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=RM615_RS08385;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_105963265.1;transl_table=11 NZ_JAVRJW010000005.1 cmsearch riboswitch 88240 88337 . - . ID=id-NZ_JAVRJW010000005.1:88240..88337;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000005.1 RefSeq gene 88592 89866 . + . ID=gene-RM615_RS08390;Name=RM615_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08390;old_locus_tag=RM615_08400 NZ_JAVRJW010000005.1 Protein Homology CDS 88592 89866 . + 0 ID=cds-WP_172458455.1;Parent=gene-RM615_RS08390;Dbxref=GenBank:WP_172458455.1;Name=WP_172458455.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=RM615_RS08390;product=YSIRK-type signal peptide-containing protein;protein_id=WP_172458455.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 89976 91322 . - . ID=gene-RM615_RS08395;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=RM615_RS08395;old_locus_tag=RM615_08405 NZ_JAVRJW010000005.1 Protein Homology CDS 89976 91322 . - 0 ID=cds-WP_037576224.1;Parent=gene-RM615_RS08395;Dbxref=GenBank:WP_037576224.1;Name=WP_037576224.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167037.1;locus_tag=RM615_RS08395;product=PTS ascorbate transporter subunit IIC;protein_id=WP_037576224.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 91340 91624 . - . ID=gene-RM615_RS08400;Name=RM615_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08400;old_locus_tag=RM615_08410 NZ_JAVRJW010000005.1 Protein Homology CDS 91340 91624 . - 0 ID=cds-WP_037576225.1;Parent=gene-RM615_RS08400;Dbxref=GenBank:WP_037576225.1;Name=WP_037576225.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=RM615_RS08400;product=PTS sugar transporter subunit IIB;protein_id=WP_037576225.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 91626 92069 . - . ID=gene-RM615_RS08405;Name=RM615_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08405;old_locus_tag=RM615_08415 NZ_JAVRJW010000005.1 Protein Homology CDS 91626 92069 . - 0 ID=cds-WP_103159202.1;Parent=gene-RM615_RS08405;Dbxref=GenBank:WP_103159202.1;Name=WP_103159202.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191793.1;locus_tag=RM615_RS08405;product=PTS sugar transporter subunit IIA;protein_id=WP_103159202.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 92071 94014 . - . ID=gene-RM615_RS08410;Name=RM615_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08410;old_locus_tag=RM615_08420 NZ_JAVRJW010000005.1 Protein Homology CDS 92071 94014 . - 0 ID=cds-WP_311541080.1;Parent=gene-RM615_RS08410;Dbxref=GenBank:WP_311541080.1;Name=WP_311541080.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM615_RS08410;product=BglG family transcription antiterminator;protein_id=WP_311541080.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 94325 95650 . - . ID=gene-RM615_RS08415;Name=RM615_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08415;old_locus_tag=RM615_08425 NZ_JAVRJW010000005.1 Protein Homology CDS 94325 95650 . - 0 ID=cds-WP_210433488.1;Parent=gene-RM615_RS08415;Dbxref=GenBank:WP_210433488.1;Name=WP_210433488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471268.1;locus_tag=RM615_RS08415;product=YjiH family protein;protein_id=WP_210433488.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 96083 98086 . - . ID=gene-RM615_RS08420;Name=RM615_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08420;old_locus_tag=RM615_08430 NZ_JAVRJW010000005.1 Protein Homology CDS 96083 98086 . - 0 ID=cds-WP_311541081.1;Parent=gene-RM615_RS08420;Dbxref=GenBank:WP_311541081.1;Name=WP_311541081.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302433.1;locus_tag=RM615_RS08420;product=cation:proton antiporter;protein_id=WP_311541081.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 98110 98601 . - . ID=gene-RM615_RS08425;Name=RM615_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08425;old_locus_tag=RM615_08435 NZ_JAVRJW010000005.1 Protein Homology CDS 98110 98601 . - 0 ID=cds-WP_037576242.1;Parent=gene-RM615_RS08425;Dbxref=GenBank:WP_037576242.1;Name=WP_037576242.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901524.1;locus_tag=RM615_RS08425;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_037576242.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 98686 99588 . - . ID=gene-RM615_RS08430;Name=RM615_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08430;old_locus_tag=RM615_08440 NZ_JAVRJW010000005.1 Protein Homology CDS 98686 99588 . - 0 ID=cds-WP_103159206.1;Parent=gene-RM615_RS08430;Dbxref=GenBank:WP_103159206.1;Name=WP_103159206.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444833.1;locus_tag=RM615_RS08430;product=LysR family transcriptional regulator;protein_id=WP_103159206.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 99708 100895 . + . ID=gene-RM615_RS08435;Name=RM615_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08435;old_locus_tag=RM615_08445 NZ_JAVRJW010000005.1 Protein Homology CDS 99708 100895 . + 0 ID=cds-WP_311541082.1;Parent=gene-RM615_RS08435;Dbxref=GenBank:WP_311541082.1;Name=WP_311541082.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303799.1;locus_tag=RM615_RS08435;product=MFS transporter;protein_id=WP_311541082.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 101485 102399 . - . ID=gene-RM615_RS08440;Name=RM615_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08440;old_locus_tag=RM615_08450 NZ_JAVRJW010000005.1 Protein Homology CDS 101485 102399 . - 0 ID=cds-WP_103159208.1;Parent=gene-RM615_RS08440;Dbxref=GenBank:WP_103159208.1;Name=WP_103159208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003185844.1;locus_tag=RM615_RS08440;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_103159208.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 102418 103356 . - . ID=gene-RM615_RS08445;Name=RM615_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08445;old_locus_tag=RM615_08455 NZ_JAVRJW010000005.1 Protein Homology CDS 102418 103356 . - 0 ID=cds-WP_103159209.1;Parent=gene-RM615_RS08445;Dbxref=GenBank:WP_103159209.1;Name=WP_103159209.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274507.1;locus_tag=RM615_RS08445;product=ABC transporter permease subunit;protein_id=WP_103159209.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 103337 104833 . - . ID=gene-RM615_RS08450;Name=RM615_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08450;old_locus_tag=RM615_08460 NZ_JAVRJW010000005.1 Protein Homology CDS 103337 104833 . - 0 ID=cds-WP_107366353.1;Parent=gene-RM615_RS08450;Dbxref=GenBank:WP_107366353.1;Name=WP_107366353.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930523.1;locus_tag=RM615_RS08450;product=sugar ABC transporter ATP-binding protein;protein_id=WP_107366353.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 104846 105235 . - . ID=gene-RM615_RS08455;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=RM615_RS08455;old_locus_tag=RM615_08465 NZ_JAVRJW010000005.1 Protein Homology CDS 104846 105235 . - 0 ID=cds-WP_311541083.1;Parent=gene-RM615_RS08455;Dbxref=GenBank:WP_311541083.1;Name=WP_311541083.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=RM615_RS08455;product=D-ribose pyranase;protein_id=WP_311541083.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 105228 106109 . - . ID=gene-RM615_RS08460;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=RM615_RS08460;old_locus_tag=RM615_08470 NZ_JAVRJW010000005.1 Protein Homology CDS 105228 106109 . - 0 ID=cds-WP_037576259.1;Parent=gene-RM615_RS08460;Dbxref=GenBank:WP_037576259.1;Name=WP_037576259.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175513.1;locus_tag=RM615_RS08460;product=ribokinase;protein_id=WP_037576259.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 106112 107077 . - . ID=gene-RM615_RS08465;Name=RM615_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08465;old_locus_tag=RM615_08475 NZ_JAVRJW010000005.1 Protein Homology CDS 106112 107077 . - 0 ID=cds-WP_107377292.1;Parent=gene-RM615_RS08465;Dbxref=GenBank:WP_107377292.1;Name=WP_107377292.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=RM615_RS08465;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_107377292.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 107205 108545 . - . ID=gene-RM615_RS08470;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=RM615_RS08470;old_locus_tag=RM615_08480 NZ_JAVRJW010000005.1 Protein Homology CDS 107205 108545 . - 0 ID=cds-WP_107366351.1;Parent=gene-RM615_RS08470;Dbxref=GenBank:WP_107366351.1;Name=WP_107366351.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480193.1;locus_tag=RM615_RS08470;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_107366351.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 108558 109637 . - . ID=gene-RM615_RS08475;Name=RM615_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08475;old_locus_tag=RM615_08485 NZ_JAVRJW010000005.1 Protein Homology CDS 108558 109637 . - 0 ID=cds-WP_037576272.1;Parent=gene-RM615_RS08475;Dbxref=GenBank:WP_037576272.1;Name=WP_037576272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236144.1;locus_tag=RM615_RS08475;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_037576272.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 109775 110035 . + . ID=gene-RM615_RS08480;Name=RM615_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08480;old_locus_tag=RM615_08490 NZ_JAVRJW010000005.1 Protein Homology CDS 109775 110035 . + 0 ID=cds-WP_107366350.1;Parent=gene-RM615_RS08480;Dbxref=GenBank:WP_107366350.1;Name=WP_107366350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911203.1;locus_tag=RM615_RS08480;product=metal-sensitive transcriptional regulator;protein_id=WP_107366350.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 110038 110790 . + . ID=gene-RM615_RS08485;Name=RM615_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08485;old_locus_tag=RM615_08495 NZ_JAVRJW010000005.1 Protein Homology CDS 110038 110790 . + 0 ID=cds-WP_103159212.1;Parent=gene-RM615_RS08485;Dbxref=GenBank:WP_103159212.1;Name=WP_103159212.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501965.1;locus_tag=RM615_RS08485;product=sulfite exporter TauE/SafE family protein;protein_id=WP_103159212.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 110830 112146 . - . ID=gene-RM615_RS08490;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=RM615_RS08490;old_locus_tag=RM615_08500 NZ_JAVRJW010000005.1 Protein Homology CDS 110830 112146 . - 0 ID=cds-WP_311541084.1;Parent=gene-RM615_RS08490;Dbxref=GenBank:WP_311541084.1;Name=WP_311541084.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166861.1;locus_tag=RM615_RS08490;product=hypothiocyanous acid reductase MerA;protein_id=WP_311541084.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 112143 112571 . - . ID=gene-RM615_RS08495;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=RM615_RS08495;old_locus_tag=RM615_08505 NZ_JAVRJW010000005.1 Protein Homology CDS 112143 112571 . - 0 ID=cds-WP_311541085.1;Parent=gene-RM615_RS08495;Dbxref=GenBank:WP_311541085.1;Name=WP_311541085.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480215.1;locus_tag=RM615_RS08495;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_311541085.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 112877 113341 . - . ID=gene-RM615_RS08500;Name=RM615_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08500;old_locus_tag=RM615_08510 NZ_JAVRJW010000005.1 Protein Homology CDS 112877 113341 . - 0 ID=cds-WP_311541086.1;Parent=gene-RM615_RS08500;Dbxref=GenBank:WP_311541086.1;Name=WP_311541086.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.7;locus_tag=RM615_RS08500;product=AAA family ATPase;protein_id=WP_311541086.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 113354 114016 . - . ID=gene-RM615_RS08505;Name=RM615_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08505;old_locus_tag=RM615_08515 NZ_JAVRJW010000005.1 Protein Homology CDS 113354 114016 . - 0 ID=cds-WP_105965646.1;Parent=gene-RM615_RS08505;Dbxref=GenBank:WP_105965646.1;Name=WP_105965646.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274491.1;locus_tag=RM615_RS08505;product=ABC transporter ATP-binding protein;protein_id=WP_105965646.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 114029 115078 . - . ID=gene-RM615_RS08510;Name=RM615_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08510;old_locus_tag=RM615_08520 NZ_JAVRJW010000005.1 Protein Homology CDS 114029 115078 . - 0 ID=cds-WP_107366348.1;Parent=gene-RM615_RS08510;Dbxref=GenBank:WP_107366348.1;Name=WP_107366348.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=RM615_RS08510;product=ABC transporter permease;protein_id=WP_107366348.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 115297 116880 . + . ID=gene-RM615_RS08515;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=RM615_RS08515;old_locus_tag=RM615_08525 NZ_JAVRJW010000005.1 Protein Homology CDS 115297 116880 . + 0 ID=cds-WP_311541087.1;Parent=gene-RM615_RS08515;Dbxref=GenBank:WP_311541087.1;Name=WP_311541087.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000993.1;locus_tag=RM615_RS08515;product=fatty acid degradation protein FadX;protein_id=WP_311541087.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq pseudogene 117000 117965 . + . ID=gene-RM615_RS08520;Name=RM615_RS08520;end_range=117965,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS08520;old_locus_tag=RM615_08530;partial=true;pseudo=true NZ_JAVRJW010000005.1 Protein Homology CDS 117000 117965 . + 0 ID=cds-RM615_RS08520;Parent=gene-RM615_RS08520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016874;end_range=117965,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498795.1;locus_tag=RM615_RS08520;partial=true;product=class I adenylate-forming enzyme family protein;pseudo=true;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 118065 118955 . - . ID=gene-RM615_RS08525;Name=RM615_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08525;old_locus_tag=RM615_08535 NZ_JAVRJW010000005.1 Protein Homology CDS 118065 118955 . - 0 ID=cds-WP_311541088.1;Parent=gene-RM615_RS08525;Dbxref=GenBank:WP_311541088.1;Name=WP_311541088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020062552.1;locus_tag=RM615_RS08525;product=PhzF family protein;protein_id=WP_311541088.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 119520 120860 . - . ID=gene-RM615_RS08530;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=RM615_RS08530;old_locus_tag=RM615_08540 NZ_JAVRJW010000005.1 Protein Homology CDS 119520 120860 . - 0 ID=cds-WP_311541089.1;Parent=gene-RM615_RS08530;Dbxref=GenBank:WP_311541089.1;Name=WP_311541089.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=RM615_RS08530;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_311541089.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 120853 122358 . - . ID=gene-RM615_RS08535;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=RM615_RS08535;old_locus_tag=RM615_08545 NZ_JAVRJW010000005.1 Protein Homology CDS 120853 122358 . - 0 ID=cds-WP_311541090.1;Parent=gene-RM615_RS08535;Dbxref=GenBank:WP_311541090.1;Name=WP_311541090.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804521.1;locus_tag=RM615_RS08535;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_311541090.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 122374 124764 . - . ID=gene-RM615_RS08540;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=RM615_RS08540;old_locus_tag=RM615_08550 NZ_JAVRJW010000005.1 Protein Homology CDS 122374 124764 . - 0 ID=cds-WP_105992364.1;Parent=gene-RM615_RS08540;Dbxref=GenBank:WP_105992364.1;Name=WP_105992364.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=RM615_RS08540;product=accessory Sec system translocase SecA2;protein_id=WP_105992364.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 124754 125665 . - . ID=gene-RM615_RS08545;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=RM615_RS08545;old_locus_tag=RM615_08555 NZ_JAVRJW010000005.1 Protein Homology CDS 124754 125665 . - 0 ID=cds-WP_107366346.1;Parent=gene-RM615_RS08545;Dbxref=GenBank:WP_107366346.1;Name=WP_107366346.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: protein motif:HMM:TIGR03711.1;locus_tag=RM615_RS08545;product=accessory Sec system protein Asp3;protein_id=WP_107366346.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 125655 127214 . - . ID=gene-RM615_RS08550;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=RM615_RS08550;old_locus_tag=RM615_08560 NZ_JAVRJW010000005.1 Protein Homology CDS 125655 127214 . - 0 ID=cds-WP_105965636.1;Parent=gene-RM615_RS08550;Dbxref=GenBank:WP_105965636.1;Name=WP_105965636.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137453.1;locus_tag=RM615_RS08550;product=accessory Sec system protein Asp2;protein_id=WP_105965636.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 127204 128760 . - . ID=gene-RM615_RS08555;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=RM615_RS08555;old_locus_tag=RM615_08565 NZ_JAVRJW010000005.1 Protein Homology CDS 127204 128760 . - 0 ID=cds-WP_311541092.1;Parent=gene-RM615_RS08555;Dbxref=GenBank:WP_311541092.1;Name=WP_311541092.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425978.1;locus_tag=RM615_RS08555;product=accessory Sec system protein Asp1;protein_id=WP_311541092.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 128772 129995 . - . ID=gene-RM615_RS08560;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=RM615_RS08560;old_locus_tag=RM615_08570 NZ_JAVRJW010000005.1 Protein Homology CDS 128772 129995 . - 0 ID=cds-WP_311541093.1;Parent=gene-RM615_RS08560;Dbxref=GenBank:WP_311541093.1;Name=WP_311541093.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167352.1;locus_tag=RM615_RS08560;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_311541093.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 130106 130384 . - . ID=gene-RM615_RS11190;Name=RM615_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11190 NZ_JAVRJW010000005.1 Protein Homology CDS 130106 130384 . - 0 ID=cds-WP_165806231.1;Parent=gene-RM615_RS11190;Dbxref=GenBank:WP_165806231.1;Name=WP_165806231.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM615_RS11190;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_165806231.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq gene 130440 131198 . + . ID=gene-RM615_RS11195;Name=RM615_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11195 NZ_JAVRJW010000005.1 GeneMarkS-2+ CDS 130440 131198 . + 0 ID=cds-WP_375713005.1;Parent=gene-RM615_RS11195;Dbxref=GenBank:WP_375713005.1;Name=WP_375713005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS11195;product=hypothetical protein;protein_id=WP_375713005.1;transl_table=11 NZ_JAVRJW010000005.1 RefSeq pseudogene 131504 134047 . - . ID=gene-RM615_RS11200;Name=RM615_RS11200;end_range=134047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11200;partial=true;pseudo=true;start_range=.,131504 NZ_JAVRJW010000005.1 Protein Homology CDS 131504 134047 . - 0 ID=cds-RM615_RS11200;Parent=gene-RM615_RS11200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=134047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044537.1;locus_tag=RM615_RS11200;partial=true;product=hypothetical protein;pseudo=true;start_range=.,131504;transl_table=11 ##sequence-region NZ_JAVRJW010000006.1 1 118261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000006.1 RefSeq region 1 118261 . + . ID=NZ_JAVRJW010000006.1:1..118261;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000006.1 RefSeq gene 1 621 . + . ID=gene-RM615_RS08570;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM615_RS08570;old_locus_tag=RM615_08580;partial=true;start_range=.,1 NZ_JAVRJW010000006.1 Protein Homology CDS 1 621 . + 0 ID=cds-WP_311541096.1;Parent=gene-RM615_RS08570;Dbxref=GenBank:WP_311541096.1;Name=WP_311541096.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM615_RS08570;partial=true;product=phosphopentomutase;protein_id=WP_311541096.1;start_range=.,1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 679 1011 . - . ID=gene-RM615_RS08575;Name=RM615_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08575;old_locus_tag=RM615_08585 NZ_JAVRJW010000006.1 Protein Homology CDS 679 1011 . - 0 ID=cds-WP_037576102.1;Parent=gene-RM615_RS08575;Dbxref=GenBank:WP_037576102.1;Name=WP_037576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495128.1;locus_tag=RM615_RS08575;product=hypothetical protein;protein_id=WP_037576102.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 1191 1397 . + . ID=gene-RM615_RS08580;Name=RM615_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08580;old_locus_tag=RM615_08590 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 1191 1397 . + 0 ID=cds-WP_051604998.1;Parent=gene-RM615_RS08580;Dbxref=GenBank:WP_051604998.1;Name=WP_051604998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08580;product=hypothetical protein;protein_id=WP_051604998.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 1727 3088 . - . ID=gene-RM615_RS08585;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=RM615_RS08585;old_locus_tag=RM615_08595 NZ_JAVRJW010000006.1 Protein Homology CDS 1727 3088 . - 0 ID=cds-WP_103159691.1;Parent=gene-RM615_RS08585;Dbxref=GenBank:WP_103159691.1;Name=WP_103159691.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016913109.1;locus_tag=RM615_RS08585;product=glycerol-3-phosphate transporter;protein_id=WP_103159691.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 3452 4060 . - . ID=gene-RM615_RS08590;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=RM615_RS08590;old_locus_tag=RM615_08600 NZ_JAVRJW010000006.1 Protein Homology CDS 3452 4060 . - 0 ID=cds-WP_037576096.1;Parent=gene-RM615_RS08590;Dbxref=GenBank:WP_037576096.1;Name=WP_037576096.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438013.1;locus_tag=RM615_RS08590;product=adenylyl-sulfate kinase;protein_id=WP_037576096.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 4076 5251 . - . ID=gene-RM615_RS08595;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=RM615_RS08595;old_locus_tag=RM615_08605 NZ_JAVRJW010000006.1 Protein Homology CDS 4076 5251 . - 0 ID=cds-WP_105963309.1;Parent=gene-RM615_RS08595;Dbxref=GenBank:WP_105963309.1;Name=WP_105963309.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438012.1;locus_tag=RM615_RS08595;product=sulfate adenylyltransferase;protein_id=WP_105963309.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 5266 6162 . - . ID=gene-RM615_RS08600;Name=RM615_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08600;old_locus_tag=RM615_08610 NZ_JAVRJW010000006.1 Protein Homology CDS 5266 6162 . - 0 ID=cds-WP_105965689.1;Parent=gene-RM615_RS08600;Dbxref=GenBank:WP_105965689.1;Name=WP_105965689.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303994.1;locus_tag=RM615_RS08600;product=sulfite exporter TauE/SafE family protein;protein_id=WP_105965689.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 6200 6967 . - . ID=gene-RM615_RS08605;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM615_RS08605;old_locus_tag=RM615_08615 NZ_JAVRJW010000006.1 Protein Homology CDS 6200 6967 . - 0 ID=cds-WP_037576086.1;Parent=gene-RM615_RS08605;Dbxref=GenBank:WP_037576086.1;Name=WP_037576086.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449255.1;locus_tag=RM615_RS08605;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_037576086.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 7000 8730 . - . ID=gene-RM615_RS08610;Name=RM615_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08610;old_locus_tag=RM615_08620 NZ_JAVRJW010000006.1 Protein Homology CDS 7000 8730 . - 0 ID=cds-WP_311539447.1;Parent=gene-RM615_RS08610;Dbxref=GenBank:WP_311539447.1;Name=WP_311539447.1;Ontology_term=GO:0008652,GO:0004783,GO:0051536;gbkey=CDS;go_function=sulfite reductase (NADPH) activity|0004783||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835188.1;locus_tag=RM615_RS08610;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=WP_311539447.