##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM3184675v1
#!genome-build-accession NCBI_Assembly:GCF_031846755.1
#!annotation-date 09/26/2026 01:22:48
#!annotation-source NCBI RefSeq GCF_031846755.1-RS_2026_09_26
##sequence-region NZ_JAVRJR010000010.1 1 51652
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000010.1	RefSeq	region	1	51652	.	+	.	ID=NZ_JAVRJR010000010.1:1..51652;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000010.1	RefSeq	pseudogene	1	2207	.	-	.	ID=gene-RM588_RS11370;Name=RM588_RS11370;end_range=2207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11370;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJR010000010.1	Protein Homology	CDS	1	2207	.	-	0	ID=cds-RM588_RS11370;Parent=gene-RM588_RS11370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470707.1;locus_tag=RM588_RS11370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	2824	2970	.	+	.	ID=gene-RM588_RS10480;Name=RM588_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10480;old_locus_tag=RM588_10475
NZ_JAVRJR010000010.1	GeneMarkS-2+	CDS	2824	2970	.	+	0	ID=cds-WP_172458421.1;Parent=gene-RM588_RS10480;Dbxref=GenBank:WP_172458421.1;Name=WP_172458421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10480;product=hypothetical protein;protein_id=WP_172458421.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	pseudogene	3447	3578	.	-	.	ID=gene-RM588_RS10485;Name=RM588_RS10485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS10485;old_locus_tag=RM588_10480;partial=true;pseudo=true;start_range=.,3447
NZ_JAVRJR010000010.1	Protein Homology	CDS	3447	3578	.	-	0	ID=cds-RM588_RS10485;Parent=gene-RM588_RS10485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040237.6;locus_tag=RM588_RS10485;partial=true;product=KxYKxGKxW signal peptide domain-containing protein;pseudo=true;start_range=.,3447;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	4564	6156	.	+	.	ID=gene-RM588_RS10490;Name=RM588_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10490;old_locus_tag=RM588_10485
NZ_JAVRJR010000010.1	Protein Homology	CDS	4564	6156	.	+	0	ID=cds-WP_103159537.1;Parent=gene-RM588_RS10490;Dbxref=GenBank:WP_103159537.1;Name=WP_103159537.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506551.1;locus_tag=RM588_RS10490;product=L-lactate permease;protein_id=WP_103159537.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	6203	6883	.	-	.	ID=gene-RM588_RS10495;Name=RM588_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10495;old_locus_tag=RM588_10490
NZ_JAVRJR010000010.1	Protein Homology	CDS	6203	6883	.	-	0	ID=cds-WP_311548200.1;Parent=gene-RM588_RS10495;Dbxref=GenBank:WP_311548200.1;Name=WP_311548200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723561.1;locus_tag=RM588_RS10495;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_311548200.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	6876	7988	.	-	.	ID=gene-RM588_RS10500;Name=RM588_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10500;old_locus_tag=RM588_10495
NZ_JAVRJR010000010.1	Protein Homology	CDS	6876	7988	.	-	0	ID=cds-WP_311548201.1;Parent=gene-RM588_RS10500;Dbxref=GenBank:WP_311548201.1;Name=WP_311548201.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219974.1;locus_tag=RM588_RS10500;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311548201.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	7990	9339	.	-	.	ID=gene-RM588_RS10505;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=RM588_RS10505;old_locus_tag=RM588_10500
NZ_JAVRJR010000010.1	Protein Homology	CDS	7990	9339	.	-	0	ID=cds-WP_105963003.1;Parent=gene-RM588_RS10505;Dbxref=GenBank:WP_105963003.1;Name=WP_105963003.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612778.1;locus_tag=RM588_RS10505;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_105963003.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	9314	10006	.	-	.	ID=gene-RM588_RS10510;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=RM588_RS10510;old_locus_tag=RM588_10505
NZ_JAVRJR010000010.1	Protein Homology	CDS	9314	10006	.	-	0	ID=cds-WP_165806254.1;Parent=gene-RM588_RS10510;Dbxref=GenBank:WP_165806254.1;Name=WP_165806254.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729767.1;locus_tag=RM588_RS10510;product=dethiobiotin synthase;protein_id=WP_165806254.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	10258	11580	.	+	.	ID=gene-RM588_RS10515;Name=RM588_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10515;old_locus_tag=RM588_10510
NZ_JAVRJR010000010.1	Protein Homology	CDS	10258	11580	.	+	0	ID=cds-WP_105963005.1;Parent=gene-RM588_RS10515;Dbxref=GenBank:WP_105963005.1;Name=WP_105963005.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498867.1;locus_tag=RM588_RS10515;product=Nramp family divalent metal transporter;protein_id=WP_105963005.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	11768	12190	.	+	.	ID=gene-RM588_RS10520;Name=RM588_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10520;old_locus_tag=RM588_10515
NZ_JAVRJR010000010.1	Protein Homology	CDS	11768	12190	.	+	0	ID=cds-WP_037576664.1;Parent=gene-RM588_RS10520;Dbxref=GenBank:WP_037576664.1;Name=WP_037576664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729757.1;locus_tag=RM588_RS10520;product=Hsp20/alpha crystallin family protein;protein_id=WP_037576664.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	12277	12918	.	-	.	ID=gene-RM588_RS10525;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=RM588_RS10525;old_locus_tag=RM588_10520
NZ_JAVRJR010000010.1	Protein Homology	CDS	12277	12918	.	-	0	ID=cds-WP_037576666.1;Parent=gene-RM588_RS10525;Dbxref=GenBank:WP_037576666.1;Name=WP_037576666.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018780762.1;locus_tag=RM588_RS10525;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_037576666.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	13256	13354	.	+	.	ID=gene-RM588_RS11375;Name=RM588_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11375
NZ_JAVRJR010000010.1	GeneMarkS-2+	CDS	13256	13354	.	+	0	ID=cds-WP_325050623.1;Parent=gene-RM588_RS11375;Dbxref=GenBank:WP_325050623.1;Name=WP_325050623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11375;product=NAD(P)-binding protein;protein_id=WP_325050623.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	13877	15460	.	-	.	ID=gene-RM588_RS10530;Name=mbcS;gbkey=Gene;gene=mbcS;gene_biotype=protein_coding;locus_tag=RM588_RS10530;old_locus_tag=RM588_10525
NZ_JAVRJR010000010.1	Protein Homology	CDS	13877	15460	.	-	0	ID=cds-WP_103159543.1;Parent=gene-RM588_RS10530;Dbxref=GenBank:WP_103159543.1;Name=WP_103159543.1;gbkey=CDS;gene=mbcS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505544.1;locus_tag=RM588_RS10530;product=acyl-CoA synthetase MbcS;protein_id=WP_103159543.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	16337	16657	.	+	.	ID=gene-RM588_RS10535;Name=spn;gbkey=Gene;gene=spn;gene_biotype=protein_coding;locus_tag=RM588_RS10535;old_locus_tag=RM588_10530
NZ_JAVRJR010000010.1	Protein Homology	CDS	16337	16657	.	+	0	ID=cds-WP_037576673.1;Parent=gene-RM588_RS10535;Dbxref=GenBank:WP_037576673.1;Name=WP_037576673.1;gbkey=CDS;gene=spn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166845.1;locus_tag=RM588_RS10535;product=SPIN family peroxidase inhibitor;protein_id=WP_037576673.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	16893	17519	.	+	.	ID=gene-RM588_RS10540;Name=RM588_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10540;old_locus_tag=RM588_10535
NZ_JAVRJR010000010.1	Protein Homology	CDS	16893	17519	.	+	0	ID=cds-WP_037576676.1;Parent=gene-RM588_RS10540;Dbxref=GenBank:WP_037576676.1;Name=WP_037576676.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492456.1;locus_tag=RM588_RS10540;product=FMN-dependent NADH-azoreductase;protein_id=WP_037576676.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	17842	18279	.	+	.	ID=gene-RM588_RS10545;Name=RM588_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10545;old_locus_tag=RM588_10540
NZ_JAVRJR010000010.1	Protein Homology	CDS	17842	18279	.	+	0	ID=cds-WP_245173732.1;Parent=gene-RM588_RS10545;Dbxref=GenBank:WP_245173732.1;Name=WP_245173732.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507130.1;locus_tag=RM588_RS10545;product=VOC family protein;protein_id=WP_245173732.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	18364	19527	.	-	.	ID=gene-RM588_RS10550;Name=RM588_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10550;old_locus_tag=RM588_10545
NZ_JAVRJR010000010.1	Protein Homology	CDS	18364	19527	.	-	0	ID=cds-WP_105963006.1;Parent=gene-RM588_RS10550;Dbxref=GenBank:WP_105963006.1;Name=WP_105963006.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482272.1;locus_tag=RM588_RS10550;product=amidohydrolase;protein_id=WP_105963006.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	19629	20177	.	-	.	ID=gene-RM588_RS10555;Name=RM588_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10555;old_locus_tag=RM588_10550
NZ_JAVRJR010000010.1	Protein Homology	CDS	19629	20177	.	-	0	ID=cds-WP_037576688.1;Parent=gene-RM588_RS10555;Dbxref=GenBank:WP_037576688.1;Name=WP_037576688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901526.1;locus_tag=RM588_RS10555;product=DUF4064 domain-containing protein;protein_id=WP_037576688.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	20772	22157	.	+	.	ID=gene-RM588_RS10560;Name=RM588_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10560;old_locus_tag=RM588_10555
NZ_JAVRJR010000010.1	Protein Homology	CDS	20772	22157	.	+	0	ID=cds-WP_107378591.1;Parent=gene-RM588_RS10560;Dbxref=GenBank:WP_107378591.1;Name=WP_107378591.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471872.1;locus_tag=RM588_RS10560;product=amino acid permease;protein_id=WP_107378591.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	22535	23035	.	+	.	ID=gene-RM588_RS10565;Name=RM588_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10565;old_locus_tag=RM588_10560
NZ_JAVRJR010000010.1	Protein Homology	CDS	22535	23035	.	+	0	ID=cds-WP_037576695.1;Parent=gene-RM588_RS10565;Dbxref=GenBank:WP_037576695.1;Name=WP_037576695.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664111.1;locus_tag=RM588_RS10565;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_037576695.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	23196	24689	.	+	.	ID=gene-RM588_RS10570;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM588_RS10570;old_locus_tag=RM588_10565
NZ_JAVRJR010000010.1	Protein Homology	CDS	23196	24689	.	+	0	ID=cds-WP_037576697.1;Parent=gene-RM588_RS10570;Dbxref=GenBank:WP_037576697.1;Name=WP_037576697.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612817.1;locus_tag=RM588_RS10570;product=L-lactate dehydrogenase (quinone);protein_id=WP_037576697.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	24707	24817	.	+	.	ID=gene-RM588_RS10575;Name=RM588_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10575;old_locus_tag=RM588_10570
NZ_JAVRJR010000010.1	Protein Homology	CDS	24707	24817	.	+	0	ID=cds-WP_069191690.1;Parent=gene-RM588_RS10575;Dbxref=GenBank:WP_069191690.1;Name=WP_069191690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468545.1;locus_tag=RM588_RS10575;product=SE2200 family small protein;protein_id=WP_069191690.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	24894	26063	.	-	.	ID=gene-RM588_RS10580;Name=RM588_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10580;old_locus_tag=RM588_10575
NZ_JAVRJR010000010.1	Protein Homology	CDS	24894	26063	.	-	0	ID=cds-WP_037576700.1;Parent=gene-RM588_RS10580;Dbxref=GenBank:WP_037576700.1;Name=WP_037576700.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434998.1;locus_tag=RM588_RS10580;product=MFS transporter;protein_id=WP_037576700.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	26373	26831	.	+	.	ID=gene-RM588_RS10585;Name=RM588_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10585;old_locus_tag=RM588_10580
NZ_JAVRJR010000010.1	Protein Homology	CDS	26373	26831	.	+	0	ID=cds-WP_037576704.1;Parent=gene-RM588_RS10585;Dbxref=GenBank:WP_037576704.1;Name=WP_037576704.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: protein motif:HMM:NF014864.7;locus_tag=RM588_RS10585;product=arginine repressor;protein_id=WP_037576704.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	27073	28299	.	+	.	ID=gene-RM588_RS10590;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=RM588_RS10590;old_locus_tag=RM588_10585
NZ_JAVRJR010000010.1	Protein Homology	CDS	27073	28299	.	+	0	ID=cds-WP_037576707.1;Parent=gene-RM588_RS10590;Dbxref=GenBank:WP_037576707.1;Name=WP_037576707.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175479.1;locus_tag=RM588_RS10590;product=arginine deiminase;protein_id=WP_037576707.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	28323	29330	.	+	.	ID=gene-RM588_RS10595;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM588_RS10595;old_locus_tag=RM588_10590
NZ_JAVRJR010000010.1	Protein Homology	CDS	28323	29330	.	+	0	ID=cds-WP_103159155.1;Parent=gene-RM588_RS10595;Dbxref=GenBank:WP_103159155.1;Name=WP_103159155.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165722.1;locus_tag=RM588_RS10595;product=ornithine carbamoyltransferase;protein_id=WP_103159155.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	29427	30845	.	+	.	ID=gene-RM588_RS10600;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=RM588_RS10600;old_locus_tag=RM588_10595
NZ_JAVRJR010000010.1	Protein Homology	CDS	29427	30845	.	+	0	ID=cds-WP_311548202.1;Parent=gene-RM588_RS10600;Dbxref=GenBank:WP_311548202.1;Name=WP_311548202.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464536.1;locus_tag=RM588_RS10600;product=arginine-ornithine antiporter;protein_id=WP_311548202.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	30862	31803	.	+	.	ID=gene-RM588_RS10605;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=RM588_RS10605;old_locus_tag=RM588_10600
NZ_JAVRJR010000010.1	Protein Homology	CDS	30862	31803	.	+	0	ID=cds-WP_268216887.1;Parent=gene-RM588_RS10605;Dbxref=GenBank:WP_268216887.1;Name=WP_268216887.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660031.1;locus_tag=RM588_RS10605;product=carbamate kinase;protein_id=WP_268216887.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	31825	32529	.	+	.	ID=gene-RM588_RS10610;Name=RM588_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10610;old_locus_tag=RM588_10605
NZ_JAVRJR010000010.1	Protein Homology	CDS	31825	32529	.	+	0	ID=cds-WP_107366422.1;Parent=gene-RM588_RS10610;Dbxref=GenBank:WP_107366422.1;Name=WP_107366422.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM588_RS10610;product=Crp/Fnr family transcriptional regulator;protein_id=WP_107366422.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	32619	33968	.	-	.	ID=gene-RM588_RS10615;Name=RM588_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10615;old_locus_tag=RM588_10610
NZ_JAVRJR010000010.1	Protein Homology	CDS	32619	33968	.	-	0	ID=cds-WP_311548203.1;Parent=gene-RM588_RS10615;Dbxref=GenBank:WP_311548203.1;Name=WP_311548203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=RM588_RS10615;product=nucleoside recognition domain-containing protein;protein_id=WP_311548203.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	33962	35071	.	-	.	ID=gene-RM588_RS10620;Name=RM588_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10620;old_locus_tag=RM588_10615
NZ_JAVRJR010000010.1	Protein Homology	CDS	33962	35071	.	-	0	ID=cds-WP_107367011.1;Parent=gene-RM588_RS10620;Dbxref=GenBank:WP_107367011.1;Name=WP_107367011.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466314.1;locus_tag=RM588_RS10620;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_107367011.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	35220	35978	.	-	.	ID=gene-RM588_RS10625;Name=RM588_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10625;old_locus_tag=RM588_10620
NZ_JAVRJR010000010.1	Protein Homology	CDS	35220	35978	.	-	0	ID=cds-WP_103159149.1;Parent=gene-RM588_RS10625;Dbxref=GenBank:WP_103159149.1;Name=WP_103159149.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464138.1;locus_tag=RM588_RS10625;product=alpha/beta hydrolase;protein_id=WP_103159149.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	35994	36671	.	-	.	ID=gene-RM588_RS10630;Name=RM588_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10630;old_locus_tag=RM588_10625
NZ_JAVRJR010000010.1	Protein Homology	CDS	35994	36671	.	-	0	ID=cds-WP_107366426.1;Parent=gene-RM588_RS10630;Dbxref=GenBank:WP_107366426.1;Name=WP_107366426.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470117.1;locus_tag=RM588_RS10630;product=ABC transporter permease;protein_id=WP_107366426.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	36671	37612	.	-	.	ID=gene-RM588_RS10635;Name=RM588_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10635;old_locus_tag=RM588_10630
NZ_JAVRJR010000010.1	Protein Homology	CDS	36671	37612	.	-	0	ID=cds-WP_105963014.1;Parent=gene-RM588_RS10635;Dbxref=GenBank:WP_105963014.1;Name=WP_105963014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302416.1;locus_tag=RM588_RS10635;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_105963014.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	37630	38265	.	-	.	ID=gene-RM588_RS10640;Name=RM588_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10640;old_locus_tag=RM588_10635
NZ_JAVRJR010000010.1	Protein Homology	CDS	37630	38265	.	-	0	ID=cds-WP_037576728.1;Parent=gene-RM588_RS10640;Dbxref=GenBank:WP_037576728.1;Name=WP_037576728.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471024.1;locus_tag=RM588_RS10640;product=ABC transporter permease;protein_id=WP_037576728.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	38262	39458	.	-	.	ID=gene-RM588_RS10645;Name=RM588_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10645;old_locus_tag=RM588_10640
NZ_JAVRJR010000010.1	Protein Homology	CDS	38262	39458	.	-	0	ID=cds-WP_107399135.1;Parent=gene-RM588_RS10645;Dbxref=GenBank:WP_107399135.1;Name=WP_107399135.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473374.1;locus_tag=RM588_RS10645;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_107399135.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	39811	40347	.	-	.	ID=gene-RM588_RS10650;Name=RM588_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10650;old_locus_tag=RM588_10645
NZ_JAVRJR010000010.1	Protein Homology	CDS	39811	40347	.	-	0	ID=cds-WP_107366429.1;Parent=gene-RM588_RS10650;Dbxref=GenBank:WP_107366429.1;Name=WP_107366429.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898483.1;locus_tag=RM588_RS10650;product=TetR/AcrR family transcriptional regulator;protein_id=WP_107366429.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	40540	41259	.	-	.	ID=gene-RM588_RS10655;Name=RM588_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10655;old_locus_tag=RM588_10650
NZ_JAVRJR010000010.1	Protein Homology	CDS	40540	41259	.	-	0	ID=cds-WP_311548204.1;Parent=gene-RM588_RS10655;Dbxref=GenBank:WP_311548204.1;Name=WP_311548204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022811.7;locus_tag=RM588_RS10655;product=DUF3169 family protein;protein_id=WP_311548204.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	41256	41459	.	-	.	ID=gene-RM588_RS10660;Name=RM588_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10660;old_locus_tag=RM588_10655
NZ_JAVRJR010000010.1	Protein Homology	CDS	41256	41459	.	-	0	ID=cds-WP_037576741.1;Parent=gene-RM588_RS10660;Dbxref=GenBank:WP_037576741.1;Name=WP_037576741.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=RM588_RS10660;product=helix-turn-helix transcriptional regulator;protein_id=WP_037576741.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	41585	42778	.	-	.	ID=gene-RM588_RS10665;Name=RM588_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10665;old_locus_tag=RM588_10660
NZ_JAVRJR010000010.1	Protein Homology	CDS	41585	42778	.	-	0	ID=cds-WP_311548205.1;Parent=gene-RM588_RS10665;Dbxref=GenBank:WP_311548205.1;Name=WP_311548205.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006637724.1;locus_tag=RM588_RS10665;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311548205.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	42948	43556	.	+	.	ID=gene-RM588_RS10670;Name=RM588_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10670;old_locus_tag=RM588_10665
NZ_JAVRJR010000010.1	Protein Homology	CDS	42948	43556	.	+	0	ID=cds-WP_037576746.1;Parent=gene-RM588_RS10670;Dbxref=GenBank:WP_037576746.1;Name=WP_037576746.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506433.1;locus_tag=RM588_RS10670;product=class I SAM-dependent methyltransferase;protein_id=WP_037576746.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	43715	45097	.	-	.	ID=gene-RM588_RS10675;Name=RM588_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10675;old_locus_tag=RM588_10670
NZ_JAVRJR010000010.1	Protein Homology	CDS	43715	45097	.	-	0	ID=cds-WP_311548206.1;Parent=gene-RM588_RS10675;Dbxref=GenBank:WP_311548206.1;Name=WP_311548206.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479375.1;locus_tag=RM588_RS10675;product=cryptochrome/photolyase family protein;protein_id=WP_311548206.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	45307	45807	.	-	.	ID=gene-RM588_RS10680;Name=RM588_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10680;old_locus_tag=RM588_10675
NZ_JAVRJR010000010.1	Protein Homology	CDS	45307	45807	.	-	0	ID=cds-WP_051605017.1;Parent=gene-RM588_RS10680;Dbxref=GenBank:WP_051605017.1;Name=WP_051605017.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM588_RS10680;product=DUF805 domain-containing protein;protein_id=WP_051605017.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	45993	46490	.	-	.	ID=gene-RM588_RS10685;Name=RM588_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10685;old_locus_tag=RM588_10680
NZ_JAVRJR010000010.1	Protein Homology	CDS	45993	46490	.	-	0	ID=cds-WP_037576752.1;Parent=gene-RM588_RS10685;Dbxref=GenBank:WP_037576752.1;Name=WP_037576752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=RM588_RS10685;product=DUF805 domain-containing protein;protein_id=WP_037576752.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	46560	47597	.	-	.	ID=gene-RM588_RS10690;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=RM588_RS10690;old_locus_tag=RM588_10685
NZ_JAVRJR010000010.1	Protein Homology	CDS	46560	47597	.	-	0	ID=cds-WP_107378400.1;Parent=gene-RM588_RS10690;Dbxref=GenBank:WP_107378400.1;Name=WP_107378400.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449326.1;locus_tag=RM588_RS10690;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WP_107378400.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	47590	49254	.	-	.	ID=gene-RM588_RS10695;Name=RM588_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10695;old_locus_tag=RM588_10690
NZ_JAVRJR010000010.1	Protein Homology	CDS	47590	49254	.	-	0	ID=cds-WP_446289383.1;Parent=gene-RM588_RS10695;Dbxref=GenBank:WP_446289383.1;Name=WP_446289383.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001794687.1;locus_tag=RM588_RS10695;product=AAA family ATPase;protein_id=WP_446289383.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	49423	50157	.	+	.	ID=gene-RM588_RS10700;Name=RM588_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10700;old_locus_tag=RM588_10695
NZ_JAVRJR010000010.1	Protein Homology	CDS	49423	50157	.	+	0	ID=cds-WP_103159140.1;Parent=gene-RM588_RS10700;Dbxref=GenBank:WP_103159140.1;Name=WP_103159140.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901672.1;locus_tag=RM588_RS10700;product=NAD-dependent protein deacylase;protein_id=WP_103159140.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	gene	50169	51059	.	-	.	ID=gene-RM588_RS10705;Name=RM588_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10705;old_locus_tag=RM588_10700
NZ_JAVRJR010000010.1	Protein Homology	CDS	50169	51059	.	-	0	ID=cds-WP_311548208.1;Parent=gene-RM588_RS10705;Dbxref=GenBank:WP_311548208.1;Name=WP_311548208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719336.1;locus_tag=RM588_RS10705;product=alpha/beta hydrolase;protein_id=WP_311548208.1;transl_table=11
NZ_JAVRJR010000010.1	RefSeq	pseudogene	51215	51652	.	-	.	ID=gene-RM588_RS10710;Name=RM588_RS10710;end_range=51652,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS10710;old_locus_tag=RM588_10705;partial=true;pseudo=true
NZ_JAVRJR010000010.1	Protein Homology	CDS	51215	51652	.	-	0	ID=cds-RM588_RS10710;Parent=gene-RM588_RS10710;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=51652,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM588_RS10710;partial=true;product=phosphopentomutase;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJR010000011.1 1 47979
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000011.1	RefSeq	region	1	47979	.	+	.	ID=NZ_JAVRJR010000011.1:1..47979;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000011.1	RefSeq	pseudogene	1	338	.	+	.	ID=gene-RM588_RS10715;Name=RM588_RS10715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS10715;old_locus_tag=RM588_10710;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJR010000011.1	Protein Homology	CDS	1	338	.	+	2	ID=cds-RM588_RS10715;Parent=gene-RM588_RS10715;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729405.1;locus_tag=RM588_RS10715;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	422	1237	.	+	.	ID=gene-RM588_RS10720;Name=RM588_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10720;old_locus_tag=RM588_10715
NZ_JAVRJR010000011.1	Protein Homology	CDS	422	1237	.	+	0	ID=cds-WP_084276053.1;Parent=gene-RM588_RS10720;Dbxref=GenBank:WP_084276053.1;Name=WP_084276053.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613424.1;locus_tag=RM588_RS10720;product=SPL family radical SAM protein;protein_id=WP_084276053.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	1252	1776	.	+	.	ID=gene-RM588_RS10725;Name=RM588_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10725;old_locus_tag=RM588_10720
NZ_JAVRJR010000011.1	Protein Homology	CDS	1252	1776	.	+	0	ID=cds-WP_103158752.1;Parent=gene-RM588_RS10725;Dbxref=GenBank:WP_103158752.1;Name=WP_103158752.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425564.1;locus_tag=RM588_RS10725;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_103158752.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	1906	2349	.	-	.	ID=gene-RM588_RS10730;Name=RM588_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10730;old_locus_tag=RM588_10725
NZ_JAVRJR010000011.1	Protein Homology	CDS	1906	2349	.	-	0	ID=cds-WP_306823253.1;Parent=gene-RM588_RS10730;Dbxref=GenBank:WP_306823253.1;Name=WP_306823253.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468210.1;locus_tag=RM588_RS10730;product=ASCH domain-containing protein;protein_id=WP_306823253.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	2784	3290	.	+	.	ID=gene-RM588_RS10735;Name=RM588_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10735;old_locus_tag=RM588_10730
NZ_JAVRJR010000011.1	Protein Homology	CDS	2784	3290	.	+	0	ID=cds-WP_037575683.1;Parent=gene-RM588_RS10735;Dbxref=GenBank:WP_037575683.1;Name=WP_037575683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459684.1;locus_tag=RM588_RS10735;product=YagU family protein;protein_id=WP_037575683.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	3772	4005	.	-	.	ID=gene-RM588_RS10740;Name=RM588_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10740;old_locus_tag=RM588_10735
NZ_JAVRJR010000011.1	GeneMarkS-2+	CDS	3772	4005	.	-	0	ID=cds-WP_311548209.1;Parent=gene-RM588_RS10740;Dbxref=GenBank:WP_311548209.1;Name=WP_311548209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10740;product=hypothetical protein;protein_id=WP_311548209.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	4092	4400	.	-	.	ID=gene-RM588_RS10745;Name=RM588_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10745;old_locus_tag=RM588_10740
NZ_JAVRJR010000011.1	Protein Homology	CDS	4092	4400	.	-	0	ID=cds-WP_311548210.1;Parent=gene-RM588_RS10745;Dbxref=GenBank:WP_311548210.1;Name=WP_311548210.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911411.1;locus_tag=RM588_RS10745;product=phage head closure protein;protein_id=WP_311548210.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	4461	6104	.	-	.	ID=gene-RM588_RS10750;Name=RM588_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10750;old_locus_tag=RM588_10745
NZ_JAVRJR010000011.1	Protein Homology	CDS	4461	6104	.	-	0	ID=cds-WP_311548211.1;Parent=gene-RM588_RS10750;Dbxref=GenBank:WP_311548211.1;Name=WP_311548211.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003159542.1;locus_tag=RM588_RS10750;product=terminase large subunit;protein_id=WP_311548211.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	6097	6417	.	-	.	ID=gene-RM588_RS10755;Name=RM588_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10755;old_locus_tag=RM588_10750
NZ_JAVRJR010000011.1	Protein Homology	CDS	6097	6417	.	-	0	ID=cds-WP_311548212.1;Parent=gene-RM588_RS10755;Dbxref=GenBank:WP_311548212.1;Name=WP_311548212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728780.1;locus_tag=RM588_RS10755;product=hypothetical protein;protein_id=WP_311548212.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	6555	6845	.	-	.	ID=gene-RM588_RS10760;Name=RM588_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10760;old_locus_tag=RM588_10755
NZ_JAVRJR010000011.1	Protein Homology	CDS	6555	6845	.	-	0	ID=cds-WP_311548213.1;Parent=gene-RM588_RS10760;Dbxref=GenBank:WP_311548213.1;Name=WP_311548213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385220.1;locus_tag=RM588_RS10760;product=HNH endonuclease;protein_id=WP_311548213.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	6838	7119	.	-	.	ID=gene-RM588_RS10765;Name=RM588_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10765;old_locus_tag=RM588_10760
NZ_JAVRJR010000011.1	Protein Homology	CDS	6838	7119	.	-	0	ID=cds-WP_165621000.1;Parent=gene-RM588_RS10765;Dbxref=GenBank:WP_165621000.1;Name=WP_165621000.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911415.1;locus_tag=RM588_RS10765;product=head-tail connector protein;protein_id=WP_165621000.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	7182	8405	.	-	.	ID=gene-RM588_RS10770;Name=RM588_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10770;old_locus_tag=RM588_10765
NZ_JAVRJR010000011.1	Protein Homology	CDS	7182	8405	.	-	0	ID=cds-WP_311548214.1;Parent=gene-RM588_RS10770;Dbxref=GenBank:WP_311548214.1;Name=WP_311548214.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673442.1;locus_tag=RM588_RS10770;product=phage major capsid protein;protein_id=WP_311548214.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	8407	8973	.	-	.	ID=gene-RM588_RS10775;Name=RM588_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10775;old_locus_tag=RM588_10770
NZ_JAVRJR010000011.1	Protein Homology	CDS	8407	8973	.	-	0	ID=cds-WP_311548215.1;Parent=gene-RM588_RS10775;Dbxref=GenBank:WP_311548215.1;Name=WP_311548215.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911417.1;locus_tag=RM588_RS10775;product=HK97 family phage prohead protease;protein_id=WP_311548215.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	8960	10159	.	-	.	ID=gene-RM588_RS10780;Name=RM588_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10780;old_locus_tag=RM588_10775
NZ_JAVRJR010000011.1	Protein Homology	CDS	8960	10159	.	-	0	ID=cds-WP_375713821.1;Parent=gene-RM588_RS10780;Dbxref=GenBank:WP_375713821.1;Name=WP_375713821.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911418.1;locus_tag=RM588_RS10780;product=phage portal protein;protein_id=WP_375713821.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	10276	10617	.	-	.	ID=gene-RM588_RS10785;Name=RM588_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10785;old_locus_tag=RM588_10780
NZ_JAVRJR010000011.1	Protein Homology	CDS	10276	10617	.	-	0	ID=cds-WP_311548217.1;Parent=gene-RM588_RS10785;Dbxref=GenBank:WP_311548217.1;Name=WP_311548217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728774.1;locus_tag=RM588_RS10785;product=pathogenicity island protein;protein_id=WP_311548217.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	10888	12345	.	-	.	ID=gene-RM588_RS10790;Name=RM588_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10790;old_locus_tag=RM588_10785
NZ_JAVRJR010000011.1	Protein Homology	CDS	10888	12345	.	-	0	ID=cds-WP_311548218.1;Parent=gene-RM588_RS10790;Dbxref=GenBank:WP_311548218.1;Name=WP_311548218.1;Ontology_term=GO:0004386,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476197.1;locus_tag=RM588_RS10790;product=virulence-associated E family protein;protein_id=WP_311548218.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	12361	13248	.	-	.	ID=gene-RM588_RS10795;Name=RM588_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10795;old_locus_tag=RM588_10790
NZ_JAVRJR010000011.1	Protein Homology	CDS	12361	13248	.	-	0	ID=cds-WP_311548219.1;Parent=gene-RM588_RS10795;Dbxref=GenBank:WP_311548219.1;Name=WP_311548219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF057215.1;locus_tag=RM588_RS10795;product=primase alpha helix C-terminal domain-containing protein;protein_id=WP_311548219.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	13300	13605	.	-	.	ID=gene-RM588_RS10800;Name=tscT;gbkey=Gene;gene=tscT;gene_biotype=protein_coding;locus_tag=RM588_RS10800;old_locus_tag=RM588_10795
NZ_JAVRJR010000011.1	Protein Homology	CDS	13300	13605	.	-	0	ID=cds-WP_311548220.1;Parent=gene-RM588_RS10800;Dbxref=GenBank:WP_311548220.1;Name=WP_311548220.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;gene=tscT;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: protein motif:HMM:NF018990.8;locus_tag=RM588_RS10800;product=type II toxin-antitoxin system toxin TscT;protein_id=WP_311548220.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	13605	14027	.	-	.	ID=gene-RM588_RS10805;Name=RM588_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10805;old_locus_tag=RM588_10800
NZ_JAVRJR010000011.1	Protein Homology	CDS	13605	14027	.	-	0	ID=cds-WP_311548221.1;Parent=gene-RM588_RS10805;Dbxref=GenBank:WP_311548221.1;Name=WP_311548221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469472.1;locus_tag=RM588_RS10805;product=hypothetical protein;protein_id=WP_311548221.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	14029	14232	.	-	.	ID=gene-RM588_RS10810;Name=RM588_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10810;old_locus_tag=RM588_10805
NZ_JAVRJR010000011.1	Protein Homology	CDS	14029	14232	.	-	0	ID=cds-WP_311548222.1;Parent=gene-RM588_RS10810;Dbxref=GenBank:WP_311548222.1;Name=WP_311548222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231389.1;locus_tag=RM588_RS10810;product=pathogenicity island protein;protein_id=WP_311548222.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	14229	14534	.	-	.	ID=gene-RM588_RS10815;Name=RM588_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10815;old_locus_tag=RM588_10810
NZ_JAVRJR010000011.1	Protein Homology	CDS	14229	14534	.	-	0	ID=cds-WP_311541156.1;Parent=gene-RM588_RS10815;Dbxref=GenBank:WP_311541156.1;Name=WP_311541156.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511382.1;locus_tag=RM588_RS10815;product=helix-turn-helix domain-containing protein;protein_id=WP_311541156.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	14538	14753	.	-	.	ID=gene-RM588_RS10820;Name=RM588_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10820;old_locus_tag=RM588_10815
NZ_JAVRJR010000011.1	Protein Homology	CDS	14538	14753	.	-	0	ID=cds-WP_311541157.1;Parent=gene-RM588_RS10820;Dbxref=GenBank:WP_311541157.1;Name=WP_311541157.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794315.1;locus_tag=RM588_RS10820;product=helix-turn-helix domain-containing protein;protein_id=WP_311541157.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	14925	15560	.	+	.	ID=gene-RM588_RS10825;Name=RM588_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10825;old_locus_tag=RM588_10820
NZ_JAVRJR010000011.1	Protein Homology	CDS	14925	15560	.	+	0	ID=cds-WP_311541159.1;Parent=gene-RM588_RS10825;Dbxref=GenBank:WP_311541159.1;Name=WP_311541159.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616253.1;locus_tag=RM588_RS10825;product=helix-turn-helix domain-containing protein;protein_id=WP_311541159.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	15570	16739	.	+	.	ID=gene-RM588_RS10830;Name=RM588_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10830;old_locus_tag=RM588_10825
NZ_JAVRJR010000011.1	Protein Homology	CDS	15570	16739	.	+	0	ID=cds-WP_311541160.1;Parent=gene-RM588_RS10830;Dbxref=GenBank:WP_311541160.1;Name=WP_311541160.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179352.1;locus_tag=RM588_RS10830;product=site-specific integrase;protein_id=WP_311541160.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	16808	18427	.	-	.	ID=gene-RM588_RS10835;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=RM588_RS10835;old_locus_tag=RM588_10830
NZ_JAVRJR010000011.1	Protein Homology	CDS	16808	18427	.	-	0	ID=cds-WP_107371989.1;Parent=gene-RM588_RS10835;Dbxref=GenBank:WP_107371989.1;Name=WP_107371989.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=RM588_RS10835;product=chaperonin GroEL;protein_id=WP_107371989.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	18497	18784	.	-	.	ID=gene-RM588_RS10840;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=RM588_RS10840;old_locus_tag=RM588_10835
NZ_JAVRJR010000011.1	Protein Homology	CDS	18497	18784	.	-	0	ID=cds-WP_107371988.1;Parent=gene-RM588_RS10840;Dbxref=GenBank:WP_107371988.1;Name=WP_107371988.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275309.1;locus_tag=RM588_RS10840;product=co-chaperone GroES;protein_id=WP_107371988.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	18954	19706	.	+	.	ID=gene-RM588_RS10845;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=RM588_RS10845;old_locus_tag=RM588_10840
NZ_JAVRJR010000011.1	Protein Homology	CDS	18954	19706	.	+	0	ID=cds-WP_107364119.1;Parent=gene-RM588_RS10845;Dbxref=GenBank:WP_107364119.1;Name=WP_107364119.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425570.1;locus_tag=RM588_RS10845;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_107364119.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	19784	21004	.	-	.	ID=gene-RM588_RS10850;Name=RM588_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10850;old_locus_tag=RM588_10845
NZ_JAVRJR010000011.1	Protein Homology	CDS	19784	21004	.	-	0	ID=cds-WP_198644779.1;Parent=gene-RM588_RS10850;Dbxref=GenBank:WP_198644779.1;Name=WP_198644779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039170.1;locus_tag=RM588_RS10850;product=SdrH family protein;protein_id=WP_198644779.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	21184	21981	.	+	.	ID=gene-RM588_RS10855;Name=RM588_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10855;old_locus_tag=RM588_10850
NZ_JAVRJR010000011.1	Protein Homology	CDS	21184	21981	.	+	0	ID=cds-WP_311541446.1;Parent=gene-RM588_RS10855;Dbxref=GenBank:WP_311541446.1;Name=WP_311541446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166407.1;locus_tag=RM588_RS10855;product=carbon-nitrogen family hydrolase;protein_id=WP_311541446.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	22629	23192	.	+	.	ID=gene-RM588_RS10860;Name=RM588_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10860;old_locus_tag=RM588_10855
NZ_JAVRJR010000011.1	Protein Homology	CDS	22629	23192	.	+	0	ID=cds-WP_037575678.1;Parent=gene-RM588_RS10860;Dbxref=GenBank:WP_037575678.1;Name=WP_037575678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638096.1;locus_tag=RM588_RS10860;product=accessory gene regulator AgrB;protein_id=WP_037575678.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	23195	23329	.	+	.	ID=gene-RM588_RS10865;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=RM588_RS10865;old_locus_tag=RM588_10860
NZ_JAVRJR010000011.1	Protein Homology	CDS	23195	23329	.	+	0	ID=cds-WP_069191685.1;Parent=gene-RM588_RS10865;Dbxref=GenBank:WP_069191685.1;Name=WP_069191685.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613413.1;locus_tag=RM588_RS10865;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_069191685.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	23361	24659	.	+	.	ID=gene-RM588_RS10870;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=RM588_RS10870;old_locus_tag=RM588_10865
NZ_JAVRJR010000011.1	Protein Homology	CDS	23361	24659	.	+	0	ID=cds-WP_375712561.1;Parent=gene-RM588_RS10870;Dbxref=GenBank:WP_375712561.1;Name=WP_375712561.1;gbkey=CDS;gene=agrC;inference=COORDINATES: protein motif:HMM:NF046015.1;locus_tag=RM588_RS10870;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_375712561.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	24674	25396	.	+	.	ID=gene-RM588_RS10875;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=RM588_RS10875;old_locus_tag=RM588_10870
NZ_JAVRJR010000011.1	Protein Homology	CDS	24674	25396	.	+	0	ID=cds-WP_037575675.1;Parent=gene-RM588_RS10875;Dbxref=GenBank:WP_037575675.1;Name=WP_037575675.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=RM588_RS10875;product=quorum-sensing response regulator AgrA;protein_id=WP_037575675.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	25893	27377	.	-	.	ID=gene-RM588_RS10880;Name=RM588_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10880;old_locus_tag=RM588_10875
NZ_JAVRJR010000011.1	Protein Homology	CDS	25893	27377	.	-	0	ID=cds-WP_037575672.1;Parent=gene-RM588_RS10880;Dbxref=GenBank:WP_037575672.1;Name=WP_037575672.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613916.1;locus_tag=RM588_RS10880;product=sucrose-6-phosphate hydrolase;protein_id=WP_037575672.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	27718	27942	.	-	.	ID=gene-RM588_RS10885;Name=RM588_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10885;old_locus_tag=RM588_10880
NZ_JAVRJR010000011.1	Protein Homology	CDS	27718	27942	.	-	0	ID=cds-WP_037575670.1;Parent=gene-RM588_RS10885;Dbxref=GenBank:WP_037575670.1;Name=WP_037575670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=RM588_RS10885;product=sulfurtransferase TusA family protein;protein_id=WP_037575670.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	27964	29046	.	-	.	ID=gene-RM588_RS10890;Name=RM588_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10890;old_locus_tag=RM588_10885
NZ_JAVRJR010000011.1	Protein Homology	CDS	27964	29046	.	-	0	ID=cds-WP_037575667.1;Parent=gene-RM588_RS10890;Dbxref=GenBank:WP_037575667.1;Name=WP_037575667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461425.1;locus_tag=RM588_RS10890;product=YeeE/YedE family protein;protein_id=WP_037575667.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	29219	29866	.	-	.	ID=gene-RM588_RS10895;Name=RM588_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10895;old_locus_tag=RM588_10890
NZ_JAVRJR010000011.1	Protein Homology	CDS	29219	29866	.	-	0	ID=cds-WP_037575663.1;Parent=gene-RM588_RS10895;Dbxref=GenBank:WP_037575663.1;Name=WP_037575663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166397.1;locus_tag=RM588_RS10895;product=redox-sensing transcriptional repressor Rex;protein_id=WP_037575663.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	30152	32092	.	+	.	ID=gene-RM588_RS10900;Name=RM588_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10900;old_locus_tag=RM588_10895
NZ_JAVRJR010000011.1	Protein Homology	CDS	30152	32092	.	+	0	ID=cds-WP_233655126.1;Parent=gene-RM588_RS10900;Dbxref=GenBank:WP_233655126.1;Name=WP_233655126.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425581.1;locus_tag=RM588_RS10900;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_233655126.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	32428	34050	.	+	.	ID=gene-RM588_RS10905;Name=RM588_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10905;old_locus_tag=RM588_10900
NZ_JAVRJR010000011.1	Protein Homology	CDS	32428	34050	.	+	0	ID=cds-WP_233655125.1;Parent=gene-RM588_RS10905;Dbxref=GenBank:WP_233655125.1;Name=WP_233655125.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167548.1;locus_tag=RM588_RS10905;product=MutS-related protein;protein_id=WP_233655125.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	34072	35091	.	-	.	ID=gene-RM588_RS10910;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=RM588_RS10910;old_locus_tag=RM588_10905
NZ_JAVRJR010000011.1	Protein Homology	CDS	34072	35091	.	-	0	ID=cds-WP_037575654.1;Parent=gene-RM588_RS10910;Dbxref=GenBank:WP_037575654.1;Name=WP_037575654.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613399.1;locus_tag=RM588_RS10910;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_037575654.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	35088	35510	.	-	.	ID=gene-RM588_RS10915;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=RM588_RS10915;old_locus_tag=RM588_10910
NZ_JAVRJR010000011.1	Protein Homology	CDS	35088	35510	.	-	0	ID=cds-WP_371874997.1;Parent=gene-RM588_RS10915;Dbxref=GenBank:WP_371874997.1;Name=WP_371874997.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466250.1;locus_tag=RM588_RS10915;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_371874997.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	35522	36187	.	-	.	ID=gene-RM588_RS10920;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=RM588_RS10920;old_locus_tag=RM588_10915
NZ_JAVRJR010000011.1	Protein Homology	CDS	35522	36187	.	-	0	ID=cds-WP_037575648.1;Parent=gene-RM588_RS10920;Dbxref=GenBank:WP_037575648.1;Name=WP_037575648.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050718.1;locus_tag=RM588_RS10920;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_037575648.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	36180	36629	.	-	.	ID=gene-RM588_RS10925;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=RM588_RS10925;old_locus_tag=RM588_10920
NZ_JAVRJR010000011.1	Protein Homology	CDS	36180	36629	.	-	0	ID=cds-WP_037575645.1;Parent=gene-RM588_RS10925;Dbxref=GenBank:WP_037575645.1;Name=WP_037575645.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590797.1;locus_tag=RM588_RS10925;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_037575645.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	37050	38738	.	+	.	ID=gene-RM588_RS10930;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=RM588_RS10930;old_locus_tag=RM588_10925
NZ_JAVRJR010000011.1	Protein Homology	CDS	37050	38738	.	+	0	ID=cds-WP_037575643.1;Parent=gene-RM588_RS10930;Dbxref=GenBank:WP_037575643.1;Name=WP_037575643.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=RM588_RS10930;product=dihydroxy-acid dehydratase;protein_id=WP_037575643.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	38756	40510	.	+	.	ID=gene-RM588_RS10935;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=RM588_RS10935;old_locus_tag=RM588_10930
NZ_JAVRJR010000011.1	Protein Homology	CDS	38756	40510	.	+	0	ID=cds-WP_103159714.1;Parent=gene-RM588_RS10935;Dbxref=GenBank:WP_103159714.1;Name=WP_103159714.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445303.1;locus_tag=RM588_RS10935;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_103159714.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	40507	40980	.	+	.	ID=gene-RM588_RS10940;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=RM588_RS10940;old_locus_tag=RM588_10935
NZ_JAVRJR010000011.1	Protein Homology	CDS	40507	40980	.	+	0	ID=cds-WP_311541444.1;Parent=gene-RM588_RS10940;Dbxref=GenBank:WP_311541444.1;Name=WP_311541444.1;Ontology_term=GO:0009082,GO:1990610,GO:0005948;gbkey=CDS;gene=ilvN;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166388.1;locus_tag=RM588_RS10940;product=acetolactate synthase small subunit;protein_id=WP_311541444.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	40999	42018	.	+	.	ID=gene-RM588_RS10945;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=RM588_RS10945;old_locus_tag=RM588_10940
NZ_JAVRJR010000011.1	Protein Homology	CDS	40999	42018	.	+	0	ID=cds-WP_084276051.1;Parent=gene-RM588_RS10945;Dbxref=GenBank:WP_084276051.1;Name=WP_084276051.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825891.1;locus_tag=RM588_RS10945;product=ketol-acid reductoisomerase;protein_id=WP_084276051.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	42051	43586	.	+	.	ID=gene-RM588_RS10950;Name=RM588_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10950;old_locus_tag=RM588_10945
NZ_JAVRJR010000011.1	Protein Homology	CDS	42051	43586	.	+	0	ID=cds-WP_105963418.1;Parent=gene-RM588_RS10950;Dbxref=GenBank:WP_105963418.1;Name=WP_105963418.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275284.1;locus_tag=RM588_RS10950;product=2-isopropylmalate synthase;protein_id=WP_105963418.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	43583	44632	.	+	.	ID=gene-RM588_RS10955;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=RM588_RS10955;old_locus_tag=RM588_10950
NZ_JAVRJR010000011.1	Protein Homology	CDS	43583	44632	.	+	0	ID=cds-WP_105963417.1;Parent=gene-RM588_RS10955;Dbxref=GenBank:WP_105963417.1;Name=WP_105963417.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219955.1;locus_tag=RM588_RS10955;product=3-isopropylmalate dehydrogenase;protein_id=WP_105963417.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	44636	46006	.	+	.	ID=gene-RM588_RS10960;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=RM588_RS10960;old_locus_tag=RM588_10955
NZ_JAVRJR010000011.1	Protein Homology	CDS	44636	46006	.	+	0	ID=cds-WP_233655122.1;Parent=gene-RM588_RS10960;Dbxref=GenBank:WP_233655122.1;Name=WP_233655122.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384293.1;locus_tag=RM588_RS10960;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_233655122.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	46008	46580	.	+	.	ID=gene-RM588_RS10965;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=RM588_RS10965;old_locus_tag=RM588_10960
NZ_JAVRJR010000011.1	Protein Homology	CDS	46008	46580	.	+	0	ID=cds-WP_105965765.1;Parent=gene-RM588_RS10965;Dbxref=GenBank:WP_105965765.1;Name=WP_105965765.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384295.1;locus_tag=RM588_RS10965;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_105965765.1;transl_table=11
NZ_JAVRJR010000011.1	RefSeq	gene	46594	47862	.	+	.	ID=gene-RM588_RS10970;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=RM588_RS10970;old_locus_tag=RM588_10965
NZ_JAVRJR010000011.1	Protein Homology	CDS	46594	47862	.	+	0	ID=cds-WP_233655120.1;Parent=gene-RM588_RS10970;Dbxref=GenBank:WP_233655120.1;Name=WP_233655120.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466255.1;locus_tag=RM588_RS10970;product=threonine ammonia-lyase IlvA;protein_id=WP_233655120.1;transl_table=11
##sequence-region NZ_JAVRJR010000012.1 1 24929
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000012.1	RefSeq	region	1	24929	.	+	.	ID=NZ_JAVRJR010000012.1:1..24929;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000012.1	RefSeq	pseudogene	473	610	.	-	.	ID=gene-RM588_RS11380;Name=RM588_RS11380;end_range=610,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11380;partial=true;pseudo=true
NZ_JAVRJR010000012.1	Protein Homology	CDS	473	610	.	-	0	ID=cds-RM588_RS11380;Parent=gene-RM588_RS11380;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916431.1;locus_tag=RM588_RS11380;partial=true;product=protein rep;pseudo=true;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	3325	3420	.	+	.	ID=gene-RM588_RS10975;Name=RM588_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10975;old_locus_tag=RM588_10970
NZ_JAVRJR010000012.1	Protein Homology	CDS	3325	3420	.	+	0	ID=cds-WP_107368147.1;Parent=gene-RM588_RS10975;Dbxref=GenBank:WP_107368147.1;Name=WP_107368147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=RM588_RS10975;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107368147.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	3890	4336	.	-	.	ID=gene-RM588_RS10980;Name=RM588_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10980;old_locus_tag=RM588_10975
NZ_JAVRJR010000012.1	Protein Homology	CDS	3890	4336	.	-	0	ID=cds-WP_311541180.1;Parent=gene-RM588_RS10980;Dbxref=GenBank:WP_311541180.1;Name=WP_311541180.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024835.7;locus_tag=RM588_RS10980;product=helix-turn-helix domain-containing protein;protein_id=WP_311541180.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	4539	4964	.	+	.	ID=gene-RM588_RS11430;Name=RM588_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11430
NZ_JAVRJR010000012.1	Protein Homology	CDS	4539	4964	.	+	0	ID=cds-WP_511567708.1;Parent=gene-RM588_RS11430;Dbxref=GenBank:WP_511567708.1;Name=WP_511567708.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.7;locus_tag=RM588_RS11430;product=helix-turn-helix domain-containing protein;protein_id=WP_511567708.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	7538	7639	.	+	.	ID=gene-RM588_RS10990;Name=RM588_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10990;old_locus_tag=RM588_10985
NZ_JAVRJR010000012.1	Protein Homology	CDS	7538	7639	.	+	0	ID=cds-WP_284570697.1;Parent=gene-RM588_RS10990;Dbxref=GenBank:WP_284570697.1;Name=WP_284570697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM588_RS10990;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_284570697.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	pseudogene	7818	8173	.	+	.	ID=gene-RM588_RS10995;Name=RM588_RS10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS10995;old_locus_tag=RM588_10990;partial=true;pseudo=true;start_range=.,7818
NZ_JAVRJR010000012.1	Protein Homology	CDS	7818	8173	.	+	0	ID=cds-RM588_RS10995;Parent=gene-RM588_RS10995;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109600.1;locus_tag=RM588_RS10995;partial=true;product=protein rep;pseudo=true;start_range=.,7818;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	8205	8366	.	+	.	ID=gene-RM588_RS11000;Name=RM588_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11000;old_locus_tag=RM588_10995
NZ_JAVRJR010000012.1	Protein Homology	CDS	8205	8366	.	+	0	ID=cds-WP_180706952.1;Parent=gene-RM588_RS11000;Dbxref=GenBank:WP_180706952.1;Name=WP_180706952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167674.1;locus_tag=RM588_RS11000;product=hypothetical protein;protein_id=WP_180706952.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	8949	9314	.	+	.	ID=gene-RM588_RS11390;Name=RM588_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11390
NZ_JAVRJR010000012.1	Protein Homology	CDS	8949	9314	.	+	0	ID=cds-WP_375712562.1;Parent=gene-RM588_RS11390;Dbxref=GenBank:WP_375712562.1;Name=WP_375712562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025445.7;locus_tag=RM588_RS11390;product=DUF4260 family protein;protein_id=WP_375712562.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	pseudogene	9434	9670	.	+	.	ID=gene-RM588_RS11420;Name=RM588_RS11420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11420;partial=true;pseudo=true;start_range=.,9434
NZ_JAVRJR010000012.1	Protein Homology	CDS	9434	9670	.	+	0	ID=cds-RM588_RS11420;Parent=gene-RM588_RS11420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729285.1;locus_tag=RM588_RS11420;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,9434;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	9743	10042	.	-	.	ID=gene-RM588_RS11005;Name=RM588_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11005;old_locus_tag=RM588_11000
NZ_JAVRJR010000012.1	GeneMarkS-2+	CDS	9743	10042	.	-	0	ID=cds-WP_311541178.1;Parent=gene-RM588_RS11005;Dbxref=GenBank:WP_311541178.1;Name=WP_311541178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11005;product=hypothetical protein;protein_id=WP_311541178.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	pseudogene	10134	10601	.	-	.	ID=gene-RM588_RS11010;Name=RM588_RS11010;end_range=10601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11010;old_locus_tag=RM588_11005;partial=true;pseudo=true
NZ_JAVRJR010000012.1	Protein Homology	CDS	10134	10601	.	-	0	ID=cds-RM588_RS11010;Parent=gene-RM588_RS11010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=10601,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635265.1;locus_tag=RM588_RS11010;partial=true;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	10999	11583	.	+	.	ID=gene-RM588_RS11015;Name=RM588_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11015;old_locus_tag=RM588_11010
NZ_JAVRJR010000012.1	Protein Homology	CDS	10999	11583	.	+	0	ID=cds-WP_311541177.1;Parent=gene-RM588_RS11015;Dbxref=GenBank:WP_311541177.1;Name=WP_311541177.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504693.1;locus_tag=RM588_RS11015;product=recombinase family protein;protein_id=WP_311541177.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	11619	12293	.	+	.	ID=gene-RM588_RS11020;Name=RM588_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11020;old_locus_tag=RM588_11015
NZ_JAVRJR010000012.1	Protein Homology	CDS	11619	12293	.	+	0	ID=cds-WP_311541176.1;Parent=gene-RM588_RS11020;Dbxref=GenBank:WP_311541176.1;Name=WP_311541176.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM588_RS11020;product=IS6 family transposase;protein_id=WP_311541176.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	12359	13237	.	-	.	ID=gene-RM588_RS11025;Name=RM588_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11025;old_locus_tag=RM588_11020
NZ_JAVRJR010000012.1	Protein Homology	CDS	12359	13237	.	-	0	ID=cds-WP_311541175.1;Parent=gene-RM588_RS11025;Dbxref=GenBank:WP_311541175.1;Name=WP_311541175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04267.2;locus_tag=RM588_RS11025;product=aKG-HExxH-type peptide beta-hydroxylase;protein_id=WP_311541175.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	13503	14705	.	+	.	ID=gene-RM588_RS11030;Name=RM588_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11030;old_locus_tag=RM588_11025
NZ_JAVRJR010000012.1	Protein Homology	CDS	13503	14705	.	+	0	ID=cds-WP_311541174.1;Parent=gene-RM588_RS11030;Dbxref=GenBank:WP_311541174.1;Name=WP_311541174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465840.1;locus_tag=RM588_RS11030;product=MFS transporter;protein_id=WP_311541174.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	15258	15716	.	-	.	ID=gene-RM588_RS11035;Name=RM588_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11035;old_locus_tag=RM588_11030
NZ_JAVRJR010000012.1	Protein Homology	CDS	15258	15716	.	-	0	ID=cds-WP_252594884.1;Parent=gene-RM588_RS11035;Dbxref=GenBank:WP_252594884.1;Name=WP_252594884.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM588_RS11035;product=GNAT family N-acetyltransferase;protein_id=WP_252594884.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	15720	16937	.	-	.	ID=gene-RM588_RS11040;Name=RM588_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11040;old_locus_tag=RM588_11035
NZ_JAVRJR010000012.1	Protein Homology	CDS	15720	16937	.	-	0	ID=cds-WP_311541173.1;Parent=gene-RM588_RS11040;Dbxref=GenBank:WP_311541173.1;Name=WP_311541173.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM588_RS11040;product=MFS transporter;protein_id=WP_311541173.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	16959	18233	.	-	.	ID=gene-RM588_RS11045;Name=RM588_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11045;old_locus_tag=RM588_11040
NZ_JAVRJR010000012.1	Protein Homology	CDS	16959	18233	.	-	0	ID=cds-WP_311541172.1;Parent=gene-RM588_RS11045;Dbxref=GenBank:WP_311541172.1;Name=WP_311541172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052102.2;locus_tag=RM588_RS11045;product=class III lanthionine synthetase LanKC N-terminal domain-containing protein;protein_id=WP_311541172.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	pseudogene	18590	18703	.	+	.	ID=gene-RM588_RS11050;Name=RM588_RS11050;end_range=18703,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11050;old_locus_tag=RM588_11045;partial=true;pseudo=true
NZ_JAVRJR010000012.1	Protein Homology	CDS	18590	18703	.	+	0	ID=cds-RM588_RS11050;Parent=gene-RM588_RS11050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18703,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568510.1;locus_tag=RM588_RS11050;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	pseudogene	18696	18851	.	-	.	ID=gene-RM588_RS11055;Name=RM588_RS11055;end_range=18851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11055;old_locus_tag=RM588_11050;partial=true;pseudo=true;start_range=.,18696
NZ_JAVRJR010000012.1	Protein Homology	CDS	18696	18851	.	-	0	ID=cds-RM588_RS11055;Parent=gene-RM588_RS11055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=18851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=RM588_RS11055;partial=true;product=recombinase family protein;pseudo=true;start_range=.,18696;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	18890	19726	.	-	.	ID=gene-RM588_RS11060;Name=RM588_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11060;old_locus_tag=RM588_11055
NZ_JAVRJR010000012.1	Protein Homology	CDS	18890	19726	.	-	0	ID=cds-WP_252594877.1;Parent=gene-RM588_RS11060;Dbxref=GenBank:WP_252594877.1;Name=WP_252594877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528718.1;locus_tag=RM588_RS11060;product=DUF5677 domain-containing protein;protein_id=WP_252594877.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	19786	20040	.	-	.	ID=gene-RM588_RS11065;Name=RM588_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11065;old_locus_tag=RM588_11060
NZ_JAVRJR010000012.1	GeneMarkS-2+	CDS	19786	20040	.	-	0	ID=cds-WP_252594875.1;Parent=gene-RM588_RS11065;Dbxref=GenBank:WP_252594875.1;Name=WP_252594875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11065;product=hypothetical protein;protein_id=WP_252594875.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	20362	20676	.	-	.	ID=gene-RM588_RS11070;Name=RM588_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11070;old_locus_tag=RM588_11065
NZ_JAVRJR010000012.1	Protein Homology	CDS	20362	20676	.	-	0	ID=cds-WP_311541171.1;Parent=gene-RM588_RS11070;Dbxref=GenBank:WP_311541171.1;Name=WP_311541171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167417.1;locus_tag=RM588_RS11070;product=hypothetical protein;protein_id=WP_311541171.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	20669	21565	.	-	.	ID=gene-RM588_RS11075;Name=RM588_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11075;old_locus_tag=RM588_11070
NZ_JAVRJR010000012.1	Protein Homology	CDS	20669	21565	.	-	0	ID=cds-WP_311541170.1;Parent=gene-RM588_RS11075;Dbxref=GenBank:WP_311541170.1;Name=WP_311541170.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167418.1;locus_tag=RM588_RS11075;product=ParA family protein;protein_id=WP_311541170.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	22227	23210	.	+	.	ID=gene-RM588_RS11080;Name=RM588_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11080;old_locus_tag=RM588_11075
NZ_JAVRJR010000012.1	Protein Homology	CDS	22227	23210	.	+	0	ID=cds-WP_311541169.1;Parent=gene-RM588_RS11080;Dbxref=GenBank:WP_311541169.1;Name=WP_311541169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471380.1;locus_tag=RM588_RS11080;product=replication initiator protein A;protein_id=WP_311541169.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	23498	23803	.	+	.	ID=gene-RM588_RS11085;Name=RM588_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11085;old_locus_tag=RM588_11080
NZ_JAVRJR010000012.1	Protein Homology	CDS	23498	23803	.	+	0	ID=cds-WP_107378013.1;Parent=gene-RM588_RS11085;Dbxref=GenBank:WP_107378013.1;Name=WP_107378013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490323.1;locus_tag=RM588_RS11085;product=hypothetical protein;protein_id=WP_107378013.1;transl_table=11
NZ_JAVRJR010000012.1	RefSeq	gene	24223	24723	.	-	.	ID=gene-RM588_RS11090;Name=RM588_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11090;old_locus_tag=RM588_11085
NZ_JAVRJR010000012.1	GeneMarkS-2+	CDS	24223	24723	.	-	0	ID=cds-WP_311541167.1;Parent=gene-RM588_RS11090;Dbxref=GenBank:WP_311541167.1;Name=WP_311541167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11090;product=hypothetical protein;protein_id=WP_311541167.1;transl_table=11
##sequence-region NZ_JAVRJR010000013.1 1 22733
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000013.1	RefSeq	region	1	22733	.	+	.	ID=NZ_JAVRJR010000013.1:1..22733;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000013.1	RefSeq	gene	97	228	.	-	.	ID=gene-RM588_RS11095;Name=RM588_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11095;old_locus_tag=RM588_11090
NZ_JAVRJR010000013.1	Protein Homology	CDS	97	228	.	-	0	ID=cds-WP_069191677.1;Parent=gene-RM588_RS11095;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM588_RS11095;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	293	424	.	-	.	ID=gene-RM588_RS11100;Name=RM588_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11100;old_locus_tag=RM588_11095
NZ_JAVRJR010000013.1	Protein Homology	CDS	293	424	.	-	0	ID=cds-WP_069191677.1-2;Parent=gene-RM588_RS11100;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM588_RS11100;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	889	963	.	+	.	ID=gene-RM588_RS11395;Name=RM588_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11395
NZ_JAVRJR010000013.1	Protein Homology	CDS	889	963	.	+	0	ID=cds-WP_107359458.1;Parent=gene-RM588_RS11395;Dbxref=GenBank:WP_107359458.1;Name=WP_107359458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033425.2;locus_tag=RM588_RS11395;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_107359458.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	1167	2471	.	+	.	ID=gene-RM588_RS11105;Name=RM588_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11105;old_locus_tag=RM588_11100
NZ_JAVRJR010000013.1	Protein Homology	CDS	1167	2471	.	+	0	ID=cds-WP_037573144.1;Parent=gene-RM588_RS11105;Dbxref=GenBank:WP_037573144.1;Name=WP_037573144.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169122.1;locus_tag=RM588_RS11105;product=TrkH family potassium uptake protein;protein_id=WP_037573144.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	2521	2967	.	-	.	ID=gene-RM588_RS11110;Name=RM588_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11110;old_locus_tag=RM588_11105
NZ_JAVRJR010000013.1	Protein Homology	CDS	2521	2967	.	-	0	ID=cds-WP_233654924.1;Parent=gene-RM588_RS11110;Dbxref=GenBank:WP_233654924.1;Name=WP_233654924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900028.1;locus_tag=RM588_RS11110;product=VOC family protein;protein_id=WP_233654924.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	3154	3600	.	+	.	ID=gene-RM588_RS11115;Name=RM588_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11115;old_locus_tag=RM588_11110
NZ_JAVRJR010000013.1	GeneMarkS-2+	CDS	3154	3600	.	+	0	ID=cds-WP_037573140.1;Parent=gene-RM588_RS11115;Dbxref=GenBank:WP_037573140.1;Name=WP_037573140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11115;product=hypothetical protein;protein_id=WP_037573140.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	5401	5474	.	-	.	ID=gene-RM588_RS11120;Name=RM588_RS11120;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS11120;old_locus_tag=RM588_11115
NZ_JAVRJR010000013.1	tRNAscan-SE	tRNA	5401	5474	.	-	.	ID=rna-RM588_RS11120;Parent=gene-RM588_RS11120;anticodon=(pos:complement(5438..5440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS11120;product=tRNA-Arg
NZ_JAVRJR010000013.1	tRNAscan-SE	exon	5401	5474	.	-	.	ID=exon-RM588_RS11120-1;Parent=rna-RM588_RS11120;anticodon=(pos:complement(5438..5440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS11120;product=tRNA-Arg
NZ_JAVRJR010000013.1	RefSeq	gene	5836	7083	.	+	.	ID=gene-RM588_RS11125;Name=RM588_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11125;old_locus_tag=RM588_11120
NZ_JAVRJR010000013.1	Protein Homology	CDS	5836	7083	.	+	0	ID=cds-WP_037573137.1;Parent=gene-RM588_RS11125;Dbxref=GenBank:WP_037573137.1;Name=WP_037573137.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275952.1;locus_tag=RM588_RS11125;product=aminoacyltransferase;protein_id=WP_037573137.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	7237	8094	.	-	.	ID=gene-RM588_RS11130;Name=RM588_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11130;old_locus_tag=RM588_11125
NZ_JAVRJR010000013.1	Protein Homology	CDS	7237	8094	.	-	0	ID=cds-WP_103159602.1;Parent=gene-RM588_RS11130;Dbxref=GenBank:WP_103159602.1;Name=WP_103159602.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.8;locus_tag=RM588_RS11130;product=M23 family metallopeptidase;protein_id=WP_103159602.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	8393	8755	.	+	.	ID=gene-RM588_RS11135;Name=RM588_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11135;old_locus_tag=RM588_11130
NZ_JAVRJR010000013.1	Protein Homology	CDS	8393	8755	.	+	0	ID=cds-WP_051604953.1;Parent=gene-RM588_RS11135;Dbxref=GenBank:WP_051604953.1;Name=WP_051604953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022980.7;locus_tag=RM588_RS11135;product=complement inhibitor SCIN family protein;protein_id=WP_051604953.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	9060	9365	.	+	.	ID=gene-RM588_RS11140;Name=RM588_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11140;old_locus_tag=RM588_11135
NZ_JAVRJR010000013.1	GeneMarkS-2+	CDS	9060	9365	.	+	0	ID=cds-WP_037571624.1;Parent=gene-RM588_RS11140;Dbxref=GenBank:WP_037571624.1;Name=WP_037571624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11140;product=hypothetical protein;protein_id=WP_037571624.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	9603	10106	.	-	.	ID=gene-RM588_RS11145;Name=RM588_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11145;old_locus_tag=RM588_11140
NZ_JAVRJR010000013.1	Protein Homology	CDS	9603	10106	.	-	0	ID=cds-WP_037571627.1;Parent=gene-RM588_RS11145;Dbxref=GenBank:WP_037571627.1;Name=WP_037571627.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830180.1;locus_tag=RM588_RS11145;product=YfcE family phosphodiesterase;protein_id=WP_037571627.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	10103	10687	.	-	.	ID=gene-RM588_RS11150;Name=RM588_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11150;old_locus_tag=RM588_11145
NZ_JAVRJR010000013.1	Protein Homology	CDS	10103	10687	.	-	0	ID=cds-WP_037571629.1;Parent=gene-RM588_RS11150;Dbxref=GenBank:WP_037571629.1;Name=WP_037571629.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483628.1;locus_tag=RM588_RS11150;product=XTP/dITP diphosphatase;protein_id=WP_037571629.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	10691	11500	.	-	.	ID=gene-RM588_RS11155;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=RM588_RS11155;old_locus_tag=RM588_11150
NZ_JAVRJR010000013.1	Protein Homology	CDS	10691	11500	.	-	0	ID=cds-WP_037571631.1;Parent=gene-RM588_RS11155;Dbxref=GenBank:WP_037571631.1;Name=WP_037571631.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424808.1;locus_tag=RM588_RS11155;product=glutamate racemase;protein_id=WP_037571631.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	11727	12566	.	-	.	ID=gene-RM588_RS11160;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=RM588_RS11160;old_locus_tag=RM588_11155
NZ_JAVRJR010000013.1	Protein Homology	CDS	11727	12566	.	-	0	ID=cds-WP_037571633.1;Parent=gene-RM588_RS11160;Dbxref=GenBank:WP_037571633.1;Name=WP_037571633.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507957.1;locus_tag=RM588_RS11160;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_037571633.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	12566	14332	.	-	.	ID=gene-RM588_RS11165;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=RM588_RS11165;old_locus_tag=RM588_11160
NZ_JAVRJR010000013.1	Protein Homology	CDS	12566	14332	.	-	0	ID=cds-WP_037571637.1;Parent=gene-RM588_RS11165;Dbxref=GenBank:WP_037571637.1;Name=WP_037571637.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=RM588_RS11165;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_037571637.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	14451	15062	.	-	.	ID=gene-RM588_RS11170;Name=RM588_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11170;old_locus_tag=RM588_11165
NZ_JAVRJR010000013.1	Protein Homology	CDS	14451	15062	.	-	0	ID=cds-WP_037571652.1;Parent=gene-RM588_RS11170;Dbxref=GenBank:WP_037571652.1;Name=WP_037571652.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449979.1;locus_tag=RM588_RS11170;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_037571652.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	15221	17011	.	-	.	ID=gene-RM588_RS11175;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=RM588_RS11175;old_locus_tag=RM588_11170
NZ_JAVRJR010000013.1	Protein Homology	CDS	15221	17011	.	-	0	ID=cds-WP_037571654.1;Parent=gene-RM588_RS11175;Dbxref=GenBank:WP_037571654.1;Name=WP_037571654.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455471.1;locus_tag=RM588_RS11175;product=excinuclease ABC subunit UvrC;protein_id=WP_037571654.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	17137	17451	.	-	.	ID=gene-RM588_RS11180;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=RM588_RS11180;old_locus_tag=RM588_11175
NZ_JAVRJR010000013.1	Protein Homology	CDS	17137	17451	.	-	0	ID=cds-WP_037571657.1;Parent=gene-RM588_RS11180;Dbxref=GenBank:WP_037571657.1;Name=WP_037571657.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510893.1;locus_tag=RM588_RS11180;product=thioredoxin;protein_id=WP_037571657.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	17527	19875	.	-	.	ID=gene-RM588_RS11185;Name=RM588_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11185;old_locus_tag=RM588_11180
NZ_JAVRJR010000013.1	Protein Homology	CDS	17527	19875	.	-	0	ID=cds-WP_107367081.1;Parent=gene-RM588_RS11185;Dbxref=GenBank:WP_107367081.1;Name=WP_107367081.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=RM588_RS11185;product=endonuclease MutS2;protein_id=WP_107367081.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	20052	21755	.	-	.	ID=gene-RM588_RS11190;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=RM588_RS11190;old_locus_tag=RM588_11185
NZ_JAVRJR010000013.1	Protein Homology	CDS	20052	21755	.	-	0	ID=cds-WP_311548223.1;Parent=gene-RM588_RS11190;Dbxref=GenBank:WP_311548223.1;Name=WP_311548223.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930709.1;locus_tag=RM588_RS11190;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_311548223.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	21829	22350	.	-	.	ID=gene-RM588_RS11195;Name=RM588_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11195;old_locus_tag=RM588_11190
NZ_JAVRJR010000013.1	Protein Homology	CDS	21829	22350	.	-	0	ID=cds-WP_037571662.1;Parent=gene-RM588_RS11195;Dbxref=GenBank:WP_037571662.1;Name=WP_037571662.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: protein motif:HMM:NF014704.7;locus_tag=RM588_RS11195;product=CvpA family protein;protein_id=WP_037571662.1;transl_table=11
NZ_JAVRJR010000013.1	RefSeq	gene	22352	22618	.	-	.	ID=gene-RM588_RS11200;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=RM588_RS11200;old_locus_tag=RM588_11195
NZ_JAVRJR010000013.1	Protein Homology	CDS	22352	22618	.	-	0	ID=cds-WP_037571667.1;Parent=gene-RM588_RS11200;Dbxref=GenBank:WP_037571667.1;Name=WP_037571667.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830081.1;locus_tag=RM588_RS11200;product=cell division protein ZapA;protein_id=WP_037571667.1;transl_table=11
##sequence-region NZ_JAVRJR010000014.1 1 6368
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000014.1	RefSeq	region	1	6368	.	+	.	ID=NZ_JAVRJR010000014.1:1..6368;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000014.1	RefSeq	gene	161	970	.	+	.	ID=gene-RM588_RS11205;Name=RM588_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11205;old_locus_tag=RM588_11200
NZ_JAVRJR010000014.1	Protein Homology	CDS	161	970	.	+	0	ID=cds-WP_204176206.1;Parent=gene-RM588_RS11205;Dbxref=GenBank:WP_204176206.1;Name=WP_204176206.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829696.1;locus_tag=RM588_RS11205;product=protein rep;protein_id=WP_204176206.1;transl_table=11
NZ_JAVRJR010000014.1	RefSeq	gene	1074	1136	.	+	.	ID=gene-RM588_RS11400;Name=RM588_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11400
NZ_JAVRJR010000014.1	Protein Homology	CDS	1074	1136	.	+	0	ID=cds-WP_012779615.1;Parent=gene-RM588_RS11400;Dbxref=GenBank:WP_012779615.1;Name=WP_012779615.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_167840811.1;locus_tag=RM588_RS11400;product=tetracycline resistance efflux system leader peptide;protein_id=WP_012779615.1;transl_table=11
NZ_JAVRJR010000014.1	RefSeq	gene	1170	2546	.	+	.	ID=gene-RM588_RS11210;Name=tet(L);gbkey=Gene;gene=tet(L);gene_biotype=protein_coding;locus_tag=RM588_RS11210;old_locus_tag=RM588_11205
NZ_JAVRJR010000014.1	Protein Homology	CDS	1170	2546	.	+	0	ID=cds-WP_001574277.1;Parent=gene-RM588_RS11210;Dbxref=GenBank:WP_001574277.1;Name=WP_001574277.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(L);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574277.1;locus_tag=RM588_RS11210;product=tetracycline efflux MFS transporter Tet(L);protein_id=WP_001574277.1;transl_table=11
NZ_JAVRJR010000014.1	RefSeq	gene	3190	3924	.	-	.	ID=gene-RM588_RS11215;Name=RM588_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11215;old_locus_tag=RM588_11210
NZ_JAVRJR010000014.1	Protein Homology	CDS	3190	3924	.	-	0	ID=cds-WP_002345002.1;Parent=gene-RM588_RS11215;Dbxref=GenBank:WP_002345002.1;Name=WP_002345002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011282421.1;locus_tag=RM588_RS11215;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T);protein_id=WP_002345002.1;transl_table=11
NZ_JAVRJR010000014.1	RefSeq	gene	4345	5556	.	+	.	ID=gene-RM588_RS11220;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM588_RS11220;old_locus_tag=RM588_11215
NZ_JAVRJR010000014.1	Protein Homology	CDS	4345	5556	.	+	0	ID=cds-WP_032494831.1;Parent=gene-RM588_RS11220;Dbxref=GenBank:WP_032494831.1;Name=WP_032494831.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF013258.7;locus_tag=RM588_RS11220;product=MobV family relaxase;protein_id=WP_032494831.1;transl_table=11
##sequence-region NZ_JAVRJR010000015.1 1 4719
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000015.1	RefSeq	region	1	4719	.	+	.	ID=NZ_JAVRJR010000015.1:1..4719;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000015.1	RefSeq	gene	99	335	.	+	.	ID=gene-RM588_RS11225;Name=RM588_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11225;old_locus_tag=RM588_11220
NZ_JAVRJR010000015.1	GeneMarkS-2+	CDS	99	335	.	+	0	ID=cds-WP_311541192.1;Parent=gene-RM588_RS11225;Dbxref=GenBank:WP_311541192.1;Name=WP_311541192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11225;product=hypothetical protein;protein_id=WP_311541192.1;transl_table=11
NZ_JAVRJR010000015.1	RefSeq	gene	434	514	.	-	.	ID=gene-RM588_RS11230;Name=RM588_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11230;old_locus_tag=RM588_11225
NZ_JAVRJR010000015.1	Protein Homology	CDS	434	514	.	-	0	ID=cds-WP_311541493.1;Parent=gene-RM588_RS11230;Dbxref=GenBank:WP_311541493.1;Name=WP_311541493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024729.7;locus_tag=RM588_RS11230;product=IS3 family transposase;protein_id=WP_311541493.1;transl_table=11
NZ_JAVRJR010000015.1	RefSeq	pseudogene	500	852	.	-	.	ID=gene-RM588_RS11235;Name=RM588_RS11235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11235;old_locus_tag=RM588_11230;partial=true;pseudo=true;start_range=.,500
NZ_JAVRJR010000015.1	Protein Homology	CDS	500	852	.	-	0	ID=cds-RM588_RS11235;Parent=gene-RM588_RS11235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=RM588_RS11235;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,500;transl_table=11
NZ_JAVRJR010000015.1	RefSeq	gene	1318	2514	.	-	.	ID=gene-RM588_RS11240;Name=RM588_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11240;old_locus_tag=RM588_11235
NZ_JAVRJR010000015.1	Protein Homology	CDS	1318	2514	.	-	0	ID=cds-WP_311541193.1;Parent=gene-RM588_RS11240;Dbxref=GenBank:WP_311541193.1;Name=WP_311541193.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728638.1;locus_tag=RM588_RS11240;product=MFS transporter;protein_id=WP_311541193.1;transl_table=11
NZ_JAVRJR010000015.1	RefSeq	gene	2965	3582	.	-	.	ID=gene-RM588_RS11245;Name=RM588_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11245;old_locus_tag=RM588_11240
NZ_JAVRJR010000015.1	Protein Homology	CDS	2965	3582	.	-	0	ID=cds-WP_311541195.1;Parent=gene-RM588_RS11245;Dbxref=GenBank:WP_311541195.1;Name=WP_311541195.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458044.1;locus_tag=RM588_RS11245;product=LysE/ArgO family amino acid transporter;protein_id=WP_311541195.1;transl_table=11
NZ_JAVRJR010000015.1	RefSeq	gene	3586	4557	.	-	.	ID=gene-RM588_RS11250;Name=RM588_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11250;old_locus_tag=RM588_11245
NZ_JAVRJR010000015.1	Protein Homology	CDS	3586	4557	.	-	0	ID=cds-WP_311541196.1;Parent=gene-RM588_RS11250;Dbxref=GenBank:WP_311541196.1;Name=WP_311541196.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053810.1;locus_tag=RM588_RS11250;product=fatty acid desaturase;protein_id=WP_311541196.1;transl_table=11
##sequence-region NZ_JAVRJR010000016.1 1 3172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000016.1	RefSeq	region	1	3172	.	+	.	ID=NZ_JAVRJR010000016.1:1..3172;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000016.1	RefSeq	gene	187	3113	.	+	.	ID=gene-RM588_RS11255;Name=RM588_RS11255;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM588_RS11255;old_locus_tag=RM588_11250
NZ_JAVRJR010000016.1	cmsearch	rRNA	187	3113	.	+	.	ID=rna-RM588_RS11255;Parent=gene-RM588_RS11255;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS11255;product=23S ribosomal RNA
NZ_JAVRJR010000016.1	cmsearch	exon	187	3113	.	+	.	ID=exon-RM588_RS11255-1;Parent=rna-RM588_RS11255;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS11255;product=23S ribosomal RNA
##sequence-region NZ_JAVRJR010000017.1 1 1920
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000017.1	RefSeq	region	1	1920	.	+	.	ID=NZ_JAVRJR010000017.1:1..1920;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000017.1	RefSeq	gene	247	789	.	-	.	ID=gene-RM588_RS11260;Name=RM588_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11260;old_locus_tag=RM588_11255
NZ_JAVRJR010000017.1	GeneMarkS-2+	CDS	247	789	.	-	0	ID=cds-WP_107368149.1;Parent=gene-RM588_RS11260;Dbxref=GenBank:WP_107368149.1;Name=WP_107368149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11260;product=hypothetical protein;protein_id=WP_107368149.1;transl_table=11
NZ_JAVRJR010000017.1	RefSeq	gene	1399	1599	.	+	.	ID=gene-RM588_RS11265;Name=RM588_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11265;old_locus_tag=RM588_11260
NZ_JAVRJR010000017.1	Protein Homology	CDS	1399	1599	.	+	0	ID=cds-WP_031795395.1;Parent=gene-RM588_RS11265;Dbxref=GenBank:WP_031795395.1;Name=WP_031795395.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477819.1;locus_tag=RM588_RS11265;product=cold-shock protein;protein_id=WP_031795395.1;transl_table=11
##sequence-region NZ_JAVRJR010000018.1 1 1330
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000018.1	RefSeq	region	1	1330	.	+	.	ID=NZ_JAVRJR010000018.1:1..1330;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000018.1	RefSeq	pseudogene	1	1330	.	+	.	ID=gene-RM588_RS11270;Name=RM588_RS11270;end_range=1330,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11270;old_locus_tag=RM588_11265;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJR010000018.1	GeneMarkS-2+	CDS	1	1330	.	+	0	ID=cds-RM588_RS11270;Parent=gene-RM588_RS11270;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1330,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11270;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_JAVRJR010000019.1 1 1306
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000019.1	RefSeq	region	1	1306	.	+	.	ID=NZ_JAVRJR010000019.1:1..1306;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000019.1	RefSeq	gene	41	1306	.	-	.	ID=gene-RM588_RS11275;Name=RM588_RS11275;end_range=1306,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM588_RS11275;old_locus_tag=RM588_11270;partial=true
NZ_JAVRJR010000019.1	cmsearch	rRNA	41	1306	.	-	.	ID=rna-RM588_RS11275;Parent=gene-RM588_RS11275;Dbxref=RFAM:RF00177;end_range=1306,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS11275;partial=true;product=16S ribosomal RNA
NZ_JAVRJR010000019.1	cmsearch	exon	41	1306	.	-	.	ID=exon-RM588_RS11275-1;Parent=rna-RM588_RS11275;Dbxref=RFAM:RF00177;end_range=1306,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS11275;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JAVRJR010000001.1 1 693465
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000001.1	RefSeq	region	1	693465	.	+	.	ID=NZ_JAVRJR010000001.1:1..693465;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000001.1	RefSeq	gene	134	248	.	+	.	ID=gene-RM588_RS00005;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM588_RS00005;old_locus_tag=RM588_00005
NZ_JAVRJR010000001.1	cmsearch	rRNA	134	248	.	+	.	ID=rna-RM588_RS00005;Parent=gene-RM588_RS00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS00005;product=5S ribosomal RNA
NZ_JAVRJR010000001.1	cmsearch	exon	134	248	.	+	.	ID=exon-RM588_RS00005-1;Parent=rna-RM588_RS00005;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS00005;product=5S ribosomal RNA
NZ_JAVRJR010000001.1	RefSeq	gene	494	685	.	-	.	ID=gene-RM588_RS00010;Name=RM588_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00010;old_locus_tag=RM588_00010
NZ_JAVRJR010000001.1	Protein Homology	CDS	494	685	.	-	0	ID=cds-WP_105963472.1;Parent=gene-RM588_RS00010;Dbxref=GenBank:WP_105963472.1;Name=WP_105963472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502694.1;locus_tag=RM588_RS00010;product=hypothetical protein;protein_id=WP_105963472.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	828	2168	.	+	.	ID=gene-RM588_RS00015;Name=RM588_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00015;old_locus_tag=RM588_00015
NZ_JAVRJR010000001.1	Protein Homology	CDS	828	2168	.	+	0	ID=cds-WP_103159381.1;Parent=gene-RM588_RS00015;Dbxref=GenBank:WP_103159381.1;Name=WP_103159381.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001644634.1;locus_tag=RM588_RS00015;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_103159381.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	2170	2790	.	+	.	ID=gene-RM588_RS00020;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=RM588_RS00020;old_locus_tag=RM588_00020
NZ_JAVRJR010000001.1	Protein Homology	CDS	2170	2790	.	+	0	ID=cds-WP_037577060.1;Parent=gene-RM588_RS00020;Dbxref=GenBank:WP_037577060.1;Name=WP_037577060.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481884.1;locus_tag=RM588_RS00020;product=dTMP kinase;protein_id=WP_037577060.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	2931	3260	.	+	.	ID=gene-RM588_RS00025;Name=darA;gbkey=Gene;gene=darA;gene_biotype=protein_coding;locus_tag=RM588_RS00025;old_locus_tag=RM588_00025
NZ_JAVRJR010000001.1	Protein Homology	CDS	2931	3260	.	+	0	ID=cds-WP_037577055.1;Parent=gene-RM588_RS00025;Dbxref=GenBank:WP_037577055.1;Name=WP_037577055.1;gbkey=CDS;gene=darA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=RM588_RS00025;product=cyclic di-AMP receptor DarA;protein_id=WP_037577055.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	3432	4361	.	+	.	ID=gene-RM588_RS00030;Name=RM588_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00030;old_locus_tag=RM588_00030
NZ_JAVRJR010000001.1	Protein Homology	CDS	3432	4361	.	+	0	ID=cds-WP_105963474.1;Parent=gene-RM588_RS00030;Dbxref=GenBank:WP_105963474.1;Name=WP_105963474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169138.1;locus_tag=RM588_RS00030;product=DNA polymerase III delta subunit-related protein;protein_id=WP_105963474.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	4367	5170	.	+	.	ID=gene-RM588_RS00035;Name=RM588_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00035;old_locus_tag=RM588_00035
NZ_JAVRJR010000001.1	Protein Homology	CDS	4367	5170	.	+	0	ID=cds-WP_105997008.1;Parent=gene-RM588_RS00035;Dbxref=GenBank:WP_105997008.1;Name=WP_105997008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614820.1;locus_tag=RM588_RS00035;product=PSP1 domain-containing protein;protein_id=WP_105997008.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	5184	5537	.	+	.	ID=gene-RM588_RS00040;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=RM588_RS00040;old_locus_tag=RM588_00040
NZ_JAVRJR010000001.1	Protein Homology	CDS	5184	5537	.	+	0	ID=cds-WP_037577040.1;Parent=gene-RM588_RS00040;Dbxref=GenBank:WP_037577040.1;Name=WP_037577040.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426526.1;locus_tag=RM588_RS00040;product=DNA replication initiation control protein YabA;protein_id=WP_037577040.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	5577	6302	.	+	.	ID=gene-RM588_RS00045;Name=RM588_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00045;old_locus_tag=RM588_00045
NZ_JAVRJR010000001.1	Protein Homology	CDS	5577	6302	.	+	0	ID=cds-WP_103159377.1;Parent=gene-RM588_RS00045;Dbxref=GenBank:WP_103159377.1;Name=WP_103159377.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169135.1;locus_tag=RM588_RS00045;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_103159377.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	6295	6549	.	+	.	ID=gene-RM588_RS00050;Name=RM588_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00050;old_locus_tag=RM588_00050
NZ_JAVRJR010000001.1	Protein Homology	CDS	6295	6549	.	+	0	ID=cds-WP_037577030.1;Parent=gene-RM588_RS00050;Dbxref=GenBank:WP_037577030.1;Name=WP_037577030.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384549.1;locus_tag=RM588_RS00050;product=GIY-YIG nuclease family protein;protein_id=WP_037577030.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	6546	7382	.	+	.	ID=gene-RM588_RS00055;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=RM588_RS00055;old_locus_tag=RM588_00055
NZ_JAVRJR010000001.1	Protein Homology	CDS	6546	7382	.	+	0	ID=cds-WP_037577026.1;Parent=gene-RM588_RS00055;Dbxref=GenBank:WP_037577026.1;Name=WP_037577026.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509790.1;locus_tag=RM588_RS00055;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_037577026.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	7479	9446	.	+	.	ID=gene-RM588_RS00060;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=RM588_RS00060;old_locus_tag=RM588_00060
NZ_JAVRJR010000001.1	Protein Homology	CDS	7479	9446	.	+	0	ID=cds-WP_037577021.1;Parent=gene-RM588_RS00060;Dbxref=GenBank:WP_037577021.1;Name=WP_037577021.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=RM588_RS00060;product=methionine--tRNA ligase;protein_id=WP_037577021.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	9568	10347	.	+	.	ID=gene-RM588_RS00065;Name=RM588_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00065;old_locus_tag=RM588_00065
NZ_JAVRJR010000001.1	Protein Homology	CDS	9568	10347	.	+	0	ID=cds-WP_105963478.1;Parent=gene-RM588_RS00065;Dbxref=GenBank:WP_105963478.1;Name=WP_105963478.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499041.1;locus_tag=RM588_RS00065;product=TatD family hydrolase;protein_id=WP_105963478.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	10365	10904	.	+	.	ID=gene-RM588_RS00070;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=RM588_RS00070;old_locus_tag=RM588_00070
NZ_JAVRJR010000001.1	Protein Homology	CDS	10365	10904	.	+	0	ID=cds-WP_037577013.1;Parent=gene-RM588_RS00070;Dbxref=GenBank:WP_037577013.1;Name=WP_037577013.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614813.1;locus_tag=RM588_RS00070;product=ribonuclease M5;protein_id=WP_037577013.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	10912	11802	.	+	.	ID=gene-RM588_RS00075;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=RM588_RS00075;old_locus_tag=RM588_00075
NZ_JAVRJR010000001.1	Protein Homology	CDS	10912	11802	.	+	0	ID=cds-WP_103159375.1;Parent=gene-RM588_RS00075;Dbxref=GenBank:WP_103159375.1;Name=WP_103159375.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165022.1;locus_tag=RM588_RS00075;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_103159375.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	11902	12168	.	+	.	ID=gene-RM588_RS00080;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=RM588_RS00080;old_locus_tag=RM588_00080
NZ_JAVRJR010000001.1	Protein Homology	CDS	11902	12168	.	+	0	ID=cds-WP_037577007.1;Parent=gene-RM588_RS00080;Dbxref=GenBank:WP_037577007.1;Name=WP_037577007.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426518.1;locus_tag=RM588_RS00080;product=biofilm formation stimulator Veg;protein_id=WP_037577007.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	12410	13258	.	+	.	ID=gene-RM588_RS00085;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=RM588_RS00085;old_locus_tag=RM588_00085
NZ_JAVRJR010000001.1	Protein Homology	CDS	12410	13258	.	+	0	ID=cds-WP_037577004.1;Parent=gene-RM588_RS00085;Dbxref=GenBank:WP_037577004.1;Name=WP_037577004.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276766.1;locus_tag=RM588_RS00085;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_037577004.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	13281	14108	.	+	.	ID=gene-RM588_RS00090;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=RM588_RS00090;old_locus_tag=RM588_00090
NZ_JAVRJR010000001.1	Protein Homology	CDS	13281	14108	.	+	0	ID=cds-WP_037577001.1;Parent=gene-RM588_RS00090;Dbxref=GenBank:WP_037577001.1;Name=WP_037577001.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384564.1;locus_tag=RM588_RS00090;product=pur operon repressor;protein_id=WP_037577001.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	14126	14506	.	+	.	ID=gene-RM588_RS00095;Name=RM588_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00095;old_locus_tag=RM588_00095
NZ_JAVRJR010000001.1	Protein Homology	CDS	14126	14506	.	+	0	ID=cds-WP_311548039.1;Parent=gene-RM588_RS00095;Dbxref=GenBank:WP_311548039.1;Name=WP_311548039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169426.1;locus_tag=RM588_RS00095;product=RidA family protein;protein_id=WP_311548039.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	14570	14884	.	+	.	ID=gene-RM588_RS00100;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=RM588_RS00100;old_locus_tag=RM588_00100
NZ_JAVRJR010000001.1	Protein Homology	CDS	14570	14884	.	+	0	ID=cds-WP_037576996.1;Parent=gene-RM588_RS00100;Dbxref=GenBank:WP_037576996.1;Name=WP_037576996.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499048.1;locus_tag=RM588_RS00100;product=septation regulator SpoVG;protein_id=WP_037576996.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	15146	16513	.	+	.	ID=gene-RM588_RS00105;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=RM588_RS00105;old_locus_tag=RM588_00105
NZ_JAVRJR010000001.1	Protein Homology	CDS	15146	16513	.	+	0	ID=cds-WP_105963480.1;Parent=gene-RM588_RS00105;Dbxref=GenBank:WP_105963480.1;Name=WP_105963480.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614806.1;locus_tag=RM588_RS00105;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_105963480.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	16589	17554	.	+	.	ID=gene-RM588_RS00110;Name=RM588_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00110;old_locus_tag=RM588_00110
NZ_JAVRJR010000001.1	Protein Homology	CDS	16589	17554	.	+	0	ID=cds-WP_037576991.1;Parent=gene-RM588_RS00110;Dbxref=GenBank:WP_037576991.1;Name=WP_037576991.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=RM588_RS00110;product=ribose-phosphate diphosphokinase;protein_id=WP_037576991.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	17693	18367	.	+	.	ID=gene-RM588_RS00115;Name=RM588_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00115;old_locus_tag=RM588_00115
NZ_JAVRJR010000001.1	Protein Homology	CDS	17693	18367	.	+	0	ID=cds-WP_103159372.1;Parent=gene-RM588_RS00115;Dbxref=GenBank:WP_103159372.1;Name=WP_103159372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465710.1;locus_tag=RM588_RS00115;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_103159372.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	18512	19078	.	+	.	ID=gene-RM588_RS00120;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=RM588_RS00120;old_locus_tag=RM588_00120
NZ_JAVRJR010000001.1	Protein Homology	CDS	18512	19078	.	+	0	ID=cds-WP_037576985.1;Parent=gene-RM588_RS00120;Dbxref=GenBank:WP_037576985.1;Name=WP_037576985.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451736.1;locus_tag=RM588_RS00120;product=aminoacyl-tRNA hydrolase;protein_id=WP_037576985.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	19090	22590	.	+	.	ID=gene-RM588_RS00125;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=RM588_RS00125;old_locus_tag=RM588_00125
NZ_JAVRJR010000001.1	Protein Homology	CDS	19090	22590	.	+	0	ID=cds-WP_375713812.1;Parent=gene-RM588_RS00125;Dbxref=GenBank:WP_375713812.1;Name=WP_375713812.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=RM588_RS00125;product=transcription-repair coupling factor;protein_id=WP_375713812.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	22580	24109	.	+	.	ID=gene-RM588_RS00130;Name=RM588_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00130;old_locus_tag=RM588_00130
NZ_JAVRJR010000001.1	Protein Homology	CDS	22580	24109	.	+	0	ID=cds-WP_037576978.1;Parent=gene-RM588_RS00130;Dbxref=GenBank:WP_037576978.1;Name=WP_037576978.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169419.1;locus_tag=RM588_RS00130;product=polysaccharide biosynthesis protein;protein_id=WP_037576978.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	24106	25293	.	+	.	ID=gene-RM588_RS00135;Name=RM588_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00135;old_locus_tag=RM588_00135
NZ_JAVRJR010000001.1	Protein Homology	CDS	24106	25293	.	+	0	ID=cds-WP_105963482.1;Parent=gene-RM588_RS00135;Dbxref=GenBank:WP_105963482.1;Name=WP_105963482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165012.1;locus_tag=RM588_RS00135;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_105963482.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	25280	25537	.	+	.	ID=gene-RM588_RS00140;Name=RM588_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00140;old_locus_tag=RM588_00140
NZ_JAVRJR010000001.1	Protein Homology	CDS	25280	25537	.	+	0	ID=cds-WP_037576972.1;Parent=gene-RM588_RS00140;Dbxref=GenBank:WP_037576972.1;Name=WP_037576972.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436795.1;locus_tag=RM588_RS00140;product=RNA-binding S4 domain-containing protein;protein_id=WP_037576972.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	25562	25951	.	+	.	ID=gene-RM588_RS00145;Name=RM588_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00145;old_locus_tag=RM588_00145
NZ_JAVRJR010000001.1	Protein Homology	CDS	25562	25951	.	+	0	ID=cds-WP_037576970.1;Parent=gene-RM588_RS00145;Dbxref=GenBank:WP_037576970.1;Name=WP_037576970.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303866.1;locus_tag=RM588_RS00145;product=FtsB family cell division protein;protein_id=WP_037576970.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	26171	26548	.	+	.	ID=gene-RM588_RS00150;Name=RM588_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00150;old_locus_tag=RM588_00150
NZ_JAVRJR010000001.1	Protein Homology	CDS	26171	26548	.	+	0	ID=cds-WP_037576967.1;Parent=gene-RM588_RS00150;Dbxref=GenBank:WP_037576967.1;Name=WP_037576967.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=RM588_RS00150;product=S1 domain-containing RNA-binding protein;protein_id=WP_037576967.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	26618	27901	.	+	.	ID=gene-RM588_RS00155;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=RM588_RS00155;old_locus_tag=RM588_00155
NZ_JAVRJR010000001.1	Protein Homology	CDS	26618	27901	.	+	0	ID=cds-WP_103159368.1;Parent=gene-RM588_RS00155;Dbxref=GenBank:WP_103159368.1;Name=WP_103159368.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426503.1;locus_tag=RM588_RS00155;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_103159368.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	27891	28430	.	+	.	ID=gene-RM588_RS00160;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=RM588_RS00160;old_locus_tag=RM588_00160
NZ_JAVRJR010000001.1	Protein Homology	CDS	27891	28430	.	+	0	ID=cds-WP_103159367.1;Parent=gene-RM588_RS00160;Dbxref=GenBank:WP_103159367.1;Name=WP_103159367.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176412.1;locus_tag=RM588_RS00160;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_103159367.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	28576	30720	.	+	.	ID=gene-RM588_RS00165;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=RM588_RS00165;old_locus_tag=RM588_00165
NZ_JAVRJR010000001.1	Protein Homology	CDS	28576	30720	.	+	0	ID=cds-WP_103159366.1;Parent=gene-RM588_RS00165;Dbxref=GenBank:WP_103159366.1;Name=WP_103159366.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614794.1;locus_tag=RM588_RS00165;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_103159366.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	30865	31758	.	+	.	ID=gene-RM588_RS00170;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=RM588_RS00170;old_locus_tag=RM588_00170
NZ_JAVRJR010000001.1	Protein Homology	CDS	30865	31758	.	+	0	ID=cds-WP_105963485.1;Parent=gene-RM588_RS00170;Dbxref=GenBank:WP_105963485.1;Name=WP_105963485.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484191.1;locus_tag=RM588_RS00170;product=Hsp33 family molecular chaperone HslO;protein_id=WP_105963485.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	31928	32857	.	+	.	ID=gene-RM588_RS00175;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=RM588_RS00175;old_locus_tag=RM588_00175
NZ_JAVRJR010000001.1	Protein Homology	CDS	31928	32857	.	+	0	ID=cds-WP_311539577.1;Parent=gene-RM588_RS00175;Dbxref=GenBank:WP_311539577.1;Name=WP_311539577.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426499.1;locus_tag=RM588_RS00175;product=cysteine synthase A;protein_id=WP_311539577.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	33171	33962	.	+	.	ID=gene-RM588_RS00180;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=RM588_RS00180;old_locus_tag=RM588_00180
NZ_JAVRJR010000001.1	Protein Homology	CDS	33171	33962	.	+	0	ID=cds-WP_037576946.1;Parent=gene-RM588_RS00180;Dbxref=GenBank:WP_037576946.1;Name=WP_037576946.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614791.1;locus_tag=RM588_RS00180;product=dihydropteroate synthase;protein_id=WP_037576946.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	33952	34323	.	+	.	ID=gene-RM588_RS00185;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=RM588_RS00185;old_locus_tag=RM588_00185
NZ_JAVRJR010000001.1	Protein Homology	CDS	33952	34323	.	+	0	ID=cds-WP_037576943.1;Parent=gene-RM588_RS00185;Dbxref=GenBank:WP_037576943.1;Name=WP_037576943.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426497.1;locus_tag=RM588_RS00185;product=dihydroneopterin aldolase;protein_id=WP_037576943.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	34316	34795	.	+	.	ID=gene-RM588_RS00190;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=RM588_RS00190;old_locus_tag=RM588_00190
NZ_JAVRJR010000001.1	Protein Homology	CDS	34316	34795	.	+	0	ID=cds-WP_037576940.1;Parent=gene-RM588_RS00190;Dbxref=GenBank:WP_037576940.1;Name=WP_037576940.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499068.1;locus_tag=RM588_RS00190;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_037576940.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	34877	35872	.	+	.	ID=gene-RM588_RS00195;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=RM588_RS00195;old_locus_tag=RM588_00195
NZ_JAVRJR010000001.1	Protein Homology	CDS	34877	35872	.	+	0	ID=cds-WP_107360563.1;Parent=gene-RM588_RS00195;Dbxref=GenBank:WP_107360563.1;Name=WP_107360563.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614788.1;locus_tag=RM588_RS00195;product=tRNA dihydrouridine synthase DusB;protein_id=WP_107360563.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	35892	37379	.	+	.	ID=gene-RM588_RS00200;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=RM588_RS00200;old_locus_tag=RM588_00200
NZ_JAVRJR010000001.1	Protein Homology	CDS	35892	37379	.	+	0	ID=cds-WP_037576935.1;Parent=gene-RM588_RS00200;Dbxref=GenBank:WP_037576935.1;Name=WP_037576935.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=RM588_RS00200;product=lysine--tRNA ligase;protein_id=WP_037576935.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	37769	37883	.	+	.	ID=gene-RM588_RS00205;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM588_RS00205;old_locus_tag=RM588_00205
NZ_JAVRJR010000001.1	cmsearch	rRNA	37769	37883	.	+	.	ID=rna-RM588_RS00205;Parent=gene-RM588_RS00205;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS00205;product=5S ribosomal RNA
NZ_JAVRJR010000001.1	cmsearch	exon	37769	37883	.	+	.	ID=exon-RM588_RS00205-1;Parent=rna-RM588_RS00205;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS00205;product=5S ribosomal RNA
NZ_JAVRJR010000001.1	RefSeq	gene	37893	37968	.	+	.	ID=gene-RM588_RS00210;Name=RM588_RS00210;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00210;old_locus_tag=RM588_00210
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	37893	37968	.	+	.	ID=rna-RM588_RS00210;Parent=gene-RM588_RS00210;anticodon=(pos:37926..37928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00210;product=tRNA-Val
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	37893	37968	.	+	.	ID=exon-RM588_RS00210-1;Parent=rna-RM588_RS00210;anticodon=(pos:37926..37928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00210;product=tRNA-Val
NZ_JAVRJR010000001.1	RefSeq	gene	37976	38051	.	+	.	ID=gene-RM588_RS00215;Name=RM588_RS00215;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00215;old_locus_tag=RM588_00215
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	37976	38051	.	+	.	ID=rna-RM588_RS00215;Parent=gene-RM588_RS00215;anticodon=(pos:38009..38011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00215;product=tRNA-Thr
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	37976	38051	.	+	.	ID=exon-RM588_RS00215-1;Parent=rna-RM588_RS00215;anticodon=(pos:38009..38011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00215;product=tRNA-Thr
NZ_JAVRJR010000001.1	RefSeq	gene	38059	38131	.	+	.	ID=gene-RM588_RS00220;Name=RM588_RS00220;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00220;old_locus_tag=RM588_00220
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38059	38131	.	+	.	ID=rna-RM588_RS00220;Parent=gene-RM588_RS00220;anticodon=(pos:38092..38094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00220;product=tRNA-Lys
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38059	38131	.	+	.	ID=exon-RM588_RS00220-1;Parent=rna-RM588_RS00220;anticodon=(pos:38092..38094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00220;product=tRNA-Lys
NZ_JAVRJR010000001.1	RefSeq	gene	38150	38224	.	+	.	ID=gene-RM588_RS00225;Name=RM588_RS00225;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00225;old_locus_tag=RM588_00225
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38150	38224	.	+	.	ID=rna-RM588_RS00225;Parent=gene-RM588_RS00225;anticodon=(pos:38182..38184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00225;product=tRNA-Gly
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38150	38224	.	+	.	ID=exon-RM588_RS00225-1;Parent=rna-RM588_RS00225;anticodon=(pos:38182..38184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00225;product=tRNA-Gly
NZ_JAVRJR010000001.1	RefSeq	gene	38233	38321	.	+	.	ID=gene-RM588_RS00230;Name=RM588_RS00230;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00230;old_locus_tag=RM588_00230
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38233	38321	.	+	.	ID=rna-RM588_RS00230;Parent=gene-RM588_RS00230;anticodon=(pos:38267..38269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00230;product=tRNA-Leu
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38233	38321	.	+	.	ID=exon-RM588_RS00230-1;Parent=rna-RM588_RS00230;anticodon=(pos:38267..38269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00230;product=tRNA-Leu
NZ_JAVRJR010000001.1	RefSeq	gene	38331	38407	.	+	.	ID=gene-RM588_RS00235;Name=RM588_RS00235;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00235;old_locus_tag=RM588_00235
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38331	38407	.	+	.	ID=rna-RM588_RS00235;Parent=gene-RM588_RS00235;anticodon=(pos:38365..38367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00235;product=tRNA-Arg
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38331	38407	.	+	.	ID=exon-RM588_RS00235-1;Parent=rna-RM588_RS00235;anticodon=(pos:38365..38367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00235;product=tRNA-Arg
NZ_JAVRJR010000001.1	RefSeq	gene	38417	38490	.	+	.	ID=gene-RM588_RS00240;Name=RM588_RS00240;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00240;old_locus_tag=RM588_00240
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38417	38490	.	+	.	ID=rna-RM588_RS00240;Parent=gene-RM588_RS00240;anticodon=(pos:38451..38453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00240;product=tRNA-Pro
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38417	38490	.	+	.	ID=exon-RM588_RS00240-1;Parent=rna-RM588_RS00240;anticodon=(pos:38451..38453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00240;product=tRNA-Pro
NZ_JAVRJR010000001.1	RefSeq	gene	38510	38585	.	+	.	ID=gene-RM588_RS00245;Name=RM588_RS00245;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00245;old_locus_tag=RM588_00245
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38510	38585	.	+	.	ID=rna-RM588_RS00245;Parent=gene-RM588_RS00245;anticodon=(pos:38543..38545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00245;product=tRNA-Ala
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38510	38585	.	+	.	ID=exon-RM588_RS00245-1;Parent=rna-RM588_RS00245;anticodon=(pos:38543..38545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00245;product=tRNA-Ala
NZ_JAVRJR010000001.1	RefSeq	gene	38616	38689	.	+	.	ID=gene-RM588_RS00250;Name=RM588_RS00250;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00250;old_locus_tag=RM588_00250
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38616	38689	.	+	.	ID=rna-RM588_RS00250;Parent=gene-RM588_RS00250;anticodon=(pos:38650..38652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00250;product=tRNA-Met
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38616	38689	.	+	.	ID=exon-RM588_RS00250-1;Parent=rna-RM588_RS00250;anticodon=(pos:38650..38652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00250;product=tRNA-Met
NZ_JAVRJR010000001.1	RefSeq	gene	38718	38791	.	+	.	ID=gene-RM588_RS00255;Name=RM588_RS00255;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00255;old_locus_tag=RM588_00255
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38718	38791	.	+	.	ID=rna-RM588_RS00255;Parent=gene-RM588_RS00255;anticodon=(pos:38752..38754);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00255;product=tRNA-Ile
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38718	38791	.	+	.	ID=exon-RM588_RS00255-1;Parent=rna-RM588_RS00255;anticodon=(pos:38752..38754);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00255;product=tRNA-Ile
NZ_JAVRJR010000001.1	RefSeq	gene	38801	38893	.	+	.	ID=gene-RM588_RS00260;Name=RM588_RS00260;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00260;old_locus_tag=RM588_00260
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38801	38893	.	+	.	ID=rna-RM588_RS00260;Parent=gene-RM588_RS00260;anticodon=(pos:38837..38839);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00260;product=tRNA-Ser
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38801	38893	.	+	.	ID=exon-RM588_RS00260-1;Parent=rna-RM588_RS00260;anticodon=(pos:38837..38839);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00260;product=tRNA-Ser
NZ_JAVRJR010000001.1	RefSeq	gene	38912	38985	.	+	.	ID=gene-RM588_RS00265;Name=RM588_RS00265;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00265;old_locus_tag=RM588_00265
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38912	38985	.	+	.	ID=rna-RM588_RS00265;Parent=gene-RM588_RS00265;anticodon=(pos:38946..38948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00265;product=tRNA-Met
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38912	38985	.	+	.	ID=exon-RM588_RS00265-1;Parent=rna-RM588_RS00265;anticodon=(pos:38946..38948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00265;product=tRNA-Met
NZ_JAVRJR010000001.1	RefSeq	gene	38997	39073	.	+	.	ID=gene-RM588_RS00270;Name=RM588_RS00270;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00270;old_locus_tag=RM588_00270
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	38997	39073	.	+	.	ID=rna-RM588_RS00270;Parent=gene-RM588_RS00270;anticodon=(pos:39031..39033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00270;product=tRNA-Asp
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	38997	39073	.	+	.	ID=exon-RM588_RS00270-1;Parent=rna-RM588_RS00270;anticodon=(pos:39031..39033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00270;product=tRNA-Asp
NZ_JAVRJR010000001.1	RefSeq	gene	39084	39159	.	+	.	ID=gene-RM588_RS00275;Name=RM588_RS00275;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00275;old_locus_tag=RM588_00275
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39084	39159	.	+	.	ID=rna-RM588_RS00275;Parent=gene-RM588_RS00275;anticodon=(pos:39117..39119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00275;product=tRNA-Phe
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39084	39159	.	+	.	ID=exon-RM588_RS00275-1;Parent=rna-RM588_RS00275;anticodon=(pos:39117..39119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00275;product=tRNA-Phe
NZ_JAVRJR010000001.1	RefSeq	gene	39174	39249	.	+	.	ID=gene-RM588_RS00280;Name=RM588_RS00280;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00280;old_locus_tag=RM588_00280
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39174	39249	.	+	.	ID=rna-RM588_RS00280;Parent=gene-RM588_RS00280;anticodon=(pos:39207..39209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00280;product=tRNA-Thr
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39174	39249	.	+	.	ID=exon-RM588_RS00280-1;Parent=rna-RM588_RS00280;anticodon=(pos:39207..39209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00280;product=tRNA-Thr
NZ_JAVRJR010000001.1	RefSeq	gene	39255	39338	.	+	.	ID=gene-RM588_RS00285;Name=RM588_RS00285;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00285;old_locus_tag=RM588_00285
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39255	39338	.	+	.	ID=rna-RM588_RS00285;Parent=gene-RM588_RS00285;anticodon=(pos:39289..39291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00285;product=tRNA-Tyr
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39255	39338	.	+	.	ID=exon-RM588_RS00285-1;Parent=rna-RM588_RS00285;anticodon=(pos:39289..39291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00285;product=tRNA-Tyr
NZ_JAVRJR010000001.1	RefSeq	gene	39346	39419	.	+	.	ID=gene-RM588_RS00290;Name=RM588_RS00290;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00290;old_locus_tag=RM588_00290
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39346	39419	.	+	.	ID=rna-RM588_RS00290;Parent=gene-RM588_RS00290;anticodon=(pos:39378..39380);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00290;product=tRNA-Trp
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39346	39419	.	+	.	ID=exon-RM588_RS00290-1;Parent=rna-RM588_RS00290;anticodon=(pos:39378..39380);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00290;product=tRNA-Trp
NZ_JAVRJR010000001.1	RefSeq	gene	39422	39494	.	+	.	ID=gene-RM588_RS00295;Name=RM588_RS00295;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00295;old_locus_tag=RM588_00295
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39422	39494	.	+	.	ID=rna-RM588_RS00295;Parent=gene-RM588_RS00295;anticodon=(pos:39455..39457);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00295;product=tRNA-His
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39422	39494	.	+	.	ID=exon-RM588_RS00295-1;Parent=rna-RM588_RS00295;anticodon=(pos:39455..39457);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00295;product=tRNA-His
NZ_JAVRJR010000001.1	RefSeq	gene	39511	39582	.	+	.	ID=gene-RM588_RS00300;Name=RM588_RS00300;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00300;old_locus_tag=RM588_00300
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39511	39582	.	+	.	ID=rna-RM588_RS00300;Parent=gene-RM588_RS00300;anticodon=(pos:39543..39545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00300;product=tRNA-Gln
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39511	39582	.	+	.	ID=exon-RM588_RS00300-1;Parent=rna-RM588_RS00300;anticodon=(pos:39543..39545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00300;product=tRNA-Gln
NZ_JAVRJR010000001.1	RefSeq	gene	39591	39665	.	+	.	ID=gene-RM588_RS00305;Name=RM588_RS00305;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00305;old_locus_tag=RM588_00305
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39591	39665	.	+	.	ID=rna-RM588_RS00305;Parent=gene-RM588_RS00305;anticodon=(pos:39623..39625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00305;product=tRNA-Cys
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39591	39665	.	+	.	ID=exon-RM588_RS00305-1;Parent=rna-RM588_RS00305;anticodon=(pos:39623..39625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00305;product=tRNA-Cys
NZ_JAVRJR010000001.1	RefSeq	gene	39677	39751	.	+	.	ID=gene-RM588_RS00310;Name=RM588_RS00310;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00310;old_locus_tag=RM588_00310
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39677	39751	.	+	.	ID=rna-RM588_RS00310;Parent=gene-RM588_RS00310;anticodon=(pos:39710..39712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00310;product=tRNA-Gly
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39677	39751	.	+	.	ID=exon-RM588_RS00310-1;Parent=rna-RM588_RS00310;anticodon=(pos:39710..39712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00310;product=tRNA-Gly
NZ_JAVRJR010000001.1	RefSeq	gene	39777	39851	.	+	.	ID=gene-RM588_RS00315;Name=RM588_RS00315;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00315;old_locus_tag=RM588_00315
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39777	39851	.	+	.	ID=rna-RM588_RS00315;Parent=gene-RM588_RS00315;anticodon=(pos:39810..39812);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00315;product=tRNA-Gly
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39777	39851	.	+	.	ID=exon-RM588_RS00315-1;Parent=rna-RM588_RS00315;anticodon=(pos:39810..39812);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00315;product=tRNA-Gly
NZ_JAVRJR010000001.1	RefSeq	gene	39875	39949	.	+	.	ID=gene-RM588_RS00320;Name=RM588_RS00320;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00320;old_locus_tag=RM588_00320
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39875	39949	.	+	.	ID=rna-RM588_RS00320;Parent=gene-RM588_RS00320;anticodon=(pos:39908..39910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00320;product=tRNA-Gly
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39875	39949	.	+	.	ID=exon-RM588_RS00320-1;Parent=rna-RM588_RS00320;anticodon=(pos:39908..39910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00320;product=tRNA-Gly
NZ_JAVRJR010000001.1	RefSeq	gene	39987	40070	.	+	.	ID=gene-RM588_RS00325;Name=RM588_RS00325;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00325;old_locus_tag=RM588_00325
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	39987	40070	.	+	.	ID=rna-RM588_RS00325;Parent=gene-RM588_RS00325;anticodon=(pos:40021..40023);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00325;product=tRNA-Leu
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	39987	40070	.	+	.	ID=exon-RM588_RS00325-1;Parent=rna-RM588_RS00325;anticodon=(pos:40021..40023);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00325;product=tRNA-Leu
NZ_JAVRJR010000001.1	RefSeq	gene	40497	41000	.	+	.	ID=gene-RM588_RS00330;Name=RM588_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00330;old_locus_tag=RM588_00330
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	40497	41000	.	+	0	ID=cds-WP_103159615.1;Parent=gene-RM588_RS00330;Dbxref=GenBank:WP_103159615.1;Name=WP_103159615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS00330;product=hypothetical protein;protein_id=WP_103159615.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	41044	42102	.	+	.	ID=gene-RM588_RS00335;Name=RM588_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00335;old_locus_tag=RM588_00335
NZ_JAVRJR010000001.1	Protein Homology	CDS	41044	42102	.	+	0	ID=cds-WP_311548040.1;Parent=gene-RM588_RS00335;Dbxref=GenBank:WP_311548040.1;Name=WP_311548040.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449624.1;locus_tag=RM588_RS00335;product=PTS sugar transporter subunit IIC;protein_id=WP_311548040.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	42232	43689	.	+	.	ID=gene-RM588_RS00340;Name=RM588_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00340;old_locus_tag=RM588_00340
NZ_JAVRJR010000001.1	Protein Homology	CDS	42232	43689	.	+	0	ID=cds-WP_037577250.1;Parent=gene-RM588_RS00340;Dbxref=GenBank:WP_037577250.1;Name=WP_037577250.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471143.1;locus_tag=RM588_RS00340;product=ABC transporter substrate-binding protein/permease;protein_id=WP_037577250.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	43682	44404	.	+	.	ID=gene-RM588_RS00345;Name=RM588_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00345;old_locus_tag=RM588_00345
NZ_JAVRJR010000001.1	Protein Homology	CDS	43682	44404	.	+	0	ID=cds-WP_037577247.1;Parent=gene-RM588_RS00345;Dbxref=GenBank:WP_037577247.1;Name=WP_037577247.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638026.1;locus_tag=RM588_RS00345;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_037577247.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	44692	45825	.	+	.	ID=gene-RM588_RS00350;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=RM588_RS00350;old_locus_tag=RM588_00350
NZ_JAVRJR010000001.1	Protein Homology	CDS	44692	45825	.	+	0	ID=cds-WP_107364036.1;Parent=gene-RM588_RS00350;Dbxref=GenBank:WP_107364036.1;Name=WP_107364036.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364869.1;locus_tag=RM588_RS00350;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_107364036.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	45822	46292	.	+	.	ID=gene-RM588_RS00355;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=RM588_RS00355;old_locus_tag=RM588_00355
NZ_JAVRJR010000001.1	Protein Homology	CDS	45822	46292	.	+	0	ID=cds-WP_037577242.1;Parent=gene-RM588_RS00355;Dbxref=GenBank:WP_037577242.1;Name=WP_037577242.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613530.1;locus_tag=RM588_RS00355;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_037577242.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	46310	47479	.	+	.	ID=gene-RM588_RS00360;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM588_RS00360;old_locus_tag=RM588_00360
NZ_JAVRJR010000001.1	Protein Homology	CDS	46310	47479	.	+	0	ID=cds-WP_311548041.1;Parent=gene-RM588_RS00360;Dbxref=GenBank:WP_311548041.1;Name=WP_311548041.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468253.1;locus_tag=RM588_RS00360;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_311548041.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	47498	48097	.	+	.	ID=gene-RM588_RS00365;Name=RM588_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00365;old_locus_tag=RM588_00365
NZ_JAVRJR010000001.1	Protein Homology	CDS	47498	48097	.	+	0	ID=cds-WP_037577237.1;Parent=gene-RM588_RS00365;Dbxref=GenBank:WP_037577237.1;Name=WP_037577237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808097.1;locus_tag=RM588_RS00365;product=6-phosphogluconolactonase;protein_id=WP_037577237.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	48115	48279	.	+	.	ID=gene-RM588_RS00370;Name=RM588_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00370;old_locus_tag=RM588_00370
NZ_JAVRJR010000001.1	Protein Homology	CDS	48115	48279	.	+	0	ID=cds-WP_157946077.1;Parent=gene-RM588_RS00370;Dbxref=GenBank:WP_157946077.1;Name=WP_157946077.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164969.1;locus_tag=RM588_RS00370;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_157946077.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	48379	48789	.	+	.	ID=gene-RM588_RS00375;Name=RM588_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00375;old_locus_tag=RM588_00375
NZ_JAVRJR010000001.1	Protein Homology	CDS	48379	48789	.	+	0	ID=cds-WP_105963531.1;Parent=gene-RM588_RS00375;Dbxref=GenBank:WP_105963531.1;Name=WP_105963531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474495.1;locus_tag=RM588_RS00375;product=hypothetical protein;protein_id=WP_105963531.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	48934	50319	.	+	.	ID=gene-RM588_RS00380;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=RM588_RS00380;old_locus_tag=RM588_00380
NZ_JAVRJR010000001.1	Protein Homology	CDS	48934	50319	.	+	0	ID=cds-WP_037577233.1;Parent=gene-RM588_RS00380;Dbxref=GenBank:WP_037577233.1;Name=WP_037577233.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=RM588_RS00380;product=class II fumarate hydratase;protein_id=WP_037577233.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	50341	51867	.	+	.	ID=gene-RM588_RS00385;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=RM588_RS00385;old_locus_tag=RM588_00385
NZ_JAVRJR010000001.1	Protein Homology	CDS	50341	51867	.	+	0	ID=cds-WP_311548042.1;Parent=gene-RM588_RS00385;Dbxref=GenBank:WP_311548042.1;Name=WP_311548042.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302401.1;locus_tag=RM588_RS00385;product=exopolyphosphatase;protein_id=WP_311548042.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	51960	54122	.	+	.	ID=gene-RM588_RS00390;Name=RM588_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00390;old_locus_tag=RM588_00390
NZ_JAVRJR010000001.1	Protein Homology	CDS	51960	54122	.	+	0	ID=cds-WP_037577230.1;Parent=gene-RM588_RS00390;Dbxref=GenBank:WP_037577230.1;Name=WP_037577230.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384147.1;locus_tag=RM588_RS00390;product=RNA degradosome polyphosphate kinase;protein_id=WP_037577230.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	54161	54991	.	-	.	ID=gene-RM588_RS00395;Name=RM588_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00395;old_locus_tag=RM588_00395
NZ_JAVRJR010000001.1	Protein Homology	CDS	54161	54991	.	-	0	ID=cds-WP_037577228.1;Parent=gene-RM588_RS00395;Dbxref=GenBank:WP_037577228.1;Name=WP_037577228.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613537.1;locus_tag=RM588_RS00395;product=RluA family pseudouridine synthase;protein_id=WP_037577228.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	55205	56326	.	+	.	ID=gene-RM588_RS00400;Name=RM588_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00400;old_locus_tag=RM588_00400
NZ_JAVRJR010000001.1	Protein Homology	CDS	55205	56326	.	+	0	ID=cds-WP_037577226.1;Parent=gene-RM588_RS00400;Dbxref=GenBank:WP_037577226.1;Name=WP_037577226.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384143.1;locus_tag=RM588_RS00400;product=GAF domain-containing sensor histidine kinase;protein_id=WP_037577226.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	56327	56953	.	+	.	ID=gene-RM588_RS00405;Name=RM588_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00405;old_locus_tag=RM588_00405
NZ_JAVRJR010000001.1	Protein Homology	CDS	56327	56953	.	+	0	ID=cds-WP_037577223.1;Parent=gene-RM588_RS00405;Dbxref=GenBank:WP_037577223.1;Name=WP_037577223.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443556.1;locus_tag=RM588_RS00405;product=response regulator;protein_id=WP_037577223.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	57309	60398	.	+	.	ID=gene-RM588_RS00410;Name=RM588_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00410;old_locus_tag=RM588_00410
NZ_JAVRJR010000001.1	Protein Homology	CDS	57309	60398	.	+	0	ID=cds-WP_311541217.1;Parent=gene-RM588_RS00410;Dbxref=GenBank:WP_311541217.1;Name=WP_311541217.1;Ontology_term=GO:0007155,GO:0098630,GO:0001968,GO:0070051;gbkey=CDS;go_function=fibronectin binding|0001968||IEA,fibrinogen binding|0070051||IEA;go_process=cell adhesion|0007155||IEA,aggregation of unicellular organisms|0098630||IEA;inference=COORDINATES: protein motif:HMM:NF021909.8;locus_tag=RM588_RS00410;product=fibronectin-binding protein FnbA;protein_id=WP_311541217.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	60488	61363	.	-	.	ID=gene-RM588_RS00415;Name=RM588_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00415;old_locus_tag=RM588_00415
NZ_JAVRJR010000001.1	Protein Homology	CDS	60488	61363	.	-	0	ID=cds-WP_105986526.1;Parent=gene-RM588_RS00415;Dbxref=GenBank:WP_105986526.1;Name=WP_105986526.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425458.1;locus_tag=RM588_RS00415;product=cation diffusion facilitator family transporter;protein_id=WP_105986526.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	61642	64041	.	+	.	ID=gene-RM588_RS00420;Name=RM588_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00420;old_locus_tag=RM588_00420
NZ_JAVRJR010000001.1	Protein Homology	CDS	61642	64041	.	+	0	ID=cds-WP_311548043.1;Parent=gene-RM588_RS00420;Dbxref=GenBank:WP_311548043.1;Name=WP_311548043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037690.7;locus_tag=RM588_RS00420;product=Ig-like domain-containing protein;protein_id=WP_311548043.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	64254	65540	.	+	.	ID=gene-RM588_RS00425;Name=RM588_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00425;old_locus_tag=RM588_00425
NZ_JAVRJR010000001.1	Protein Homology	CDS	64254	65540	.	+	0	ID=cds-WP_233654851.1;Parent=gene-RM588_RS00425;Dbxref=GenBank:WP_233654851.1;Name=WP_233654851.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425457.1;locus_tag=RM588_RS00425;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_233654851.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	65629	66024	.	-	.	ID=gene-RM588_RS00430;Name=RM588_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00430;old_locus_tag=RM588_00430
NZ_JAVRJR010000001.1	Protein Homology	CDS	65629	66024	.	-	0	ID=cds-WP_233654852.1;Parent=gene-RM588_RS00430;Dbxref=GenBank:WP_233654852.1;Name=WP_233654852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614928.1;locus_tag=RM588_RS00430;product=hypothetical protein;protein_id=WP_233654852.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	66315	66620	.	+	.	ID=gene-RM588_RS00435;Name=RM588_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00435;old_locus_tag=RM588_00435
NZ_JAVRJR010000001.1	Protein Homology	CDS	66315	66620	.	+	0	ID=cds-WP_105963607.1;Parent=gene-RM588_RS00435;Dbxref=GenBank:WP_105963607.1;Name=WP_105963607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014980.7;locus_tag=RM588_RS00435;product=fibronectin binding protein;protein_id=WP_105963607.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	66565	66885	.	+	.	ID=gene-RM588_RS00440;Name=RM588_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00440;old_locus_tag=RM588_00440
NZ_JAVRJR010000001.1	Protein Homology	CDS	66565	66885	.	+	0	ID=cds-WP_103159565.1;Parent=gene-RM588_RS00440;Dbxref=GenBank:WP_103159565.1;Name=WP_103159565.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.7;locus_tag=RM588_RS00440;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_103159565.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	67570	67782	.	+	.	ID=gene-RM588_RS00445;Name=RM588_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00445;old_locus_tag=RM588_00445
NZ_JAVRJR010000001.1	Protein Homology	CDS	67570	67782	.	+	0	ID=cds-WP_037574590.1;Parent=gene-RM588_RS00445;Dbxref=GenBank:WP_037574590.1;Name=WP_037574590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039319.5;locus_tag=RM588_RS00445;product=DUF6007 family protein;protein_id=WP_037574590.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	67906	68151	.	-	.	ID=gene-RM588_RS00450;Name=RM588_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00450;old_locus_tag=RM588_00450
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	67906	68151	.	-	0	ID=cds-WP_103159566.1;Parent=gene-RM588_RS00450;Dbxref=GenBank:WP_103159566.1;Name=WP_103159566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS00450;product=hypothetical protein;protein_id=WP_103159566.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	68541	69005	.	+	.	ID=gene-RM588_RS00455;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=RM588_RS00455;old_locus_tag=RM588_00455
NZ_JAVRJR010000001.1	Protein Homology	CDS	68541	69005	.	+	0	ID=cds-WP_037574584.1;Parent=gene-RM588_RS00455;Dbxref=GenBank:WP_037574584.1;Name=WP_037574584.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613542.1;locus_tag=RM588_RS00455;product=XRE family transcriptional regulator XdrA;protein_id=WP_037574584.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	69162	70292	.	+	.	ID=gene-RM588_RS00460;Name=RM588_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00460;old_locus_tag=RM588_00460
NZ_JAVRJR010000001.1	Protein Homology	CDS	69162	70292	.	+	0	ID=cds-WP_233654853.1;Parent=gene-RM588_RS00460;Dbxref=GenBank:WP_233654853.1;Name=WP_233654853.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275417.1;locus_tag=RM588_RS00460;product=DUF445 domain-containing protein;protein_id=WP_233654853.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	70379	70723	.	+	.	ID=gene-RM588_RS00465;Name=RM588_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00465;old_locus_tag=RM588_00465
NZ_JAVRJR010000001.1	Protein Homology	CDS	70379	70723	.	+	0	ID=cds-WP_105963604.1;Parent=gene-RM588_RS00465;Dbxref=GenBank:WP_105963604.1;Name=WP_105963604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=RM588_RS00465;product=YlbF/YmcA family competence regulator;protein_id=WP_105963604.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	70945	72132	.	+	.	ID=gene-RM588_RS00470;Name=RM588_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00470;old_locus_tag=RM588_00470
NZ_JAVRJR010000001.1	Protein Homology	CDS	70945	72132	.	+	0	ID=cds-WP_107372176.1;Parent=gene-RM588_RS00470;Dbxref=GenBank:WP_107372176.1;Name=WP_107372176.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164983.1;locus_tag=RM588_RS00470;product=metallophosphoesterase family protein;protein_id=WP_107372176.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	72136	75063	.	+	.	ID=gene-RM588_RS00475;Name=RM588_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00475;old_locus_tag=RM588_00475
NZ_JAVRJR010000001.1	Protein Homology	CDS	72136	75063	.	+	0	ID=cds-WP_311541219.1;Parent=gene-RM588_RS00475;Dbxref=GenBank:WP_311541219.1;Name=WP_311541219.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164984.1;locus_tag=RM588_RS00475;product=AAA family ATPase;protein_id=WP_311541219.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	75082	76023	.	+	.	ID=gene-RM588_RS00480;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=RM588_RS00480;old_locus_tag=RM588_00480
NZ_JAVRJR010000001.1	Protein Homology	CDS	75082	76023	.	+	0	ID=cds-WP_037574571.1;Parent=gene-RM588_RS00480;Dbxref=GenBank:WP_037574571.1;Name=WP_037574571.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=RM588_RS00480;product=3'-5' exoribonuclease YhaM;protein_id=WP_037574571.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	76338	77312	.	-	.	ID=gene-RM588_RS00485;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=RM588_RS00485;old_locus_tag=RM588_00485
NZ_JAVRJR010000001.1	Protein Homology	CDS	76338	77312	.	-	0	ID=cds-WP_037574569.1;Parent=gene-RM588_RS00485;Dbxref=GenBank:WP_037574569.1;Name=WP_037574569.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425447.1;locus_tag=RM588_RS00485;product=peptidylprolyl isomerase PrsA;protein_id=WP_037574569.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	77522	78061	.	-	.	ID=gene-RM588_RS00490;Name=RM588_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00490;old_locus_tag=RM588_00490
NZ_JAVRJR010000001.1	Protein Homology	CDS	77522	78061	.	-	0	ID=cds-WP_107360775.1;Parent=gene-RM588_RS00490;Dbxref=GenBank:WP_107360775.1;Name=WP_107360775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452113.1;locus_tag=RM588_RS00490;product=DUF3267 domain-containing protein;protein_id=WP_107360775.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	78114	78644	.	-	.	ID=gene-RM588_RS00495;Name=RM588_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00495;old_locus_tag=RM588_00495
NZ_JAVRJR010000001.1	Protein Homology	CDS	78114	78644	.	-	0	ID=cds-WP_037574563.1;Parent=gene-RM588_RS00495;Dbxref=GenBank:WP_037574563.1;Name=WP_037574563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613551.1;locus_tag=RM588_RS00495;product=HTH-type transcriptional regulator Hpr;protein_id=WP_037574563.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	78744	79100	.	-	.	ID=gene-RM588_RS00500;Name=RM588_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00500;old_locus_tag=RM588_00500
NZ_JAVRJR010000001.1	Protein Homology	CDS	78744	79100	.	-	0	ID=cds-WP_037574561.1;Parent=gene-RM588_RS00500;Dbxref=GenBank:WP_037574561.1;Name=WP_037574561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168021.1;locus_tag=RM588_RS00500;product=YtxH domain-containing protein;protein_id=WP_037574561.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	79185	79610	.	-	.	ID=gene-RM588_RS00505;Name=RM588_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00505;old_locus_tag=RM588_00505
NZ_JAVRJR010000001.1	Protein Homology	CDS	79185	79610	.	-	0	ID=cds-WP_037574559.1;Parent=gene-RM588_RS00505;Dbxref=GenBank:WP_037574559.1;Name=WP_037574559.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613553.1;locus_tag=RM588_RS00505;product=HIT family protein;protein_id=WP_037574559.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	79739	80476	.	+	.	ID=gene-RM588_RS00510;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=RM588_RS00510;old_locus_tag=RM588_00510
NZ_JAVRJR010000001.1	Protein Homology	CDS	79739	80476	.	+	0	ID=cds-WP_311539203.1;Parent=gene-RM588_RS00510;Dbxref=GenBank:WP_311539203.1;Name=WP_311539203.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507255.1;locus_tag=RM588_RS00510;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_311539203.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	80473	81687	.	+	.	ID=gene-RM588_RS00515;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=RM588_RS00515;old_locus_tag=RM588_00515
NZ_JAVRJR010000001.1	Protein Homology	CDS	80473	81687	.	+	0	ID=cds-WP_107360776.1;Parent=gene-RM588_RS00515;Dbxref=GenBank:WP_107360776.1;Name=WP_107360776.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168024.1;locus_tag=RM588_RS00515;product=ABC transporter permease EcsB;protein_id=WP_107360776.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	81967	82503	.	-	.	ID=gene-RM588_RS00520;Name=RM588_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00520;old_locus_tag=RM588_00520
NZ_JAVRJR010000001.1	Protein Homology	CDS	81967	82503	.	-	0	ID=cds-WP_107360817.1;Parent=gene-RM588_RS00520;Dbxref=GenBank:WP_107360817.1;Name=WP_107360817.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425440.1;locus_tag=RM588_RS00520;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_107360817.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	82700	83743	.	+	.	ID=gene-RM588_RS00525;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=RM588_RS00525;old_locus_tag=RM588_00525
NZ_JAVRJR010000001.1	Protein Homology	CDS	82700	83743	.	+	0	ID=cds-WP_107360818.1;Parent=gene-RM588_RS00525;Dbxref=GenBank:WP_107360818.1;Name=WP_107360818.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164994.1;locus_tag=RM588_RS00525;product=uroporphyrinogen decarboxylase;protein_id=WP_107360818.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	83765	84697	.	+	.	ID=gene-RM588_RS00530;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=RM588_RS00530;old_locus_tag=RM588_00530
NZ_JAVRJR010000001.1	Protein Homology	CDS	83765	84697	.	+	0	ID=cds-WP_037574547.1;Parent=gene-RM588_RS00530;Dbxref=GenBank:WP_037574547.1;Name=WP_037574547.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168027.1;locus_tag=RM588_RS00530;product=ferrochelatase;protein_id=WP_037574547.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	84703	86100	.	+	.	ID=gene-RM588_RS00535;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=RM588_RS00535;old_locus_tag=RM588_00535
NZ_JAVRJR010000001.1	Protein Homology	CDS	84703	86100	.	+	0	ID=cds-WP_037574545.1;Parent=gene-RM588_RS00535;Dbxref=GenBank:WP_037574545.1;Name=WP_037574545.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=protoporphyrinogen oxidase activity%2C oxygen as acceptor|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=RM588_RS00535;product=protoporphyrinogen oxidase;protein_id=WP_037574545.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	86425	86979	.	+	.	ID=gene-RM588_RS00540;Name=RM588_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00540;old_locus_tag=RM588_00540
NZ_JAVRJR010000001.1	Protein Homology	CDS	86425	86979	.	+	0	ID=cds-WP_037574544.1;Parent=gene-RM588_RS00540;Dbxref=GenBank:WP_037574544.1;Name=WP_037574544.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168029.1;locus_tag=RM588_RS00540;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_037574544.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	87147	87221	.	+	.	ID=gene-RM588_RS00545;Name=RM588_RS00545;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00545;old_locus_tag=RM588_00545
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87147	87221	.	+	.	ID=rna-RM588_RS00545;Parent=gene-RM588_RS00545;anticodon=(pos:87180..87182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00545;product=tRNA-Glu
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87147	87221	.	+	.	ID=exon-RM588_RS00545-1;Parent=rna-RM588_RS00545;anticodon=(pos:87180..87182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00545;product=tRNA-Glu
NZ_JAVRJR010000001.1	RefSeq	gene	87319	87392	.	+	.	ID=gene-RM588_RS00550;Name=RM588_RS00550;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00550;old_locus_tag=RM588_00550
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87319	87392	.	+	.	ID=rna-RM588_RS00550;Parent=gene-RM588_RS00550;anticodon=(pos:87353..87355);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00550;product=tRNA-Met
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87319	87392	.	+	.	ID=exon-RM588_RS00550-1;Parent=rna-RM588_RS00550;anticodon=(pos:87353..87355);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00550;product=tRNA-Met
NZ_JAVRJR010000001.1	RefSeq	gene	87404	87480	.	+	.	ID=gene-RM588_RS00555;Name=RM588_RS00555;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00555;old_locus_tag=RM588_00555
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87404	87480	.	+	.	ID=rna-RM588_RS00555;Parent=gene-RM588_RS00555;anticodon=(pos:87438..87440);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00555;product=tRNA-Asp
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87404	87480	.	+	.	ID=exon-RM588_RS00555-1;Parent=rna-RM588_RS00555;anticodon=(pos:87438..87440);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00555;product=tRNA-Asp
NZ_JAVRJR010000001.1	RefSeq	gene	87491	87563	.	+	.	ID=gene-RM588_RS00560;Name=RM588_RS00560;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00560;old_locus_tag=RM588_00560
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87491	87563	.	+	.	ID=rna-RM588_RS00560;Parent=gene-RM588_RS00560;anticodon=(pos:87524..87526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00560;product=tRNA-Phe
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87491	87563	.	+	.	ID=exon-RM588_RS00560-1;Parent=rna-RM588_RS00560;anticodon=(pos:87524..87526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00560;product=tRNA-Phe
NZ_JAVRJR010000001.1	RefSeq	gene	87576	87648	.	+	.	ID=gene-RM588_RS00565;Name=RM588_RS00565;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00565;old_locus_tag=RM588_00565
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87576	87648	.	+	.	ID=rna-RM588_RS00565;Parent=gene-RM588_RS00565;anticodon=(pos:87609..87611);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00565;product=tRNA-His
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87576	87648	.	+	.	ID=exon-RM588_RS00565-1;Parent=rna-RM588_RS00565;anticodon=(pos:87609..87611);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00565;product=tRNA-His
NZ_JAVRJR010000001.1	RefSeq	gene	87662	87735	.	+	.	ID=gene-RM588_RS00570;Name=RM588_RS00570;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00570;old_locus_tag=RM588_00570
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87662	87735	.	+	.	ID=rna-RM588_RS00570;Parent=gene-RM588_RS00570;anticodon=(pos:87694..87696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00570;product=tRNA-Gly
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87662	87735	.	+	.	ID=exon-RM588_RS00570-1;Parent=rna-RM588_RS00570;anticodon=(pos:87694..87696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00570;product=tRNA-Gly
NZ_JAVRJR010000001.1	RefSeq	gene	87745	87819	.	+	.	ID=gene-RM588_RS00575;Name=RM588_RS00575;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00575;old_locus_tag=RM588_00575
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87745	87819	.	+	.	ID=rna-RM588_RS00575;Parent=gene-RM588_RS00575;anticodon=(pos:87777..87779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00575;product=tRNA-Asn
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87745	87819	.	+	.	ID=exon-RM588_RS00575-1;Parent=rna-RM588_RS00575;anticodon=(pos:87777..87779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00575;product=tRNA-Asn
NZ_JAVRJR010000001.1	RefSeq	gene	87821	87892	.	+	.	ID=gene-RM588_RS00580;Name=RM588_RS00580;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00580;old_locus_tag=RM588_00580
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87821	87892	.	+	.	ID=rna-RM588_RS00580;Parent=gene-RM588_RS00580;anticodon=(pos:87854..87856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00580;product=tRNA-Glu
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87821	87892	.	+	.	ID=exon-RM588_RS00580-1;Parent=rna-RM588_RS00580;anticodon=(pos:87854..87856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00580;product=tRNA-Glu
NZ_JAVRJR010000001.1	RefSeq	gene	87941	88029	.	+	.	ID=gene-RM588_RS00585;Name=RM588_RS00585;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS00585;old_locus_tag=RM588_00585
NZ_JAVRJR010000001.1	tRNAscan-SE	tRNA	87941	88029	.	+	.	ID=rna-RM588_RS00585;Parent=gene-RM588_RS00585;anticodon=(pos:87976..87978);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00585;product=tRNA-Ser
NZ_JAVRJR010000001.1	tRNAscan-SE	exon	87941	88029	.	+	.	ID=exon-RM588_RS00585-1;Parent=rna-RM588_RS00585;anticodon=(pos:87976..87978);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS00585;product=tRNA-Ser
NZ_JAVRJR010000001.1	RefSeq	gene	88363	88578	.	+	.	ID=gene-RM588_RS00590;Name=RM588_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00590;old_locus_tag=RM588_00590
NZ_JAVRJR010000001.1	Protein Homology	CDS	88363	88578	.	+	0	ID=cds-WP_107360819.1;Parent=gene-RM588_RS00590;Dbxref=GenBank:WP_107360819.1;Name=WP_107360819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.2;locus_tag=RM588_RS00590;product=hypothetical protein;protein_id=WP_107360819.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	88705	88866	.	+	.	ID=gene-RM588_RS00595;Name=RM588_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00595;old_locus_tag=RM588_00595
NZ_JAVRJR010000001.1	Protein Homology	CDS	88705	88866	.	+	0	ID=cds-WP_169301470.1;Parent=gene-RM588_RS00595;Dbxref=GenBank:WP_169301470.1;Name=WP_169301470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167674.1;locus_tag=RM588_RS00595;product=hypothetical protein;protein_id=WP_169301470.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	89174	89527	.	+	.	ID=gene-RM588_RS00600;Name=RM588_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00600;old_locus_tag=RM588_00600