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 8755 10623 . - . ID=gene-RM615_RS08615;Name=RM615_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08615;old_locus_tag=RM615_08625 NZ_JAVRJW010000006.1 Protein Homology CDS 8755 10623 . - 0 ID=cds-WP_105966068.1;Parent=gene-RM615_RS08615;Dbxref=GenBank:WP_105966068.1;Name=WP_105966068.1;Ontology_term=GO:0006790,GO:0019344,GO:0004783,GO:0010181,GO:0050660,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfur compound metabolic process|0006790||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=RM615_RS08615;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_105966068.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 10702 11424 . - . ID=gene-RM615_RS08620;Name=RM615_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08620;old_locus_tag=RM615_08630 NZ_JAVRJW010000006.1 Protein Homology CDS 10702 11424 . - 0 ID=cds-WP_107372074.1;Parent=gene-RM615_RS08620;Dbxref=GenBank:WP_107372074.1;Name=WP_107372074.1;Ontology_term=GO:0000103,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000080.1;locus_tag=RM615_RS08620;product=phosphoadenylyl-sulfate reductase;protein_id=WP_107372074.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 11780 12748 . + . ID=gene-RM615_RS08625;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=RM615_RS08625;old_locus_tag=RM615_08635 NZ_JAVRJW010000006.1 Protein Homology CDS 11780 12748 . + 0 ID=cds-WP_037576070.1;Parent=gene-RM615_RS08625;Dbxref=GenBank:WP_037576070.1;Name=WP_037576070.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433253.1;locus_tag=RM615_RS08625;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_037576070.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 12762 13337 . + . ID=gene-RM615_RS08630;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=RM615_RS08630;old_locus_tag=RM615_08640 NZ_JAVRJW010000006.1 Protein Homology CDS 12762 13337 . + 0 ID=cds-WP_311539448.1;Parent=gene-RM615_RS08630;Dbxref=GenBank:WP_311539448.1;Name=WP_311539448.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508379.1;locus_tag=RM615_RS08630;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_311539448.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 13339 13704 . + . ID=gene-RM615_RS08635;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=RM615_RS08635;old_locus_tag=RM615_08645 NZ_JAVRJW010000006.1 Protein Homology CDS 13339 13704 . + 0 ID=cds-WP_103159683.1;Parent=gene-RM615_RS08635;Dbxref=GenBank:WP_103159683.1;Name=WP_103159683.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612912.1;locus_tag=RM615_RS08635;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_103159683.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 13938 15179 . + . ID=gene-RM615_RS08640;Name=RM615_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08640;old_locus_tag=RM615_08650 NZ_JAVRJW010000006.1 Protein Homology CDS 13938 15179 . + 0 ID=cds-WP_311539449.1;Parent=gene-RM615_RS08640;Dbxref=GenBank:WP_311539449.1;Name=WP_311539449.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274967.1;locus_tag=RM615_RS08640;product=aminoacyltransferase;protein_id=WP_311539449.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 15312 15662 . - . ID=gene-RM615_RS08645;Name=RM615_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08645;old_locus_tag=RM615_08655 NZ_JAVRJW010000006.1 Protein Homology CDS 15312 15662 . - 0 ID=cds-WP_037576054.1;Parent=gene-RM615_RS08645;Dbxref=GenBank:WP_037576054.1;Name=WP_037576054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426058.1;locus_tag=RM615_RS08645;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_037576054.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 15912 17291 . + . ID=gene-RM615_RS08650;Name=RM615_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08650;old_locus_tag=RM615_08660 NZ_JAVRJW010000006.1 Protein Homology CDS 15912 17291 . + 0 ID=cds-WP_103159681.1;Parent=gene-RM615_RS08650;Dbxref=GenBank:WP_103159681.1;Name=WP_103159681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=RM615_RS08650;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_103159681.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 17319 17615 . + . ID=gene-RM615_RS08655;Name=RM615_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08655;old_locus_tag=RM615_08665 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 17319 17615 . + 0 ID=cds-WP_037576050.1;Parent=gene-RM615_RS08655;Dbxref=GenBank:WP_037576050.1;Name=WP_037576050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08655;product=hypothetical protein;protein_id=WP_037576050.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 17968 18924 . + . ID=gene-RM615_RS08660;Name=RM615_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08660;old_locus_tag=RM615_08670 NZ_JAVRJW010000006.1 Protein Homology CDS 17968 18924 . + 0 ID=cds-WP_103159679.1;Parent=gene-RM615_RS08660;Dbxref=GenBank:WP_103159679.1;Name=WP_103159679.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=RM615_RS08660;product=alpha/beta hydrolase;protein_id=WP_103159679.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 18956 19714 . + . ID=gene-RM615_RS08665;Name=RM615_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08665;old_locus_tag=RM615_08675 NZ_JAVRJW010000006.1 Protein Homology CDS 18956 19714 . + 0 ID=cds-WP_051604997.1;Parent=gene-RM615_RS08665;Dbxref=GenBank:WP_051604997.1;Name=WP_051604997.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.7;locus_tag=RM615_RS08665;product=MerR family transcriptional regulator;protein_id=WP_051604997.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 19881 21854 . + . ID=gene-RM615_RS08670;Name=RM615_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08670;old_locus_tag=RM615_08680 NZ_JAVRJW010000006.1 Protein Homology CDS 19881 21854 . + 0 ID=cds-WP_105996952.1;Parent=gene-RM615_RS08670;Dbxref=GenBank:WP_105996952.1;Name=WP_105996952.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480244.1;locus_tag=RM615_RS08670;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_105996952.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 21922 23253 . - . ID=gene-RM615_RS08675;Name=RM615_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08675;old_locus_tag=RM615_08685 NZ_JAVRJW010000006.1 Protein Homology CDS 21922 23253 . - 0 ID=cds-WP_241954928.1;Parent=gene-RM615_RS08675;Dbxref=GenBank:WP_241954928.1;Name=WP_241954928.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: protein motif:HMM:NF013954.7;locus_tag=RM615_RS08675;product=glucosaminidase domain-containing protein;protein_id=WP_241954928.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 23448 25196 . + . ID=gene-RM615_RS08680;Name=RM615_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08680;old_locus_tag=RM615_08690 NZ_JAVRJW010000006.1 Protein Homology CDS 23448 25196 . + 0 ID=cds-WP_107360626.1;Parent=gene-RM615_RS08680;Dbxref=GenBank:WP_107360626.1;Name=WP_107360626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM615_RS08680;product=YhgE/Pip domain-containing protein;protein_id=WP_107360626.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 25249 25596 . + . ID=gene-RM615_RS08685;Name=RM615_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08685;old_locus_tag=RM615_08695 NZ_JAVRJW010000006.1 Protein Homology CDS 25249 25596 . + 0 ID=cds-WP_037576029.1;Parent=gene-RM615_RS08685;Dbxref=GenBank:WP_037576029.1;Name=WP_037576029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016839079.1;locus_tag=RM615_RS08685;product=DUF2200 domain-containing protein;protein_id=WP_037576029.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 25720 26244 . - . ID=gene-RM615_RS08690;Name=RM615_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08690;old_locus_tag=RM615_08700 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 25720 26244 . - 0 ID=cds-WP_105965693.1;Parent=gene-RM615_RS08690;Dbxref=GenBank:WP_105965693.1;Name=WP_105965693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08690;product=hypothetical protein;protein_id=WP_105965693.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 26455 26673 . - . ID=gene-RM615_RS08695;Name=RM615_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08695;old_locus_tag=RM615_08705 NZ_JAVRJW010000006.1 Protein Homology CDS 26455 26673 . - 0 ID=cds-WP_037576023.1;Parent=gene-RM615_RS08695;Dbxref=GenBank:WP_037576023.1;Name=WP_037576023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018554.7;locus_tag=RM615_RS08695;product=YozE family protein;protein_id=WP_037576023.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 26893 27615 . + . ID=gene-RM615_RS08700;Name=RM615_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08700;old_locus_tag=RM615_08710 NZ_JAVRJW010000006.1 Protein Homology CDS 26893 27615 . + 0 ID=cds-WP_311541097.1;Parent=gene-RM615_RS08700;Dbxref=GenBank:WP_311541097.1;Name=WP_311541097.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501364.1;locus_tag=RM615_RS08700;product=epoxyqueuosine reductase QueH;protein_id=WP_311541097.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 27751 29238 . + . ID=gene-RM615_RS08705;Name=RM615_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08705;old_locus_tag=RM615_08715 NZ_JAVRJW010000006.1 Protein Homology CDS 27751 29238 . + 0 ID=cds-WP_103159674.1;Parent=gene-RM615_RS08705;Dbxref=GenBank:WP_103159674.1;Name=WP_103159674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=RM615_RS08705;product=ABC transporter substrate-binding protein;protein_id=WP_103159674.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 29228 30214 . + . ID=gene-RM615_RS08710;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=RM615_RS08710;old_locus_tag=RM615_08720 NZ_JAVRJW010000006.1 Protein Homology CDS 29228 30214 . + 0 ID=cds-WP_037576018.1;Parent=gene-RM615_RS08710;Dbxref=GenBank:WP_037576018.1;Name=WP_037576018.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636982.1;locus_tag=RM615_RS08710;product=nickel ABC transporter permease;protein_id=WP_037576018.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 30211 31014 . + . ID=gene-RM615_RS08715;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=RM615_RS08715;old_locus_tag=RM615_08725 NZ_JAVRJW010000006.1 Protein Homology CDS 30211 31014 . + 0 ID=cds-WP_051604994.1;Parent=gene-RM615_RS08715;Dbxref=GenBank:WP_051604994.1;Name=WP_051604994.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302255.1;locus_tag=RM615_RS08715;product=nickel transporter permease;protein_id=WP_051604994.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 31016 31786 . + . ID=gene-RM615_RS08720;Name=RM615_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08720;old_locus_tag=RM615_08730 NZ_JAVRJW010000006.1 Protein Homology CDS 31016 31786 . + 0 ID=cds-WP_311541098.1;Parent=gene-RM615_RS08720;Dbxref=GenBank:WP_311541098.1;Name=WP_311541098.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=RM615_RS08720;product=ATP-binding cassette domain-containing protein;protein_id=WP_311541098.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 31783 32472 . + . ID=gene-RM615_RS08725;Name=RM615_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08725;old_locus_tag=RM615_08735 NZ_JAVRJW010000006.1 Protein Homology CDS 31783 32472 . + 0 ID=cds-WP_311541100.1;Parent=gene-RM615_RS08725;Dbxref=GenBank:WP_311541100.1;Name=WP_311541100.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM615_RS08725;product=ABC transporter ATP-binding protein;protein_id=WP_311541100.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 32585 34750 . - . ID=gene-RM615_RS08730;Name=RM615_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08730;old_locus_tag=RM615_08740 NZ_JAVRJW010000006.1 Protein Homology CDS 32585 34750 . - 0 ID=cds-WP_107370475.1;Parent=gene-RM615_RS08730;Dbxref=GenBank:WP_107370475.1;Name=WP_107370475.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447216.1;locus_tag=RM615_RS08730;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_107370475.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 34947 36449 . + . ID=gene-RM615_RS08735;Name=RM615_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08735;old_locus_tag=RM615_08745 NZ_JAVRJW010000006.1 Protein Homology CDS 34947 36449 . + 0 ID=cds-WP_182470783.1;Parent=gene-RM615_RS08735;Dbxref=GenBank:WP_182470783.1;Name=WP_182470783.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=RM615_RS08735;product=glycosyltransferase;protein_id=WP_182470783.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 36747 38618 . + . ID=gene-RM615_RS08740;Name=RM615_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08740;old_locus_tag=RM615_08750 NZ_JAVRJW010000006.1 Protein Homology CDS 36747 38618 . + 0 ID=cds-WP_157946273.1;Parent=gene-RM615_RS08740;Dbxref=GenBank:WP_157946273.1;Name=WP_157946273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=RM615_RS08740;product=DUF5776 domain-containing protein;protein_id=WP_157946273.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 38637 40118 . + . ID=gene-RM615_RS08745;Name=RM615_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08745;old_locus_tag=RM615_08755 NZ_JAVRJW010000006.1 Protein Homology CDS 38637 40118 . + 0 ID=cds-WP_107370476.1;Parent=gene-RM615_RS08745;Dbxref=GenBank:WP_107370476.1;Name=WP_107370476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.6;locus_tag=RM615_RS08745;product=DUF6056 family protein;protein_id=WP_107370476.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 40252 41721 . - . ID=gene-RM615_RS08750;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=RM615_RS08750;old_locus_tag=RM615_08760 NZ_JAVRJW010000006.1 Protein Homology CDS 40252 41721 . - 0 ID=cds-WP_107370477.1;Parent=gene-RM615_RS08750;Dbxref=GenBank:WP_107370477.1;Name=WP_107370477.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471199.1;locus_tag=RM615_RS08750;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_107370477.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 42105 44228 . + . ID=gene-RM615_RS08755;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=RM615_RS08755;old_locus_tag=RM615_08765 NZ_JAVRJW010000006.1 Protein Homology CDS 42105 44228 . + 0 ID=cds-WP_107370478.1;Parent=gene-RM615_RS08755;Dbxref=GenBank:WP_107370478.1;Name=WP_107370478.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: protein motif:HMM:NF047351.1;locus_tag=RM615_RS08755;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_107370478.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 44199 44438 . - . ID=gene-RM615_RS11205;Name=RM615_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11205 NZ_JAVRJW010000006.1 Protein Homology CDS 44199 44438 . - 0 ID=cds-WP_375712407.1;Parent=gene-RM615_RS11205;Dbxref=GenBank:WP_375712407.1;Name=WP_375712407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.7;locus_tag=RM615_RS11205;product=transposase;protein_id=WP_375712407.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq pseudogene 44491 44872 . + . ID=gene-RM615_RS08765;Name=RM615_RS08765;end_range=44872,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS08765;old_locus_tag=RM615_08775;partial=true;pseudo=true;start_range=.,44491 NZ_JAVRJW010000006.1 Protein Homology CDS 44491 44872 . + 0 ID=cds-RM615_RS08765;Parent=gene-RM615_RS08765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=44872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813127.1;locus_tag=RM615_RS08765;partial=true;product=DUF536 domain-containing protein;pseudo=true;start_range=.,44491;transl_table=11 NZ_JAVRJW010000006.1 RefSeq pseudogene 44985 45495 . - . ID=gene-RM615_RS08770;Name=RM615_RS08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS08770;old_locus_tag=RM615_08780;pseudo=true NZ_JAVRJW010000006.1 Protein Homology CDS 44985 45495 . - 0 ID=cds-RM615_RS08770;Parent=gene-RM615_RS08770;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690624.1;locus_tag=RM615_RS08770;product=recombinase family protein;pseudo=true;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 45854 46519 . - . ID=gene-RM615_RS08775;Name=RM615_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08775;old_locus_tag=RM615_08785 NZ_JAVRJW010000006.1 Protein Homology CDS 45854 46519 . - 0 ID=cds-WP_107370479.1;Parent=gene-RM615_RS08775;Dbxref=GenBank:WP_107370479.1;Name=WP_107370479.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463364.1;locus_tag=RM615_RS08775;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_107370479.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 46676 47539 . + . ID=gene-RM615_RS08780;Name=RM615_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08780;old_locus_tag=RM615_08790 NZ_JAVRJW010000006.1 Protein Homology CDS 46676 47539 . + 0 ID=cds-WP_105965701.1;Parent=gene-RM615_RS08780;Dbxref=GenBank:WP_105965701.1;Name=WP_105965701.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=RM615_RS08780;product=fructosamine kinase family protein;protein_id=WP_105965701.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 47563 47937 . + . ID=gene-RM615_RS08785;Name=RM615_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08785;old_locus_tag=RM615_08795 NZ_JAVRJW010000006.1 Protein Homology CDS 47563 47937 . + 0 ID=cds-WP_107366627.1;Parent=gene-RM615_RS08785;Dbxref=GenBank:WP_107366627.1;Name=WP_107366627.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019468.7;locus_tag=RM615_RS08785;product=DUF1648 domain-containing protein;protein_id=WP_107366627.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 48031 48630 . - . ID=gene-RM615_RS08790;Name=RM615_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08790;old_locus_tag=RM615_08800 NZ_JAVRJW010000006.1 Protein Homology CDS 48031 48630 . - 0 ID=cds-WP_107363975.1;Parent=gene-RM615_RS08790;Dbxref=GenBank:WP_107363975.1;Name=WP_107363975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016764.7;locus_tag=RM615_RS08790;product=YIP1 family protein;protein_id=WP_107363975.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 48890 49930 . + . ID=gene-RM615_RS08795;Name=RM615_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08795;old_locus_tag=RM615_08805 NZ_JAVRJW010000006.1 Protein Homology CDS 48890 49930 . + 0 ID=cds-WP_037576116.1;Parent=gene-RM615_RS08795;Dbxref=GenBank:WP_037576116.1;Name=WP_037576116.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451536.1;locus_tag=RM615_RS08795;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_037576116.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 49927 50613 . + . ID=gene-RM615_RS08800;Name=RM615_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08800;old_locus_tag=RM615_08810 NZ_JAVRJW010000006.1 Protein Homology CDS 49927 50613 . + 0 ID=cds-WP_037575988.1;Parent=gene-RM615_RS08800;Dbxref=GenBank:WP_037575988.1;Name=WP_037575988.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466413.1;locus_tag=RM615_RS08800;product=ABC transporter ATP-binding protein;protein_id=WP_037575988.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 50606 51793 . + . ID=gene-RM615_RS08805;Name=RM615_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08805;old_locus_tag=RM615_08815 NZ_JAVRJW010000006.1 Protein Homology CDS 50606 51793 . + 0 ID=cds-WP_105965703.1;Parent=gene-RM615_RS08805;Dbxref=GenBank:WP_105965703.1;Name=WP_105965703.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=RM615_RS08805;product=ABC transporter permease;protein_id=WP_105965703.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 52184 52420 . + . ID=gene-RM615_RS08810;Name=RM615_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08810;old_locus_tag=RM615_08820 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 52184 52420 . + 0 ID=cds-WP_037575984.1;Parent=gene-RM615_RS08810;Dbxref=GenBank:WP_037575984.1;Name=WP_037575984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08810;product=hypothetical protein;protein_id=WP_037575984.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 52669 53877 . + . ID=gene-RM615_RS08815;Name=RM615_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08815;old_locus_tag=RM615_08825 NZ_JAVRJW010000006.1 Protein Homology CDS 52669 53877 . + 0 ID=cds-WP_375712610.1;Parent=gene-RM615_RS08815;Dbxref=GenBank:WP_375712610.1;Name=WP_375712610.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467283.1;locus_tag=RM615_RS08815;product=serine hydrolase domain-containing protein;protein_id=WP_375712610.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 54033 54167 . + . ID=gene-RM615_RS08820;Name=RM615_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08820;old_locus_tag=RM615_08830 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 54033 54167 . + 0 ID=cds-WP_255201684.1;Parent=gene-RM615_RS08820;Dbxref=GenBank:WP_255201684.1;Name=WP_255201684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08820;product=hypothetical protein;protein_id=WP_255201684.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 54194 54862 . + . ID=gene-RM615_RS08825;Name=RM615_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08825;old_locus_tag=RM615_08835 NZ_JAVRJW010000006.1 Protein Homology CDS 54194 54862 . + 0 ID=cds-WP_037575983.1;Parent=gene-RM615_RS08825;Dbxref=GenBank:WP_037575983.1;Name=WP_037575983.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.7;locus_tag=RM615_RS08825;product=response regulator transcription factor;protein_id=WP_037575983.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 54859 56010 . + . ID=gene-RM615_RS08830;Name=RM615_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08830;old_locus_tag=RM615_08840 NZ_JAVRJW010000006.1 Protein Homology CDS 54859 56010 . + 0 ID=cds-WP_105966057.1;Parent=gene-RM615_RS08830;Dbxref=GenBank:WP_105966057.1;Name=WP_105966057.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636325.1;locus_tag=RM615_RS08830;product=sensor histidine kinase;protein_id=WP_105966057.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 56079 56495 . + . ID=gene-RM615_RS08835;Name=RM615_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08835;old_locus_tag=RM615_08845 NZ_JAVRJW010000006.1 Protein Homology CDS 56079 56495 . + 0 ID=cds-WP_037575979.1;Parent=gene-RM615_RS08835;Dbxref=GenBank:WP_037575979.1;Name=WP_037575979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931400.1;locus_tag=RM615_RS08835;product=DUF2231 domain-containing protein;protein_id=WP_037575979.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 56510 57445 . + . ID=gene-RM615_RS08840;Name=RM615_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08840;old_locus_tag=RM615_08850 NZ_JAVRJW010000006.1 Protein Homology CDS 56510 57445 . + 0 ID=cds-WP_037575977.1;Parent=gene-RM615_RS08840;Dbxref=GenBank:WP_037575977.1;Name=WP_037575977.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=RM615_RS08840;product=cation diffusion facilitator family transporter;protein_id=WP_037575977.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 57556 58233 . + . ID=gene-RM615_RS08845;Name=RM615_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08845;old_locus_tag=RM615_08855 NZ_JAVRJW010000006.1 Protein Homology CDS 57556 58233 . + 0 ID=cds-WP_311541101.1;Parent=gene-RM615_RS08845;Dbxref=GenBank:WP_311541101.1;Name=WP_311541101.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712443.1;locus_tag=RM615_RS08845;product=DUF554 domain-containing protein;protein_id=WP_311541101.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 58403 59317 . - . ID=gene-RM615_RS08850;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=RM615_RS08850;old_locus_tag=RM615_08860 NZ_JAVRJW010000006.1 Protein Homology CDS 58403 59317 . - 0 ID=cds-WP_232160276.1;Parent=gene-RM615_RS08850;Dbxref=GenBank:WP_232160276.1;Name=WP_232160276.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426091.1;locus_tag=RM615_RS08850;product=urea transporter;protein_id=WP_232160276.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 59551 59853 . + . ID=gene-RM615_RS08855;Name=RM615_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08855;old_locus_tag=RM615_08865 NZ_JAVRJW010000006.1 Protein Homology CDS 59551 59853 . + 0 ID=cds-WP_037575964.1;Parent=gene-RM615_RS08855;Dbxref=GenBank:WP_037575964.1;Name=WP_037575964.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=RM615_RS08855;product=urease subunit gamma;protein_id=WP_037575964.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 59865 60221 . + . ID=gene-RM615_RS08860;Name=RM615_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08860;old_locus_tag=RM615_08870 NZ_JAVRJW010000006.1 Protein Homology CDS 59865 60221 . + 0 ID=cds-WP_037575963.1;Parent=gene-RM615_RS08860;Dbxref=GenBank:WP_037575963.1;Name=WP_037575963.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=RM615_RS08860;product=urease subunit beta;protein_id=WP_037575963.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 60218 61933 . + . ID=gene-RM615_RS08865;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=RM615_RS08865;old_locus_tag=RM615_08875 NZ_JAVRJW010000006.1 Protein Homology CDS 60218 61933 . + 0 ID=cds-WP_037575960.1;Parent=gene-RM615_RS08865;Dbxref=GenBank:WP_037575960.1;Name=WP_037575960.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=RM615_RS08865;product=urease subunit alpha;protein_id=WP_037575960.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 62221 62766 . + . ID=gene-RM615_RS08870;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=RM615_RS08870;old_locus_tag=RM615_08880 NZ_JAVRJW010000006.1 Protein Homology CDS 62221 62766 . + 0 ID=cds-WP_037575957.1;Parent=gene-RM615_RS08870;Dbxref=GenBank:WP_037575957.1;Name=WP_037575957.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=RM615_RS08870;product=dCTP deaminase;protein_id=WP_037575957.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 62766 63665 . + . ID=gene-RM615_RS08875;Name=RM615_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08875;old_locus_tag=RM615_08885 NZ_JAVRJW010000006.1 Protein Homology CDS 62766 63665 . + 0 ID=cds-WP_037575949.1;Parent=gene-RM615_RS08875;Dbxref=GenBank:WP_037575949.1;Name=WP_037575949.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=RM615_RS08875;product=CobW family GTP-binding protein;protein_id=WP_037575949.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 64012 64434 . + . ID=gene-RM615_RS08880;Name=RM615_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08880;old_locus_tag=RM615_08890 NZ_JAVRJW010000006.1 Protein Homology CDS 64012 64434 . + 0 ID=cds-WP_037575946.1;Parent=gene-RM615_RS08880;Dbxref=GenBank:WP_037575946.1;Name=WP_037575946.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=RM615_RS08880;product=universal stress protein;protein_id=WP_037575946.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 64632 65942 . + . ID=gene-RM615_RS08885;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=RM615_RS08885;old_locus_tag=RM615_08895 NZ_JAVRJW010000006.1 Protein Homology CDS 64632 65942 . + 0 ID=cds-WP_103159505.1;Parent=gene-RM615_RS08885;Dbxref=GenBank:WP_103159505.1;Name=WP_103159505.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829028.1;locus_tag=RM615_RS08885;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_103159505.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 65984 66337 . - . ID=gene-RM615_RS08890;Name=RM615_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08890;old_locus_tag=RM615_08900 NZ_JAVRJW010000006.1 Protein Homology CDS 65984 66337 . - 0 ID=cds-WP_103159504.1;Parent=gene-RM615_RS08890;Dbxref=GenBank:WP_103159504.1;Name=WP_103159504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482245.1;locus_tag=RM615_RS08890;product=DUF488 domain-containing protein;protein_id=WP_103159504.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 66528 66707 . + . ID=gene-RM615_RS08895;Name=RM615_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08895;old_locus_tag=RM615_08905 NZ_JAVRJW010000006.1 Protein Homology CDS 66528 66707 . + 0 ID=cds-WP_037575940.1;Parent=gene-RM615_RS08895;Dbxref=GenBank:WP_037575940.1;Name=WP_037575940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=RM615_RS08895;product=hypothetical protein;protein_id=WP_037575940.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 67174 67713 . + . ID=gene-RM615_RS08900;Name=RM615_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08900;old_locus_tag=RM615_08910 NZ_JAVRJW010000006.1 Protein Homology CDS 67174 67713 . + 0 ID=cds-WP_037575938.1;Parent=gene-RM615_RS08900;Dbxref=GenBank:WP_037575938.1;Name=WP_037575938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF058244.1;locus_tag=RM615_RS08900;product=SA1002 family membrane protein;protein_id=WP_037575938.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 67855 68823 . + . ID=gene-RM615_RS08905;Name=RM615_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08905;old_locus_tag=RM615_08915 NZ_JAVRJW010000006.1 Protein Homology CDS 67855 68823 . + 0 ID=cds-WP_037575933.1;Parent=gene-RM615_RS08905;Dbxref=GenBank:WP_037575933.1;Name=WP_037575933.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426110.1;locus_tag=RM615_RS08905;product=ABC transporter permease;protein_id=WP_037575933.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 68813 69772 . + . ID=gene-RM615_RS08910;Name=RM615_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08910;old_locus_tag=RM615_08920 NZ_JAVRJW010000006.1 Protein Homology CDS 68813 69772 . + 0 ID=cds-WP_105963343.1;Parent=gene-RM615_RS08910;Dbxref=GenBank:WP_105963343.1;Name=WP_105963343.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426111.1;locus_tag=RM615_RS08910;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_105963343.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 69769 70572 . + . ID=gene-RM615_RS08915;Name=RM615_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08915;old_locus_tag=RM615_08925 NZ_JAVRJW010000006.1 Protein Homology CDS 69769 70572 . + 0 ID=cds-WP_105963344.1;Parent=gene-RM615_RS08915;Dbxref=GenBank:WP_105963344.1;Name=WP_105963344.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449075.1;locus_tag=RM615_RS08915;product=iron ABC transporter ATP-binding protein;protein_id=WP_105963344.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 70588 71622 . + . ID=gene-RM615_RS08920;Name=RM615_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08920;old_locus_tag=RM615_08930 NZ_JAVRJW010000006.1 Protein Homology CDS 70588 71622 . + 0 ID=cds-WP_037575928.1;Parent=gene-RM615_RS08920;Dbxref=GenBank:WP_037575928.1;Name=WP_037575928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426114.1;locus_tag=RM615_RS08920;product=ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD;protein_id=WP_037575928.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq pseudogene 71814 73010 . - . ID=gene-RM615_RS08925;Name=lip;end_range=73010,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=RM615_RS08925;old_locus_tag=RM615_08935;partial=true;pseudo=true NZ_JAVRJW010000006.1 Protein Homology CDS 71814 73010 . - 0 ID=cds-RM615_RS08925;Parent=gene-RM615_RS08925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=73010,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364631.1;locus_tag=RM615_RS08925;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 73552 73983 . - . ID=gene-RM615_RS08930;Name=RM615_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08930;old_locus_tag=RM615_08940 NZ_JAVRJW010000006.1 Protein Homology CDS 73552 73983 . - 0 ID=cds-WP_037575924.1;Parent=gene-RM615_RS08930;Dbxref=GenBank:WP_037575924.1;Name=WP_037575924.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289218.1;locus_tag=RM615_RS08930;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575924.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 74120 74740 . + . ID=gene-RM615_RS08935;Name=RM615_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08935;old_locus_tag=RM615_08945 NZ_JAVRJW010000006.1 Protein Homology CDS 74120 74740 . + 0 ID=cds-WP_105963345.1;Parent=gene-RM615_RS08935;Dbxref=GenBank:WP_105963345.1;Name=WP_105963345.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449496.1;locus_tag=RM615_RS08935;product=nitroreductase family protein;protein_id=WP_105963345.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 74844 75557 . + . ID=gene-RM615_RS08940;Name=RM615_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08940;old_locus_tag=RM615_08950 NZ_JAVRJW010000006.1 Protein Homology CDS 74844 75557 . + 0 ID=cds-WP_037575919.1;Parent=gene-RM615_RS08940;Dbxref=GenBank:WP_037575919.1;Name=WP_037575919.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912759.1;locus_tag=RM615_RS08940;product=GTP pyrophosphokinase;protein_id=WP_037575919.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 75595 76164 . - . ID=gene-RM615_RS08945;Name=RM615_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08945;old_locus_tag=RM615_08955 NZ_JAVRJW010000006.1 Protein Homology CDS 75595 76164 . - 0 ID=cds-WP_051604991.1;Parent=gene-RM615_RS08945;Dbxref=GenBank:WP_051604991.1;Name=WP_051604991.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382209.1;locus_tag=RM615_RS08945;product=M23 family metallopeptidase;protein_id=WP_051604991.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 76645 77043 . - . ID=gene-RM615_RS08950;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=RM615_RS08950;old_locus_tag=RM615_08960 NZ_JAVRJW010000006.1 Protein Homology CDS 76645 77043 . - 0 ID=cds-WP_037575917.1;Parent=gene-RM615_RS08950;Dbxref=GenBank:WP_037575917.1;Name=WP_037575917.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM615_RS08950;product=arsenate reductase (thioredoxin);protein_id=WP_037575917.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 77061 78350 . - . ID=gene-RM615_RS08955;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=RM615_RS08955;old_locus_tag=RM615_08965 NZ_JAVRJW010000006.1 Protein Homology CDS 77061 78350 . - 0 ID=cds-WP_311541102.1;Parent=gene-RM615_RS08955;Dbxref=GenBank:WP_311541102.1;Name=WP_311541102.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=RM615_RS08955;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_311541102.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 78347 78664 . - . ID=gene-RM615_RS08960;Name=RM615_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08960;old_locus_tag=RM615_08970 NZ_JAVRJW010000006.1 Protein Homology CDS 78347 78664 . - 0 ID=cds-WP_037575913.1;Parent=gene-RM615_RS08960;Dbxref=GenBank:WP_037575913.1;Name=WP_037575913.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120606.1;locus_tag=RM615_RS08960;product=ArsR/SmtB family transcription factor;protein_id=WP_037575913.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 79157 80017 . - . ID=gene-RM615_RS08965;Name=RM615_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08965;old_locus_tag=RM615_08975 NZ_JAVRJW010000006.1 Protein Homology CDS 79157 80017 . - 0 ID=cds-WP_311541103.1;Parent=gene-RM615_RS08965;Dbxref=GenBank:WP_311541103.1;Name=WP_311541103.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725232.1;locus_tag=RM615_RS08965;product=CHAP domain-containing protein;protein_id=WP_311541103.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 80677 81372 . - . ID=gene-RM615_RS08970;Name=RM615_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08970;old_locus_tag=RM615_08980 NZ_JAVRJW010000006.1 Protein Homology CDS 80677 81372 . - 0 ID=cds-WP_105963346.1;Parent=gene-RM615_RS08970;Dbxref=GenBank:WP_105963346.1;Name=WP_105963346.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499548.1;locus_tag=RM615_RS08970;product=transglycosylase family protein;protein_id=WP_105963346.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 81794 83212 . + . ID=gene-RM615_RS08975;Name=RM615_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08975;old_locus_tag=RM615_08985 NZ_JAVRJW010000006.1 Protein Homology CDS 81794 83212 . + 0 ID=cds-WP_037575901.1;Parent=gene-RM615_RS08975;Dbxref=GenBank:WP_037575901.1;Name=WP_037575901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=RM615_RS08975;product=phosphate--AMP phosphotransferase;protein_id=WP_037575901.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 83324 84205 . + . ID=gene-RM615_RS08980;Name=RM615_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08980;old_locus_tag=RM615_08990 NZ_JAVRJW010000006.1 Protein Homology CDS 83324 84205 . + 0 ID=cds-WP_037575900.1;Parent=gene-RM615_RS08980;Dbxref=GenBank:WP_037575900.1;Name=WP_037575900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=RM615_RS08980;product=alpha/beta fold hydrolase;protein_id=WP_037575900.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 84264 84899 . + . ID=gene-RM615_RS08985;Name=RM615_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08985;old_locus_tag=RM615_08995 NZ_JAVRJW010000006.1 Protein Homology CDS 84264 84899 . + 0 ID=cds-WP_037575898.1;Parent=gene-RM615_RS08985;Dbxref=GenBank:WP_037575898.1;Name=WP_037575898.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF016115.7;locus_tag=RM615_RS08985;product=cyclase family protein;protein_id=WP_037575898.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 84941 86155 . + . ID=gene-RM615_RS08990;Name=RM615_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08990;old_locus_tag=RM615_09000 NZ_JAVRJW010000006.1 Protein Homology CDS 84941 86155 . + 0 ID=cds-WP_105963350.1;Parent=gene-RM615_RS08990;Dbxref=GenBank:WP_105963350.1;Name=WP_105963350.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510051.1;locus_tag=RM615_RS08990;product=Bcr/CflA family efflux MFS transporter;protein_id=WP_105963350.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 86236 86442 . - . ID=gene-RM615_RS08995;Name=RM615_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS08995;old_locus_tag=RM615_09005 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 86236 86442 . - 0 ID=cds-WP_037575894.1;Parent=gene-RM615_RS08995;Dbxref=GenBank:WP_037575894.1;Name=WP_037575894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS08995;product=hypothetical protein;protein_id=WP_037575894.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 86667 91670 . + . ID=gene-RM615_RS09000;Name=RM615_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09000;old_locus_tag=RM615_09010 NZ_JAVRJW010000006.1 Protein Homology CDS 86667 91670 . + 0 ID=cds-WP_311541104.1;Parent=gene-RM615_RS09000;Dbxref=GenBank:WP_311541104.1;Name=WP_311541104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.7;locus_tag=RM615_RS09000;product=Ig-like domain-containing protein;protein_id=WP_311541104.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 91877 92743 . - . ID=gene-RM615_RS09005;Name=RM615_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09005;old_locus_tag=RM615_09015 NZ_JAVRJW010000006.1 Protein Homology CDS 91877 92743 . - 0 ID=cds-WP_037575890.1;Parent=gene-RM615_RS09005;Dbxref=GenBank:WP_037575890.1;Name=WP_037575890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835151.1;locus_tag=RM615_RS09005;product=SDR family oxidoreductase;protein_id=WP_037575890.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 92764 94764 . - . ID=gene-RM615_RS09010;Name=RM615_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09010;old_locus_tag=RM615_09020 NZ_JAVRJW010000006.1 Protein Homology CDS 92764 94764 . - 0 ID=cds-WP_119505395.1;Parent=gene-RM615_RS09010;Dbxref=GenBank:WP_119505395.1;Name=WP_119505395.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=RM615_RS09010;product=catalase;protein_id=WP_119505395.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 95020 96144 . + . ID=gene-RM615_RS09015;Name=RM615_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09015;old_locus_tag=RM615_09025 NZ_JAVRJW010000006.1 Protein Homology CDS 95020 96144 . + 0 ID=cds-WP_037575886.1;Parent=gene-RM615_RS09015;Dbxref=GenBank:WP_037575886.1;Name=WP_037575886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=RM615_RS09015;product=hypothetical protein;protein_id=WP_037575886.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 96371 97513 . + . ID=gene-RM615_RS09020;Name=RM615_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09020;old_locus_tag=RM615_09030 NZ_JAVRJW010000006.1 Protein Homology CDS 96371 97513 . + 0 ID=cds-WP_103159556.1;Parent=gene-RM615_RS09020;Dbxref=GenBank:WP_103159556.1;Name=WP_103159556.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006983.1;locus_tag=RM615_RS09020;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_103159556.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 97559 97735 . - . ID=gene-RM615_RS11255;Name=RM615_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS11255 NZ_JAVRJW010000006.1 Protein Homology CDS 97559 97735 . - 0 ID=cds-WP_490166867.1;Parent=gene-RM615_RS11255;Dbxref=GenBank:WP_490166867.1;Name=WP_490166867.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM615_RS11255;product=VraH family peptide resistance protein;protein_id=WP_490166867.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 97749 97934 . - . ID=gene-RM615_RS09025;Name=RM615_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09025;old_locus_tag=RM615_09035 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 97749 97934 . - 0 ID=cds-WP_037575881.1;Parent=gene-RM615_RS09025;Dbxref=GenBank:WP_037575881.1;Name=WP_037575881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS09025;product=hypothetical protein;protein_id=WP_037575881.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 97947 98150 . - . ID=gene-RM615_RS09030;Name=RM615_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09030;old_locus_tag=RM615_09040 NZ_JAVRJW010000006.1 Protein Homology CDS 97947 98150 . - 0 ID=cds-WP_133171667.1;Parent=gene-RM615_RS09030;Dbxref=GenBank:WP_133171667.1;Name=WP_133171667.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM615_RS09030;product=VraH family peptide resistance protein;protein_id=WP_133171667.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 98276 99160 . + . ID=gene-RM615_RS09035;Name=RM615_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09035;old_locus_tag=RM615_09045 NZ_JAVRJW010000006.1 Protein Homology CDS 98276 99160 . + 0 ID=cds-WP_105963355.1;Parent=gene-RM615_RS09035;Dbxref=GenBank:WP_105963355.1;Name=WP_105963355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010990549.1;locus_tag=RM615_RS09035;product=SDR family oxidoreductase;protein_id=WP_105963355.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 99395 100849 . + . ID=gene-RM615_RS09040;Name=RM615_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09040;old_locus_tag=RM615_09050 NZ_JAVRJW010000006.1 GeneMarkS-2+ CDS 99395 100849 . + 0 ID=cds-WP_311540805.1;Parent=gene-RM615_RS09040;Dbxref=GenBank:WP_311540805.1;Name=WP_311540805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS09040;product=hypothetical protein;protein_id=WP_311540805.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 101203 101865 . + . ID=gene-RM615_RS09045;Name=RM615_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09045;old_locus_tag=RM615_09055 NZ_JAVRJW010000006.1 Protein Homology CDS 101203 101865 . + 0 ID=cds-WP_107363890.1;Parent=gene-RM615_RS09045;Dbxref=GenBank:WP_107363890.1;Name=WP_107363890.1;Ontology_term=GO:0009103,GO:0061097;gbkey=CDS;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,regulation of protein tyrosine kinase activity|0061097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667264.1;locus_tag=RM615_RS09045;product=YveK family protein;protein_id=WP_107363890.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 101881 102588 . + . ID=gene-RM615_RS09050;Name=RM615_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09050;old_locus_tag=RM615_09060 NZ_JAVRJW010000006.1 Protein Homology CDS 101881 102588 . + 0 ID=cds-WP_311540804.1;Parent=gene-RM615_RS09050;Dbxref=GenBank:WP_311540804.1;Name=WP_311540804.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508553.1;locus_tag=RM615_RS09050;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_311540804.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 102585 103355 . + . ID=gene-RM615_RS09055;Name=RM615_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09055;old_locus_tag=RM615_09065 NZ_JAVRJW010000006.1 Protein Homology CDS 102585 103355 . + 0 ID=cds-WP_241955911.1;Parent=gene-RM615_RS09055;Dbxref=GenBank:WP_241955911.1;Name=WP_241955911.1;Ontology_term=GO:0004725,GO:0030145;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488244.1;locus_tag=RM615_RS09055;product=tyrosine-protein phosphatase;protein_id=WP_241955911.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 103379 105187 . + . ID=gene-RM615_RS09060;Name=RM615_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09060;old_locus_tag=RM615_09070 NZ_JAVRJW010000006.1 Protein Homology CDS 103379 105187 . + 0 ID=cds-WP_311540803.1;Parent=gene-RM615_RS09060;Dbxref=GenBank:WP_311540803.1;Name=WP_311540803.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723019.1;locus_tag=RM615_RS09060;product=polysaccharide biosynthesis protein;protein_id=WP_311540803.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 105198 106223 . + . ID=gene-RM615_RS09065;Name=RM615_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09065;old_locus_tag=RM615_09075 NZ_JAVRJW010000006.1 Protein Homology CDS 105198 106223 . + 0 ID=cds-WP_119513223.1;Parent=gene-RM615_RS09065;Dbxref=GenBank:WP_119513223.1;Name=WP_119513223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498718.1;locus_tag=RM615_RS09065;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_119513223.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 106238 107347 . + . ID=gene-RM615_RS09070;Name=RM615_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09070;old_locus_tag=RM615_09080 NZ_JAVRJW010000006.1 Protein Homology CDS 106238 107347 . + 0 ID=cds-WP_311540802.1;Parent=gene-RM615_RS09070;Dbxref=GenBank:WP_311540802.1;Name=WP_311540802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328573.1;locus_tag=RM615_RS09070;product=capsular polysaccharide biosynthesis protein CapF;protein_id=WP_311540802.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 107351 108478 . + . ID=gene-RM615_RS09075;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM615_RS09075;old_locus_tag=RM615_09085 NZ_JAVRJW010000006.1 Protein Homology CDS 107351 108478 . + 0 ID=cds-WP_145400473.1;Parent=gene-RM615_RS09075;Dbxref=GenBank:WP_145400473.1;Name=WP_145400473.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460630.1;locus_tag=RM615_RS09075;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_145400473.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 108475 109587 . + . ID=gene-RM615_RS09080;Name=RM615_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09080;old_locus_tag=RM615_09090 NZ_JAVRJW010000006.1 Protein Homology CDS 108475 109587 . + 0 ID=cds-WP_311540801.1;Parent=gene-RM615_RS09080;Dbxref=GenBank:WP_311540801.1;Name=WP_311540801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216927.1;locus_tag=RM615_RS09080;product=glycosyltransferase family protein;protein_id=WP_311540801.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 109760 110944 . + . ID=gene-RM615_RS09085;Name=RM615_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09085;old_locus_tag=RM615_09095 NZ_JAVRJW010000006.1 Protein Homology CDS 109760 110944 . + 0 ID=cds-WP_311541106.1;Parent=gene-RM615_RS09085;Dbxref=GenBank:WP_311541106.1;Name=WP_311541106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034054.1;locus_tag=RM615_RS09085;product=capsular biosynthesis protein;protein_id=WP_311541106.