NZ_JAVRJR010000001.1	Protein Homology	CDS	89174	89527	.	+	0	ID=cds-WP_311548044.1;Parent=gene-RM588_RS00600;Dbxref=GenBank:WP_311548044.1;Name=WP_311548044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF056917.1;locus_tag=RM588_RS00600;product=YqxI family protein;protein_id=WP_311548044.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	89626	89991	.	+	.	ID=gene-RM588_RS00605;Name=RM588_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00605;old_locus_tag=RM588_00605
NZ_JAVRJR010000001.1	Protein Homology	CDS	89626	89991	.	+	0	ID=cds-WP_105965358.1;Parent=gene-RM588_RS00605;Dbxref=GenBank:WP_105965358.1;Name=WP_105965358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501230.1;locus_tag=RM588_RS00605;product=hypothetical protein;protein_id=WP_105965358.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	93045	93764	.	+	.	ID=gene-RM588_RS00610;Name=RM588_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00610;old_locus_tag=RM588_00610
NZ_JAVRJR010000001.1	Protein Homology	CDS	93045	93764	.	+	0	ID=cds-WP_198644536.1;Parent=gene-RM588_RS00610;Dbxref=GenBank:WP_198644536.1;Name=WP_198644536.1;Ontology_term=GO:0008233,GO:0070007;gbkey=CDS;go_function=peptidase activity|0008233||IEA,glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF024760.7;locus_tag=RM588_RS00610;product=PrsW family glutamic-type intramembrane protease;protein_id=WP_198644536.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	94277	95023	.	-	.	ID=gene-RM588_RS00615;Name=RM588_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00615;old_locus_tag=RM588_00615
NZ_JAVRJR010000001.1	Protein Homology	CDS	94277	95023	.	-	0	ID=cds-WP_105965360.1;Parent=gene-RM588_RS00615;Dbxref=GenBank:WP_105965360.1;Name=WP_105965360.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006677782.1;locus_tag=RM588_RS00615;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_105965360.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	95344	95889	.	+	.	ID=gene-RM588_RS00620;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=RM588_RS00620;old_locus_tag=RM588_00620
NZ_JAVRJR010000001.1	Protein Homology	CDS	95344	95889	.	+	0	ID=cds-WP_037574533.1;Parent=gene-RM588_RS00620;Dbxref=GenBank:WP_037574533.1;Name=WP_037574533.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432799.1;locus_tag=RM588_RS00620;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_037574533.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	95910	96152	.	+	.	ID=gene-RM588_RS00625;Name=RM588_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00625;old_locus_tag=RM588_00625
NZ_JAVRJR010000001.1	Protein Homology	CDS	95910	96152	.	+	0	ID=cds-WP_037574531.1;Parent=gene-RM588_RS00625;Dbxref=GenBank:WP_037574531.1;Name=WP_037574531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432747.1;locus_tag=RM588_RS00625;product=DUF2273 domain-containing protein;protein_id=WP_037574531.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	96200	96694	.	+	.	ID=gene-RM588_RS00630;Name=RM588_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00630;old_locus_tag=RM588_00630
NZ_JAVRJR010000001.1	Protein Homology	CDS	96200	96694	.	+	0	ID=cds-WP_037574529.1;Parent=gene-RM588_RS00630;Dbxref=GenBank:WP_037574529.1;Name=WP_037574529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=RM588_RS00630;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037574529.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	96950	98359	.	+	.	ID=gene-RM588_RS00635;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=RM588_RS00635;old_locus_tag=RM588_00635
NZ_JAVRJR010000001.1	Protein Homology	CDS	96950	98359	.	+	0	ID=cds-WP_037574527.1;Parent=gene-RM588_RS00635;Dbxref=GenBank:WP_037574527.1;Name=WP_037574527.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464482.1;locus_tag=RM588_RS00635;product=o-succinylbenzoate--CoA ligase;protein_id=WP_037574527.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	98356	99345	.	+	.	ID=gene-RM588_RS00640;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=RM588_RS00640;old_locus_tag=RM588_00640
NZ_JAVRJR010000001.1	Protein Homology	CDS	98356	99345	.	+	0	ID=cds-WP_107362170.1;Parent=gene-RM588_RS00640;Dbxref=GenBank:WP_107362170.1;Name=WP_107362170.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729349.1;locus_tag=RM588_RS00640;product=o-succinylbenzoate synthase;protein_id=WP_107362170.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	99342	99572	.	-	.	ID=gene-RM588_RS00645;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=RM588_RS00645;old_locus_tag=RM588_00645
NZ_JAVRJR010000001.1	Protein Homology	CDS	99342	99572	.	-	0	ID=cds-WP_037574520.1;Parent=gene-RM588_RS00645;Dbxref=GenBank:WP_037574520.1;Name=WP_037574520.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613580.1;locus_tag=RM588_RS00645;product=membrane protein insertion efficiency factor YidD;protein_id=WP_037574520.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	99635	100099	.	+	.	ID=gene-RM588_RS00650;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=RM588_RS00650;old_locus_tag=RM588_00650
NZ_JAVRJR010000001.1	Protein Homology	CDS	99635	100099	.	+	0	ID=cds-WP_037574517.1;Parent=gene-RM588_RS00650;Dbxref=GenBank:WP_037574517.1;Name=WP_037574517.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613581.1;locus_tag=RM588_RS00650;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_037574517.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	100086	100871	.	+	.	ID=gene-RM588_RS00655;Name=RM588_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00655;old_locus_tag=RM588_00655
NZ_JAVRJR010000001.1	Protein Homology	CDS	100086	100871	.	+	0	ID=cds-WP_172458435.1;Parent=gene-RM588_RS00655;Dbxref=GenBank:WP_172458435.1;Name=WP_172458435.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452127.1;locus_tag=RM588_RS00655;product=alpha/beta hydrolase family protein;protein_id=WP_172458435.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	100907	102487	.	-	.	ID=gene-RM588_RS00660;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=RM588_RS00660;old_locus_tag=RM588_00660
NZ_JAVRJR010000001.1	Protein Homology	CDS	100907	102487	.	-	0	ID=cds-WP_037574513.1;Parent=gene-RM588_RS00660;Dbxref=GenBank:WP_037574513.1;Name=WP_037574513.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165945.1;locus_tag=RM588_RS00660;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_037574513.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	riboswitch	102701	102811	.	+	.	ID=id-NZ_JAVRJR010000001.1:102701..102811;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000001.1	RefSeq	gene	102920	104119	.	+	.	ID=gene-RM588_RS00665;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=RM588_RS00665;old_locus_tag=RM588_00665
NZ_JAVRJR010000001.1	Protein Homology	CDS	102920	104119	.	+	0	ID=cds-WP_037574511.1;Parent=gene-RM588_RS00665;Dbxref=GenBank:WP_037574511.1;Name=WP_037574511.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219664.1;locus_tag=RM588_RS00665;product=methionine adenosyltransferase;protein_id=WP_037574511.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	104209	105117	.	+	.	ID=gene-RM588_RS00670;Name=RM588_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00670;old_locus_tag=RM588_00670
NZ_JAVRJR010000001.1	Protein Homology	CDS	104209	105117	.	+	0	ID=cds-WP_037574509.1;Parent=gene-RM588_RS00670;Dbxref=GenBank:WP_037574509.1;Name=WP_037574509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452130.1;locus_tag=RM588_RS00670;product=NERD domain-containing protein;protein_id=WP_037574509.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	105367	106203	.	+	.	ID=gene-RM588_RS00675;Name=RM588_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00675;old_locus_tag=RM588_00675
NZ_JAVRJR010000001.1	Protein Homology	CDS	105367	106203	.	+	0	ID=cds-WP_103158792.1;Parent=gene-RM588_RS00675;Dbxref=GenBank:WP_103158792.1;Name=WP_103158792.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613586.1;locus_tag=RM588_RS00675;product=aldo/keto reductase;protein_id=WP_103158792.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	106335	106709	.	-	.	ID=gene-RM588_RS00680;Name=RM588_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00680;old_locus_tag=RM588_00680
NZ_JAVRJR010000001.1	Protein Homology	CDS	106335	106709	.	-	0	ID=cds-WP_037574506.1;Parent=gene-RM588_RS00680;Dbxref=GenBank:WP_037574506.1;Name=WP_037574506.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014584.7;locus_tag=RM588_RS00680;product=fluoride efflux transporter FluC;protein_id=WP_037574506.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	106706	107071	.	-	.	ID=gene-RM588_RS00685;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=RM588_RS00685;old_locus_tag=RM588_00685
NZ_JAVRJR010000001.1	Protein Homology	CDS	106706	107071	.	-	0	ID=cds-WP_105965361.1;Parent=gene-RM588_RS00685;Dbxref=GenBank:WP_105965361.1;Name=WP_105965361.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507277.1;locus_tag=RM588_RS00685;product=fluoride efflux transporter CrcB;protein_id=WP_105965361.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	107089	107391	.	-	.	ID=gene-RM588_RS00690;Name=RM588_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00690;old_locus_tag=RM588_00690
NZ_JAVRJR010000001.1	Protein Homology	CDS	107089	107391	.	-	0	ID=cds-WP_037574501.1;Parent=gene-RM588_RS00690;Dbxref=GenBank:WP_037574501.1;Name=WP_037574501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219659.1;locus_tag=RM588_RS00690;product=hypothetical protein;protein_id=WP_037574501.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	107541	108251	.	+	.	ID=gene-RM588_RS00695;Name=RM588_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00695;old_locus_tag=RM588_00695
NZ_JAVRJR010000001.1	Protein Homology	CDS	107541	108251	.	+	0	ID=cds-WP_037574499.1;Parent=gene-RM588_RS00695;Dbxref=GenBank:WP_037574499.1;Name=WP_037574499.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=RM588_RS00695;product=transaldolase;protein_id=WP_037574499.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	108352	108804	.	+	.	ID=gene-RM588_RS00700;Name=RM588_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00700;old_locus_tag=RM588_00700
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	108352	108804	.	+	0	ID=cds-WP_037574497.1;Parent=gene-RM588_RS00700;Dbxref=GenBank:WP_037574497.1;Name=WP_037574497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS00700;product=hypothetical protein;protein_id=WP_037574497.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	108784	109212	.	-	.	ID=gene-RM588_RS00705;Name=RM588_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00705;old_locus_tag=RM588_00705
NZ_JAVRJR010000001.1	Protein Homology	CDS	108784	109212	.	-	0	ID=cds-WP_037574495.1;Parent=gene-RM588_RS00705;Dbxref=GenBank:WP_037574495.1;Name=WP_037574495.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF018087.7;locus_tag=RM588_RS00705;product=competence protein ComK;protein_id=WP_037574495.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	109230	109697	.	-	.	ID=gene-RM588_RS00710;Name=RM588_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00710;old_locus_tag=RM588_00710
NZ_JAVRJR010000001.1	Protein Homology	CDS	109230	109697	.	-	0	ID=cds-WP_311548045.1;Parent=gene-RM588_RS00710;Dbxref=GenBank:WP_311548045.1;Name=WP_311548045.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=RM588_RS00710;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_311548045.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	109893	110117	.	+	.	ID=gene-RM588_RS00715;Name=RM588_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00715;old_locus_tag=RM588_00715
NZ_JAVRJR010000001.1	Protein Homology	CDS	109893	110117	.	+	0	ID=cds-WP_037574491.1;Parent=gene-RM588_RS00715;Dbxref=GenBank:WP_037574491.1;Name=WP_037574491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468074.1;locus_tag=RM588_RS00715;product=hypothetical protein;protein_id=WP_037574491.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	110280	111146	.	+	.	ID=gene-RM588_RS00720;Name=sagB;gbkey=Gene;gene=sagB;gene_biotype=protein_coding;locus_tag=RM588_RS00720;old_locus_tag=RM588_00720
NZ_JAVRJR010000001.1	Protein Homology	CDS	110280	111146	.	+	0	ID=cds-WP_037574490.1;Parent=gene-RM588_RS00720;Dbxref=GenBank:WP_037574490.1;Name=WP_037574490.1;gbkey=CDS;gene=sagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613595.1;locus_tag=RM588_RS00720;product=peptidoglycan release complex glucosaminidase SagB;protein_id=WP_037574490.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	111678	113321	.	+	.	ID=gene-RM588_RS00725;Name=RM588_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00725;old_locus_tag=RM588_00725
NZ_JAVRJR010000001.1	Protein Homology	CDS	111678	113321	.	+	0	ID=cds-WP_233654859.1;Parent=gene-RM588_RS00725;Dbxref=GenBank:WP_233654859.1;Name=WP_233654859.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381997.1;locus_tag=RM588_RS00725;product=FAD/NAD(P)-binding protein;protein_id=WP_233654859.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	riboswitch	113436	113565	.	+	.	ID=id-NZ_JAVRJR010000001.1:113436..113565;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000001.1	RefSeq	gene	113711	114757	.	+	.	ID=gene-RM588_RS00730;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=RM588_RS00730;old_locus_tag=RM588_00730
NZ_JAVRJR010000001.1	Protein Homology	CDS	113711	114757	.	+	0	ID=cds-WP_107366670.1;Parent=gene-RM588_RS00730;Dbxref=GenBank:WP_107366670.1;Name=WP_107366670.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165958.1;locus_tag=RM588_RS00730;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_107366670.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	114762	115391	.	+	.	ID=gene-RM588_RS00735;Name=RM588_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00735;old_locus_tag=RM588_00735
NZ_JAVRJR010000001.1	Protein Homology	CDS	114762	115391	.	+	0	ID=cds-WP_037574483.1;Parent=gene-RM588_RS00735;Dbxref=GenBank:WP_037574483.1;Name=WP_037574483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165959.1;locus_tag=RM588_RS00735;product=riboflavin synthase;protein_id=WP_037574483.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	115405	116586	.	+	.	ID=gene-RM588_RS00740;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=RM588_RS00740;old_locus_tag=RM588_00740
NZ_JAVRJR010000001.1	Protein Homology	CDS	115405	116586	.	+	0	ID=cds-WP_105965366.1;Parent=gene-RM588_RS00740;Dbxref=GenBank:WP_105965366.1;Name=WP_105965366.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490166.1;locus_tag=RM588_RS00740;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_105965366.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	116604	117062	.	+	.	ID=gene-RM588_RS00745;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=RM588_RS00745;old_locus_tag=RM588_00745
NZ_JAVRJR010000001.1	Protein Homology	CDS	116604	117062	.	+	0	ID=cds-WP_233654860.1;Parent=gene-RM588_RS00745;Dbxref=GenBank:WP_233654860.1;Name=WP_233654860.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425392.1;locus_tag=RM588_RS00745;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_233654860.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	117272	118318	.	-	.	ID=gene-RM588_RS00750;Name=RM588_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00750;old_locus_tag=RM588_00750
NZ_JAVRJR010000001.1	Protein Homology	CDS	117272	118318	.	-	0	ID=cds-WP_084276030.1;Parent=gene-RM588_RS00750;Dbxref=GenBank:WP_084276030.1;Name=WP_084276030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166088.1;locus_tag=RM588_RS00750;product=proline dehydrogenase family protein;protein_id=WP_084276030.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	118497	118631	.	-	.	ID=gene-RM588_RS00755;Name=RM588_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00755;old_locus_tag=RM588_00755
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	118497	118631	.	-	0	ID=cds-WP_255201402.1;Parent=gene-RM588_RS00755;Dbxref=GenBank:WP_255201402.1;Name=WP_255201402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS00755;product=hypothetical protein;protein_id=WP_255201402.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	118846	119178	.	+	.	ID=gene-RM588_RS00760;Name=RM588_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00760;old_locus_tag=RM588_00760
NZ_JAVRJR010000001.1	Protein Homology	CDS	118846	119178	.	+	0	ID=cds-WP_037574475.1;Parent=gene-RM588_RS00760;Dbxref=GenBank:WP_037574475.1;Name=WP_037574475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425389.1;locus_tag=RM588_RS00760;product=hypothetical protein;protein_id=WP_037574475.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	119376	120197	.	+	.	ID=gene-RM588_RS00765;Name=RM588_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00765;old_locus_tag=RM588_00765
NZ_JAVRJR010000001.1	Protein Homology	CDS	119376	120197	.	+	0	ID=cds-WP_037574472.1;Parent=gene-RM588_RS00765;Dbxref=GenBank:WP_037574472.1;Name=WP_037574472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613604.1;locus_tag=RM588_RS00765;product=alpha/beta fold hydrolase;protein_id=WP_037574472.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	120318	121274	.	+	.	ID=gene-RM588_RS00770;Name=RM588_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00770;old_locus_tag=RM588_00770
NZ_JAVRJR010000001.1	Protein Homology	CDS	120318	121274	.	+	0	ID=cds-WP_107360804.1;Parent=gene-RM588_RS00770;Dbxref=GenBank:WP_107360804.1;Name=WP_107360804.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425387.1;locus_tag=RM588_RS00770;product=L-lactate dehydrogenase;protein_id=WP_107360804.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	121419	121829	.	+	.	ID=gene-RM588_RS00775;Name=RM588_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00775;old_locus_tag=RM588_00775
NZ_JAVRJR010000001.1	Protein Homology	CDS	121419	121829	.	+	0	ID=cds-WP_037574466.1;Parent=gene-RM588_RS00775;Dbxref=GenBank:WP_037574466.1;Name=WP_037574466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381988.1;locus_tag=RM588_RS00775;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037574466.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	121947	122519	.	-	.	ID=gene-RM588_RS00780;Name=mnmM;gbkey=Gene;gene=mnmM;gene_biotype=protein_coding;locus_tag=RM588_RS00780;old_locus_tag=RM588_00780
NZ_JAVRJR010000001.1	Protein Homology	CDS	121947	122519	.	-	0	ID=cds-WP_037574463.1;Parent=gene-RM588_RS00780;Dbxref=GenBank:WP_037574463.1;Name=WP_037574463.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmM;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613607.1;locus_tag=RM588_RS00780;product=tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM;protein_id=WP_037574463.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	122516	123475	.	-	.	ID=gene-RM588_RS00785;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=RM588_RS00785;old_locus_tag=RM588_00785
NZ_JAVRJR010000001.1	Protein Homology	CDS	122516	123475	.	-	0	ID=cds-WP_037574460.1;Parent=gene-RM588_RS00785;Dbxref=GenBank:WP_037574460.1;Name=WP_037574460.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443468.1;locus_tag=RM588_RS00785;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_037574460.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	123587	124768	.	+	.	ID=gene-RM588_RS00790;Name=RM588_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00790;old_locus_tag=RM588_00790
NZ_JAVRJR010000001.1	Protein Homology	CDS	123587	124768	.	+	0	ID=cds-WP_037574457.1;Parent=gene-RM588_RS00790;Dbxref=GenBank:WP_037574457.1;Name=WP_037574457.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425383.1;locus_tag=RM588_RS00790;product=MDR family MFS transporter;protein_id=WP_037574457.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	binding_site	124900	125083	.	+	.	ID=id-NZ_JAVRJR010000001.1:124900..125083;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000001.1	RefSeq	gene	125103	127541	.	+	.	ID=gene-RM588_RS00795;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=RM588_RS00795;old_locus_tag=RM588_00795
NZ_JAVRJR010000001.1	Protein Homology	CDS	125103	127541	.	+	0	ID=cds-WP_103159186.1;Parent=gene-RM588_RS00795;Dbxref=GenBank:WP_103159186.1;Name=WP_103159186.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=RM588_RS00795;product=leucine--tRNA ligase;protein_id=WP_103159186.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	127568	127879	.	+	.	ID=gene-RM588_RS00800;Name=RM588_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00800;old_locus_tag=RM588_00800
NZ_JAVRJR010000001.1	Protein Homology	CDS	127568	127879	.	+	0	ID=cds-WP_037574451.1;Parent=gene-RM588_RS00800;Dbxref=GenBank:WP_037574451.1;Name=WP_037574451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166097.1;locus_tag=RM588_RS00800;product=rhodanese-like domain-containing protein;protein_id=WP_037574451.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	128145	129407	.	-	.	ID=gene-RM588_RS00805;Name=RM588_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00805;old_locus_tag=RM588_00805
NZ_JAVRJR010000001.1	Protein Homology	CDS	128145	129407	.	-	0	ID=cds-WP_037574448.1;Parent=gene-RM588_RS00805;Dbxref=GenBank:WP_037574448.1;Name=WP_037574448.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500375.1;locus_tag=RM588_RS00805;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037574448.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	129524	131164	.	+	.	ID=gene-RM588_RS00810;Name=RM588_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00810;old_locus_tag=RM588_00810
NZ_JAVRJR010000001.1	Protein Homology	CDS	129524	131164	.	+	0	ID=cds-WP_037574447.1;Parent=gene-RM588_RS00810;Dbxref=GenBank:WP_037574447.1;Name=WP_037574447.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381978.1;locus_tag=RM588_RS00810;product=putative polysaccharide biosynthesis protein;protein_id=WP_037574447.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	131164	131880	.	+	.	ID=gene-RM588_RS00815;Name=RM588_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00815;old_locus_tag=RM588_00815
NZ_JAVRJR010000001.1	Protein Homology	CDS	131164	131880	.	+	0	ID=cds-WP_037574445.1;Parent=gene-RM588_RS00815;Dbxref=GenBank:WP_037574445.1;Name=WP_037574445.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507304.1;locus_tag=RM588_RS00815;product=pseudouridine synthase;protein_id=WP_037574445.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	131987	132406	.	+	.	ID=gene-RM588_RS00820;Name=RM588_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00820;old_locus_tag=RM588_00820
NZ_JAVRJR010000001.1	Protein Homology	CDS	131987	132406	.	+	0	ID=cds-WP_037574442.1;Parent=gene-RM588_RS00820;Dbxref=GenBank:WP_037574442.1;Name=WP_037574442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464301.1;locus_tag=RM588_RS00820;product=hypothetical protein;protein_id=WP_037574442.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	132588	133997	.	+	.	ID=gene-RM588_RS00825;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=RM588_RS00825;old_locus_tag=RM588_00825
NZ_JAVRJR010000001.1	Protein Homology	CDS	132588	133997	.	+	0	ID=cds-WP_103159183.1;Parent=gene-RM588_RS00825;Dbxref=GenBank:WP_103159183.1;Name=WP_103159183.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613617.1;locus_tag=RM588_RS00825;product=dipeptidase PepV;protein_id=WP_103159183.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	133999	134847	.	+	.	ID=gene-RM588_RS00830;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=RM588_RS00830;old_locus_tag=RM588_00830
NZ_JAVRJR010000001.1	Protein Homology	CDS	133999	134847	.	+	0	ID=cds-WP_037574439.1;Parent=gene-RM588_RS00830;Dbxref=GenBank:WP_037574439.1;Name=WP_037574439.1;Ontology_term=GO:0042853,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine:2-oxoglutarate transaminase activity|0047810||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510191.1;locus_tag=RM588_RS00830;product=D-amino-acid transaminase;protein_id=WP_037574439.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	135078	135869	.	+	.	ID=gene-RM588_RS00835;Name=RM588_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00835;old_locus_tag=RM588_00835
NZ_JAVRJR010000001.1	Protein Homology	CDS	135078	135869	.	+	0	ID=cds-WP_037574436.1;Parent=gene-RM588_RS00835;Dbxref=GenBank:WP_037574436.1;Name=WP_037574436.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=RM588_RS00835;product=phosphotransferase family protein;protein_id=WP_037574436.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	135884	136549	.	+	.	ID=gene-RM588_RS00840;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=RM588_RS00840;old_locus_tag=RM588_00840
NZ_JAVRJR010000001.1	Protein Homology	CDS	135884	136549	.	+	0	ID=cds-WP_037574434.1;Parent=gene-RM588_RS00840;Dbxref=GenBank:WP_037574434.1;Name=WP_037574434.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168407.1;locus_tag=RM588_RS00840;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_037574434.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	136636	137481	.	+	.	ID=gene-RM588_RS00845;Name=RM588_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00845;old_locus_tag=RM588_00845
NZ_JAVRJR010000001.1	Protein Homology	CDS	136636	137481	.	+	0	ID=cds-WP_037574431.1;Parent=gene-RM588_RS00845;Dbxref=GenBank:WP_037574431.1;Name=WP_037574431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500367.1;locus_tag=RM588_RS00845;product=YtnP family quorum-quenching lactonase;protein_id=WP_037574431.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	137645	137962	.	-	.	ID=gene-RM588_RS00850;Name=RM588_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00850;old_locus_tag=RM588_00850
NZ_JAVRJR010000001.1	Protein Homology	CDS	137645	137962	.	-	0	ID=cds-WP_037574429.1;Parent=gene-RM588_RS00850;Dbxref=GenBank:WP_037574429.1;Name=WP_037574429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165034.1;locus_tag=RM588_RS00850;product=hypothetical protein;protein_id=WP_037574429.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	138045	139124	.	+	.	ID=gene-RM588_RS00855;Name=RM588_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00855;old_locus_tag=RM588_00855
NZ_JAVRJR010000001.1	Protein Homology	CDS	138045	139124	.	+	0	ID=cds-WP_037574427.1;Parent=gene-RM588_RS00855;Dbxref=GenBank:WP_037574427.1;Name=WP_037574427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507312.1;locus_tag=RM588_RS00855;product=M42 family metallopeptidase;protein_id=WP_037574427.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	139138	139446	.	+	.	ID=gene-RM588_RS00860;Name=RM588_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00860;old_locus_tag=RM588_00860
NZ_JAVRJR010000001.1	Protein Homology	CDS	139138	139446	.	+	0	ID=cds-WP_037574424.1;Parent=gene-RM588_RS00860;Dbxref=GenBank:WP_037574424.1;Name=WP_037574424.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471204.1;locus_tag=RM588_RS00860;product=thioredoxin family protein;protein_id=WP_037574424.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	139539	140399	.	+	.	ID=gene-RM588_RS00865;Name=RM588_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00865;old_locus_tag=RM588_00865
NZ_JAVRJR010000001.1	Protein Homology	CDS	139539	140399	.	+	0	ID=cds-WP_037574421.1;Parent=gene-RM588_RS00865;Dbxref=GenBank:WP_037574421.1;Name=WP_037574421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613625.1;locus_tag=RM588_RS00865;product=DUF1444 domain-containing protein;protein_id=WP_037574421.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	140408	141007	.	+	.	ID=gene-RM588_RS00870;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=RM588_RS00870;old_locus_tag=RM588_00870
NZ_JAVRJR010000001.1	Protein Homology	CDS	140408	141007	.	+	0	ID=cds-WP_233654861.1;Parent=gene-RM588_RS00870;Dbxref=GenBank:WP_233654861.1;Name=WP_233654861.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165037.1;locus_tag=RM588_RS00870;product=YtpR family tRNA-binding protein;protein_id=WP_233654861.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	141022	144339	.	+	.	ID=gene-RM588_RS00875;Name=RM588_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00875;old_locus_tag=RM588_00875
NZ_JAVRJR010000001.1	Protein Homology	CDS	141022	144339	.	+	0	ID=cds-WP_107519604.1;Parent=gene-RM588_RS00875;Dbxref=GenBank:WP_107519604.1;Name=WP_107519604.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613627.1;locus_tag=RM588_RS00875;product=DNA translocase FtsK;protein_id=WP_107519604.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	144362	145675	.	+	.	ID=gene-RM588_RS00880;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=RM588_RS00880;old_locus_tag=RM588_00880
NZ_JAVRJR010000001.1	Protein Homology	CDS	144362	145675	.	+	0	ID=cds-WP_037574413.1;Parent=gene-RM588_RS00880;Dbxref=GenBank:WP_037574413.1;Name=WP_037574413.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500360.1;locus_tag=RM588_RS00880;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_037574413.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	pseudogene	145752	146228	.	+	.	ID=gene-RM588_RS00885;Name=RM588_RS00885;end_range=146228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS00885;old_locus_tag=RM588_00885;partial=true;pseudo=true
NZ_JAVRJR010000001.1	Protein Homology	CDS	145752	146228	.	+	0	ID=cds-RM588_RS00885;Parent=gene-RM588_RS00885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=146228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500359.1;locus_tag=RM588_RS00885;partial=true;product=DUF948 domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	146592	147527	.	+	.	ID=gene-RM588_RS00890;Name=RM588_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00890;old_locus_tag=RM588_00890
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	146592	147527	.	+	0	ID=cds-WP_037574412.1;Parent=gene-RM588_RS00890;Dbxref=GenBank:WP_037574412.1;Name=WP_037574412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS00890;product=hypothetical protein;protein_id=WP_037574412.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	147798	148889	.	+	.	ID=gene-RM588_RS00895;Name=RM588_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00895;old_locus_tag=RM588_00895
NZ_JAVRJR010000001.1	Protein Homology	CDS	147798	148889	.	+	0	ID=cds-WP_037574409.1;Parent=gene-RM588_RS00895;Dbxref=GenBank:WP_037574409.1;Name=WP_037574409.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=RM588_RS00895;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_037574409.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	149094	150086	.	+	.	ID=gene-RM588_RS00900;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=RM588_RS00900;old_locus_tag=RM588_00900
NZ_JAVRJR010000001.1	Protein Homology	CDS	149094	150086	.	+	0	ID=cds-WP_037574406.1;Parent=gene-RM588_RS00900;Dbxref=GenBank:WP_037574406.1;Name=WP_037574406.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=RM588_RS00900;product=catabolite control protein A;protein_id=WP_037574406.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	150202	151356	.	-	.	ID=gene-RM588_RS00905;Name=RM588_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00905;old_locus_tag=RM588_00905
NZ_JAVRJR010000001.1	Protein Homology	CDS	150202	151356	.	-	0	ID=cds-WP_105967523.1;Parent=gene-RM588_RS00905;Dbxref=GenBank:WP_105967523.1;Name=WP_105967523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900585.1;locus_tag=RM588_RS00905;product=acetoin utilization protein AcuC;protein_id=WP_105967523.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	151371	152003	.	-	.	ID=gene-RM588_RS00910;Name=RM588_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00910;old_locus_tag=RM588_00910
NZ_JAVRJR010000001.1	Protein Homology	CDS	151371	152003	.	-	0	ID=cds-WP_105965381.1;Parent=gene-RM588_RS00910;Dbxref=GenBank:WP_105965381.1;Name=WP_105965381.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613634.1;locus_tag=RM588_RS00910;product=GNAT family N-acetyltransferase;protein_id=WP_105965381.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	152159	153868	.	+	.	ID=gene-RM588_RS00915;Name=acsA;gbkey=Gene;gene=acsA;gene_biotype=protein_coding;locus_tag=RM588_RS00915;old_locus_tag=RM588_00915
NZ_JAVRJR010000001.1	Protein Homology	CDS	152159	153868	.	+	0	ID=cds-WP_105965382.1;Parent=gene-RM588_RS00915;Dbxref=GenBank:WP_105965382.1;Name=WP_105965382.1;gbkey=CDS;gene=acsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=RM588_RS00915;product=acetate--CoA ligase;protein_id=WP_105965382.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	154301	155968	.	+	.	ID=gene-RM588_RS00920;Name=RM588_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00920;old_locus_tag=RM588_00920
NZ_JAVRJR010000001.1	Protein Homology	CDS	154301	155968	.	+	0	ID=cds-WP_037574397.1;Parent=gene-RM588_RS00920;Dbxref=GenBank:WP_037574397.1;Name=WP_037574397.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=RM588_RS00920;product=formate--tetrahydrofolate ligase;protein_id=WP_037574397.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	156122	156943	.	-	.	ID=gene-RM588_RS00925;Name=RM588_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00925;old_locus_tag=RM588_00925
NZ_JAVRJR010000001.1	Protein Homology	CDS	156122	156943	.	-	0	ID=cds-WP_084276034.1;Parent=gene-RM588_RS00925;Dbxref=GenBank:WP_084276034.1;Name=WP_084276034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467399.1;locus_tag=RM588_RS00925;product=transglycosylase domain-containing protein;protein_id=WP_084276034.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	157354	158616	.	+	.	ID=gene-RM588_RS00930;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=RM588_RS00930;old_locus_tag=RM588_00930
NZ_JAVRJR010000001.1	Protein Homology	CDS	157354	158616	.	+	0	ID=cds-WP_107360592.1;Parent=gene-RM588_RS00930;Dbxref=GenBank:WP_107360592.1;Name=WP_107360592.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=RM588_RS00930;product=tyrosine--tRNA ligase;protein_id=WP_107360592.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	158665	159894	.	-	.	ID=gene-RM588_RS00935;Name=RM588_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00935;old_locus_tag=RM588_00935
NZ_JAVRJR010000001.1	Protein Homology	CDS	158665	159894	.	-	0	ID=cds-WP_107360591.1;Parent=gene-RM588_RS00935;Dbxref=GenBank:WP_107360591.1;Name=WP_107360591.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507328.1;locus_tag=RM588_RS00935;product=S1C family serine protease;protein_id=WP_107360591.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	160049	160666	.	+	.	ID=gene-RM588_RS00940;Name=RM588_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00940;old_locus_tag=RM588_00940
NZ_JAVRJR010000001.1	Protein Homology	CDS	160049	160666	.	+	0	ID=cds-WP_107360590.1;Parent=gene-RM588_RS00940;Dbxref=GenBank:WP_107360590.1;Name=WP_107360590.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467413.1;locus_tag=RM588_RS00940;product=lysophospholipid acyltransferase family protein;protein_id=WP_107360590.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	160870	161997	.	+	.	ID=gene-RM588_RS00945;Name=RM588_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00945;old_locus_tag=RM588_00945
NZ_JAVRJR010000001.1	Protein Homology	CDS	160870	161997	.	+	0	ID=cds-WP_107360589.1;Parent=gene-RM588_RS00945;Dbxref=GenBank:WP_107360589.1;Name=WP_107360589.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219645.1;locus_tag=RM588_RS00945;product=HAD family hydrolase;protein_id=WP_107360589.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	162137	163729	.	-	.	ID=gene-RM588_RS00950;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=RM588_RS00950;old_locus_tag=RM588_00950
NZ_JAVRJR010000001.1	Protein Homology	CDS	162137	163729	.	-	0	ID=cds-WP_103159187.1;Parent=gene-RM588_RS00950;Dbxref=GenBank:WP_103159187.1;Name=WP_103159187.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500339.1;locus_tag=RM588_RS00950;product=phosphoglycerate dehydrogenase;protein_id=WP_103159187.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	163719	164879	.	-	.	ID=gene-RM588_RS00955;Name=RM588_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00955;old_locus_tag=RM588_00955
NZ_JAVRJR010000001.1	Protein Homology	CDS	163719	164879	.	-	0	ID=cds-WP_103159172.1;Parent=gene-RM588_RS00955;Dbxref=GenBank:WP_103159172.1;Name=WP_103159172.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165054.1;locus_tag=RM588_RS00955;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_103159172.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	164969	165415	.	-	.	ID=gene-RM588_RS00960;Name=RM588_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00960;old_locus_tag=RM588_00960
NZ_JAVRJR010000001.1	Protein Homology	CDS	164969	165415	.	-	0	ID=cds-WP_103159171.1;Parent=gene-RM588_RS00960;Dbxref=GenBank:WP_103159171.1;Name=WP_103159171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729320.1;locus_tag=RM588_RS00960;product=SACOL1771 family peroxiredoxin;protein_id=WP_103159171.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	165492	166235	.	+	.	ID=gene-RM588_RS00965;Name=RM588_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00965;old_locus_tag=RM588_00965
NZ_JAVRJR010000001.1	Protein Homology	CDS	165492	166235	.	+	0	ID=cds-WP_103159170.1;Parent=gene-RM588_RS00965;Dbxref=GenBank:WP_103159170.1;Name=WP_103159170.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176108.1;locus_tag=RM588_RS00965;product=glycerophosphodiester phosphodiesterase;protein_id=WP_103159170.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	166366	167325	.	-	.	ID=gene-RM588_RS00970;Name=RM588_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00970;old_locus_tag=RM588_00970
NZ_JAVRJR010000001.1	Protein Homology	CDS	166366	167325	.	-	0	ID=cds-WP_037574379.1;Parent=gene-RM588_RS00970;Dbxref=GenBank:WP_037574379.1;Name=WP_037574379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766912.1;locus_tag=RM588_RS00970;product=ornithine cyclodeaminase family protein;protein_id=WP_037574379.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	167494	168096	.	-	.	ID=gene-RM588_RS00975;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=RM588_RS00975;old_locus_tag=RM588_00975
NZ_JAVRJR010000001.1	Protein Homology	CDS	167494	168096	.	-	0	ID=cds-WP_037574377.1;Parent=gene-RM588_RS00975;Dbxref=GenBank:WP_037574377.1;Name=WP_037574377.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=RM588_RS00975;product=30S ribosomal protein S4;protein_id=WP_037574377.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	168324	168779	.	-	.	ID=gene-RM588_RS00980;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=RM588_RS00980;old_locus_tag=RM588_00980
NZ_JAVRJR010000001.1	Protein Homology	CDS	168324	168779	.	-	0	ID=cds-WP_037574375.1;Parent=gene-RM588_RS00980;Dbxref=GenBank:WP_037574375.1;Name=WP_037574375.1;Note=Replaces NBR011098.;Ontology_term=GO:0033745;gbkey=CDS;gene=msrC;go_function=L-methionine (R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165371.1;locus_tag=RM588_RS00980;product=free L-methionine (R)-S-oxide reductase MsrC;protein_id=WP_037574375.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	168949	170649	.	+	.	ID=gene-RM588_RS00985;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=RM588_RS00985;old_locus_tag=RM588_00985
NZ_JAVRJR010000001.1	Protein Homology	CDS	168949	170649	.	+	0	ID=cds-WP_105962873.1;Parent=gene-RM588_RS00985;Dbxref=GenBank:WP_105962873.1;Name=WP_105962873.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425340.1;locus_tag=RM588_RS00985;product=septation ring formation regulator EzrA;protein_id=WP_105962873.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	170926	172062	.	+	.	ID=gene-RM588_RS00990;Name=RM588_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS00990;old_locus_tag=RM588_00990
NZ_JAVRJR010000001.1	Protein Homology	CDS	170926	172062	.	+	0	ID=cds-WP_103159166.1;Parent=gene-RM588_RS00990;Dbxref=GenBank:WP_103159166.1;Name=WP_103159166.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613657.1;locus_tag=RM588_RS00990;product=cysteine desulfurase family protein;protein_id=WP_103159166.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	172059	173279	.	+	.	ID=gene-RM588_RS00995;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=RM588_RS00995;old_locus_tag=RM588_00995
NZ_JAVRJR010000001.1	Protein Homology	CDS	172059	173279	.	+	0	ID=cds-WP_311540546.1;Parent=gene-RM588_RS00995;Dbxref=GenBank:WP_311540546.1;Name=WP_311540546.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474712.1;locus_tag=RM588_RS00995;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_311540546.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	173300	174073	.	+	.	ID=gene-RM588_RS01000;Name=RM588_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01000;old_locus_tag=RM588_01000
NZ_JAVRJR010000001.1	Protein Homology	CDS	173300	174073	.	+	0	ID=cds-WP_037574367.1;Parent=gene-RM588_RS01000;Dbxref=GenBank:WP_037574367.1;Name=WP_037574367.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500328.1;locus_tag=RM588_RS01000;product=sulfite exporter TauE/SafE family protein;protein_id=WP_037574367.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	174163	174657	.	+	.	ID=gene-RM588_RS01005;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=RM588_RS01005;old_locus_tag=RM588_01005
NZ_JAVRJR010000001.1	Protein Homology	CDS	174163	174657	.	+	0	ID=cds-WP_107366460.1;Parent=gene-RM588_RS01005;Dbxref=GenBank:WP_107366460.1;Name=WP_107366460.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275511.1;locus_tag=RM588_RS01005;product=thiol peroxidase;protein_id=WP_107366460.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	174729	175676	.	+	.	ID=gene-RM588_RS01010;Name=RM588_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01010;old_locus_tag=RM588_01010
NZ_JAVRJR010000001.1	Protein Homology	CDS	174729	175676	.	+	0	ID=cds-WP_105965391.1;Parent=gene-RM588_RS01010;Dbxref=GenBank:WP_105965391.1;Name=WP_105965391.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832682.1;locus_tag=RM588_RS01010;product=class I SAM-dependent methyltransferase;protein_id=WP_105965391.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	175758	176954	.	+	.	ID=gene-RM588_RS01015;Name=RM588_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01015;old_locus_tag=RM588_01015
NZ_JAVRJR010000001.1	Protein Homology	CDS	175758	176954	.	+	0	ID=cds-WP_037574360.1;Parent=gene-RM588_RS01015;Dbxref=GenBank:WP_037574360.1;Name=WP_037574360.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275513.1;locus_tag=RM588_RS01015;product=acetate kinase;protein_id=WP_037574360.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	177151	177651	.	-	.	ID=gene-RM588_RS01020;Name=RM588_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01020;old_locus_tag=RM588_01020
NZ_JAVRJR010000001.1	Protein Homology	CDS	177151	177651	.	-	0	ID=cds-WP_037574358.1;Parent=gene-RM588_RS01020;Dbxref=GenBank:WP_037574358.1;Name=WP_037574358.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169443.1;locus_tag=RM588_RS01020;product=universal stress protein;protein_id=WP_037574358.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	177799	178914	.	+	.	ID=gene-RM588_RS01025;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=RM588_RS01025;old_locus_tag=RM588_01025
NZ_JAVRJR010000001.1	Protein Homology	CDS	177799	178914	.	+	0	ID=cds-WP_311548046.1;Parent=gene-RM588_RS01025;Dbxref=GenBank:WP_311548046.1;Name=WP_311548046.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=L-alanine dehydrogenase (NAD+) activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500323.1;locus_tag=RM588_RS01025;product=alanine dehydrogenase;protein_id=WP_311548046.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	178992	180047	.	-	.	ID=gene-RM588_RS01030;Name=RM588_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01030;old_locus_tag=RM588_01030
NZ_JAVRJR010000001.1	Protein Homology	CDS	178992	180047	.	-	0	ID=cds-WP_311540547.1;Parent=gene-RM588_RS01030;Dbxref=GenBank:WP_311540547.1;Name=WP_311540547.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474995.1;locus_tag=RM588_RS01030;product=M24 family metallopeptidase;protein_id=WP_311540547.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	180170	180865	.	+	.	ID=gene-RM588_RS01035;Name=RM588_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01035;old_locus_tag=RM588_01035
NZ_JAVRJR010000001.1	Protein Homology	CDS	180170	180865	.	+	0	ID=cds-WP_037574354.1;Parent=gene-RM588_RS01035;Dbxref=GenBank:WP_037574354.1;Name=WP_037574354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503615.1;locus_tag=RM588_RS01035;product=metal-dependent hydrolase;protein_id=WP_037574354.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	181021	181434	.	-	.	ID=gene-RM588_RS01040;Name=RM588_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01040;old_locus_tag=RM588_01040
NZ_JAVRJR010000001.1	Protein Homology	CDS	181021	181434	.	-	0	ID=cds-WP_037574634.1;Parent=gene-RM588_RS01040;Dbxref=GenBank:WP_037574634.1;Name=WP_037574634.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830808.1;locus_tag=RM588_RS01040;product=universal stress protein;protein_id=WP_037574634.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	181620	182915	.	+	.	ID=gene-RM588_RS01045;Name=RM588_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01045;old_locus_tag=RM588_01045
NZ_JAVRJR010000001.1	Protein Homology	CDS	181620	182915	.	+	0	ID=cds-WP_103159068.1;Parent=gene-RM588_RS01045;Dbxref=GenBank:WP_103159068.1;Name=WP_103159068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613671.1;locus_tag=RM588_RS01045;product=DRTGG domain-containing protein;protein_id=WP_103159068.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	182929	183864	.	+	.	ID=gene-RM588_RS01050;Name=RM588_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01050;old_locus_tag=RM588_01050
NZ_JAVRJR010000001.1	Protein Homology	CDS	182929	183864	.	+	0	ID=cds-WP_105962870.1;Parent=gene-RM588_RS01050;Dbxref=GenBank:WP_105962870.1;Name=WP_105962870.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665952.1;locus_tag=RM588_RS01050;product=DHH family phosphoesterase;protein_id=WP_105962870.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	183889	187086	.	+	.	ID=gene-RM588_RS01055;Name=RM588_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01055;old_locus_tag=RM588_01055
NZ_JAVRJR010000001.1	Protein Homology	CDS	183889	187086	.	+	0	ID=cds-WP_311540548.1;Parent=gene-RM588_RS01055;Dbxref=GenBank:WP_311540548.1;Name=WP_311540548.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613673.1;locus_tag=RM588_RS01055;product=DNA polymerase III subunit alpha;protein_id=WP_311540548.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	187204	188433	.	+	.	ID=gene-RM588_RS01060;Name=ystJ;gbkey=Gene;gene=ystJ;gene_biotype=protein_coding;gene_synonym=maeB;locus_tag=RM588_RS01060;old_locus_tag=RM588_01060
NZ_JAVRJR010000001.1	Protein Homology	CDS	187204	188433	.	+	0	ID=cds-WP_311548047.1;Parent=gene-RM588_RS01060;Dbxref=GenBank:WP_311548047.1;Name=WP_311548047.1;gbkey=CDS;gene=ystJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500315.1;locus_tag=RM588_RS01060;product=NADP-dependent malic enzyme;protein_id=WP_311548047.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	188470	189330	.	+	.	ID=gene-RM588_RS01065;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=RM588_RS01065;old_locus_tag=RM588_01065
NZ_JAVRJR010000001.1	Protein Homology	CDS	188470	189330	.	+	0	ID=cds-WP_103159064.1;Parent=gene-RM588_RS01065;Dbxref=GenBank:WP_103159064.1;Name=WP_103159064.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440197.1;locus_tag=RM588_RS01065;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_103159064.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	189330	190274	.	+	.	ID=gene-RM588_RS01070;Name=RM588_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01070;old_locus_tag=RM588_01070
NZ_JAVRJR010000001.1	Protein Homology	CDS	189330	190274	.	+	0	ID=cds-WP_311540549.1;Parent=gene-RM588_RS01070;Dbxref=GenBank:WP_311540549.1;Name=WP_311540549.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=RM588_RS01070;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_311540549.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	190634	191605	.	+	.	ID=gene-RM588_RS01075;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=RM588_RS01075;old_locus_tag=RM588_01075
NZ_JAVRJR010000001.1	Protein Homology	CDS	190634	191605	.	+	0	ID=cds-WP_105965395.1;Parent=gene-RM588_RS01075;Dbxref=GenBank:WP_105965395.1;Name=WP_105965395.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=RM588_RS01075;product=6-phosphofructokinase;protein_id=WP_105965395.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	191622	193382	.	+	.	ID=gene-RM588_RS01080;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=RM588_RS01080;old_locus_tag=RM588_01080
NZ_JAVRJR010000001.1	Protein Homology	CDS	191622	193382	.	+	0	ID=cds-WP_105962865.1;Parent=gene-RM588_RS01080;Dbxref=GenBank:WP_105962865.1;Name=WP_105962865.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=RM588_RS01080;product=pyruvate kinase;protein_id=WP_105962865.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	193780	194901	.	+	.	ID=gene-RM588_RS01085;Name=RM588_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01085;old_locus_tag=RM588_01085
NZ_JAVRJR010000001.1	Protein Homology	CDS	193780	194901	.	+	0	ID=cds-WP_107360569.1;Parent=gene-RM588_RS01085;Dbxref=GenBank:WP_107360569.1;Name=WP_107360569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502341.1;locus_tag=RM588_RS01085;product=citrate synthase;protein_id=WP_107360569.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	194951	196213	.	+	.	ID=gene-RM588_RS01090;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=RM588_RS01090;old_locus_tag=RM588_01090
NZ_JAVRJR010000001.1	Protein Homology	CDS	194951	196213	.	+	0	ID=cds-WP_107360570.1;Parent=gene-RM588_RS01090;Dbxref=GenBank:WP_107360570.1;Name=WP_107360570.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613680.1;locus_tag=RM588_RS01090;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_107360570.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	196553	197257	.	+	.	ID=gene-RM588_RS01095;Name=RM588_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01095;old_locus_tag=RM588_01095
NZ_JAVRJR010000001.1	Protein Homology	CDS	196553	197257	.	+	0	ID=cds-WP_037574326.1;Parent=gene-RM588_RS01095;Dbxref=GenBank:WP_037574326.1;Name=WP_037574326.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220139.1;locus_tag=RM588_RS01095;product=response regulator transcription factor;protein_id=WP_037574326.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	197258	198958	.	+	.	ID=gene-RM588_RS01100;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=RM588_RS01100;old_locus_tag=RM588_01100
NZ_JAVRJR010000001.1	Protein Homology	CDS	197258	198958	.	+	0	ID=cds-WP_037574323.1;Parent=gene-RM588_RS01100;Dbxref=GenBank:WP_037574323.1;Name=WP_037574323.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729294.1;locus_tag=RM588_RS01100;product=two-component system histidine kinase PnpS;protein_id=WP_037574323.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	199185	201812	.	+	.	ID=gene-RM588_RS01105;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=RM588_RS01105;old_locus_tag=RM588_01105
NZ_JAVRJR010000001.1	Protein Homology	CDS	199185	201812	.	+	0	ID=cds-WP_107360572.1;Parent=gene-RM588_RS01105;Dbxref=GenBank:WP_107360572.1;Name=WP_107360572.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187812.1;locus_tag=RM588_RS01105;product=DNA polymerase I;protein_id=WP_107360572.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	201828	202700	.	+	.	ID=gene-RM588_RS01110;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=RM588_RS01110;old_locus_tag=RM588_01110
NZ_JAVRJR010000001.1	Protein Homology	CDS	201828	202700	.	+	0	ID=cds-WP_107360573.1;Parent=gene-RM588_RS01110;Dbxref=GenBank:WP_107360573.1;Name=WP_107360573.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613684.1;locus_tag=RM588_RS01110;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_107360573.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	202716	203321	.	+	.	ID=gene-RM588_RS01115;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=RM588_RS01115;old_locus_tag=RM588_01115
NZ_JAVRJR010000001.1	Protein Homology	CDS	202716	203321	.	+	0	ID=cds-WP_105962861.1;Parent=gene-RM588_RS01115;Dbxref=GenBank:WP_105962861.1;Name=WP_105962861.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493142.1;locus_tag=RM588_RS01115;product=dephospho-CoA kinase;protein_id=WP_105962861.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	203550	204560	.	+	.	ID=gene-RM588_RS01120;Name=RM588_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01120;old_locus_tag=RM588_01120
NZ_JAVRJR010000001.1	Protein Homology	CDS	203550	204560	.	+	0	ID=cds-WP_037574312.1;Parent=gene-RM588_RS01120;Dbxref=GenBank:WP_037574312.1;Name=WP_037574312.1;Ontology_term=GO:0006006,GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613686.1;locus_tag=RM588_RS01120;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037574312.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	204694	205161	.	+	.	ID=gene-RM588_RS01125;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=RM588_RS01125;old_locus_tag=RM588_01125
NZ_JAVRJR010000001.1	Protein Homology	CDS	204694	205161	.	+	0	ID=cds-WP_037574309.1;Parent=gene-RM588_RS01125;Dbxref=GenBank:WP_037574309.1;Name=WP_037574309.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165113.1;locus_tag=RM588_RS01125;product=transcriptional regulator NrdR;protein_id=WP_037574309.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	205163	206524	.	+	.	ID=gene-RM588_RS01130;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM588_RS01130;old_locus_tag=RM588_01130
NZ_JAVRJR010000001.1	Protein Homology	CDS	205163	206524	.	+	0	ID=cds-WP_233654862.1;Parent=gene-RM588_RS01130;Dbxref=GenBank:WP_233654862.1;Name=WP_233654862.1;Ontology_term=GO:0006269,GO:0003677,GO:1990077;gbkey=CDS;gene=dnaB;go_component=primosome complex|1990077||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729291.1;locus_tag=RM588_RS01130;product=replicative helicase loading/DNA remodeling protein DnaB;protein_id=WP_233654862.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	206521	207444	.	+	.	ID=gene-RM588_RS01135;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=RM588_RS01135;old_locus_tag=RM588_01135
NZ_JAVRJR010000001.1	Protein Homology	CDS	206521	207444	.	+	0	ID=cds-WP_233654863.1;Parent=gene-RM588_RS01135;Dbxref=GenBank:WP_233654863.1;Name=WP_233654863.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425307.1;locus_tag=RM588_RS01135;product=primosomal protein DnaI;protein_id=WP_233654863.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	207748	209685	.	+	.	ID=gene-RM588_RS01140;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=RM588_RS01140;old_locus_tag=RM588_01140
NZ_JAVRJR010000001.1	Protein Homology	CDS	207748	209685	.	+	0	ID=cds-WP_107360576.1;Parent=gene-RM588_RS01140;Dbxref=GenBank:WP_107360576.1;Name=WP_107360576.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=RM588_RS01140;product=threonine--tRNA ligase;protein_id=WP_107360576.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	riboswitch	209737	209911	.	+	.	ID=id-NZ_JAVRJR010000001.1:209737..209911;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000001.1	RefSeq	gene	210018	211526	.	+	.	ID=gene-RM588_RS01145;Name=RM588_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01145;old_locus_tag=RM588_01145
NZ_JAVRJR010000001.1	Protein Homology	CDS	210018	211526	.	+	0	ID=cds-WP_105967529.1;Parent=gene-RM588_RS01145;Dbxref=GenBank:WP_105967529.1;Name=WP_105967529.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500292.1;locus_tag=RM588_RS01145;product=amino acid permease;protein_id=WP_105967529.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	sequence_feature	211568	211702	.	+	.	ID=id-NZ_JAVRJR010000001.1:211568..211702;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00558,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000001.1	RefSeq	gene	211728	212255	.	+	.	ID=gene-RM588_RS01150;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=RM588_RS01150;old_locus_tag=RM588_01150
NZ_JAVRJR010000001.1	Protein Homology	CDS	211728	212255	.	+	0	ID=cds-WP_105962892.1;Parent=gene-RM588_RS01150;Dbxref=GenBank:WP_105962892.1;Name=WP_105962892.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=RM588_RS01150;product=translation initiation factor IF-3;protein_id=WP_105962892.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	212282	212482	.	+	.	ID=gene-RM588_RS01155;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=RM588_RS01155;old_locus_tag=RM588_01155
NZ_JAVRJR010000001.1	Protein Homology	CDS	212282	212482	.	+	0	ID=cds-WP_105962858.1;Parent=gene-RM588_RS01155;Dbxref=GenBank:WP_105962858.1;Name=WP_105962858.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=RM588_RS01155;product=50S ribosomal protein L35;protein_id=WP_105962858.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	212537	212893	.	+	.	ID=gene-RM588_RS01160;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=RM588_RS01160;old_locus_tag=RM588_01160
NZ_JAVRJR010000001.1	Protein Homology	CDS	212537	212893	.	+	0	ID=cds-WP_037574297.1;Parent=gene-RM588_RS01160;Dbxref=GenBank:WP_037574297.1;Name=WP_037574297.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=RM588_RS01160;product=50S ribosomal protein L20;protein_id=WP_037574297.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	213045	213656	.	+	.	ID=gene-RM588_RS01165;Name=RM588_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01165;old_locus_tag=RM588_01165
NZ_JAVRJR010000001.1	Protein Homology	CDS	213045	213656	.	+	0	ID=cds-WP_311548048.1;Parent=gene-RM588_RS01165;Dbxref=GenBank:WP_311548048.1;Name=WP_311548048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835437.1;locus_tag=RM588_RS01165;product=NUDIX domain-containing protein;protein_id=WP_311548048.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	213666	214589	.	+	.	ID=gene-RM588_RS01170;Name=RM588_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01170;old_locus_tag=RM588_01170
NZ_JAVRJR010000001.1	Protein Homology	CDS	213666	214589	.	+	0	ID=cds-WP_105965404.1;Parent=gene-RM588_RS01170;Dbxref=GenBank:WP_105965404.1;Name=WP_105965404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425300.1;locus_tag=RM588_RS01170;product=hypothetical protein;protein_id=WP_105965404.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	214674	215987	.	+	.	ID=gene-RM588_RS01175;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=RM588_RS01175;old_locus_tag=RM588_01175
NZ_JAVRJR010000001.1	Protein Homology	CDS	214674	215987	.	+	0	ID=cds-WP_105965405.1;Parent=gene-RM588_RS01175;Dbxref=GenBank:WP_105965405.1;Name=WP_105965405.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165121.1;locus_tag=RM588_RS01175;product=trigger factor;protein_id=WP_105965405.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	216183	217445	.	+	.	ID=gene-RM588_RS01180;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=RM588_RS01180;old_locus_tag=RM588_01180
NZ_JAVRJR010000001.1	Protein Homology	CDS	216183	217445	.	+	0	ID=cds-WP_103159056.1;Parent=gene-RM588_RS01180;Dbxref=GenBank:WP_103159056.1;Name=WP_103159056.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=RM588_RS01180;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_103159056.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	217517	218110	.	+	.	ID=gene-RM588_RS01185;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=RM588_RS01185;old_locus_tag=RM588_01185
NZ_JAVRJR010000001.1	Protein Homology	CDS	217517	218110	.	+	0	ID=cds-WP_103159055.1;Parent=gene-RM588_RS01185;Dbxref=GenBank:WP_103159055.1;Name=WP_103159055.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425297.1;locus_tag=RM588_RS01185;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_103159055.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	218226	219566	.	+	.	ID=gene-RM588_RS01190;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=RM588_RS01190;old_locus_tag=RM588_01190
NZ_JAVRJR010000001.1	Protein Homology	CDS	218226	219566	.	+	0	ID=cds-WP_037574280.1;Parent=gene-RM588_RS01190;Dbxref=GenBank:WP_037574280.1;Name=WP_037574280.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase (NADP+) activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381867.1;locus_tag=RM588_RS01190;product=glutamyl-tRNA reductase;protein_id=WP_037574280.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	219581	220417	.	+	.	ID=gene-RM588_RS01195;Name=RM588_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01195;old_locus_tag=RM588_01195
NZ_JAVRJR010000001.1	Protein Homology	CDS	219581	220417	.	+	0	ID=cds-WP_037574277.1;Parent=gene-RM588_RS01195;Dbxref=GenBank:WP_037574277.1;Name=WP_037574277.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729282.1;locus_tag=RM588_RS01195;product=cytochrome C assembly family protein;protein_id=WP_037574277.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	220439	221365	.	+	.	ID=gene-RM588_RS01200;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=RM588_RS01200;old_locus_tag=RM588_01200
NZ_JAVRJR010000001.1	Protein Homology	CDS	220439	221365	.	+	0	ID=cds-WP_233654864.1;Parent=gene-RM588_RS01200;Dbxref=GenBank:WP_233654864.1;Name=WP_233654864.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500279.1;locus_tag=RM588_RS01200;product=hydroxymethylbilane synthase;protein_id=WP_233654864.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	221376	222065	.	+	.	ID=gene-RM588_RS01205;Name=RM588_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01205;old_locus_tag=RM588_01205
NZ_JAVRJR010000001.1	Protein Homology	CDS	221376	222065	.	+	0	ID=cds-WP_037574271.1;Parent=gene-RM588_RS01205;Dbxref=GenBank:WP_037574271.1;Name=WP_037574271.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,obsolete protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613704.1;locus_tag=RM588_RS01205;product=uroporphyrinogen-III synthase;protein_id=WP_037574271.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	222055	223032	.	+	.	ID=gene-RM588_RS01210;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=RM588_RS01210;old_locus_tag=RM588_01210
NZ_JAVRJR010000001.1	Protein Homology	CDS	222055	223032	.	+	0	ID=cds-WP_037574625.1;Parent=gene-RM588_RS01210;Dbxref=GenBank:WP_037574625.1;Name=WP_037574625.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165127.1;locus_tag=RM588_RS01210;product=porphobilinogen synthase;protein_id=WP_037574625.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	223045	224328	.	+	.	ID=gene-RM588_RS01215;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=RM588_RS01215;old_locus_tag=RM588_01215
NZ_JAVRJR010000001.1	Protein Homology	CDS	223045	224328	.	+	0	ID=cds-WP_037574268.1;Parent=gene-RM588_RS01215;Dbxref=GenBank:WP_037574268.1;Name=WP_037574268.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458906.1;locus_tag=RM588_RS01215;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_037574268.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	224490	225572	.	+	.	ID=gene-RM588_RS01220;Name=RM588_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01220;old_locus_tag=RM588_01220
NZ_JAVRJR010000001.1	Protein Homology	CDS	224490	225572	.	+	0	ID=cds-WP_105967531.1;Parent=gene-RM588_RS01220;Dbxref=GenBank:WP_105967531.1;Name=WP_105967531.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443295.1;locus_tag=RM588_RS01220;product=AbrB family protein;protein_id=WP_105967531.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	225606	226154	.	-	.	ID=gene-RM588_RS01225;Name=RM588_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01225;old_locus_tag=RM588_01225
NZ_JAVRJR010000001.1	Protein Homology	CDS	225606	226154	.	-	0	ID=cds-WP_037574262.1;Parent=gene-RM588_RS01225;Dbxref=GenBank:WP_037574262.1;Name=WP_037574262.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169485.1;locus_tag=RM588_RS01225;product=DNA-3-methyladenine glycosylase I;protein_id=WP_037574262.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	binding_site	226211	226420	.	+	.	ID=id-NZ_JAVRJR010000001.1:226211..226420;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000001.1	RefSeq	gene	226461	229091	.	+	.	ID=gene-RM588_RS01230;Name=RM588_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01230;old_locus_tag=RM588_01230
NZ_JAVRJR010000001.1	Protein Homology	CDS	226461	229091	.	+	0	ID=cds-WP_105965410.1;Parent=gene-RM588_RS01230;Dbxref=GenBank:WP_105965410.1;Name=WP_105965410.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=RM588_RS01230;product=valine--tRNA ligase;protein_id=WP_105965410.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	229103	230365	.	+	.	ID=gene-RM588_RS01235;Name=RM588_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01235;old_locus_tag=RM588_01235
NZ_JAVRJR010000001.1	Protein Homology	CDS	229103	230365	.	+	0	ID=cds-WP_037574258.1;Parent=gene-RM588_RS01235;Dbxref=GenBank:WP_037574258.1;Name=WP_037574258.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510278.1;locus_tag=RM588_RS01235;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_037574258.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	230544	231245	.	+	.	ID=gene-RM588_RS01240;Name=RM588_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01240;old_locus_tag=RM588_01240
NZ_JAVRJR010000001.1	Protein Homology	CDS	230544	231245	.	+	0	ID=cds-WP_255201405.1;Parent=gene-RM588_RS01240;Dbxref=GenBank:WP_255201405.1;Name=WP_255201405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.7;locus_tag=RM588_RS01240;product=prepilin peptidase;protein_id=WP_255201405.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	231245	231808	.	+	.	ID=gene-RM588_RS01245;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=RM588_RS01245;old_locus_tag=RM588_01245
NZ_JAVRJR010000001.1	Protein Homology	CDS	231245	231808	.	+	0	ID=cds-WP_311540550.1;Parent=gene-RM588_RS01245;Dbxref=GenBank:WP_311540550.1;Name=WP_311540550.1;gbkey=CDS;gene=radC;inference=COORDINATES: protein motif:HMM:TIGR00608.1;locus_tag=RM588_RS01245;product=RadC family protein;protein_id=WP_311540550.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	231924	233009	.	+	.	ID=gene-RM588_RS01250;Name=RM588_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01250;old_locus_tag=RM588_01250
NZ_JAVRJR010000001.1	Protein Homology	CDS	231924	233009	.	+	0	ID=cds-WP_000867968.1;Parent=gene-RM588_RS01250;Dbxref=GenBank:WP_000867968.1;Name=WP_000867968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867968.1;locus_tag=RM588_RS01250;product=phage lytic cycle repressor MrpR family protein;protein_id=WP_000867968.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	233006	234904	.	+	.	ID=gene-RM588_RS01255;Name=RM588_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01255;old_locus_tag=RM588_01255
NZ_JAVRJR010000001.1	Protein Homology	CDS	233006	234904	.	+	0	ID=cds-WP_000178564.1;Parent=gene-RM588_RS01255;Dbxref=GenBank:WP_000178564.1;Name=WP_000178564.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190469.1;locus_tag=RM588_RS01255;product=tyrosine-type recombinase/integrase;protein_id=WP_000178564.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	234905	235288	.	+	.	ID=gene-RM588_RS01260;Name=RM588_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01260;old_locus_tag=RM588_01260
NZ_JAVRJR010000001.1	Protein Homology	CDS	234905	235288	.	+	0	ID=cds-WP_000517973.1;Parent=gene-RM588_RS01260;Dbxref=GenBank:WP_000517973.1;Name=WP_000517973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361059.1;locus_tag=RM588_RS01260;product=DUF6262 family protein;protein_id=WP_000517973.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	235605	237179	.	+	.	ID=gene-RM588_RS01265;Name=RM588_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01265;old_locus_tag=RM588_01265
NZ_JAVRJR010000001.1	Protein Homology	CDS	235605	237179	.	+	0	ID=cds-WP_000698182.1;Parent=gene-RM588_RS01265;Dbxref=GenBank:WP_000698182.1;Name=WP_000698182.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698182.1;locus_tag=RM588_RS01265;product=Vga family ABC-F type ribosomal protection protein;protein_id=WP_000698182.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	pseudogene	237252	237398	.	+	.	ID=gene-RM588_RS01270;Name=RM588_RS01270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS01270;old_locus_tag=RM588_01270;partial=true;pseudo=true;start_range=.,237252
NZ_JAVRJR010000001.1	Protein Homology	CDS	237252	237398	.	+	0	ID=cds-RM588_RS01270;Parent=gene-RM588_RS01270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443283.1;locus_tag=RM588_RS01270;partial=true;product=JAB domain-containing protein;pseudo=true;start_range=.,237252;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	237739	238197	.	+	.	ID=gene-RM588_RS01275;Name=RM588_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01275;old_locus_tag=RM588_01275
NZ_JAVRJR010000001.1	Protein Homology	CDS	237739	238197	.	+	0	ID=cds-WP_105965411.1;Parent=gene-RM588_RS01275;Dbxref=GenBank:WP_105965411.1;Name=WP_105965411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729274.1;locus_tag=RM588_RS01275;product=DUF4930 family protein;protein_id=WP_105965411.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	238271	238408	.	+	.	ID=gene-RM588_RS01280;Name=RM588_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01280;old_locus_tag=RM588_01280
NZ_JAVRJR010000001.1	Protein Homology	CDS	238271	238408	.	+	0	ID=cds-WP_165806092.1;Parent=gene-RM588_RS01280;Dbxref=GenBank:WP_165806092.1;Name=WP_165806092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471526.1;locus_tag=RM588_RS01280;product=hypothetical protein;protein_id=WP_165806092.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	238951	239787	.	+	.	ID=gene-RM588_RS01285;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=RM588_RS01285;old_locus_tag=RM588_01285
NZ_JAVRJR010000001.1	Protein Homology	CDS	238951	239787	.	+	0	ID=cds-WP_105965412.1;Parent=gene-RM588_RS01285;Dbxref=GenBank:WP_105965412.1;Name=WP_105965412.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165138.1;locus_tag=RM588_RS01285;product=rod shape-determining protein MreC;protein_id=WP_105965412.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	239784	240308	.	+	.	ID=gene-RM588_RS01290;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=RM588_RS01290;old_locus_tag=RM588_01290
NZ_JAVRJR010000001.1	Protein Homology	CDS	239784	240308	.	+	0	ID=cds-WP_107360770.1;Parent=gene-RM588_RS01290;Dbxref=GenBank:WP_107360770.1;Name=WP_107360770.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: protein motif:HMM:NF016019.7;locus_tag=RM588_RS01290;product=rod shape-determining protein MreD;protein_id=WP_107360770.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	sequence_feature	240337	240409	.	+	.	ID=id-NZ_JAVRJR010000001.1:240337..240409;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00559,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000001.1	RefSeq	gene	240421	240729	.	+	.	ID=gene-RM588_RS01295;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=RM588_RS01295;old_locus_tag=RM588_01295
NZ_JAVRJR010000001.1	Protein Homology	CDS	240421	240729	.	+	0	ID=cds-WP_037574239.1;Parent=gene-RM588_RS01295;Dbxref=GenBank:WP_037574239.1;Name=WP_037574239.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364931.1;locus_tag=RM588_RS01295;product=50S ribosomal protein L21;protein_id=WP_037574239.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	240732	241052	.	+	.	ID=gene-RM588_RS01300;Name=RM588_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01300;old_locus_tag=RM588_01300
NZ_JAVRJR010000001.1	Protein Homology	CDS	240732	241052	.	+	0	ID=cds-WP_037574236.1;Parent=gene-RM588_RS01300;Dbxref=GenBank:WP_037574236.1;Name=WP_037574236.1;Ontology_term=GO:0006508,GO:0042254,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=RM588_RS01300;product=ribosomal-processing cysteine protease Prp;protein_id=WP_037574236.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	241063	241347	.	+	.	ID=gene-RM588_RS01305;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=RM588_RS01305;old_locus_tag=RM588_01305
NZ_JAVRJR010000001.1	Protein Homology	CDS	241063	241347	.	+	0	ID=cds-WP_037574233.1;Parent=gene-RM588_RS01305;Dbxref=GenBank:WP_037574233.1;Name=WP_037574233.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=RM588_RS01305;product=50S ribosomal protein L27;protein_id=WP_037574233.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	241578	242867	.	+	.	ID=gene-RM588_RS01310;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=RM588_RS01310;old_locus_tag=RM588_01310
NZ_JAVRJR010000001.1	Protein Homology	CDS	241578	242867	.	+	0	ID=cds-WP_037574230.1;Parent=gene-RM588_RS01310;Dbxref=GenBank:WP_037574230.1;Name=WP_037574230.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=RM588_RS01310;product=GTPase ObgE;protein_id=WP_037574230.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	242883	243326	.	+	.	ID=gene-RM588_RS01315;Name=RM588_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01315;old_locus_tag=RM588_01315
NZ_JAVRJR010000001.1	Protein Homology	CDS	242883	243326	.	+	0	ID=cds-WP_037574227.1;Parent=gene-RM588_RS01315;Dbxref=GenBank:WP_037574227.1;Name=WP_037574227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169498.1;locus_tag=RM588_RS01315;product=ACT domain-containing protein;protein_id=WP_037574227.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	243339	243941	.	+	.	ID=gene-RM588_RS01320;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=RM588_RS01320;old_locus_tag=RM588_01320
NZ_JAVRJR010000001.1	Protein Homology	CDS	243339	243941	.	+	0	ID=cds-WP_105965414.1;Parent=gene-RM588_RS01320;Dbxref=GenBank:WP_105965414.1;Name=WP_105965414.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275577.1;locus_tag=RM588_RS01320;product=Holliday junction branch migration protein RuvA;protein_id=WP_105965414.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	243955	244950	.	+	.	ID=gene-RM588_RS01325;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=RM588_RS01325;old_locus_tag=RM588_01325
NZ_JAVRJR010000001.1	Protein Homology	CDS	243955	244950	.	+	0	ID=cds-WP_105965415.1;Parent=gene-RM588_RS01325;Dbxref=GenBank:WP_105965415.1;Name=WP_105965415.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219741.1;locus_tag=RM588_RS01325;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_105965415.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	244968	245993	.	+	.	ID=gene-RM588_RS01330;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=RM588_RS01330;old_locus_tag=RM588_01330
NZ_JAVRJR010000001.1	Protein Homology	CDS	244968	245993	.	+	0	ID=cds-WP_037574217.1;Parent=gene-RM588_RS01330;Dbxref=GenBank:WP_037574217.1;Name=WP_037574217.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=RM588_RS01330;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_037574217.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	246012	247151	.	+	.	ID=gene-RM588_RS01335;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=RM588_RS01335;old_locus_tag=RM588_01335
NZ_JAVRJR010000001.1	Protein Homology	CDS	246012	247151	.	+	0	ID=cds-WP_037574214.1;Parent=gene-RM588_RS01335;Dbxref=GenBank:WP_037574214.1;Name=WP_037574214.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=RM588_RS01335;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_037574214.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	247167	247430	.	+	.	ID=gene-RM588_RS01340;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=RM588_RS01340;old_locus_tag=RM588_01340
NZ_JAVRJR010000001.1	Protein Homology	CDS	247167	247430	.	+	0	ID=cds-WP_037574211.1;Parent=gene-RM588_RS01340;Dbxref=GenBank:WP_037574211.1;Name=WP_037574211.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165144.1;locus_tag=RM588_RS01340;product=preprotein translocase subunit YajC;protein_id=WP_037574211.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	247799	250078	.	+	.	ID=gene-RM588_RS01345;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=RM588_RS01345;old_locus_tag=RM588_01345
NZ_JAVRJR010000001.1	Protein Homology	CDS	247799	250078	.	+	0	ID=cds-WP_119512835.1;Parent=gene-RM588_RS01345;Dbxref=GenBank:WP_119512835.1;Name=WP_119512835.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804882.1;locus_tag=RM588_RS01345;product=protein translocase subunit SecDF;protein_id=WP_119512835.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	250683	252965	.	+	.	ID=gene-RM588_RS01350;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=RM588_RS01350;old_locus_tag=RM588_01350
NZ_JAVRJR010000001.1	Protein Homology	CDS	250683	252965	.	+	0	ID=cds-WP_311548049.1;Parent=gene-RM588_RS01350;Dbxref=GenBank:WP_311548049.1;Name=WP_311548049.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613725.1;locus_tag=RM588_RS01350;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_311548049.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	252977	253495	.	+	.	ID=gene-RM588_RS01355;Name=RM588_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01355;old_locus_tag=RM588_01355
NZ_JAVRJR010000001.1	Protein Homology	CDS	252977	253495	.	+	0	ID=cds-WP_311540554.1;Parent=gene-RM588_RS01355;Dbxref=GenBank:WP_311540554.1;Name=WP_311540554.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=RM588_RS01355;product=adenine phosphoribosyltransferase;protein_id=WP_311540554.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	253674	255863	.	+	.	ID=gene-RM588_RS01360;Name=RM588_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01360;old_locus_tag=RM588_01360
NZ_JAVRJR010000001.1	Protein Homology	CDS	253674	255863	.	+	0	ID=cds-WP_037574201.1;Parent=gene-RM588_RS01360;Dbxref=GenBank:WP_037574201.1;Name=WP_037574201.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=RM588_RS01360;product=RelA/SpoT family protein;protein_id=WP_037574201.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	255875	256327	.	+	.	ID=gene-RM588_RS01365;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=RM588_RS01365;old_locus_tag=RM588_01365
NZ_JAVRJR010000001.1	Protein Homology	CDS	255875	256327	.	+	0	ID=cds-WP_103159045.1;Parent=gene-RM588_RS01365;Dbxref=GenBank:WP_103159045.1;Name=WP_103159045.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275586.1;locus_tag=RM588_RS01365;product=D-aminoacyl-tRNA deacylase;protein_id=WP_103159045.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	256324	257199	.	+	.	ID=gene-RM588_RS01370;Name=RM588_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01370;old_locus_tag=RM588_01370
NZ_JAVRJR010000001.1	Protein Homology	CDS	256324	257199	.	+	0	ID=cds-WP_103159044.1;Parent=gene-RM588_RS01370;Dbxref=GenBank:WP_103159044.1;Name=WP_103159044.1;Ontology_term=GO:0009253,GO:0071555,GO:0005515,GO:0008745,GO:0046872,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA,proline-rich region binding|0070064||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=RM588_RS01370;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_103159044.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	257530	258801	.	+	.	ID=gene-RM588_RS01375;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=RM588_RS01375;old_locus_tag=RM588_01375
NZ_JAVRJR010000001.1	Protein Homology	CDS	257530	258801	.	+	0	ID=cds-WP_105965421.1;Parent=gene-RM588_RS01375;Dbxref=GenBank:WP_105965421.1;Name=WP_105965421.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165152.1;locus_tag=RM588_RS01375;product=histidine--tRNA ligase;protein_id=WP_105965421.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	258801	260567	.	+	.	ID=gene-RM588_RS01380;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=RM588_RS01380;old_locus_tag=RM588_01380
NZ_JAVRJR010000001.1	Protein Homology	CDS	258801	260567	.	+	0	ID=cds-WP_105962849.1;Parent=gene-RM588_RS01380;Dbxref=GenBank:WP_105962849.1;Name=WP_105962849.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=RM588_RS01380;product=aspartate--tRNA ligase;protein_id=WP_105962849.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	260620	260811	.	+	.	ID=gene-RM588_RS01385;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=RM588_RS01385;old_locus_tag=RM588_01385
NZ_JAVRJR010000001.1	cmsearch	ncRNA	260620	260811	.	+	.	ID=rna-RM588_RS01385;Parent=gene-RM588_RS01385;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS01385;product=6S RNA
NZ_JAVRJR010000001.1	cmsearch	exon	260620	260811	.	+	.	ID=exon-RM588_RS01385-1;Parent=rna-RM588_RS01385;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS01385;product=6S RNA
NZ_JAVRJR010000001.1	RefSeq	gene	260875	261642	.	+	.	ID=gene-RM588_RS01390;Name=RM588_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01390;old_locus_tag=RM588_01390
NZ_JAVRJR010000001.1	Protein Homology	CDS	260875	261642	.	+	0	ID=cds-WP_037574186.1;Parent=gene-RM588_RS01390;Dbxref=GenBank:WP_037574186.1;Name=WP_037574186.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613732.1;locus_tag=RM588_RS01390;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_037574186.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	261691	262950	.	-	.	ID=gene-RM588_RS01395;Name=RM588_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01395;old_locus_tag=RM588_01395
NZ_JAVRJR010000001.1	Protein Homology	CDS	261691	262950	.	-	0	ID=cds-WP_037574183.1;Parent=gene-RM588_RS01395;Dbxref=GenBank:WP_037574183.1;Name=WP_037574183.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467523.1;locus_tag=RM588_RS01395;product=replication-associated recombination protein A;protein_id=WP_037574183.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	263094	263513	.	+	.	ID=gene-RM588_RS01400;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=RM588_RS01400;old_locus_tag=RM588_01400
NZ_JAVRJR010000001.1	Protein Homology	CDS	263094	263513	.	+	0	ID=cds-WP_037574180.1;Parent=gene-RM588_RS01400;Dbxref=GenBank:WP_037574180.1;Name=WP_037574180.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=RM588_RS01400;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_037574180.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	263584	264414	.	+	.	ID=gene-RM588_RS01405;Name=RM588_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01405;old_locus_tag=RM588_01405
NZ_JAVRJR010000001.1	Protein Homology	CDS	263584	264414	.	+	0	ID=cds-WP_037574178.1;Parent=gene-RM588_RS01405;Dbxref=GenBank:WP_037574178.1;Name=WP_037574178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613735.1;locus_tag=RM588_RS01405;product=aldo/keto reductase;protein_id=WP_037574178.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	264508	264663	.	+	.	ID=gene-RM588_RS01410;Name=RM588_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01410;old_locus_tag=RM588_01410
NZ_JAVRJR010000001.1	Protein Homology	CDS	264508	264663	.	+	0	ID=cds-WP_165806095.1;Parent=gene-RM588_RS01410;Dbxref=GenBank:WP_165806095.1;Name=WP_165806095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165159.1;locus_tag=RM588_RS01410;product=hypothetical protein;protein_id=WP_165806095.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	264707	265720	.	-	.	ID=gene-RM588_RS01415;Name=RM588_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01415;old_locus_tag=RM588_01415
NZ_JAVRJR010000001.1	Protein Homology	CDS	264707	265720	.	-	0	ID=cds-WP_037574175.1;Parent=gene-RM588_RS01415;Dbxref=GenBank:WP_037574175.1;Name=WP_037574175.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425255.1;locus_tag=RM588_RS01415;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_037574175.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	265940	267088	.	+	.	ID=gene-RM588_RS01420;Name=RM588_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01420;old_locus_tag=RM588_01420
NZ_JAVRJR010000001.1	Protein Homology	CDS	265940	267088	.	+	0	ID=cds-WP_037574172.1;Parent=gene-RM588_RS01420;Dbxref=GenBank:WP_037574172.1;Name=WP_037574172.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471009.1;locus_tag=RM588_RS01420;product=cysteine desulfurase family protein;protein_id=WP_037574172.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	267085	268197	.	+	.	ID=gene-RM588_RS01425;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=RM588_RS01425;old_locus_tag=RM588_01425
NZ_JAVRJR010000001.1	Protein Homology	CDS	267085	268197	.	+	0	ID=cds-WP_037574167.1;Parent=gene-RM588_RS01425;Dbxref=GenBank:WP_037574167.1;Name=WP_037574167.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=RM588_RS01425;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_037574167.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	268220	268894	.	+	.	ID=gene-RM588_RS01430;Name=RM588_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01430;old_locus_tag=RM588_01430
NZ_JAVRJR010000001.1	Protein Homology	CDS	268220	268894	.	+	0	ID=cds-WP_037574164.1;Parent=gene-RM588_RS01430;Dbxref=GenBank:WP_037574164.1;Name=WP_037574164.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165163.1;locus_tag=RM588_RS01430;product=tetratricopeptide repeat protein;protein_id=WP_037574164.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	268897	271278	.	+	.	ID=gene-RM588_RS01435;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=RM588_RS01435;old_locus_tag=RM588_01435
NZ_JAVRJR010000001.1	Protein Homology	CDS	268897	271278	.	+	0	ID=cds-WP_107360523.1;Parent=gene-RM588_RS01435;Dbxref=GenBank:WP_107360523.1;Name=WP_107360523.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176477.1;locus_tag=RM588_RS01435;product=SF1B family DNA helicase RecD2;protein_id=WP_107360523.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	271504	274134	.	+	.	ID=gene-RM588_RS01440;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=RM588_RS01440;old_locus_tag=RM588_01440
NZ_JAVRJR010000001.1	Protein Homology	CDS	271504	274134	.	+	0	ID=cds-WP_119512821.1;Parent=gene-RM588_RS01440;Dbxref=GenBank:WP_119512821.1;Name=WP_119512821.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=RM588_RS01440;product=alanine--tRNA ligase;protein_id=WP_119512821.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	274196	274468	.	+	.	ID=gene-RM588_RS01445;Name=RM588_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01445;old_locus_tag=RM588_01445
NZ_JAVRJR010000001.1	Protein Homology	CDS	274196	274468	.	+	0	ID=cds-WP_037574156.1;Parent=gene-RM588_RS01445;Dbxref=GenBank:WP_037574156.1;Name=WP_037574156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613743.1;locus_tag=RM588_RS01445;product=IreB family regulatory phosphoprotein;protein_id=WP_037574156.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	274461	274889	.	+	.	ID=gene-RM588_RS01450;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=RM588_RS01450;old_locus_tag=RM588_01450
NZ_JAVRJR010000001.1	Protein Homology	CDS	274461	274889	.	+	0	ID=cds-WP_037574153.1;Parent=gene-RM588_RS01450;Dbxref=GenBank:WP_037574153.1;Name=WP_037574153.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500229.1;locus_tag=RM588_RS01450;product=Holliday junction resolvase RuvX;protein_id=WP_037574153.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	274904	275218	.	+	.	ID=gene-RM588_RS01455;Name=RM588_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01455;old_locus_tag=RM588_01455
NZ_JAVRJR010000001.1	Protein Homology	CDS	274904	275218	.	+	0	ID=cds-WP_037574148.1;Parent=gene-RM588_RS01455;Dbxref=GenBank:WP_037574148.1;Name=WP_037574148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613745.1;locus_tag=RM588_RS01455;product=DUF1292 domain-containing protein;protein_id=WP_037574148.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	275599	276243	.	+	.	ID=gene-RM588_RS01460;Name=RM588_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01460;old_locus_tag=RM588_01460
NZ_JAVRJR010000001.1	Protein Homology	CDS	275599	276243	.	+	0	ID=cds-WP_037574145.1;Parent=gene-RM588_RS01460;Dbxref=GenBank:WP_037574145.1;Name=WP_037574145.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613747.1;locus_tag=RM588_RS01460;product=O-methyltransferase;protein_id=WP_037574145.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	276236	277165	.	+	.	ID=gene-RM588_RS01465;Name=RM588_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01465;old_locus_tag=RM588_01465
NZ_JAVRJR010000001.1	Protein Homology	CDS	276236	277165	.	+	0	ID=cds-WP_311548050.1;Parent=gene-RM588_RS01465;Dbxref=GenBank:WP_311548050.1;Name=WP_311548050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=RM588_RS01465;product=peptidase U32 family protein;protein_id=WP_311548050.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	277202	278467	.	+	.	ID=gene-RM588_RS01470;Name=RM588_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01470;old_locus_tag=RM588_01470
NZ_JAVRJR010000001.1	Protein Homology	CDS	277202	278467	.	+	0	ID=cds-WP_037574139.1;Parent=gene-RM588_RS01470;Dbxref=GenBank:WP_037574139.1;Name=WP_037574139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471048.1;locus_tag=RM588_RS01470;product=peptidase U32 family protein;protein_id=WP_037574139.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	278471	279097	.	+	.	ID=gene-RM588_RS01475;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=RM588_RS01475;old_locus_tag=RM588_01475
NZ_JAVRJR010000001.1	Protein Homology	CDS	278471	279097	.	+	0	ID=cds-WP_037574136.1;Parent=gene-RM588_RS01475;Dbxref=GenBank:WP_037574136.1;Name=WP_037574136.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458952.1;locus_tag=RM588_RS01475;product=uridine kinase;protein_id=WP_037574136.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	279124	279600	.	+	.	ID=gene-RM588_RS01480;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=RM588_RS01480;old_locus_tag=RM588_01480
NZ_JAVRJR010000001.1	Protein Homology	CDS	279124	279600	.	+	0	ID=cds-WP_105965429.1;Parent=gene-RM588_RS01480;Dbxref=GenBank:WP_105965429.1;Name=WP_105965429.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=RM588_RS01480;product=transcription elongation factor GreA;protein_id=WP_105965429.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	279838	280569	.	+	.	ID=gene-RM588_RS01485;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=RM588_RS01485;old_locus_tag=RM588_01485
NZ_JAVRJR010000001.1	Protein Homology	CDS	279838	280569	.	+	0	ID=cds-WP_037574130.1;Parent=gene-RM588_RS01485;Dbxref=GenBank:WP_037574130.1;Name=WP_037574130.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613752.1;locus_tag=RM588_RS01485;product=5-oxoprolinase subunit PxpB;protein_id=WP_037574130.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	280559	281584	.	+	.	ID=gene-RM588_RS01490;Name=RM588_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01490;old_locus_tag=RM588_01490
NZ_JAVRJR010000001.1	Protein Homology	CDS	280559	281584	.	+	0	ID=cds-WP_311539699.1;Parent=gene-RM588_RS01490;Dbxref=GenBank:WP_311539699.1;Name=WP_311539699.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613753.1;locus_tag=RM588_RS01490;product=5-oxoprolinase subunit C family protein;protein_id=WP_311539699.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	281575	282021	.	+	.	ID=gene-RM588_RS01495;Name=RM588_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01495;old_locus_tag=RM588_01495
NZ_JAVRJR010000001.1	Protein Homology	CDS	281575	282021	.	+	0	ID=cds-WP_103159032.1;Parent=gene-RM588_RS01495;Dbxref=GenBank:WP_103159032.1;Name=WP_103159032.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425239.1;locus_tag=RM588_RS01495;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_103159032.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	282033	283397	.	+	.	ID=gene-RM588_RS01500;Name=RM588_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01500;old_locus_tag=RM588_01500
NZ_JAVRJR010000001.1	Protein Homology	CDS	282033	283397	.	+	0	ID=cds-WP_037574120.1;Parent=gene-RM588_RS01500;Dbxref=GenBank:WP_037574120.1;Name=WP_037574120.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613755.1;locus_tag=RM588_RS01500;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_037574120.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	283390	284151	.	+	.	ID=gene-RM588_RS01505;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=RM588_RS01505;old_locus_tag=RM588_01505
NZ_JAVRJR010000001.1	Protein Homology	CDS	283390	284151	.	+	0	ID=cds-WP_037574117.1;Parent=gene-RM588_RS01505;Dbxref=GenBank:WP_037574117.1;Name=WP_037574117.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382620.1;locus_tag=RM588_RS01505;product=5-oxoprolinase subunit PxpA;protein_id=WP_037574117.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	284155	285393	.	+	.	ID=gene-RM588_RS01510;Name=RM588_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01510;old_locus_tag=RM588_01510
NZ_JAVRJR010000001.1	Protein Homology	CDS	284155	285393	.	+	0	ID=cds-WP_037574114.1;Parent=gene-RM588_RS01510;Dbxref=GenBank:WP_037574114.1;Name=WP_037574114.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165175.1;locus_tag=RM588_RS01510;product=NRAMP family divalent metal transporter;protein_id=WP_037574114.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	285678	286370	.	+	.	ID=gene-RM588_RS01515;Name=RM588_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01515;old_locus_tag=RM588_01515
NZ_JAVRJR010000001.1	Protein Homology	CDS	285678	286370	.	+	0	ID=cds-WP_037574111.1;Parent=gene-RM588_RS01515;Dbxref=GenBank:WP_037574111.1;Name=WP_037574111.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471057.1;locus_tag=RM588_RS01515;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_037574111.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	286437	286967	.	+	.	ID=gene-RM588_RS01520;Name=RM588_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01520;old_locus_tag=RM588_01520
NZ_JAVRJR010000001.1	Protein Homology	CDS	286437	286967	.	+	0	ID=cds-WP_037574108.1;Parent=gene-RM588_RS01520;Dbxref=GenBank:WP_037574108.1;Name=WP_037574108.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613759.1;locus_tag=RM588_RS01520;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_037574108.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	286964	288064	.	+	.	ID=gene-RM588_RS01525;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=RM588_RS01525;old_locus_tag=RM588_01525
NZ_JAVRJR010000001.1	Protein Homology	CDS	286964	288064	.	+	0	ID=cds-WP_107366188.1;Parent=gene-RM588_RS01525;Dbxref=GenBank:WP_107366188.1;Name=WP_107366188.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280135.1;locus_tag=RM588_RS01525;product=ribosome biogenesis GTPase YqeH;protein_id=WP_107366188.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	288078	288890	.	+	.	ID=gene-RM588_RS01530;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=RM588_RS01530;old_locus_tag=RM588_01530
NZ_JAVRJR010000001.1	Protein Homology	CDS	288078	288890	.	+	0	ID=cds-WP_107366187.1;Parent=gene-RM588_RS01530;Dbxref=GenBank:WP_107366187.1;Name=WP_107366187.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425232.1;locus_tag=RM588_RS01530;product=shikimate dehydrogenase;protein_id=WP_107366187.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	288900	289196	.	+	.	ID=gene-RM588_RS01535;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=RM588_RS01535;old_locus_tag=RM588_01535
NZ_JAVRJR010000001.1	Protein Homology	CDS	288900	289196	.	+	0	ID=cds-WP_037574099.1;Parent=gene-RM588_RS01535;Dbxref=GenBank:WP_037574099.1;Name=WP_037574099.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440113.1;locus_tag=RM588_RS01535;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_037574099.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	289196	289762	.	+	.	ID=gene-RM588_RS01540;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=RM588_RS01540;old_locus_tag=RM588_01540
NZ_JAVRJR010000001.1	Protein Homology	CDS	289196	289762	.	+	0	ID=cds-WP_037574096.1;Parent=gene-RM588_RS01540;Dbxref=GenBank:WP_037574096.1;Name=WP_037574096.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613763.1;locus_tag=RM588_RS01540;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_037574096.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	289755	290327	.	+	.	ID=gene-RM588_RS01545;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=RM588_RS01545;old_locus_tag=RM588_01545
NZ_JAVRJR010000001.1	Protein Homology	CDS	289755	290327	.	+	0	ID=cds-WP_037574093.1;Parent=gene-RM588_RS01545;Dbxref=GenBank:WP_037574093.1;Name=WP_037574093.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369462.1;locus_tag=RM588_RS01545;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_037574093.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	290340	290696	.	+	.	ID=gene-RM588_RS01550;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=RM588_RS01550;old_locus_tag=RM588_01550
NZ_JAVRJR010000001.1	Protein Homology	CDS	290340	290696	.	+	0	ID=cds-WP_103158624.1;Parent=gene-RM588_RS01550;Dbxref=GenBank:WP_103158624.1;Name=WP_103158624.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613765.1;locus_tag=RM588_RS01550;product=ribosome silencing factor;protein_id=WP_103158624.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	290696	291418	.	+	.	ID=gene-RM588_RS01555;Name=RM588_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01555;old_locus_tag=RM588_01555
NZ_JAVRJR010000001.1	Protein Homology	CDS	290696	291418	.	+	0	ID=cds-WP_311540556.1;Parent=gene-RM588_RS01555;Dbxref=GenBank:WP_311540556.1;Name=WP_311540556.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169730.1;locus_tag=RM588_RS01555;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_311540556.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	291467	292105	.	+	.	ID=gene-RM588_RS01560;Name=RM588_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01560;old_locus_tag=RM588_01560
NZ_JAVRJR010000001.1	Protein Homology	CDS	291467	292105	.	+	0	ID=cds-WP_311540557.1;Parent=gene-RM588_RS01560;Dbxref=GenBank:WP_311540557.1;Name=WP_311540557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382608.1;locus_tag=RM588_RS01560;product=helix-hairpin-helix domain-containing protein;protein_id=WP_311540557.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	292188	292649	.	+	.	ID=gene-RM588_RS01565;Name=RM588_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01565;old_locus_tag=RM588_01565
NZ_JAVRJR010000001.1	Protein Homology	CDS	292188	292649	.	+	0	ID=cds-WP_037574083.1;Parent=gene-RM588_RS01565;Dbxref=GenBank:WP_037574083.1;Name=WP_037574083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458970.1;locus_tag=RM588_RS01565;product=ComE operon protein 2;protein_id=WP_037574083.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	292782	294875	.	+	.	ID=gene-RM588_RS01570;Name=RM588_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01570;old_locus_tag=RM588_01570
NZ_JAVRJR010000001.1	Protein Homology	CDS	292782	294875	.	+	0	ID=cds-WP_311548051.1;Parent=gene-RM588_RS01570;Dbxref=GenBank:WP_311548051.1;Name=WP_311548051.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=RM588_RS01570;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_311548051.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	294972	295949	.	+	.	ID=gene-RM588_RS01575;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=RM588_RS01575;old_locus_tag=RM588_01575
NZ_JAVRJR010000001.1	Protein Homology	CDS	294972	295949	.	+	0	ID=cds-WP_105965439.1;Parent=gene-RM588_RS01575;Dbxref=GenBank:WP_105965439.1;Name=WP_105965439.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836898.1;locus_tag=RM588_RS01575;product=DNA polymerase III subunit delta;protein_id=WP_105965439.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	295976	296224	.	-	.	ID=gene-RM588_RS01580;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=RM588_RS01580;old_locus_tag=RM588_01580
NZ_JAVRJR010000001.1	Protein Homology	CDS	295976	296224	.	-	0	ID=cds-WP_037574074.1;Parent=gene-RM588_RS01580;Dbxref=GenBank:WP_037574074.1;Name=WP_037574074.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613771.1;locus_tag=RM588_RS01580;product=30S ribosomal protein S20;protein_id=WP_037574074.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	296466	298289	.	+	.	ID=gene-RM588_RS01585;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=RM588_RS01585;old_locus_tag=RM588_01585
NZ_JAVRJR010000001.1	Protein Homology	CDS	296466	298289	.	+	0	ID=cds-WP_037574071.1;Parent=gene-RM588_RS01585;Dbxref=GenBank:WP_037574071.1;Name=WP_037574071.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=RM588_RS01585;product=translation elongation factor 4;protein_id=WP_037574071.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	298351	299472	.	+	.	ID=gene-RM588_RS01590;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=RM588_RS01590;old_locus_tag=RM588_01590
NZ_JAVRJR010000001.1	Protein Homology	CDS	298351	299472	.	+	0	ID=cds-WP_037574619.1;Parent=gene-RM588_RS01590;Dbxref=GenBank:WP_037574619.1;Name=WP_037574619.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165189.1;locus_tag=RM588_RS01590;product=radical SAM family heme chaperone HemW;protein_id=WP_037574619.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	299572	300555	.	+	.	ID=gene-RM588_RS01595;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=RM588_RS01595;old_locus_tag=RM588_01595
NZ_JAVRJR010000001.1	Protein Homology	CDS	299572	300555	.	+	0	ID=cds-WP_037574068.1;Parent=gene-RM588_RS01595;Dbxref=GenBank:WP_037574068.1;Name=WP_037574068.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219757.1;locus_tag=RM588_RS01595;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_037574068.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	300594	301199	.	+	.	ID=gene-RM588_RS01600;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=RM588_RS01600;old_locus_tag=RM588_01600
NZ_JAVRJR010000001.1	Protein Homology	CDS	300594	301199	.	+	0	ID=cds-WP_037574065.1;Parent=gene-RM588_RS01600;Dbxref=GenBank:WP_037574065.1;Name=WP_037574065.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182226.1;locus_tag=RM588_RS01600;product=nucleotide exchange factor GrpE;protein_id=WP_037574065.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	301263	303095	.	+	.	ID=gene-RM588_RS01605;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=RM588_RS01605;old_locus_tag=RM588_01605
NZ_JAVRJR010000001.1	Protein Homology	CDS	301263	303095	.	+	0	ID=cds-WP_037574062.1;Parent=gene-RM588_RS01605;Dbxref=GenBank:WP_037574062.1;Name=WP_037574062.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500193.1;locus_tag=RM588_RS01605;product=molecular chaperone DnaK;protein_id=WP_037574062.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	303211	304341	.	+	.	ID=gene-RM588_RS01610;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=RM588_RS01610;old_locus_tag=RM588_01610
NZ_JAVRJR010000001.1	Protein Homology	CDS	303211	304341	.	+	0	ID=cds-WP_107367471.1;Parent=gene-RM588_RS01610;Dbxref=GenBank:WP_107367471.1;Name=WP_107367471.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=RM588_RS01610;product=molecular chaperone DnaJ;protein_id=WP_107367471.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	304345	305274	.	+	.	ID=gene-RM588_RS01615;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=RM588_RS01615;old_locus_tag=RM588_01615
NZ_JAVRJR010000001.1	Protein Homology	CDS	304345	305274	.	+	0	ID=cds-WP_105965444.1;Parent=gene-RM588_RS01615;Dbxref=GenBank:WP_105965444.1;Name=WP_105965444.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831256.1;locus_tag=RM588_RS01615;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_105965444.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	305280	306029	.	+	.	ID=gene-RM588_RS01620;Name=RM588_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01620;old_locus_tag=RM588_01620
NZ_JAVRJR010000001.1	Protein Homology	CDS	305280	306029	.	+	0	ID=cds-WP_107363423.1;Parent=gene-RM588_RS01620;Dbxref=GenBank:WP_107363423.1;Name=WP_107363423.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=RM588_RS01620;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_107363423.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	306048	307394	.	+	.	ID=gene-RM588_RS01625;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=RM588_RS01625;old_locus_tag=RM588_01625
NZ_JAVRJR010000001.1	Protein Homology	CDS	306048	307394	.	+	0	ID=cds-WP_037574053.1;Parent=gene-RM588_RS01625;Dbxref=GenBank:WP_037574053.1;Name=WP_037574053.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=RM588_RS01625;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_037574053.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	307525	307701	.	+	.	ID=gene-RM588_RS01630;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=RM588_RS01630;old_locus_tag=RM588_01630
NZ_JAVRJR010000001.1	Protein Homology	CDS	307525	307701	.	+	0	ID=cds-WP_002471046.1;Parent=gene-RM588_RS01630;Dbxref=GenBank:WP_002471046.1;Name=WP_002471046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=RM588_RS01630;product=30S ribosomal protein S21;protein_id=WP_002471046.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	307895	308602	.	+	.	ID=gene-RM588_RS01635;Name=RM588_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01635;old_locus_tag=RM588_01635
NZ_JAVRJR010000001.1	Protein Homology	CDS	307895	308602	.	+	0	ID=cds-WP_037574050.1;Parent=gene-RM588_RS01635;Dbxref=GenBank:WP_037574050.1;Name=WP_037574050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275638.1;locus_tag=RM588_RS01635;product=NfeD family protein;protein_id=WP_037574050.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	308615	309613	.	+	.	ID=gene-RM588_RS01640;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=RM588_RS01640;old_locus_tag=RM588_01640
NZ_JAVRJR010000001.1	Protein Homology	CDS	308615	309613	.	+	0	ID=cds-WP_037574047.1;Parent=gene-RM588_RS01640;Dbxref=GenBank:WP_037574047.1;Name=WP_037574047.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425210.1;locus_tag=RM588_RS01640;product=flotillin-like protein FloA;protein_id=WP_037574047.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	309626	310243	.	+	.	ID=gene-RM588_RS01645;Name=RM588_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01645;old_locus_tag=RM588_01645
NZ_JAVRJR010000001.1	Protein Homology	CDS	309626	310243	.	+	0	ID=cds-WP_037574045.1;Parent=gene-RM588_RS01645;Dbxref=GenBank:WP_037574045.1;Name=WP_037574045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425209.1;locus_tag=RM588_RS01645;product=hypothetical protein;protein_id=WP_037574045.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	310590	311537	.	+	.	ID=gene-RM588_RS01650;Name=RM588_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01650;old_locus_tag=RM588_01650
NZ_JAVRJR010000001.1	Protein Homology	CDS	310590	311537	.	+	0	ID=cds-WP_037574043.1;Parent=gene-RM588_RS01650;Dbxref=GenBank:WP_037574043.1;Name=WP_037574043.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500184.1;locus_tag=RM588_RS01650;product=PhoH family protein;protein_id=WP_037574043.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	311537	312001	.	+	.	ID=gene-RM588_RS01655;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=RM588_RS01655;old_locus_tag=RM588_01655
NZ_JAVRJR010000001.1	Protein Homology	CDS	311537	312001	.	+	0	ID=cds-WP_037574040.1;Parent=gene-RM588_RS01655;Dbxref=GenBank:WP_037574040.1;Name=WP_037574040.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510508.1;locus_tag=RM588_RS01655;product=rRNA maturation RNase YbeY;protein_id=WP_037574040.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	312001	312336	.	+	.	ID=gene-RM588_RS01660;Name=RM588_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01660;old_locus_tag=RM588_01660
NZ_JAVRJR010000001.1	Protein Homology	CDS	312001	312336	.	+	0	ID=cds-WP_229717290.1;Parent=gene-RM588_RS01660;Dbxref=GenBank:WP_229717290.1;Name=WP_229717290.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507479.1;locus_tag=RM588_RS01660;product=diacylglycerol kinase family protein;protein_id=WP_229717290.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	312351	312755	.	+	.	ID=gene-RM588_RS01665;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=RM588_RS01665;old_locus_tag=RM588_01665
NZ_JAVRJR010000001.1	Protein Homology	CDS	312351	312755	.	+	0	ID=cds-WP_037574034.1;Parent=gene-RM588_RS01665;Dbxref=GenBank:WP_037574034.1;Name=WP_037574034.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500181.1;locus_tag=RM588_RS01665;product=cytidine deaminase;protein_id=WP_037574034.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	312757	313653	.	+	.	ID=gene-RM588_RS01670;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=RM588_RS01670;old_locus_tag=RM588_01670
NZ_JAVRJR010000001.1	Protein Homology	CDS	312757	313653	.	+	0	ID=cds-WP_311548052.1;Parent=gene-RM588_RS01670;Dbxref=GenBank:WP_311548052.1;Name=WP_311548052.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613789.1;locus_tag=RM588_RS01670;product=GTPase Era;protein_id=WP_311548052.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	313676	314449	.	+	.	ID=gene-RM588_RS01675;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=RM588_RS01675;old_locus_tag=RM588_01675
NZ_JAVRJR010000001.1	Protein Homology	CDS	313676	314449	.	+	0	ID=cds-WP_037574029.1;Parent=gene-RM588_RS01675;Dbxref=GenBank:WP_037574029.1;Name=WP_037574029.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729246.1;locus_tag=RM588_RS01675;product=DNA repair protein RecO;protein_id=WP_037574029.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	314539	315930	.	-	.	ID=gene-RM588_RS01680;Name=RM588_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01680;old_locus_tag=RM588_01680
NZ_JAVRJR010000001.1	Protein Homology	CDS	314539	315930	.	-	0	ID=cds-WP_037574027.1;Parent=gene-RM588_RS01680;Dbxref=GenBank:WP_037574027.1;Name=WP_037574027.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=RM588_RS01680;product=glycine--tRNA ligase;protein_id=WP_037574027.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	316351	316974	.	+	.	ID=gene-RM588_RS01685;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=RM588_RS01685;old_locus_tag=RM588_01685
NZ_JAVRJR010000001.1	Protein Homology	CDS	316351	316974	.	+	0	ID=cds-WP_103158618.1;Parent=gene-RM588_RS01685;Dbxref=GenBank:WP_103158618.1;Name=WP_103158618.1;Ontology_term=GO:0045013,GO:0003677;gbkey=CDS;gene=ccpN;go_function=DNA binding|0003677||IEA;go_process=carbon catabolite repression of transcription|0045013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=RM588_RS01685;product=transcriptional regulator CcpN;protein_id=WP_103158618.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	316990	317814	.	+	.	ID=gene-RM588_RS01690;Name=RM588_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01690;old_locus_tag=RM588_01690
NZ_JAVRJR010000001.1	Protein Homology	CDS	316990	317814	.	+	0	ID=cds-WP_037574022.1;Parent=gene-RM588_RS01690;Dbxref=GenBank:WP_037574022.1;Name=WP_037574022.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613793.1;locus_tag=RM588_RS01690;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_037574022.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	317886	319670	.	+	.	ID=gene-RM588_RS01695;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=RM588_RS01695;old_locus_tag=RM588_01695
NZ_JAVRJR010000001.1	Protein Homology	CDS	317886	319670	.	+	0	ID=cds-WP_037574019.1;Parent=gene-RM588_RS01695;Dbxref=GenBank:WP_037574019.1;Name=WP_037574019.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900432.1;locus_tag=RM588_RS01695;product=DNA primase;protein_id=WP_037574019.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	319688	320797	.	+	.	ID=gene-RM588_RS01700;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=RM588_RS01700;old_locus_tag=RM588_01700
NZ_JAVRJR010000001.1	Protein Homology	CDS	319688	320797	.	+	0	ID=cds-WP_019165210.1;Parent=gene-RM588_RS01700;Dbxref=GenBank:WP_019165210.1;Name=WP_019165210.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=RM588_RS01700;product=RNA polymerase sigma factor RpoD;protein_id=WP_019165210.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	320960	321637	.	+	.	ID=gene-RM588_RS01705;Name=RM588_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01705;old_locus_tag=RM588_01705
NZ_JAVRJR010000001.1	Protein Homology	CDS	320960	321637	.	+	0	ID=cds-WP_037574016.1;Parent=gene-RM588_RS01705;Dbxref=GenBank:WP_037574016.1;Name=WP_037574016.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613796.1;locus_tag=RM588_RS01705;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_037574016.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	321634	322734	.	+	.	ID=gene-RM588_RS01710;Name=RM588_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01710;old_locus_tag=RM588_01710
NZ_JAVRJR010000001.1	Protein Homology	CDS	321634	322734	.	+	0	ID=cds-WP_037574012.1;Parent=gene-RM588_RS01710;Dbxref=GenBank:WP_037574012.1;Name=WP_037574012.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472473.1;locus_tag=RM588_RS01710;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_037574012.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	322880	323848	.	-	.	ID=gene-RM588_RS01715;Name=RM588_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01715;old_locus_tag=RM588_01715
NZ_JAVRJR010000001.1	Protein Homology	CDS	322880	323848	.	-	0	ID=cds-WP_037574009.1;Parent=gene-RM588_RS01715;Dbxref=GenBank:WP_037574009.1;Name=WP_037574009.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168667.1;locus_tag=RM588_RS01715;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_037574009.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	324035	325375	.	+	.	ID=gene-RM588_RS01720;Name=RM588_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01720;old_locus_tag=RM588_01720
NZ_JAVRJR010000001.1	Protein Homology	CDS	324035	325375	.	+	0	ID=cds-WP_311548053.1;Parent=gene-RM588_RS01720;Dbxref=GenBank:WP_311548053.1;Name=WP_311548053.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425193.1;locus_tag=RM588_RS01720;product=DEAD/DEAH box helicase;protein_id=WP_311548053.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	325389	326279	.	+	.	ID=gene-RM588_RS01725;Name=RM588_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01725;old_locus_tag=RM588_01725
NZ_JAVRJR010000001.1	Protein Homology	CDS	325389	326279	.	+	0	ID=cds-WP_103158625.1;Parent=gene-RM588_RS01725;Dbxref=GenBank:WP_103158625.1;Name=WP_103158625.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425192.1;locus_tag=RM588_RS01725;product=deoxyribonuclease IV;protein_id=WP_103158625.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	326417	327187	.	+	.	ID=gene-RM588_RS01730;Name=RM588_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01730;old_locus_tag=RM588_01730
NZ_JAVRJR010000001.1	Protein Homology	CDS	326417	327187	.	+	0	ID=cds-WP_037574004.1;Parent=gene-RM588_RS01730;Dbxref=GenBank:WP_037574004.1;Name=WP_037574004.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455284.1;locus_tag=RM588_RS01730;product=metal ABC transporter ATP-binding protein;protein_id=WP_037574004.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	327184	328035	.	+	.	ID=gene-RM588_RS01735;Name=RM588_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01735;old_locus_tag=RM588_01735
NZ_JAVRJR010000001.1	Protein Homology	CDS	327184	328035	.	+	0	ID=cds-WP_037574001.1;Parent=gene-RM588_RS01735;Dbxref=GenBank:WP_037574001.1;Name=WP_037574001.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613802.1;locus_tag=RM588_RS01735;product=metal ABC transporter permease;protein_id=WP_037574001.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	328036	328446	.	+	.	ID=gene-RM588_RS01740;Name=RM588_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01740;old_locus_tag=RM588_01740
NZ_JAVRJR010000001.1	Protein Homology	CDS	328036	328446	.	+	0	ID=cds-WP_311548054.1;Parent=gene-RM588_RS01740;Dbxref=GenBank:WP_311548054.1;Name=WP_311548054.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500166.1;locus_tag=RM588_RS01740;product=Fur family transcriptional regulator;protein_id=WP_311548054.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	328479	329579	.	-	.	ID=gene-RM588_RS01745;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=RM588_RS01745;old_locus_tag=RM588_01745
NZ_JAVRJR010000001.1	Protein Homology	CDS	328479	329579	.	-	0	ID=cds-WP_037573940.1;Parent=gene-RM588_RS01745;Dbxref=GenBank:WP_037573940.1;Name=WP_037573940.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425188.1;locus_tag=RM588_RS01745;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_037573940.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	329908	330507	.	+	.	ID=gene-RM588_RS01750;Name=RM588_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01750;old_locus_tag=RM588_01750
NZ_JAVRJR010000001.1	Protein Homology	CDS	329908	330507	.	+	0	ID=cds-WP_037573937.1;Parent=gene-RM588_RS01750;Dbxref=GenBank:WP_037573937.1;Name=WP_037573937.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=RM588_RS01750;product=superoxide dismutase;protein_id=WP_037573937.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	330733	332769	.	+	.	ID=gene-RM588_RS01755;Name=RM588_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01755;old_locus_tag=RM588_01755
NZ_JAVRJR010000001.1	Protein Homology	CDS	330733	332769	.	+	0	ID=cds-WP_037573935.1;Parent=gene-RM588_RS01755;Dbxref=GenBank:WP_037573935.1;Name=WP_037573935.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425186.1;locus_tag=RM588_RS01755;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_037573935.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	333040	334011	.	+	.	ID=gene-RM588_RS01760;Name=RM588_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01760;old_locus_tag=RM588_01760
NZ_JAVRJR010000001.1	Protein Homology	CDS	333040	334011	.	+	0	ID=cds-WP_311548055.1;Parent=gene-RM588_RS01760;Dbxref=GenBank:WP_311548055.1;Name=WP_311548055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425185.1;locus_tag=RM588_RS01760;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_311548055.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	334094	335020	.	+	.	ID=gene-RM588_RS01765;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=RM588_RS01765;old_locus_tag=RM588_01765
NZ_JAVRJR010000001.1	Protein Homology	CDS	334094	335020	.	+	0	ID=cds-WP_105965329.1;Parent=gene-RM588_RS01765;Dbxref=GenBank:WP_105965329.1;Name=WP_105965329.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453209.1;locus_tag=RM588_RS01765;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_105965329.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	335022	335900	.	+	.	ID=gene-RM588_RS01770;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=RM588_RS01770;old_locus_tag=RM588_01770
NZ_JAVRJR010000001.1	Protein Homology	CDS	335022	335900	.	+	0	ID=cds-WP_107366148.1;Parent=gene-RM588_RS01770;Dbxref=GenBank:WP_107366148.1;Name=WP_107366148.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168690.1;locus_tag=RM588_RS01770;product=phosphate ABC transporter permease PstA;protein_id=WP_107366148.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	335934	336806	.	+	.	ID=gene-RM588_RS01775;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=RM588_RS01775;old_locus_tag=RM588_01775
NZ_JAVRJR010000001.1	Protein Homology	CDS	335934	336806	.	+	0	ID=cds-WP_311541270.1;Parent=gene-RM588_RS01775;Dbxref=GenBank:WP_311541270.1;Name=WP_311541270.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165224.1;locus_tag=RM588_RS01775;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_311541270.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	336811	337458	.	+	.	ID=gene-RM588_RS01780;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=RM588_RS01780;old_locus_tag=RM588_01780
NZ_JAVRJR010000001.1	Protein Homology	CDS	336811	337458	.	+	0	ID=cds-WP_037573922.1;Parent=gene-RM588_RS01780;Dbxref=GenBank:WP_037573922.1;Name=WP_037573922.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468770.1;locus_tag=RM588_RS01780;product=phosphate signaling complex protein PhoU;protein_id=WP_037573922.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	337514	337678	.	+	.	ID=gene-RM588_RS01785;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM588_RS01785;old_locus_tag=RM588_01785
NZ_JAVRJR010000001.1	Protein Homology	CDS	337514	337678	.	+	0	ID=cds-WP_255201399.1;Parent=gene-RM588_RS01785;Dbxref=GenBank:WP_255201399.1;Name=WP_255201399.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM588_RS01785;product=50S ribosomal protein L33;protein_id=WP_255201399.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	337874	338413	.	+	.	ID=gene-RM588_RS01790;Name=RM588_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01790;old_locus_tag=RM588_01790
NZ_JAVRJR010000001.1	Protein Homology	CDS	337874	338413	.	+	0	ID=cds-WP_037573917.1;Parent=gene-RM588_RS01790;Dbxref=GenBank:WP_037573917.1;Name=WP_037573917.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382545.1;locus_tag=RM588_RS01790;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_037573917.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	338431	339870	.	+	.	ID=gene-RM588_RS01795;Name=RM588_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01795;old_locus_tag=RM588_01795
NZ_JAVRJR010000001.1	Protein Homology	CDS	338431	339870	.	+	0	ID=cds-WP_311548056.1;Parent=gene-RM588_RS01795;Dbxref=GenBank:WP_311548056.1;Name=WP_311548056.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165226.1;locus_tag=RM588_RS01795;product=rhomboid family intramembrane serine protease;protein_id=WP_311548056.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	339872	340075	.	+	.	ID=gene-RM588_RS01800;Name=RM588_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01800;old_locus_tag=RM588_01800
NZ_JAVRJR010000001.1	Protein Homology	CDS	339872	340075	.	+	0	ID=cds-WP_037573910.1;Parent=gene-RM588_RS01800;Dbxref=GenBank:WP_037573910.1;Name=WP_037573910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613816.1;locus_tag=RM588_RS01800;product=YqgQ family protein;protein_id=WP_037573910.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	340072	341058	.	+	.	ID=gene-RM588_RS01805;Name=RM588_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01805;old_locus_tag=RM588_01805
NZ_JAVRJR010000001.1	Protein Homology	CDS	340072	341058	.	+	0	ID=cds-WP_037573907.1;Parent=gene-RM588_RS01805;Dbxref=GenBank:WP_037573907.1;Name=WP_037573907.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168696.1;locus_tag=RM588_RS01805;product=ROK family glucokinase;protein_id=WP_037573907.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	341059	341370	.	+	.	ID=gene-RM588_RS01810;Name=RM588_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01810;old_locus_tag=RM588_01810
NZ_JAVRJR010000001.1	Protein Homology	CDS	341059	341370	.	+	0	ID=cds-WP_037573905.1;Parent=gene-RM588_RS01810;Dbxref=GenBank:WP_037573905.1;Name=WP_037573905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433945.1;locus_tag=RM588_RS01810;product=MTH1187 family thiamine-binding protein;protein_id=WP_037573905.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	341384	342007	.	+	.	ID=gene-RM588_RS01815;Name=RM588_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01815;old_locus_tag=RM588_01815
NZ_JAVRJR010000001.1	Protein Homology	CDS	341384	342007	.	+	0	ID=cds-WP_037573902.1;Parent=gene-RM588_RS01815;Dbxref=GenBank:WP_037573902.1;Name=WP_037573902.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558017.1;locus_tag=RM588_RS01815;product=MBL fold metallo-hydrolase;protein_id=WP_037573902.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	342060	343034	.	+	.	ID=gene-RM588_RS01820;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=RM588_RS01820;old_locus_tag=RM588_01820
NZ_JAVRJR010000001.1	Protein Homology	CDS	342060	343034	.	+	0	ID=cds-WP_037573899.1;Parent=gene-RM588_RS01820;Dbxref=GenBank:WP_037573899.1;Name=WP_037573899.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=RM588_RS01820;product=competence type IV pilus ATPase ComGA;protein_id=WP_037573899.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	343003	344070	.	+	.	ID=gene-RM588_RS01825;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=RM588_RS01825;old_locus_tag=RM588_01825
NZ_JAVRJR010000001.1	Protein Homology	CDS	343003	344070	.	+	0	ID=cds-WP_103158615.1;Parent=gene-RM588_RS01825;Dbxref=GenBank:WP_103158615.1;Name=WP_103158615.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729166.1;locus_tag=RM588_RS01825;product=competence type IV pilus assembly protein ComGB;protein_id=WP_103158615.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	344085	344402	.	+	.	ID=gene-RM588_RS01830;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=RM588_RS01830;old_locus_tag=RM588_01830
NZ_JAVRJR010000001.1	Protein Homology	CDS	344085	344402	.	+	0	ID=cds-WP_037573894.1;Parent=gene-RM588_RS01830;Dbxref=GenBank:WP_037573894.1;Name=WP_037573894.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464660.1;locus_tag=RM588_RS01830;product=competence type IV pilus major pilin ComGC;protein_id=WP_037573894.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	344392	344823	.	+	.	ID=gene-RM588_RS01835;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=RM588_RS01835;old_locus_tag=RM588_01835
NZ_JAVRJR010000001.1	Protein Homology	CDS	344392	344823	.	+	0	ID=cds-WP_051604961.1;Parent=gene-RM588_RS01835;Dbxref=GenBank:WP_051604961.1;Name=WP_051604961.1;gbkey=CDS;gene=comGD;inference=COORDINATES: protein motif:HMM:NF040982.1;locus_tag=RM588_RS01835;product=competence type IV pilus minor pilin ComGD;protein_id=WP_051604961.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	344928	345110	.	+	.	ID=gene-RM588_RS01840;Name=RM588_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01840;old_locus_tag=RM588_01840
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	344928	345110	.	+	0	ID=cds-WP_133172104.1;Parent=gene-RM588_RS01840;Dbxref=GenBank:WP_133172104.1;Name=WP_133172104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS01840;product=hypothetical protein;protein_id=WP_133172104.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	345127	345501	.	+	.	ID=gene-RM588_RS01845;Name=RM588_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01845;old_locus_tag=RM588_01845
NZ_JAVRJR010000001.1	Protein Homology	CDS	345127	345501	.	+	0	ID=cds-WP_107374195.1;Parent=gene-RM588_RS01845;Dbxref=GenBank:WP_107374195.1;Name=WP_107374195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027310.7;locus_tag=RM588_RS01845;product=competence type IV pilus minor pilin ComGF;protein_id=WP_107374195.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	345666	346190	.	+	.	ID=gene-RM588_RS01850;Name=RM588_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01850;old_locus_tag=RM588_01850
NZ_JAVRJR010000001.1	Protein Homology	CDS	345666	346190	.	+	0	ID=cds-WP_103159095.1;Parent=gene-RM588_RS01850;Dbxref=GenBank:WP_103159095.1;Name=WP_103159095.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469341.1;locus_tag=RM588_RS01850;product=shikimate kinase;protein_id=WP_103159095.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	riboswitch	346177	346270	.	+	.	ID=id-NZ_JAVRJR010000001.1:346177..346270;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00504,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000001.1	RefSeq	gene	346343	347434	.	+	.	ID=gene-RM588_RS01855;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=RM588_RS01855;old_locus_tag=RM588_01855
NZ_JAVRJR010000001.1	Protein Homology	CDS	346343	347434	.	+	0	ID=cds-WP_103159094.1;Parent=gene-RM588_RS01855;Dbxref=GenBank:WP_103159094.1;Name=WP_103159094.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=RM588_RS01855;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_103159094.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	347447	348796	.	+	.	ID=gene-RM588_RS01860;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=RM588_RS01860;old_locus_tag=RM588_01860
NZ_JAVRJR010000001.1	Protein Homology	CDS	347447	348796	.	+	0	ID=cds-WP_103159093.1;Parent=gene-RM588_RS01860;Dbxref=GenBank:WP_103159093.1;Name=WP_103159093.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465752.1;locus_tag=RM588_RS01860;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_103159093.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	348786	350261	.	+	.	ID=gene-RM588_RS01865;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=RM588_RS01865;old_locus_tag=RM588_01865
NZ_JAVRJR010000001.1	Protein Homology	CDS	348786	350261	.	+	0	ID=cds-WP_037573879.1;Parent=gene-RM588_RS01865;Dbxref=GenBank:WP_037573879.1;Name=WP_037573879.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382526.1;locus_tag=RM588_RS01865;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_037573879.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	350418	350804	.	-	.	ID=gene-RM588_RS01870;Name=RM588_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01870;old_locus_tag=RM588_01870
NZ_JAVRJR010000001.1	Protein Homology	CDS	350418	350804	.	-	0	ID=cds-WP_037573877.1;Parent=gene-RM588_RS01870;Dbxref=GenBank:WP_037573877.1;Name=WP_037573877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572316.1;locus_tag=RM588_RS01870;product=rhodanese-like domain-containing protein;protein_id=WP_037573877.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	350952	351782	.	+	.	ID=gene-RM588_RS01875;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=RM588_RS01875;old_locus_tag=RM588_01875
NZ_JAVRJR010000001.1	Protein Homology	CDS	350952	351782	.	+	0	ID=cds-WP_037573874.1;Parent=gene-RM588_RS01875;Dbxref=GenBank:WP_037573874.1;Name=WP_037573874.1;Ontology_term=GO:0009107,GO:0009249,GO:0036211,GO:0033819;gbkey=CDS;gene=lipM;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=RM588_RS01875;product=octanoyltransferase LipM;protein_id=WP_037573874.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	351832	352056	.	-	.	ID=gene-RM588_RS01880;Name=RM588_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01880;old_locus_tag=RM588_01880
NZ_JAVRJR010000001.1	Protein Homology	CDS	351832	352056	.	-	0	ID=cds-WP_037573873.1;Parent=gene-RM588_RS01880;Dbxref=GenBank:WP_037573873.1;Name=WP_037573873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425161.1;locus_tag=RM588_RS01880;product=SA1362 family protein;protein_id=WP_037573873.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	352068	352670	.	-	.	ID=gene-RM588_RS01885;Name=RM588_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01885;old_locus_tag=RM588_01885
NZ_JAVRJR010000001.1	Protein Homology	CDS	352068	352670	.	-	0	ID=cds-WP_037573870.1;Parent=gene-RM588_RS01885;Dbxref=GenBank:WP_037573870.1;Name=WP_037573870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425160.1;locus_tag=RM588_RS01885;product=hypothetical protein;protein_id=WP_037573870.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	352762	353823	.	+	.	ID=gene-RM588_RS01890;Name=RM588_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01890;old_locus_tag=RM588_01890
NZ_JAVRJR010000001.1	Protein Homology	CDS	352762	353823	.	+	0	ID=cds-WP_103159092.1;Parent=gene-RM588_RS01890;Dbxref=GenBank:WP_103159092.1;Name=WP_103159092.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425159.1;locus_tag=RM588_RS01890;product=M24 family metallopeptidase;protein_id=WP_103159092.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	353851	354408	.	+	.	ID=gene-RM588_RS01895;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=RM588_RS01895;old_locus_tag=RM588_01895
NZ_JAVRJR010000001.1	Protein Homology	CDS	353851	354408	.	+	0	ID=cds-WP_037573865.1;Parent=gene-RM588_RS01895;Dbxref=GenBank:WP_037573865.1;Name=WP_037573865.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275683.1;locus_tag=RM588_RS01895;product=elongation factor P;protein_id=WP_037573865.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	354624	355082	.	+	.	ID=gene-RM588_RS01900;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=RM588_RS01900;old_locus_tag=RM588_01900
NZ_JAVRJR010000001.1	Protein Homology	CDS	354624	355082	.	+	0	ID=cds-WP_105962838.1;Parent=gene-RM588_RS01900;Dbxref=GenBank:WP_105962838.1;Name=WP_105962838.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451908.1;locus_tag=RM588_RS01900;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_105962838.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	355084	356439	.	+	.	ID=gene-RM588_RS01905;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=RM588_RS01905;old_locus_tag=RM588_01905
NZ_JAVRJR010000001.1	Protein Homology	CDS	355084	356439	.	+	0	ID=cds-WP_037573862.1;Parent=gene-RM588_RS01905;Dbxref=GenBank:WP_037573862.1;Name=WP_037573862.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500137.1;locus_tag=RM588_RS01905;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_037573862.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	356462	356836	.	+	.	ID=gene-RM588_RS01910;Name=RM588_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01910;old_locus_tag=RM588_01910
NZ_JAVRJR010000001.1	Protein Homology	CDS	356462	356836	.	+	0	ID=cds-WP_037573860.1;Parent=gene-RM588_RS01910;Dbxref=GenBank:WP_037573860.1;Name=WP_037573860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613838.1;locus_tag=RM588_RS01910;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037573860.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	356858	357250	.	+	.	ID=gene-RM588_RS01915;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=RM588_RS01915;old_locus_tag=RM588_01915
NZ_JAVRJR010000001.1	Protein Homology	CDS	356858	357250	.	+	0	ID=cds-WP_037573858.1;Parent=gene-RM588_RS01915;Dbxref=GenBank:WP_037573858.1;Name=WP_037573858.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425154.1;locus_tag=RM588_RS01915;product=transcription antitermination factor NusB;protein_id=WP_037573858.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	357259	358605	.	+	.	ID=gene-RM588_RS01920;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=RM588_RS01920;old_locus_tag=RM588_01920
NZ_JAVRJR010000001.1	Protein Homology	CDS	357259	358605	.	+	0	ID=cds-WP_107367950.1;Parent=gene-RM588_RS01920;Dbxref=GenBank:WP_107367950.1;Name=WP_107367950.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165246.1;locus_tag=RM588_RS01920;product=exodeoxyribonuclease VII large subunit;protein_id=WP_107367950.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	358589	358813	.	+	.	ID=gene-RM588_RS01925;Name=RM588_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01925;old_locus_tag=RM588_01925
NZ_JAVRJR010000001.1	Protein Homology	CDS	358589	358813	.	+	0	ID=cds-WP_037573854.1;Parent=gene-RM588_RS01925;Dbxref=GenBank:WP_037573854.1;Name=WP_037573854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613841.1;locus_tag=RM588_RS01925;product=exodeoxyribonuclease VII small subunit;protein_id=WP_037573854.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	358791	359675	.	+	.	ID=gene-RM588_RS01930;Name=RM588_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01930;old_locus_tag=RM588_01930
NZ_JAVRJR010000001.1	Protein Homology	CDS	358791	359675	.	+	0	ID=cds-WP_037573852.1;Parent=gene-RM588_RS01930;Dbxref=GenBank:WP_037573852.1;Name=WP_037573852.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364978.1;locus_tag=RM588_RS01930;product=polyprenyl synthetase family protein;protein_id=WP_037573852.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	359711	361600	.	+	.	ID=gene-RM588_RS01935;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=RM588_RS01935;old_locus_tag=RM588_01935
NZ_JAVRJR010000001.1	Protein Homology	CDS	359711	361600	.	+	0	ID=cds-WP_037573851.1;Parent=gene-RM588_RS01935;Dbxref=GenBank:WP_037573851.1;Name=WP_037573851.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010287828.1;locus_tag=RM588_RS01935;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_037573851.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	361802	362254	.	+	.	ID=gene-RM588_RS01940;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=RM588_RS01940;old_locus_tag=RM588_01940
NZ_JAVRJR010000001.1	Protein Homology	CDS	361802	362254	.	+	0	ID=cds-WP_037573850.1;Parent=gene-RM588_RS01940;Dbxref=GenBank:WP_037573850.1;Name=WP_037573850.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=RM588_RS01940;product=transcriptional regulator AhrC/ArgR;protein_id=WP_037573850.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	362267	363940	.	+	.	ID=gene-RM588_RS01945;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=RM588_RS01945;old_locus_tag=RM588_01945
NZ_JAVRJR010000001.1	Protein Homology	CDS	362267	363940	.	+	0	ID=cds-WP_037573849.1;Parent=gene-RM588_RS01945;Dbxref=GenBank:WP_037573849.1;Name=WP_037573849.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468378.1;locus_tag=RM588_RS01945;product=DNA repair protein RecN;protein_id=WP_037573849.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	363955	364851	.	+	.	ID=gene-RM588_RS01950;Name=RM588_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01950;old_locus_tag=RM588_01950
NZ_JAVRJR010000001.1	Protein Homology	CDS	363955	364851	.	+	0	ID=cds-WP_051604960.1;Parent=gene-RM588_RS01950;Dbxref=GenBank:WP_051604960.1;Name=WP_051604960.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724554.1;locus_tag=RM588_RS01950;product=phosphate acyltransferase;protein_id=WP_051604960.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	364907	365965	.	+	.	ID=gene-RM588_RS01955;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=RM588_RS01955;old_locus_tag=RM588_01955
NZ_JAVRJR010000001.1	Protein Homology	CDS	364907	365965	.	+	0	ID=cds-WP_037573848.1;Parent=gene-RM588_RS01955;Dbxref=GenBank:WP_037573848.1;Name=WP_037573848.1;Ontology_term=GO:0006113,GO:0016310,GO:0005524,GO:0047761,GO:0005737;gbkey=CDS;gene=buk;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,butyrate kinase activity|0047761||IEA;go_process=fermentation|0006113||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900390.1;locus_tag=RM588_RS01955;product=butyrate kinase;protein_id=WP_037573848.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	365977	367395	.	+	.	ID=gene-RM588_RS01960;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM588_RS01960;old_locus_tag=RM588_01960
NZ_JAVRJR010000001.1	Protein Homology	CDS	365977	367395	.	+	0	ID=cds-WP_037573847.1;Parent=gene-RM588_RS01960;Dbxref=GenBank:WP_037573847.1;Name=WP_037573847.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=RM588_RS01960;product=dihydrolipoyl dehydrogenase;protein_id=WP_037573847.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	367418	368416	.	+	.	ID=gene-RM588_RS01965;Name=RM588_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01965;old_locus_tag=RM588_01965
NZ_JAVRJR010000001.1	Protein Homology	CDS	367418	368416	.	+	0	ID=cds-WP_037573846.1;Parent=gene-RM588_RS01965;Dbxref=GenBank:WP_037573846.1;Name=WP_037573846.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613849.1;locus_tag=RM588_RS01965;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_037573846.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	368409	369392	.	+	.	ID=gene-RM588_RS01970;Name=RM588_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01970;old_locus_tag=RM588_01970
NZ_JAVRJR010000001.1	Protein Homology	CDS	368409	369392	.	+	0	ID=cds-WP_037573844.1;Parent=gene-RM588_RS01970;Dbxref=GenBank:WP_037573844.1;Name=WP_037573844.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=RM588_RS01970;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_037573844.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	369404	370669	.	+	.	ID=gene-RM588_RS01975;Name=RM588_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01975;old_locus_tag=RM588_01975
NZ_JAVRJR010000001.1	Protein Homology	CDS	369404	370669	.	+	0	ID=cds-WP_037573842.1;Parent=gene-RM588_RS01975;Dbxref=GenBank:WP_037573842.1;Name=WP_037573842.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613851.1;locus_tag=RM588_RS01975;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_037573842.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	370734	371171	.	+	.	ID=gene-RM588_RS01980;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=RM588_RS01980;old_locus_tag=RM588_01980
NZ_JAVRJR010000001.1	Protein Homology	CDS	370734	371171	.	+	0	ID=cds-WP_037573840.1;Parent=gene-RM588_RS01980;Dbxref=GenBank:WP_037573840.1;Name=WP_037573840.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=RM588_RS01980;product=bacilliredoxin BrxB;protein_id=WP_037573840.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	371183	372160	.	+	.	ID=gene-RM588_RS01985;Name=RM588_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01985;old_locus_tag=RM588_01985
NZ_JAVRJR010000001.1	Protein Homology	CDS	371183	372160	.	+	0	ID=cds-WP_037573838.1;Parent=gene-RM588_RS01985;Dbxref=GenBank:WP_037573838.1;Name=WP_037573838.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=RM588_RS01985;product=aromatic acid exporter family protein;protein_id=WP_037573838.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	372212	372313	.	-	.	ID=gene-RM588_RS01990;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=RM588_RS01990;old_locus_tag=RM588_01990
NZ_JAVRJR010000001.1	Protein Homology	CDS	372212	372313	.	-	0	ID=cds-WP_150130324.1;Parent=gene-RM588_RS01990;Dbxref=GenBank:WP_150130324.1;Name=WP_150130324.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165260.1;locus_tag=RM588_RS01990;product=stressosome-associated protein Prli42;protein_id=WP_150130324.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	372491	373603	.	+	.	ID=gene-RM588_RS01995;Name=RM588_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS01995;old_locus_tag=RM588_01995
NZ_JAVRJR010000001.1	Protein Homology	CDS	372491	373603	.	+	0	ID=cds-WP_037573836.1;Parent=gene-RM588_RS01995;Dbxref=GenBank:WP_037573836.1;Name=WP_037573836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425139.1;locus_tag=RM588_RS01995;product=tripeptidase T;protein_id=WP_037573836.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	373695	375098	.	+	.	ID=gene-RM588_RS02000;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=RM588_RS02000;old_locus_tag=RM588_02000
NZ_JAVRJR010000001.1	Protein Homology	CDS	373695	375098	.	+	0	ID=cds-WP_037573834.1;Parent=gene-RM588_RS02000;Dbxref=GenBank:WP_037573834.1;Name=WP_037573834.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613855.1;locus_tag=RM588_RS02000;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_037573834.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	375237	376094	.	-	.	ID=gene-RM588_RS02005;Name=RM588_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02005;old_locus_tag=RM588_02005
NZ_JAVRJR010000001.1	Protein Homology	CDS	375237	376094	.	-	0	ID=cds-WP_037573832.1;Parent=gene-RM588_RS02005;Dbxref=GenBank:WP_037573832.1;Name=WP_037573832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511212.1;locus_tag=RM588_RS02005;product=AraC family transcriptional regulator;protein_id=WP_037573832.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	376198	377682	.	-	.	ID=gene-RM588_RS02010;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=RM588_RS02010;old_locus_tag=RM588_02010
NZ_JAVRJR010000001.1	Protein Homology	CDS	376198	377682	.	-	0	ID=cds-WP_037573831.1;Parent=gene-RM588_RS02010;Dbxref=GenBank:WP_037573831.1;Name=WP_037573831.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382473.1;locus_tag=RM588_RS02010;product=glucose-6-phosphate dehydrogenase;protein_id=WP_037573831.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	377843	378760	.	+	.	ID=gene-RM588_RS02015;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=RM588_RS02015;old_locus_tag=RM588_02015
NZ_JAVRJR010000001.1	Protein Homology	CDS	377843	378760	.	+	0	ID=cds-WP_037573830.1;Parent=gene-RM588_RS02015;Dbxref=GenBank:WP_037573830.1;Name=WP_037573830.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483224.1;locus_tag=RM588_RS02015;product=ribonuclease Z;protein_id=WP_037573830.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	378849	379667	.	-	.	ID=gene-RM588_RS02020;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=RM588_RS02020;old_locus_tag=RM588_02020
NZ_JAVRJR010000001.1	Protein Homology	CDS	378849	379667	.	-	0	ID=cds-WP_037573829.1;Parent=gene-RM588_RS02020;Dbxref=GenBank:WP_037573829.1;Name=WP_037573829.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468364.1;locus_tag=RM588_RS02020;product=pyrroline-5-carboxylate reductase;protein_id=WP_037573829.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	379996	380904	.	-	.	ID=gene-RM588_RS02025;Name=RM588_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02025;old_locus_tag=RM588_02025
NZ_JAVRJR010000001.1	Protein Homology	CDS	379996	380904	.	-	0	ID=cds-WP_103159479.1;Parent=gene-RM588_RS02025;Dbxref=GenBank:WP_103159479.1;Name=WP_103159479.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500109.1;locus_tag=RM588_RS02025;product=aldo/keto reductase;protein_id=WP_103159479.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	380983	381525	.	+	.	ID=gene-RM588_RS02030;Name=RM588_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02030;old_locus_tag=RM588_02030
NZ_JAVRJR010000001.1	Protein Homology	CDS	380983	381525	.	+	0	ID=cds-WP_103159478.1;Parent=gene-RM588_RS02030;Dbxref=GenBank:WP_103159478.1;Name=WP_103159478.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465769.1;locus_tag=RM588_RS02030;product=NUDIX hydrolase;protein_id=WP_103159478.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	381629	382081	.	+	.	ID=gene-RM588_RS02035;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=RM588_RS02035;old_locus_tag=RM588_02035
NZ_JAVRJR010000001.1	Protein Homology	CDS	381629	382081	.	+	0	ID=cds-WP_103159477.1;Parent=gene-RM588_RS02035;Dbxref=GenBank:WP_103159477.1;Name=WP_103159477.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016186688.1;locus_tag=RM588_RS02035;product=ferric iron uptake transcriptional regulator;protein_id=WP_103159477.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	382121	383008	.	+	.	ID=gene-RM588_RS02040;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=RM588_RS02040;old_locus_tag=RM588_02040
NZ_JAVRJR010000001.1	Protein Homology	CDS	382121	383008	.	+	0	ID=cds-WP_103159476.1;Parent=gene-RM588_RS02040;Dbxref=GenBank:WP_103159476.1;Name=WP_103159476.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425129.1;locus_tag=RM588_RS02040;product=site-specific tyrosine recombinase XerD;protein_id=WP_103159476.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	383030	383542	.	-	.	ID=gene-RM588_RS02045;Name=RM588_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02045;old_locus_tag=RM588_02045
NZ_JAVRJR010000001.1	Protein Homology	CDS	383030	383542	.	-	0	ID=cds-WP_241955383.1;Parent=gene-RM588_RS02045;Dbxref=GenBank:WP_241955383.1;Name=WP_241955383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483231.1;locus_tag=RM588_RS02045;product=DUF309 domain-containing protein;protein_id=WP_241955383.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	383629	384363	.	+	.	ID=gene-RM588_RS02050;Name=RM588_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02050;old_locus_tag=RM588_02050
NZ_JAVRJR010000001.1	Protein Homology	CDS	383629	384363	.	+	0	ID=cds-WP_103159474.1;Parent=gene-RM588_RS02050;Dbxref=GenBank:WP_103159474.1;Name=WP_103159474.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468357.1;locus_tag=RM588_RS02050;product=segregation and condensation protein A;protein_id=WP_103159474.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	384347	384892	.	+	.	ID=gene-RM588_RS02055;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=RM588_RS02055;old_locus_tag=RM588_02055
NZ_JAVRJR010000001.1	Protein Homology	CDS	384347	384892	.	+	0	ID=cds-WP_103159473.1;Parent=gene-RM588_RS02055;Dbxref=GenBank:WP_103159473.1;Name=WP_103159473.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613870.1;locus_tag=RM588_RS02055;product=SMC-Scp complex subunit ScpB;protein_id=WP_103159473.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	384889	385632	.	+	.	ID=gene-RM588_RS02060;Name=RM588_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02060;old_locus_tag=RM588_02060