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 110986 112203 . + . ID=gene-RM615_RS09090;Name=RM615_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09090;old_locus_tag=RM615_09100 NZ_JAVRJW010000006.1 Protein Homology CDS 110986 112203 . + 0 ID=cds-WP_311541107.1;Parent=gene-RM615_RS09090;Dbxref=GenBank:WP_311541107.1;Name=WP_311541107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492471.1;locus_tag=RM615_RS09090;product=oligosaccharide flippase family protein;protein_id=WP_311541107.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 112213 113424 . + . ID=gene-RM615_RS09095;Name=RM615_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09095;old_locus_tag=RM615_09105 NZ_JAVRJW010000006.1 Protein Homology CDS 112213 113424 . + 0 ID=cds-WP_107366344.1;Parent=gene-RM615_RS09095;Dbxref=GenBank:WP_107366344.1;Name=WP_107366344.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291009.1;locus_tag=RM615_RS09095;product=glycosyltransferase family 4 protein;protein_id=WP_107366344.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 113443 114000 . + . ID=gene-RM615_RS09100;Name=RM615_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09100;old_locus_tag=RM615_09110 NZ_JAVRJW010000006.1 Protein Homology CDS 113443 114000 . + 0 ID=cds-WP_311540810.1;Parent=gene-RM615_RS09100;Dbxref=GenBank:WP_311540810.1;Name=WP_311540810.1;Ontology_term=GO:0000271,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498726.1;locus_tag=RM615_RS09100;product=sugar transferase;protein_id=WP_311540810.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 114000 114857 . + . ID=gene-RM615_RS09105;Name=RM615_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09105;old_locus_tag=RM615_09115 NZ_JAVRJW010000006.1 Protein Homology CDS 114000 114857 . + 0 ID=cds-WP_105996979.1;Parent=gene-RM615_RS09105;Dbxref=GenBank:WP_105996979.1;Name=WP_105996979.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF016228.7;locus_tag=RM615_RS09105;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_105996979.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 114975 116126 . + . ID=gene-RM615_RS09110;Name=RM615_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09110;old_locus_tag=RM615_09120 NZ_JAVRJW010000006.1 Protein Homology CDS 114975 116126 . + 0 ID=cds-WP_311540798.1;Parent=gene-RM615_RS09110;Dbxref=GenBank:WP_311540798.1;Name=WP_311540798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455551.1;locus_tag=RM615_RS09110;product=FAD/NAD(P)-binding protein;protein_id=WP_311540798.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 116197 116580 . + . ID=gene-RM615_RS09115;Name=RM615_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09115;old_locus_tag=RM615_09125 NZ_JAVRJW010000006.1 Protein Homology CDS 116197 116580 . + 0 ID=cds-WP_037575866.1;Parent=gene-RM615_RS09115;Dbxref=GenBank:WP_037575866.1;Name=WP_037575866.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426132.1;locus_tag=RM615_RS09115;product=NUDIX hydrolase;protein_id=WP_037575866.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 116622 117023 . - . ID=gene-RM615_RS09120;Name=RM615_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09120;old_locus_tag=RM615_09130 NZ_JAVRJW010000006.1 Protein Homology CDS 116622 117023 . - 0 ID=cds-WP_311540797.1;Parent=gene-RM615_RS09120;Dbxref=GenBank:WP_311540797.1;Name=WP_311540797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=RM615_RS09120;product=hypothetical protein;protein_id=WP_311540797.1;transl_table=11 NZ_JAVRJW010000006.1 RefSeq gene 117639 118261 . + . ID=gene-RM615_RS09125;Name=RM615_RS09125;end_range=118261,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09125;old_locus_tag=RM615_09135;partial=true NZ_JAVRJW010000006.1 Protein Homology CDS 117639 118261 . + 0 ID=cds-WP_311541108.1;Parent=gene-RM615_RS09125;Dbxref=GenBank:WP_311541108.1;Name=WP_311541108.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;end_range=118261,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=RM615_RS09125;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=WP_311541108.1;transl_table=11 ##sequence-region NZ_JAVRJW010000007.1 1 88767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000007.1 RefSeq region 1 88767 . + . ID=NZ_JAVRJW010000007.1:1..88767;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000007.1 RefSeq gene 3 76 . - . ID=gene-RM615_RS09130;Name=RM615_RS09130;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS09130;old_locus_tag=RM615_09140 NZ_JAVRJW010000007.1 tRNAscan-SE tRNA 3 76 . - . ID=rna-RM615_RS09130;Parent=gene-RM615_RS09130;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09130;product=tRNA-Gly NZ_JAVRJW010000007.1 tRNAscan-SE exon 3 76 . - . ID=exon-RM615_RS09130-1;Parent=rna-RM615_RS09130;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09130;product=tRNA-Gly NZ_JAVRJW010000007.1 RefSeq gene 99 181 . - . ID=gene-RM615_RS09135;Name=RM615_RS09135;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS09135;old_locus_tag=RM615_09145 NZ_JAVRJW010000007.1 tRNAscan-SE tRNA 99 181 . - . ID=rna-RM615_RS09135;Parent=gene-RM615_RS09135;anticodon=(pos:complement(146..148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09135;product=tRNA-Leu NZ_JAVRJW010000007.1 tRNAscan-SE exon 99 181 . - . ID=exon-RM615_RS09135-1;Parent=rna-RM615_RS09135;anticodon=(pos:complement(146..148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09135;product=tRNA-Leu NZ_JAVRJW010000007.1 RefSeq gene 630 1085 . - . ID=gene-RM615_RS09140;Name=RM615_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09140;old_locus_tag=RM615_09150 NZ_JAVRJW010000007.1 Protein Homology CDS 630 1085 . - 0 ID=cds-WP_037577163.1;Parent=gene-RM615_RS09140;Dbxref=GenBank:WP_037577163.1;Name=WP_037577163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058114.1;locus_tag=RM615_RS09140;product=SprT family protein;protein_id=WP_037577163.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 1078 3228 . - . ID=gene-RM615_RS09145;Name=RM615_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09145;old_locus_tag=RM615_09155 NZ_JAVRJW010000007.1 Protein Homology CDS 1078 3228 . - 0 ID=cds-WP_103159489.1;Parent=gene-RM615_RS09145;Dbxref=GenBank:WP_103159489.1;Name=WP_103159489.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236007.1;locus_tag=RM615_RS09145;product=Tex family protein;protein_id=WP_103159489.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 3383 4153 . - . ID=gene-RM615_RS09150;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=RM615_RS09150;old_locus_tag=RM615_09160 NZ_JAVRJW010000007.1 Protein Homology CDS 3383 4153 . - 0 ID=cds-WP_037577167.1;Parent=gene-RM615_RS09150;Dbxref=GenBank:WP_037577167.1;Name=WP_037577167.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505950.1;locus_tag=RM615_RS09150;product=RNA polymerase sigma factor SigB;protein_id=WP_037577167.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 4128 4607 . - . ID=gene-RM615_RS09155;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=RM615_RS09155;old_locus_tag=RM615_09165 NZ_JAVRJW010000007.1 Protein Homology CDS 4128 4607 . - 0 ID=cds-WP_037577169.1;Parent=gene-RM615_RS09155;Dbxref=GenBank:WP_037577169.1;Name=WP_037577169.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426491.1;locus_tag=RM615_RS09155;product=anti-sigma B factor RsbW;protein_id=WP_037577169.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 4610 4936 . - . ID=gene-RM615_RS09160;Name=RM615_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09160;old_locus_tag=RM615_09170 NZ_JAVRJW010000007.1 Protein Homology CDS 4610 4936 . - 0 ID=cds-WP_037577172.1;Parent=gene-RM615_RS09160;Dbxref=GenBank:WP_037577172.1;Name=WP_037577172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=RM615_RS09160;product=anti-sigma factor antagonist;protein_id=WP_037577172.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 5017 6021 . - . ID=gene-RM615_RS09165;Name=RM615_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09165;old_locus_tag=RM615_09175 NZ_JAVRJW010000007.1 Protein Homology CDS 5017 6021 . - 0 ID=cds-WP_037577174.1;Parent=gene-RM615_RS09165;Dbxref=GenBank:WP_037577174.1;Name=WP_037577174.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825730.1;locus_tag=RM615_RS09165;product=SpoIIE family protein phosphatase;protein_id=WP_037577174.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 6085 6438 . - . ID=gene-RM615_RS09170;Name=RM615_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09170;old_locus_tag=RM615_09180 NZ_JAVRJW010000007.1 Protein Homology CDS 6085 6438 . - 0 ID=cds-WP_311541109.1;Parent=gene-RM615_RS09170;Dbxref=GenBank:WP_311541109.1;Name=WP_311541109.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=RM615_RS09170;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_311541109.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 6439 6609 . - . ID=gene-RM615_RS09175;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=RM615_RS09175;old_locus_tag=RM615_09185 NZ_JAVRJW010000007.1 Protein Homology CDS 6439 6609 . - 0 ID=cds-WP_037577177.1;Parent=gene-RM615_RS09175;Dbxref=GenBank:WP_037577177.1;Name=WP_037577177.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=RM615_RS09175;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_037577177.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 6694 7842 . - . ID=gene-RM615_RS09180;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM615_RS09180;old_locus_tag=RM615_09190 NZ_JAVRJW010000007.1 Protein Homology CDS 6694 7842 . - 0 ID=cds-WP_037577179.1;Parent=gene-RM615_RS09180;Dbxref=GenBank:WP_037577179.1;Name=WP_037577179.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281145.1;locus_tag=RM615_RS09180;product=alanine racemase;protein_id=WP_037577179.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 7958 8308 . - . ID=gene-RM615_RS09185;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=RM615_RS09185;old_locus_tag=RM615_09195 NZ_JAVRJW010000007.1 Protein Homology CDS 7958 8308 . - 0 ID=cds-WP_037577181.1;Parent=gene-RM615_RS09185;Dbxref=GenBank:WP_037577181.1;Name=WP_037577181.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509014.1;locus_tag=RM615_RS09185;product=holo-ACP synthase;protein_id=WP_037577181.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 8305 8820 . - . ID=gene-RM615_RS09190;Name=RM615_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09190;old_locus_tag=RM615_09200 NZ_JAVRJW010000007.1 Protein Homology CDS 8305 8820 . - 0 ID=cds-WP_311541110.1;Parent=gene-RM615_RS09190;Dbxref=GenBank:WP_311541110.1;Name=WP_311541110.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM615_RS09190;product=PH domain-containing protein;protein_id=WP_311541110.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 8817 10295 . - . ID=gene-RM615_RS09195;Name=RM615_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09195;old_locus_tag=RM615_09205 NZ_JAVRJW010000007.1 Protein Homology CDS 8817 10295 . - 0 ID=cds-WP_037577183.1;Parent=gene-RM615_RS09195;Dbxref=GenBank:WP_037577183.1;Name=WP_037577183.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169261.1;locus_tag=RM615_RS09195;product=PH domain-containing protein;protein_id=WP_037577183.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 10288 10761 . - . ID=gene-RM615_RS09200;Name=RM615_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09200;old_locus_tag=RM615_09210 NZ_JAVRJW010000007.1 Protein Homology CDS 10288 10761 . - 0 ID=cds-WP_107370464.1;Parent=gene-RM615_RS09200;Dbxref=GenBank:WP_107370464.1;Name=WP_107370464.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM615_RS09200;product=PH domain-containing protein;protein_id=WP_107370464.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 11022 12506 . - . ID=gene-RM615_RS09205;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=RM615_RS09205;old_locus_tag=RM615_09215 NZ_JAVRJW010000007.1 Protein Homology CDS 11022 12506 . - 0 ID=cds-WP_103159486.1;Parent=gene-RM615_RS09205;Dbxref=GenBank:WP_103159486.1;Name=WP_103159486.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=RM615_RS09205;product=degradosome RNA helicase CshA;protein_id=WP_103159486.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 12951 14315 . - . ID=gene-RM615_RS09210;Name=RM615_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09210;old_locus_tag=RM615_09220 NZ_JAVRJW010000007.1 Protein Homology CDS 12951 14315 . - 0 ID=cds-WP_105965813.1;Parent=gene-RM615_RS09210;Dbxref=GenBank:WP_105965813.1;Name=WP_105965813.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481758.1;locus_tag=RM615_RS09210;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_105965813.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 14324 15397 . - . ID=gene-RM615_RS09215;Name=RM615_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09215;old_locus_tag=RM615_09225 NZ_JAVRJW010000007.1 Protein Homology CDS 14324 15397 . - 0 ID=cds-WP_105963524.1;Parent=gene-RM615_RS09215;Dbxref=GenBank:WP_105963524.1;Name=WP_105963524.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=RM615_RS09215;product=D-alanine--D-alanine ligase;protein_id=WP_105963524.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 15559 16770 . + . ID=gene-RM615_RS09220;Name=RM615_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09220;old_locus_tag=RM615_09230 NZ_JAVRJW010000007.1 Protein Homology CDS 15559 16770 . + 0 ID=cds-WP_037577191.1;Parent=gene-RM615_RS09220;Dbxref=GenBank:WP_037577191.1;Name=WP_037577191.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169256.1;locus_tag=RM615_RS09220;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_037577191.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 16944 17084 . - . ID=gene-RM615_RS09225;Name=RM615_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09225;old_locus_tag=RM615_09235 NZ_JAVRJW010000007.1 Protein Homology CDS 16944 17084 . - 0 ID=cds-WP_086375151.1;Parent=gene-RM615_RS09225;Dbxref=GenBank:WP_086375151.1;Name=WP_086375151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507098.1;locus_tag=RM615_RS09225;product=Lmo0850 family protein;protein_id=WP_086375151.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 17171 19351 . - . ID=gene-RM615_RS09230;Name=RM615_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09230;old_locus_tag=RM615_09240 NZ_JAVRJW010000007.1 Protein Homology CDS 17171 19351 . - 0 ID=cds-WP_232160177.1;Parent=gene-RM615_RS09230;Dbxref=GenBank:WP_232160177.1;Name=WP_232160177.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426477.1;locus_tag=RM615_RS09230;product=heavy metal translocating P-type ATPase;protein_id=WP_232160177.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 19491 19694 . - . ID=gene-RM615_RS09235;Name=RM615_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09235;old_locus_tag=RM615_09245 NZ_JAVRJW010000007.1 Protein Homology CDS 19491 19694 . - 0 ID=cds-WP_103159259.1;Parent=gene-RM615_RS09235;Dbxref=GenBank:WP_103159259.1;Name=WP_103159259.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169317.1;locus_tag=RM615_RS09235;product=heavy-metal-associated domain-containing protein;protein_id=WP_103159259.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 19696 19920 . - . ID=gene-RM615_RS09240;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=RM615_RS09240;old_locus_tag=RM615_09250 NZ_JAVRJW010000007.1 Protein Homology CDS 19696 19920 . - 0 ID=cds-WP_037577197.1;Parent=gene-RM615_RS09240;Dbxref=GenBank:WP_037577197.1;Name=WP_037577197.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426475.1;locus_tag=RM615_RS09240;product=putative copper chaperone CsoZ;protein_id=WP_037577197.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 19933 20220 . - . ID=gene-RM615_RS09245;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=RM615_RS09245;old_locus_tag=RM615_09255 NZ_JAVRJW010000007.1 Protein Homology CDS 19933 20220 . - 0 ID=cds-WP_037577199.1;Parent=gene-RM615_RS09245;Dbxref=GenBank:WP_037577199.1;Name=WP_037577199.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169315.1;locus_tag=RM615_RS09245;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_037577199.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 20356 21846 . + . ID=gene-RM615_RS09250;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM615_RS09250;old_locus_tag=RM615_09260 NZ_JAVRJW010000007.1 Protein Homology CDS 20356 21846 . + 0 ID=cds-WP_037577201.1;Parent=gene-RM615_RS09250;Dbxref=GenBank:WP_037577201.1;Name=WP_037577201.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455067.1;locus_tag=RM615_RS09250;product=cardiolipin synthase;protein_id=WP_037577201.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 21894 22484 . + . ID=gene-RM615_RS09255;Name=RM615_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09255;old_locus_tag=RM615_09265 NZ_JAVRJW010000007.1 Protein Homology CDS 21894 22484 . + 0 ID=cds-WP_103159262.1;Parent=gene-RM615_RS09255;Dbxref=GenBank:WP_103159262.1;Name=WP_103159262.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187612.1;locus_tag=RM615_RS09255;product=HD domain-containing protein;protein_id=WP_103159262.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 22536 23402 . - . ID=gene-RM615_RS09260;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM615_RS09260;old_locus_tag=RM615_09270 NZ_JAVRJW010000007.1 Protein Homology CDS 22536 23402 . - 0 ID=cds-WP_037577205.1;Parent=gene-RM615_RS09260;Dbxref=GenBank:WP_037577205.1;Name=WP_037577205.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500806.1;locus_tag=RM615_RS09260;product=membrane protein insertase YidC;protein_id=WP_037577205.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 23491 24129 . - . ID=gene-RM615_RS09265;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=RM615_RS09265;old_locus_tag=RM615_09275 NZ_JAVRJW010000007.1 Protein Homology CDS 23491 24129 . - 0 ID=cds-WP_311539571.1;Parent=gene-RM615_RS09265;Dbxref=GenBank:WP_311539571.1;Name=WP_311539571.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165814.1;locus_tag=RM615_RS09265;product=thiamine phosphate synthase;protein_id=WP_311539571.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 24134 24922 . - . ID=gene-RM615_RS09270;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=RM615_RS09270;old_locus_tag=RM615_09280 NZ_JAVRJW010000007.1 Protein Homology CDS 24134 24922 . - 0 ID=cds-WP_037577207.1;Parent=gene-RM615_RS09270;Dbxref=GenBank:WP_037577207.1;Name=WP_037577207.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175143.1;locus_tag=RM615_RS09270;product=hydroxyethylthiazole kinase;protein_id=WP_037577207.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 24924 25730 . - . ID=gene-RM615_RS09275;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM615_RS09275;old_locus_tag=RM615_09285 NZ_JAVRJW010000007.1 Protein Homology CDS 24924 25730 . - 0 ID=cds-WP_037577208.1;Parent=gene-RM615_RS09275;Dbxref=GenBank:WP_037577208.1;Name=WP_037577208.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=RM615_RS09275;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_037577208.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 25732 26412 . - . ID=gene-RM615_RS09280;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=RM615_RS09280;old_locus_tag=RM615_09290 NZ_JAVRJW010000007.1 Protein Homology CDS 25732 26412 . - 0 ID=cds-WP_311539569.1;Parent=gene-RM615_RS09280;Dbxref=GenBank:WP_311539569.1;Name=WP_311539569.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999712.1;locus_tag=RM615_RS09280;product=thiaminase II;protein_id=WP_311539569.1;transl_table=11 NZ_JAVRJW010000007.1 cmsearch riboswitch 26476 26575 . - . ID=id-NZ_JAVRJW010000007.1:26476..26575;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000007.1 RefSeq gene 26702 27508 . - . ID=gene-RM615_RS09285;Name=RM615_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09285;old_locus_tag=RM615_09295 NZ_JAVRJW010000007.1 Protein Homology CDS 26702 27508 . - 0 ID=cds-WP_105963520.1;Parent=gene-RM615_RS09285;Dbxref=GenBank:WP_105963520.1;Name=WP_105963520.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383914.1;locus_tag=RM615_RS09285;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_105963520.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 27979 28296 . - . ID=gene-RM615_RS09290;Name=RM615_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09290;old_locus_tag=RM615_09300 NZ_JAVRJW010000007.1 Protein Homology CDS 27979 28296 . - 0 ID=cds-WP_103159250.1;Parent=gene-RM615_RS09290;Dbxref=GenBank:WP_103159250.1;Name=WP_103159250.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426463.1;locus_tag=RM615_RS09290;product=single-stranded DNA-binding protein;protein_id=WP_103159250.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 28486 28926 . + . ID=gene-RM615_RS09295;Name=RM615_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09295;old_locus_tag=RM615_09305 NZ_JAVRJW010000007.1 Protein Homology CDS 28486 28926 . + 0 ID=cds-WP_037577213.1;Parent=gene-RM615_RS09295;Dbxref=GenBank:WP_037577213.1;Name=WP_037577213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722099.1;locus_tag=RM615_RS09295;product=YwpF-like family protein;protein_id=WP_037577213.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 28958 29398 . - . ID=gene-RM615_RS09300;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=RM615_RS09300;old_locus_tag=RM615_09310 NZ_JAVRJW010000007.1 Protein Homology CDS 28958 29398 . - 0 ID=cds-WP_037576630.1;Parent=gene-RM615_RS09300;Dbxref=GenBank:WP_037576630.1;Name=WP_037576630.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471640.1;locus_tag=RM615_RS09300;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_037576630.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 29398 29601 . - . ID=gene-RM615_RS09305;Name=RM615_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09305;old_locus_tag=RM615_09315 NZ_JAVRJW010000007.1 Protein Homology CDS 29398 29601 . - 0 ID=cds-WP_103159248.1;Parent=gene-RM615_RS09305;Dbxref=GenBank:WP_103159248.1;Name=WP_103159248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426459.1;locus_tag=RM615_RS09305;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_103159248.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 29588 30859 . - . ID=gene-RM615_RS09310;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=RM615_RS09310;old_locus_tag=RM615_09320 NZ_JAVRJW010000007.1 Protein Homology CDS 29588 30859 . - 0 ID=cds-WP_037576624.1;Parent=gene-RM615_RS09310;Dbxref=GenBank:WP_037576624.1;Name=WP_037576624.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302683.1;locus_tag=RM615_RS09310;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_037576624.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 30942 31175 . - . ID=gene-RM615_RS09315;Name=RM615_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09315;old_locus_tag=RM615_09325 NZ_JAVRJW010000007.1 Protein Homology CDS 30942 31175 . - 0 ID=cds-WP_037576621.1;Parent=gene-RM615_RS09315;Dbxref=GenBank:WP_037576621.1;Name=WP_037576621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384524.1;locus_tag=RM615_RS09315;product=DUF1146 family protein;protein_id=WP_037576621.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 31426 31830 . - . ID=gene-RM615_RS09320;Name=RM615_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09320;old_locus_tag=RM615_09330 NZ_JAVRJW010000007.1 Protein Homology CDS 31426 31830 . - 0 ID=cds-WP_103159247.1;Parent=gene-RM615_RS09320;Dbxref=GenBank:WP_103159247.1;Name=WP_103159247.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275244.1;locus_tag=RM615_RS09320;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_103159247.