NZ_JAVRJR010000001.1	Protein Homology	CDS	384889	385632	.	+	0	ID=cds-WP_037573811.1;Parent=gene-RM588_RS02060;Dbxref=GenBank:WP_037573811.1;Name=WP_037573811.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382455.1;locus_tag=RM588_RS02060;product=pseudouridine synthase;protein_id=WP_037573811.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	385804	386529	.	+	.	ID=gene-RM588_RS02065;Name=RM588_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02065;old_locus_tag=RM588_02065
NZ_JAVRJR010000001.1	Protein Homology	CDS	385804	386529	.	+	0	ID=cds-WP_037573808.1;Parent=gene-RM588_RS02065;Dbxref=GenBank:WP_037573808.1;Name=WP_037573808.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483235.1;locus_tag=RM588_RS02065;product=response regulator transcription factor;protein_id=WP_037573808.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	386513	388246	.	+	.	ID=gene-RM588_RS02070;Name=RM588_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02070;old_locus_tag=RM588_02070
NZ_JAVRJR010000001.1	Protein Homology	CDS	386513	388246	.	+	0	ID=cds-WP_037573805.1;Parent=gene-RM588_RS02070;Dbxref=GenBank:WP_037573805.1;Name=WP_037573805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613873.1;locus_tag=RM588_RS02070;product=ATP-binding protein;protein_id=WP_037573805.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	388574	389128	.	+	.	ID=gene-RM588_RS02075;Name=RM588_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02075;old_locus_tag=RM588_02075
NZ_JAVRJR010000001.1	Protein Homology	CDS	388574	389128	.	+	0	ID=cds-WP_037573800.1;Parent=gene-RM588_RS02075;Dbxref=GenBank:WP_037573800.1;Name=WP_037573800.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637951.1;locus_tag=RM588_RS02075;product=ECF transporter S component;protein_id=WP_037573800.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	389202	389450	.	-	.	ID=gene-RM588_RS02080;Name=RM588_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02080;old_locus_tag=RM588_02080
NZ_JAVRJR010000001.1	Protein Homology	CDS	389202	389450	.	-	0	ID=cds-WP_037573797.1;Parent=gene-RM588_RS02080;Dbxref=GenBank:WP_037573797.1;Name=WP_037573797.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=RM588_RS02080;product=ferredoxin;protein_id=WP_037573797.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	389556	390506	.	+	.	ID=gene-RM588_RS02085;Name=RM588_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02085;old_locus_tag=RM588_02085
NZ_JAVRJR010000001.1	Protein Homology	CDS	389556	390506	.	+	0	ID=cds-WP_103159472.1;Parent=gene-RM588_RS02085;Dbxref=GenBank:WP_103159472.1;Name=WP_103159472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025846.7;locus_tag=RM588_RS02085;product=helix-turn-helix domain-containing protein;protein_id=WP_103159472.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	390499	391875	.	+	.	ID=gene-RM588_RS02090;Name=RM588_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02090;old_locus_tag=RM588_02090
NZ_JAVRJR010000001.1	Protein Homology	CDS	390499	391875	.	+	0	ID=cds-WP_103159471.1;Parent=gene-RM588_RS02090;Dbxref=GenBank:WP_103159471.1;Name=WP_103159471.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472147.1;locus_tag=RM588_RS02090;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_103159471.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	392057	393931	.	+	.	ID=gene-RM588_RS02095;Name=RM588_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02095;old_locus_tag=RM588_02095
NZ_JAVRJR010000001.1	Protein Homology	CDS	392057	393931	.	+	0	ID=cds-WP_103159470.1;Parent=gene-RM588_RS02095;Dbxref=GenBank:WP_103159470.1;Name=WP_103159470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451127.1;locus_tag=RM588_RS02095;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_103159470.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	394207	395193	.	+	.	ID=gene-RM588_RS02100;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=RM588_RS02100;old_locus_tag=RM588_02100
NZ_JAVRJR010000001.1	Protein Homology	CDS	394207	395193	.	+	0	ID=cds-WP_311548058.1;Parent=gene-RM588_RS02100;Dbxref=GenBank:WP_311548058.1;Name=WP_311548058.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=RM588_RS02100;product=bacillithiol disulfide reductase YpdA;protein_id=WP_311548058.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	395368	396336	.	-	.	ID=gene-RM588_RS02105;Name=RM588_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02105;old_locus_tag=RM588_02105
NZ_JAVRJR010000001.1	Protein Homology	CDS	395368	396336	.	-	0	ID=cds-WP_103159468.1;Parent=gene-RM588_RS02105;Dbxref=GenBank:WP_103159468.1;Name=WP_103159468.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=obsolete asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219614.1;locus_tag=RM588_RS02105;product=asparaginase;protein_id=WP_103159468.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	396409	397080	.	+	.	ID=gene-RM588_RS02110;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=RM588_RS02110;old_locus_tag=RM588_02110
NZ_JAVRJR010000001.1	Protein Homology	CDS	396409	397080	.	+	0	ID=cds-WP_037573782.1;Parent=gene-RM588_RS02110;Dbxref=GenBank:WP_037573782.1;Name=WP_037573782.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451130.1;locus_tag=RM588_RS02110;product=(d)CMP kinase;protein_id=WP_037573782.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	397312	398496	.	+	.	ID=gene-RM588_RS02115;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=RM588_RS02115;old_locus_tag=RM588_02115
NZ_JAVRJR010000001.1	Protein Homology	CDS	397312	398496	.	+	0	ID=cds-WP_037573779.1;Parent=gene-RM588_RS02115;Dbxref=GenBank:WP_037573779.1;Name=WP_037573779.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382440.1;locus_tag=RM588_RS02115;product=30S ribosomal protein S1;protein_id=WP_037573779.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	398805	400115	.	+	.	ID=gene-RM588_RS02120;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=RM588_RS02120;old_locus_tag=RM588_02120
NZ_JAVRJR010000001.1	Protein Homology	CDS	398805	400115	.	+	0	ID=cds-WP_037573775.1;Parent=gene-RM588_RS02120;Dbxref=GenBank:WP_037573775.1;Name=WP_037573775.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=RM588_RS02120;product=ribosome biogenesis GTPase Der;protein_id=WP_037573775.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	400132	401130	.	+	.	ID=gene-RM588_RS02125;Name=RM588_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02125;old_locus_tag=RM588_02125
NZ_JAVRJR010000001.1	Protein Homology	CDS	400132	401130	.	+	0	ID=cds-WP_037573772.1;Parent=gene-RM588_RS02125;Dbxref=GenBank:WP_037573772.1;Name=WP_037573772.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=RM588_RS02125;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_037573772.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	401418	401690	.	+	.	ID=gene-RM588_RS02130;Name=hbs;gbkey=Gene;gene=hbs;gene_biotype=protein_coding;gene_synonym=hbsU,hupA;locus_tag=RM588_RS02130;old_locus_tag=RM588_02130
NZ_JAVRJR010000001.1	Protein Homology	CDS	401418	401690	.	+	0	ID=cds-WP_037564282.1;Parent=gene-RM588_RS02130;Dbxref=GenBank:WP_037564282.1;Name=WP_037564282.1;Ontology_term=GO:0006270,GO:0030261,GO:0003677,GO:0030527,GO:0042802;gbkey=CDS;gene=hbs;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA,identical protein binding|0042802||IEA;go_process=DNA replication initiation|0006270||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=RM588_RS02130;product=non-specific DNA-binding protein Hbs;protein_id=WP_037564282.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	401978	402565	.	+	.	ID=gene-RM588_RS02135;Name=RM588_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02135;old_locus_tag=RM588_02135
NZ_JAVRJR010000001.1	Protein Homology	CDS	401978	402565	.	+	0	ID=cds-WP_103159467.1;Parent=gene-RM588_RS02135;Dbxref=GenBank:WP_103159467.1;Name=WP_103159467.1;Ontology_term=GO:0009234;gbkey=CDS;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: protein motif:HMM:NF046766.4;locus_tag=RM588_RS02135;product=heptaprenyl diphosphate synthase component 1;protein_id=WP_103159467.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	402558	403268	.	+	.	ID=gene-RM588_RS02140;Name=RM588_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02140;old_locus_tag=RM588_02140
NZ_JAVRJR010000001.1	Protein Homology	CDS	402558	403268	.	+	0	ID=cds-WP_037573770.1;Parent=gene-RM588_RS02140;Dbxref=GenBank:WP_037573770.1;Name=WP_037573770.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480974.1;locus_tag=RM588_RS02140;product=demethylmenaquinone methyltransferase;protein_id=WP_037573770.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	403284	404240	.	+	.	ID=gene-RM588_RS02145;Name=RM588_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02145;old_locus_tag=RM588_02145
NZ_JAVRJR010000001.1	Protein Homology	CDS	403284	404240	.	+	0	ID=cds-WP_311548059.1;Parent=gene-RM588_RS02145;Dbxref=GenBank:WP_311548059.1;Name=WP_311548059.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167603.1;locus_tag=RM588_RS02145;product=polyprenyl synthetase family protein;protein_id=WP_311548059.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	404322	404771	.	+	.	ID=gene-RM588_RS02150;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=RM588_RS02150;old_locus_tag=RM588_02150
NZ_JAVRJR010000001.1	Protein Homology	CDS	404322	404771	.	+	0	ID=cds-WP_103159465.1;Parent=gene-RM588_RS02150;Dbxref=GenBank:WP_103159465.1;Name=WP_103159465.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463054.1;locus_tag=RM588_RS02150;product=nucleoside-diphosphate kinase;protein_id=WP_103159465.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	404989	406155	.	+	.	ID=gene-RM588_RS02155;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=RM588_RS02155;old_locus_tag=RM588_02155
NZ_JAVRJR010000001.1	Protein Homology	CDS	404989	406155	.	+	0	ID=cds-WP_103159464.1;Parent=gene-RM588_RS02155;Dbxref=GenBank:WP_103159464.1;Name=WP_103159464.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=RM588_RS02155;product=chorismate synthase;protein_id=WP_103159464.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	406168	407235	.	+	.	ID=gene-RM588_RS02160;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=RM588_RS02160;old_locus_tag=RM588_02160
NZ_JAVRJR010000001.1	Protein Homology	CDS	406168	407235	.	+	0	ID=cds-WP_107360472.1;Parent=gene-RM588_RS02160;Dbxref=GenBank:WP_107360472.1;Name=WP_107360472.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729139.1;locus_tag=RM588_RS02160;product=3-dehydroquinate synthase;protein_id=WP_107360472.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	407236	408525	.	+	.	ID=gene-RM588_RS02165;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=RM588_RS02165;old_locus_tag=RM588_02165
NZ_JAVRJR010000001.1	Protein Homology	CDS	407236	408525	.	+	0	ID=cds-WP_107360473.1;Parent=gene-RM588_RS02165;Dbxref=GenBank:WP_107360473.1;Name=WP_107360473.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729138.1;locus_tag=RM588_RS02165;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_107360473.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	408527	409768	.	+	.	ID=gene-RM588_RS02170;Name=RM588_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02170;old_locus_tag=RM588_02170
NZ_JAVRJR010000001.1	Protein Homology	CDS	408527	409768	.	+	0	ID=cds-WP_105965310.1;Parent=gene-RM588_RS02170;Dbxref=GenBank:WP_105965310.1;Name=WP_105965310.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613893.1;locus_tag=RM588_RS02170;product=tetratricopeptide repeat protein;protein_id=WP_105965310.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	409780	410340	.	+	.	ID=gene-RM588_RS02175;Name=RM588_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02175;old_locus_tag=RM588_02175
NZ_JAVRJR010000001.1	Protein Homology	CDS	409780	410340	.	+	0	ID=cds-WP_107366171.1;Parent=gene-RM588_RS02175;Dbxref=GenBank:WP_107366171.1;Name=WP_107366171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020439.7;locus_tag=RM588_RS02175;product=YpiB family protein;protein_id=WP_107366171.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	410345	410947	.	+	.	ID=gene-RM588_RS02180;Name=RM588_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02180;old_locus_tag=RM588_02180
NZ_JAVRJR010000001.1	Protein Homology	CDS	410345	410947	.	+	0	ID=cds-WP_311548060.1;Parent=gene-RM588_RS02180;Dbxref=GenBank:WP_311548060.1;Name=WP_311548060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468924.1;locus_tag=RM588_RS02180;product=DUF1405 domain-containing protein;protein_id=WP_311548060.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	410984	411679	.	+	.	ID=gene-RM588_RS02185;Name=RM588_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02185;old_locus_tag=RM588_02185
NZ_JAVRJR010000001.1	Protein Homology	CDS	410984	411679	.	+	0	ID=cds-WP_037573744.1;Parent=gene-RM588_RS02185;Dbxref=GenBank:WP_037573744.1;Name=WP_037573744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468925.1;locus_tag=RM588_RS02185;product=zinc metallopeptidase;protein_id=WP_037573744.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	411825	412145	.	+	.	ID=gene-RM588_RS02190;Name=RM588_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02190;old_locus_tag=RM588_02190
NZ_JAVRJR010000001.1	Protein Homology	CDS	411825	412145	.	+	0	ID=cds-WP_037573741.1;Parent=gene-RM588_RS02190;Dbxref=GenBank:WP_037573741.1;Name=WP_037573741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507577.1;locus_tag=RM588_RS02190;product=nucleotide pyrophosphohydrolase;protein_id=WP_037573741.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	412162	413298	.	+	.	ID=gene-RM588_RS02195;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=RM588_RS02195;old_locus_tag=RM588_02195
NZ_JAVRJR010000001.1	Protein Homology	CDS	412162	413298	.	+	0	ID=cds-WP_103159459.1;Parent=gene-RM588_RS02195;Dbxref=GenBank:WP_103159459.1;Name=WP_103159459.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383771.1;locus_tag=RM588_RS02195;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_103159459.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	413291	414493	.	+	.	ID=gene-RM588_RS02200;Name=RM588_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02200;old_locus_tag=RM588_02200
NZ_JAVRJR010000001.1	Protein Homology	CDS	413291	414493	.	+	0	ID=cds-WP_037573734.1;Parent=gene-RM588_RS02200;Dbxref=GenBank:WP_037573734.1;Name=WP_037573734.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361529.1;locus_tag=RM588_RS02200;product=CCA tRNA nucleotidyltransferase;protein_id=WP_037573734.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	414480	415451	.	+	.	ID=gene-RM588_RS02205;Name=RM588_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02205;old_locus_tag=RM588_02205
NZ_JAVRJR010000001.1	Protein Homology	CDS	414480	415451	.	+	0	ID=cds-WP_103159457.1;Parent=gene-RM588_RS02205;Dbxref=GenBank:WP_103159457.1;Name=WP_103159457.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=RM588_RS02205;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_103159457.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	415471	418155	.	+	.	ID=gene-RM588_RS02210;Name=RM588_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02210;old_locus_tag=RM588_02210
NZ_JAVRJR010000001.1	Protein Homology	CDS	415471	418155	.	+	0	ID=cds-WP_105962818.1;Parent=gene-RM588_RS02210;Dbxref=GenBank:WP_105962818.1;Name=WP_105962818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364995.1;locus_tag=RM588_RS02210;product=ATP-dependent DNA helicase DinG%2C 3'-5' exoribonuclease type;protein_id=WP_105962818.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	418250	419542	.	+	.	ID=gene-RM588_RS02215;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=RM588_RS02215;old_locus_tag=RM588_02215
NZ_JAVRJR010000001.1	Protein Homology	CDS	418250	419542	.	+	0	ID=cds-WP_037573726.1;Parent=gene-RM588_RS02215;Dbxref=GenBank:WP_037573726.1;Name=WP_037573726.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=RM588_RS02215;product=asparagine--tRNA ligase;protein_id=WP_037573726.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	419627	420319	.	+	.	ID=gene-RM588_RS02220;Name=RM588_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02220;old_locus_tag=RM588_02220
NZ_JAVRJR010000001.1	Protein Homology	CDS	419627	420319	.	+	0	ID=cds-WP_037573723.1;Parent=gene-RM588_RS02220;Dbxref=GenBank:WP_037573723.1;Name=WP_037573723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=RM588_RS02220;product=DnaD domain-containing protein;protein_id=WP_037573723.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	420309	420983	.	+	.	ID=gene-RM588_RS02225;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=RM588_RS02225;old_locus_tag=RM588_02225
NZ_JAVRJR010000001.1	Protein Homology	CDS	420309	420983	.	+	0	ID=cds-WP_311548061.1;Parent=gene-RM588_RS02225;Dbxref=GenBank:WP_311548061.1;Name=WP_311548061.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165308.1;locus_tag=RM588_RS02225;product=endonuclease III;protein_id=WP_311548061.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	420980	421348	.	+	.	ID=gene-RM588_RS02230;Name=RM588_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02230;old_locus_tag=RM588_02230
NZ_JAVRJR010000001.1	Protein Homology	CDS	420980	421348	.	+	0	ID=cds-WP_037573717.1;Parent=gene-RM588_RS02230;Dbxref=GenBank:WP_037573717.1;Name=WP_037573717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425092.1;locus_tag=RM588_RS02230;product=YpoC family protein;protein_id=WP_037573717.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	421464	423653	.	-	.	ID=gene-RM588_RS02235;Name=RM588_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02235;old_locus_tag=RM588_02235
NZ_JAVRJR010000001.1	Protein Homology	CDS	421464	423653	.	-	0	ID=cds-WP_037573714.1;Parent=gene-RM588_RS02235;Dbxref=GenBank:WP_037573714.1;Name=WP_037573714.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167620.1;locus_tag=RM588_RS02235;product=transglycosylase domain-containing protein;protein_id=WP_037573714.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	423650	424276	.	-	.	ID=gene-RM588_RS02240;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=RM588_RS02240;old_locus_tag=RM588_02240
NZ_JAVRJR010000001.1	Protein Homology	CDS	423650	424276	.	-	0	ID=cds-WP_037573711.1;Parent=gene-RM588_RS02240;Dbxref=GenBank:WP_037573711.1;Name=WP_037573711.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=RM588_RS02240;product=Holliday junction resolvase RecU;protein_id=WP_037573711.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	424791	425123	.	+	.	ID=gene-RM588_RS02245;Name=RM588_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02245;old_locus_tag=RM588_02245
NZ_JAVRJR010000001.1	Protein Homology	CDS	424791	425123	.	+	0	ID=cds-WP_105962816.1;Parent=gene-RM588_RS02245;Dbxref=GenBank:WP_105962816.1;Name=WP_105962816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020386.7;locus_tag=RM588_RS02245;product=DUF1798 family protein;protein_id=WP_105962816.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	425116	425673	.	+	.	ID=gene-RM588_RS02250;Name=RM588_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02250;old_locus_tag=RM588_02250
NZ_JAVRJR010000001.1	Protein Homology	CDS	425116	425673	.	+	0	ID=cds-WP_037573706.1;Parent=gene-RM588_RS02250;Dbxref=GenBank:WP_037573706.1;Name=WP_037573706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480952.1;locus_tag=RM588_RS02250;product=SLOG family protein;protein_id=WP_037573706.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	425695	426030	.	+	.	ID=gene-RM588_RS02255;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=RM588_RS02255;old_locus_tag=RM588_02255
NZ_JAVRJR010000001.1	Protein Homology	CDS	425695	426030	.	+	0	ID=cds-WP_037573703.1;Parent=gene-RM588_RS02255;Dbxref=GenBank:WP_037573703.1;Name=WP_037573703.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=RM588_RS02255;product=cell division regulator GpsB;protein_id=WP_037573703.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	426073	426454	.	+	.	ID=gene-RM588_RS02260;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=RM588_RS02260;old_locus_tag=RM588_02260
NZ_JAVRJR010000001.1	cmsearch	RNase_P_RNA	426073	426454	.	+	.	ID=rna-RM588_RS02260;Parent=gene-RM588_RS02260;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS02260;product=RNase P RNA component class B
NZ_JAVRJR010000001.1	cmsearch	exon	426073	426454	.	+	.	ID=exon-RM588_RS02260-1;Parent=rna-RM588_RS02260;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00011,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS02260;product=RNase P RNA component class B
NZ_JAVRJR010000001.1	RefSeq	gene	426652	427776	.	+	.	ID=gene-RM588_RS02265;Name=RM588_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02265;old_locus_tag=RM588_02265
NZ_JAVRJR010000001.1	Protein Homology	CDS	426652	427776	.	+	0	ID=cds-WP_037573700.1;Parent=gene-RM588_RS02265;Dbxref=GenBank:WP_037573700.1;Name=WP_037573700.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425085.1;locus_tag=RM588_RS02265;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_037573700.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	427828	428742	.	+	.	ID=gene-RM588_RS02270;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=RM588_RS02270;old_locus_tag=RM588_02270
NZ_JAVRJR010000001.1	Protein Homology	CDS	427828	428742	.	+	0	ID=cds-WP_037573697.1;Parent=gene-RM588_RS02270;Dbxref=GenBank:WP_037573697.1;Name=WP_037573697.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425084.1;locus_tag=RM588_RS02270;product=EamA family transporter RarD;protein_id=WP_037573697.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	428895	432356	.	+	.	ID=gene-RM588_RS02275;Name=RM588_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02275;old_locus_tag=RM588_02275
NZ_JAVRJR010000001.1	Protein Homology	CDS	428895	432356	.	+	0	ID=cds-WP_311548062.1;Parent=gene-RM588_RS02275;Dbxref=GenBank:WP_311548062.1;Name=WP_311548062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729128.1;locus_tag=RM588_RS02275;product=dynamin family protein;protein_id=WP_311548062.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	432353	433240	.	+	.	ID=gene-RM588_RS02280;Name=RM588_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02280;old_locus_tag=RM588_02280
NZ_JAVRJR010000001.1	Protein Homology	CDS	432353	433240	.	+	0	ID=cds-WP_103159450.1;Parent=gene-RM588_RS02280;Dbxref=GenBank:WP_103159450.1;Name=WP_103159450.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835246.1;locus_tag=RM588_RS02280;product=5'-3' exonuclease;protein_id=WP_103159450.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	433269	433694	.	-	.	ID=gene-RM588_RS02285;Name=RM588_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02285;old_locus_tag=RM588_02285
NZ_JAVRJR010000001.1	Protein Homology	CDS	433269	433694	.	-	0	ID=cds-WP_103159449.1;Parent=gene-RM588_RS02285;Dbxref=GenBank:WP_103159449.1;Name=WP_103159449.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062934.1;locus_tag=RM588_RS02285;product=ribonuclease HI family protein;protein_id=WP_103159449.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	433884	434597	.	-	.	ID=gene-RM588_RS02290;Name=RM588_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02290;old_locus_tag=RM588_02290
NZ_JAVRJR010000001.1	Protein Homology	CDS	433884	434597	.	-	0	ID=cds-WP_103159448.1;Parent=gene-RM588_RS02290;Dbxref=GenBank:WP_103159448.1;Name=WP_103159448.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=RM588_RS02290;product=queuosine precursor transporter;protein_id=WP_103159448.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	434847	435032	.	+	.	ID=gene-RM588_RS02295;Name=RM588_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02295;old_locus_tag=RM588_02295
NZ_JAVRJR010000001.1	Protein Homology	CDS	434847	435032	.	+	0	ID=cds-WP_037573683.1;Parent=gene-RM588_RS02295;Dbxref=GenBank:WP_037573683.1;Name=WP_037573683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613917.1;locus_tag=RM588_RS02295;product=zinc-finger domain-containing protein;protein_id=WP_037573683.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	435043	436161	.	+	.	ID=gene-RM588_RS02300;Name=RM588_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02300;old_locus_tag=RM588_02300
NZ_JAVRJR010000001.1	Protein Homology	CDS	435043	436161	.	+	0	ID=cds-WP_037573680.1;Parent=gene-RM588_RS02300;Dbxref=GenBank:WP_037573680.1;Name=WP_037573680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468951.1;locus_tag=RM588_RS02300;product=virulence factor;protein_id=WP_037573680.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	436180	436620	.	+	.	ID=gene-RM588_RS02305;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=RM588_RS02305;old_locus_tag=RM588_02305
NZ_JAVRJR010000001.1	Protein Homology	CDS	436180	436620	.	+	0	ID=cds-WP_037573677.1;Parent=gene-RM588_RS02305;Dbxref=GenBank:WP_037573677.1;Name=WP_037573677.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167633.1;locus_tag=RM588_RS02305;product=bacilliredoxin BrxA;protein_id=WP_037573677.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	436834	437787	.	+	.	ID=gene-RM588_RS02310;Name=RM588_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02310;old_locus_tag=RM588_02310
NZ_JAVRJR010000001.1	Protein Homology	CDS	436834	437787	.	+	0	ID=cds-WP_037573674.1;Parent=gene-RM588_RS02310;Dbxref=GenBank:WP_037573674.1;Name=WP_037573674.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613920.1;locus_tag=RM588_RS02310;product=thymidylate synthase;protein_id=WP_037573674.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	437849	438325	.	+	.	ID=gene-RM588_RS02315;Name=RM588_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02315;old_locus_tag=RM588_02315
NZ_JAVRJR010000001.1	Protein Homology	CDS	437849	438325	.	+	0	ID=cds-WP_103159580.1;Parent=gene-RM588_RS02315;Dbxref=GenBank:WP_103159580.1;Name=WP_103159580.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167635.1;locus_tag=RM588_RS02315;product=dihydrofolate reductase;protein_id=WP_103159580.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	438343	439188	.	+	.	ID=gene-RM588_RS02320;Name=RM588_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02320;old_locus_tag=RM588_02320
NZ_JAVRJR010000001.1	Protein Homology	CDS	438343	439188	.	+	0	ID=cds-WP_037573668.1;Parent=gene-RM588_RS02320;Dbxref=GenBank:WP_037573668.1;Name=WP_037573668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613922.1;locus_tag=RM588_RS02320;product=fatty acid kinase binding subunit FakB;protein_id=WP_037573668.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	439207	439734	.	+	.	ID=gene-RM588_RS02325;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM588_RS02325;old_locus_tag=RM588_02325
NZ_JAVRJR010000001.1	Protein Homology	CDS	439207	439734	.	+	0	ID=cds-WP_037573665.1;Parent=gene-RM588_RS02325;Dbxref=GenBank:WP_037573665.1;Name=WP_037573665.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453252.1;locus_tag=RM588_RS02325;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_037573665.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	439727	440155	.	+	.	ID=gene-RM588_RS02330;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=RM588_RS02330;old_locus_tag=RM588_02330
NZ_JAVRJR010000001.1	Protein Homology	CDS	439727	440155	.	+	0	ID=cds-WP_105965306.1;Parent=gene-RM588_RS02330;Dbxref=GenBank:WP_105965306.1;Name=WP_105965306.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=RM588_RS02330;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_105965306.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	440170	440670	.	+	.	ID=gene-RM588_RS02335;Name=RM588_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02335;old_locus_tag=RM588_02335
NZ_JAVRJR010000001.1	Protein Homology	CDS	440170	440670	.	+	0	ID=cds-WP_105965305.1;Parent=gene-RM588_RS02335;Dbxref=GenBank:WP_105965305.1;Name=WP_105965305.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219605.1;locus_tag=RM588_RS02335;product=PTS sugar transporter subunit IIA;protein_id=WP_105965305.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	440670	440891	.	+	.	ID=gene-RM588_RS02340;Name=RM588_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02340;old_locus_tag=RM588_02340
NZ_JAVRJR010000001.1	Protein Homology	CDS	440670	440891	.	+	0	ID=cds-WP_103159582.1;Parent=gene-RM588_RS02340;Dbxref=GenBank:WP_103159582.1;Name=WP_103159582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801007.1;locus_tag=RM588_RS02340;product=YozE family protein;protein_id=WP_103159582.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	441039	442478	.	+	.	ID=gene-RM588_RS02345;Name=RM588_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02345;old_locus_tag=RM588_02345
NZ_JAVRJR010000001.1	Protein Homology	CDS	441039	442478	.	+	0	ID=cds-WP_105965304.1;Parent=gene-RM588_RS02345;Dbxref=GenBank:WP_105965304.1;Name=WP_105965304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455339.1;locus_tag=RM588_RS02345;product=S41 family peptidase;protein_id=WP_105965304.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	442478	442987	.	+	.	ID=gene-RM588_RS02350;Name=RM588_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02350;old_locus_tag=RM588_02350
NZ_JAVRJR010000001.1	Protein Homology	CDS	442478	442987	.	+	0	ID=cds-WP_311548063.1;Parent=gene-RM588_RS02350;Dbxref=GenBank:WP_311548063.1;Name=WP_311548063.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729121.1;locus_tag=RM588_RS02350;product=GNAT family N-acetyltransferase;protein_id=WP_311548063.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	442997	444067	.	+	.	ID=gene-RM588_RS02355;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=RM588_RS02355;old_locus_tag=RM588_02355
NZ_JAVRJR010000001.1	Protein Homology	CDS	442997	444067	.	+	0	ID=cds-WP_311548064.1;Parent=gene-RM588_RS02355;Dbxref=GenBank:WP_311548064.1;Name=WP_311548064.1;Ontology_term=GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425068.1;locus_tag=RM588_RS02355;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_311548064.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	444082	444696	.	+	.	ID=gene-RM588_RS02360;Name=RM588_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02360;old_locus_tag=RM588_02360
NZ_JAVRJR010000001.1	Protein Homology	CDS	444082	444696	.	+	0	ID=cds-WP_037573648.1;Parent=gene-RM588_RS02360;Dbxref=GenBank:WP_037573648.1;Name=WP_037573648.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425067.1;locus_tag=RM588_RS02360;product=phosphatase PAP2 family protein;protein_id=WP_037573648.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	445053	445730	.	+	.	ID=gene-RM588_RS02365;Name=RM588_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02365;old_locus_tag=RM588_02365
NZ_JAVRJR010000001.1	Protein Homology	CDS	445053	445730	.	+	0	ID=cds-WP_037573645.1;Parent=gene-RM588_RS02365;Dbxref=GenBank:WP_037573645.1;Name=WP_037573645.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167644.1;locus_tag=RM588_RS02365;product=response regulator transcription factor;protein_id=WP_037573645.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	445727	447097	.	+	.	ID=gene-RM588_RS02370;Name=RM588_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02370;old_locus_tag=RM588_02370
NZ_JAVRJR010000001.1	Protein Homology	CDS	445727	447097	.	+	0	ID=cds-WP_103159586.1;Parent=gene-RM588_RS02370;Dbxref=GenBank:WP_103159586.1;Name=WP_103159586.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459152.1;locus_tag=RM588_RS02370;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_103159586.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	447188	449977	.	+	.	ID=gene-RM588_RS02375;Name=RM588_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02375;old_locus_tag=RM588_02375
NZ_JAVRJR010000001.1	Protein Homology	CDS	447188	449977	.	+	0	ID=cds-WP_037573639.1;Parent=gene-RM588_RS02375;Dbxref=GenBank:WP_037573639.1;Name=WP_037573639.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425064.1;locus_tag=RM588_RS02375;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_037573639.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	449991	451247	.	+	.	ID=gene-RM588_RS02380;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=RM588_RS02380;old_locus_tag=RM588_02380
NZ_JAVRJR010000001.1	Protein Homology	CDS	449991	451247	.	+	0	ID=cds-WP_037573635.1;Parent=gene-RM588_RS02380;Dbxref=GenBank:WP_037573635.1;Name=WP_037573635.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499943.1;locus_tag=RM588_RS02380;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_037573635.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	451541	452353	.	+	.	ID=gene-RM588_RS02385;Name=RM588_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02385;old_locus_tag=RM588_02385
NZ_JAVRJR010000001.1	Protein Homology	CDS	451541	452353	.	+	0	ID=cds-WP_037573632.1;Parent=gene-RM588_RS02385;Dbxref=GenBank:WP_037573632.1;Name=WP_037573632.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442836.1;locus_tag=RM588_RS02385;product=VOC family protein;protein_id=WP_037573632.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	452370	452576	.	+	.	ID=gene-RM588_RS02390;Name=RM588_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02390;old_locus_tag=RM588_02390
NZ_JAVRJR010000001.1	Protein Homology	CDS	452370	452576	.	+	0	ID=cds-WP_037573629.1;Parent=gene-RM588_RS02390;Dbxref=GenBank:WP_037573629.1;Name=WP_037573629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=RM588_RS02390;product=DUF6501 family protein;protein_id=WP_037573629.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	452644	453441	.	+	.	ID=gene-RM588_RS02395;Name=RM588_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02395;old_locus_tag=RM588_02395
NZ_JAVRJR010000001.1	Protein Homology	CDS	452644	453441	.	+	0	ID=cds-WP_229717277.1;Parent=gene-RM588_RS02395;Dbxref=GenBank:WP_229717277.1;Name=WP_229717277.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613938.1;locus_tag=RM588_RS02395;product=ATP-binding protein;protein_id=WP_229717277.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	453453	455342	.	+	.	ID=gene-RM588_RS02400;Name=RM588_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02400;old_locus_tag=RM588_02400
NZ_JAVRJR010000001.1	Protein Homology	CDS	453453	455342	.	+	0	ID=cds-WP_105967296.1;Parent=gene-RM588_RS02400;Dbxref=GenBank:WP_105967296.1;Name=WP_105967296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275795.1;locus_tag=RM588_RS02400;product=vWA domain-containing protein;protein_id=WP_105967296.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	455463	456809	.	+	.	ID=gene-RM588_RS02405;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=RM588_RS02405;old_locus_tag=RM588_02405
NZ_JAVRJR010000001.1	Protein Homology	CDS	455463	456809	.	+	0	ID=cds-WP_037573621.1;Parent=gene-RM588_RS02405;Dbxref=GenBank:WP_037573621.1;Name=WP_037573621.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=RM588_RS02405;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_037573621.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	456945	458138	.	-	.	ID=gene-RM588_RS02410;Name=RM588_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02410;old_locus_tag=RM588_02410
NZ_JAVRJR010000001.1	Protein Homology	CDS	456945	458138	.	-	0	ID=cds-WP_037573619.1;Parent=gene-RM588_RS02410;Dbxref=GenBank:WP_037573619.1;Name=WP_037573619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499935.1;locus_tag=RM588_RS02410;product=toxic anion resistance protein;protein_id=WP_037573619.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	458135	458770	.	-	.	ID=gene-RM588_RS02415;Name=RM588_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02415;old_locus_tag=RM588_02415
NZ_JAVRJR010000001.1	Protein Homology	CDS	458135	458770	.	-	0	ID=cds-WP_037573617.1;Parent=gene-RM588_RS02415;Dbxref=GenBank:WP_037573617.1;Name=WP_037573617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425055.1;locus_tag=RM588_RS02415;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_037573617.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	458790	459059	.	-	.	ID=gene-RM588_RS02420;Name=RM588_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02420;old_locus_tag=RM588_02420
NZ_JAVRJR010000001.1	Protein Homology	CDS	458790	459059	.	-	0	ID=cds-WP_037573614.1;Parent=gene-RM588_RS02420;Dbxref=GenBank:WP_037573614.1;Name=WP_037573614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480918.1;locus_tag=RM588_RS02420;product=acylphosphatase;protein_id=WP_037573614.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	459395	459703	.	+	.	ID=gene-RM588_RS02425;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=RM588_RS02425;old_locus_tag=RM588_02425
NZ_JAVRJR010000001.1	Protein Homology	CDS	459395	459703	.	+	0	ID=cds-WP_037573611.1;Parent=gene-RM588_RS02425;Dbxref=GenBank:WP_037573611.1;Name=WP_037573611.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000269920.1;locus_tag=RM588_RS02425;product=regulatory protein MsaA;protein_id=WP_037573611.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	459882	460082	.	+	.	ID=gene-RM588_RS02430;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=RM588_RS02430;old_locus_tag=RM588_02430
NZ_JAVRJR010000001.1	Protein Homology	CDS	459882	460082	.	+	0	ID=cds-WP_001831260.1;Parent=gene-RM588_RS02430;Dbxref=GenBank:WP_001831260.1;Name=WP_001831260.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=RM588_RS02430;product=cold shock protein CspA;protein_id=WP_001831260.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	460336	461601	.	-	.	ID=gene-RM588_RS02435;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=RM588_RS02435;old_locus_tag=RM588_02435
NZ_JAVRJR010000001.1	Protein Homology	CDS	460336	461601	.	-	0	ID=cds-WP_103158857.1;Parent=gene-RM588_RS02435;Dbxref=GenBank:WP_103158857.1;Name=WP_103158857.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365009.1;locus_tag=RM588_RS02435;product=diaminopimelate decarboxylase;protein_id=WP_103158857.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	461598	462668	.	-	.	ID=gene-RM588_RS02440;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM588_RS02440;old_locus_tag=RM588_02440
NZ_JAVRJR010000001.1	Protein Homology	CDS	461598	462668	.	-	0	ID=cds-WP_119505177.1;Parent=gene-RM588_RS02440;Dbxref=GenBank:WP_119505177.1;Name=WP_119505177.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127604.1;locus_tag=RM588_RS02440;product=alanine racemase;protein_id=WP_119505177.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	462671	463819	.	-	.	ID=gene-RM588_RS02445;Name=RM588_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02445;old_locus_tag=RM588_02445
NZ_JAVRJR010000001.1	Protein Homology	CDS	462671	463819	.	-	0	ID=cds-WP_119505178.1;Parent=gene-RM588_RS02445;Dbxref=GenBank:WP_119505178.1;Name=WP_119505178.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453219.1;locus_tag=RM588_RS02445;product=M20 metallopeptidase family protein;protein_id=WP_119505178.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	464007	464726	.	-	.	ID=gene-RM588_RS02450;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=RM588_RS02450;old_locus_tag=RM588_02450
NZ_JAVRJR010000001.1	Protein Homology	CDS	464007	464726	.	-	0	ID=cds-WP_119505179.1;Parent=gene-RM588_RS02450;Dbxref=GenBank:WP_119505179.1;Name=WP_119505179.1;Ontology_term=GO:0009085,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499925.1;locus_tag=RM588_RS02450;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_119505179.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	464744	465466	.	-	.	ID=gene-RM588_RS02455;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=RM588_RS02455;old_locus_tag=RM588_02455
NZ_JAVRJR010000001.1	Protein Homology	CDS	464744	465466	.	-	0	ID=cds-WP_103158861.1;Parent=gene-RM588_RS02455;Dbxref=GenBank:WP_103158861.1;Name=WP_103158861.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478208.1;locus_tag=RM588_RS02455;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_103158861.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	465463	466341	.	-	.	ID=gene-RM588_RS02460;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=RM588_RS02460;old_locus_tag=RM588_02460
NZ_JAVRJR010000001.1	Protein Homology	CDS	465463	466341	.	-	0	ID=cds-WP_037573597.1;Parent=gene-RM588_RS02460;Dbxref=GenBank:WP_037573597.1;Name=WP_037573597.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303134.1;locus_tag=RM588_RS02460;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_037573597.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	466363	467346	.	-	.	ID=gene-RM588_RS02465;Name=RM588_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02465;old_locus_tag=RM588_02465
NZ_JAVRJR010000001.1	Protein Homology	CDS	466363	467346	.	-	0	ID=cds-WP_105996607.1;Parent=gene-RM588_RS02465;Dbxref=GenBank:WP_105996607.1;Name=WP_105996607.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase (NADP+) activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499922.1;locus_tag=RM588_RS02465;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_105996607.1;transl_table=11
NZ_JAVRJR010000001.1	cmsearch	riboswitch	467465	467641	.	-	.	ID=id-NZ_JAVRJR010000001.1:467465..467641;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00168,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000001.1	RefSeq	gene	467803	469410	.	-	.	ID=gene-RM588_RS02470;Name=RM588_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02470;old_locus_tag=RM588_02470
NZ_JAVRJR010000001.1	Protein Homology	CDS	467803	469410	.	-	0	ID=cds-WP_037573587.1;Parent=gene-RM588_RS02470;Dbxref=GenBank:WP_037573587.1;Name=WP_037573587.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167717.1;locus_tag=RM588_RS02470;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_037573587.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	469567	470472	.	+	.	ID=gene-RM588_RS02475;Name=RM588_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02475;old_locus_tag=RM588_02475
NZ_JAVRJR010000001.1	Protein Homology	CDS	469567	470472	.	+	0	ID=cds-WP_105965280.1;Parent=gene-RM588_RS02475;Dbxref=GenBank:WP_105965280.1;Name=WP_105965280.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167718.1;locus_tag=RM588_RS02475;product=CvfB family protein;protein_id=WP_105965280.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	470529	471473	.	-	.	ID=gene-RM588_RS02480;Name=RM588_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02480;old_locus_tag=RM588_02480
NZ_JAVRJR010000001.1	Protein Homology	CDS	470529	471473	.	-	0	ID=cds-WP_157946138.1;Parent=gene-RM588_RS02480;Dbxref=GenBank:WP_157946138.1;Name=WP_157946138.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:TIGR03168.1;locus_tag=RM588_RS02480;product=1-phosphofructokinase family hexose kinase;protein_id=WP_157946138.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	471617	473428	.	-	.	ID=gene-RM588_RS02485;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM588_RS02485;old_locus_tag=RM588_02485
NZ_JAVRJR010000001.1	Protein Homology	CDS	471617	473428	.	-	0	ID=cds-WP_107371674.1;Parent=gene-RM588_RS02485;Dbxref=GenBank:WP_107371674.1;Name=WP_107371674.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507656.1;locus_tag=RM588_RS02485;product=oligoendopeptidase F;protein_id=WP_107371674.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	473559	473882	.	+	.	ID=gene-RM588_RS02490;Name=RM588_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02490;old_locus_tag=RM588_02490
NZ_JAVRJR010000001.1	Protein Homology	CDS	473559	473882	.	+	0	ID=cds-WP_107371675.1;Parent=gene-RM588_RS02490;Dbxref=GenBank:WP_107371675.1;Name=WP_107371675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167722.1;locus_tag=RM588_RS02490;product=hypothetical protein;protein_id=WP_107371675.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	474417	475676	.	-	.	ID=gene-RM588_RS02495;Name=RM588_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02495;old_locus_tag=RM588_02495
NZ_JAVRJR010000001.1	Protein Homology	CDS	474417	475676	.	-	0	ID=cds-WP_103158868.1;Parent=gene-RM588_RS02495;Dbxref=GenBank:WP_103158868.1;Name=WP_103158868.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=RM588_RS02495;product=aminoacyltransferase;protein_id=WP_103158868.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	475701	476960	.	-	.	ID=gene-RM588_RS02500;Name=RM588_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02500;old_locus_tag=RM588_02500
NZ_JAVRJR010000001.1	Protein Homology	CDS	475701	476960	.	-	0	ID=cds-WP_037573569.1;Parent=gene-RM588_RS02500;Dbxref=GenBank:WP_037573569.1;Name=WP_037573569.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468762.1;locus_tag=RM588_RS02500;product=aminoacyltransferase;protein_id=WP_037573569.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	477475	478569	.	+	.	ID=gene-RM588_RS02505;Name=RM588_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02505;old_locus_tag=RM588_02505
NZ_JAVRJR010000001.1	Protein Homology	CDS	477475	478569	.	+	0	ID=cds-WP_105962806.1;Parent=gene-RM588_RS02505;Dbxref=GenBank:WP_105962806.1;Name=WP_105962806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483353.1;locus_tag=RM588_RS02505;product=prephenate dehydrogenase;protein_id=WP_105962806.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	478702	479964	.	-	.	ID=gene-RM588_RS02510;Name=RM588_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02510;old_locus_tag=RM588_02510
NZ_JAVRJR010000001.1	Protein Homology	CDS	478702	479964	.	-	0	ID=cds-WP_311548065.1;Parent=gene-RM588_RS02510;Dbxref=GenBank:WP_311548065.1;Name=WP_311548065.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636417.1;locus_tag=RM588_RS02510;product=Y-family DNA polymerase;protein_id=WP_311548065.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	480118	480528	.	-	.	ID=gene-RM588_RS02515;Name=RM588_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02515;old_locus_tag=RM588_02515
NZ_JAVRJR010000001.1	Protein Homology	CDS	480118	480528	.	-	0	ID=cds-WP_037573563.1;Parent=gene-RM588_RS02515;Dbxref=GenBank:WP_037573563.1;Name=WP_037573563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613965.1;locus_tag=RM588_RS02515;product=sporulation protein;protein_id=WP_037573563.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	480671	480856	.	+	.	ID=gene-RM588_RS02520;Name=thmT;gbkey=Gene;gene=thmT;gene_biotype=protein_coding;locus_tag=RM588_RS02520;old_locus_tag=RM588_02520
NZ_JAVRJR010000001.1	Protein Homology	CDS	480671	480856	.	+	0	ID=cds-WP_037573561.1;Parent=gene-RM588_RS02520;Dbxref=GenBank:WP_037573561.1;Name=WP_037573561.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;gene=thmT;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=RM588_RS02520;product=2-hydroxymuconate tautomerase;protein_id=WP_037573561.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	480896	481861	.	-	.	ID=gene-RM588_RS02525;Name=RM588_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02525;old_locus_tag=RM588_02525
NZ_JAVRJR010000001.1	Protein Homology	CDS	480896	481861	.	-	0	ID=cds-WP_037573559.1;Parent=gene-RM588_RS02525;Dbxref=GenBank:WP_037573559.1;Name=WP_037573559.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499888.1;locus_tag=RM588_RS02525;product=LCP family protein;protein_id=WP_037573559.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	482005	482520	.	+	.	ID=gene-RM588_RS02530;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM588_RS02530;old_locus_tag=RM588_02530
NZ_JAVRJR010000001.1	Protein Homology	CDS	482005	482520	.	+	0	ID=cds-WP_037573557.1;Parent=gene-RM588_RS02530;Dbxref=GenBank:WP_037573557.1;Name=WP_037573557.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497837.1;locus_tag=RM588_RS02530;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_037573557.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	482713	485232	.	-	.	ID=gene-RM588_RS02535;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=RM588_RS02535;old_locus_tag=RM588_02535
NZ_JAVRJR010000001.1	Protein Homology	CDS	482713	485232	.	-	0	ID=cds-WP_103158875.1;Parent=gene-RM588_RS02535;Dbxref=GenBank:WP_103158875.1;Name=WP_103158875.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275840.1;locus_tag=RM588_RS02535;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_103158875.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	485416	486639	.	-	.	ID=gene-RM588_RS02540;Name=RM588_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02540;old_locus_tag=RM588_02540
NZ_JAVRJR010000001.1	Protein Homology	CDS	485416	486639	.	-	0	ID=cds-WP_037573552.1;Parent=gene-RM588_RS02540;Dbxref=GenBank:WP_037573552.1;Name=WP_037573552.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499885.1;locus_tag=RM588_RS02540;product=AI-2E family transporter;protein_id=WP_037573552.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	486849	488891	.	-	.	ID=gene-RM588_RS02545;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=RM588_RS02545;old_locus_tag=RM588_02545
NZ_JAVRJR010000001.1	Protein Homology	CDS	486849	488891	.	-	0	ID=cds-WP_037573549.1;Parent=gene-RM588_RS02545;Dbxref=GenBank:WP_037573549.1;Name=WP_037573549.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167733.1;locus_tag=RM588_RS02545;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_037573549.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	489000	489851	.	-	.	ID=gene-RM588_RS02550;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=RM588_RS02550;old_locus_tag=RM588_02550
NZ_JAVRJR010000001.1	Protein Homology	CDS	489000	489851	.	-	0	ID=cds-WP_037573547.1;Parent=gene-RM588_RS02550;Dbxref=GenBank:WP_037573547.1;Name=WP_037573547.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613972.1;locus_tag=RM588_RS02550;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_037573547.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	490015	491484	.	-	.	ID=gene-RM588_RS02555;Name=alsT;gbkey=Gene;gene=alsT;gene_biotype=protein_coding;locus_tag=RM588_RS02555;old_locus_tag=RM588_02555
NZ_JAVRJR010000001.1	Protein Homology	CDS	490015	491484	.	-	0	ID=cds-WP_037573545.1;Parent=gene-RM588_RS02555;Dbxref=GenBank:WP_037573545.1;Name=WP_037573545.1;gbkey=CDS;gene=alsT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499882.1;locus_tag=RM588_RS02555;product=glutamine transporter AlsT;protein_id=WP_037573545.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	491574	494000	.	-	.	ID=gene-RM588_RS02560;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=RM588_RS02560;old_locus_tag=RM588_02560
NZ_JAVRJR010000001.1	Protein Homology	CDS	491574	494000	.	-	0	ID=cds-WP_105967293.1;Parent=gene-RM588_RS02560;Dbxref=GenBank:WP_105967293.1;Name=WP_105967293.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166554.1;locus_tag=RM588_RS02560;product=DNA topoisomerase IV subunit A;protein_id=WP_105967293.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	494000	495994	.	-	.	ID=gene-RM588_RS02565;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=RM588_RS02565;old_locus_tag=RM588_02565
NZ_JAVRJR010000001.1	Protein Homology	CDS	494000	495994	.	-	0	ID=cds-WP_105962800.1;Parent=gene-RM588_RS02565;Dbxref=GenBank:WP_105962800.1;Name=WP_105962800.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613975.1;locus_tag=RM588_RS02565;product=DNA topoisomerase IV subunit B;protein_id=WP_105962800.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	496208	496789	.	+	.	ID=gene-RM588_RS02570;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=RM588_RS02570;old_locus_tag=RM588_02570
NZ_JAVRJR010000001.1	Protein Homology	CDS	496208	496789	.	+	0	ID=cds-WP_105965273.1;Parent=gene-RM588_RS02570;Dbxref=GenBank:WP_105965273.1;Name=WP_105965273.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=RM588_RS02570;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_105965273.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	496873	497172	.	+	.	ID=gene-RM588_RS02575;Name=RM588_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02575;old_locus_tag=RM588_02575
NZ_JAVRJR010000001.1	Protein Homology	CDS	496873	497172	.	+	0	ID=cds-WP_311548066.1;Parent=gene-RM588_RS02575;Dbxref=GenBank:WP_311548066.1;Name=WP_311548066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499877.1;locus_tag=RM588_RS02575;product=HesB/YadR/YfhF family protein;protein_id=WP_311548066.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	497327	497779	.	-	.	ID=gene-RM588_RS02580;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=RM588_RS02580;old_locus_tag=RM588_02580
NZ_JAVRJR010000001.1	Protein Homology	CDS	497327	497779	.	-	0	ID=cds-WP_037573533.1;Parent=gene-RM588_RS02580;Dbxref=GenBank:WP_037573533.1;Name=WP_037573533.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831194.1;locus_tag=RM588_RS02580;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_037573533.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	497969	500671	.	-	.	ID=gene-RM588_RS02585;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=RM588_RS02585;old_locus_tag=RM588_02585
NZ_JAVRJR010000001.1	Protein Homology	CDS	497969	500671	.	-	0	ID=cds-WP_037573531.1;Parent=gene-RM588_RS02585;Dbxref=GenBank:WP_037573531.1;Name=WP_037573531.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613979.1;locus_tag=RM588_RS02585;product=aconitate hydratase AcnA;protein_id=WP_037573531.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	500948	502582	.	-	.	ID=gene-RM588_RS02590;Name=RM588_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02590;old_locus_tag=RM588_02590
NZ_JAVRJR010000001.1	Protein Homology	CDS	500948	502582	.	-	0	ID=cds-WP_103158881.1;Parent=gene-RM588_RS02590;Dbxref=GenBank:WP_103158881.1;Name=WP_103158881.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613980.1;locus_tag=RM588_RS02590;product=BCCT family transporter;protein_id=WP_103158881.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	502827	503192	.	+	.	ID=gene-RM588_RS02595;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=RM588_RS02595;old_locus_tag=RM588_02595
NZ_JAVRJR010000001.1	Protein Homology	CDS	502827	503192	.	+	0	ID=cds-WP_037573524.1;Parent=gene-RM588_RS02595;Dbxref=GenBank:WP_037573524.1;Name=WP_037573524.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480859.1;locus_tag=RM588_RS02595;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_037573524.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	503458	506490	.	-	.	ID=gene-RM588_RS02600;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=RM588_RS02600;old_locus_tag=RM588_02600
NZ_JAVRJR010000001.1	Protein Homology	CDS	503458	506490	.	-	0	ID=cds-WP_103158882.1;Parent=gene-RM588_RS02600;Dbxref=GenBank:WP_103158882.1;Name=WP_103158882.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF041751.2;locus_tag=RM588_RS02600;product=exonuclease subunit SbcC;protein_id=WP_103158882.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	506492	507610	.	-	.	ID=gene-RM588_RS02605;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=RM588_RS02605;old_locus_tag=RM588_02605
NZ_JAVRJR010000001.1	Protein Homology	CDS	506492	507610	.	-	0	ID=cds-WP_037573512.1;Parent=gene-RM588_RS02605;Dbxref=GenBank:WP_037573512.1;Name=WP_037573512.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613983.1;locus_tag=RM588_RS02605;product=exonuclease subunit SbcD;protein_id=WP_037573512.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	507755	508228	.	-	.	ID=gene-RM588_RS02610;Name=RM588_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02610;old_locus_tag=RM588_02610
NZ_JAVRJR010000001.1	Protein Homology	CDS	507755	508228	.	-	0	ID=cds-WP_037573510.1;Parent=gene-RM588_RS02610;Dbxref=GenBank:WP_037573510.1;Name=WP_037573510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165384.1;locus_tag=RM588_RS02610;product=CcdC family protein;protein_id=WP_037573510.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	508408	508635	.	-	.	ID=gene-RM588_RS02615;Name=RM588_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02615;old_locus_tag=RM588_02615
NZ_JAVRJR010000001.1	Protein Homology	CDS	508408	508635	.	-	0	ID=cds-WP_210433439.1;Parent=gene-RM588_RS02615;Dbxref=GenBank:WP_210433439.1;Name=WP_210433439.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613986.1;locus_tag=RM588_RS02615;product=YneF family protein;protein_id=WP_210433439.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	508903	510891	.	-	.	ID=gene-RM588_RS02620;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=RM588_RS02620;old_locus_tag=RM588_02620
NZ_JAVRJR010000001.1	Protein Homology	CDS	508903	510891	.	-	0	ID=cds-WP_105962797.1;Parent=gene-RM588_RS02620;Dbxref=GenBank:WP_105962797.1;Name=WP_105962797.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001661967.1;locus_tag=RM588_RS02620;product=transketolase;protein_id=WP_105962797.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	510971	511210	.	-	.	ID=gene-RM588_RS02625;Name=RM588_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02625;old_locus_tag=RM588_02625
NZ_JAVRJR010000001.1	Protein Homology	CDS	510971	511210	.	-	0	ID=cds-WP_037573504.1;Parent=gene-RM588_RS02625;Dbxref=GenBank:WP_037573504.1;Name=WP_037573504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442718.1;locus_tag=RM588_RS02625;product=DUF896 domain-containing protein;protein_id=WP_037573504.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	511439	511663	.	-	.	ID=gene-RM588_RS02630;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=RM588_RS02630;old_locus_tag=RM588_02630
NZ_JAVRJR010000001.1	Protein Homology	CDS	511439	511663	.	-	0	ID=cds-WP_037573496.1;Parent=gene-RM588_RS02630;Dbxref=GenBank:WP_037573496.1;Name=WP_037573496.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220332.1;locus_tag=RM588_RS02630;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_037573496.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	511807	512430	.	+	.	ID=gene-RM588_RS02635;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=RM588_RS02635;old_locus_tag=RM588_02635
NZ_JAVRJR010000001.1	Protein Homology	CDS	511807	512430	.	+	0	ID=cds-WP_037573494.1;Parent=gene-RM588_RS02635;Dbxref=GenBank:WP_037573494.1;Name=WP_037573494.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=RM588_RS02635;product=transcriptional repressor LexA;protein_id=WP_037573494.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	512682	513614	.	-	.	ID=gene-RM588_RS02640;Name=RM588_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02640;old_locus_tag=RM588_02640
NZ_JAVRJR010000001.1	Protein Homology	CDS	512682	513614	.	-	0	ID=cds-WP_105962796.1;Parent=gene-RM588_RS02640;Dbxref=GenBank:WP_105962796.1;Name=WP_105962796.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167752.1;locus_tag=RM588_RS02640;product=CAP domain-containing protein;protein_id=WP_105962796.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	513708	514685	.	-	.	ID=gene-RM588_RS02645;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=RM588_RS02645;old_locus_tag=RM588_02645
NZ_JAVRJR010000001.1	Protein Homology	CDS	513708	514685	.	-	0	ID=cds-WP_037573492.1;Parent=gene-RM588_RS02645;Dbxref=GenBank:WP_037573492.1;Name=WP_037573492.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=RM588_RS02645;product=GMP reductase;protein_id=WP_037573492.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	514761	515030	.	-	.	ID=gene-RM588_RS02650;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=RM588_RS02650;old_locus_tag=RM588_02650
NZ_JAVRJR010000001.1	Protein Homology	CDS	514761	515030	.	-	0	ID=cds-WP_037573490.1;Parent=gene-RM588_RS02650;Dbxref=GenBank:WP_037573490.1;Name=WP_037573490.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=RM588_RS02650;product=30S ribosomal protein S14;protein_id=WP_037573490.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	515218	515367	.	+	.	ID=gene-RM588_RS02655;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM588_RS02655;old_locus_tag=RM588_02655
NZ_JAVRJR010000001.1	Protein Homology	CDS	515218	515367	.	+	0	ID=cds-WP_014613994.1;Parent=gene-RM588_RS02655;Dbxref=GenBank:WP_014613994.1;Name=WP_014613994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM588_RS02655;product=50S ribosomal protein L33;protein_id=WP_014613994.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	515505	517001	.	-	.	ID=gene-RM588_RS02660;Name=RM588_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02660;old_locus_tag=RM588_02660
NZ_JAVRJR010000001.1	Protein Homology	CDS	515505	517001	.	-	0	ID=cds-WP_037573488.1;Parent=gene-RM588_RS02660;Dbxref=GenBank:WP_037573488.1;Name=WP_037573488.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612796.1;locus_tag=RM588_RS02660;product=catalase;protein_id=WP_037573488.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	517209	518666	.	+	.	ID=gene-RM588_RS02665;Name=RM588_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02665;old_locus_tag=RM588_02665
NZ_JAVRJR010000001.1	Protein Homology	CDS	517209	518666	.	+	0	ID=cds-WP_105962795.1;Parent=gene-RM588_RS02665;Dbxref=GenBank:WP_105962795.1;Name=WP_105962795.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900224.1;locus_tag=RM588_RS02665;product=amino acid permease;protein_id=WP_105962795.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	518782	519096	.	+	.	ID=gene-RM588_RS02670;Name=RM588_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02670;old_locus_tag=RM588_02670
NZ_JAVRJR010000001.1	Protein Homology	CDS	518782	519096	.	+	0	ID=cds-WP_037573482.1;Parent=gene-RM588_RS02670;Dbxref=GenBank:WP_037573482.1;Name=WP_037573482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830950.1;locus_tag=RM588_RS02670;product=hypothetical protein;protein_id=WP_037573482.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	519157	519957	.	-	.	ID=gene-RM588_RS02675;Name=RM588_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02675;old_locus_tag=RM588_02675
NZ_JAVRJR010000001.1	Protein Homology	CDS	519157	519957	.	-	0	ID=cds-WP_037573479.1;Parent=gene-RM588_RS02675;Dbxref=GenBank:WP_037573479.1;Name=WP_037573479.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167756.1;locus_tag=RM588_RS02675;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037573479.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	520061	520978	.	-	.	ID=gene-RM588_RS02680;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=RM588_RS02680;old_locus_tag=RM588_02680
NZ_JAVRJR010000001.1	Protein Homology	CDS	520061	520978	.	-	0	ID=cds-WP_165806224.1;Parent=gene-RM588_RS02680;Dbxref=GenBank:WP_165806224.1;Name=WP_165806224.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507779.1;locus_tag=RM588_RS02680;product=homoserine kinase;protein_id=WP_165806224.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	520978	522042	.	-	.	ID=gene-RM588_RS02685;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=RM588_RS02685;old_locus_tag=RM588_02685
NZ_JAVRJR010000001.1	Protein Homology	CDS	520978	522042	.	-	0	ID=cds-WP_311548067.1;Parent=gene-RM588_RS02685;Dbxref=GenBank:WP_311548067.1;Name=WP_311548067.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165396.1;locus_tag=RM588_RS02685;product=threonine synthase;protein_id=WP_311548067.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	522048	523331	.	-	.	ID=gene-RM588_RS02690;Name=RM588_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02690;old_locus_tag=RM588_02690
NZ_JAVRJR010000001.1	Protein Homology	CDS	522048	523331	.	-	0	ID=cds-WP_107363905.1;Parent=gene-RM588_RS02690;Dbxref=GenBank:WP_107363905.1;Name=WP_107363905.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614000.1;locus_tag=RM588_RS02690;product=homoserine dehydrogenase;protein_id=WP_107363905.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	523522	524871	.	+	.	ID=gene-RM588_RS02695;Name=RM588_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02695;old_locus_tag=RM588_02695
NZ_JAVRJR010000001.1	Protein Homology	CDS	523522	524871	.	+	0	ID=cds-WP_037573465.1;Parent=gene-RM588_RS02695;Dbxref=GenBank:WP_037573465.1;Name=WP_037573465.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167760.1;locus_tag=RM588_RS02695;product=aspartate kinase;protein_id=WP_037573465.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	525023	525613	.	-	.	ID=gene-RM588_RS02700;Name=RM588_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02700;old_locus_tag=RM588_02700
NZ_JAVRJR010000001.1	Protein Homology	CDS	525023	525613	.	-	0	ID=cds-WP_311548068.1;Parent=gene-RM588_RS02700;Dbxref=GenBank:WP_311548068.1;Name=WP_311548068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424990.1;locus_tag=RM588_RS02700;product=hypothetical protein;protein_id=WP_311548068.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	526124	526489	.	+	.	ID=gene-RM588_RS02705;Name=RM588_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02705;old_locus_tag=RM588_02705
NZ_JAVRJR010000001.1	Protein Homology	CDS	526124	526489	.	+	0	ID=cds-WP_037573462.1;Parent=gene-RM588_RS02705;Dbxref=GenBank:WP_037573462.1;Name=WP_037573462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384374.1;locus_tag=RM588_RS02705;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037573462.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	526695	527201	.	-	.	ID=gene-RM588_RS02710;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=RM588_RS02710;old_locus_tag=RM588_02710
NZ_JAVRJR010000001.1	Protein Homology	CDS	526695	527201	.	-	0	ID=cds-WP_037573459.1;Parent=gene-RM588_RS02710;Dbxref=GenBank:WP_037573459.1;Name=WP_037573459.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165402.1;locus_tag=RM588_RS02710;product=thermonuclease NucI;protein_id=WP_037573459.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	527345	527554	.	+	.	ID=gene-RM588_RS02715;Name=RM588_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02715;old_locus_tag=RM588_02715
NZ_JAVRJR010000001.1	Protein Homology	CDS	527345	527554	.	+	0	ID=cds-WP_037573457.1;Parent=gene-RM588_RS02715;Dbxref=GenBank:WP_037573457.1;Name=WP_037573457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165403.1;locus_tag=RM588_RS02715;product=hypothetical protein;protein_id=WP_037573457.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	527656	528258	.	-	.	ID=gene-RM588_RS02720;Name=RM588_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02720;old_locus_tag=RM588_02720
NZ_JAVRJR010000001.1	Protein Homology	CDS	527656	528258	.	-	0	ID=cds-WP_103159573.1;Parent=gene-RM588_RS02720;Dbxref=GenBank:WP_103159573.1;Name=WP_103159573.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000624458.1;locus_tag=RM588_RS02720;product=response regulator transcription factor;protein_id=WP_103159573.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	528255	529346	.	-	.	ID=gene-RM588_RS02725;Name=RM588_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02725;old_locus_tag=RM588_02725
NZ_JAVRJR010000001.1	Protein Homology	CDS	528255	529346	.	-	0	ID=cds-WP_233655855.1;Parent=gene-RM588_RS02725;Dbxref=GenBank:WP_233655855.1;Name=WP_233655855.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF019350.7;locus_tag=RM588_RS02725;product=sensor histidine kinase;protein_id=WP_233655855.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	529336	530073	.	-	.	ID=gene-RM588_RS02730;Name=RM588_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02730;old_locus_tag=RM588_02730
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	529336	530073	.	-	0	ID=cds-WP_105996619.1;Parent=gene-RM588_RS02730;Dbxref=GenBank:WP_105996619.1;Name=WP_105996619.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS02730;product=ABC transporter permease;protein_id=WP_105996619.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	530107	530724	.	-	.	ID=gene-RM588_RS02735;Name=RM588_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02735;old_locus_tag=RM588_02735
NZ_JAVRJR010000001.1	Protein Homology	CDS	530107	530724	.	-	0	ID=cds-WP_105996620.1;Parent=gene-RM588_RS02735;Dbxref=GenBank:WP_105996620.1;Name=WP_105996620.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM588_RS02735;product=ABC transporter ATP-binding protein;protein_id=WP_105996620.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	530908	531120	.	-	.	ID=gene-RM588_RS02740;Name=RM588_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02740;old_locus_tag=RM588_02740
NZ_JAVRJR010000001.1	Protein Homology	CDS	530908	531120	.	-	0	ID=cds-WP_037573449.1;Parent=gene-RM588_RS02740;Dbxref=GenBank:WP_037573449.1;Name=WP_037573449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997672.1;locus_tag=RM588_RS02740;product=Trp family transcriptional regulator;protein_id=WP_037573449.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	531339	531398	.	+	.	ID=gene-RM588_RS11295;Name=RM588_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11295
NZ_JAVRJR010000001.1	Protein Homology	CDS	531339	531398	.	+	0	ID=cds-WP_105965347.1;Parent=gene-RM588_RS11295;Dbxref=GenBank:WP_105965347.1;Name=WP_105965347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=RM588_RS11295;product=epsilon family phenol-soluble modulin;protein_id=WP_105965347.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	532611	533951	.	-	.	ID=gene-RM588_RS02745;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=RM588_RS02745;old_locus_tag=RM588_02745
NZ_JAVRJR010000001.1	Protein Homology	CDS	532611	533951	.	-	0	ID=cds-WP_107367230.1;Parent=gene-RM588_RS02745;Dbxref=GenBank:WP_107367230.1;Name=WP_107367230.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=RM588_RS02745;product=type I glutamate--ammonia ligase;protein_id=WP_107367230.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	533974	534339	.	-	.	ID=gene-RM588_RS02750;Name=RM588_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02750;old_locus_tag=RM588_02750
NZ_JAVRJR010000001.1	Protein Homology	CDS	533974	534339	.	-	0	ID=cds-WP_037573443.1;Parent=gene-RM588_RS02750;Dbxref=GenBank:WP_037573443.1;Name=WP_037573443.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463893.1;locus_tag=RM588_RS02750;product=MerR family transcriptional regulator;protein_id=WP_037573443.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	534459	535697	.	-	.	ID=gene-RM588_RS02755;Name=RM588_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02755;old_locus_tag=RM588_02755
NZ_JAVRJR010000001.1	Protein Homology	CDS	534459	535697	.	-	0	ID=cds-WP_105962791.1;Parent=gene-RM588_RS02755;Dbxref=GenBank:WP_105962791.1;Name=WP_105962791.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448823.1;locus_tag=RM588_RS02755;product=methionine gamma-lyase family protein;protein_id=WP_105962791.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	535712	536944	.	-	.	ID=gene-RM588_RS02760;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=RM588_RS02760;old_locus_tag=RM588_02760
NZ_JAVRJR010000001.1	Protein Homology	CDS	535712	536944	.	-	0	ID=cds-WP_103158840.1;Parent=gene-RM588_RS02760;Dbxref=GenBank:WP_103158840.1;Name=WP_103158840.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381825.1;locus_tag=RM588_RS02760;product=GTPase HflX;protein_id=WP_103158840.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	537066	537539	.	+	.	ID=gene-RM588_RS02765;Name=RM588_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02765;old_locus_tag=RM588_02765
NZ_JAVRJR010000001.1	Protein Homology	CDS	537066	537539	.	+	0	ID=cds-WP_037573439.1;Parent=gene-RM588_RS02765;Dbxref=GenBank:WP_037573439.1;Name=WP_037573439.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614023.1;locus_tag=RM588_RS02765;product=glutathione peroxidase;protein_id=WP_037573439.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	537662	537868	.	-	.	ID=gene-RM588_RS02770;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=RM588_RS02770;old_locus_tag=RM588_02770
NZ_JAVRJR010000001.1	Protein Homology	CDS	537662	537868	.	-	0	ID=cds-WP_037573438.1;Parent=gene-RM588_RS02770;Dbxref=GenBank:WP_037573438.1;Name=WP_037573438.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614028.1;locus_tag=RM588_RS02770;product=RNA chaperone Hfq;protein_id=WP_037573438.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	537884	538819	.	-	.	ID=gene-RM588_RS02775;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=RM588_RS02775;old_locus_tag=RM588_02775
NZ_JAVRJR010000001.1	Protein Homology	CDS	537884	538819	.	-	0	ID=cds-WP_037573964.1;Parent=gene-RM588_RS02775;Dbxref=GenBank:WP_037573964.1;Name=WP_037573964.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499812.1;locus_tag=RM588_RS02775;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_037573964.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	538821	539756	.	-	.	ID=gene-RM588_RS02780;Name=RM588_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02780;old_locus_tag=RM588_02780
NZ_JAVRJR010000001.1	Protein Homology	CDS	538821	539756	.	-	0	ID=cds-WP_103158842.1;Parent=gene-RM588_RS02780;Dbxref=GenBank:WP_103158842.1;Name=WP_103158842.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165425.1;locus_tag=RM588_RS02780;product=alpha/beta hydrolase;protein_id=WP_103158842.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	540045	541718	.	-	.	ID=gene-RM588_RS02785;Name=RM588_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02785;old_locus_tag=RM588_02785
NZ_JAVRJR010000001.1	Protein Homology	CDS	540045	541718	.	-	0	ID=cds-WP_037573436.1;Parent=gene-RM588_RS02785;Dbxref=GenBank:WP_037573436.1;Name=WP_037573436.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900199.1;locus_tag=RM588_RS02785;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_037573436.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	541842	543344	.	-	.	ID=gene-RM588_RS02790;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=RM588_RS02790;old_locus_tag=RM588_02790
NZ_JAVRJR010000001.1	Protein Homology	CDS	541842	543344	.	-	0	ID=cds-WP_037573435.1;Parent=gene-RM588_RS02790;Dbxref=GenBank:WP_037573435.1;Name=WP_037573435.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176556.1;locus_tag=RM588_RS02790;product=glycerol kinase GlpK;protein_id=WP_037573435.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	543430	544245	.	-	.	ID=gene-RM588_RS02795;Name=RM588_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02795;old_locus_tag=RM588_02795
NZ_JAVRJR010000001.1	Protein Homology	CDS	543430	544245	.	-	0	ID=cds-WP_037573429.1;Parent=gene-RM588_RS02795;Dbxref=GenBank:WP_037573429.1;Name=WP_037573429.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424956.1;locus_tag=RM588_RS02795;product=MIP/aquaporin family protein;protein_id=WP_037573429.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	544461	545489	.	-	.	ID=gene-RM588_RS02800;Name=RM588_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02800;old_locus_tag=RM588_02800
NZ_JAVRJR010000001.1	Protein Homology	CDS	544461	545489	.	-	0	ID=cds-WP_308460853.1;Parent=gene-RM588_RS02800;Dbxref=GenBank:WP_308460853.1;Name=WP_308460853.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424955.1;locus_tag=RM588_RS02800;product=S66 family peptidase;protein_id=WP_308460853.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	545513	546046	.	-	.	ID=gene-RM588_RS02805;Name=RM588_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02805;old_locus_tag=RM588_02805
NZ_JAVRJR010000001.1	Protein Homology	CDS	545513	546046	.	-	0	ID=cds-WP_037573427.1;Parent=gene-RM588_RS02805;Dbxref=GenBank:WP_037573427.1;Name=WP_037573427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=RM588_RS02805;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_037573427.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	546059	548050	.	-	.	ID=gene-RM588_RS02810;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=RM588_RS02810;old_locus_tag=RM588_02810
NZ_JAVRJR010000001.1	Protein Homology	CDS	546059	548050	.	-	0	ID=cds-WP_037573425.1;Parent=gene-RM588_RS02810;Dbxref=GenBank:WP_037573425.1;Name=WP_037573425.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:NF000950.0;locus_tag=RM588_RS02810;product=DNA mismatch repair endonuclease MutL;protein_id=WP_037573425.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	548067	550664	.	-	.	ID=gene-RM588_RS02815;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=RM588_RS02815;old_locus_tag=RM588_02815
NZ_JAVRJR010000001.1	Protein Homology	CDS	548067	550664	.	-	0	ID=cds-WP_037573423.1;Parent=gene-RM588_RS02815;Dbxref=GenBank:WP_037573423.1;Name=WP_037573423.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR01070.1;locus_tag=RM588_RS02815;product=DNA mismatch repair protein MutS;protein_id=WP_037573423.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	550803	551312	.	-	.	ID=gene-RM588_RS02820;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=RM588_RS02820;old_locus_tag=RM588_02820
NZ_JAVRJR010000001.1	Protein Homology	CDS	550803	551312	.	-	0	ID=cds-WP_037573420.1;Parent=gene-RM588_RS02820;Dbxref=GenBank:WP_037573420.1;Name=WP_037573420.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424951.1;locus_tag=RM588_RS02820;product=energy coupling factor transporter S component ThiW;protein_id=WP_037573420.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	551317	551697	.	-	.	ID=gene-RM588_RS02825;Name=RM588_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02825;old_locus_tag=RM588_02825
NZ_JAVRJR010000001.1	Protein Homology	CDS	551317	551697	.	-	0	ID=cds-WP_037573418.1;Parent=gene-RM588_RS02825;Dbxref=GenBank:WP_037573418.1;Name=WP_037573418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165436.1;locus_tag=RM588_RS02825;product=YlbF family regulator;protein_id=WP_037573418.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	551697	553238	.	-	.	ID=gene-RM588_RS02830;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=RM588_RS02830;old_locus_tag=RM588_02830
NZ_JAVRJR010000001.1	Protein Homology	CDS	551697	553238	.	-	0	ID=cds-WP_037573416.1;Parent=gene-RM588_RS02830;Dbxref=GenBank:WP_037573416.1;Name=WP_037573416.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167791.1;locus_tag=RM588_RS02830;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_037573416.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	553377	553673	.	-	.	ID=gene-RM588_RS02835;Name=RM588_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02835;old_locus_tag=RM588_02835
NZ_JAVRJR010000001.1	Protein Homology	CDS	553377	553673	.	-	0	ID=cds-WP_037573414.1;Parent=gene-RM588_RS02835;Dbxref=GenBank:WP_037573414.1;Name=WP_037573414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453122.1;locus_tag=RM588_RS02835;product=thiamine-binding protein;protein_id=WP_037573414.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	553747	554613	.	-	.	ID=gene-RM588_RS02840;Name=RM588_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02840;old_locus_tag=RM588_02840
NZ_JAVRJR010000001.1	Protein Homology	CDS	553747	554613	.	-	0	ID=cds-WP_311548069.1;Parent=gene-RM588_RS02840;Dbxref=GenBank:WP_311548069.1;Name=WP_311548069.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=RM588_RS02840;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_311548069.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	554614	556371	.	-	.	ID=gene-RM588_RS02845;Name=RM588_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02845;old_locus_tag=RM588_02845
NZ_JAVRJR010000001.1	Protein Homology	CDS	554614	556371	.	-	0	ID=cds-WP_037573412.1;Parent=gene-RM588_RS02845;Dbxref=GenBank:WP_037573412.1;Name=WP_037573412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=RM588_RS02845;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_037573412.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	556484	557275	.	-	.	ID=gene-RM588_RS02850;Name=RM588_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02850;old_locus_tag=RM588_02850
NZ_JAVRJR010000001.1	Protein Homology	CDS	556484	557275	.	-	0	ID=cds-WP_037573411.1;Parent=gene-RM588_RS02850;Dbxref=GenBank:WP_037573411.1;Name=WP_037573411.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275911.1;locus_tag=RM588_RS02850;product=TIGR00282 family metallophosphoesterase;protein_id=WP_037573411.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	557381	559522	.	-	.	ID=gene-RM588_RS02855;Name=RM588_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02855;old_locus_tag=RM588_02855
NZ_JAVRJR010000001.1	Protein Homology	CDS	557381	559522	.	-	0	ID=cds-WP_037573410.1;Parent=gene-RM588_RS02855;Dbxref=GenBank:WP_037573410.1;Name=WP_037573410.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165442.1;locus_tag=RM588_RS02855;product=heavy metal translocating P-type ATPase;protein_id=WP_037573410.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	559500	559886	.	-	.	ID=gene-RM588_RS02860;Name=RM588_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02860;old_locus_tag=RM588_02860
NZ_JAVRJR010000001.1	Protein Homology	CDS	559500	559886	.	-	0	ID=cds-WP_037573409.1;Parent=gene-RM588_RS02860;Dbxref=GenBank:WP_037573409.1;Name=WP_037573409.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614045.1;locus_tag=RM588_RS02860;product=ArsR/SmtB family transcription factor;protein_id=WP_037573409.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	560088	560306	.	+	.	ID=gene-RM588_RS02865;Name=RM588_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02865;old_locus_tag=RM588_02865
NZ_JAVRJR010000001.1	Protein Homology	CDS	560088	560306	.	+	0	ID=cds-WP_037573959.1;Parent=gene-RM588_RS02865;Dbxref=GenBank:WP_037573959.1;Name=WP_037573959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483434.1;locus_tag=RM588_RS02865;product=hypothetical protein;protein_id=WP_037573959.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	560378	561937	.	-	.	ID=gene-RM588_RS02870;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=RM588_RS02870;old_locus_tag=RM588_02870
NZ_JAVRJR010000001.1	Protein Homology	CDS	560378	561937	.	-	0	ID=cds-WP_037573407.1;Parent=gene-RM588_RS02870;Dbxref=GenBank:WP_037573407.1;Name=WP_037573407.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=RM588_RS02870;product=ribonuclease Y;protein_id=WP_037573407.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	562480	563523	.	-	.	ID=gene-RM588_RS02875;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=RM588_RS02875;old_locus_tag=RM588_02875
NZ_JAVRJR010000001.1	Protein Homology	CDS	562480	563523	.	-	0	ID=cds-WP_037573405.1;Parent=gene-RM588_RS02875;Dbxref=GenBank:WP_037573405.1;Name=WP_037573405.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=RM588_RS02875;product=recombinase RecA;protein_id=WP_037573405.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	563685	564836	.	-	.	ID=gene-RM588_RS02880;Name=RM588_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02880;old_locus_tag=RM588_02880
NZ_JAVRJR010000001.1	Protein Homology	CDS	563685	564836	.	-	0	ID=cds-WP_037573400.1;Parent=gene-RM588_RS02880;Dbxref=GenBank:WP_037573400.1;Name=WP_037573400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465812.1;locus_tag=RM588_RS02880;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_037573400.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	564943	565527	.	-	.	ID=gene-RM588_RS02885;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=RM588_RS02885;old_locus_tag=RM588_02885
NZ_JAVRJR010000001.1	Protein Homology	CDS	564943	565527	.	-	0	ID=cds-WP_037573398.1;Parent=gene-RM588_RS02885;Dbxref=GenBank:WP_037573398.1;Name=WP_037573398.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165448.1;locus_tag=RM588_RS02885;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_037573398.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	565568	565963	.	-	.	ID=gene-RM588_RS02890;Name=RM588_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02890;old_locus_tag=RM588_02890
NZ_JAVRJR010000001.1	Protein Homology	CDS	565568	565963	.	-	0	ID=cds-WP_037573396.1;Parent=gene-RM588_RS02890;Dbxref=GenBank:WP_037573396.1;Name=WP_037573396.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024805.7;locus_tag=RM588_RS02890;product=helix-turn-helix domain-containing protein;protein_id=WP_037573396.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	565976	566845	.	-	.	ID=gene-RM588_RS02895;Name=RM588_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02895;old_locus_tag=RM588_02895
NZ_JAVRJR010000001.1	Protein Homology	CDS	565976	566845	.	-	0	ID=cds-WP_037573391.1;Parent=gene-RM588_RS02895;Dbxref=GenBank:WP_037573391.1;Name=WP_037573391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381771.1;locus_tag=RM588_RS02895;product=DUF3388 domain-containing protein;protein_id=WP_037573391.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	566897	567601	.	-	.	ID=gene-RM588_RS02900;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=RM588_RS02900;old_locus_tag=RM588_02900
NZ_JAVRJR010000001.1	Protein Homology	CDS	566897	567601	.	-	0	ID=cds-WP_037573389.1;Parent=gene-RM588_RS02900;Dbxref=GenBank:WP_037573389.1;Name=WP_037573389.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662935.1;locus_tag=RM588_RS02900;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_037573389.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	567601	568887	.	-	.	ID=gene-RM588_RS02905;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=RM588_RS02905;old_locus_tag=RM588_02905
NZ_JAVRJR010000001.1	Protein Homology	CDS	567601	568887	.	-	0	ID=cds-WP_037573387.1;Parent=gene-RM588_RS02905;Dbxref=GenBank:WP_037573387.1;Name=WP_037573387.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638356.1;locus_tag=RM588_RS02905;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_037573387.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	568880	570154	.	-	.	ID=gene-RM588_RS02910;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=RM588_RS02910;old_locus_tag=RM588_02910
NZ_JAVRJR010000001.1	Protein Homology	CDS	568880	570154	.	-	0	ID=cds-WP_259336484.1;Parent=gene-RM588_RS02910;Dbxref=GenBank:WP_259336484.1;Name=WP_259336484.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165453.1;locus_tag=RM588_RS02910;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_259336484.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	570185	570901	.	-	.	ID=gene-RM588_RS02915;Name=RM588_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02915;old_locus_tag=RM588_02915
NZ_JAVRJR010000001.1	Protein Homology	CDS	570185	570901	.	-	0	ID=cds-WP_037573385.1;Parent=gene-RM588_RS02915;Dbxref=GenBank:WP_037573385.1;Name=WP_037573385.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614057.1;locus_tag=RM588_RS02915;product=GntR family transcriptional regulator;protein_id=WP_037573385.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	570904	573255	.	-	.	ID=gene-RM588_RS02920;Name=RM588_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02920;old_locus_tag=RM588_02920
NZ_JAVRJR010000001.1	Protein Homology	CDS	570904	573255	.	-	0	ID=cds-WP_103158689.1;Parent=gene-RM588_RS02920;Dbxref=GenBank:WP_103158689.1;Name=WP_103158689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165454.1;locus_tag=RM588_RS02920;product=DNA translocase FtsK;protein_id=WP_103158689.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	573488	575161	.	-	.	ID=gene-RM588_RS02925;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=RM588_RS02925;old_locus_tag=RM588_02925
NZ_JAVRJR010000001.1	Protein Homology	CDS	573488	575161	.	-	0	ID=cds-WP_037573383.1;Parent=gene-RM588_RS02925;Dbxref=GenBank:WP_037573383.1;Name=WP_037573383.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=RM588_RS02925;product=ribonuclease J2;protein_id=WP_037573383.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	575469	576785	.	-	.	ID=gene-RM588_RS02930;Name=RM588_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02930;old_locus_tag=RM588_02930
NZ_JAVRJR010000001.1	Protein Homology	CDS	575469	576785	.	-	0	ID=cds-WP_311548070.1;Parent=gene-RM588_RS02930;Dbxref=GenBank:WP_311548070.1;Name=WP_311548070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039646018.1;locus_tag=RM588_RS02930;product=M30 family zinc metallopeptidase;protein_id=WP_311548070.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	577063	579168	.	-	.	ID=gene-RM588_RS02935;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=RM588_RS02935;old_locus_tag=RM588_02935
NZ_JAVRJR010000001.1	Protein Homology	CDS	577063	579168	.	-	0	ID=cds-WP_107370275.1;Parent=gene-RM588_RS02935;Dbxref=GenBank:WP_107370275.1;Name=WP_107370275.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900164.1;locus_tag=RM588_RS02935;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_107370275.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	579332	579601	.	-	.	ID=gene-RM588_RS02940;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=RM588_RS02940;old_locus_tag=RM588_02940
NZ_JAVRJR010000001.1	Protein Homology	CDS	579332	579601	.	-	0	ID=cds-WP_037573379.1;Parent=gene-RM588_RS02940;Dbxref=GenBank:WP_037573379.1;Name=WP_037573379.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=RM588_RS02940;product=30S ribosomal protein S15;protein_id=WP_037573379.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	579705	580676	.	-	.	ID=gene-RM588_RS02945;Name=RM588_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02945;old_locus_tag=RM588_02945
NZ_JAVRJR010000001.1	Protein Homology	CDS	579705	580676	.	-	0	ID=cds-WP_105996629.1;Parent=gene-RM588_RS02945;Dbxref=GenBank:WP_105996629.1;Name=WP_105996629.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009558826.1;locus_tag=RM588_RS02945;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_105996629.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	580691	581608	.	-	.	ID=gene-RM588_RS02950;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=RM588_RS02950;old_locus_tag=RM588_02950
NZ_JAVRJR010000001.1	Protein Homology	CDS	580691	581608	.	-	0	ID=cds-WP_037573374.1;Parent=gene-RM588_RS02950;Dbxref=GenBank:WP_037573374.1;Name=WP_037573374.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=RM588_RS02950;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_037573374.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	581680	582024	.	-	.	ID=gene-RM588_RS02955;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=RM588_RS02955;old_locus_tag=RM588_02955
NZ_JAVRJR010000001.1	Protein Homology	CDS	581680	582024	.	-	0	ID=cds-WP_037573372.1;Parent=gene-RM588_RS02955;Dbxref=GenBank:WP_037573372.1;Name=WP_037573372.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=RM588_RS02955;product=30S ribosome-binding factor RbfA;protein_id=WP_037573372.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	582123	582506	.	-	.	ID=gene-RM588_RS02960;Name=RM588_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02960;old_locus_tag=RM588_02960
NZ_JAVRJR010000001.1	Protein Homology	CDS	582123	582506	.	-	0	ID=cds-WP_037573370.1;Parent=gene-RM588_RS02960;Dbxref=GenBank:WP_037573370.1;Name=WP_037573370.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480708.1;locus_tag=RM588_RS02960;product=VOC family protein;protein_id=WP_037573370.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	582703	584850	.	-	.	ID=gene-RM588_RS02965;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=RM588_RS02965;old_locus_tag=RM588_02965
NZ_JAVRJR010000001.1	Protein Homology	CDS	582703	584850	.	-	0	ID=cds-WP_037573368.1;Parent=gene-RM588_RS02965;Dbxref=GenBank:WP_037573368.1;Name=WP_037573368.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898111.1;locus_tag=RM588_RS02965;product=translation initiation factor IF-2;protein_id=WP_037573368.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	584867	585172	.	-	.	ID=gene-RM588_RS02970;Name=RM588_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02970;old_locus_tag=RM588_02970
NZ_JAVRJR010000001.1	Protein Homology	CDS	584867	585172	.	-	0	ID=cds-WP_037573366.1;Parent=gene-RM588_RS02970;Dbxref=GenBank:WP_037573366.1;Name=WP_037573366.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169516.1;locus_tag=RM588_RS02970;product=YlxQ family RNA-binding protein;protein_id=WP_037573366.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	585169	585456	.	-	.	ID=gene-RM588_RS02975;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=RM588_RS02975;old_locus_tag=RM588_02975
NZ_JAVRJR010000001.1	Protein Homology	CDS	585169	585456	.	-	0	ID=cds-WP_037573364.1;Parent=gene-RM588_RS02975;Dbxref=GenBank:WP_037573364.1;Name=WP_037573364.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169517.1;locus_tag=RM588_RS02975;product=RNase P modulator RnpM;protein_id=WP_037573364.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	pseudogene	585612	586644	.	-	.	ID=gene-RM588_RS02980;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=RM588_RS02980;old_locus_tag=RM588_02980;partial=true;pseudo=true;start_range=.,585612
NZ_JAVRJR010000001.1	Protein Homology	CDS	585612	586644	.	-	0	ID=cds-RM588_RS02980;Parent=gene-RM588_RS02980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499776.1;locus_tag=RM588_RS02980;partial=true;product=transcription termination factor NusA;pseudo=true;start_range=.,585612;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	586664	587131	.	-	.	ID=gene-RM588_RS02985;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=RM588_RS02985;old_locus_tag=RM588_02985
NZ_JAVRJR010000001.1	Protein Homology	CDS	586664	587131	.	-	0	ID=cds-WP_037573359.1;Parent=gene-RM588_RS02985;Dbxref=GenBank:WP_037573359.1;Name=WP_037573359.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363146.1;locus_tag=RM588_RS02985;product=ribosome maturation factor RimP;protein_id=WP_037573359.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	587258	591568	.	-	.	ID=gene-RM588_RS02990;Name=RM588_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02990;old_locus_tag=RM588_02990
NZ_JAVRJR010000001.1	Protein Homology	CDS	587258	591568	.	-	0	ID=cds-WP_037573358.1;Parent=gene-RM588_RS02990;Dbxref=GenBank:WP_037573358.1;Name=WP_037573358.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303258.1;locus_tag=RM588_RS02990;product=PolC-type DNA polymerase III;protein_id=WP_037573358.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	591766	593472	.	-	.	ID=gene-RM588_RS02995;Name=RM588_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS02995;old_locus_tag=RM588_02995
NZ_JAVRJR010000001.1	Protein Homology	CDS	591766	593472	.	-	0	ID=cds-WP_037573356.1;Parent=gene-RM588_RS02995;Dbxref=GenBank:WP_037573356.1;Name=WP_037573356.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453094.1;locus_tag=RM588_RS02995;product=proline--tRNA ligase;protein_id=WP_037573356.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	593500	594780	.	-	.	ID=gene-RM588_RS03000;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=RM588_RS03000;old_locus_tag=RM588_03000
NZ_JAVRJR010000001.1	Protein Homology	CDS	593500	594780	.	-	0	ID=cds-WP_037573354.1;Parent=gene-RM588_RS03000;Dbxref=GenBank:WP_037573354.1;Name=WP_037573354.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614075.1;locus_tag=RM588_RS03000;product=RIP metalloprotease RseP;protein_id=WP_037573354.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	594787	595917	.	-	.	ID=gene-RM588_RS03005;Name=RM588_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03005;old_locus_tag=RM588_03005
NZ_JAVRJR010000001.1	Protein Homology	CDS	594787	595917	.	-	0	ID=cds-WP_037573956.1;Parent=gene-RM588_RS03005;Dbxref=GenBank:WP_037573956.1;Name=WP_037573956.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381738.1;locus_tag=RM588_RS03005;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_037573956.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	595933	596712	.	-	.	ID=gene-RM588_RS03010;Name=RM588_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03010;old_locus_tag=RM588_03010
NZ_JAVRJR010000001.1	Protein Homology	CDS	595933	596712	.	-	0	ID=cds-WP_037573352.1;Parent=gene-RM588_RS03010;Dbxref=GenBank:WP_037573352.1;Name=WP_037573352.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=RM588_RS03010;product=phosphatidate cytidylyltransferase;protein_id=WP_037573352.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	596726	597487	.	-	.	ID=gene-RM588_RS03015;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=ispU;locus_tag=RM588_RS03015;old_locus_tag=RM588_03015
NZ_JAVRJR010000001.1	Protein Homology	CDS	596726	597487	.	-	0	ID=cds-WP_037573351.1;Parent=gene-RM588_RS03015;Dbxref=GenBank:WP_037573351.1;Name=WP_037573351.1;Ontology_term=GO:0008834;gbkey=CDS;gene=uppS;go_function=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167859.1;locus_tag=RM588_RS03015;product=undecaprenyl pyrophosphate synthase;protein_id=WP_037573351.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	597637	598191	.	-	.	ID=gene-RM588_RS03020;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=RM588_RS03020;old_locus_tag=RM588_03020
NZ_JAVRJR010000001.1	Protein Homology	CDS	597637	598191	.	-	0	ID=cds-WP_037573344.1;Parent=gene-RM588_RS03020;Dbxref=GenBank:WP_037573344.1;Name=WP_037573344.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=RM588_RS03020;product=ribosome recycling factor;protein_id=WP_037573344.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	598211	598933	.	-	.	ID=gene-RM588_RS03025;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=RM588_RS03025;old_locus_tag=RM588_03025
NZ_JAVRJR010000001.1	Protein Homology	CDS	598211	598933	.	-	0	ID=cds-WP_037573342.1;Parent=gene-RM588_RS03025;Dbxref=GenBank:WP_037573342.1;Name=WP_037573342.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499768.1;locus_tag=RM588_RS03025;product=UMP kinase;protein_id=WP_037573342.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	599087	599968	.	-	.	ID=gene-RM588_RS03030;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=RM588_RS03030;old_locus_tag=RM588_03030
NZ_JAVRJR010000001.1	Protein Homology	CDS	599087	599968	.	-	0	ID=cds-WP_182465435.1;Parent=gene-RM588_RS03030;Dbxref=GenBank:WP_182465435.1;Name=WP_182465435.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499767.1;locus_tag=RM588_RS03030;product=translation elongation factor Ts;protein_id=WP_182465435.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	600183	600971	.	-	.	ID=gene-RM588_RS03035;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=RM588_RS03035;old_locus_tag=RM588_03035
NZ_JAVRJR010000001.1	Protein Homology	CDS	600183	600971	.	-	0	ID=cds-WP_037573336.1;Parent=gene-RM588_RS03035;Dbxref=GenBank:WP_037573336.1;Name=WP_037573336.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=RM588_RS03035;product=30S ribosomal protein S2;protein_id=WP_037573336.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	601133	601906	.	-	.	ID=gene-RM588_RS03040;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=RM588_RS03040;old_locus_tag=RM588_03040
NZ_JAVRJR010000001.1	Protein Homology	CDS	601133	601906	.	-	0	ID=cds-WP_037573333.1;Parent=gene-RM588_RS03040;Dbxref=GenBank:WP_037573333.1;Name=WP_037573333.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=RM588_RS03040;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_037573333.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	601921	603330	.	-	.	ID=gene-RM588_RS03045;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=RM588_RS03045;old_locus_tag=RM588_03045
NZ_JAVRJR010000001.1	Protein Homology	CDS	601921	603330	.	-	0	ID=cds-WP_037573330.1;Parent=gene-RM588_RS03045;Dbxref=GenBank:WP_037573330.1;Name=WP_037573330.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=RM588_RS03045;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_037573330.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	603347	603889	.	-	.	ID=gene-RM588_RS03050;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=RM588_RS03050;old_locus_tag=RM588_03050
NZ_JAVRJR010000001.1	Protein Homology	CDS	603347	603889	.	-	0	ID=cds-WP_037573327.1;Parent=gene-RM588_RS03050;Dbxref=GenBank:WP_037573327.1;Name=WP_037573327.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=RM588_RS03050;product=ATP-dependent protease subunit HslV;protein_id=WP_037573327.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	603895	604785	.	-	.	ID=gene-RM588_RS03055;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=RM588_RS03055;old_locus_tag=RM588_03055
NZ_JAVRJR010000001.1	Protein Homology	CDS	603895	604785	.	-	0	ID=cds-WP_037573324.1;Parent=gene-RM588_RS03055;Dbxref=GenBank:WP_037573324.1;Name=WP_037573324.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453085.1;locus_tag=RM588_RS03055;product=tyrosine recombinase XerC;protein_id=WP_037573324.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	604907	606211	.	-	.	ID=gene-RM588_RS03060;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=RM588_RS03060;old_locus_tag=RM588_03060
NZ_JAVRJR010000001.1	Protein Homology	CDS	604907	606211	.	-	0	ID=cds-WP_037573322.1;Parent=gene-RM588_RS03060;Dbxref=GenBank:WP_037573322.1;Name=WP_037573322.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167867.1;locus_tag=RM588_RS03060;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_037573322.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	606224	608293	.	-	.	ID=gene-RM588_RS03065;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=RM588_RS03065;old_locus_tag=RM588_03065
NZ_JAVRJR010000001.1	Protein Homology	CDS	606224	608293	.	-	0	ID=cds-WP_037573320.1;Parent=gene-RM588_RS03065;Dbxref=GenBank:WP_037573320.1;Name=WP_037573320.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=RM588_RS03065;product=type I DNA topoisomerase;protein_id=WP_037573320.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	608389	609249	.	-	.	ID=gene-RM588_RS03070;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=RM588_RS03070;old_locus_tag=RM588_03070
NZ_JAVRJR010000001.1	Protein Homology	CDS	608389	609249	.	-	0	ID=cds-WP_037573317.1;Parent=gene-RM588_RS03070;Dbxref=GenBank:WP_037573317.1;Name=WP_037573317.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167869.1;locus_tag=RM588_RS03070;product=DNA-processing protein DprA;protein_id=WP_037573317.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	609554	610462	.	-	.	ID=gene-RM588_RS03075;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=RM588_RS03075;old_locus_tag=RM588_03075
NZ_JAVRJR010000001.1	Protein Homology	CDS	609554	610462	.	-	0	ID=cds-WP_311548071.1;Parent=gene-RM588_RS03075;Dbxref=GenBank:WP_311548071.1;Name=WP_311548071.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499754.1;locus_tag=RM588_RS03075;product=succinate--CoA ligase subunit alpha;protein_id=WP_311548071.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	610483	611649	.	-	.	ID=gene-RM588_RS03080;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=RM588_RS03080;old_locus_tag=RM588_03080
NZ_JAVRJR010000001.1	Protein Homology	CDS	610483	611649	.	-	0	ID=cds-WP_103159284.1;Parent=gene-RM588_RS03080;Dbxref=GenBank:WP_103159284.1;Name=WP_103159284.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=RM588_RS03080;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_103159284.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	611874	612143	.	-	.	ID=gene-RM588_RS03085;Name=RM588_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03085;old_locus_tag=RM588_03085
NZ_JAVRJR010000001.1	Protein Homology	CDS	611874	612143	.	-	0	ID=cds-WP_037573311.1;Parent=gene-RM588_RS03085;Dbxref=GenBank:WP_037573311.1;Name=WP_037573311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424899.1;locus_tag=RM588_RS03085;product=hypothetical protein;protein_id=WP_037573311.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	612222	613001	.	-	.	ID=gene-RM588_RS03090;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=RM588_RS03090;old_locus_tag=RM588_03090
NZ_JAVRJR010000001.1	Protein Homology	CDS	612222	613001	.	-	0	ID=cds-WP_037573308.1;Parent=gene-RM588_RS03090;Dbxref=GenBank:WP_037573308.1;Name=WP_037573308.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614093.1;locus_tag=RM588_RS03090;product=ribonuclease HII;protein_id=WP_037573308.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	612982	613872	.	-	.	ID=gene-RM588_RS03095;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=RM588_RS03095;old_locus_tag=RM588_03095
NZ_JAVRJR010000001.1	Protein Homology	CDS	612982	613872	.	-	0	ID=cds-WP_037573306.1;Parent=gene-RM588_RS03095;Dbxref=GenBank:WP_037573306.1;Name=WP_037573306.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448797.1;locus_tag=RM588_RS03095;product=ribosome biogenesis GTPase YlqF;protein_id=WP_037573306.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	614104	614466	.	+	.	ID=gene-RM588_RS03100;Name=RM588_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03100;old_locus_tag=RM588_03100
NZ_JAVRJR010000001.1	Protein Homology	CDS	614104	614466	.	+	0	ID=cds-WP_037573953.1;Parent=gene-RM588_RS03100;Dbxref=GenBank:WP_037573953.1;Name=WP_037573953.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729036.1;locus_tag=RM588_RS03100;product=GtrA family protein;protein_id=WP_037573953.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	614485	617091	.	+	.	ID=gene-RM588_RS03105;Name=RM588_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03105;old_locus_tag=RM588_03105
NZ_JAVRJR010000001.1	Protein Homology	CDS	614485	617091	.	+	0	ID=cds-WP_311548072.1;Parent=gene-RM588_RS03105;Dbxref=GenBank:WP_311548072.1;Name=WP_311548072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614096.1;locus_tag=RM588_RS03105;product=YfhO family protein;protein_id=WP_311548072.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	617088	619673	.	+	.	ID=gene-RM588_RS03110;Name=RM588_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03110;old_locus_tag=RM588_03110
NZ_JAVRJR010000001.1	Protein Homology	CDS	617088	619673	.	+	0	ID=cds-WP_311548073.1;Parent=gene-RM588_RS03110;Dbxref=GenBank:WP_311548073.1;Name=WP_311548073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510970.1;locus_tag=RM588_RS03110;product=YfhO family protein;protein_id=WP_311548073.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	619728	620279	.	-	.	ID=gene-RM588_RS03115;Name=RM588_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03115;old_locus_tag=RM588_03115
NZ_JAVRJR010000001.1	Protein Homology	CDS	619728	620279	.	-	0	ID=cds-WP_157946133.1;Parent=gene-RM588_RS03115;Dbxref=GenBank:WP_157946133.1;Name=WP_157946133.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: protein motif:HMM:NF013718.7;locus_tag=RM588_RS03115;product=phosphatase PAP2 family protein;protein_id=WP_157946133.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	620677	621027	.	-	.	ID=gene-RM588_RS03120;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=RM588_RS03120;old_locus_tag=RM588_03120
NZ_JAVRJR010000001.1	Protein Homology	CDS	620677	621027	.	-	0	ID=cds-WP_037573298.1;Parent=gene-RM588_RS03120;Dbxref=GenBank:WP_037573298.1;Name=WP_037573298.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=RM588_RS03120;product=50S ribosomal protein L19;protein_id=WP_037573298.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	621129	621866	.	-	.	ID=gene-RM588_RS03125;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=RM588_RS03125;old_locus_tag=RM588_03125
NZ_JAVRJR010000001.1	Protein Homology	CDS	621129	621866	.	-	0	ID=cds-WP_103159281.1;Parent=gene-RM588_RS03125;Dbxref=GenBank:WP_103159281.1;Name=WP_103159281.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=RM588_RS03125;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_103159281.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	621863	622366	.	-	.	ID=gene-RM588_RS03130;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=RM588_RS03130;old_locus_tag=RM588_03130
NZ_JAVRJR010000001.1	Protein Homology	CDS	621863	622366	.	-	0	ID=cds-WP_311548074.1;Parent=gene-RM588_RS03130;Dbxref=GenBank:WP_311548074.1;Name=WP_311548074.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167882.1;locus_tag=RM588_RS03130;product=ribosome maturation factor RimM;protein_id=WP_311548074.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	622470	622745	.	-	.	ID=gene-RM588_RS03135;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=RM588_RS03135;old_locus_tag=RM588_03135
NZ_JAVRJR010000001.1	Protein Homology	CDS	622470	622745	.	-	0	ID=cds-WP_037573289.1;Parent=gene-RM588_RS03135;Dbxref=GenBank:WP_037573289.1;Name=WP_037573289.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=RM588_RS03135;product=30S ribosomal protein S16;protein_id=WP_037573289.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	622990	624357	.	-	.	ID=gene-RM588_RS03140;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=RM588_RS03140;old_locus_tag=RM588_03140
NZ_JAVRJR010000001.1	Protein Homology	CDS	622990	624357	.	-	0	ID=cds-WP_105962770.1;Parent=gene-RM588_RS03140;Dbxref=GenBank:WP_105962770.1;Name=WP_105962770.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=RM588_RS03140;product=signal recognition particle protein;protein_id=WP_105962770.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	624371	624703	.	-	.	ID=gene-RM588_RS03145;Name=RM588_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03145;old_locus_tag=RM588_03145
NZ_JAVRJR010000001.1	Protein Homology	CDS	624371	624703	.	-	0	ID=cds-WP_037573283.1;Parent=gene-RM588_RS03145;Dbxref=GenBank:WP_037573283.1;Name=WP_037573283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473260.1;locus_tag=RM588_RS03145;product=putative DNA-binding protein;protein_id=WP_037573283.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	624690	626045	.	-	.	ID=gene-RM588_RS03150;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=RM588_RS03150;old_locus_tag=RM588_03150
NZ_JAVRJR010000001.1	Protein Homology	CDS	624690	626045	.	-	0	ID=cds-WP_037573280.1;Parent=gene-RM588_RS03150;Dbxref=GenBank:WP_037573280.1;Name=WP_037573280.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365083.1;locus_tag=RM588_RS03150;product=signal recognition particle-docking protein FtsY;protein_id=WP_037573280.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	626046	629612	.	-	.	ID=gene-RM588_RS03155;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=RM588_RS03155;old_locus_tag=RM588_03155
NZ_JAVRJR010000001.1	Protein Homology	CDS	626046	629612	.	-	0	ID=cds-WP_311548075.1;Parent=gene-RM588_RS03155;Dbxref=GenBank:WP_311548075.1;Name=WP_311548075.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729018.1;locus_tag=RM588_RS03155;product=chromosome segregation protein SMC;protein_id=WP_311548075.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	629616	630287	.	-	.	ID=gene-RM588_RS03160;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=RM588_RS03160;old_locus_tag=RM588_03160
NZ_JAVRJR010000001.1	Protein Homology	CDS	629616	630287	.	-	0	ID=cds-WP_371874978.1;Parent=gene-RM588_RS03160;Dbxref=GenBank:WP_371874978.1;Name=WP_371874978.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480668.1;locus_tag=RM588_RS03160;product=ribonuclease III;protein_id=WP_371874978.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	630456	630689	.	-	.	ID=gene-RM588_RS03165;Name=RM588_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03165;old_locus_tag=RM588_03165
NZ_JAVRJR010000001.1	Protein Homology	CDS	630456	630689	.	-	0	ID=cds-WP_019165520.1;Parent=gene-RM588_RS03165;Dbxref=GenBank:WP_019165520.1;Name=WP_019165520.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=RM588_RS03165;product=acyl carrier protein;protein_id=WP_019165520.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	630865	631602	.	-	.	ID=gene-RM588_RS03170;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=RM588_RS03170;old_locus_tag=RM588_03170
NZ_JAVRJR010000001.1	Protein Homology	CDS	630865	631602	.	-	0	ID=cds-WP_105965242.1;Parent=gene-RM588_RS03170;Dbxref=GenBank:WP_105965242.1;Name=WP_105965242.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614124.1;locus_tag=RM588_RS03170;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_105965242.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	631595	632521	.	-	.	ID=gene-RM588_RS03175;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=RM588_RS03175;old_locus_tag=RM588_03175
NZ_JAVRJR010000001.1	Protein Homology	CDS	631595	632521	.	-	0	ID=cds-WP_037573267.1;Parent=gene-RM588_RS03175;Dbxref=GenBank:WP_037573267.1;Name=WP_037573267.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489765.1;locus_tag=RM588_RS03175;product=ACP S-malonyltransferase;protein_id=WP_037573267.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	632514	633500	.	-	.	ID=gene-RM588_RS03180;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=RM588_RS03180;old_locus_tag=RM588_03180
NZ_JAVRJR010000001.1	Protein Homology	CDS	632514	633500	.	-	0	ID=cds-WP_037573261.1;Parent=gene-RM588_RS03180;Dbxref=GenBank:WP_037573261.1;Name=WP_037573261.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450581.1;locus_tag=RM588_RS03180;product=phosphate acyltransferase PlsX;protein_id=WP_037573261.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	633493	634062	.	-	.	ID=gene-RM588_RS03185;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=RM588_RS03185;old_locus_tag=RM588_03185
NZ_JAVRJR010000001.1	Protein Homology	CDS	633493	634062	.	-	0	ID=cds-WP_037573258.1;Parent=gene-RM588_RS03185;Dbxref=GenBank:WP_037573258.1;Name=WP_037573258.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174579.1;locus_tag=RM588_RS03185;product=transcription factor FapR;protein_id=WP_037573258.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	634150	634599	.	-	.	ID=gene-RM588_RS03190;Name=RM588_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03190;old_locus_tag=RM588_03190
NZ_JAVRJR010000001.1	Protein Homology	CDS	634150	634599	.	-	0	ID=cds-WP_037573255.1;Parent=gene-RM588_RS03190;Dbxref=GenBank:WP_037573255.1;Name=WP_037573255.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF057839.1;locus_tag=RM588_RS03190;product=ASCH domain-containing protein;protein_id=WP_037573255.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	634750	636795	.	-	.	ID=gene-RM588_RS03195;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=RM588_RS03195;old_locus_tag=RM588_03195
NZ_JAVRJR010000001.1	Protein Homology	CDS	634750	636795	.	-	0	ID=cds-WP_037573252.1;Parent=gene-RM588_RS03195;Dbxref=GenBank:WP_037573252.1;Name=WP_037573252.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=RM588_RS03195;product=ATP-dependent DNA helicase RecG;protein_id=WP_037573252.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	636797	637666	.	-	.	ID=gene-RM588_RS03200;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM588_RS03200;old_locus_tag=RM588_03200
NZ_JAVRJR010000001.1	Protein Homology	CDS	636797	637666	.	-	0	ID=cds-WP_037573250.1;Parent=gene-RM588_RS03200;Dbxref=GenBank:WP_037573250.1;Name=WP_037573250.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=RM588_RS03200;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_037573250.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	637685	638350	.	-	.	ID=gene-RM588_RS03205;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM588_RS03205;old_locus_tag=RM588_03205
NZ_JAVRJR010000001.1	Protein Homology	CDS	637685	638350	.	-	0	ID=cds-WP_037573246.1;Parent=gene-RM588_RS03205;Dbxref=GenBank:WP_037573246.1;Name=WP_037573246.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303291.1;locus_tag=RM588_RS03205;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_037573246.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	638508	640166	.	-	.	ID=gene-RM588_RS03210;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=RM588_RS03210;old_locus_tag=RM588_03210
NZ_JAVRJR010000001.1	Protein Homology	CDS	638508	640166	.	-	0	ID=cds-WP_105962764.1;Parent=gene-RM588_RS03210;Dbxref=GenBank:WP_105962764.1;Name=WP_105962764.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446265.1;locus_tag=RM588_RS03210;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_105962764.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	640179	640553	.	-	.	ID=gene-RM588_RS03215;Name=RM588_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03215;old_locus_tag=RM588_03215
NZ_JAVRJR010000001.1	Protein Homology	CDS	640179	640553	.	-	0	ID=cds-WP_037573243.1;Parent=gene-RM588_RS03215;Dbxref=GenBank:WP_037573243.1;Name=WP_037573243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167372.1;locus_tag=RM588_RS03215;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_037573243.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	640960	641148	.	+	.	ID=gene-RM588_RS03220;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=RM588_RS03220;old_locus_tag=RM588_03220
NZ_JAVRJR010000001.1	Protein Homology	CDS	640960	641148	.	+	0	ID=cds-WP_037564748.1;Parent=gene-RM588_RS03220;Dbxref=GenBank:WP_037564748.1;Name=WP_037564748.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=RM588_RS03220;product=50S ribosomal protein L28;protein_id=WP_037564748.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	641297	641932	.	-	.	ID=gene-RM588_RS03225;Name=RM588_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03225;old_locus_tag=RM588_03225
NZ_JAVRJR010000001.1	Protein Homology	CDS	641297	641932	.	-	0	ID=cds-WP_103159274.1;Parent=gene-RM588_RS03225;Dbxref=GenBank:WP_103159274.1;Name=WP_103159274.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424872.1;locus_tag=RM588_RS03225;product=thiamine diphosphokinase;protein_id=WP_103159274.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	641936	642586	.	-	.	ID=gene-RM588_RS03230;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=RM588_RS03230;old_locus_tag=RM588_03230
NZ_JAVRJR010000001.1	Protein Homology	CDS	641936	642586	.	-	0	ID=cds-WP_037573241.1;Parent=gene-RM588_RS03230;Dbxref=GenBank:WP_037573241.1;Name=WP_037573241.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614135.1;locus_tag=RM588_RS03230;product=ribulose-phosphate 3-epimerase;protein_id=WP_037573241.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	642586	643461	.	-	.	ID=gene-RM588_RS03235;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=RM588_RS03235;old_locus_tag=RM588_03235
NZ_JAVRJR010000001.1	Protein Homology	CDS	642586	643461	.	-	0	ID=cds-WP_037573240.1;Parent=gene-RM588_RS03235;Dbxref=GenBank:WP_037573240.1;Name=WP_037573240.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=RM588_RS03235;product=ribosome small subunit-dependent GTPase A;protein_id=WP_037573240.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	643723	645000	.	-	.	ID=gene-RM588_RS03240;Name=RM588_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03240;old_locus_tag=RM588_03240
NZ_JAVRJR010000001.1	Protein Homology	CDS	643723	645000	.	-	0	ID=cds-WP_037573237.1;Parent=gene-RM588_RS03240;Dbxref=GenBank:WP_037573237.1;Name=WP_037573237.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911561.1;locus_tag=RM588_RS03240;product=cytochrome P450;protein_id=WP_037573237.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	645180	647183	.	-	.	ID=gene-RM588_RS03245;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=RM588_RS03245;old_locus_tag=RM588_03245
NZ_JAVRJR010000001.1	Protein Homology	CDS	645180	647183	.	-	0	ID=cds-WP_103159273.1;Parent=gene-RM588_RS03245;Dbxref=GenBank:WP_103159273.1;Name=WP_103159273.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165532.1;locus_tag=RM588_RS03245;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_103159273.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	647180	647923	.	-	.	ID=gene-RM588_RS03250;Name=RM588_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03250;old_locus_tag=RM588_03250
NZ_JAVRJR010000001.1	Protein Homology	CDS	647180	647923	.	-	0	ID=cds-WP_037573232.1;Parent=gene-RM588_RS03250;Dbxref=GenBank:WP_037573232.1;Name=WP_037573232.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830090.1;locus_tag=RM588_RS03250;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_037573232.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	647929	649023	.	-	.	ID=gene-RM588_RS03255;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=RM588_RS03255;old_locus_tag=RM588_03255
NZ_JAVRJR010000001.1	Protein Homology	CDS	647929	649023	.	-	0	ID=cds-WP_037573228.1;Parent=gene-RM588_RS03255;Dbxref=GenBank:WP_037573228.1;Name=WP_037573228.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=RM588_RS03255;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_037573228.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	649020	650330	.	-	.	ID=gene-RM588_RS03260;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=RM588_RS03260;old_locus_tag=RM588_03260
NZ_JAVRJR010000001.1	Protein Homology	CDS	649020	650330	.	-	0	ID=cds-WP_105962760.1;Parent=gene-RM588_RS03260;Dbxref=GenBank:WP_105962760.1;Name=WP_105962760.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478311.1;locus_tag=RM588_RS03260;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_105962760.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	650331	651269	.	-	.	ID=gene-RM588_RS03265;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=RM588_RS03265;old_locus_tag=RM588_03265
NZ_JAVRJR010000001.1	Protein Homology	CDS	650331	651269	.	-	0	ID=cds-WP_037573223.1;Parent=gene-RM588_RS03265;Dbxref=GenBank:WP_037573223.1;Name=WP_037573223.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507902.1;locus_tag=RM588_RS03265;product=methionyl-tRNA formyltransferase;protein_id=WP_037573223.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	651256	651744	.	-	.	ID=gene-RM588_RS03270;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM588_RS03270;old_locus_tag=RM588_03270
NZ_JAVRJR010000001.1	Protein Homology	CDS	651256	651744	.	-	0	ID=cds-WP_105962759.1;Parent=gene-RM588_RS03270;Dbxref=GenBank:WP_105962759.1;Name=WP_105962759.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493109.1;locus_tag=RM588_RS03270;product=peptide deformylase;protein_id=WP_105962759.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	652113	654530	.	-	.	ID=gene-RM588_RS03275;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=RM588_RS03275;old_locus_tag=RM588_03275
NZ_JAVRJR010000001.1	Protein Homology	CDS	652113	654530	.	-	0	ID=cds-WP_233654913.1;Parent=gene-RM588_RS03275;Dbxref=GenBank:WP_233654913.1;Name=WP_233654913.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813047.1;locus_tag=RM588_RS03275;product=primosomal protein N';protein_id=WP_233654913.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	654521	655741	.	-	.	ID=gene-RM588_RS03280;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=RM588_RS03280;old_locus_tag=RM588_03280
NZ_JAVRJR010000001.1	Protein Homology	CDS	654521	655741	.	-	0	ID=cds-WP_107363453.1;Parent=gene-RM588_RS03280;Dbxref=GenBank:WP_107363453.1;Name=WP_107363453.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483516.1;locus_tag=RM588_RS03280;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_107363453.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	655920	656129	.	-	.	ID=gene-RM588_RS03285;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=RM588_RS03285;old_locus_tag=RM588_03285
NZ_JAVRJR010000001.1	Protein Homology	CDS	655920	656129	.	-	0	ID=cds-WP_037573213.1;Parent=gene-RM588_RS03285;Dbxref=GenBank:WP_037573213.1;Name=WP_037573213.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614146.1;locus_tag=RM588_RS03285;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_037573213.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	656129	656752	.	-	.	ID=gene-RM588_RS03290;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=RM588_RS03290;old_locus_tag=RM588_03290
NZ_JAVRJR010000001.1	Protein Homology	CDS	656129	656752	.	-	0	ID=cds-WP_037573210.1;Parent=gene-RM588_RS03290;Dbxref=GenBank:WP_037573210.1;Name=WP_037573210.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=RM588_RS03290;product=guanylate kinase;protein_id=WP_037573210.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	656914	658614	.	+	.	ID=gene-RM588_RS03295;Name=RM588_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03295;old_locus_tag=RM588_03295
NZ_JAVRJR010000001.1	Protein Homology	CDS	656914	658614	.	+	0	ID=cds-WP_311540611.1;Parent=gene-RM588_RS03295;Dbxref=GenBank:WP_311540611.1;Name=WP_311540611.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167388.1;locus_tag=RM588_RS03295;product=Rqc2 family fibronectin-binding protein;protein_id=WP_311540611.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	658630	659043	.	-	.	ID=gene-RM588_RS03300;Name=RM588_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03300;old_locus_tag=RM588_03300
NZ_JAVRJR010000001.1	Protein Homology	CDS	658630	659043	.	-	0	ID=cds-WP_233654915.1;Parent=gene-RM588_RS03300;Dbxref=GenBank:WP_233654915.1;Name=WP_233654915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614149.1;locus_tag=RM588_RS03300;product=VOC family protein;protein_id=WP_233654915.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	659387	659995	.	-	.	ID=gene-RM588_RS03305;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=RM588_RS03305;old_locus_tag=RM588_03305
NZ_JAVRJR010000001.1	Protein Homology	CDS	659387	659995	.	-	0	ID=cds-WP_037573202.1;Parent=gene-RM588_RS03305;Dbxref=GenBank:WP_037573202.1;Name=WP_037573202.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=RM588_RS03305;product=orotate phosphoribosyltransferase;protein_id=WP_037573202.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	659995	660687	.	-	.	ID=gene-RM588_RS03310;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=RM588_RS03310;old_locus_tag=RM588_03310
NZ_JAVRJR010000001.1	Protein Homology	CDS	659995	660687	.	-	0	ID=cds-WP_037573200.1;Parent=gene-RM588_RS03310;Dbxref=GenBank:WP_037573200.1;Name=WP_037573200.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381639.1;locus_tag=RM588_RS03310;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_037573200.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	660691	661608	.	-	.	ID=gene-RM588_RS03315;Name=RM588_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03315;old_locus_tag=RM588_03315
NZ_JAVRJR010000001.1	Protein Homology	CDS	660691	661608	.	-	0	ID=cds-WP_105962753.1;Parent=gene-RM588_RS03315;Dbxref=GenBank:WP_105962753.1;Name=WP_105962753.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220102.1;locus_tag=RM588_RS03315;product=dihydroorotate dehydrogenase;protein_id=WP_105962753.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	661605	662369	.	-	.	ID=gene-RM588_RS03320;Name=RM588_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03320;old_locus_tag=RM588_03320
NZ_JAVRJR010000001.1	Protein Homology	CDS	661605	662369	.	-	0	ID=cds-WP_037573197.1;Parent=gene-RM588_RS03320;Dbxref=GenBank:WP_037573197.1;Name=WP_037573197.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165547.1;locus_tag=RM588_RS03320;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_037573197.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	662382	665555	.	-	.	ID=gene-RM588_RS03325;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=RM588_RS03325;old_locus_tag=RM588_03325
NZ_JAVRJR010000001.1	Protein Homology	CDS	662382	665555	.	-	0	ID=cds-WP_103159270.1;Parent=gene-RM588_RS03325;Dbxref=GenBank:WP_103159270.1;Name=WP_103159270.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=RM588_RS03325;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_103159270.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	665548	666648	.	-	.	ID=gene-RM588_RS03330;Name=RM588_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03330;old_locus_tag=RM588_03330
NZ_JAVRJR010000001.1	Protein Homology	CDS	665548	666648	.	-	0	ID=cds-WP_233654916.1;Parent=gene-RM588_RS03330;Dbxref=GenBank:WP_233654916.1;Name=WP_233654916.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167399.1;locus_tag=RM588_RS03330;product=carbamoyl phosphate synthase small subunit;protein_id=WP_233654916.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	666648	667922	.	-	.	ID=gene-RM588_RS03335;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=RM588_RS03335;old_locus_tag=RM588_03335
NZ_JAVRJR010000001.1	Protein Homology	CDS	666648	667922	.	-	0	ID=cds-WP_105962751.1;Parent=gene-RM588_RS03335;Dbxref=GenBank:WP_105962751.1;Name=WP_105962751.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=RM588_RS03335;product=dihydroorotase;protein_id=WP_105962751.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	667936	668811	.	-	.	ID=gene-RM588_RS03340;Name=RM588_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03340;old_locus_tag=RM588_03340
NZ_JAVRJR010000001.1	Protein Homology	CDS	667936	668811	.	-	0	ID=cds-WP_233654921.1;Parent=gene-RM588_RS03340;Dbxref=GenBank:WP_233654921.1;Name=WP_233654921.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016173.1;locus_tag=RM588_RS03340;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_233654921.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	668831	670123	.	-	.	ID=gene-RM588_RS03345;Name=RM588_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03345;old_locus_tag=RM588_03345
NZ_JAVRJR010000001.1	Protein Homology	CDS	668831	670123	.	-	0	ID=cds-WP_103159266.1;Parent=gene-RM588_RS03345;Dbxref=GenBank:WP_103159266.1;Name=WP_103159266.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637156.1;locus_tag=RM588_RS03345;product=uracil-xanthine permease family protein;protein_id=WP_103159266.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	670285	670809	.	-	.	ID=gene-RM588_RS03350;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=RM588_RS03350;old_locus_tag=RM588_03350
NZ_JAVRJR010000001.1	Protein Homology	CDS	670285	670809	.	-	0	ID=cds-WP_037573946.1;Parent=gene-RM588_RS03350;Dbxref=GenBank:WP_037573946.1;Name=WP_037573946.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303315.1;locus_tag=RM588_RS03350;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_037573946.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	671104	672021	.	-	.	ID=gene-RM588_RS03355;Name=RM588_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03355;old_locus_tag=RM588_03355
NZ_JAVRJR010000001.1	Protein Homology	CDS	671104	672021	.	-	0	ID=cds-WP_037573189.1;Parent=gene-RM588_RS03355;Dbxref=GenBank:WP_037573189.1;Name=WP_037573189.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448828.1;locus_tag=RM588_RS03355;product=RluA family pseudouridine synthase;protein_id=WP_037573189.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	672031	672510	.	-	.	ID=gene-RM588_RS03360;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=RM588_RS03360;old_locus_tag=RM588_03360
NZ_JAVRJR010000001.1	Protein Homology	CDS	672031	672510	.	-	0	ID=cds-WP_037573187.1;Parent=gene-RM588_RS03360;Dbxref=GenBank:WP_037573187.1;Name=WP_037573187.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614161.1;locus_tag=RM588_RS03360;product=signal peptidase II;protein_id=WP_037573187.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	672630	672836	.	-	.	ID=gene-RM588_RS03365;Name=RM588_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03365;old_locus_tag=RM588_03365
NZ_JAVRJR010000001.1	GeneMarkS-2+	CDS	672630	672836	.	-	0	ID=cds-WP_037573185.1;Parent=gene-RM588_RS03365;Dbxref=GenBank:WP_037573185.1;Name=WP_037573185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS03365;product=hypothetical protein;protein_id=WP_037573185.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	673128	675875	.	-	.	ID=gene-RM588_RS03370;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=RM588_RS03370;old_locus_tag=RM588_03370
NZ_JAVRJR010000001.1	Protein Homology	CDS	673128	675875	.	-	0	ID=cds-WP_233654922.1;Parent=gene-RM588_RS03370;Dbxref=GenBank:WP_233654922.1;Name=WP_233654922.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=RM588_RS03370;product=isoleucine--tRNA ligase;protein_id=WP_233654922.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	676065	676700	.	-	.	ID=gene-RM588_RS03375;Name=RM588_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03375;old_locus_tag=RM588_03375
NZ_JAVRJR010000001.1	Protein Homology	CDS	676065	676700	.	-	0	ID=cds-WP_037573181.1;Parent=gene-RM588_RS03375;Dbxref=GenBank:WP_037573181.1;Name=WP_037573181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480602.1;locus_tag=RM588_RS03375;product=DivIVA domain-containing protein;protein_id=WP_037573181.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	676724	677494	.	-	.	ID=gene-RM588_RS03380;Name=RM588_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03380;old_locus_tag=RM588_03380
NZ_JAVRJR010000001.1	Protein Homology	CDS	676724	677494	.	-	0	ID=cds-WP_107363449.1;Parent=gene-RM588_RS03380;Dbxref=GenBank:WP_107363449.1;Name=WP_107363449.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614164.1;locus_tag=RM588_RS03380;product=YlmH family RNA-binding protein;protein_id=WP_107363449.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	677665	677958	.	-	.	ID=gene-RM588_RS03385;Name=RM588_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03385;old_locus_tag=RM588_03385
NZ_JAVRJR010000001.1	Protein Homology	CDS	677665	677958	.	-	0	ID=cds-WP_037573179.1;Parent=gene-RM588_RS03385;Dbxref=GenBank:WP_037573179.1;Name=WP_037573179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728996.1;locus_tag=RM588_RS03385;product=YggT family protein;protein_id=WP_037573179.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	677970	678578	.	-	.	ID=gene-RM588_RS03390;Name=RM588_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03390;old_locus_tag=RM588_03390
NZ_JAVRJR010000001.1	Protein Homology	CDS	677970	678578	.	-	0	ID=cds-WP_037573178.1;Parent=gene-RM588_RS03390;Dbxref=GenBank:WP_037573178.1;Name=WP_037573178.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483538.1;locus_tag=RM588_RS03390;product=cell division protein SepF;protein_id=WP_037573178.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	678584	679258	.	-	.	ID=gene-RM588_RS03395;Name=RM588_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03395;old_locus_tag=RM588_03395
NZ_JAVRJR010000001.1	Protein Homology	CDS	678584	679258	.	-	0	ID=cds-WP_105965231.1;Parent=gene-RM588_RS03395;Dbxref=GenBank:WP_105965231.1;Name=WP_105965231.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174546.1;locus_tag=RM588_RS03395;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_105965231.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	679284	680075	.	-	.	ID=gene-RM588_RS03400;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=RM588_RS03400;old_locus_tag=RM588_03400
NZ_JAVRJR010000001.1	Protein Homology	CDS	679284	680075	.	-	0	ID=cds-WP_037573175.1;Parent=gene-RM588_RS03400;Dbxref=GenBank:WP_037573175.1;Name=WP_037573175.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614176.1;locus_tag=RM588_RS03400;product=peptidoglycan editing factor PgeF;protein_id=WP_037573175.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	680236	681411	.	-	.	ID=gene-RM588_RS03405;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=RM588_RS03405;old_locus_tag=RM588_03405
NZ_JAVRJR010000001.1	Protein Homology	CDS	680236	681411	.	-	0	ID=cds-WP_037573172.1;Parent=gene-RM588_RS03405;Dbxref=GenBank:WP_037573172.1;Name=WP_037573172.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435258.1;locus_tag=RM588_RS03405;product=cell division protein FtsZ;protein_id=WP_037573172.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	681441	682880	.	-	.	ID=gene-RM588_RS03410;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=RM588_RS03410;old_locus_tag=RM588_03410
NZ_JAVRJR010000001.1	Protein Homology	CDS	681441	682880	.	-	0	ID=cds-WP_105965230.1;Parent=gene-RM588_RS03410;Dbxref=GenBank:WP_105965230.1;Name=WP_105965230.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614178.1;locus_tag=RM588_RS03410;product=cell division protein FtsA;protein_id=WP_105965230.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	682987	683874	.	-	.	ID=gene-RM588_RS03415;Name=RM588_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03415;old_locus_tag=RM588_03415
NZ_JAVRJR010000001.1	Protein Homology	CDS	682987	683874	.	-	0	ID=cds-WP_037573166.1;Parent=gene-RM588_RS03415;Dbxref=GenBank:WP_037573166.1;Name=WP_037573166.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169112.1;locus_tag=RM588_RS03415;product=cell division protein FtsQ/DivIB;protein_id=WP_037573166.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	683889	685238	.	-	.	ID=gene-RM588_RS03420;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=RM588_RS03420;old_locus_tag=RM588_03420
NZ_JAVRJR010000001.1	Protein Homology	CDS	683889	685238	.	-	0	ID=cds-WP_037573164.1;Parent=gene-RM588_RS03420;Dbxref=GenBank:WP_037573164.1;Name=WP_037573164.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=RM588_RS03420;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_037573164.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	685239	686204	.	-	.	ID=gene-RM588_RS03425;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=RM588_RS03425;old_locus_tag=RM588_03425
NZ_JAVRJR010000001.1	Protein Homology	CDS	685239	686204	.	-	0	ID=cds-WP_105962741.1;Parent=gene-RM588_RS03425;Dbxref=GenBank:WP_105962741.1;Name=WP_105962741.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728992.1;locus_tag=RM588_RS03425;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_105962741.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	686373	688514	.	-	.	ID=gene-RM588_RS03430;Name=RM588_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03430;old_locus_tag=RM588_03430
NZ_JAVRJR010000001.1	Protein Homology	CDS	686373	688514	.	-	0	ID=cds-WP_105965229.1;Parent=gene-RM588_RS03430;Dbxref=GenBank:WP_105965229.1;Name=WP_105965229.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365102.1;locus_tag=RM588_RS03430;product=penicillin-binding protein;protein_id=WP_105965229.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	688495	688914	.	-	.	ID=gene-RM588_RS03435;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=RM588_RS03435;old_locus_tag=RM588_03435
NZ_JAVRJR010000001.1	Protein Homology	CDS	688495	688914	.	-	0	ID=cds-WP_105962739.1;Parent=gene-RM588_RS03435;Dbxref=GenBank:WP_105962739.1;Name=WP_105962739.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169116.1;locus_tag=RM588_RS03435;product=cell division protein FtsL;protein_id=WP_105962739.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	688932	689867	.	-	.	ID=gene-RM588_RS03440;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=RM588_RS03440;old_locus_tag=RM588_03440
NZ_JAVRJR010000001.1	Protein Homology	CDS	688932	689867	.	-	0	ID=cds-WP_105965342.1;Parent=gene-RM588_RS03440;Dbxref=GenBank:WP_105965342.1;Name=WP_105965342.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=RM588_RS03440;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_105965342.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	689899	690330	.	-	.	ID=gene-RM588_RS03445;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=RM588_RS03445;old_locus_tag=RM588_03445
NZ_JAVRJR010000001.1	Protein Homology	CDS	689899	690330	.	-	0	ID=cds-WP_037573151.1;Parent=gene-RM588_RS03445;Dbxref=GenBank:WP_037573151.1;Name=WP_037573151.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=RM588_RS03445;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_037573151.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	690475	692088	.	-	.	ID=gene-RM588_RS03450;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=RM588_RS03450;old_locus_tag=RM588_03450
NZ_JAVRJR010000001.1	Protein Homology	CDS	690475	692088	.	-	0	ID=cds-WP_105962738.1;Parent=gene-RM588_RS03450;Dbxref=GenBank:WP_105962738.1;Name=WP_105962738.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483550.1;locus_tag=RM588_RS03450;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_105962738.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	692512	692967	.	+	.	ID=gene-RM588_RS03455;Name=RM588_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03455;old_locus_tag=RM588_03455
NZ_JAVRJR010000001.1	Protein Homology	CDS	692512	692967	.	+	0	ID=cds-WP_037573146.1;Parent=gene-RM588_RS03455;Dbxref=GenBank:WP_037573146.1;Name=WP_037573146.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424818.1;locus_tag=RM588_RS03455;product=N-acetyltransferase;protein_id=WP_037573146.1;transl_table=11
NZ_JAVRJR010000001.1	RefSeq	gene	693289	693420	.	-	.	ID=gene-RM588_RS03460;Name=RM588_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03460;old_locus_tag=RM588_03460
NZ_JAVRJR010000001.1	Protein Homology	CDS	693289	693420	.	-	0	ID=cds-WP_069191677.1-3;Parent=gene-RM588_RS03460;Dbxref=GenBank:WP_069191677.1;Name=WP_069191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169121.1;locus_tag=RM588_RS03460;product=beta-class phenol-soluble modulin;protein_id=WP_069191677.1;transl_table=11
##sequence-region NZ_JAVRJR010000020.1 1 784
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000020.1	RefSeq	region	1	784	.	+	.	ID=NZ_JAVRJR010000020.1:1..784;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000020.1	RefSeq	pseudogene	1	386	.	-	.	ID=gene-RM588_RS11280;Name=RM588_RS11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11280;old_locus_tag=RM588_11275;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJR010000020.1	Protein Homology	CDS	1	386	.	-	0	ID=cds-RM588_RS11280;Parent=gene-RM588_RS11280;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM588_RS11280;partial=true;product=phosphopentomutase;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJR010000020.1	RefSeq	gene	422	784	.	-	.	ID=gene-RM588_RS11285;Name=deoC;end_range=784,.;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM588_RS11285;old_locus_tag=RM588_11280;partial=true
NZ_JAVRJR010000020.1	Protein Homology	CDS	422	784	.	-	0	ID=cds-WP_311548224.1;Parent=gene-RM588_RS11285;Dbxref=GenBank:WP_311548224.1;Name=WP_311548224.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;end_range=784,.;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM588_RS11285;partial=true;product=deoxyribose-phosphate aldolase;protein_id=WP_311548224.1;transl_table=11
##sequence-region NZ_JAVRJR010000021.1 1 514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000021.1	RefSeq	region	1	514	.	+	.	ID=NZ_JAVRJR010000021.1:1..514;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000021.1	RefSeq	gene	60	514	.	-	.	ID=gene-RM588_RS11290;Name=RM588_RS11290;end_range=514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11290;old_locus_tag=RM588_11285;partial=true
NZ_JAVRJR010000021.1	Protein Homology	CDS	60	514	.	-	2	ID=cds-WP_311541202.1;Parent=gene-RM588_RS11290;Dbxref=GenBank:WP_311541202.1;Name=WP_311541202.1;Ontology_term=GO:0006313,GO:0004803;end_range=514,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM588_RS11290;partial=true;product=IS6-like element IS257 family transposase;protein_id=WP_311541202.1;transl_table=11
##sequence-region NZ_JAVRJR010000002.1 1 520712
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000002.1	RefSeq	region	1	520712	.	+	.	ID=NZ_JAVRJR010000002.1:1..520712;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000002.1	RefSeq	gene	238	1173	.	+	.	ID=gene-RM588_RS03465;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=RM588_RS03465;old_locus_tag=RM588_03465
NZ_JAVRJR010000002.1	Protein Homology	CDS	238	1173	.	+	0	ID=cds-WP_107372020.1;Parent=gene-RM588_RS03465;Dbxref=GenBank:WP_107372020.1;Name=WP_107372020.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303387.1;locus_tag=RM588_RS03465;product=ribonuclease HIII;protein_id=WP_107372020.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	1397	3802	.	-	.	ID=gene-RM588_RS03470;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=RM588_RS03470;old_locus_tag=RM588_03470
NZ_JAVRJR010000002.1	Protein Homology	CDS	1397	3802	.	-	0	ID=cds-WP_311548077.1;Parent=gene-RM588_RS03470;Dbxref=GenBank:WP_311548077.1;Name=WP_311548077.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728967.1;locus_tag=RM588_RS03470;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_311548077.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	3796	4860	.	-	.	ID=gene-RM588_RS03475;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=RM588_RS03475;old_locus_tag=RM588_03475
NZ_JAVRJR010000002.1	Protein Homology	CDS	3796	4860	.	-	0	ID=cds-WP_311548078.1;Parent=gene-RM588_RS03475;Dbxref=GenBank:WP_311548078.1;Name=WP_311548078.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499637.1;locus_tag=RM588_RS03475;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_311548078.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	5161	5907	.	-	.	ID=gene-RM588_RS03480;Name=RM588_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03480;old_locus_tag=RM588_03480
NZ_JAVRJR010000002.1	Protein Homology	CDS	5161	5907	.	-	0	ID=cds-WP_103159649.1;Parent=gene-RM588_RS03480;Dbxref=GenBank:WP_103159649.1;Name=WP_103159649.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435366.1;locus_tag=RM588_RS03480;product=TrmH family RNA methyltransferase;protein_id=WP_103159649.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	6603	6776	.	-	.	ID=gene-RM588_RS03485;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=RM588_RS03485;old_locus_tag=RM588_03485
NZ_JAVRJR010000002.1	Protein Homology	CDS	6603	6776	.	-	0	ID=cds-WP_037571680.1;Parent=gene-RM588_RS03485;Dbxref=GenBank:WP_037571680.1;Name=WP_037571680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=RM588_RS03485;product=50S ribosomal protein L32;protein_id=WP_037571680.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	6819	7361	.	-	.	ID=gene-RM588_RS03490;Name=RM588_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03490;old_locus_tag=RM588_03490
NZ_JAVRJR010000002.1	Protein Homology	CDS	6819	7361	.	-	0	ID=cds-WP_037571683.1;Parent=gene-RM588_RS03490;Dbxref=GenBank:WP_037571683.1;Name=WP_037571683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168154.1;locus_tag=RM588_RS03490;product=YceD family protein;protein_id=WP_037571683.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	7488	8633	.	+	.	ID=gene-RM588_RS03495;Name=RM588_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03495;old_locus_tag=RM588_03495
NZ_JAVRJR010000002.1	Protein Homology	CDS	7488	8633	.	+	0	ID=cds-WP_105965932.1;Parent=gene-RM588_RS03495;Dbxref=GenBank:WP_105965932.1;Name=WP_105965932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276103.1;locus_tag=RM588_RS03495;product=nucleotidyltransferase;protein_id=WP_105965932.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	9079	9573	.	-	.	ID=gene-RM588_RS03500;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=RM588_RS03500;old_locus_tag=RM588_03500
NZ_JAVRJR010000002.1	Protein Homology	CDS	9079	9573	.	-	0	ID=cds-WP_311541303.1;Parent=gene-RM588_RS03500;Dbxref=GenBank:WP_311541303.1;Name=WP_311541303.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614217.1;locus_tag=RM588_RS03500;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_311541303.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	9566	10117	.	-	.	ID=gene-RM588_RS03505;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=RM588_RS03505;old_locus_tag=RM588_03505
NZ_JAVRJR010000002.1	Protein Homology	CDS	9566	10117	.	-	0	ID=cds-WP_037571691.1;Parent=gene-RM588_RS03505;Dbxref=GenBank:WP_037571691.1;Name=WP_037571691.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168157.1;locus_tag=RM588_RS03505;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_037571691.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	10177	10566	.	+	.	ID=gene-RM588_RS03510;Name=RM588_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03510;old_locus_tag=RM588_03510
NZ_JAVRJR010000002.1	Protein Homology	CDS	10177	10566	.	+	0	ID=cds-WP_037571694.1;Parent=gene-RM588_RS03510;Dbxref=GenBank:WP_037571694.1;Name=WP_037571694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=RM588_RS03510;product=DUF7147 family protein;protein_id=WP_037571694.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	10567	10815	.	-	.	ID=gene-RM588_RS03515;Name=RM588_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03515;old_locus_tag=RM588_03515
NZ_JAVRJR010000002.1	Protein Homology	CDS	10567	10815	.	-	0	ID=cds-WP_037571696.1;Parent=gene-RM588_RS03515;Dbxref=GenBank:WP_037571696.1;Name=WP_037571696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469276.1;locus_tag=RM588_RS03515;product=DUF2129 domain-containing protein;protein_id=WP_037571696.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	10904	11812	.	+	.	ID=gene-RM588_RS03520;Name=RM588_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03520;old_locus_tag=RM588_03520