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 31852 33264 . - . ID=gene-RM615_RS09325;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=RM615_RS09325;old_locus_tag=RM615_09335 NZ_JAVRJW010000007.1 Protein Homology CDS 31852 33264 . - 0 ID=cds-WP_037576616.1;Parent=gene-RM615_RS09325;Dbxref=GenBank:WP_037576616.1;Name=WP_037576616.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=RM615_RS09325;product=F0F1 ATP synthase subunit beta;protein_id=WP_037576616.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 33289 34155 . - . ID=gene-RM615_RS09330;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=RM615_RS09330;old_locus_tag=RM615_09340 NZ_JAVRJW010000007.1 Protein Homology CDS 33289 34155 . - 0 ID=cds-WP_107367166.1;Parent=gene-RM615_RS09330;Dbxref=GenBank:WP_107367166.1;Name=WP_107367166.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157596.1;locus_tag=RM615_RS09330;product=ATP synthase F1 subunit gamma;protein_id=WP_107367166.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 34187 35695 . - . ID=gene-RM615_RS09335;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=RM615_RS09335;old_locus_tag=RM615_09345 NZ_JAVRJW010000007.1 Protein Homology CDS 34187 35695 . - 0 ID=cds-WP_037576611.1;Parent=gene-RM615_RS09335;Dbxref=GenBank:WP_037576611.1;Name=WP_037576611.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500822.1;locus_tag=RM615_RS09335;product=F0F1 ATP synthase subunit alpha;protein_id=WP_037576611.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 35723 36262 . - . ID=gene-RM615_RS09340;Name=RM615_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09340;old_locus_tag=RM615_09350 NZ_JAVRJW010000007.1 Protein Homology CDS 35723 36262 . - 0 ID=cds-WP_311541111.1;Parent=gene-RM615_RS09340;Dbxref=GenBank:WP_311541111.1;Name=WP_311541111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165805.1;locus_tag=RM615_RS09340;product=F0F1 ATP synthase subunit delta;protein_id=WP_311541111.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 36262 36768 . - . ID=gene-RM615_RS09345;Name=RM615_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09345;old_locus_tag=RM615_09355 NZ_JAVRJW010000007.1 Protein Homology CDS 36262 36768 . - 0 ID=cds-WP_037576642.1;Parent=gene-RM615_RS09345;Dbxref=GenBank:WP_037576642.1;Name=WP_037576642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461233.1;locus_tag=RM615_RS09345;product=F0F1 ATP synthase subunit B;protein_id=WP_037576642.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 37043 37255 . - . ID=gene-RM615_RS09350;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=RM615_RS09350;old_locus_tag=RM615_09360 NZ_JAVRJW010000007.1 Protein Homology CDS 37043 37255 . - 0 ID=cds-WP_037576605.1;Parent=gene-RM615_RS09350;Dbxref=GenBank:WP_037576605.1;Name=WP_037576605.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478963.1;locus_tag=RM615_RS09350;product=F0F1 ATP synthase subunit C;protein_id=WP_037576605.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 37298 38017 . - . ID=gene-RM615_RS09355;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=RM615_RS09355;old_locus_tag=RM615_09365 NZ_JAVRJW010000007.1 Protein Homology CDS 37298 38017 . - 0 ID=cds-WP_311541112.1;Parent=gene-RM615_RS09355;Dbxref=GenBank:WP_311541112.1;Name=WP_311541112.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829936.1;locus_tag=RM615_RS09355;product=F0F1 ATP synthase subunit A;protein_id=WP_311541112.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 38037 38333 . - . ID=gene-RM615_RS09360;Name=RM615_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09360;old_locus_tag=RM615_09370 NZ_JAVRJW010000007.1 Protein Homology CDS 38037 38333 . - 0 ID=cds-WP_311541113.1;Parent=gene-RM615_RS09360;Dbxref=GenBank:WP_311541113.1;Name=WP_311541113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=RM615_RS09360;product=hypothetical protein;protein_id=WP_311541113.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 38560 39699 . - . ID=gene-RM615_RS09365;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM615_RS09365;old_locus_tag=RM615_09375 NZ_JAVRJW010000007.1 Protein Homology CDS 38560 39699 . - 0 ID=cds-WP_105963468.1;Parent=gene-RM615_RS09365;Dbxref=GenBank:WP_105963468.1;Name=WP_105963468.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912263.1;locus_tag=RM615_RS09365;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_105963468.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 39727 40356 . - . ID=gene-RM615_RS09370;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=RM615_RS09370;old_locus_tag=RM615_09380 NZ_JAVRJW010000007.1 Protein Homology CDS 39727 40356 . - 0 ID=cds-WP_037576594.1;Parent=gene-RM615_RS09370;Dbxref=GenBank:WP_037576594.1;Name=WP_037576594.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=RM615_RS09370;product=uracil phosphoribosyltransferase;protein_id=WP_037576594.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 40379 41617 . - . ID=gene-RM615_RS09375;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=RM615_RS09375;old_locus_tag=RM615_09385 NZ_JAVRJW010000007.1 Protein Homology CDS 40379 41617 . - 0 ID=cds-WP_105963467.1;Parent=gene-RM615_RS09375;Dbxref=GenBank:WP_105963467.1;Name=WP_105963467.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507071.1;locus_tag=RM615_RS09375;product=serine hydroxymethyltransferase;protein_id=WP_105963467.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 41640 42167 . - . ID=gene-RM615_RS09380;Name=RM615_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09380;old_locus_tag=RM615_09390 NZ_JAVRJW010000007.1 Protein Homology CDS 41640 42167 . - 0 ID=cds-WP_037576588.1;Parent=gene-RM615_RS09380;Dbxref=GenBank:WP_037576588.1;Name=WP_037576588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=RM615_RS09380;product=TIGR01440 family protein;protein_id=WP_037576588.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 42292 42711 . - . ID=gene-RM615_RS09385;Name=RM615_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09385;old_locus_tag=RM615_09395 NZ_JAVRJW010000007.1 Protein Homology CDS 42292 42711 . - 0 ID=cds-WP_037576586.1;Parent=gene-RM615_RS09385;Dbxref=GenBank:WP_037576586.1;Name=WP_037576586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=RM615_RS09385;product=low molecular weight protein arginine phosphatase;protein_id=WP_037576586.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 42708 43757 . - . ID=gene-RM615_RS09390;Name=RM615_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09390;old_locus_tag=RM615_09400 NZ_JAVRJW010000007.1 Protein Homology CDS 42708 43757 . - 0 ID=cds-WP_172458459.1;Parent=gene-RM615_RS09390;Dbxref=GenBank:WP_172458459.1;Name=WP_172458459.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275230.1;locus_tag=RM615_RS09390;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_172458459.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 43845 44687 . - . ID=gene-RM615_RS09395;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=RM615_RS09395;old_locus_tag=RM615_09405 NZ_JAVRJW010000007.1 Protein Homology CDS 43845 44687 . - 0 ID=cds-WP_103159243.1;Parent=gene-RM615_RS09395;Dbxref=GenBank:WP_103159243.1;Name=WP_103159243.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=RM615_RS09395;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_103159243.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 44677 45753 . - . ID=gene-RM615_RS09400;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=RM615_RS09400;old_locus_tag=RM615_09410 NZ_JAVRJW010000007.1 Protein Homology CDS 44677 45753 . - 0 ID=cds-WP_103159242.1;Parent=gene-RM615_RS09400;Dbxref=GenBank:WP_103159242.1;Name=WP_103159242.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=RM615_RS09400;product=peptide chain release factor 1;protein_id=WP_103159242.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 45757 46353 . - . ID=gene-RM615_RS09405;Name=RM615_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09405;old_locus_tag=RM615_09415 NZ_JAVRJW010000007.1 Protein Homology CDS 45757 46353 . - 0 ID=cds-WP_037576579.1;Parent=gene-RM615_RS09405;Dbxref=GenBank:WP_037576579.1;Name=WP_037576579.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=RM615_RS09405;product=thymidine kinase;protein_id=WP_037576579.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 46584 46838 . - . ID=gene-RM615_RS09410;Name=RM615_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09410;old_locus_tag=RM615_09420 NZ_JAVRJW010000007.1 Protein Homology CDS 46584 46838 . - 0 ID=cds-WP_037576577.1;Parent=gene-RM615_RS09410;Dbxref=GenBank:WP_037576577.1;Name=WP_037576577.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=RM615_RS09410;product=type B 50S ribosomal protein L31;protein_id=WP_037576577.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 46960 48276 . - . ID=gene-RM615_RS09415;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=RM615_RS09415;old_locus_tag=RM615_09425 NZ_JAVRJW010000007.1 Protein Homology CDS 46960 48276 . - 0 ID=cds-WP_037576574.1;Parent=gene-RM615_RS09415;Dbxref=GenBank:WP_037576574.1;Name=WP_037576574.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=RM615_RS09415;product=transcription termination factor Rho;protein_id=WP_037576574.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 48460 49890 . - . ID=gene-RM615_RS09420;Name=RM615_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09420;old_locus_tag=RM615_09430 NZ_JAVRJW010000007.1 Protein Homology CDS 48460 49890 . - 0 ID=cds-WP_105963465.1;Parent=gene-RM615_RS09420;Dbxref=GenBank:WP_105963465.1;Name=WP_105963465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=RM615_RS09420;product=aldehyde dehydrogenase family protein;protein_id=WP_105963465.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 50104 50430 . - . ID=gene-RM615_RS09425;Name=RM615_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09425;old_locus_tag=RM615_09435 NZ_JAVRJW010000007.1 Protein Homology CDS 50104 50430 . - 0 ID=cds-WP_103159239.1;Parent=gene-RM615_RS09425;Dbxref=GenBank:WP_103159239.1;Name=WP_103159239.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165793.1;locus_tag=RM615_RS09425;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_103159239.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 50479 51744 . - . ID=gene-RM615_RS09430;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=RM615_RS09430;old_locus_tag=RM615_09440 NZ_JAVRJW010000007.1 Protein Homology CDS 50479 51744 . - 0 ID=cds-WP_311541114.1;Parent=gene-RM615_RS09430;Dbxref=GenBank:WP_311541114.1;Name=WP_311541114.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=RM615_RS09430;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_311541114.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 51988 52860 . - . ID=gene-RM615_RS09435;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=RM615_RS09435;old_locus_tag=RM615_09445 NZ_JAVRJW010000007.1 Protein Homology CDS 51988 52860 . - 0 ID=cds-WP_037576564.1;Parent=gene-RM615_RS09435;Dbxref=GenBank:WP_037576564.1;Name=WP_037576564.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=RM615_RS09435;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_037576564.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 53077 53598 . + . ID=gene-RM615_RS09440;Name=RM615_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09440;old_locus_tag=RM615_09450 NZ_JAVRJW010000007.1 Protein Homology CDS 53077 53598 . + 0 ID=cds-WP_037576561.1;Parent=gene-RM615_RS09440;Dbxref=GenBank:WP_037576561.1;Name=WP_037576561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808089.1;locus_tag=RM615_RS09440;product=DUF2529 family protein;protein_id=WP_037576561.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 53662 55269 . - . ID=gene-RM615_RS09445;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=RM615_RS09445;old_locus_tag=RM615_09455 NZ_JAVRJW010000007.1 Protein Homology CDS 53662 55269 . - 0 ID=cds-WP_037576559.1;Parent=gene-RM615_RS09445;Dbxref=GenBank:WP_037576559.1;Name=WP_037576559.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500844.1;locus_tag=RM615_RS09445;product=CTP synthase;protein_id=WP_037576559.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 55665 56198 . - . ID=gene-RM615_RS09450;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=RM615_RS09450;old_locus_tag=RM615_09460 NZ_JAVRJW010000007.1 Protein Homology CDS 55665 56198 . - 0 ID=cds-WP_037576556.1;Parent=gene-RM615_RS09450;Dbxref=GenBank:WP_037576556.1;Name=WP_037576556.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=RM615_RS09450;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_037576556.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 56367 57227 . - . ID=gene-RM615_RS09455;Name=RM615_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09455;old_locus_tag=RM615_09465 NZ_JAVRJW010000007.1 Protein Homology CDS 56367 57227 . - 0 ID=cds-WP_103159237.1;Parent=gene-RM615_RS09455;Dbxref=GenBank:WP_103159237.1;Name=WP_103159237.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=RM615_RS09455;product=GNAT family N-acetyltransferase;protein_id=WP_103159237.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 57315 58916 . + . ID=gene-RM615_RS09460;Name=RM615_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09460;old_locus_tag=RM615_09470 NZ_JAVRJW010000007.1 Protein Homology CDS 57315 58916 . + 0 ID=cds-WP_037576550.1;Parent=gene-RM615_RS09460;Dbxref=GenBank:WP_037576550.1;Name=WP_037576550.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=RM615_RS09460;product=BCCT family transporter;protein_id=WP_037576550.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 58959 59327 . - . ID=gene-RM615_RS09465;Name=RM615_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09465;old_locus_tag=RM615_09475 NZ_JAVRJW010000007.1 Protein Homology CDS 58959 59327 . - 0 ID=cds-WP_103159236.1;Parent=gene-RM615_RS09465;Dbxref=GenBank:WP_103159236.1;Name=WP_103159236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900879.1;locus_tag=RM615_RS09465;product=VOC family protein;protein_id=WP_103159236.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 59434 60231 . + . ID=gene-RM615_RS09470;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=RM615_RS09470;old_locus_tag=RM615_09480 NZ_JAVRJW010000007.1 Protein Homology CDS 59434 60231 . + 0 ID=cds-WP_037576548.1;Parent=gene-RM615_RS09470;Dbxref=GenBank:WP_037576548.1;Name=WP_037576548.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=RM615_RS09470;product=type II pantothenate kinase;protein_id=WP_037576548.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 60404 61075 . - . ID=gene-RM615_RS09475;Name=RM615_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09475;old_locus_tag=RM615_09485 NZ_JAVRJW010000007.1 Protein Homology CDS 60404 61075 . - 0 ID=cds-WP_037576545.1;Parent=gene-RM615_RS09475;Dbxref=GenBank:WP_037576545.1;Name=WP_037576545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120545.1;locus_tag=RM615_RS09475;product=DUF2750 domain-containing protein;protein_id=WP_037576545.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 61166 62347 . - . ID=gene-RM615_RS09480;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=RM615_RS09480;old_locus_tag=RM615_09490 NZ_JAVRJW010000007.1 Protein Homology CDS 61166 62347 . - 0 ID=cds-WP_311541115.1;Parent=gene-RM615_RS09480;Dbxref=GenBank:WP_311541115.1;Name=WP_311541115.1;Ontology_term=GO:0006555,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=RM615_RS09480;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_311541115.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 62348 63532 . - . ID=gene-RM615_RS09485;Name=RM615_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09485;old_locus_tag=RM615_09495 NZ_JAVRJW010000007.1 Protein Homology CDS 62348 63532 . - 0 ID=cds-WP_037576542.1;Parent=gene-RM615_RS09485;Dbxref=GenBank:WP_037576542.1;Name=WP_037576542.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426424.1;locus_tag=RM615_RS09485;product=M20 family metallopeptidase;protein_id=WP_037576542.1;transl_table=11 NZ_JAVRJW010000007.1 cmsearch riboswitch 63627 63736 . - . ID=id-NZ_JAVRJW010000007.1:63627..63736;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVRJW010000007.1 RefSeq gene 63963 64430 . + . ID=gene-RM615_RS09490;Name=RM615_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09490;old_locus_tag=RM615_09500 NZ_JAVRJW010000007.1 Protein Homology CDS 63963 64430 . + 0 ID=cds-WP_037576541.1;Parent=gene-RM615_RS09490;Dbxref=GenBank:WP_037576541.1;Name=WP_037576541.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=RM615_RS09490;product=S-ribosylhomocysteine lyase;protein_id=WP_037576541.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 64529 64882 . - . ID=gene-RM615_RS09495;Name=RM615_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09495;old_locus_tag=RM615_09505 NZ_JAVRJW010000007.1 Protein Homology CDS 64529 64882 . - 0 ID=cds-WP_037576538.1;Parent=gene-RM615_RS09495;Dbxref=GenBank:WP_037576538.1;Name=WP_037576538.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=RM615_RS09495;product=DoxX family protein;protein_id=WP_037576538.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 64889 66190 . - . ID=gene-RM615_RS09500;Name=RM615_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09500;old_locus_tag=RM615_09510 NZ_JAVRJW010000007.1 Protein Homology CDS 64889 66190 . - 0 ID=cds-WP_103159234.1;Parent=gene-RM615_RS09500;Dbxref=GenBank:WP_103159234.1;Name=WP_103159234.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=RM615_RS09500;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_103159234.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 66400 67110 . + . ID=gene-RM615_RS09505;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM615_RS09505;old_locus_tag=RM615_09515 NZ_JAVRJW010000007.1 Protein Homology CDS 66400 67110 . + 0 ID=cds-WP_311541116.1;Parent=gene-RM615_RS09505;Dbxref=GenBank:WP_311541116.1;Name=WP_311541116.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=RM615_RS09505;product=purine-nucleoside phosphorylase;protein_id=WP_311541116.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 67275 67700 . - . ID=gene-RM615_RS09510;Name=RM615_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09510;old_locus_tag=RM615_09520 NZ_JAVRJW010000007.1 Protein Homology CDS 67275 67700 . - 0 ID=cds-WP_037576530.1;Parent=gene-RM615_RS09510;Dbxref=GenBank:WP_037576530.1;Name=WP_037576530.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123303.1;locus_tag=RM615_RS09510;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_037576530.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 67810 69237 . - . ID=gene-RM615_RS09515;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM615_RS09515;old_locus_tag=RM615_09525 NZ_JAVRJW010000007.1 Protein Homology CDS 67810 69237 . - 0 ID=cds-WP_311541117.1;Parent=gene-RM615_RS09515;Dbxref=GenBank:WP_311541117.1;Name=WP_311541117.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506651.1;locus_tag=RM615_RS09515;product=Na+/H+ antiporter NhaC;protein_id=WP_311541117.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 69602 70966 . - . ID=gene-RM615_RS09520;Name=RM615_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09520;old_locus_tag=RM615_09530 NZ_JAVRJW010000007.1 Protein Homology CDS 69602 70966 . - 0 ID=cds-WP_105963460.1;Parent=gene-RM615_RS09520;Dbxref=GenBank:WP_105963460.1;Name=WP_105963460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=RM615_RS09520;product=EVE domain-containing protein;protein_id=WP_105963460.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 71035 71271 . - . ID=gene-RM615_RS09525;Name=RM615_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09525;old_locus_tag=RM615_09535 NZ_JAVRJW010000007.1 Protein Homology CDS 71035 71271 . - 0 ID=cds-WP_037576636.1;Parent=gene-RM615_RS09525;Dbxref=GenBank:WP_037576636.1;Name=WP_037576636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426417.1;locus_tag=RM615_RS09525;product=hypothetical protein;protein_id=WP_037576636.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 71288 72226 . - . ID=gene-RM615_RS09530;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=RM615_RS09530;old_locus_tag=RM615_09540 NZ_JAVRJW010000007.1 Protein Homology CDS 71288 72226 . - 0 ID=cds-WP_103159231.1;Parent=gene-RM615_RS09530;Dbxref=GenBank:WP_103159231.1;Name=WP_103159231.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=RM615_RS09530;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_103159231.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 72393 73094 . - . ID=gene-RM615_RS09535;Name=RM615_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09535;old_locus_tag=RM615_09545 NZ_JAVRJW010000007.1 Protein Homology CDS 72393 73094 . - 0 ID=cds-WP_311541118.1;Parent=gene-RM615_RS09535;Dbxref=GenBank:WP_311541118.1;Name=WP_311541118.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729460.1;locus_tag=RM615_RS09535;product=FadR/GntR family transcriptional regulator;protein_id=WP_311541118.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 73335 74246 . + . ID=gene-RM615_RS09540;Name=RM615_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09540;old_locus_tag=RM615_09550 NZ_JAVRJW010000007.1 GeneMarkS-2+ CDS 73335 74246 . + 0 ID=cds-WP_037576517.1;Parent=gene-RM615_RS09540;Dbxref=GenBank:WP_037576517.1;Name=WP_037576517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS09540;product=hypothetical protein;protein_id=WP_037576517.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 74322 75176 . - . ID=gene-RM615_RS09545;Name=RM615_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09545;old_locus_tag=RM615_09555 NZ_JAVRJW010000007.1 Protein Homology CDS 74322 75176 . - 0 ID=cds-WP_037576516.1;Parent=gene-RM615_RS09545;Dbxref=GenBank:WP_037576516.1;Name=WP_037576516.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451699.1;locus_tag=RM615_RS09545;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037576516.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 75245 76024 . - . ID=gene-RM615_RS09550;Name=RM615_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09550;old_locus_tag=RM615_09560 NZ_JAVRJW010000007.1 Protein Homology CDS 75245 76024 . - 0 ID=cds-WP_311541119.1;Parent=gene-RM615_RS09550;Dbxref=GenBank:WP_311541119.1;Name=WP_311541119.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=RM615_RS09550;product=ABC transporter ATP-binding protein;protein_id=WP_311541119.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 76127 77929 . - . ID=gene-RM615_RS09555;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=RM615_RS09555;old_locus_tag=RM615_09565 NZ_JAVRJW010000007.1 Protein Homology CDS 76127 77929 . - 0 ID=cds-WP_037576514.1;Parent=gene-RM615_RS09555;Dbxref=GenBank:WP_037576514.1;Name=WP_037576514.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=RM615_RS09555;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_037576514.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 78670 80211 . + . ID=gene-RM615_RS09560;Name=RM615_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09560;old_locus_tag=RM615_09570 NZ_JAVRJW010000007.1 Protein Homology CDS 78670 80211 . + 0 ID=cds-WP_107366634.1;Parent=gene-RM615_RS09560;Dbxref=GenBank:WP_107366634.1;Name=WP_107366634.1;Ontology_term=GO:0009401,GO:0015797,GO:0022872,GO:0090565,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA,protein-phosphocysteine-mannitol phosphotransferase system transporter activity|0090565||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannitol transmembrane transport|0015797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482675.1;locus_tag=RM615_RS09560;product=PTS mannitol transporter subunit IIBC;protein_id=WP_107366634.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 80258 82279 . + . ID=gene-RM615_RS09565;Name=RM615_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09565;old_locus_tag=RM615_09575 NZ_JAVRJW010000007.1 Protein Homology CDS 80258 82279 . + 0 ID=cds-WP_311541120.1;Parent=gene-RM615_RS09565;Dbxref=GenBank:WP_311541120.1;Name=WP_311541120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168357.1;locus_tag=RM615_RS09565;product=BglG family transcription antiterminator;protein_id=WP_311541120.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 82292 82726 . + . ID=gene-RM615_RS09570;Name=RM615_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09570;old_locus_tag=RM615_09580 NZ_JAVRJW010000007.1 Protein Homology CDS 82292 82726 . + 0 ID=cds-WP_105965782.1;Parent=gene-RM615_RS09570;Dbxref=GenBank:WP_105965782.1;Name=WP_105965782.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729468.1;locus_tag=RM615_RS09570;product=PTS mannitol transporter subunit IIA;protein_id=WP_105965782.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 82726 83829 . + . ID=gene-RM615_RS09575;Name=RM615_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09575;old_locus_tag=RM615_09585 NZ_JAVRJW010000007.1 Protein Homology CDS 82726 83829 . + 0 ID=cds-WP_311541121.1;Parent=gene-RM615_RS09575;Dbxref=GenBank:WP_311541121.1;Name=WP_311541121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302636.1;locus_tag=RM615_RS09575;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_311541121.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 83885 85234 . - . ID=gene-RM615_RS09580;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=RM615_RS09580;old_locus_tag=RM615_09590 NZ_JAVRJW010000007.1 Protein Homology CDS 83885 85234 . - 0 ID=cds-WP_037576510.1;Parent=gene-RM615_RS09580;Dbxref=GenBank:WP_037576510.1;Name=WP_037576510.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500881.1;locus_tag=RM615_RS09580;product=phosphoglucosamine mutase;protein_id=WP_037576510.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 85262 86194 . - . ID=gene-RM615_RS09585;Name=RM615_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09585;old_locus_tag=RM615_09595 NZ_JAVRJW010000007.1 Protein Homology CDS 85262 86194 . - 0 ID=cds-WP_103159226.1;Parent=gene-RM615_RS09585;Dbxref=GenBank:WP_103159226.1;Name=WP_103159226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=RM615_RS09585;product=CdaR family protein;protein_id=WP_103159226.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 86195 87001 . - . ID=gene-RM615_RS09590;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=RM615_RS09590;old_locus_tag=RM615_09600 NZ_JAVRJW010000007.1 Protein Homology CDS 86195 87001 . - 0 ID=cds-WP_037576505.1;Parent=gene-RM615_RS09590;Dbxref=GenBank:WP_037576505.1;Name=WP_037576505.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453752.1;locus_tag=RM615_RS09590;product=diadenylate cyclase CdaA;protein_id=WP_037576505.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 87154 88059 . - . ID=gene-RM615_RS09595;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=RM615_RS09595;old_locus_tag=RM615_09605 NZ_JAVRJW010000007.1 Protein Homology CDS 87154 88059 . - 0 ID=cds-WP_105965785.1;Parent=gene-RM615_RS09595;Dbxref=GenBank:WP_105965785.1;Name=WP_105965785.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=RM615_RS09595;product=arginase;protein_id=WP_105965785.1;transl_table=11 NZ_JAVRJW010000007.1 RefSeq gene 88539 88611 . - . ID=gene-RM615_RS09600;Name=RM615_RS09600;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS09600;old_locus_tag=RM615_09610 NZ_JAVRJW010000007.1 tRNAscan-SE tRNA 88539 88611 . - . ID=rna-RM615_RS09600;Parent=gene-RM615_RS09600;anticodon=(pos:complement(88576..88578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09600;product=tRNA-Lys NZ_JAVRJW010000007.1 tRNAscan-SE exon 88539 88611 . - . ID=exon-RM615_RS09600-1;Parent=rna-RM615_RS09600;anticodon=(pos:complement(88576..88578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09600;product=tRNA-Lys NZ_JAVRJW010000007.1 RefSeq gene 88615 88689 . - . ID=gene-RM615_RS09605;Name=RM615_RS09605;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM615_RS09605;old_locus_tag=RM615_09615 NZ_JAVRJW010000007.1 tRNAscan-SE tRNA 88615 88689 . - . ID=rna-RM615_RS09605;Parent=gene-RM615_RS09605;anticodon=(pos:complement(88655..88657));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09605;product=tRNA-Gln NZ_JAVRJW010000007.1 tRNAscan-SE exon 88615 88689 . - . ID=exon-RM615_RS09605-1;Parent=rna-RM615_RS09605;anticodon=(pos:complement(88655..88657));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM615_RS09605;product=tRNA-Gln ##sequence-region NZ_JAVRJW010000008.1 1 78699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000008.1 RefSeq region 1 78699 . + . ID=NZ_JAVRJW010000008.1:1..78699;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000008.1 RefSeq gene 504 962 . - . ID=gene-RM615_RS09610;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=RM615_RS09610;old_locus_tag=RM615_09620 NZ_JAVRJW010000008.1 Protein Homology CDS 504 962 . - 0 ID=cds-WP_037575843.1;Parent=gene-RM615_RS09610;Dbxref=GenBank:WP_037575843.1;Name=WP_037575843.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169390.1;locus_tag=RM615_RS09610;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_037575843.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 1047 1997 . - . ID=gene-RM615_RS09615;Name=RM615_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09615;old_locus_tag=RM615_09625 NZ_JAVRJW010000008.1 Protein Homology CDS 1047 1997 . - 0 ID=cds-WP_037575840.1;Parent=gene-RM615_RS09615;Dbxref=GenBank:WP_037575840.1;Name=WP_037575840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=RM615_RS09615;product=phosphoglycerate dehydrogenase;protein_id=WP_037575840.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 2003 2461 . - . ID=gene-RM615_RS09620;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=RM615_RS09620;old_locus_tag=RM615_09630 NZ_JAVRJW010000008.1 Protein Homology CDS 2003 2461 . - 0 ID=cds-WP_037575837.1;Parent=gene-RM615_RS09620;Dbxref=GenBank:WP_037575837.1;Name=WP_037575837.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=RM615_RS09620;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_037575837.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 2542 3837 . + . ID=gene-RM615_RS09625;Name=RM615_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09625;old_locus_tag=RM615_09635 NZ_JAVRJW010000008.1 Protein Homology CDS 2542 3837 . + 0 ID=cds-WP_037575834.1;Parent=gene-RM615_RS09625;Dbxref=GenBank:WP_037575834.1;Name=WP_037575834.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=RM615_RS09625;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_037575834.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 4054 5148 . + . ID=gene-RM615_RS09630;Name=RM615_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09630;old_locus_tag=RM615_09640 NZ_JAVRJW010000008.1 Protein Homology CDS 4054 5148 . + 0 ID=cds-WP_037575825.1;Parent=gene-RM615_RS09630;Dbxref=GenBank:WP_037575825.1;Name=WP_037575825.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=RM615_RS09630;product=FUSC family protein;protein_id=WP_037575825.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 5227 6804 . - . ID=gene-RM615_RS09635;Name=RM615_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09635;old_locus_tag=RM615_09645 NZ_JAVRJW010000008.1 Protein Homology CDS 5227 6804 . - 0 ID=cds-WP_103159010.1;Parent=gene-RM615_RS09635;Dbxref=GenBank:WP_103159010.1;Name=WP_103159010.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510022.1;locus_tag=RM615_RS09635;product=FMN-binding glutamate synthase family protein;protein_id=WP_103159010.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 6968 8704 . - . ID=gene-RM615_RS09640;Name=RM615_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09640;old_locus_tag=RM615_09650 NZ_JAVRJW010000008.1 Protein Homology CDS 6968 8704 . - 0 ID=cds-WP_105996926.1;Parent=gene-RM615_RS09640;Dbxref=GenBank:WP_105996926.1;Name=WP_105996926.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=RM615_RS09640;product=ABC transporter ATP-binding protein;protein_id=WP_105996926.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 8838 9383 . - . ID=gene-RM615_RS09645;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=RM615_RS09645;old_locus_tag=RM615_09655 NZ_JAVRJW010000008.1 Protein Homology CDS 8838 9383 . - 0 ID=cds-WP_037575819.1;Parent=gene-RM615_RS09645;Dbxref=GenBank:WP_037575819.1;Name=WP_037575819.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495215.1;locus_tag=RM615_RS09645;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_037575819.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 9440 10492 . - . ID=gene-RM615_RS09650;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=RM615_RS09650;old_locus_tag=RM615_09660 NZ_JAVRJW010000008.1 Protein Homology CDS 9440 10492 . - 0 ID=cds-WP_037575817.1;Parent=gene-RM615_RS09650;Dbxref=GenBank:WP_037575817.1;Name=WP_037575817.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900686.1;locus_tag=RM615_RS09650;product=A/G-specific adenine glycosylase;protein_id=WP_037575817.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 10581 11558 . + . ID=gene-RM615_RS09655;Name=RM615_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09655;old_locus_tag=RM615_09665 NZ_JAVRJW010000008.1 Protein Homology CDS 10581 11558 . + 0 ID=cds-WP_107368089.1;Parent=gene-RM615_RS09655;Dbxref=GenBank:WP_107368089.1;Name=WP_107368089.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=RM615_RS09655;product=metal-dependent hydrolase;protein_id=WP_107368089.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 12024 12839 . - . ID=gene-RM615_RS09660;Name=RM615_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09660;old_locus_tag=RM615_09670 NZ_JAVRJW010000008.1 Protein Homology CDS 12024 12839 . - 0 ID=cds-WP_051604990.1;Parent=gene-RM615_RS09660;Dbxref=GenBank:WP_051604990.1;Name=WP_051604990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=RM615_RS09660;product=teichoic acid translocation permease;protein_id=WP_051604990.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 12848 14374 . - . ID=gene-RM615_RS09665;Name=RM615_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09665;old_locus_tag=RM615_09675 NZ_JAVRJW010000008.1 Protein Homology CDS 12848 14374 . - 0 ID=cds-WP_037575812.1;Parent=gene-RM615_RS09665;Dbxref=GenBank:WP_037575812.1;Name=WP_037575812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804867.1;locus_tag=RM615_RS09665;product=ABC transporter ATP-binding protein;protein_id=WP_037575812.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 14390 14701 . - . ID=gene-RM615_RS09670;Name=RM615_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09670;old_locus_tag=RM615_09680 NZ_JAVRJW010000008.1 Protein Homology CDS 14390 14701 . - 0 ID=cds-WP_105963447.1;Parent=gene-RM615_RS09670;Dbxref=GenBank:WP_105963447.1;Name=WP_105963447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435810.1;locus_tag=RM615_RS09670;product=YfhH family protein;protein_id=WP_105963447.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 14691 15497 . - . ID=gene-RM615_RS09675;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=RM615_RS09675;old_locus_tag=RM615_09685 NZ_JAVRJW010000008.1 Protein Homology CDS 14691 15497 . - 0 ID=cds-WP_311539580.1;Parent=gene-RM615_RS09675;Dbxref=GenBank:WP_311539580.1;Name=WP_311539580.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175220.1;locus_tag=RM615_RS09675;product=recombination regulator RecX;protein_id=WP_311539580.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 15583 16389 . - . ID=gene-RM615_RS09680;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=RM615_RS09680;old_locus_tag=RM615_09690 NZ_JAVRJW010000008.1 Protein Homology CDS 15583 16389 . - 0 ID=cds-WP_105965739.1;Parent=gene-RM615_RS09680;Dbxref=GenBank:WP_105965739.1;Name=WP_105965739.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452353.1;locus_tag=RM615_RS09680;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_105965739.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 16554 18299 . + . ID=gene-RM615_RS09685;Name=RM615_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09685;old_locus_tag=RM615_09695 NZ_JAVRJW010000008.1 Protein Homology CDS 16554 18299 . + 0 ID=cds-WP_105963444.1;Parent=gene-RM615_RS09685;Dbxref=GenBank:WP_105963444.1;Name=WP_105963444.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=RM615_RS09685;product=pyruvate oxidase;protein_id=WP_105963444.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 18525 19043 . - . ID=gene-RM615_RS09690;Name=RM615_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09690;old_locus_tag=RM615_09700 NZ_JAVRJW010000008.1 Protein Homology CDS 18525 19043 . - 0 ID=cds-WP_037575802.1;Parent=gene-RM615_RS09690;Dbxref=GenBank:WP_037575802.1;Name=WP_037575802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302786.1;locus_tag=RM615_RS09690;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_037575802.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 19114 19275 . - . ID=gene-RM615_RS09695;Name=RM615_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09695;old_locus_tag=RM615_09705 NZ_JAVRJW010000008.1 Protein Homology CDS 19114 19275 . - 0 ID=cds-WP_165806293.1;Parent=gene-RM615_RS09695;Dbxref=GenBank:WP_165806293.1;Name=WP_165806293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=RM615_RS09695;product=SE1561 family protein;protein_id=WP_165806293.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 19385 20521 . + . ID=gene-RM615_RS09700;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=RM615_RS09700;old_locus_tag=RM615_09710 NZ_JAVRJW010000008.1 Protein Homology CDS 19385 20521 . + 0 ID=cds-WP_037575800.1;Parent=gene-RM615_RS09700;Dbxref=GenBank:WP_037575800.1;Name=WP_037575800.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425498.1;locus_tag=RM615_RS09700;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_037575800.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 20589 21116 . - . ID=gene-RM615_RS09705;Name=RM615_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09705;old_locus_tag=RM615_09715 NZ_JAVRJW010000008.1 Protein Homology CDS 20589 21116 . - 0 ID=cds-WP_103159018.1;Parent=gene-RM615_RS09705;Dbxref=GenBank:WP_103159018.1;Name=WP_103159018.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384028.1;locus_tag=RM615_RS09705;product=acyl-CoA thioesterase;protein_id=WP_103159018.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 21135 22364 . - . ID=gene-RM615_RS09710;Name=RM615_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09710;old_locus_tag=RM615_09720 NZ_JAVRJW010000008.1 Protein Homology CDS 21135 22364 . - 0 ID=cds-WP_229717316.1;Parent=gene-RM615_RS09710;Dbxref=GenBank:WP_229717316.1;Name=WP_229717316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469621.1;locus_tag=RM615_RS09710;product=aminopeptidase;protein_id=WP_229717316.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 22395 22604 . - . ID=gene-RM615_RS09715;Name=RM615_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09715;old_locus_tag=RM615_09725 NZ_JAVRJW010000008.1 Protein Homology CDS 22395 22604 . - 0 ID=cds-WP_037575795.1;Parent=gene-RM615_RS09715;Dbxref=GenBank:WP_037575795.1;Name=WP_037575795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169369.1;locus_tag=RM615_RS09715;product=DUF1128 domain-containing protein;protein_id=WP_037575795.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 22737 23195 . + . ID=gene-RM615_RS09720;Name=RM615_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09720;old_locus_tag=RM615_09730 NZ_JAVRJW010000008.1 Protein Homology CDS 22737 23195 . + 0 ID=cds-WP_311541122.1;Parent=gene-RM615_RS09720;Dbxref=GenBank:WP_311541122.1;Name=WP_311541122.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=RM615_RS09720;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_311541122.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 23200 23475 . + . ID=gene-RM615_RS09725;Name=RM615_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09725;old_locus_tag=RM615_09735 NZ_JAVRJW010000008.1 Protein Homology CDS 23200 23475 . + 0 ID=cds-WP_037575789.1;Parent=gene-RM615_RS09725;Dbxref=GenBank:WP_037575789.1;Name=WP_037575789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500587.1;locus_tag=RM615_RS09725;product=YtxH domain-containing protein;protein_id=WP_037575789.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 23601 24869 . + . ID=gene-RM615_RS09730;Name=RM615_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09730;old_locus_tag=RM615_09740 NZ_JAVRJW010000008.1 Protein Homology CDS 23601 24869 . + 0 ID=cds-WP_105963441.1;Parent=gene-RM615_RS09730;Dbxref=GenBank:WP_105963441.1;Name=WP_105963441.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452290.1;locus_tag=RM615_RS09730;product=YihY/virulence factor BrkB family protein;protein_id=WP_105963441.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 24912 25484 . + . ID=gene-RM615_RS09735;Name=RM615_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09735;old_locus_tag=RM615_09745 NZ_JAVRJW010000008.1 Protein Homology CDS 24912 25484 . + 0 ID=cds-WP_103159021.1;Parent=gene-RM615_RS09735;Dbxref=GenBank:WP_103159021.1;Name=WP_103159021.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384034.1;locus_tag=RM615_RS09735;product=beta-class carbonic anhydrase;protein_id=WP_103159021.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 25688 26317 . - . ID=gene-RM615_RS09740;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=RM615_RS09740;old_locus_tag=RM615_09750 NZ_JAVRJW010000008.1 Protein Homology CDS 25688 26317 . - 0 ID=cds-WP_037575783.1;Parent=gene-RM615_RS09740;Dbxref=GenBank:WP_037575783.1;Name=WP_037575783.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=RM615_RS09740;product=response regulator transcription factor VraR;protein_id=WP_037575783.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 26307 27350 . - . ID=gene-RM615_RS09745;Name=RM615_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09745;old_locus_tag=RM615_09755 NZ_JAVRJW010000008.1 Protein Homology CDS 26307 27350 . - 0 ID=cds-WP_037575781.1;Parent=gene-RM615_RS09745;Dbxref=GenBank:WP_037575781.1;Name=WP_037575781.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=RM615_RS09745;product=sensor histidine kinase;protein_id=WP_037575781.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 27347 28048 . - . ID=gene-RM615_RS09750;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=RM615_RS09750;old_locus_tag=RM615_09760 NZ_JAVRJW010000008.1 Protein Homology CDS 27347 28048 . - 0 ID=cds-WP_037575779.1;Parent=gene-RM615_RS09750;Dbxref=GenBank:WP_037575779.1;Name=WP_037575779.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=RM615_RS09750;product=cell wall-active antibiotics response protein VraT;protein_id=WP_037575779.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 28061 28450 . - . ID=gene-RM615_RS09755;Name=RM615_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09755;old_locus_tag=RM615_09765 NZ_JAVRJW010000008.1 GeneMarkS-2+ CDS 28061 28450 . - 0 ID=cds-WP_037575778.1;Parent=gene-RM615_RS09755;Dbxref=GenBank:WP_037575778.1;Name=WP_037575778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS09755;product=hypothetical protein;protein_id=WP_037575778.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 28546 29304 . - . ID=gene-RM615_RS09760;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=RM615_RS09760;old_locus_tag=RM615_09770 NZ_JAVRJW010000008.1 Protein Homology CDS 28546 29304 . - 0 ID=cds-WP_037575776.1;Parent=gene-RM615_RS09760;Dbxref=GenBank:WP_037575776.1;Name=WP_037575776.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425510.1;locus_tag=RM615_RS09760;product=type I methionyl aminopeptidase;protein_id=WP_037575776.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 29636 30646 . + . ID=gene-RM615_RS09765;Name=RM615_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09765;old_locus_tag=RM615_09775 NZ_JAVRJW010000008.1 Protein Homology CDS 29636 30646 . + 0 ID=cds-WP_103159022.1;Parent=gene-RM615_RS09765;Dbxref=GenBank:WP_103159022.1;Name=WP_103159022.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445470.1;locus_tag=RM615_RS09765;product=FUSC family protein;protein_id=WP_103159022.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 30684 31412 . - . ID=gene-RM615_RS09770;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=RM615_RS09770;old_locus_tag=RM615_09780 NZ_JAVRJW010000008.1 Protein Homology CDS 30684 31412 . - 0 ID=cds-WP_103159023.1;Parent=gene-RM615_RS09770;Dbxref=GenBank:WP_103159023.1;Name=WP_103159023.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461344.1;locus_tag=RM615_RS09770;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_103159023.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 31413 32723 . - . ID=gene-RM615_RS09775;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=RM615_RS09775;old_locus_tag=RM615_09785 NZ_JAVRJW010000008.1 Protein Homology CDS 31413 32723 . - 0 ID=cds-WP_311541124.1;Parent=gene-RM615_RS09775;Dbxref=GenBank:WP_311541124.1;Name=WP_311541124.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425517.1;locus_tag=RM615_RS09775;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_311541124.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 32873 33376 . + . ID=gene-RM615_RS09780;Name=RM615_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09780;old_locus_tag=RM615_09790 NZ_JAVRJW010000008.1 Protein Homology CDS 32873 33376 . + 0 ID=cds-WP_037575770.1;Parent=gene-RM615_RS09780;Dbxref=GenBank:WP_037575770.1;Name=WP_037575770.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302773.1;locus_tag=RM615_RS09780;product=ferritin;protein_id=WP_037575770.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 33473 34033 . + . ID=gene-RM615_RS09785;Name=RM615_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09785;old_locus_tag=RM615_09795 NZ_JAVRJW010000008.1 Protein Homology CDS 33473 34033 . + 0 ID=cds-WP_311541125.1;Parent=gene-RM615_RS09785;Dbxref=GenBank:WP_311541125.1;Name=WP_311541125.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487329.1;locus_tag=RM615_RS09785;product=3'-5' exonuclease;protein_id=WP_311541125.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 34028 35098 . - . ID=gene-RM615_RS09790;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=RM615_RS09790;old_locus_tag=RM615_09800 NZ_JAVRJW010000008.1 Protein Homology CDS 34028 35098 . - 0 ID=cds-WP_037575767.1;Parent=gene-RM615_RS09790;Dbxref=GenBank:WP_037575767.1;Name=WP_037575767.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=RM615_RS09790;product=DNA polymerase IV;protein_id=WP_037575767.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 35345 35875 . - . ID=gene-RM615_RS09795;Name=RM615_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09795;old_locus_tag=RM615_09805 NZ_JAVRJW010000008.1 Protein Homology CDS 35345 35875 . - 0 ID=cds-WP_105996931.1;Parent=gene-RM615_RS09795;Dbxref=GenBank:WP_105996931.1;Name=WP_105996931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023096.7;locus_tag=RM615_RS09795;product=DUF3267 domain-containing protein;protein_id=WP_105996931.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 35949 37277 . - . ID=gene-RM615_RS09800;Name=RM615_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09800;old_locus_tag=RM615_09810 NZ_JAVRJW010000008.1 Protein Homology CDS 35949 37277 . - 0 ID=cds-WP_103159025.1;Parent=gene-RM615_RS09800;Dbxref=GenBank:WP_103159025.1;Name=WP_103159025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.7;locus_tag=RM615_RS09800;product=carboxylesterase family protein;protein_id=WP_103159025.