NZ_JAVRJR010000002.1	Protein Homology	CDS	10904	11812	.	+	0	ID=cds-WP_311548079.1;Parent=gene-RM588_RS03520;Dbxref=GenBank:WP_311548079.1;Name=WP_311548079.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728963.1;locus_tag=RM588_RS03520;product=lysophosphatidylglycerol phospholipase D;protein_id=WP_311548079.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	11994	12431	.	-	.	ID=gene-RM588_RS03525;Name=RM588_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03525;old_locus_tag=RM588_03525
NZ_JAVRJR010000002.1	Protein Homology	CDS	11994	12431	.	-	0	ID=cds-WP_037571699.1;Parent=gene-RM588_RS03525;Dbxref=GenBank:WP_037571699.1;Name=WP_037571699.1;Ontology_term=GO:0030420,GO:0043934;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA,sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462472.1;locus_tag=RM588_RS03525;product=YlbF/YmcA family competence regulator;protein_id=WP_037571699.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	12424	13497	.	-	.	ID=gene-RM588_RS03530;Name=RM588_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03530;old_locus_tag=RM588_03530
NZ_JAVRJR010000002.1	Protein Homology	CDS	12424	13497	.	-	0	ID=cds-WP_311541304.1;Parent=gene-RM588_RS03530;Dbxref=GenBank:WP_311541304.1;Name=WP_311541304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168162.1;locus_tag=RM588_RS03530;product=CAP-associated domain-containing protein;protein_id=WP_311541304.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	13623	14084	.	-	.	ID=gene-RM588_RS03535;Name=RM588_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03535;old_locus_tag=RM588_03535
NZ_JAVRJR010000002.1	Protein Homology	CDS	13623	14084	.	-	0	ID=cds-WP_037571713.1;Parent=gene-RM588_RS03535;Dbxref=GenBank:WP_037571713.1;Name=WP_037571713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=RM588_RS03535;product=DUF420 domain-containing protein;protein_id=WP_037571713.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	14109	15020	.	-	.	ID=gene-RM588_RS03540;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=RM588_RS03540;old_locus_tag=RM588_03540
NZ_JAVRJR010000002.1	Protein Homology	CDS	14109	15020	.	-	0	ID=cds-WP_037571715.1;Parent=gene-RM588_RS03540;Dbxref=GenBank:WP_037571715.1;Name=WP_037571715.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168165.1;locus_tag=RM588_RS03540;product=heme o synthase;protein_id=WP_037571715.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	15234	16142	.	+	.	ID=gene-RM588_RS03545;Name=RM588_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03545;old_locus_tag=RM588_03545
NZ_JAVRJR010000002.1	Protein Homology	CDS	15234	16142	.	+	0	ID=cds-WP_037571718.1;Parent=gene-RM588_RS03545;Dbxref=GenBank:WP_037571718.1;Name=WP_037571718.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830131.1;locus_tag=RM588_RS03545;product=COX15/CtaA family protein;protein_id=WP_037571718.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	16197	19646	.	-	.	ID=gene-RM588_RS03550;Name=RM588_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03550;old_locus_tag=RM588_03550
NZ_JAVRJR010000002.1	Protein Homology	CDS	16197	19646	.	-	0	ID=cds-WP_311541306.1;Parent=gene-RM588_RS03550;Dbxref=GenBank:WP_311541306.1;Name=WP_311541306.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470251.1;locus_tag=RM588_RS03550;product=pyruvate carboxylase;protein_id=WP_311541306.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	19911	21131	.	-	.	ID=gene-RM588_RS03555;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=RM588_RS03555;old_locus_tag=RM588_03555
NZ_JAVRJR010000002.1	Protein Homology	CDS	19911	21131	.	-	0	ID=cds-WP_037571723.1;Parent=gene-RM588_RS03555;Dbxref=GenBank:WP_037571723.1;Name=WP_037571723.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424780.1;locus_tag=RM588_RS03555;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_037571723.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	21208	21483	.	-	.	ID=gene-RM588_RS03560;Name=RM588_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03560;old_locus_tag=RM588_03560
NZ_JAVRJR010000002.1	Protein Homology	CDS	21208	21483	.	-	0	ID=cds-WP_037571726.1;Parent=gene-RM588_RS03560;Dbxref=GenBank:WP_037571726.1;Name=WP_037571726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830079.1;locus_tag=RM588_RS03560;product=Fpa/YlaN family protein;protein_id=WP_037571726.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	21619	22101	.	+	.	ID=gene-RM588_RS03565;Name=RM588_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03565;old_locus_tag=RM588_03565
NZ_JAVRJR010000002.1	Protein Homology	CDS	21619	22101	.	+	0	ID=cds-WP_037571730.1;Parent=gene-RM588_RS03565;Dbxref=GenBank:WP_037571730.1;Name=WP_037571730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499607.1;locus_tag=RM588_RS03565;product=hypothetical protein;protein_id=WP_037571730.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	22102	22287	.	+	.	ID=gene-RM588_RS03570;Name=RM588_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03570;old_locus_tag=RM588_03570
NZ_JAVRJR010000002.1	Protein Homology	CDS	22102	22287	.	+	0	ID=cds-WP_037571734.1;Parent=gene-RM588_RS03570;Dbxref=GenBank:WP_037571734.1;Name=WP_037571734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462703.1;locus_tag=RM588_RS03570;product=DUF2197 domain-containing protein;protein_id=WP_037571734.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	22546	23670	.	-	.	ID=gene-RM588_RS03575;Name=RM588_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03575;old_locus_tag=RM588_03575
NZ_JAVRJR010000002.1	Protein Homology	CDS	22546	23670	.	-	0	ID=cds-WP_037571737.1;Parent=gene-RM588_RS03575;Dbxref=GenBank:WP_037571737.1;Name=WP_037571737.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439060.1;locus_tag=RM588_RS03575;product=NADH-dependent flavin oxidoreductase;protein_id=WP_037571737.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	23878	25725	.	-	.	ID=gene-RM588_RS03580;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=RM588_RS03580;old_locus_tag=RM588_03580
NZ_JAVRJR010000002.1	Protein Homology	CDS	23878	25725	.	-	0	ID=cds-WP_037571740.1;Parent=gene-RM588_RS03580;Dbxref=GenBank:WP_037571740.1;Name=WP_037571740.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499605.1;locus_tag=RM588_RS03580;product=translational GTPase TypA;protein_id=WP_037571740.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	25817	26008	.	+	.	ID=gene-RM588_RS03585;Name=RM588_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03585;old_locus_tag=RM588_03585
NZ_JAVRJR010000002.1	Protein Homology	CDS	25817	26008	.	+	0	ID=cds-WP_229717287.1;Parent=gene-RM588_RS03585;Dbxref=GenBank:WP_229717287.1;Name=WP_229717287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810616.1;locus_tag=RM588_RS03585;product=DUF5325 family protein;protein_id=WP_229717287.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	26200	27012	.	-	.	ID=gene-RM588_RS03590;Name=RM588_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03590;old_locus_tag=RM588_03590
NZ_JAVRJR010000002.1	Protein Homology	CDS	26200	27012	.	-	0	ID=cds-WP_037571744.1;Parent=gene-RM588_RS03590;Dbxref=GenBank:WP_037571744.1;Name=WP_037571744.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480537.1;locus_tag=RM588_RS03590;product=inositol monophosphatase family protein;protein_id=WP_037571744.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	27128	27739	.	+	.	ID=gene-RM588_RS03595;Name=RM588_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03595;old_locus_tag=RM588_03595
NZ_JAVRJR010000002.1	Protein Homology	CDS	27128	27739	.	+	0	ID=cds-WP_037571745.1;Parent=gene-RM588_RS03595;Dbxref=GenBank:WP_037571745.1;Name=WP_037571745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303407.1;locus_tag=RM588_RS03595;product=YktB family protein;protein_id=WP_037571745.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	28028	28834	.	-	.	ID=gene-RM588_RS03600;Name=RM588_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03600;old_locus_tag=RM588_03600
NZ_JAVRJR010000002.1	Protein Homology	CDS	28028	28834	.	-	0	ID=cds-WP_037571746.1;Parent=gene-RM588_RS03600;Dbxref=GenBank:WP_037571746.1;Name=WP_037571746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024670.7;locus_tag=RM588_RS03600;product=DUF4064 domain-containing protein;protein_id=WP_037571746.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	29076	30143	.	-	.	ID=gene-RM588_RS03605;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=RM588_RS03605;old_locus_tag=RM588_03605
NZ_JAVRJR010000002.1	Protein Homology	CDS	29076	30143	.	-	0	ID=cds-WP_037571747.1;Parent=gene-RM588_RS03605;Dbxref=GenBank:WP_037571747.1;Name=WP_037571747.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614239.1;locus_tag=RM588_RS03605;product=lipoteichoic acid stability factor AuxB;protein_id=WP_037571747.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	30208	31278	.	-	.	ID=gene-RM588_RS03610;Name=RM588_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03610;old_locus_tag=RM588_03610
NZ_JAVRJR010000002.1	Protein Homology	CDS	30208	31278	.	-	0	ID=cds-WP_037571748.1;Parent=gene-RM588_RS03610;Dbxref=GenBank:WP_037571748.1;Name=WP_037571748.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614240.1;locus_tag=RM588_RS03610;product=ABC transporter substrate-binding protein;protein_id=WP_037571748.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	31275	32087	.	-	.	ID=gene-RM588_RS03615;Name=RM588_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03615;old_locus_tag=RM588_03615
NZ_JAVRJR010000002.1	Protein Homology	CDS	31275	32087	.	-	0	ID=cds-WP_037571750.1;Parent=gene-RM588_RS03615;Dbxref=GenBank:WP_037571750.1;Name=WP_037571750.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614241.1;locus_tag=RM588_RS03615;product=ABC transporter permease;protein_id=WP_037571750.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	32084	32890	.	-	.	ID=gene-RM588_RS03620;Name=RM588_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03620;old_locus_tag=RM588_03620
NZ_JAVRJR010000002.1	Protein Homology	CDS	32084	32890	.	-	0	ID=cds-WP_311541307.1;Parent=gene-RM588_RS03620;Dbxref=GenBank:WP_311541307.1;Name=WP_311541307.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728958.1;locus_tag=RM588_RS03620;product=ABC transporter permease;protein_id=WP_311541307.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	32877	33977	.	-	.	ID=gene-RM588_RS03625;Name=RM588_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03625;old_locus_tag=RM588_03625
NZ_JAVRJR010000002.1	Protein Homology	CDS	32877	33977	.	-	0	ID=cds-WP_037571755.1;Parent=gene-RM588_RS03625;Dbxref=GenBank:WP_037571755.1;Name=WP_037571755.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168181.1;locus_tag=RM588_RS03625;product=ABC transporter ATP-binding protein;protein_id=WP_037571755.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	33989	34528	.	-	.	ID=gene-RM588_RS03630;Name=RM588_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03630;old_locus_tag=RM588_03630
NZ_JAVRJR010000002.1	Protein Homology	CDS	33989	34528	.	-	0	ID=cds-WP_037571758.1;Parent=gene-RM588_RS03630;Dbxref=GenBank:WP_037571758.1;Name=WP_037571758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190019.1;locus_tag=RM588_RS03630;product=helix-turn-helix domain-containing protein;protein_id=WP_037571758.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	34632	34904	.	-	.	ID=gene-RM588_RS03635;Name=RM588_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03635;old_locus_tag=RM588_03635
NZ_JAVRJR010000002.1	Protein Homology	CDS	34632	34904	.	-	0	ID=cds-WP_037571766.1;Parent=gene-RM588_RS03635;Dbxref=GenBank:WP_037571766.1;Name=WP_037571766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165574.1;locus_tag=RM588_RS03635;product=UPF0223 family protein;protein_id=WP_037571766.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	34998	36404	.	-	.	ID=gene-RM588_RS03640;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM588_RS03640;old_locus_tag=RM588_03640
NZ_JAVRJR010000002.1	Protein Homology	CDS	34998	36404	.	-	0	ID=cds-WP_105965929.1;Parent=gene-RM588_RS03640;Dbxref=GenBank:WP_105965929.1;Name=WP_105965929.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=RM588_RS03640;product=dihydrolipoyl dehydrogenase;protein_id=WP_105965929.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	36408	37697	.	-	.	ID=gene-RM588_RS03645;Name=RM588_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03645;old_locus_tag=RM588_03645
NZ_JAVRJR010000002.1	Protein Homology	CDS	36408	37697	.	-	0	ID=cds-WP_037571772.1;Parent=gene-RM588_RS03645;Dbxref=GenBank:WP_037571772.1;Name=WP_037571772.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=RM588_RS03645;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_037571772.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	37880	38857	.	-	.	ID=gene-RM588_RS03650;Name=RM588_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03650;old_locus_tag=RM588_03650
NZ_JAVRJR010000002.1	Protein Homology	CDS	37880	38857	.	-	0	ID=cds-WP_037571775.1;Parent=gene-RM588_RS03650;Dbxref=GenBank:WP_037571775.1;Name=WP_037571775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=RM588_RS03650;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_037571775.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	38861	39973	.	-	.	ID=gene-RM588_RS03655;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=RM588_RS03655;old_locus_tag=RM588_03655
NZ_JAVRJR010000002.1	Protein Homology	CDS	38861	39973	.	-	0	ID=cds-WP_037571778.1;Parent=gene-RM588_RS03655;Dbxref=GenBank:WP_037571778.1;Name=WP_037571778.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=RM588_RS03655;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_037571778.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	40134	40763	.	-	.	ID=gene-RM588_RS03660;Name=RM588_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03660;old_locus_tag=RM588_03660
NZ_JAVRJR010000002.1	Protein Homology	CDS	40134	40763	.	-	0	ID=cds-WP_037571785.1;Parent=gene-RM588_RS03660;Dbxref=GenBank:WP_037571785.1;Name=WP_037571785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728956.1;locus_tag=RM588_RS03660;product=YkyA family protein;protein_id=WP_037571785.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	40888	41439	.	+	.	ID=gene-RM588_RS03665;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM588_RS03665;old_locus_tag=RM588_03665
NZ_JAVRJR010000002.1	Protein Homology	CDS	40888	41439	.	+	0	ID=cds-WP_037571788.1;Parent=gene-RM588_RS03665;Dbxref=GenBank:WP_037571788.1;Name=WP_037571788.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564842.1;locus_tag=RM588_RS03665;product=peptide deformylase;protein_id=WP_037571788.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	41501	41770	.	-	.	ID=gene-RM588_RS03670;Name=RM588_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03670;old_locus_tag=RM588_03670
NZ_JAVRJR010000002.1	Protein Homology	CDS	41501	41770	.	-	0	ID=cds-WP_037571790.1;Parent=gene-RM588_RS03670;Dbxref=GenBank:WP_037571790.1;Name=WP_037571790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165581.1;locus_tag=RM588_RS03670;product=hypothetical protein;protein_id=WP_037571790.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	42090	42305	.	+	.	ID=gene-RM588_RS03675;Name=RM588_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03675;old_locus_tag=RM588_03675
NZ_JAVRJR010000002.1	Protein Homology	CDS	42090	42305	.	+	0	ID=cds-WP_037571792.1;Parent=gene-RM588_RS03675;Dbxref=GenBank:WP_037571792.1;Name=WP_037571792.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=RM588_RS03675;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_037571792.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	42305	43987	.	+	.	ID=gene-RM588_RS03680;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=RM588_RS03680;old_locus_tag=RM588_03680
NZ_JAVRJR010000002.1	Protein Homology	CDS	42305	43987	.	+	0	ID=cds-WP_103159440.1;Parent=gene-RM588_RS03680;Dbxref=GenBank:WP_103159440.1;Name=WP_103159440.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614255.1;locus_tag=RM588_RS03680;product=ribonuclease J1;protein_id=WP_103159440.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	44085	44744	.	-	.	ID=gene-RM588_RS03685;Name=RM588_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03685;old_locus_tag=RM588_03685
NZ_JAVRJR010000002.1	Protein Homology	CDS	44085	44744	.	-	0	ID=cds-WP_037571801.1;Parent=gene-RM588_RS03685;Dbxref=GenBank:WP_037571801.1;Name=WP_037571801.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614257.1;locus_tag=RM588_RS03685;product=potassium channel family protein;protein_id=WP_037571801.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	44917	45936	.	-	.	ID=gene-RM588_RS03690;Name=RM588_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03690;old_locus_tag=RM588_03690
NZ_JAVRJR010000002.1	Protein Homology	CDS	44917	45936	.	-	0	ID=cds-WP_119505212.1;Parent=gene-RM588_RS03690;Dbxref=GenBank:WP_119505212.1;Name=WP_119505212.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=RM588_RS03690;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_119505212.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	45933	47285	.	-	.	ID=gene-RM588_RS03695;Name=RM588_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03695;old_locus_tag=RM588_03695
NZ_JAVRJR010000002.1	Protein Homology	CDS	45933	47285	.	-	0	ID=cds-WP_103159442.1;Parent=gene-RM588_RS03695;Dbxref=GenBank:WP_103159442.1;Name=WP_103159442.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424752.1;locus_tag=RM588_RS03695;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_103159442.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	47508	47735	.	+	.	ID=gene-RM588_RS03700;Name=RM588_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03700;old_locus_tag=RM588_03700
NZ_JAVRJR010000002.1	Protein Homology	CDS	47508	47735	.	+	0	ID=cds-WP_037571811.1;Parent=gene-RM588_RS03700;Dbxref=GenBank:WP_037571811.1;Name=WP_037571811.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289617.1;locus_tag=RM588_RS03700;product=glutaredoxin family protein;protein_id=WP_037571811.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	47859	49580	.	-	.	ID=gene-RM588_RS03705;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=RM588_RS03705;old_locus_tag=RM588_03705
NZ_JAVRJR010000002.1	Protein Homology	CDS	47859	49580	.	-	0	ID=cds-WP_037571813.1;Parent=gene-RM588_RS03705;Dbxref=GenBank:WP_037571813.1;Name=WP_037571813.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219575.1;locus_tag=RM588_RS03705;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_037571813.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	49580	49846	.	-	.	ID=gene-RM588_RS03710;Name=RM588_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03710;old_locus_tag=RM588_03710
NZ_JAVRJR010000002.1	Protein Homology	CDS	49580	49846	.	-	0	ID=cds-WP_037566021.1;Parent=gene-RM588_RS03710;Dbxref=GenBank:WP_037566021.1;Name=WP_037566021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=RM588_RS03710;product=phosphocarrier protein HPr;protein_id=WP_037566021.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	50004	50534	.	-	.	ID=gene-RM588_RS03715;Name=RM588_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03715;old_locus_tag=RM588_03715
NZ_JAVRJR010000002.1	Protein Homology	CDS	50004	50534	.	-	0	ID=cds-WP_037571815.1;Parent=gene-RM588_RS03715;Dbxref=GenBank:WP_037571815.1;Name=WP_037571815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165589.1;locus_tag=RM588_RS03715;product=hypothetical protein;protein_id=WP_037571815.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	50578	51762	.	-	.	ID=gene-RM588_RS03720;Name=RM588_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03720;old_locus_tag=RM588_03720
NZ_JAVRJR010000002.1	Protein Homology	CDS	50578	51762	.	-	0	ID=cds-WP_037571818.1;Parent=gene-RM588_RS03720;Dbxref=GenBank:WP_037571818.1;Name=WP_037571818.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899956.1;locus_tag=RM588_RS03720;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_037571818.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	51888	53231	.	-	.	ID=gene-RM588_RS03725;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=RM588_RS03725;old_locus_tag=RM588_03725
NZ_JAVRJR010000002.1	Protein Homology	CDS	51888	53231	.	-	0	ID=cds-WP_037571820.1;Parent=gene-RM588_RS03725;Dbxref=GenBank:WP_037571820.1;Name=WP_037571820.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424746.1;locus_tag=RM588_RS03725;product=lipoteichoic acid stability factor AuxA;protein_id=WP_037571820.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	53557	53688	.	+	.	ID=gene-RM588_RS03730;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=RM588_RS03730;old_locus_tag=RM588_03730
NZ_JAVRJR010000002.1	Protein Homology	CDS	53557	53688	.	+	0	ID=cds-WP_194434871.1;Parent=gene-RM588_RS03730;Dbxref=GenBank:WP_194434871.1;Name=WP_194434871.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165592.1;locus_tag=RM588_RS03730;product=glycopeptide resistance-associated protein GraF;protein_id=WP_194434871.1;transl_table=11
NZ_JAVRJR010000002.1	cmsearch	riboswitch	53882	53982	.	+	.	ID=id-NZ_JAVRJR010000002.1:53882..53982;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000002.1	RefSeq	gene	54097	54678	.	+	.	ID=gene-RM588_RS03735;Name=RM588_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03735;old_locus_tag=RM588_03735
NZ_JAVRJR010000002.1	Protein Homology	CDS	54097	54678	.	+	0	ID=cds-WP_037571822.1;Parent=gene-RM588_RS03735;Dbxref=GenBank:WP_037571822.1;Name=WP_037571822.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168261.1;locus_tag=RM588_RS03735;product=ECF transporter S component;protein_id=WP_037571822.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	54691	56088	.	+	.	ID=gene-RM588_RS03740;Name=RM588_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03740;old_locus_tag=RM588_03740
NZ_JAVRJR010000002.1	Protein Homology	CDS	54691	56088	.	+	0	ID=cds-WP_103159444.1;Parent=gene-RM588_RS03740;Dbxref=GenBank:WP_103159444.1;Name=WP_103159444.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614268.1;locus_tag=RM588_RS03740;product=ABC transporter ATP-binding protein;protein_id=WP_103159444.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	56085	56876	.	+	.	ID=gene-RM588_RS03745;Name=RM588_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03745;old_locus_tag=RM588_03745
NZ_JAVRJR010000002.1	Protein Homology	CDS	56085	56876	.	+	0	ID=cds-WP_037571827.1;Parent=gene-RM588_RS03745;Dbxref=GenBank:WP_037571827.1;Name=WP_037571827.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168263.1;locus_tag=RM588_RS03745;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_037571827.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	57696	58937	.	-	.	ID=gene-RM588_RS03750;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=RM588_RS03750;old_locus_tag=RM588_03750
NZ_JAVRJR010000002.1	Protein Homology	CDS	57696	58937	.	-	0	ID=cds-WP_037571830.1;Parent=gene-RM588_RS03750;Dbxref=GenBank:WP_037571830.1;Name=WP_037571830.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448142.1;locus_tag=RM588_RS03750;product=phosphoribosylamine--glycine ligase;protein_id=WP_037571830.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	58952	60430	.	-	.	ID=gene-RM588_RS03755;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=RM588_RS03755;old_locus_tag=RM588_03755
NZ_JAVRJR010000002.1	Protein Homology	CDS	58952	60430	.	-	0	ID=cds-WP_037571833.1;Parent=gene-RM588_RS03755;Dbxref=GenBank:WP_037571833.1;Name=WP_037571833.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462693.1;locus_tag=RM588_RS03755;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_037571833.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	60443	61009	.	-	.	ID=gene-RM588_RS03760;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=RM588_RS03760;old_locus_tag=RM588_03760
NZ_JAVRJR010000002.1	Protein Homology	CDS	60443	61009	.	-	0	ID=cds-WP_037571836.1;Parent=gene-RM588_RS03760;Dbxref=GenBank:WP_037571836.1;Name=WP_037571836.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000238664.1;locus_tag=RM588_RS03760;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_037571836.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	61012	62040	.	-	.	ID=gene-RM588_RS03765;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=RM588_RS03765;old_locus_tag=RM588_03765
NZ_JAVRJR010000002.1	Protein Homology	CDS	61012	62040	.	-	0	ID=cds-WP_037571839.1;Parent=gene-RM588_RS03765;Dbxref=GenBank:WP_037571839.1;Name=WP_037571839.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175767.1;locus_tag=RM588_RS03765;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_037571839.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	62045	63466	.	-	.	ID=gene-RM588_RS03770;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=RM588_RS03770;old_locus_tag=RM588_03770
NZ_JAVRJR010000002.1	Protein Homology	CDS	62045	63466	.	-	0	ID=cds-WP_037571849.1;Parent=gene-RM588_RS03770;Dbxref=GenBank:WP_037571849.1;Name=WP_037571849.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167835.1;locus_tag=RM588_RS03770;product=amidophosphoribosyltransferase;protein_id=WP_037571849.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	63445	65634	.	-	.	ID=gene-RM588_RS03775;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=RM588_RS03775;old_locus_tag=RM588_03775
NZ_JAVRJR010000002.1	Protein Homology	CDS	63445	65634	.	-	0	ID=cds-WP_037571851.1;Parent=gene-RM588_RS03775;Dbxref=GenBank:WP_037571851.1;Name=WP_037571851.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=RM588_RS03775;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_037571851.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	65627	66298	.	-	.	ID=gene-RM588_RS03780;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=RM588_RS03780;old_locus_tag=RM588_03780
NZ_JAVRJR010000002.1	Protein Homology	CDS	65627	66298	.	-	0	ID=cds-WP_037571853.1;Parent=gene-RM588_RS03780;Dbxref=GenBank:WP_037571853.1;Name=WP_037571853.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=RM588_RS03780;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_037571853.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	66298	66567	.	-	.	ID=gene-RM588_RS03785;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=RM588_RS03785;old_locus_tag=RM588_03785
NZ_JAVRJR010000002.1	Protein Homology	CDS	66298	66567	.	-	0	ID=cds-WP_037571855.1;Parent=gene-RM588_RS03785;Dbxref=GenBank:WP_037571855.1;Name=WP_037571855.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=RM588_RS03785;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_037571855.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	66569	67276	.	-	.	ID=gene-RM588_RS03790;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=RM588_RS03790;old_locus_tag=RM588_03790
NZ_JAVRJR010000002.1	Protein Homology	CDS	66569	67276	.	-	0	ID=cds-WP_037571857.1;Parent=gene-RM588_RS03790;Dbxref=GenBank:WP_037571857.1;Name=WP_037571857.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167838.1;locus_tag=RM588_RS03790;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_037571857.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	67273	68400	.	-	.	ID=gene-RM588_RS03795;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=RM588_RS03795;old_locus_tag=RM588_03795
NZ_JAVRJR010000002.1	Protein Homology	CDS	67273	68400	.	-	0	ID=cds-WP_037571859.1;Parent=gene-RM588_RS03795;Dbxref=GenBank:WP_037571859.1;Name=WP_037571859.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637035.1;locus_tag=RM588_RS03795;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_037571859.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	68387	68869	.	-	.	ID=gene-RM588_RS03800;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=RM588_RS03800;old_locus_tag=RM588_03800
NZ_JAVRJR010000002.1	Protein Homology	CDS	68387	68869	.	-	0	ID=cds-WP_037573011.1;Parent=gene-RM588_RS03800;Dbxref=GenBank:WP_037573011.1;Name=WP_037573011.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=RM588_RS03800;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_037573011.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	69081	69938	.	+	.	ID=gene-RM588_RS03805;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=RM588_RS03805;old_locus_tag=RM588_03805
NZ_JAVRJR010000002.1	Protein Homology	CDS	69081	69938	.	+	0	ID=cds-WP_037571861.1;Parent=gene-RM588_RS03805;Dbxref=GenBank:WP_037571861.1;Name=WP_037571861.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=RM588_RS03805;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_037571861.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	70095	71240	.	-	.	ID=gene-RM588_RS03810;Name=RM588_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03810;old_locus_tag=RM588_03810
NZ_JAVRJR010000002.1	Protein Homology	CDS	70095	71240	.	-	0	ID=cds-WP_311548080.1;Parent=gene-RM588_RS03810;Dbxref=GenBank:WP_311548080.1;Name=WP_311548080.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=RM588_RS03810;product=globin domain-containing protein;protein_id=WP_311548080.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	71447	71785	.	+	.	ID=gene-RM588_RS03815;Name=RM588_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03815;old_locus_tag=RM588_03815
NZ_JAVRJR010000002.1	Protein Homology	CDS	71447	71785	.	+	0	ID=cds-WP_037571867.1;Parent=gene-RM588_RS03815;Dbxref=GenBank:WP_037571867.1;Name=WP_037571867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614283.1;locus_tag=RM588_RS03815;product=immunoglobulin-like domain-containing protein;protein_id=WP_037571867.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	72257	73348	.	+	.	ID=gene-RM588_RS03820;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=RM588_RS03820;old_locus_tag=RM588_03820
NZ_JAVRJR010000002.1	Protein Homology	CDS	72257	73348	.	+	0	ID=cds-WP_037571870.1;Parent=gene-RM588_RS03820;Dbxref=GenBank:WP_037571870.1;Name=WP_037571870.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467596.1;locus_tag=RM588_RS03820;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_037571870.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	73351	75339	.	+	.	ID=gene-RM588_RS03825;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=RM588_RS03825;old_locus_tag=RM588_03825
NZ_JAVRJR010000002.1	Protein Homology	CDS	73351	75339	.	+	0	ID=cds-WP_037573014.1;Parent=gene-RM588_RS03825;Dbxref=GenBank:WP_037573014.1;Name=WP_037573014.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=RM588_RS03825;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_037573014.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	75329	75934	.	+	.	ID=gene-RM588_RS03830;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=RM588_RS03830;old_locus_tag=RM588_03830
NZ_JAVRJR010000002.1	Protein Homology	CDS	75329	75934	.	+	0	ID=cds-WP_037571873.1;Parent=gene-RM588_RS03830;Dbxref=GenBank:WP_037571873.1;Name=WP_037571873.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=RM588_RS03830;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_037571873.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	75931	76221	.	+	.	ID=gene-RM588_RS03835;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=RM588_RS03835;old_locus_tag=RM588_03835
NZ_JAVRJR010000002.1	Protein Homology	CDS	75931	76221	.	+	0	ID=cds-WP_037571876.1;Parent=gene-RM588_RS03835;Dbxref=GenBank:WP_037571876.1;Name=WP_037571876.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=RM588_RS03835;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_037571876.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	76536	77879	.	-	.	ID=gene-RM588_RS03840;Name=RM588_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03840;old_locus_tag=RM588_03840
NZ_JAVRJR010000002.1	Protein Homology	CDS	76536	77879	.	-	0	ID=cds-WP_037571879.1;Parent=gene-RM588_RS03840;Dbxref=GenBank:WP_037571879.1;Name=WP_037571879.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728940.1;locus_tag=RM588_RS03840;product=glycosyltransferase;protein_id=WP_037571879.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	77897	78715	.	-	.	ID=gene-RM588_RS03845;Name=RM588_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03845;old_locus_tag=RM588_03845
NZ_JAVRJR010000002.1	Protein Homology	CDS	77897	78715	.	-	0	ID=cds-WP_037571882.1;Parent=gene-RM588_RS03845;Dbxref=GenBank:WP_037571882.1;Name=WP_037571882.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220384.1;locus_tag=RM588_RS03845;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_037571882.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	78735	79652	.	-	.	ID=gene-RM588_RS03850;Name=RM588_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03850;old_locus_tag=RM588_03850
NZ_JAVRJR010000002.1	Protein Homology	CDS	78735	79652	.	-	0	ID=cds-WP_037571885.1;Parent=gene-RM588_RS03850;Dbxref=GenBank:WP_037571885.1;Name=WP_037571885.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167467.1;locus_tag=RM588_RS03850;product=ABC transporter ATP-binding protein;protein_id=WP_037571885.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	79658	80848	.	-	.	ID=gene-RM588_RS03855;Name=RM588_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03855;old_locus_tag=RM588_03855
NZ_JAVRJR010000002.1	Protein Homology	CDS	79658	80848	.	-	0	ID=cds-WP_037571888.1;Parent=gene-RM588_RS03855;Dbxref=GenBank:WP_037571888.1;Name=WP_037571888.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728939.1;locus_tag=RM588_RS03855;product=glycosyltransferase family 4 protein;protein_id=WP_037571888.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	80870	81679	.	-	.	ID=gene-RM588_RS03860;Name=RM588_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03860;old_locus_tag=RM588_03860
NZ_JAVRJR010000002.1	Protein Homology	CDS	80870	81679	.	-	0	ID=cds-WP_037571891.1;Parent=gene-RM588_RS03860;Dbxref=GenBank:WP_037571891.1;Name=WP_037571891.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167469.1;locus_tag=RM588_RS03860;product=ABC transporter permease;protein_id=WP_037571891.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	81676	83541	.	-	.	ID=gene-RM588_RS03865;Name=RM588_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03865;old_locus_tag=RM588_03865
NZ_JAVRJR010000002.1	Protein Homology	CDS	81676	83541	.	-	0	ID=cds-WP_037571893.1;Parent=gene-RM588_RS03865;Dbxref=GenBank:WP_037571893.1;Name=WP_037571893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614303.1;locus_tag=RM588_RS03865;product=hypothetical protein;protein_id=WP_037571893.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	83556	86117	.	-	.	ID=gene-RM588_RS03870;Name=RM588_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03870;old_locus_tag=RM588_03870
NZ_JAVRJR010000002.1	Protein Homology	CDS	83556	86117	.	-	0	ID=cds-WP_103159699.1;Parent=gene-RM588_RS03870;Dbxref=GenBank:WP_103159699.1;Name=WP_103159699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728938.1;locus_tag=RM588_RS03870;product=glycosyltransferase;protein_id=WP_103159699.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	86119	87045	.	-	.	ID=gene-RM588_RS03875;Name=RM588_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03875;old_locus_tag=RM588_03875
NZ_JAVRJR010000002.1	Protein Homology	CDS	86119	87045	.	-	0	ID=cds-WP_037571900.1;Parent=gene-RM588_RS03875;Dbxref=GenBank:WP_037571900.1;Name=WP_037571900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728937.1;locus_tag=RM588_RS03875;product=hypothetical protein;protein_id=WP_037571900.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	87166	88428	.	-	.	ID=gene-RM588_RS03880;Name=RM588_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03880;old_locus_tag=RM588_03880
NZ_JAVRJR010000002.1	Protein Homology	CDS	87166	88428	.	-	0	ID=cds-WP_103159134.1;Parent=gene-RM588_RS03880;Dbxref=GenBank:WP_103159134.1;Name=WP_103159134.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498728.1;locus_tag=RM588_RS03880;product=nucleotide sugar dehydrogenase;protein_id=WP_103159134.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	88770	90383	.	-	.	ID=gene-RM588_RS03885;Name=RM588_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03885;old_locus_tag=RM588_03885
NZ_JAVRJR010000002.1	Protein Homology	CDS	88770	90383	.	-	0	ID=cds-WP_311542462.1;Parent=gene-RM588_RS03885;Dbxref=GenBank:WP_311542462.1;Name=WP_311542462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020049.7;locus_tag=RM588_RS03885;product=SH3 domain-containing protein;protein_id=WP_311542462.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	90760	91908	.	+	.	ID=gene-RM588_RS03890;Name=RM588_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03890;old_locus_tag=RM588_03890
NZ_JAVRJR010000002.1	Protein Homology	CDS	90760	91908	.	+	0	ID=cds-WP_311541310.1;Parent=gene-RM588_RS03890;Dbxref=GenBank:WP_311541310.1;Name=WP_311541310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167474.1;locus_tag=RM588_RS03890;product=SH3 domain-containing protein;protein_id=WP_311541310.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	91986	93638	.	-	.	ID=gene-RM588_RS03895;Name=RM588_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03895;old_locus_tag=RM588_03895
NZ_JAVRJR010000002.1	Protein Homology	CDS	91986	93638	.	-	0	ID=cds-WP_311541311.1;Parent=gene-RM588_RS03895;Dbxref=GenBank:WP_311541311.1;Name=WP_311541311.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728935.1;locus_tag=RM588_RS03895;product=phospho-sugar mutase;protein_id=WP_311541311.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	93990	95237	.	+	.	ID=gene-RM588_RS03900;Name=RM588_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03900;old_locus_tag=RM588_03900
NZ_JAVRJR010000002.1	Protein Homology	CDS	93990	95237	.	+	0	ID=cds-WP_037571906.1;Parent=gene-RM588_RS03900;Dbxref=GenBank:WP_037571906.1;Name=WP_037571906.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478388.1;locus_tag=RM588_RS03900;product=LCP family protein;protein_id=WP_037571906.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	95254	95724	.	+	.	ID=gene-RM588_RS03905;Name=RM588_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03905;old_locus_tag=RM588_03905
NZ_JAVRJR010000002.1	Protein Homology	CDS	95254	95724	.	+	0	ID=cds-WP_037571909.1;Parent=gene-RM588_RS03905;Dbxref=GenBank:WP_037571909.1;Name=WP_037571909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471869.1;locus_tag=RM588_RS03905;product=DUF2538 family protein;protein_id=WP_037571909.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	95857	96279	.	+	.	ID=gene-RM588_RS03910;Name=RM588_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03910;old_locus_tag=RM588_03910
NZ_JAVRJR010000002.1	Protein Homology	CDS	95857	96279	.	+	0	ID=cds-WP_037571912.1;Parent=gene-RM588_RS03910;Dbxref=GenBank:WP_037571912.1;Name=WP_037571912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018673135.1;locus_tag=RM588_RS03910;product=GNAT family N-acetyltransferase;protein_id=WP_037571912.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	96482	100576	.	+	.	ID=gene-RM588_RS03915;Name=RM588_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03915;old_locus_tag=RM588_03915
NZ_JAVRJR010000002.1	Protein Homology	CDS	96482	100576	.	+	0	ID=cds-WP_103159405.1;Parent=gene-RM588_RS03915;Dbxref=GenBank:WP_103159405.1;Name=WP_103159405.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167711.1;locus_tag=RM588_RS03915;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_103159405.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	100989	101996	.	+	.	ID=gene-RM588_RS03920;Name=RM588_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03920;old_locus_tag=RM588_03920
NZ_JAVRJR010000002.1	Protein Homology	CDS	100989	101996	.	+	0	ID=cds-WP_037571918.1;Parent=gene-RM588_RS03920;Dbxref=GenBank:WP_037571918.1;Name=WP_037571918.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165631.1;locus_tag=RM588_RS03920;product=acyltransferase family protein;protein_id=WP_037571918.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	102068	103234	.	+	.	ID=gene-RM588_RS03925;Name=RM588_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03925;old_locus_tag=RM588_03925
NZ_JAVRJR010000002.1	Protein Homology	CDS	102068	103234	.	+	0	ID=cds-WP_037571921.1;Parent=gene-RM588_RS03925;Dbxref=GenBank:WP_037571921.1;Name=WP_037571921.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508052.1;locus_tag=RM588_RS03925;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_037571921.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	103327	104145	.	-	.	ID=gene-RM588_RS03930;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=RM588_RS03930;old_locus_tag=RM588_03930
NZ_JAVRJR010000002.1	Protein Homology	CDS	103327	104145	.	-	0	ID=cds-WP_037571924.1;Parent=gene-RM588_RS03930;Dbxref=GenBank:WP_037571924.1;Name=WP_037571924.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=RM588_RS03930;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_037571924.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	104138	104953	.	-	.	ID=gene-RM588_RS03935;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=RM588_RS03935;old_locus_tag=RM588_03935
NZ_JAVRJR010000002.1	Protein Homology	CDS	104138	104953	.	-	0	ID=cds-WP_037571929.1;Parent=gene-RM588_RS03935;Dbxref=GenBank:WP_037571929.1;Name=WP_037571929.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471899.1;locus_tag=RM588_RS03935;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_037571929.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	104940	106613	.	-	.	ID=gene-RM588_RS03940;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=RM588_RS03940;old_locus_tag=RM588_03940
NZ_JAVRJR010000002.1	Protein Homology	CDS	104940	106613	.	-	0	ID=cds-WP_037571931.1;Parent=gene-RM588_RS03940;Dbxref=GenBank:WP_037571931.1;Name=WP_037571931.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833068.1;locus_tag=RM588_RS03940;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_037571931.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	106615	107967	.	-	.	ID=gene-RM588_RS03945;Name=RM588_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03945;old_locus_tag=RM588_03945
NZ_JAVRJR010000002.1	Protein Homology	CDS	106615	107967	.	-	0	ID=cds-WP_311541314.1;Parent=gene-RM588_RS03945;Dbxref=GenBank:WP_311541314.1;Name=WP_311541314.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614319.1;locus_tag=RM588_RS03945;product=isochorismate synthase;protein_id=WP_311541314.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	108142	109080	.	+	.	ID=gene-RM588_RS03950;Name=RM588_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03950;old_locus_tag=RM588_03950
NZ_JAVRJR010000002.1	Protein Homology	CDS	108142	109080	.	+	0	ID=cds-WP_037571937.1;Parent=gene-RM588_RS03950;Dbxref=GenBank:WP_037571937.1;Name=WP_037571937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614320.1;locus_tag=RM588_RS03950;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_037571937.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	109103	109879	.	-	.	ID=gene-RM588_RS03955;Name=RM588_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03955;old_locus_tag=RM588_03955
NZ_JAVRJR010000002.1	Protein Homology	CDS	109103	109879	.	-	0	ID=cds-WP_103159402.1;Parent=gene-RM588_RS03955;Dbxref=GenBank:WP_103159402.1;Name=WP_103159402.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167985.1;locus_tag=RM588_RS03955;product=ABC transporter permease;protein_id=WP_103159402.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	109876	110523	.	-	.	ID=gene-RM588_RS03960;Name=RM588_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03960;old_locus_tag=RM588_03960
NZ_JAVRJR010000002.1	Protein Homology	CDS	109876	110523	.	-	0	ID=cds-WP_103159401.1;Parent=gene-RM588_RS03960;Dbxref=GenBank:WP_103159401.1;Name=WP_103159401.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614322.1;locus_tag=RM588_RS03960;product=ABC transporter ATP-binding protein;protein_id=WP_103159401.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	110535	111092	.	-	.	ID=gene-RM588_RS03965;Name=RM588_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03965;old_locus_tag=RM588_03965
NZ_JAVRJR010000002.1	Protein Homology	CDS	110535	111092	.	-	0	ID=cds-WP_037571946.1;Parent=gene-RM588_RS03965;Dbxref=GenBank:WP_037571946.1;Name=WP_037571946.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165639.1;locus_tag=RM588_RS03965;product=GNAT family N-acetyltransferase;protein_id=WP_037571946.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	111533	111621	.	-	.	ID=gene-RM588_RS03970;Name=RM588_RS03970;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS03970;old_locus_tag=RM588_03970
NZ_JAVRJR010000002.1	tRNAscan-SE	tRNA	111533	111621	.	-	.	ID=rna-RM588_RS03970;Parent=gene-RM588_RS03970;anticodon=(pos:complement(111584..111586));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS03970;product=tRNA-Ser
NZ_JAVRJR010000002.1	tRNAscan-SE	exon	111533	111621	.	-	.	ID=exon-RM588_RS03970-1;Parent=rna-RM588_RS03970;anticodon=(pos:complement(111584..111586));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS03970;product=tRNA-Ser
NZ_JAVRJR010000002.1	RefSeq	gene	111625	111699	.	-	.	ID=gene-RM588_RS03975;Name=RM588_RS03975;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS03975;old_locus_tag=RM588_03975
NZ_JAVRJR010000002.1	tRNAscan-SE	tRNA	111625	111699	.	-	.	ID=rna-RM588_RS03975;Parent=gene-RM588_RS03975;anticodon=(pos:complement(111665..111667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS03975;product=tRNA-Asn
NZ_JAVRJR010000002.1	tRNAscan-SE	exon	111625	111699	.	-	.	ID=exon-RM588_RS03975-1;Parent=rna-RM588_RS03975;anticodon=(pos:complement(111665..111667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS03975;product=tRNA-Asn
NZ_JAVRJR010000002.1	RefSeq	pseudogene	111852	112127	.	-	.	ID=gene-RM588_RS03980;Name=RM588_RS03980;end_range=112127,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS03980;old_locus_tag=RM588_03980;partial=true;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	111852	112127	.	-	0	ID=cds-RM588_RS03980;Parent=gene-RM588_RS03980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=112127,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020438.7;locus_tag=RM588_RS03980;partial=true;product=YolD-like family protein;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	112332	113444	.	+	.	ID=gene-RM588_RS03985;Name=RM588_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03985;old_locus_tag=RM588_03985
NZ_JAVRJR010000002.1	Protein Homology	CDS	112332	113444	.	+	0	ID=cds-WP_000706213.1;Parent=gene-RM588_RS03985;Dbxref=GenBank:WP_000706213.1;Name=WP_000706213.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=RM588_RS03985;product=tyrosine-type recombinase/integrase;protein_id=WP_000706213.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	113447	115510	.	+	.	ID=gene-RM588_RS03990;Name=RM588_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03990;old_locus_tag=RM588_03990
NZ_JAVRJR010000002.1	Protein Homology	CDS	113447	115510	.	+	0	ID=cds-WP_000026850.1;Parent=gene-RM588_RS03990;Dbxref=GenBank:WP_000026850.1;Name=WP_000026850.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=RM588_RS03990;product=site-specific integrase;protein_id=WP_000026850.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	115519	115884	.	+	.	ID=gene-RM588_RS03995;Name=RM588_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS03995;old_locus_tag=RM588_03995
NZ_JAVRJR010000002.1	Protein Homology	CDS	115519	115884	.	+	0	ID=cds-WP_000410574.1;Parent=gene-RM588_RS03995;Dbxref=GenBank:WP_000410574.1;Name=WP_000410574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410574.1;locus_tag=RM588_RS03995;product=DUF6262 family protein;protein_id=WP_000410574.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	115889	117259	.	+	.	ID=gene-RM588_RS04000;Name=RM588_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04000;old_locus_tag=RM588_04000
NZ_JAVRJR010000002.1	Protein Homology	CDS	115889	117259	.	+	0	ID=cds-WP_000368919.1;Parent=gene-RM588_RS04000;Dbxref=GenBank:WP_000368919.1;Name=WP_000368919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=RM588_RS04000;product=hypothetical protein;protein_id=WP_000368919.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	117302	117712	.	-	.	ID=gene-RM588_RS04005;Name=RM588_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04005;old_locus_tag=RM588_04005
NZ_JAVRJR010000002.1	Protein Homology	CDS	117302	117712	.	-	0	ID=cds-WP_000612779.1;Parent=gene-RM588_RS04005;Dbxref=GenBank:WP_000612779.1;Name=WP_000612779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612779.1;locus_tag=RM588_RS04005;product=YolD-like family protein;protein_id=WP_000612779.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	118026	118871	.	-	.	ID=gene-RM588_RS04010;Name=blaZ;gbkey=Gene;gene=blaZ;gene_biotype=protein_coding;locus_tag=RM588_RS04010;old_locus_tag=RM588_04010
NZ_JAVRJR010000002.1	Protein Homology	CDS	118026	118871	.	-	0	ID=cds-WP_000733622.1;Parent=gene-RM588_RS04010;Dbxref=GenBank:WP_000733622.1;Name=WP_000733622.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaZ;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=RM588_RS04010;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;protein_id=WP_000733622.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	118978	120735	.	+	.	ID=gene-RM588_RS04015;Name=blaR1;gbkey=Gene;gene=blaR1;gene_biotype=protein_coding;locus_tag=RM588_RS04015;old_locus_tag=RM588_04015
NZ_JAVRJR010000002.1	Protein Homology	CDS	118978	120735	.	+	0	ID=cds-WP_001096367.1;Parent=gene-RM588_RS04015;Dbxref=GenBank:WP_001096367.1;Name=WP_001096367.1;gbkey=CDS;gene=blaR1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=RM588_RS04015;product=beta-lactam sensor/signal transducer BlaR1;protein_id=WP_001096367.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	120725	121105	.	+	.	ID=gene-RM588_RS04020;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=RM588_RS04020;old_locus_tag=RM588_04020
NZ_JAVRJR010000002.1	Protein Homology	CDS	120725	121105	.	+	0	ID=cds-WP_001284658.1;Parent=gene-RM588_RS04020;Dbxref=GenBank:WP_001284658.1;Name=WP_001284658.1;Ontology_term=GO:0045892;gbkey=CDS;gene=blaI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=RM588_RS04020;product=penicillinase repressor BlaI;protein_id=WP_001284658.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	121157	121312	.	-	.	ID=gene-RM588_RS04025;Name=RM588_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04025;old_locus_tag=RM588_04025
NZ_JAVRJR010000002.1	Protein Homology	CDS	121157	121312	.	-	0	ID=cds-WP_182474594.1;Parent=gene-RM588_RS04025;Dbxref=GenBank:WP_182474594.1;Name=WP_182474594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834627.1;locus_tag=RM588_RS04025;product=hypothetical protein;protein_id=WP_182474594.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	121471	121920	.	-	.	ID=gene-RM588_RS04030;Name=RM588_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04030;old_locus_tag=RM588_04030
NZ_JAVRJR010000002.1	Protein Homology	CDS	121471	121920	.	-	0	ID=cds-WP_103159400.1;Parent=gene-RM588_RS04030;Dbxref=GenBank:WP_103159400.1;Name=WP_103159400.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276697.1;locus_tag=RM588_RS04030;product=GNAT family N-acetyltransferase;protein_id=WP_103159400.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	122315	122953	.	-	.	ID=gene-RM588_RS04035;Name=RM588_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04035;old_locus_tag=RM588_04035
NZ_JAVRJR010000002.1	Protein Homology	CDS	122315	122953	.	-	0	ID=cds-WP_051604934.1;Parent=gene-RM588_RS04035;Dbxref=GenBank:WP_051604934.1;Name=WP_051604934.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424690.1;locus_tag=RM588_RS04035;product=competence protein ComK;protein_id=WP_051604934.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	123225	123407	.	+	.	ID=gene-RM588_RS04040;Name=RM588_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04040;old_locus_tag=RM588_04040
NZ_JAVRJR010000002.1	Protein Homology	CDS	123225	123407	.	+	0	ID=cds-WP_373368846.1;Parent=gene-RM588_RS04040;Dbxref=GenBank:WP_373368846.1;Name=WP_373368846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168467.1;locus_tag=RM588_RS04040;product=IDEAL domain-containing protein;protein_id=WP_373368846.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	123475	124467	.	-	.	ID=gene-RM588_RS04045;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=RM588_RS04045;old_locus_tag=RM588_04045
NZ_JAVRJR010000002.1	Protein Homology	CDS	123475	124467	.	-	0	ID=cds-WP_103159398.1;Parent=gene-RM588_RS04045;Dbxref=GenBank:WP_103159398.1;Name=WP_103159398.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165642.1;locus_tag=RM588_RS04045;product=lipoate--protein ligase;protein_id=WP_103159398.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	124642	124827	.	+	.	ID=gene-RM588_RS04050;Name=RM588_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04050;old_locus_tag=RM588_04050
NZ_JAVRJR010000002.1	Protein Homology	CDS	124642	124827	.	+	0	ID=cds-WP_037572105.1;Parent=gene-RM588_RS04050;Dbxref=GenBank:WP_037572105.1;Name=WP_037572105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=RM588_RS04050;product=YkvS family protein;protein_id=WP_037572105.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	124834	125436	.	+	.	ID=gene-RM588_RS04055;Name=RM588_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04055;old_locus_tag=RM588_04055
NZ_JAVRJR010000002.1	Protein Homology	CDS	124834	125436	.	+	0	ID=cds-WP_103159397.1;Parent=gene-RM588_RS04055;Dbxref=GenBank:WP_103159397.1;Name=WP_103159397.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=RM588_RS04055;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_103159397.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	125519	127024	.	-	.	ID=gene-RM588_RS04060;Name=RM588_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04060;old_locus_tag=RM588_04060
NZ_JAVRJR010000002.1	Protein Homology	CDS	125519	127024	.	-	0	ID=cds-WP_311541318.1;Parent=gene-RM588_RS04060;Dbxref=GenBank:WP_311541318.1;Name=WP_311541318.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424683.1;locus_tag=RM588_RS04060;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_311541318.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	127194	128552	.	-	.	ID=gene-RM588_RS04065;Name=RM588_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04065;old_locus_tag=RM588_04065
NZ_JAVRJR010000002.1	Protein Homology	CDS	127194	128552	.	-	0	ID=cds-WP_311542464.1;Parent=gene-RM588_RS04065;Dbxref=GenBank:WP_311542464.1;Name=WP_311542464.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459487.1;locus_tag=RM588_RS04065;product=TrkH family potassium uptake protein;protein_id=WP_311542464.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	128569	130182	.	-	.	ID=gene-RM588_RS04070;Name=RM588_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04070;old_locus_tag=RM588_04070
NZ_JAVRJR010000002.1	Protein Homology	CDS	128569	130182	.	-	0	ID=cds-WP_107366977.1;Parent=gene-RM588_RS04070;Dbxref=GenBank:WP_107366977.1;Name=WP_107366977.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614341.1;locus_tag=RM588_RS04070;product=S1C family serine protease;protein_id=WP_107366977.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	130334	131143	.	-	.	ID=gene-RM588_RS04075;Name=RM588_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04075;old_locus_tag=RM588_04075
NZ_JAVRJR010000002.1	Protein Homology	CDS	130334	131143	.	-	0	ID=cds-WP_165806227.1;Parent=gene-RM588_RS04075;Dbxref=GenBank:WP_165806227.1;Name=WP_165806227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499510.1;locus_tag=RM588_RS04075;product=MeeY/MeeF family manganese export membrane protein;protein_id=WP_165806227.1;transl_table=11
NZ_JAVRJR010000002.1	cmsearch	riboswitch	131220	131346	.	-	.	ID=id-NZ_JAVRJR010000002.1:131220..131346;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00080,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000002.1	RefSeq	gene	131424	132986	.	-	.	ID=gene-RM588_RS04080;Name=RM588_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04080;old_locus_tag=RM588_04080
NZ_JAVRJR010000002.1	Protein Homology	CDS	131424	132986	.	-	0	ID=cds-WP_037572120.1;Parent=gene-RM588_RS04080;Dbxref=GenBank:WP_037572120.1;Name=WP_037572120.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485407.1;locus_tag=RM588_RS04080;product=peptide chain release factor 3;protein_id=WP_037572120.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	132999	133238	.	-	.	ID=gene-RM588_RS04085;Name=RM588_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04085;old_locus_tag=RM588_04085
NZ_JAVRJR010000002.1	Protein Homology	CDS	132999	133238	.	-	0	ID=cds-WP_037572127.1;Parent=gene-RM588_RS04085;Dbxref=GenBank:WP_037572127.1;Name=WP_037572127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728912.1;locus_tag=RM588_RS04085;product=YueH family protein;protein_id=WP_037572127.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	133228	134712	.	-	.	ID=gene-RM588_RS04090;Name=RM588_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04090;old_locus_tag=RM588_04090
NZ_JAVRJR010000002.1	Protein Homology	CDS	133228	134712	.	-	0	ID=cds-WP_107366975.1;Parent=gene-RM588_RS04090;Dbxref=GenBank:WP_107366975.1;Name=WP_107366975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276211.1;locus_tag=RM588_RS04090;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_107366975.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	135238	136413	.	+	.	ID=gene-RM588_RS04095;Name=RM588_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04095;old_locus_tag=RM588_04095
NZ_JAVRJR010000002.1	Protein Homology	CDS	135238	136413	.	+	0	ID=cds-WP_103159394.1;Parent=gene-RM588_RS04095;Dbxref=GenBank:WP_103159394.1;Name=WP_103159394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303473.1;locus_tag=RM588_RS04095;product=diglucosyl diacylglycerol synthase;protein_id=WP_103159394.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	136391	137578	.	+	.	ID=gene-RM588_RS04100;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=RM588_RS04100;old_locus_tag=RM588_04100
NZ_JAVRJR010000002.1	Protein Homology	CDS	136391	137578	.	+	0	ID=cds-WP_169301482.1;Parent=gene-RM588_RS04100;Dbxref=GenBank:WP_169301482.1;Name=WP_169301482.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303474.1;locus_tag=RM588_RS04100;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_169301482.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	137908	138417	.	-	.	ID=gene-RM588_RS04105;Name=RM588_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04105;old_locus_tag=RM588_04105
NZ_JAVRJR010000002.1	Protein Homology	CDS	137908	138417	.	-	0	ID=cds-WP_107366973.1;Parent=gene-RM588_RS04105;Dbxref=GenBank:WP_107366973.1;Name=WP_107366973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494354.1;locus_tag=RM588_RS04105;product=2'-5' RNA ligase family protein;protein_id=WP_107366973.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	138468	139205	.	-	.	ID=gene-RM588_RS04110;Name=RM588_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04110;old_locus_tag=RM588_04110
NZ_JAVRJR010000002.1	Protein Homology	CDS	138468	139205	.	-	0	ID=cds-WP_037573034.1;Parent=gene-RM588_RS04110;Dbxref=GenBank:WP_037573034.1;Name=WP_037573034.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450759.1;locus_tag=RM588_RS04110;product=esterase family protein;protein_id=WP_037573034.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	139382	140962	.	-	.	ID=gene-RM588_RS04115;Name=RM588_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04115;old_locus_tag=RM588_04115
NZ_JAVRJR010000002.1	Protein Homology	CDS	139382	140962	.	-	0	ID=cds-WP_107366972.1;Parent=gene-RM588_RS04115;Dbxref=GenBank:WP_107366972.1;Name=WP_107366972.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899872.1;locus_tag=RM588_RS04115;product=alanine/glycine:cation symporter family protein;protein_id=WP_107366972.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	141162	142259	.	+	.	ID=gene-RM588_RS04120;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=RM588_RS04120;old_locus_tag=RM588_04120
NZ_JAVRJR010000002.1	Protein Homology	CDS	141162	142259	.	+	0	ID=cds-WP_037572143.1;Parent=gene-RM588_RS04120;Dbxref=GenBank:WP_037572143.1;Name=WP_037572143.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728893.1;locus_tag=RM588_RS04120;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_037572143.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	142407	143177	.	-	.	ID=gene-RM588_RS04125;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=RM588_RS04125;old_locus_tag=RM588_04125
NZ_JAVRJR010000002.1	Protein Homology	CDS	142407	143177	.	-	0	ID=cds-WP_103159392.1;Parent=gene-RM588_RS04125;Dbxref=GenBank:WP_103159392.1;Name=WP_103159392.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=RM588_RS04125;product=enoyl-ACP reductase FabI;protein_id=WP_103159392.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	143354	145189	.	-	.	ID=gene-RM588_RS04130;Name=RM588_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04130;old_locus_tag=RM588_04130
NZ_JAVRJR010000002.1	Protein Homology	CDS	143354	145189	.	-	0	ID=cds-WP_037572148.1;Parent=gene-RM588_RS04130;Dbxref=GenBank:WP_037572148.1;Name=WP_037572148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=RM588_RS04130;product=monovalent cation:proton antiporter family protein;protein_id=WP_037572148.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	145200	146543	.	-	.	ID=gene-RM588_RS04135;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=RM588_RS04135;old_locus_tag=RM588_04135
NZ_JAVRJR010000002.1	Protein Homology	CDS	145200	146543	.	-	0	ID=cds-WP_103159406.1;Parent=gene-RM588_RS04135;Dbxref=GenBank:WP_103159406.1;Name=WP_103159406.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383551.1;locus_tag=RM588_RS04135;product=magnesium transporter;protein_id=WP_103159406.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	146614	147468	.	-	.	ID=gene-RM588_RS04140;Name=RM588_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04140;old_locus_tag=RM588_04140
NZ_JAVRJR010000002.1	Protein Homology	CDS	146614	147468	.	-	0	ID=cds-WP_105962985.1;Parent=gene-RM588_RS04140;Dbxref=GenBank:WP_105962985.1;Name=WP_105962985.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167276.1;locus_tag=RM588_RS04140;product=RluA family pseudouridine synthase;protein_id=WP_105962985.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	147465	148274	.	-	.	ID=gene-RM588_RS04145;Name=RM588_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04145;old_locus_tag=RM588_04145
NZ_JAVRJR010000002.1	Protein Homology	CDS	147465	148274	.	-	0	ID=cds-WP_037572157.1;Parent=gene-RM588_RS04145;Dbxref=GenBank:WP_037572157.1;Name=WP_037572157.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167277.1;locus_tag=RM588_RS04145;product=NAD kinase;protein_id=WP_037572157.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	148274	148918	.	-	.	ID=gene-RM588_RS04150;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=RM588_RS04150;old_locus_tag=RM588_04150
NZ_JAVRJR010000002.1	Protein Homology	CDS	148274	148918	.	-	0	ID=cds-WP_037572160.1;Parent=gene-RM588_RS04150;Dbxref=GenBank:WP_037572160.1;Name=WP_037572160.1;Ontology_term=GO:0015970,GO:0005525,GO:0008728,GO:0016301,GO:0046872;gbkey=CDS;gene=yjbM;go_function=GTP binding|0005525||IEA,GTP diphosphokinase activity|0008728||IEA,kinase activity|0016301||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424659.1;locus_tag=RM588_RS04150;product=GTP diphosphokinase;protein_id=WP_037572160.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	148935	149282	.	-	.	ID=gene-RM588_RS04155;Name=RM588_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04155;old_locus_tag=RM588_04155
NZ_JAVRJR010000002.1	Protein Homology	CDS	148935	149282	.	-	0	ID=cds-WP_107370371.1;Parent=gene-RM588_RS04155;Dbxref=GenBank:WP_107370371.1;Name=WP_107370371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167279.1;locus_tag=RM588_RS04155;product=UPF0738 family protein;protein_id=WP_107370371.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	149484	150074	.	+	.	ID=gene-RM588_RS04160;Name=RM588_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04160;old_locus_tag=RM588_04160
NZ_JAVRJR010000002.1	Protein Homology	CDS	149484	150074	.	+	0	ID=cds-WP_107366969.1;Parent=gene-RM588_RS04160;Dbxref=GenBank:WP_107366969.1;Name=WP_107366969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637390.1;locus_tag=RM588_RS04160;product=CYTH domain-containing protein;protein_id=WP_107366969.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	150163	150534	.	+	.	ID=gene-RM588_RS04165;Name=RM588_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04165;old_locus_tag=RM588_04165
NZ_JAVRJR010000002.1	Protein Homology	CDS	150163	150534	.	+	0	ID=cds-WP_037572171.1;Parent=gene-RM588_RS04165;Dbxref=GenBank:WP_037572171.1;Name=WP_037572171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722302.1;locus_tag=RM588_RS04165;product=truncated hemoglobin YjbI;protein_id=WP_037572171.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	150549	151343	.	+	.	ID=gene-RM588_RS04170;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=RM588_RS04170;old_locus_tag=RM588_04170
NZ_JAVRJR010000002.1	Protein Homology	CDS	150549	151343	.	+	0	ID=cds-WP_037572173.1;Parent=gene-RM588_RS04170;Dbxref=GenBank:WP_037572173.1;Name=WP_037572173.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614367.1;locus_tag=RM588_RS04170;product=protease adaptor protein YjbH;protein_id=WP_037572173.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	151603	153411	.	-	.	ID=gene-RM588_RS04175;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM588_RS04175;old_locus_tag=RM588_04175
NZ_JAVRJR010000002.1	Protein Homology	CDS	151603	153411	.	-	0	ID=cds-WP_107366475.1;Parent=gene-RM588_RS04175;Dbxref=GenBank:WP_107366475.1;Name=WP_107366475.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499490.1;locus_tag=RM588_RS04175;product=oligoendopeptidase F;protein_id=WP_107366475.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	153482	154477	.	-	.	ID=gene-RM588_RS04180;Name=RM588_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04180;old_locus_tag=RM588_04180
NZ_JAVRJR010000002.1	Protein Homology	CDS	153482	154477	.	-	0	ID=cds-WP_133172365.1;Parent=gene-RM588_RS04180;Dbxref=GenBank:WP_133172365.1;Name=WP_133172365.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF017832.8;locus_tag=RM588_RS04180;product=competence protein CoiA;protein_id=WP_133172365.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	154676	155389	.	-	.	ID=gene-RM588_RS04185;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=RM588_RS04185;old_locus_tag=RM588_04185
NZ_JAVRJR010000002.1	Protein Homology	CDS	154676	155389	.	-	0	ID=cds-WP_037572185.1;Parent=gene-RM588_RS04185;Dbxref=GenBank:WP_037572185.1;Name=WP_037572185.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424650.1;locus_tag=RM588_RS04185;product=adaptor protein MecA;protein_id=WP_037572185.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	155615	156010	.	-	.	ID=gene-RM588_RS04190;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=RM588_RS04190;old_locus_tag=RM588_04190
NZ_JAVRJR010000002.1	Protein Homology	CDS	155615	156010	.	-	0	ID=cds-WP_037572189.1;Parent=gene-RM588_RS04190;Dbxref=GenBank:WP_037572189.1;Name=WP_037572189.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=RM588_RS04190;product=transcriptional regulator SpxA;protein_id=WP_037572189.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	156315	157307	.	+	.	ID=gene-RM588_RS04195;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=RM588_RS04195;old_locus_tag=RM588_04195
NZ_JAVRJR010000002.1	Protein Homology	CDS	156315	157307	.	+	0	ID=cds-WP_037572193.1;Parent=gene-RM588_RS04195;Dbxref=GenBank:WP_037572193.1;Name=WP_037572193.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424648.1;locus_tag=RM588_RS04195;product=tryptophan--tRNA ligase;protein_id=WP_037572193.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	157422	159047	.	-	.	ID=gene-RM588_RS04200;Name=RM588_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04200;old_locus_tag=RM588_04200
NZ_JAVRJR010000002.1	Protein Homology	CDS	157422	159047	.	-	0	ID=cds-WP_311541336.1;Parent=gene-RM588_RS04200;Dbxref=GenBank:WP_311541336.1;Name=WP_311541336.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728880.1;locus_tag=RM588_RS04200;product=peptide ABC transporter substrate-binding protein;protein_id=WP_311541336.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	159113	160051	.	-	.	ID=gene-RM588_RS04205;Name=RM588_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04205;old_locus_tag=RM588_04205
NZ_JAVRJR010000002.1	Protein Homology	CDS	159113	160051	.	-	0	ID=cds-WP_037572198.1;Parent=gene-RM588_RS04205;Dbxref=GenBank:WP_037572198.1;Name=WP_037572198.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459519.1;locus_tag=RM588_RS04205;product=ABC transporter ATP-binding protein;protein_id=WP_037572198.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	160051	161124	.	-	.	ID=gene-RM588_RS04210;Name=RM588_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04210;old_locus_tag=RM588_04210
NZ_JAVRJR010000002.1	Protein Homology	CDS	160051	161124	.	-	0	ID=cds-WP_037572201.1;Parent=gene-RM588_RS04210;Dbxref=GenBank:WP_037572201.1;Name=WP_037572201.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424645.1;locus_tag=RM588_RS04210;product=ABC transporter ATP-binding protein;protein_id=WP_037572201.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	161139	162200	.	-	.	ID=gene-RM588_RS04215;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=RM588_RS04215;old_locus_tag=RM588_04215
NZ_JAVRJR010000002.1	Protein Homology	CDS	161139	162200	.	-	0	ID=cds-WP_037572204.1;Parent=gene-RM588_RS04215;Dbxref=GenBank:WP_037572204.1;Name=WP_037572204.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220060.1;locus_tag=RM588_RS04215;product=oligopeptide ABC transporter permease;protein_id=WP_037572204.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	162200	163126	.	-	.	ID=gene-RM588_RS04220;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=RM588_RS04220;old_locus_tag=RM588_04220
NZ_JAVRJR010000002.1	Protein Homology	CDS	162200	163126	.	-	0	ID=cds-WP_105965169.1;Parent=gene-RM588_RS04220;Dbxref=GenBank:WP_105965169.1;Name=WP_105965169.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=RM588_RS04220;product=oligopeptide ABC transporter permease;protein_id=WP_105965169.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	163373	163753	.	+	.	ID=gene-RM588_RS04225;Name=RM588_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04225;old_locus_tag=RM588_04225
NZ_JAVRJR010000002.1	Protein Homology	CDS	163373	163753	.	+	0	ID=cds-WP_037572210.1;Parent=gene-RM588_RS04225;Dbxref=GenBank:WP_037572210.1;Name=WP_037572210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024438.7;locus_tag=RM588_RS04225;product=DUF3899 domain-containing protein;protein_id=WP_037572210.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	164074	165318	.	-	.	ID=gene-RM588_RS04230;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=RM588_RS04230;old_locus_tag=RM588_04230
NZ_JAVRJR010000002.1	Protein Homology	CDS	164074	165318	.	-	0	ID=cds-WP_105965168.1;Parent=gene-RM588_RS04230;Dbxref=GenBank:WP_105965168.1;Name=WP_105965168.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167295.1;locus_tag=RM588_RS04230;product=beta-ketoacyl-ACP synthase II;protein_id=WP_105965168.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	165335	166276	.	-	.	ID=gene-RM588_RS04235;Name=RM588_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04235;old_locus_tag=RM588_04235
NZ_JAVRJR010000002.1	Protein Homology	CDS	165335	166276	.	-	0	ID=cds-WP_105965167.1;Parent=gene-RM588_RS04235;Dbxref=GenBank:WP_105965167.1;Name=WP_105965167.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=RM588_RS04235;product=beta-ketoacyl-ACP synthase III;protein_id=WP_105965167.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	166427	166627	.	+	.	ID=gene-RM588_RS04240;Name=RM588_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04240;old_locus_tag=RM588_04240
NZ_JAVRJR010000002.1	Protein Homology	CDS	166427	166627	.	+	0	ID=cds-WP_037572217.1;Parent=gene-RM588_RS04240;Dbxref=GenBank:WP_037572217.1;Name=WP_037572217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165998.1;locus_tag=RM588_RS04240;product=DUF2929 family protein;protein_id=WP_037572217.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	166763	169372	.	-	.	ID=gene-RM588_RS04245;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=RM588_RS04245;old_locus_tag=RM588_04245
NZ_JAVRJR010000002.1	Protein Homology	CDS	166763	169372	.	-	0	ID=cds-WP_037572219.1;Parent=gene-RM588_RS04245;Dbxref=GenBank:WP_037572219.1;Name=WP_037572219.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167299.1;locus_tag=RM588_RS04245;product=ATP-dependent chaperone ClpB;protein_id=WP_037572219.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	169598	169906	.	-	.	ID=gene-RM588_RS04250;Name=RM588_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04250;old_locus_tag=RM588_04250
NZ_JAVRJR010000002.1	Protein Homology	CDS	169598	169906	.	-	0	ID=cds-WP_037572221.1;Parent=gene-RM588_RS04250;Dbxref=GenBank:WP_037572221.1;Name=WP_037572221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=RM588_RS04250;product=metal-sulfur cluster assembly factor;protein_id=WP_037572221.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	170019	170855	.	+	.	ID=gene-RM588_RS04255;Name=RM588_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04255;old_locus_tag=RM588_04255
NZ_JAVRJR010000002.1	Protein Homology	CDS	170019	170855	.	+	0	ID=cds-WP_311548081.1;Parent=gene-RM588_RS04255;Dbxref=GenBank:WP_311548081.1;Name=WP_311548081.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483780.1;locus_tag=RM588_RS04255;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_311548081.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	170858	172180	.	+	.	ID=gene-RM588_RS04260;Name=RM588_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04260;old_locus_tag=RM588_04260