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 37292 38656 . - . ID=gene-RM615_RS09805;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=RM615_RS09805;old_locus_tag=RM615_09815 NZ_JAVRJW010000008.1 Protein Homology CDS 37292 38656 . - 0 ID=cds-WP_103159026.1;Parent=gene-RM615_RS09805;Dbxref=GenBank:WP_103159026.1;Name=WP_103159026.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363302.1;locus_tag=RM615_RS09805;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_103159026.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 38747 39679 . - . ID=gene-RM615_RS09810;Name=RM615_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09810;old_locus_tag=RM615_09820 NZ_JAVRJW010000008.1 Protein Homology CDS 38747 39679 . - 0 ID=cds-WP_311541126.1;Parent=gene-RM615_RS09810;Dbxref=GenBank:WP_311541126.1;Name=WP_311541126.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=RM615_RS09810;product=diacylglycerol kinase;protein_id=WP_311541126.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 39970 41397 . - . ID=gene-RM615_RS09815;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=RM615_RS09815;old_locus_tag=RM615_09825 NZ_JAVRJW010000008.1 Protein Homology CDS 39970 41397 . - 0 ID=cds-WP_311541127.1;Parent=gene-RM615_RS09815;Dbxref=GenBank:WP_311541127.1;Name=WP_311541127.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=RM615_RS09815;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_311541127.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 41411 42871 . - . ID=gene-RM615_RS09820;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=RM615_RS09820;old_locus_tag=RM615_09830 NZ_JAVRJW010000008.1 Protein Homology CDS 41411 42871 . - 0 ID=cds-WP_037575760.1;Parent=gene-RM615_RS09820;Dbxref=GenBank:WP_037575760.1;Name=WP_037575760.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=RM615_RS09820;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_037575760.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 42873 43175 . - . ID=gene-RM615_RS09825;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=RM615_RS09825;old_locus_tag=RM615_09835 NZ_JAVRJW010000008.1 Protein Homology CDS 42873 43175 . - 0 ID=cds-WP_037575759.1;Parent=gene-RM615_RS09825;Dbxref=GenBank:WP_037575759.1;Name=WP_037575759.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=RM615_RS09825;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_037575759.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 43752 45296 . + . ID=gene-RM615_RS09830;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=RM615_RS09830;old_locus_tag=RM615_09840 NZ_JAVRJW010000008.1 Protein Homology CDS 43752 45296 . + 0 ID=cds-WP_103159495.1;Parent=gene-RM615_RS09830;Dbxref=GenBank:WP_103159495.1;Name=WP_103159495.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509885.1;locus_tag=RM615_RS09830;product=sodium/proline symporter PutP;protein_id=WP_103159495.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 45396 46589 . - . ID=gene-RM615_RS09835;Name=RM615_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09835;old_locus_tag=RM615_09845 NZ_JAVRJW010000008.1 Protein Homology CDS 45396 46589 . - 0 ID=cds-WP_136732219.1;Parent=gene-RM615_RS09835;Dbxref=GenBank:WP_136732219.1;Name=WP_136732219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499947.1;locus_tag=RM615_RS09835;product=CamS family sex pheromone protein;protein_id=WP_136732219.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 46601 48604 . - . ID=gene-RM615_RS09840;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=RM615_RS09840;old_locus_tag=RM615_09850 NZ_JAVRJW010000008.1 Protein Homology CDS 46601 48604 . - 0 ID=cds-WP_103159496.1;Parent=gene-RM615_RS09840;Dbxref=GenBank:WP_103159496.1;Name=WP_103159496.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477944.1;locus_tag=RM615_RS09840;product=NAD-dependent DNA ligase LigA;protein_id=WP_103159496.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 48605 50794 . - . ID=gene-RM615_RS09845;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=RM615_RS09845;old_locus_tag=RM615_09855 NZ_JAVRJW010000008.1 Protein Homology CDS 48605 50794 . - 0 ID=cds-WP_311541128.1;Parent=gene-RM615_RS09845;Dbxref=GenBank:WP_311541128.1;Name=WP_311541128.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=RM615_RS09845;product=DNA helicase PcrA;protein_id=WP_311541128.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 50794 51483 . - . ID=gene-RM615_RS09850;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=RM615_RS09850;old_locus_tag=RM615_09860 NZ_JAVRJW010000008.1 Protein Homology CDS 50794 51483 . - 0 ID=cds-WP_037575743.1;Parent=gene-RM615_RS09850;Dbxref=GenBank:WP_037575743.1;Name=WP_037575743.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=RM615_RS09850;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_037575743.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 51643 51945 . - . ID=gene-RM615_RS09855;Name=RM615_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09855;old_locus_tag=RM615_09865 NZ_JAVRJW010000008.1 Protein Homology CDS 51643 51945 . - 0 ID=cds-WP_037575741.1;Parent=gene-RM615_RS09855;Dbxref=GenBank:WP_037575741.1;Name=WP_037575741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500616.1;locus_tag=RM615_RS09855;product=YerC/YecD family TrpR-related protein;protein_id=WP_037575741.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 52014 53309 . - . ID=gene-RM615_RS09860;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=RM615_RS09860;old_locus_tag=RM615_09870 NZ_JAVRJW010000008.1 Protein Homology CDS 52014 53309 . - 0 ID=cds-WP_037575739.1;Parent=gene-RM615_RS09860;Dbxref=GenBank:WP_037575739.1;Name=WP_037575739.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500617.1;locus_tag=RM615_RS09860;product=adenylosuccinate lyase;protein_id=WP_037575739.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 53574 53753 . - . ID=gene-RM615_RS09865;Name=RM615_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09865;old_locus_tag=RM615_09875 NZ_JAVRJW010000008.1 Protein Homology CDS 53574 53753 . - 0 ID=cds-WP_037575736.1;Parent=gene-RM615_RS09865;Dbxref=GenBank:WP_037575736.1;Name=WP_037575736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384058.1;locus_tag=RM615_RS09865;product=NETI motif-containing protein;protein_id=WP_037575736.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 53743 54312 . - . ID=gene-RM615_RS09870;Name=RM615_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09870;old_locus_tag=RM615_09880 NZ_JAVRJW010000008.1 Protein Homology CDS 53743 54312 . - 0 ID=cds-WP_311541129.1;Parent=gene-RM615_RS09870;Dbxref=GenBank:WP_311541129.1;Name=WP_311541129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=RM615_RS09870;product=DUF2179 domain-containing protein;protein_id=WP_311541129.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 54381 55202 . - . ID=gene-RM615_RS09875;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=RM615_RS09875;old_locus_tag=RM615_09885 NZ_JAVRJW010000008.1 Protein Homology CDS 54381 55202 . - 0 ID=cds-WP_311541130.1;Parent=gene-RM615_RS09875;Dbxref=GenBank:WP_311541130.1;Name=WP_311541130.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275346.1;locus_tag=RM615_RS09875;product=NAD(+) synthase;protein_id=WP_311541130.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 55195 56664 . - . ID=gene-RM615_RS09880;Name=RM615_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09880;old_locus_tag=RM615_09890 NZ_JAVRJW010000008.1 Protein Homology CDS 55195 56664 . - 0 ID=cds-WP_037575729.1;Parent=gene-RM615_RS09880;Dbxref=GenBank:WP_037575729.1;Name=WP_037575729.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=RM615_RS09880;product=nicotinate phosphoribosyltransferase;protein_id=WP_037575729.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 56825 57895 . + . ID=gene-RM615_RS09885;Name=RM615_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09885;old_locus_tag=RM615_09895 NZ_JAVRJW010000008.1 Protein Homology CDS 56825 57895 . + 0 ID=cds-WP_311541131.1;Parent=gene-RM615_RS09885;Dbxref=GenBank:WP_311541131.1;Name=WP_311541131.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=RM615_RS09885;product=nitric oxide synthase oxygenase;protein_id=WP_311541131.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 57939 58730 . + . ID=gene-RM615_RS09890;Name=RM615_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09890;old_locus_tag=RM615_09900 NZ_JAVRJW010000008.1 Protein Homology CDS 57939 58730 . + 0 ID=cds-WP_037575723.1;Parent=gene-RM615_RS09890;Dbxref=GenBank:WP_037575723.1;Name=WP_037575723.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169333.1;locus_tag=RM615_RS09890;product=prephenate dehydratase;protein_id=WP_037575723.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 58968 60071 . - . ID=gene-RM615_RS09895;Name=RM615_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09895;old_locus_tag=RM615_09905 NZ_JAVRJW010000008.1 Protein Homology CDS 58968 60071 . - 0 ID=cds-WP_105963436.1;Parent=gene-RM615_RS09895;Dbxref=GenBank:WP_105963436.1;Name=WP_105963436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425542.1;locus_tag=RM615_RS09895;product=glycosyl hydrolase family 28-related protein;protein_id=WP_105963436.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 60154 60705 . + . ID=gene-RM615_RS09900;Name=RM615_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09900;old_locus_tag=RM615_09910 NZ_JAVRJW010000008.1 Protein Homology CDS 60154 60705 . + 0 ID=cds-WP_037575718.1;Parent=gene-RM615_RS09900;Dbxref=GenBank:WP_037575718.1;Name=WP_037575718.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=RM615_RS09900;product=cysteine hydrolase family protein;protein_id=WP_037575718.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 60768 61691 . + . ID=gene-RM615_RS09905;Name=RM615_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09905;old_locus_tag=RM615_09915 NZ_JAVRJW010000008.1 Protein Homology CDS 60768 61691 . + 0 ID=cds-WP_037575715.1;Parent=gene-RM615_RS09905;Dbxref=GenBank:WP_037575715.1;Name=WP_037575715.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169330.1;locus_tag=RM615_RS09905;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_037575715.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 61711 61998 . + . ID=gene-RM615_RS09910;Name=RM615_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09910;old_locus_tag=RM615_09920 NZ_JAVRJW010000008.1 Protein Homology CDS 61711 61998 . + 0 ID=cds-WP_037575714.1;Parent=gene-RM615_RS09910;Dbxref=GenBank:WP_037575714.1;Name=WP_037575714.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384068.1;locus_tag=RM615_RS09910;product=GNAT family N-acetyltransferase;protein_id=WP_037575714.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 62198 63580 . + . ID=gene-RM615_RS09915;Name=RM615_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09915;old_locus_tag=RM615_09925 NZ_JAVRJW010000008.1 Protein Homology CDS 62198 63580 . + 0 ID=cds-WP_311541132.1;Parent=gene-RM615_RS09915;Dbxref=GenBank:WP_311541132.1;Name=WP_311541132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900735.1;locus_tag=RM615_RS09915;product=aldehyde dehydrogenase;protein_id=WP_311541132.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 63876 64916 . - . ID=gene-RM615_RS09920;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=RM615_RS09920;old_locus_tag=RM615_09930 NZ_JAVRJW010000008.1 Protein Homology CDS 63876 64916 . - 0 ID=cds-WP_311541133.1;Parent=gene-RM615_RS09920;Dbxref=GenBank:WP_311541133.1;Name=WP_311541133.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302748.1;locus_tag=RM615_RS09920;product=6-phosphogluconolactonase;protein_id=WP_311541133.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 64989 65558 . - . ID=gene-RM615_RS09925;Name=RM615_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09925;old_locus_tag=RM615_09935 NZ_JAVRJW010000008.1 GeneMarkS-2+ CDS 64989 65558 . - 0 ID=cds-WP_037575707.1;Parent=gene-RM615_RS09925;Dbxref=GenBank:WP_037575707.1;Name=WP_037575707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS09925;product=hypothetical protein;protein_id=WP_037575707.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 65688 65861 . - . ID=gene-RM615_RS09930;Name=RM615_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09930;old_locus_tag=RM615_09940 NZ_JAVRJW010000008.1 Protein Homology CDS 65688 65861 . - 0 ID=cds-WP_165806299.1;Parent=gene-RM615_RS09930;Dbxref=GenBank:WP_165806299.1;Name=WP_165806299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461390.1;locus_tag=RM615_RS09930;product=hypothetical protein;protein_id=WP_165806299.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 66033 66416 . + . ID=gene-RM615_RS09935;Name=RM615_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09935;old_locus_tag=RM615_09945 NZ_JAVRJW010000008.1 Protein Homology CDS 66033 66416 . + 0 ID=cds-WP_037575705.1;Parent=gene-RM615_RS09935;Dbxref=GenBank:WP_037575705.1;Name=WP_037575705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=RM615_RS09935;product=hypothetical protein;protein_id=WP_037575705.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 66694 67734 . + . ID=gene-RM615_RS09940;Name=RM615_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09940;old_locus_tag=RM615_09950 NZ_JAVRJW010000008.1 Protein Homology CDS 66694 67734 . + 0 ID=cds-WP_311541134.1;Parent=gene-RM615_RS09940;Dbxref=GenBank:WP_311541134.1;Name=WP_311541134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188079.1;locus_tag=RM615_RS09940;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_311541134.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 67785 68627 . - . ID=gene-RM615_RS09945;Name=RM615_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09945;old_locus_tag=RM615_09955 NZ_JAVRJW010000008.1 Protein Homology CDS 67785 68627 . - 0 ID=cds-WP_037575702.1;Parent=gene-RM615_RS09945;Dbxref=GenBank:WP_037575702.1;Name=WP_037575702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024743.7;locus_tag=RM615_RS09945;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_037575702.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 68624 69187 . - . ID=gene-RM615_RS09950;Name=RM615_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09950;old_locus_tag=RM615_09960 NZ_JAVRJW010000008.1 Protein Homology CDS 68624 69187 . - 0 ID=cds-WP_037575700.1;Parent=gene-RM615_RS09950;Dbxref=GenBank:WP_037575700.1;Name=WP_037575700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=RM615_RS09950;product=HAAS signaling domain-containing protein;protein_id=WP_037575700.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 69373 69927 . + . ID=gene-RM615_RS09955;Name=RM615_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09955;old_locus_tag=RM615_09965 NZ_JAVRJW010000008.1 Protein Homology CDS 69373 69927 . + 0 ID=cds-WP_037575698.1;Parent=gene-RM615_RS09955;Dbxref=GenBank:WP_037575698.1;Name=WP_037575698.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170608.1;locus_tag=RM615_RS09955;product=thioredoxin family protein;protein_id=WP_037575698.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 70125 70538 . - . ID=gene-RM615_RS09960;Name=RM615_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09960;old_locus_tag=RM615_09970 NZ_JAVRJW010000008.1 Protein Homology CDS 70125 70538 . - 0 ID=cds-WP_311541135.1;Parent=gene-RM615_RS09960;Dbxref=GenBank:WP_311541135.1;Name=WP_311541135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=RM615_RS09960;product=DUF2188 domain-containing protein;protein_id=WP_311541135.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 70579 71940 . - . ID=gene-RM615_RS09965;Name=RM615_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09965;old_locus_tag=RM615_09975 NZ_JAVRJW010000008.1 Protein Homology CDS 70579 71940 . - 0 ID=cds-WP_103158755.1;Parent=gene-RM615_RS09965;Dbxref=GenBank:WP_103158755.1;Name=WP_103158755.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=RM615_RS09965;product=gluconate:H+ symporter;protein_id=WP_103158755.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 71955 73487 . - . ID=gene-RM615_RS09970;Name=RM615_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09970;old_locus_tag=RM615_09980 NZ_JAVRJW010000008.1 Protein Homology CDS 71955 73487 . - 0 ID=cds-WP_311541136.1;Parent=gene-RM615_RS09970;Dbxref=GenBank:WP_311541136.1;Name=WP_311541136.1;Ontology_term=GO:0016310,GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=phosphorylation|0016310||IEA,obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425556.1;locus_tag=RM615_RS09970;product=gluconokinase;protein_id=WP_311541136.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 73510 74184 . - . ID=gene-RM615_RS09975;Name=RM615_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09975;old_locus_tag=RM615_09985 NZ_JAVRJW010000008.1 Protein Homology CDS 73510 74184 . - 0 ID=cds-WP_037575693.1;Parent=gene-RM615_RS09975;Dbxref=GenBank:WP_037575693.1;Name=WP_037575693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=RM615_RS09975;product=GntR family transcriptional regulator;protein_id=WP_037575693.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 74365 75093 . - . ID=gene-RM615_RS09980;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=RM615_RS09980;old_locus_tag=RM615_09990 NZ_JAVRJW010000008.1 Protein Homology CDS 74365 75093 . - 0 ID=cds-WP_037575691.1;Parent=gene-RM615_RS09980;Dbxref=GenBank:WP_037575691.1;Name=WP_037575691.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425558.1;locus_tag=RM615_RS09980;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_037575691.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 75093 75965 . - . ID=gene-RM615_RS09985;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=RM615_RS09985;old_locus_tag=RM615_09995 NZ_JAVRJW010000008.1 Protein Homology CDS 75093 75965 . - 0 ID=cds-WP_037575689.1;Parent=gene-RM615_RS09985;Dbxref=GenBank:WP_037575689.1;Name=WP_037575689.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466134.1;locus_tag=RM615_RS09985;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_037575689.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 76661 76957 . - . ID=gene-RM615_RS09990;Name=RM615_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09990;old_locus_tag=RM615_10000 NZ_JAVRJW010000008.1 Protein Homology CDS 76661 76957 . - 0 ID=cds-WP_258026739.1;Parent=gene-RM615_RS09990;Dbxref=GenBank:WP_258026739.1;Name=WP_258026739.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469536.1;locus_tag=RM615_RS09990;product=GntR family transcriptional regulator;protein_id=WP_258026739.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 77257 77433 . - . ID=gene-RM615_RS09995;Name=RM615_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS09995;old_locus_tag=RM615_10005 NZ_JAVRJW010000008.1 Protein Homology CDS 77257 77433 . - 0 ID=cds-WP_037575851.1;Parent=gene-RM615_RS09995;Dbxref=GenBank:WP_037575851.1;Name=WP_037575851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385021.1;locus_tag=RM615_RS09995;product=SE1626 family protein;protein_id=WP_037575851.1;transl_table=11 NZ_JAVRJW010000008.1 RefSeq gene 77593 78699 . + . ID=gene-RM615_RS10000;Name=RM615_RS10000;end_range=78699,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10000;old_locus_tag=RM615_10010;partial=true NZ_JAVRJW010000008.1 Protein Homology CDS 77593 78699 . + 0 ID=cds-WP_311541137.1;Parent=gene-RM615_RS10000;Dbxref=GenBank:WP_311541137.1;Name=WP_311541137.1;Ontology_term=GO:0009058,GO:0030170;end_range=78699,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068529.1;locus_tag=RM615_RS10000;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311541137.1;transl_table=11 ##sequence-region NZ_JAVRJW010000009.1 1 58052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126 NZ_JAVRJW010000009.1 RefSeq region 1 58052 . + . ID=NZ_JAVRJW010000009.1:1..58052;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST150 NZ_JAVRJW010000009.1 RefSeq pseudogene 1 1226 . + . ID=gene-RM615_RS10005;Name=RM615_RS10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10005;old_locus_tag=RM615_10015;partial=true;pseudo=true;start_range=.,1 NZ_JAVRJW010000009.1 GeneMarkS-2+ CDS 1 1226 . + 2 ID=cds-RM615_RS10005;Parent=gene-RM615_RS10005;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10005;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 1806 1952 . + . ID=gene-RM615_RS10010;Name=RM615_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10010;old_locus_tag=RM615_10020 NZ_JAVRJW010000009.1 GeneMarkS-2+ CDS 1806 1952 . + 0 ID=cds-WP_311539403.1;Parent=gene-RM615_RS10010;Dbxref=GenBank:WP_311539403.1;Name=WP_311539403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10010;product=hypothetical protein;protein_id=WP_311539403.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq pseudogene 2423 2560 . - . ID=gene-RM615_RS11210;Name=RM615_RS11210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS11210;partial=true;pseudo=true;start_range=.,2423 NZ_JAVRJW010000009.1 Protein Homology CDS 2423 2560 . - 0 ID=cds-RM615_RS11210;Parent=gene-RM615_RS11210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040237.6;locus_tag=RM615_RS11210;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;pseudo=true;start_range=.,2423;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 3549 5141 . + . ID=gene-RM615_RS10015;Name=RM615_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10015;old_locus_tag=RM615_10025 NZ_JAVRJW010000009.1 Protein Homology CDS 3549 5141 . + 0 ID=cds-WP_037576651.1;Parent=gene-RM615_RS10015;Dbxref=GenBank:WP_037576651.1;Name=WP_037576651.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506551.1;locus_tag=RM615_RS10015;product=L-lactate permease;protein_id=WP_037576651.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 5188 5868 . - . ID=gene-RM615_RS10020;Name=RM615_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10020;old_locus_tag=RM615_10030 NZ_JAVRJW010000009.1 Protein Homology CDS 5188 5868 . - 0 ID=cds-WP_103159538.1;Parent=gene-RM615_RS10020;Dbxref=GenBank:WP_103159538.1;Name=WP_103159538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723561.1;locus_tag=RM615_RS10020;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_103159538.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 5861 6973 . - . ID=gene-RM615_RS10025;Name=RM615_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10025;old_locus_tag=RM615_10035 NZ_JAVRJW010000009.1 Protein Homology CDS 5861 6973 . - 0 ID=cds-WP_311541138.1;Parent=gene-RM615_RS10025;Dbxref=GenBank:WP_311541138.1;Name=WP_311541138.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012382.7;locus_tag=RM615_RS10025;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311541138.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 6975 8324 . - . ID=gene-RM615_RS10030;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=RM615_RS10030;old_locus_tag=RM615_10040 NZ_JAVRJW010000009.1 Protein Homology CDS 6975 8324 . - 0 ID=cds-WP_311541139.1;Parent=gene-RM615_RS10030;Dbxref=GenBank:WP_311541139.1;Name=WP_311541139.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=RM615_RS10030;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_311541139.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 8299 8991 . - . ID=gene-RM615_RS10035;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=RM615_RS10035;old_locus_tag=RM615_10045 NZ_JAVRJW010000009.1 Protein Homology CDS 8299 8991 . - 0 ID=cds-WP_311541140.1;Parent=gene-RM615_RS10035;Dbxref=GenBank:WP_311541140.1;Name=WP_311541140.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=RM615_RS10035;product=dethiobiotin synthase;protein_id=WP_311541140.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 9243 10565 . + . ID=gene-RM615_RS10040;Name=RM615_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10040;old_locus_tag=RM615_10050 NZ_JAVRJW010000009.1 Protein Homology CDS 9243 10565 . + 0 ID=cds-WP_105963005.1;Parent=gene-RM615_RS10040;Dbxref=GenBank:WP_105963005.1;Name=WP_105963005.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498867.1;locus_tag=RM615_RS10040;product=Nramp family divalent metal transporter;protein_id=WP_105963005.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 10752 11174 . + . ID=gene-RM615_RS10045;Name=RM615_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10045;old_locus_tag=RM615_10055 NZ_JAVRJW010000009.1 Protein Homology CDS 10752 11174 . + 0 ID=cds-WP_311541141.1;Parent=gene-RM615_RS10045;Dbxref=GenBank:WP_311541141.1;Name=WP_311541141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=RM615_RS10045;product=Hsp20/alpha crystallin family protein;protein_id=WP_311541141.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 11260 11901 . - . ID=gene-RM615_RS10050;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=RM615_RS10050;old_locus_tag=RM615_10060 NZ_JAVRJW010000009.1 Protein Homology CDS 11260 11901 . - 0 ID=cds-WP_311541142.1;Parent=gene-RM615_RS10050;Dbxref=GenBank:WP_311541142.1;Name=WP_311541142.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016129688.1;locus_tag=RM615_RS10050;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_311541142.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 12858 14441 . - . ID=gene-RM615_RS10055;Name=mbcS;gbkey=Gene;gene=mbcS;gene_biotype=protein_coding;locus_tag=RM615_RS10055;old_locus_tag=RM615_10065 NZ_JAVRJW010000009.1 Protein Homology CDS 12858 14441 . - 0 ID=cds-WP_311541143.1;Parent=gene-RM615_RS10055;Dbxref=GenBank:WP_311541143.1;Name=WP_311541143.1;gbkey=CDS;gene=mbcS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505544.1;locus_tag=RM615_RS10055;product=acyl-CoA synthetase MbcS;protein_id=WP_311541143.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 15318 15638 . + . ID=gene-RM615_RS10060;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=RM615_RS10060;old_locus_tag=RM615_10070 NZ_JAVRJW010000009.1 Protein Homology CDS 15318 15638 . + 0 ID=cds-WP_311541144.1;Parent=gene-RM615_RS10060;Dbxref=GenBank:WP_311541144.1;Name=WP_311541144.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166845.1;locus_tag=RM615_RS10060;product=SPIN family peroxidase inhibitor;protein_id=WP_311541144.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 15874 16500 . + . ID=gene-RM615_RS10065;Name=RM615_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10065;old_locus_tag=RM615_10075 NZ_JAVRJW010000009.1 Protein Homology CDS 15874 16500 . + 0 ID=cds-WP_037576676.1;Parent=gene-RM615_RS10065;Dbxref=GenBank:WP_037576676.1;Name=WP_037576676.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=RM615_RS10065;product=FMN-dependent NADH-azoreductase;protein_id=WP_037576676.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 16546 18528 . - . ID=gene-RM615_RS10070;Name=RM615_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10070;old_locus_tag=RM615_10080 NZ_JAVRJW010000009.1 Protein Homology CDS 16546 18528 . - 0 ID=cds-WP_105967361.1;Parent=gene-RM615_RS10070;Dbxref=GenBank:WP_105967361.1;Name=WP_105967361.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656191.1;locus_tag=RM615_RS10070;product=ABC transporter permease;protein_id=WP_105967361.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 18530 19279 . - . ID=gene-RM615_RS10075;Name=RM615_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10075;old_locus_tag=RM615_10085 NZ_JAVRJW010000009.1 Protein Homology CDS 18530 19279 . - 0 ID=cds-WP_037576681.1;Parent=gene-RM615_RS10075;Dbxref=GenBank:WP_037576681.1;Name=WP_037576681.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382394.1;locus_tag=RM615_RS10075;product=ABC transporter ATP-binding protein;protein_id=WP_037576681.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 19369 20259 . - . ID=gene-RM615_RS10080;Name=RM615_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10080;old_locus_tag=RM615_10090 NZ_JAVRJW010000009.1 Protein Homology CDS 19369 20259 . - 0 ID=cds-WP_233650140.1;Parent=gene-RM615_RS10080;Dbxref=GenBank:WP_233650140.1;Name=WP_233650140.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492577.1;locus_tag=RM615_RS10080;product=sensor histidine kinase;protein_id=WP_233650140.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 20288 20953 . - . ID=gene-RM615_RS10085;Name=RM615_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10085;old_locus_tag=RM615_10095 NZ_JAVRJW010000009.1 Protein Homology CDS 20288 20953 . - 0 ID=cds-WP_037576682.1;Parent=gene-RM615_RS10085;Dbxref=GenBank:WP_037576682.1;Name=WP_037576682.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363890.1;locus_tag=RM615_RS10085;product=response regulator transcription factor;protein_id=WP_037576682.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 21084 21521 . + . ID=gene-RM615_RS10090;Name=RM615_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10090;old_locus_tag=RM615_10100 NZ_JAVRJW010000009.1 Protein Homology CDS 21084 21521 . + 0 ID=cds-WP_228514805.1;Parent=gene-RM615_RS10090;Dbxref=GenBank:WP_228514805.1;Name=WP_228514805.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507130.1;locus_tag=RM615_RS10090;product=VOC family protein;protein_id=WP_228514805.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 21581 22483 . - . ID=gene-RM615_RS10095;Name=RM615_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10095;old_locus_tag=RM615_10105 NZ_JAVRJW010000009.1 Protein Homology CDS 21581 22483 . - 0 ID=cds-WP_107367998.1;Parent=gene-RM615_RS10095;Dbxref=GenBank:WP_107367998.1;Name=WP_107367998.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025854.7;locus_tag=RM615_RS10095;product=sensor histidine kinase;protein_id=WP_107367998.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 22506 23255 . - . ID=gene-RM615_RS10100;Name=RM615_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10100;old_locus_tag=RM615_10110 NZ_JAVRJW010000009.1 GeneMarkS-2+ CDS 22506 23255 . - 0 ID=cds-WP_107367999.1;Parent=gene-RM615_RS10100;Dbxref=GenBank:WP_107367999.1;Name=WP_107367999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM615_RS10100;product=hypothetical protein;protein_id=WP_107367999.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 23255 24163 . - . ID=gene-RM615_RS10105;Name=RM615_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10105;old_locus_tag=RM615_10115 NZ_JAVRJW010000009.1 Protein Homology CDS 23255 24163 . - 0 ID=cds-WP_311539390.1;Parent=gene-RM615_RS10105;Dbxref=GenBank:WP_311539390.1;Name=WP_311539390.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444826.1;locus_tag=RM615_RS10105;product=ABC transporter ATP-binding protein;protein_id=WP_311539390.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 24246 24914 . - . ID=gene-RM615_RS10110;Name=RM615_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10110;old_locus_tag=RM615_10120 NZ_JAVRJW010000009.1 Protein Homology CDS 24246 24914 . - 0 ID=cds-WP_311541145.1;Parent=gene-RM615_RS10110;Dbxref=GenBank:WP_311541145.1;Name=WP_311541145.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466597.1;locus_tag=RM615_RS10110;product=response regulator transcription factor;protein_id=WP_311541145.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 25010 26173 . - . ID=gene-RM615_RS10115;Name=RM615_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10115;old_locus_tag=RM615_10125 NZ_JAVRJW010000009.1 Protein Homology CDS 25010 26173 . - 0 ID=cds-WP_107368001.1;Parent=gene-RM615_RS10115;Dbxref=GenBank:WP_107368001.1;Name=WP_107368001.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482272.1;locus_tag=RM615_RS10115;product=amidohydrolase;protein_id=WP_107368001.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 26275 26823 . - . ID=gene-RM615_RS10120;Name=RM615_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10120;old_locus_tag=RM615_10130 NZ_JAVRJW010000009.1 Protein Homology CDS 26275 26823 . - 0 ID=cds-WP_103159545.1;Parent=gene-RM615_RS10120;Dbxref=GenBank:WP_103159545.1;Name=WP_103159545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901526.1;locus_tag=RM615_RS10120;product=DUF4064 domain-containing protein;protein_id=WP_103159545.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 27418 28803 . + . ID=gene-RM615_RS10125;Name=RM615_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10125;old_locus_tag=RM615_10135 NZ_JAVRJW010000009.1 Protein Homology CDS 27418 28803 . + 0 ID=cds-WP_311541146.1;Parent=gene-RM615_RS10125;Dbxref=GenBank:WP_311541146.1;Name=WP_311541146.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471872.1;locus_tag=RM615_RS10125;product=amino acid permease;protein_id=WP_311541146.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 29181 29681 . + . ID=gene-RM615_RS10130;Name=RM615_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10130;old_locus_tag=RM615_10140 NZ_JAVRJW010000009.1 Protein Homology CDS 29181 29681 . + 0 ID=cds-WP_037576695.1;Parent=gene-RM615_RS10130;Dbxref=GenBank:WP_037576695.1;Name=WP_037576695.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664111.1;locus_tag=RM615_RS10130;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_037576695.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 29842 31335 . + . ID=gene-RM615_RS10135;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM615_RS10135;old_locus_tag=RM615_10145 NZ_JAVRJW010000009.1 Protein Homology CDS 29842 31335 . + 0 ID=cds-WP_105986768.1;Parent=gene-RM615_RS10135;Dbxref=GenBank:WP_105986768.1;Name=WP_105986768.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=RM615_RS10135;product=L-lactate dehydrogenase (quinone);protein_id=WP_105986768.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 31353 31463 . + . ID=gene-RM615_RS10140;Name=RM615_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10140;old_locus_tag=RM615_10150 NZ_JAVRJW010000009.1 Protein Homology CDS 31353 31463 . + 0 ID=cds-WP_069191690.1;Parent=gene-RM615_RS10140;Dbxref=GenBank:WP_069191690.1;Name=WP_069191690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468545.1;locus_tag=RM615_RS10140;product=SE2200 family small protein;protein_id=WP_069191690.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 31540 32709 . - . ID=gene-RM615_RS10145;Name=RM615_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10145;old_locus_tag=RM615_10155 NZ_JAVRJW010000009.1 Protein Homology CDS 31540 32709 . - 0 ID=cds-WP_037576700.1;Parent=gene-RM615_RS10145;Dbxref=GenBank:WP_037576700.1;Name=WP_037576700.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434998.1;locus_tag=RM615_RS10145;product=MFS transporter;protein_id=WP_037576700.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 33019 33477 . + . ID=gene-RM615_RS10150;Name=RM615_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10150;old_locus_tag=RM615_10160 NZ_JAVRJW010000009.1 Protein Homology CDS 33019 33477 . + 0 ID=cds-WP_037576704.1;Parent=gene-RM615_RS10150;Dbxref=GenBank:WP_037576704.1;Name=WP_037576704.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: protein motif:HMM:NF014864.7;locus_tag=RM615_RS10150;product=arginine repressor;protein_id=WP_037576704.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 33719 34945 . + . ID=gene-RM615_RS10155;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=RM615_RS10155;old_locus_tag=RM615_10165 NZ_JAVRJW010000009.1 Protein Homology CDS 33719 34945 . + 0 ID=cds-WP_037576707.1;Parent=gene-RM615_RS10155;Dbxref=GenBank:WP_037576707.1;Name=WP_037576707.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175479.1;locus_tag=RM615_RS10155;product=arginine deiminase;protein_id=WP_037576707.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 34969 35976 . + . ID=gene-RM615_RS10160;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM615_RS10160;old_locus_tag=RM615_10170 NZ_JAVRJW010000009.1 Protein Homology CDS 34969 35976 . + 0 ID=cds-WP_103159155.1;Parent=gene-RM615_RS10160;Dbxref=GenBank:WP_103159155.1;Name=WP_103159155.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165722.1;locus_tag=RM615_RS10160;product=ornithine carbamoyltransferase;protein_id=WP_103159155.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 36073 37491 . + . ID=gene-RM615_RS10165;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=RM615_RS10165;old_locus_tag=RM615_10175 NZ_JAVRJW010000009.1 Protein Homology CDS 36073 37491 . + 0 ID=cds-WP_103159154.1;Parent=gene-RM615_RS10165;Dbxref=GenBank:WP_103159154.1;Name=WP_103159154.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464536.1;locus_tag=RM615_RS10165;product=arginine-ornithine antiporter;protein_id=WP_103159154.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 37508 38449 . + . ID=gene-RM615_RS10170;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=RM615_RS10170;old_locus_tag=RM615_10180 NZ_JAVRJW010000009.1 Protein Homology CDS 37508 38449 . + 0 ID=cds-WP_105965789.1;Parent=gene-RM615_RS10170;Dbxref=GenBank:WP_105965789.1;Name=WP_105965789.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660031.1;locus_tag=RM615_RS10170;product=carbamate kinase;protein_id=WP_105965789.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 38471 39175 . + . ID=gene-RM615_RS10175;Name=RM615_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10175;old_locus_tag=RM615_10185 NZ_JAVRJW010000009.1 Protein Homology CDS 38471 39175 . + 0 ID=cds-WP_051605016.1;Parent=gene-RM615_RS10175;Dbxref=GenBank:WP_051605016.1;Name=WP_051605016.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM615_RS10175;product=Crp/Fnr family transcriptional regulator;protein_id=WP_051605016.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 39265 40614 . - . ID=gene-RM615_RS10180;Name=RM615_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10180;old_locus_tag=RM615_10190 NZ_JAVRJW010000009.1 Protein Homology CDS 39265 40614 . - 0 ID=cds-WP_037576717.1;Parent=gene-RM615_RS10180;Dbxref=GenBank:WP_037576717.1;Name=WP_037576717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=RM615_RS10180;product=nucleoside recognition domain-containing protein;protein_id=WP_037576717.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 40608 41717 . - . ID=gene-RM615_RS10185;Name=RM615_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10185;old_locus_tag=RM615_10195 NZ_JAVRJW010000009.1 Protein Homology CDS 40608 41717 . - 0 ID=cds-WP_037576719.1;Parent=gene-RM615_RS10185;Dbxref=GenBank:WP_037576719.1;Name=WP_037576719.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466314.1;locus_tag=RM615_RS10185;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037576719.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 41866 42624 . - . ID=gene-RM615_RS10190;Name=RM615_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10190;old_locus_tag=RM615_10200 NZ_JAVRJW010000009.1 Protein Homology CDS 41866 42624 . - 0 ID=cds-WP_037576721.1;Parent=gene-RM615_RS10190;Dbxref=GenBank:WP_037576721.1;Name=WP_037576721.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464138.1;locus_tag=RM615_RS10190;product=alpha/beta hydrolase;protein_id=WP_037576721.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 42640 43317 . - . ID=gene-RM615_RS10195;Name=RM615_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10195;old_locus_tag=RM615_10205 NZ_JAVRJW010000009.1 Protein Homology CDS 42640 43317 . - 0 ID=cds-WP_037576723.1;Parent=gene-RM615_RS10195;Dbxref=GenBank:WP_037576723.1;Name=WP_037576723.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470117.1;locus_tag=RM615_RS10195;product=ABC transporter permease;protein_id=WP_037576723.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 43317 44258 . - . ID=gene-RM615_RS10200;Name=RM615_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10200;old_locus_tag=RM615_10210 NZ_JAVRJW010000009.1 Protein Homology CDS 43317 44258 . - 0 ID=cds-WP_037576725.1;Parent=gene-RM615_RS10200;Dbxref=GenBank:WP_037576725.1;Name=WP_037576725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302416.1;locus_tag=RM615_RS10200;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_037576725.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 44276 44911 . - . ID=gene-RM615_RS10205;Name=RM615_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10205;old_locus_tag=RM615_10215 NZ_JAVRJW010000009.1 Protein Homology CDS 44276 44911 . - 0 ID=cds-WP_037576728.1;Parent=gene-RM615_RS10205;Dbxref=GenBank:WP_037576728.1;Name=WP_037576728.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471024.1;locus_tag=RM615_RS10205;product=ABC transporter permease;protein_id=WP_037576728.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 44908 46104 . - . ID=gene-RM615_RS10210;Name=RM615_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10210;old_locus_tag=RM615_10220 NZ_JAVRJW010000009.1 Protein Homology CDS 44908 46104 . - 0 ID=cds-WP_037576731.1;Parent=gene-RM615_RS10210;Dbxref=GenBank:WP_037576731.1;Name=WP_037576731.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473374.1;locus_tag=RM615_RS10210;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_037576731.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 46457 46993 . - . ID=gene-RM615_RS10215;Name=RM615_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10215;old_locus_tag=RM615_10225 NZ_JAVRJW010000009.1 Protein Homology CDS 46457 46993 . - 0 ID=cds-WP_103159146.1;Parent=gene-RM615_RS10215;Dbxref=GenBank:WP_103159146.1;Name=WP_103159146.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898483.1;locus_tag=RM615_RS10215;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103159146.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 47187 47906 . - . ID=gene-RM615_RS10220;Name=RM615_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10220;old_locus_tag=RM615_10230 NZ_JAVRJW010000009.1 Protein Homology CDS 47187 47906 . - 0 ID=cds-WP_037576738.1;Parent=gene-RM615_RS10220;Dbxref=GenBank:WP_037576738.1;Name=WP_037576738.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.7;locus_tag=RM615_RS10220;product=DUF3169 family protein;protein_id=WP_037576738.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 47903 48106 . - . ID=gene-RM615_RS10225;Name=RM615_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10225;old_locus_tag=RM615_10235 NZ_JAVRJW010000009.1 Protein Homology CDS 47903 48106 . - 0 ID=cds-WP_037576741.1;Parent=gene-RM615_RS10225;Dbxref=GenBank:WP_037576741.1;Name=WP_037576741.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=RM615_RS10225;product=helix-turn-helix transcriptional regulator;protein_id=WP_037576741.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 48232 49425 . - . ID=gene-RM615_RS10230;Name=RM615_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10230;old_locus_tag=RM615_10240 NZ_JAVRJW010000009.1 Protein Homology CDS 48232 49425 . - 0 ID=cds-WP_037576743.1;Parent=gene-RM615_RS10230;Dbxref=GenBank:WP_037576743.1;Name=WP_037576743.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006637724.1;locus_tag=RM615_RS10230;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037576743.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 49595 50203 . + . ID=gene-RM615_RS10235;Name=RM615_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10235;old_locus_tag=RM615_10245 NZ_JAVRJW010000009.1 Protein Homology CDS 49595 50203 . + 0 ID=cds-WP_037576746.1;Parent=gene-RM615_RS10235;Dbxref=GenBank:WP_037576746.1;Name=WP_037576746.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506433.1;locus_tag=RM615_RS10235;product=class I SAM-dependent methyltransferase;protein_id=WP_037576746.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 50362 51744 . - . ID=gene-RM615_RS10240;Name=RM615_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10240;old_locus_tag=RM615_10250 NZ_JAVRJW010000009.1 Protein Homology CDS 50362 51744 . - 0 ID=cds-WP_037576749.1;Parent=gene-RM615_RS10240;Dbxref=GenBank:WP_037576749.1;Name=WP_037576749.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479375.1;locus_tag=RM615_RS10240;product=cryptochrome/photolyase family protein;protein_id=WP_037576749.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 51954 52454 . - . ID=gene-RM615_RS10245;Name=RM615_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10245;old_locus_tag=RM615_10255 NZ_JAVRJW010000009.1 Protein Homology CDS 51954 52454 . - 0 ID=cds-WP_051605017.1;Parent=gene-RM615_RS10245;Dbxref=GenBank:WP_051605017.1;Name=WP_051605017.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM615_RS10245;product=DUF805 domain-containing protein;protein_id=WP_051605017.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 52641 53138 . - . ID=gene-RM615_RS10250;Name=RM615_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10250;old_locus_tag=RM615_10260 NZ_JAVRJW010000009.1 Protein Homology CDS 52641 53138 . - 0 ID=cds-WP_037576752.1;Parent=gene-RM615_RS10250;Dbxref=GenBank:WP_037576752.1;Name=WP_037576752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM615_RS10250;product=DUF805 domain-containing protein;protein_id=WP_037576752.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 53208 54245 . - . ID=gene-RM615_RS10255;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=RM615_RS10255;old_locus_tag=RM615_10265 NZ_JAVRJW010000009.1 Protein Homology CDS 53208 54245 . - 0 ID=cds-WP_037576755.1;Parent=gene-RM615_RS10255;Dbxref=GenBank:WP_037576755.1;Name=WP_037576755.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449326.1;locus_tag=RM615_RS10255;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WP_037576755.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 54238 55902 . - . ID=gene-RM615_RS10260;Name=RM615_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10260;old_locus_tag=RM615_10270 NZ_JAVRJW010000009.1 Protein Homology CDS 54238 55902 . - 0 ID=cds-WP_037576758.1;Parent=gene-RM615_RS10260;Dbxref=GenBank:WP_037576758.1;Name=WP_037576758.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001794687.1;locus_tag=RM615_RS10260;product=AAA family ATPase;protein_id=WP_037576758.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 56071 56805 . + . ID=gene-RM615_RS10265;Name=RM615_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10265;old_locus_tag=RM615_10275 NZ_JAVRJW010000009.1 Protein Homology CDS 56071 56805 . + 0 ID=cds-WP_037576761.1;Parent=gene-RM615_RS10265;Dbxref=GenBank:WP_037576761.1;Name=WP_037576761.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901672.1;locus_tag=RM615_RS10265;product=NAD-dependent protein deacylase;protein_id=WP_037576761.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq gene 56772 57707 . - . ID=gene-RM615_RS10270;Name=RM615_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM615_RS10270;old_locus_tag=RM615_10280 NZ_JAVRJW010000009.1 Protein Homology CDS 56772 57707 . - 0 ID=cds-WP_371874992.1;Parent=gene-RM615_RS10270;Dbxref=GenBank:WP_371874992.1;Name=WP_371874992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719336.1;locus_tag=RM615_RS10270;product=alpha/beta hydrolase;protein_id=WP_371874992.1;transl_table=11 NZ_JAVRJW010000009.1 RefSeq pseudogene 57861 58052 . - . ID=gene-RM615_RS10275;Name=RM615_RS10275;end_range=58052,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM615_RS10275;old_locus_tag=RM615_10285;partial=true;pseudo=true NZ_JAVRJW010000009.1 Protein Homology CDS 57861 58052 . - 0 ID=cds-RM615_RS10275;Parent=gene-RM615_RS10275;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=58052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM615_RS10275;partial=true;product=phosphopentomutase;pseudo=true;transl_table=11 ###