NZ_JAVRJR010000002.1	Protein Homology	CDS	170858	172180	.	+	0	ID=cds-WP_105996721.1;Parent=gene-RM588_RS04260;Dbxref=GenBank:WP_105996721.1;Name=WP_105996721.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614391.1;locus_tag=RM588_RS04260;product=CoA-disulfide reductase;protein_id=WP_105996721.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	172327	172716	.	-	.	ID=gene-RM588_RS04265;Name=RM588_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04265;old_locus_tag=RM588_04265
NZ_JAVRJR010000002.1	Protein Homology	CDS	172327	172716	.	-	0	ID=cds-WP_037572226.1;Parent=gene-RM588_RS04265;Dbxref=GenBank:WP_037572226.1;Name=WP_037572226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614393.1;locus_tag=RM588_RS04265;product=YisL family protein;protein_id=WP_037572226.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	172969	173871	.	-	.	ID=gene-RM588_RS04270;Name=RM588_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04270;old_locus_tag=RM588_04270
NZ_JAVRJR010000002.1	Protein Homology	CDS	172969	173871	.	-	0	ID=cds-WP_037572227.1;Parent=gene-RM588_RS04270;Dbxref=GenBank:WP_037572227.1;Name=WP_037572227.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499459.1;locus_tag=RM588_RS04270;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_037572227.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	173950	177588	.	-	.	ID=gene-RM588_RS04275;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=RM588_RS04275;old_locus_tag=RM588_04275
NZ_JAVRJR010000002.1	Protein Homology	CDS	173950	177588	.	-	0	ID=cds-WP_311541320.1;Parent=gene-RM588_RS04275;Dbxref=GenBank:WP_311541320.1;Name=WP_311541320.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235847.1;locus_tag=RM588_RS04275;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_311541320.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	177575	181036	.	-	.	ID=gene-RM588_RS04280;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=RM588_RS04280;old_locus_tag=RM588_04280
NZ_JAVRJR010000002.1	Protein Homology	CDS	177575	181036	.	-	0	ID=cds-WP_037572232.1;Parent=gene-RM588_RS04280;Dbxref=GenBank:WP_037572232.1;Name=WP_037572232.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166007.1;locus_tag=RM588_RS04280;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_037572232.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	181336	181917	.	-	.	ID=gene-RM588_RS04285;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM588_RS04285;old_locus_tag=RM588_04285
NZ_JAVRJR010000002.1	Protein Homology	CDS	181336	181917	.	-	0	ID=cds-WP_037573035.1;Parent=gene-RM588_RS04285;Dbxref=GenBank:WP_037573035.1;Name=WP_037573035.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424628.1;locus_tag=RM588_RS04285;product=signal peptidase I;protein_id=WP_037573035.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	181929	182450	.	-	.	ID=gene-RM588_RS04290;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM588_RS04290;old_locus_tag=RM588_04290
NZ_JAVRJR010000002.1	Protein Homology	CDS	181929	182450	.	-	0	ID=cds-WP_037572234.1;Parent=gene-RM588_RS04290;Dbxref=GenBank:WP_037572234.1;Name=WP_037572234.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: protein motif:HMM:NF021981.7;locus_tag=RM588_RS04290;product=signal peptidase I;protein_id=WP_037572234.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	182594	183925	.	-	.	ID=gene-RM588_RS04295;Name=RM588_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04295;old_locus_tag=RM588_04295
NZ_JAVRJR010000002.1	Protein Homology	CDS	182594	183925	.	-	0	ID=cds-WP_037572236.1;Parent=gene-RM588_RS04295;Dbxref=GenBank:WP_037572236.1;Name=WP_037572236.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=RM588_RS04295;product=glucose-6-phosphate isomerase;protein_id=WP_037572236.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	184114	185319	.	+	.	ID=gene-RM588_RS04300;Name=RM588_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04300;old_locus_tag=RM588_04300
NZ_JAVRJR010000002.1	Protein Homology	CDS	184114	185319	.	+	0	ID=cds-WP_037572239.1;Parent=gene-RM588_RS04300;Dbxref=GenBank:WP_037572239.1;Name=WP_037572239.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637420.1;locus_tag=RM588_RS04300;product=argininosuccinate synthase;protein_id=WP_037572239.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	185312	186685	.	+	.	ID=gene-RM588_RS04305;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=RM588_RS04305;old_locus_tag=RM588_04305
NZ_JAVRJR010000002.1	Protein Homology	CDS	185312	186685	.	+	0	ID=cds-WP_103159382.1;Parent=gene-RM588_RS04305;Dbxref=GenBank:WP_103159382.1;Name=WP_103159382.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481867.1;locus_tag=RM588_RS04305;product=argininosuccinate lyase;protein_id=WP_103159382.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	186839	187774	.	+	.	ID=gene-RM588_RS04310;Name=RM588_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04310;old_locus_tag=RM588_04310
NZ_JAVRJR010000002.1	Protein Homology	CDS	186839	187774	.	+	0	ID=cds-WP_103158908.1;Parent=gene-RM588_RS04310;Dbxref=GenBank:WP_103158908.1;Name=WP_103158908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175845.1;locus_tag=RM588_RS04310;product=glycerophosphodiester phosphodiesterase;protein_id=WP_103158908.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	187827	189071	.	-	.	ID=gene-RM588_RS04315;Name=RM588_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04315;old_locus_tag=RM588_04315
NZ_JAVRJR010000002.1	Protein Homology	CDS	187827	189071	.	-	0	ID=cds-WP_103158907.1;Parent=gene-RM588_RS04315;Dbxref=GenBank:WP_103158907.1;Name=WP_103158907.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=RM588_RS04315;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_103158907.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	189232	190431	.	-	.	ID=gene-RM588_RS04320;Name=RM588_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04320;old_locus_tag=RM588_04320
NZ_JAVRJR010000002.1	Protein Homology	CDS	189232	190431	.	-	0	ID=cds-WP_103158906.1;Parent=gene-RM588_RS04320;Dbxref=GenBank:WP_103158906.1;Name=WP_103158906.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424621.1;locus_tag=RM588_RS04320;product=ornithine--oxo-acid transaminase;protein_id=WP_103158906.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	190655	192199	.	-	.	ID=gene-RM588_RS04325;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=RM588_RS04325;old_locus_tag=RM588_04325
NZ_JAVRJR010000002.1	Protein Homology	CDS	190655	192199	.	-	0	ID=cds-WP_037572253.1;Parent=gene-RM588_RS04325;Dbxref=GenBank:WP_037572253.1;Name=WP_037572253.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220054.1;locus_tag=RM588_RS04325;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_037572253.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	192531	192917	.	-	.	ID=gene-RM588_RS04330;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=RM588_RS04330;old_locus_tag=RM588_04330
NZ_JAVRJR010000002.1	Protein Homology	CDS	192531	192917	.	-	0	ID=cds-WP_037572258.1;Parent=gene-RM588_RS04330;Dbxref=GenBank:WP_037572258.1;Name=WP_037572258.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424619.1;locus_tag=RM588_RS04330;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_037572258.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	193083	193352	.	-	.	ID=gene-RM588_RS04335;Name=RM588_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04335;old_locus_tag=RM588_04335
NZ_JAVRJR010000002.1	Protein Homology	CDS	193083	193352	.	-	0	ID=cds-WP_037572261.1;Parent=gene-RM588_RS04335;Dbxref=GenBank:WP_037572261.1;Name=WP_037572261.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=RM588_RS04335;product=FmdB family zinc ribbon protein;protein_id=WP_037572261.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	193352	194542	.	-	.	ID=gene-RM588_RS04340;Name=fmdA;gbkey=Gene;gene=fmdA;gene_biotype=protein_coding;locus_tag=RM588_RS04340;old_locus_tag=RM588_04340
NZ_JAVRJR010000002.1	Protein Homology	CDS	193352	194542	.	-	0	ID=cds-WP_037572263.1;Parent=gene-RM588_RS04340;Dbxref=GenBank:WP_037572263.1;Name=WP_037572263.1;Ontology_term=GO:0004328;gbkey=CDS;gene=fmdA;go_function=formamidase activity|0004328||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383466.1;locus_tag=RM588_RS04340;product=formamidase;protein_id=WP_037572263.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	194953	195216	.	-	.	ID=gene-RM588_RS04345;Name=RM588_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04345;old_locus_tag=RM588_04345
NZ_JAVRJR010000002.1	Protein Homology	CDS	194953	195216	.	-	0	ID=cds-WP_037572266.1;Parent=gene-RM588_RS04345;Dbxref=GenBank:WP_037572266.1;Name=WP_037572266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728866.1;locus_tag=RM588_RS04345;product=DUF1871 family protein;protein_id=WP_037572266.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	195250	195855	.	-	.	ID=gene-RM588_RS04350;Name=RM588_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04350;old_locus_tag=RM588_04350
NZ_JAVRJR010000002.1	Protein Homology	CDS	195250	195855	.	-	0	ID=cds-WP_037572270.1;Parent=gene-RM588_RS04350;Dbxref=GenBank:WP_037572270.1;Name=WP_037572270.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276264.1;locus_tag=RM588_RS04350;product=peptidylprolyl isomerase;protein_id=WP_037572270.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	195928	196308	.	+	.	ID=gene-RM588_RS04355;Name=RM588_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04355;old_locus_tag=RM588_04355
NZ_JAVRJR010000002.1	Protein Homology	CDS	195928	196308	.	+	0	ID=cds-WP_037572273.1;Parent=gene-RM588_RS04355;Dbxref=GenBank:WP_037572273.1;Name=WP_037572273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831990.1;locus_tag=RM588_RS04355;product=kinase-associated lipoprotein B;protein_id=WP_037572273.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	196450	198867	.	+	.	ID=gene-RM588_RS04360;Name=RM588_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04360;old_locus_tag=RM588_04360
NZ_JAVRJR010000002.1	Protein Homology	CDS	196450	198867	.	+	0	ID=cds-WP_103158904.1;Parent=gene-RM588_RS04360;Dbxref=GenBank:WP_103158904.1;Name=WP_103158904.1;Ontology_term=GO:0055085,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614414.1;locus_tag=RM588_RS04360;product=Na+/H+ antiporter subunit A;protein_id=WP_103158904.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	198830	199276	.	+	.	ID=gene-RM588_RS04365;Name=RM588_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04365;old_locus_tag=RM588_04365
NZ_JAVRJR010000002.1	Protein Homology	CDS	198830	199276	.	+	0	ID=cds-WP_084275994.1;Parent=gene-RM588_RS04365;Dbxref=GenBank:WP_084275994.1;Name=WP_084275994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614415.1;locus_tag=RM588_RS04365;product=Na(+)/H(+) antiporter subunit B;protein_id=WP_084275994.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	199276	199623	.	+	.	ID=gene-RM588_RS04370;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=RM588_RS04370;old_locus_tag=RM588_04370
NZ_JAVRJR010000002.1	Protein Homology	CDS	199276	199623	.	+	0	ID=cds-WP_037572280.1;Parent=gene-RM588_RS04370;Dbxref=GenBank:WP_037572280.1;Name=WP_037572280.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614416.1;locus_tag=RM588_RS04370;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_037572280.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	199613	201112	.	+	.	ID=gene-RM588_RS04375;Name=RM588_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04375;old_locus_tag=RM588_04375
NZ_JAVRJR010000002.1	Protein Homology	CDS	199613	201112	.	+	0	ID=cds-WP_037572282.1;Parent=gene-RM588_RS04375;Dbxref=GenBank:WP_037572282.1;Name=WP_037572282.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722348.1;locus_tag=RM588_RS04375;product=Na+/H+ antiporter subunit D;protein_id=WP_037572282.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	201113	201595	.	+	.	ID=gene-RM588_RS04380;Name=RM588_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04380;old_locus_tag=RM588_04380
NZ_JAVRJR010000002.1	Protein Homology	CDS	201113	201595	.	+	0	ID=cds-WP_037572284.1;Parent=gene-RM588_RS04380;Dbxref=GenBank:WP_037572284.1;Name=WP_037572284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168293.1;locus_tag=RM588_RS04380;product=Na+/H+ antiporter subunit E;protein_id=WP_037572284.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	201592	201885	.	+	.	ID=gene-RM588_RS04385;Name=RM588_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04385;old_locus_tag=RM588_04385
NZ_JAVRJR010000002.1	Protein Homology	CDS	201592	201885	.	+	0	ID=cds-WP_037572285.1;Parent=gene-RM588_RS04385;Dbxref=GenBank:WP_037572285.1;Name=WP_037572285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614419.1;locus_tag=RM588_RS04385;product=Na(+)/H(+) antiporter subunit F1;protein_id=WP_037572285.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	201863	202219	.	+	.	ID=gene-RM588_RS04390;Name=RM588_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04390;old_locus_tag=RM588_04390
NZ_JAVRJR010000002.1	Protein Homology	CDS	201863	202219	.	+	0	ID=cds-WP_037572287.1;Parent=gene-RM588_RS04390;Dbxref=GenBank:WP_037572287.1;Name=WP_037572287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=RM588_RS04390;product=Na+/H+ antiporter subunit G1;protein_id=WP_037572287.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	202282	202656	.	-	.	ID=gene-RM588_RS04395;Name=RM588_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04395;old_locus_tag=RM588_04395
NZ_JAVRJR010000002.1	Protein Homology	CDS	202282	202656	.	-	0	ID=cds-WP_103158902.1;Parent=gene-RM588_RS04395;Dbxref=GenBank:WP_103158902.1;Name=WP_103158902.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467045.1;locus_tag=RM588_RS04395;product=PaaI family thioesterase;protein_id=WP_103158902.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	202678	203991	.	-	.	ID=gene-RM588_RS04400;Name=RM588_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04400;old_locus_tag=RM588_04400
NZ_JAVRJR010000002.1	Protein Homology	CDS	202678	203991	.	-	0	ID=cds-WP_105962979.1;Parent=gene-RM588_RS04400;Dbxref=GenBank:WP_105962979.1;Name=WP_105962979.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614422.1;locus_tag=RM588_RS04400;product=Na+/H+ antiporter family protein;protein_id=WP_105962979.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	204127	205605	.	-	.	ID=gene-RM588_RS04405;Name=RM588_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04405;old_locus_tag=RM588_04405
NZ_JAVRJR010000002.1	Protein Homology	CDS	204127	205605	.	-	0	ID=cds-WP_105996713.1;Parent=gene-RM588_RS04405;Dbxref=GenBank:WP_105996713.1;Name=WP_105996713.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383447.1;locus_tag=RM588_RS04405;product=M17 family metallopeptidase;protein_id=WP_105996713.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	205687	206889	.	-	.	ID=gene-RM588_RS04410;Name=RM588_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04410;old_locus_tag=RM588_04410
NZ_JAVRJR010000002.1	Protein Homology	CDS	205687	206889	.	-	0	ID=cds-WP_037572298.1;Parent=gene-RM588_RS04410;Dbxref=GenBank:WP_037572298.1;Name=WP_037572298.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166984.1;locus_tag=RM588_RS04410;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572298.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	207136	207495	.	-	.	ID=gene-RM588_RS04415;Name=RM588_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04415;old_locus_tag=RM588_04415
NZ_JAVRJR010000002.1	Protein Homology	CDS	207136	207495	.	-	0	ID=cds-WP_103158899.1;Parent=gene-RM588_RS04415;Dbxref=GenBank:WP_103158899.1;Name=WP_103158899.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=RM588_RS04415;product=HesB/IscA family protein;protein_id=WP_103158899.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	207509	207745	.	-	.	ID=gene-RM588_RS04420;Name=RM588_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04420;old_locus_tag=RM588_04420
NZ_JAVRJR010000002.1	Protein Homology	CDS	207509	207745	.	-	0	ID=cds-WP_103158898.1;Parent=gene-RM588_RS04420;Dbxref=GenBank:WP_103158898.1;Name=WP_103158898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499429.1;locus_tag=RM588_RS04420;product=YuzB family protein;protein_id=WP_103158898.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	208041	209105	.	+	.	ID=gene-RM588_RS04425;Name=RM588_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04425;old_locus_tag=RM588_04425
NZ_JAVRJR010000002.1	Protein Homology	CDS	208041	209105	.	+	0	ID=cds-WP_037572307.1;Parent=gene-RM588_RS04425;Dbxref=GenBank:WP_037572307.1;Name=WP_037572307.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794016.1;locus_tag=RM588_RS04425;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_037572307.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	209447	209767	.	-	.	ID=gene-RM588_RS04430;Name=RM588_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04430;old_locus_tag=RM588_04430
NZ_JAVRJR010000002.1	Protein Homology	CDS	209447	209767	.	-	0	ID=cds-WP_105962978.1;Parent=gene-RM588_RS04430;Dbxref=GenBank:WP_105962978.1;Name=WP_105962978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276281.1;locus_tag=RM588_RS04430;product=YuzD family protein;protein_id=WP_105962978.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	209872	210114	.	+	.	ID=gene-RM588_RS04435;Name=RM588_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04435;old_locus_tag=RM588_04435
NZ_JAVRJR010000002.1	Protein Homology	CDS	209872	210114	.	+	0	ID=cds-WP_037572314.1;Parent=gene-RM588_RS04435;Dbxref=GenBank:WP_037572314.1;Name=WP_037572314.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=RM588_RS04435;product=NifU family protein;protein_id=WP_037572314.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	210258	211406	.	-	.	ID=gene-RM588_RS04440;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=RM588_RS04440;old_locus_tag=RM588_04440
NZ_JAVRJR010000002.1	Protein Homology	CDS	210258	211406	.	-	0	ID=cds-WP_037572317.1;Parent=gene-RM588_RS04440;Dbxref=GenBank:WP_037572317.1;Name=WP_037572317.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424679.1;locus_tag=RM588_RS04440;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_037572317.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	211403	211639	.	-	.	ID=gene-RM588_RS04445;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=RM588_RS04445;old_locus_tag=RM588_04445
NZ_JAVRJR010000002.1	Protein Homology	CDS	211403	211639	.	-	0	ID=cds-WP_103158897.1;Parent=gene-RM588_RS04445;Dbxref=GenBank:WP_103158897.1;Name=WP_103158897.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=RM588_RS04445;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WP_103158897.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	211656	212876	.	-	.	ID=gene-RM588_RS04450;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=RM588_RS04450;old_locus_tag=RM588_04450
NZ_JAVRJR010000002.1	Protein Homology	CDS	211656	212876	.	-	0	ID=cds-WP_037572322.1;Parent=gene-RM588_RS04450;Dbxref=GenBank:WP_037572322.1;Name=WP_037572322.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613538.1;locus_tag=RM588_RS04450;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_037572322.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	212873	214327	.	-	.	ID=gene-RM588_RS04455;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=RM588_RS04455;old_locus_tag=RM588_04455
NZ_JAVRJR010000002.1	Protein Homology	CDS	212873	214327	.	-	0	ID=cds-WP_103158896.1;Parent=gene-RM588_RS04455;Dbxref=GenBank:WP_103158896.1;Name=WP_103158896.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129644.1;locus_tag=RM588_RS04455;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_103158896.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	214346	214477	.	-	.	ID=gene-RM588_RS04460;Name=RM588_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04460;old_locus_tag=RM588_04460
NZ_JAVRJR010000002.1	Protein Homology	CDS	214346	214477	.	-	0	ID=cds-WP_084275967.1;Parent=gene-RM588_RS04460;Dbxref=GenBank:WP_084275967.1;Name=WP_084275967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023875.6;locus_tag=RM588_RS04460;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_084275967.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	214973	215362	.	+	.	ID=gene-RM588_RS04465;Name=RM588_RS04465;end_range=215362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS04465;old_locus_tag=RM588_04465;partial=true;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	214973	215362	.	+	0	ID=cds-RM588_RS04465;Parent=gene-RM588_RS04465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=215362,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277741.1;locus_tag=RM588_RS04465;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	215417	215575	.	+	.	ID=gene-RM588_RS04470;Name=RM588_RS04470;end_range=215575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS04470;old_locus_tag=RM588_04470;partial=true;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	215417	215575	.	+	0	ID=cds-RM588_RS04470;Parent=gene-RM588_RS04470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=215575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM588_RS04470;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	215805	217463	.	-	.	ID=gene-RM588_RS04475;Name=RM588_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04475;old_locus_tag=RM588_04475
NZ_JAVRJR010000002.1	Protein Homology	CDS	215805	217463	.	-	0	ID=cds-WP_037572328.1;Parent=gene-RM588_RS04475;Dbxref=GenBank:WP_037572328.1;Name=WP_037572328.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275704.1;locus_tag=RM588_RS04475;product=glycoside hydrolase family 13 protein;protein_id=WP_037572328.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	217777	218772	.	+	.	ID=gene-RM588_RS04480;Name=RM588_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04480;old_locus_tag=RM588_04480
NZ_JAVRJR010000002.1	Protein Homology	CDS	217777	218772	.	+	0	ID=cds-WP_037572331.1;Parent=gene-RM588_RS04480;Dbxref=GenBank:WP_037572331.1;Name=WP_037572331.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004436347.1;locus_tag=RM588_RS04480;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_037572331.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	219031	220326	.	+	.	ID=gene-RM588_RS04485;Name=RM588_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04485;old_locus_tag=RM588_04485
NZ_JAVRJR010000002.1	Protein Homology	CDS	219031	220326	.	+	0	ID=cds-WP_232160109.1;Parent=gene-RM588_RS04485;Dbxref=GenBank:WP_232160109.1;Name=WP_232160109.1;Ontology_term=GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010632377.1;locus_tag=RM588_RS04485;product=SLC45 family MFS transporter;protein_id=WP_232160109.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	220405	220670	.	+	.	ID=gene-RM588_RS11300;Name=RM588_RS11300;end_range=220670,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11300;partial=true;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	220405	220670	.	+	0	ID=cds-RM588_RS11300;Parent=gene-RM588_RS11300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074;end_range=220670,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612187.1;locus_tag=RM588_RS11300;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	220729	221403	.	+	.	ID=gene-RM588_RS04490;Name=RM588_RS04490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS04490;old_locus_tag=RM588_04490;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	220729	221403	.	+	0	ID=cds-RM588_RS04490;Parent=gene-RM588_RS04490;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM588_RS04490;product=IS6 family transposase;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	221602	222597	.	+	.	ID=gene-RM588_RS04495;Name=RM588_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04495;old_locus_tag=RM588_04495
NZ_JAVRJR010000002.1	Protein Homology	CDS	221602	222597	.	+	0	ID=cds-WP_165806187.1;Parent=gene-RM588_RS04495;Dbxref=GenBank:WP_165806187.1;Name=WP_165806187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013752.7;locus_tag=RM588_RS04495;product=transposase;protein_id=WP_165806187.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	222766	223731	.	-	.	ID=gene-RM588_RS04500;Name=RM588_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04500;old_locus_tag=RM588_04500
NZ_JAVRJR010000002.1	Protein Homology	CDS	222766	223731	.	-	0	ID=cds-WP_037572337.1;Parent=gene-RM588_RS04500;Dbxref=GenBank:WP_037572337.1;Name=WP_037572337.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614430.1;locus_tag=RM588_RS04500;product=2-hydroxyacid dehydrogenase;protein_id=WP_037572337.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	223724	224521	.	-	.	ID=gene-RM588_RS04505;Name=nucF;gbkey=Gene;gene=nucF;gene_biotype=protein_coding;gene_synonym=yutF;locus_tag=RM588_RS04505;old_locus_tag=RM588_04505
NZ_JAVRJR010000002.1	Protein Homology	CDS	223724	224521	.	-	0	ID=cds-WP_037572340.1;Parent=gene-RM588_RS04505;Dbxref=GenBank:WP_037572340.1;Name=WP_037572340.1;Ontology_term=GO:0008253,GO:0016791,GO:0046872;gbkey=CDS;gene=nucF;go_function=5'-nucleotidase activity|0008253||IEA,phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424595.1;locus_tag=RM588_RS04505;product=5' nucleotidase NucF;protein_id=WP_037572340.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	224518	224955	.	-	.	ID=gene-RM588_RS04510;Name=RM588_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04510;old_locus_tag=RM588_04510
NZ_JAVRJR010000002.1	Protein Homology	CDS	224518	224955	.	-	0	ID=cds-WP_037572343.1;Parent=gene-RM588_RS04510;Dbxref=GenBank:WP_037572343.1;Name=WP_037572343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424594.1;locus_tag=RM588_RS04510;product=DUF86 domain-containing protein;protein_id=WP_037572343.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	225054	225320	.	+	.	ID=gene-RM588_RS04515;Name=RM588_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04515;old_locus_tag=RM588_04515
NZ_JAVRJR010000002.1	Protein Homology	CDS	225054	225320	.	+	0	ID=cds-WP_103158895.1;Parent=gene-RM588_RS04515;Dbxref=GenBank:WP_103158895.1;Name=WP_103158895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=RM588_RS04515;product=DUF3055 domain-containing protein;protein_id=WP_103158895.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	225453	226205	.	-	.	ID=gene-RM588_RS04520;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM588_RS04520;old_locus_tag=RM588_04520
NZ_JAVRJR010000002.1	Protein Homology	CDS	225453	226205	.	-	0	ID=cds-WP_157946078.1;Parent=gene-RM588_RS04520;Dbxref=GenBank:WP_157946078.1;Name=WP_157946078.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: protein motif:HMM:NF014186.8;locus_tag=RM588_RS04520;product=membrane protein insertase YidC;protein_id=WP_157946078.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	226451	226816	.	-	.	ID=gene-RM588_RS04525;Name=RM588_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04525;old_locus_tag=RM588_04525
NZ_JAVRJR010000002.1	Protein Homology	CDS	226451	226816	.	-	0	ID=cds-WP_037572349.1;Parent=gene-RM588_RS04525;Dbxref=GenBank:WP_037572349.1;Name=WP_037572349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424592.1;locus_tag=RM588_RS04525;product=YutD family protein;protein_id=WP_037572349.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	226834	227751	.	-	.	ID=gene-RM588_RS04530;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=RM588_RS04530;old_locus_tag=RM588_04530
NZ_JAVRJR010000002.1	Protein Homology	CDS	226834	227751	.	-	0	ID=cds-WP_037572352.1;Parent=gene-RM588_RS04530;Dbxref=GenBank:WP_037572352.1;Name=WP_037572352.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448197.1;locus_tag=RM588_RS04530;product=lipoyl synthase;protein_id=WP_037572352.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	227835	229154	.	-	.	ID=gene-RM588_RS04535;Name=RM588_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04535;old_locus_tag=RM588_04535
NZ_JAVRJR010000002.1	Protein Homology	CDS	227835	229154	.	-	0	ID=cds-WP_037572354.1;Parent=gene-RM588_RS04535;Dbxref=GenBank:WP_037572354.1;Name=WP_037572354.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424590.1;locus_tag=RM588_RS04535;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_037572354.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	229167	229991	.	-	.	ID=gene-RM588_RS04540;Name=RM588_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04540;old_locus_tag=RM588_04540
NZ_JAVRJR010000002.1	Protein Homology	CDS	229167	229991	.	-	0	ID=cds-WP_037572356.1;Parent=gene-RM588_RS04540;Dbxref=GenBank:WP_037572356.1;Name=WP_037572356.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469689.1;locus_tag=RM588_RS04540;product=sulfite exporter TauE/SafE family protein;protein_id=WP_037572356.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	230007	230855	.	-	.	ID=gene-RM588_RS04545;Name=RM588_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04545;old_locus_tag=RM588_04545
NZ_JAVRJR010000002.1	Protein Homology	CDS	230007	230855	.	-	0	ID=cds-WP_103158910.1;Parent=gene-RM588_RS04545;Dbxref=GenBank:WP_103158910.1;Name=WP_103158910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464385.1;locus_tag=RM588_RS04545;product=DUF72 domain-containing protein;protein_id=WP_103158910.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	230979	231674	.	+	.	ID=gene-RM588_RS04550;Name=RM588_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04550;old_locus_tag=RM588_04550
NZ_JAVRJR010000002.1	Protein Homology	CDS	230979	231674	.	+	0	ID=cds-WP_037572359.1;Parent=gene-RM588_RS04550;Dbxref=GenBank:WP_037572359.1;Name=WP_037572359.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480031.1;locus_tag=RM588_RS04550;product=alpha/beta hydrolase;protein_id=WP_037572359.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	231766	232843	.	-	.	ID=gene-RM588_RS04560;Name=RM588_RS04560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS04560;old_locus_tag=RM588_04560;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	231766	232843	.	-	0	ID=cds-RM588_RS04560;Parent=gene-RM588_RS04560;Note=frameshifted;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168757.1;locus_tag=RM588_RS04560;product=NAD(P)H-dependent flavin oxidoreductase;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	233408	234403	.	-	.	ID=gene-RM588_RS04565;Name=RM588_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04565;old_locus_tag=RM588_04565
NZ_JAVRJR010000002.1	Protein Homology	CDS	233408	234403	.	-	0	ID=cds-WP_037572362.1;Parent=gene-RM588_RS04565;Dbxref=GenBank:WP_037572362.1;Name=WP_037572362.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219506.1;locus_tag=RM588_RS04565;product=hemolysin family protein;protein_id=WP_037572362.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	234627	236024	.	-	.	ID=gene-RM588_RS04570;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=RM588_RS04570;old_locus_tag=RM588_04570
NZ_JAVRJR010000002.1	Protein Homology	CDS	234627	236024	.	-	0	ID=cds-WP_037572364.1;Parent=gene-RM588_RS04570;Dbxref=GenBank:WP_037572364.1;Name=WP_037572364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=RM588_RS04570;product=Fe-S cluster assembly protein SufB;protein_id=WP_037572364.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	236099	236548	.	-	.	ID=gene-RM588_RS04575;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=RM588_RS04575;old_locus_tag=RM588_04575
NZ_JAVRJR010000002.1	Protein Homology	CDS	236099	236548	.	-	0	ID=cds-WP_037572365.1;Parent=gene-RM588_RS04575;Dbxref=GenBank:WP_037572365.1;Name=WP_037572365.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614444.1;locus_tag=RM588_RS04575;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_037572365.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	236538	237779	.	-	.	ID=gene-RM588_RS04580;Name=RM588_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04580;old_locus_tag=RM588_04580
NZ_JAVRJR010000002.1	Protein Homology	CDS	236538	237779	.	-	0	ID=cds-WP_037573049.1;Parent=gene-RM588_RS04580;Dbxref=GenBank:WP_037573049.1;Name=WP_037573049.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424580.1;locus_tag=RM588_RS04580;product=cysteine desulfurase;protein_id=WP_037573049.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	237895	239202	.	-	.	ID=gene-RM588_RS04585;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=RM588_RS04585;old_locus_tag=RM588_04585
NZ_JAVRJR010000002.1	Protein Homology	CDS	237895	239202	.	-	0	ID=cds-WP_037572367.1;Parent=gene-RM588_RS04585;Dbxref=GenBank:WP_037572367.1;Name=WP_037572367.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=RM588_RS04585;product=Fe-S cluster assembly protein SufD;protein_id=WP_037572367.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	239224	239994	.	-	.	ID=gene-RM588_RS04590;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=RM588_RS04590;old_locus_tag=RM588_04590
NZ_JAVRJR010000002.1	Protein Homology	CDS	239224	239994	.	-	0	ID=cds-WP_037572369.1;Parent=gene-RM588_RS04590;Dbxref=GenBank:WP_037572369.1;Name=WP_037572369.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614447.1;locus_tag=RM588_RS04590;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_037572369.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	240298	241149	.	+	.	ID=gene-RM588_RS04595;Name=popT;gbkey=Gene;gene=popT;gene_biotype=protein_coding;locus_tag=RM588_RS04595;old_locus_tag=RM588_04595
NZ_JAVRJR010000002.1	Protein Homology	CDS	240298	241149	.	+	0	ID=cds-WP_037572371.1;Parent=gene-RM588_RS04595;Dbxref=GenBank:WP_037572371.1;Name=WP_037572371.1;Ontology_term=GO:0071555;gbkey=CDS;gene=popT;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424577.1;locus_tag=RM588_RS04595;product=polyprenyl-phosphate transporter PopT;protein_id=WP_037572371.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	241444	242274	.	-	.	ID=gene-RM588_RS04600;Name=RM588_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04600;old_locus_tag=RM588_04600
NZ_JAVRJR010000002.1	Protein Homology	CDS	241444	242274	.	-	0	ID=cds-WP_037572373.1;Parent=gene-RM588_RS04600;Dbxref=GenBank:WP_037572373.1;Name=WP_037572373.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614450.1;locus_tag=RM588_RS04600;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_037572373.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	242299	242994	.	-	.	ID=gene-RM588_RS04605;Name=RM588_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04605;old_locus_tag=RM588_04605
NZ_JAVRJR010000002.1	Protein Homology	CDS	242299	242994	.	-	0	ID=cds-WP_037572375.1;Parent=gene-RM588_RS04605;Dbxref=GenBank:WP_037572375.1;Name=WP_037572375.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=RM588_RS04605;product=methionine ABC transporter permease;protein_id=WP_037572375.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	242987	244015	.	-	.	ID=gene-RM588_RS04610;Name=RM588_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04610;old_locus_tag=RM588_04610
NZ_JAVRJR010000002.1	Protein Homology	CDS	242987	244015	.	-	0	ID=cds-WP_037572377.1;Parent=gene-RM588_RS04610;Dbxref=GenBank:WP_037572377.1;Name=WP_037572377.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082631.1;locus_tag=RM588_RS04610;product=methionine ABC transporter ATP-binding protein;protein_id=WP_037572377.1;transl_table=11
NZ_JAVRJR010000002.1	cmsearch	riboswitch	244108	244214	.	-	.	ID=id-NZ_JAVRJR010000002.1:244108..244214;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000002.1	RefSeq	gene	244254	244574	.	-	.	ID=gene-RM588_RS04615;Name=RM588_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04615;old_locus_tag=RM588_04615
NZ_JAVRJR010000002.1	Protein Homology	CDS	244254	244574	.	-	0	ID=cds-WP_037572379.1;Parent=gene-RM588_RS04615;Dbxref=GenBank:WP_037572379.1;Name=WP_037572379.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614454.1;locus_tag=RM588_RS04615;product=thioredoxin family protein;protein_id=WP_037572379.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	244540	244935	.	-	.	ID=gene-RM588_RS04620;Name=RM588_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04620;old_locus_tag=RM588_04620
NZ_JAVRJR010000002.1	Protein Homology	CDS	244540	244935	.	-	0	ID=cds-WP_037572380.1;Parent=gene-RM588_RS04620;Dbxref=GenBank:WP_037572380.1;Name=WP_037572380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614455.1;locus_tag=RM588_RS04620;product=toprim domain-containing protein;protein_id=WP_037572380.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	245018	245398	.	-	.	ID=gene-RM588_RS04625;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=RM588_RS04625;old_locus_tag=RM588_04625
NZ_JAVRJR010000002.1	Protein Homology	CDS	245018	245398	.	-	0	ID=cds-WP_037572381.1;Parent=gene-RM588_RS04625;Dbxref=GenBank:WP_037572381.1;Name=WP_037572381.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=RM588_RS04625;product=glycine cleavage system protein GcvH;protein_id=WP_037572381.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	245469	245822	.	-	.	ID=gene-RM588_RS04630;Name=RM588_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04630;old_locus_tag=RM588_04630
NZ_JAVRJR010000002.1	Protein Homology	CDS	245469	245822	.	-	0	ID=cds-WP_037572382.1;Parent=gene-RM588_RS04630;Dbxref=GenBank:WP_037572382.1;Name=WP_037572382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450858.1;locus_tag=RM588_RS04630;product=arsenate reductase family protein;protein_id=WP_037572382.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	245992	246312	.	+	.	ID=gene-RM588_RS04635;Name=RM588_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04635;old_locus_tag=RM588_04635
NZ_JAVRJR010000002.1	Protein Homology	CDS	245992	246312	.	+	0	ID=cds-WP_037572383.1;Parent=gene-RM588_RS04635;Dbxref=GenBank:WP_037572383.1;Name=WP_037572383.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147954.1;locus_tag=RM588_RS04635;product=thioredoxin family protein;protein_id=WP_037572383.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	246399	246944	.	-	.	ID=gene-RM588_RS04640;Name=RM588_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04640;old_locus_tag=RM588_04640
NZ_JAVRJR010000002.1	Protein Homology	CDS	246399	246944	.	-	0	ID=cds-WP_105985884.1;Parent=gene-RM588_RS04640;Dbxref=GenBank:WP_105985884.1;Name=WP_105985884.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424567.1;locus_tag=RM588_RS04640;product=nitroreductase family protein;protein_id=WP_105985884.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	246978	247721	.	-	.	ID=gene-RM588_RS04645;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=RM588_RS04645;old_locus_tag=RM588_04645
NZ_JAVRJR010000002.1	Protein Homology	CDS	246978	247721	.	-	0	ID=cds-WP_103158887.1;Parent=gene-RM588_RS04645;Dbxref=GenBank:WP_103158887.1;Name=WP_103158887.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166881.1;locus_tag=RM588_RS04645;product=type I 3-dehydroquinate dehydratase;protein_id=WP_103158887.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	247848	248267	.	+	.	ID=gene-RM588_RS04650;Name=RM588_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04650;old_locus_tag=RM588_04650
NZ_JAVRJR010000002.1	Protein Homology	CDS	247848	248267	.	+	0	ID=cds-WP_037572388.1;Parent=gene-RM588_RS04650;Dbxref=GenBank:WP_037572388.1;Name=WP_037572388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503427.1;locus_tag=RM588_RS04650;product=organic hydroperoxide resistance protein;protein_id=WP_037572388.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	248453	248956	.	+	.	ID=gene-RM588_RS04655;Name=RM588_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04655;old_locus_tag=RM588_04655
NZ_JAVRJR010000002.1	Protein Homology	CDS	248453	248956	.	+	0	ID=cds-WP_037572390.1;Parent=gene-RM588_RS04655;Dbxref=GenBank:WP_037572390.1;Name=WP_037572390.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424562.1;locus_tag=RM588_RS04655;product=GNAT family N-acetyltransferase;protein_id=WP_037572390.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	248965	249336	.	+	.	ID=gene-RM588_RS04660;Name=RM588_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04660;old_locus_tag=RM588_04660
NZ_JAVRJR010000002.1	Protein Homology	CDS	248965	249336	.	+	0	ID=cds-WP_107360756.1;Parent=gene-RM588_RS04660;Dbxref=GenBank:WP_107360756.1;Name=WP_107360756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166886.1;locus_tag=RM588_RS04660;product=DUF1722 domain-containing protein;protein_id=WP_107360756.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	249434	250906	.	+	.	ID=gene-RM588_RS04665;Name=RM588_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04665;old_locus_tag=RM588_04665
NZ_JAVRJR010000002.1	Protein Homology	CDS	249434	250906	.	+	0	ID=cds-WP_119512982.1;Parent=gene-RM588_RS04665;Dbxref=GenBank:WP_119512982.1;Name=WP_119512982.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364574.1;locus_tag=RM588_RS04665;product=MFS transporter;protein_id=WP_119512982.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	251032	251247	.	-	.	ID=gene-RM588_RS04670;Name=RM588_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04670;old_locus_tag=RM588_04670
NZ_JAVRJR010000002.1	Protein Homology	CDS	251032	251247	.	-	0	ID=cds-WP_037572397.1;Parent=gene-RM588_RS04670;Dbxref=GenBank:WP_037572397.1;Name=WP_037572397.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209103.1;locus_tag=RM588_RS04670;product=heavy-metal-associated domain-containing protein;protein_id=WP_037572397.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	251270	253180	.	-	.	ID=gene-RM588_RS04675;Name=RM588_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04675;old_locus_tag=RM588_04675
NZ_JAVRJR010000002.1	Protein Homology	CDS	251270	253180	.	-	0	ID=cds-WP_107370361.1;Parent=gene-RM588_RS04675;Dbxref=GenBank:WP_107370361.1;Name=WP_107370361.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479531.1;locus_tag=RM588_RS04675;product=heavy metal translocating P-type ATPase;protein_id=WP_107370361.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	253257	253913	.	-	.	ID=gene-RM588_RS04680;Name=RM588_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04680;old_locus_tag=RM588_04680
NZ_JAVRJR010000002.1	Protein Homology	CDS	253257	253913	.	-	0	ID=cds-WP_037572399.1;Parent=gene-RM588_RS04680;Dbxref=GenBank:WP_037572399.1;Name=WP_037572399.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656193.1;locus_tag=RM588_RS04680;product=Crp/Fnr family transcriptional regulator;protein_id=WP_037572399.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	254155	254337	.	-	.	ID=gene-RM588_RS04685;Name=RM588_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04685;old_locus_tag=RM588_04685
NZ_JAVRJR010000002.1	Protein Homology	CDS	254155	254337	.	-	0	ID=cds-WP_103158936.1;Parent=gene-RM588_RS04685;Dbxref=GenBank:WP_103158936.1;Name=WP_103158936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303570.1;locus_tag=RM588_RS04685;product=CsbD family protein;protein_id=WP_103158936.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	254451	255641	.	-	.	ID=gene-RM588_RS04690;Name=RM588_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04690;old_locus_tag=RM588_04690
NZ_JAVRJR010000002.1	Protein Homology	CDS	254451	255641	.	-	0	ID=cds-WP_311541322.1;Parent=gene-RM588_RS04690;Dbxref=GenBank:WP_311541322.1;Name=WP_311541322.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.7;locus_tag=RM588_RS04690;product=cation:proton antiporter;protein_id=WP_311541322.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	255904	256089	.	+	.	ID=gene-RM588_RS04695;Name=RM588_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04695;old_locus_tag=RM588_04695
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	255904	256089	.	+	0	ID=cds-WP_037572404.1;Parent=gene-RM588_RS04695;Dbxref=GenBank:WP_037572404.1;Name=WP_037572404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS04695;product=hypothetical protein;protein_id=WP_037572404.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	256621	257451	.	-	.	ID=gene-RM588_RS04700;Name=RM588_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04700;old_locus_tag=RM588_04700
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	256621	257451	.	-	0	ID=cds-WP_311548082.1;Parent=gene-RM588_RS04700;Dbxref=GenBank:WP_311548082.1;Name=WP_311548082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS04700;product=hypothetical protein;protein_id=WP_311548082.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	257851	258387	.	-	.	ID=gene-RM588_RS04705;Name=RM588_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04705;old_locus_tag=RM588_04705
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	257851	258387	.	-	0	ID=cds-WP_311541148.1;Parent=gene-RM588_RS04705;Dbxref=GenBank:WP_311541148.1;Name=WP_311541148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS04705;product=hypothetical protein;protein_id=WP_311541148.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	258412	259527	.	-	.	ID=gene-RM588_RS04710;Name=RM588_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04710;old_locus_tag=RM588_04710
NZ_JAVRJR010000002.1	Protein Homology	CDS	258412	259527	.	-	0	ID=cds-WP_311541149.1;Parent=gene-RM588_RS04710;Dbxref=GenBank:WP_311541149.1;Name=WP_311541149.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01554.3;locus_tag=RM588_RS04710;product=phage major capsid protein;protein_id=WP_311541149.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	259615	259956	.	-	.	ID=gene-RM588_RS04715;Name=RM588_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04715;old_locus_tag=RM588_04715
NZ_JAVRJR010000002.1	Protein Homology	CDS	259615	259956	.	-	0	ID=cds-WP_311541150.1;Parent=gene-RM588_RS04715;Dbxref=GenBank:WP_311541150.1;Name=WP_311541150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728774.1;locus_tag=RM588_RS04715;product=pathogenicity island protein;protein_id=WP_311541150.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	260224	261684	.	-	.	ID=gene-RM588_RS04720;Name=RM588_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04720;old_locus_tag=RM588_04720
NZ_JAVRJR010000002.1	Protein Homology	CDS	260224	261684	.	-	0	ID=cds-WP_311548083.1;Parent=gene-RM588_RS04720;Dbxref=GenBank:WP_311548083.1;Name=WP_311548083.1;Ontology_term=GO:0004386,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390454.1;locus_tag=RM588_RS04720;product=virulence-associated E family protein;protein_id=WP_311548083.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	261700	262587	.	-	.	ID=gene-RM588_RS04725;Name=RM588_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04725;old_locus_tag=RM588_04725
NZ_JAVRJR010000002.1	Protein Homology	CDS	261700	262587	.	-	0	ID=cds-WP_311541152.1;Parent=gene-RM588_RS04725;Dbxref=GenBank:WP_311541152.1;Name=WP_311541152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF057215.1;locus_tag=RM588_RS04725;product=primase alpha helix C-terminal domain-containing protein;protein_id=WP_311541152.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	262622	262927	.	-	.	ID=gene-RM588_RS04730;Name=tscT;gbkey=Gene;gene=tscT;gene_biotype=protein_coding;locus_tag=RM588_RS04730;old_locus_tag=RM588_04730
NZ_JAVRJR010000002.1	Protein Homology	CDS	262622	262927	.	-	0	ID=cds-WP_311541153.1;Parent=gene-RM588_RS04730;Dbxref=GenBank:WP_311541153.1;Name=WP_311541153.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;gene=tscT;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103945.1;locus_tag=RM588_RS04730;product=type II toxin-antitoxin system toxin TscT;protein_id=WP_311541153.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	262930	263136	.	-	.	ID=gene-RM588_RS04735;Name=tscA;gbkey=Gene;gene=tscA;gene_biotype=protein_coding;locus_tag=RM588_RS04735;old_locus_tag=RM588_04735
NZ_JAVRJR010000002.1	Protein Homology	CDS	262930	263136	.	-	0	ID=cds-WP_311541154.1;Parent=gene-RM588_RS04735;Dbxref=GenBank:WP_311541154.1;Name=WP_311541154.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tscA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728771.1;locus_tag=RM588_RS04735;product=type II toxin-antitoxin system antitoxin TscA;protein_id=WP_311541154.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	263138	263341	.	-	.	ID=gene-RM588_RS04740;Name=RM588_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04740;old_locus_tag=RM588_04740
NZ_JAVRJR010000002.1	Protein Homology	CDS	263138	263341	.	-	0	ID=cds-WP_311541155.1;Parent=gene-RM588_RS04740;Dbxref=GenBank:WP_311541155.1;Name=WP_311541155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231389.1;locus_tag=RM588_RS04740;product=pathogenicity island protein;protein_id=WP_311541155.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	263356	263574	.	-	.	ID=gene-RM588_RS04745;Name=RM588_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04745;old_locus_tag=RM588_04745
NZ_JAVRJR010000002.1	Protein Homology	CDS	263356	263574	.	-	0	ID=cds-WP_311548084.1;Parent=gene-RM588_RS04745;Dbxref=GenBank:WP_311548084.1;Name=WP_311548084.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728769.1;locus_tag=RM588_RS04745;product=helix-turn-helix transcriptional regulator;protein_id=WP_311548084.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	263571	263798	.	-	.	ID=gene-RM588_RS04750;Name=RM588_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04750;old_locus_tag=RM588_04750
NZ_JAVRJR010000002.1	Protein Homology	CDS	263571	263798	.	-	0	ID=cds-WP_311548085.1;Parent=gene-RM588_RS04750;Dbxref=GenBank:WP_311548085.1;Name=WP_311548085.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.7;locus_tag=RM588_RS04750;product=helix-turn-helix transcriptional regulator;protein_id=WP_311548085.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	263895	264497	.	+	.	ID=gene-RM588_RS04755;Name=RM588_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04755;old_locus_tag=RM588_04755
NZ_JAVRJR010000002.1	Protein Homology	CDS	263895	264497	.	+	0	ID=cds-WP_311548086.1;Parent=gene-RM588_RS04755;Dbxref=GenBank:WP_311548086.1;Name=WP_311548086.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006674932.1;locus_tag=RM588_RS04755;product=helix-turn-helix domain-containing protein;protein_id=WP_311548086.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	264487	265593	.	+	.	ID=gene-RM588_RS04760;Name=RM588_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04760;old_locus_tag=RM588_04760
NZ_JAVRJR010000002.1	Protein Homology	CDS	264487	265593	.	+	0	ID=cds-WP_311548087.1;Parent=gene-RM588_RS04760;Dbxref=GenBank:WP_311548087.1;Name=WP_311548087.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728767.1;locus_tag=RM588_RS04760;product=site-specific integrase;protein_id=WP_311548087.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	265702	266060	.	-	.	ID=gene-RM588_RS04765;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=RM588_RS04765;old_locus_tag=RM588_04765
NZ_JAVRJR010000002.1	cmsearch	tmRNA	265702	266060	.	-	.	ID=rna-RM588_RS04765;Parent=gene-RM588_RS04765;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS04765;product=transfer-messenger RNA
NZ_JAVRJR010000002.1	cmsearch	exon	265702	266060	.	-	.	ID=exon-RM588_RS04765-1;Parent=rna-RM588_RS04765;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS04765;product=transfer-messenger RNA
NZ_JAVRJR010000002.1	RefSeq	gene	266133	266597	.	-	.	ID=gene-RM588_RS04770;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=RM588_RS04770;old_locus_tag=RM588_04770
NZ_JAVRJR010000002.1	Protein Homology	CDS	266133	266597	.	-	0	ID=cds-WP_037572408.1;Parent=gene-RM588_RS04770;Dbxref=GenBank:WP_037572408.1;Name=WP_037572408.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=RM588_RS04770;product=SsrA-binding protein SmpB;protein_id=WP_037572408.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	266614	268968	.	-	.	ID=gene-RM588_RS04775;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=RM588_RS04775;old_locus_tag=RM588_04775
NZ_JAVRJR010000002.1	Protein Homology	CDS	266614	268968	.	-	0	ID=cds-WP_103158934.1;Parent=gene-RM588_RS04775;Dbxref=GenBank:WP_103158934.1;Name=WP_103158934.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=RM588_RS04775;product=ribonuclease R;protein_id=WP_103158934.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	269007	269747	.	-	.	ID=gene-RM588_RS04780;Name=RM588_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04780;old_locus_tag=RM588_04780
NZ_JAVRJR010000002.1	Protein Homology	CDS	269007	269747	.	-	0	ID=cds-WP_037572421.1;Parent=gene-RM588_RS04780;Dbxref=GenBank:WP_037572421.1;Name=WP_037572421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=RM588_RS04780;product=alpha/beta hydrolase;protein_id=WP_037572421.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	269901	270134	.	-	.	ID=gene-RM588_RS04785;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=RM588_RS04785;old_locus_tag=RM588_04785
NZ_JAVRJR010000002.1	Protein Homology	CDS	269901	270134	.	-	0	ID=cds-WP_037566707.1;Parent=gene-RM588_RS04785;Dbxref=GenBank:WP_037566707.1;Name=WP_037566707.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=RM588_RS04785;product=preprotein translocase subunit SecG;protein_id=WP_037566707.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	270204	270674	.	-	.	ID=gene-RM588_RS04790;Name=RM588_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04790;old_locus_tag=RM588_04790
NZ_JAVRJR010000002.1	Protein Homology	CDS	270204	270674	.	-	0	ID=cds-WP_229717270.1;Parent=gene-RM588_RS04790;Dbxref=GenBank:WP_229717270.1;Name=WP_229717270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168960.1;locus_tag=RM588_RS04790;product=hypothetical protein;protein_id=WP_229717270.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	270827	272131	.	-	.	ID=gene-RM588_RS04795;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=RM588_RS04795;old_locus_tag=RM588_04795
NZ_JAVRJR010000002.1	Protein Homology	CDS	270827	272131	.	-	0	ID=cds-WP_037572424.1;Parent=gene-RM588_RS04795;Dbxref=GenBank:WP_037572424.1;Name=WP_037572424.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=RM588_RS04795;product=surface-displayed alpha-enolase;protein_id=WP_037572424.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	272290	273810	.	-	.	ID=gene-RM588_RS04800;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=RM588_RS04800;old_locus_tag=RM588_04800
NZ_JAVRJR010000002.1	Protein Homology	CDS	272290	273810	.	-	0	ID=cds-WP_037572425.1;Parent=gene-RM588_RS04800;Dbxref=GenBank:WP_037572425.1;Name=WP_037572425.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=RM588_RS04800;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_037572425.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	273812	274573	.	-	.	ID=gene-RM588_RS04805;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=RM588_RS04805;old_locus_tag=RM588_04805
NZ_JAVRJR010000002.1	Protein Homology	CDS	273812	274573	.	-	0	ID=cds-WP_037572427.1;Parent=gene-RM588_RS04805;Dbxref=GenBank:WP_037572427.1;Name=WP_037572427.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=RM588_RS04805;product=triose-phosphate isomerase;protein_id=WP_037572427.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	274646	275836	.	-	.	ID=gene-RM588_RS04810;Name=RM588_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04810;old_locus_tag=RM588_04810
NZ_JAVRJR010000002.1	Protein Homology	CDS	274646	275836	.	-	0	ID=cds-WP_037572429.1;Parent=gene-RM588_RS04810;Dbxref=GenBank:WP_037572429.1;Name=WP_037572429.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=RM588_RS04810;product=phosphoglycerate kinase;protein_id=WP_037572429.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	276009	277016	.	-	.	ID=gene-RM588_RS04815;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=RM588_RS04815;old_locus_tag=RM588_04815
NZ_JAVRJR010000002.1	Protein Homology	CDS	276009	277016	.	-	0	ID=cds-WP_037572432.1;Parent=gene-RM588_RS04815;Dbxref=GenBank:WP_037572432.1;Name=WP_037572432.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=RM588_RS04815;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_037572432.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	277148	278164	.	-	.	ID=gene-RM588_RS04820;Name=RM588_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04820;old_locus_tag=RM588_04820
NZ_JAVRJR010000002.1	Protein Homology	CDS	277148	278164	.	-	0	ID=cds-WP_037572435.1;Parent=gene-RM588_RS04820;Dbxref=GenBank:WP_037572435.1;Name=WP_037572435.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424539.1;locus_tag=RM588_RS04820;product=sugar-binding transcriptional regulator;protein_id=WP_037572435.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	278456	278716	.	+	.	ID=gene-RM588_RS04825;Name=RM588_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04825;old_locus_tag=RM588_04825
NZ_JAVRJR010000002.1	Protein Homology	CDS	278456	278716	.	+	0	ID=cds-WP_037572438.1;Parent=gene-RM588_RS04825;Dbxref=GenBank:WP_037572438.1;Name=WP_037572438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424538.1;locus_tag=RM588_RS04825;product=hypothetical protein;protein_id=WP_037572438.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	278795	279499	.	-	.	ID=gene-RM588_RS04830;Name=RM588_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04830;old_locus_tag=RM588_04830
NZ_JAVRJR010000002.1	Protein Homology	CDS	278795	279499	.	-	0	ID=cds-WP_037572441.1;Parent=gene-RM588_RS04830;Dbxref=GenBank:WP_037572441.1;Name=WP_037572441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165687.1;locus_tag=RM588_RS04830;product=DUF4887 domain-containing protein;protein_id=WP_037572441.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	280075	280977	.	+	.	ID=gene-RM588_RS04835;Name=RM588_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04835;old_locus_tag=RM588_04835
NZ_JAVRJR010000002.1	Protein Homology	CDS	280075	280977	.	+	0	ID=cds-WP_037572444.1;Parent=gene-RM588_RS04835;Dbxref=GenBank:WP_037572444.1;Name=WP_037572444.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165689.1;locus_tag=RM588_RS04835;product=TIGR01777 family oxidoreductase;protein_id=WP_037572444.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	281122	281562	.	-	.	ID=gene-RM588_RS04840;Name=RM588_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04840;old_locus_tag=RM588_04840
NZ_JAVRJR010000002.1	Protein Homology	CDS	281122	281562	.	-	0	ID=cds-WP_051604937.1;Parent=gene-RM588_RS04840;Dbxref=GenBank:WP_051604937.1;Name=WP_051604937.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363264.1;locus_tag=RM588_RS04840;product=GNAT family N-acetyltransferase;protein_id=WP_051604937.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	281765	283270	.	+	.	ID=gene-RM588_RS04845;Name=RM588_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04845;old_locus_tag=RM588_04845
NZ_JAVRJR010000002.1	Protein Homology	CDS	281765	283270	.	+	0	ID=cds-WP_103158929.1;Parent=gene-RM588_RS04845;Dbxref=GenBank:WP_103158929.1;Name=WP_103158929.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912174.1;locus_tag=RM588_RS04845;product=M4 family metallopeptidase;protein_id=WP_103158929.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	283438	284220	.	-	.	ID=gene-RM588_RS04850;Name=RM588_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04850;old_locus_tag=RM588_04850
NZ_JAVRJR010000002.1	Protein Homology	CDS	283438	284220	.	-	0	ID=cds-WP_037572449.1;Parent=gene-RM588_RS04850;Dbxref=GenBank:WP_037572449.1;Name=WP_037572449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664081.1;locus_tag=RM588_RS04850;product=VOC family protein;protein_id=WP_037572449.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	284393	284596	.	+	.	ID=gene-RM588_RS04855;Name=RM588_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04855;old_locus_tag=RM588_04855
NZ_JAVRJR010000002.1	Protein Homology	CDS	284393	284596	.	+	0	ID=cds-WP_037572452.1;Parent=gene-RM588_RS04855;Dbxref=GenBank:WP_037572452.1;Name=WP_037572452.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=RM588_RS04855;product=TM2 domain-containing protein;protein_id=WP_037572452.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	284653	284853	.	-	.	ID=gene-RM588_RS04860;Name=RM588_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04860;old_locus_tag=RM588_04860
NZ_JAVRJR010000002.1	Protein Homology	CDS	284653	284853	.	-	0	ID=cds-WP_037572454.1;Parent=gene-RM588_RS04860;Dbxref=GenBank:WP_037572454.1;Name=WP_037572454.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=RM588_RS04860;product=cold shock domain-containing protein;protein_id=WP_037572454.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	285116	285877	.	-	.	ID=gene-RM588_RS04865;Name=RM588_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04865;old_locus_tag=RM588_04865
NZ_JAVRJR010000002.1	Protein Homology	CDS	285116	285877	.	-	0	ID=cds-WP_037572456.1;Parent=gene-RM588_RS04865;Dbxref=GenBank:WP_037572456.1;Name=WP_037572456.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479341.1;locus_tag=RM588_RS04865;product=peptidoglycan recognition protein family protein;protein_id=WP_037572456.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	286436	287017	.	+	.	ID=gene-RM588_RS04870;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=RM588_RS04870;old_locus_tag=RM588_04870
NZ_JAVRJR010000002.1	Protein Homology	CDS	286436	287017	.	+	0	ID=cds-WP_037572459.1;Parent=gene-RM588_RS04870;Dbxref=GenBank:WP_037572459.1;Name=WP_037572459.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424534.1;locus_tag=RM588_RS04870;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_037572459.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	287056	288000	.	-	.	ID=gene-RM588_RS04875;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=RM588_RS04875;old_locus_tag=RM588_04875
NZ_JAVRJR010000002.1	Protein Homology	CDS	287056	288000	.	-	0	ID=cds-WP_037572462.1;Parent=gene-RM588_RS04875;Dbxref=GenBank:WP_037572462.1;Name=WP_037572462.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=RM588_RS04875;product=DNA-binding protein WhiA;protein_id=WP_037572462.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	288059	289057	.	-	.	ID=gene-RM588_RS04880;Name=mgfK;gbkey=Gene;gene=mgfK;gene_biotype=protein_coding;gene_synonym=yvcK;locus_tag=RM588_RS04880;old_locus_tag=RM588_04880
NZ_JAVRJR010000002.1	Protein Homology	CDS	288059	289057	.	-	0	ID=cds-WP_037572464.1;Parent=gene-RM588_RS04880;Dbxref=GenBank:WP_037572464.1;Name=WP_037572464.1;Ontology_term=GO:0008360,GO:0043743;gbkey=CDS;gene=mgfK;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248937.1;locus_tag=RM588_RS04880;product=gluconeogenesis morphogenetic factor MgfK;protein_id=WP_037572464.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	289044	289967	.	-	.	ID=gene-RM588_RS04885;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=RM588_RS04885;old_locus_tag=RM588_04885
NZ_JAVRJR010000002.1	Protein Homology	CDS	289044	289967	.	-	0	ID=cds-WP_037572466.1;Parent=gene-RM588_RS04885;Dbxref=GenBank:WP_037572466.1;Name=WP_037572466.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303622.1;locus_tag=RM588_RS04885;product=RNase adapter RapZ;protein_id=WP_037572466.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	290131	291075	.	-	.	ID=gene-RM588_RS04890;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=RM588_RS04890;old_locus_tag=RM588_04890
NZ_JAVRJR010000002.1	Protein Homology	CDS	290131	291075	.	-	0	ID=cds-WP_037572468.1;Parent=gene-RM588_RS04890;Dbxref=GenBank:WP_037572468.1;Name=WP_037572468.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469483.1;locus_tag=RM588_RS04890;product=thioredoxin-disulfide reductase;protein_id=WP_037572468.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	291139	292575	.	-	.	ID=gene-RM588_RS04895;Name=RM588_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04895;old_locus_tag=RM588_04895
NZ_JAVRJR010000002.1	Protein Homology	CDS	291139	292575	.	-	0	ID=cds-WP_037572471.1;Parent=gene-RM588_RS04895;Dbxref=GenBank:WP_037572471.1;Name=WP_037572471.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728761.1;locus_tag=RM588_RS04895;product=tetratricopeptide repeat protein;protein_id=WP_037572471.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	292592	293077	.	-	.	ID=gene-RM588_RS04900;Name=RM588_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04900;old_locus_tag=RM588_04900
NZ_JAVRJR010000002.1	Protein Homology	CDS	292592	293077	.	-	0	ID=cds-WP_037572473.1;Parent=gene-RM588_RS04900;Dbxref=GenBank:WP_037572473.1;Name=WP_037572473.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424528.1;locus_tag=RM588_RS04900;product=acyltransferase;protein_id=WP_037572473.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	293061	293912	.	-	.	ID=gene-RM588_RS04905;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=RM588_RS04905;old_locus_tag=RM588_04905
NZ_JAVRJR010000002.1	Protein Homology	CDS	293061	293912	.	-	0	ID=cds-WP_037572475.1;Parent=gene-RM588_RS04905;Dbxref=GenBank:WP_037572475.1;Name=WP_037572475.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383062.1;locus_tag=RM588_RS04905;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_037572475.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	293915	294850	.	-	.	ID=gene-RM588_RS04910;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=RM588_RS04910;old_locus_tag=RM588_04910
NZ_JAVRJR010000002.1	Protein Homology	CDS	293915	294850	.	-	0	ID=cds-WP_037572477.1;Parent=gene-RM588_RS04910;Dbxref=GenBank:WP_037572477.1;Name=WP_037572477.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499338.1;locus_tag=RM588_RS04910;product=HPr(Ser) kinase/phosphatase;protein_id=WP_037572477.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	295024	295407	.	-	.	ID=gene-RM588_RS04915;Name=RM588_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04915;old_locus_tag=RM588_04915
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	295024	295407	.	-	0	ID=cds-WP_037572478.1;Parent=gene-RM588_RS04915;Dbxref=GenBank:WP_037572478.1;Name=WP_037572478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS04915;product=hypothetical protein;protein_id=WP_037572478.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	295411	298254	.	-	.	ID=gene-RM588_RS04920;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=RM588_RS04920;old_locus_tag=RM588_04920
NZ_JAVRJR010000002.1	Protein Homology	CDS	295411	298254	.	-	0	ID=cds-WP_037572481.1;Parent=gene-RM588_RS04920;Dbxref=GenBank:WP_037572481.1;Name=WP_037572481.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499337.1;locus_tag=RM588_RS04920;product=excinuclease ABC subunit UvrA;protein_id=WP_037572481.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	298260	300242	.	-	.	ID=gene-RM588_RS04925;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=RM588_RS04925;old_locus_tag=RM588_04925
NZ_JAVRJR010000002.1	Protein Homology	CDS	298260	300242	.	-	0	ID=cds-WP_037572484.1;Parent=gene-RM588_RS04925;Dbxref=GenBank:WP_037572484.1;Name=WP_037572484.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=RM588_RS04925;product=excinuclease ABC subunit UvrB;protein_id=WP_037572484.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	300397	300633	.	-	.	ID=gene-RM588_RS04930;Name=RM588_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04930;old_locus_tag=RM588_04930
NZ_JAVRJR010000002.1	Protein Homology	CDS	300397	300633	.	-	0	ID=cds-WP_037572486.1;Parent=gene-RM588_RS04930;Dbxref=GenBank:WP_037572486.1;Name=WP_037572486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614502.1;locus_tag=RM588_RS04930;product=CsbA family protein;protein_id=WP_037572486.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	300639	301280	.	-	.	ID=gene-RM588_RS04935;Name=RM588_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04935;old_locus_tag=RM588_04935
NZ_JAVRJR010000002.1	Protein Homology	CDS	300639	301280	.	-	0	ID=cds-WP_037572489.1;Parent=gene-RM588_RS04935;Dbxref=GenBank:WP_037572489.1;Name=WP_037572489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614503.1;locus_tag=RM588_RS04935;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_037572489.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	301409	302272	.	-	.	ID=gene-RM588_RS04940;Name=RM588_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04940;old_locus_tag=RM588_04940
NZ_JAVRJR010000002.1	Protein Homology	CDS	301409	302272	.	-	0	ID=cds-WP_051604938.1;Parent=gene-RM588_RS04940;Dbxref=GenBank:WP_051604938.1;Name=WP_051604938.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF017102.7;locus_tag=RM588_RS04940;product=CHAP domain-containing protein;protein_id=WP_051604938.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	302359	303463	.	-	.	ID=gene-RM588_RS04945;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=RM588_RS04945;old_locus_tag=RM588_04945
NZ_JAVRJR010000002.1	Protein Homology	CDS	303392	303463	.	-	0	ID=cds-WP_103158921.1;Parent=gene-RM588_RS04945;Dbxref=GenBank:WP_103158921.1;Name=WP_103158921.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM588_RS04945;product=peptide chain release factor 2;protein_id=WP_103158921.1;transl_table=11
NZ_JAVRJR010000002.1	Protein Homology	CDS	302359	303390	.	-	0	ID=cds-WP_103158921.1;Parent=gene-RM588_RS04945;Dbxref=GenBank:WP_103158921.1;Name=WP_103158921.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143084247.1;locus_tag=RM588_RS04945;product=peptide chain release factor 2;protein_id=WP_103158921.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	303487	306015	.	-	.	ID=gene-RM588_RS04950;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=RM588_RS04950;old_locus_tag=RM588_04950
NZ_JAVRJR010000002.1	Protein Homology	CDS	303487	306015	.	-	0	ID=cds-WP_037572491.1;Parent=gene-RM588_RS04950;Dbxref=GenBank:WP_037572491.1;Name=WP_037572491.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499326.1;locus_tag=RM588_RS04950;product=preprotein translocase subunit SecA;protein_id=WP_037572491.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	306236	306805	.	-	.	ID=gene-RM588_RS04955;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=RM588_RS04955;old_locus_tag=RM588_04955
NZ_JAVRJR010000002.1	Protein Homology	CDS	306236	306805	.	-	0	ID=cds-WP_037572494.1;Parent=gene-RM588_RS04955;Dbxref=GenBank:WP_037572494.1;Name=WP_037572494.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464843.1;locus_tag=RM588_RS04955;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_037572494.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	306870	307430	.	-	.	ID=gene-RM588_RS04960;Name=RM588_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04960;old_locus_tag=RM588_04960
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	306870	307430	.	-	0	ID=cds-WP_233650038.1;Parent=gene-RM588_RS04960;Dbxref=GenBank:WP_233650038.1;Name=WP_233650038.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS04960;product=ComF family protein;protein_id=WP_233650038.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	307526	308815	.	-	.	ID=gene-RM588_RS04965;Name=RM588_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04965;old_locus_tag=RM588_04965
NZ_JAVRJR010000002.1	Protein Homology	CDS	307526	308815	.	-	0	ID=cds-WP_105962959.1;Parent=gene-RM588_RS04965;Dbxref=GenBank:WP_105962959.1;Name=WP_105962959.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508280.1;locus_tag=RM588_RS04965;product=DEAD/DEAH box helicase family protein;protein_id=WP_105962959.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	308966	309838	.	-	.	ID=gene-RM588_RS04970;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=RM588_RS04970;old_locus_tag=RM588_04970
NZ_JAVRJR010000002.1	Protein Homology	CDS	308966	309838	.	-	0	ID=cds-WP_037572500.1;Parent=gene-RM588_RS04970;Dbxref=GenBank:WP_037572500.1;Name=WP_037572500.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168509.1;locus_tag=RM588_RS04970;product=fatty acid kinase binding subunit FakB1;protein_id=WP_037572500.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	310052	310690	.	+	.	ID=gene-RM588_RS04975;Name=RM588_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04975;old_locus_tag=RM588_04975
NZ_JAVRJR010000002.1	Protein Homology	CDS	310052	310690	.	+	0	ID=cds-WP_037572503.1;Parent=gene-RM588_RS04975;Dbxref=GenBank:WP_037572503.1;Name=WP_037572503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633769.1;locus_tag=RM588_RS04975;product=YigZ family protein;protein_id=WP_037572503.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	310739	311785	.	-	.	ID=gene-RM588_RS04980;Name=RM588_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04980;old_locus_tag=RM588_04980
NZ_JAVRJR010000002.1	Protein Homology	CDS	310739	311785	.	-	0	ID=cds-WP_037572505.1;Parent=gene-RM588_RS04980;Dbxref=GenBank:WP_037572505.1;Name=WP_037572505.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=obsolete glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483912.1;locus_tag=RM588_RS04980;product=glycosyltransferase family 4 protein;protein_id=WP_037572505.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	312007	313077	.	+	.	ID=gene-RM588_RS04985;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=RM588_RS04985;old_locus_tag=RM588_04985
NZ_JAVRJR010000002.1	Protein Homology	CDS	312007	313077	.	+	0	ID=cds-WP_105962958.1;Parent=gene-RM588_RS04985;Dbxref=GenBank:WP_105962958.1;Name=WP_105962958.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424511.1;locus_tag=RM588_RS04985;product=GGDEF domain-containing protein GdpS;protein_id=WP_105962958.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	313384	314145	.	+	.	ID=gene-RM588_RS04990;Name=RM588_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04990;old_locus_tag=RM588_04990
NZ_JAVRJR010000002.1	Protein Homology	CDS	313384	314145	.	+	0	ID=cds-WP_037572509.1;Parent=gene-RM588_RS04990;Dbxref=GenBank:WP_037572509.1;Name=WP_037572509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614513.1;locus_tag=RM588_RS04990;product=threonine/serine exporter family protein;protein_id=WP_037572509.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	314160	314663	.	+	.	ID=gene-RM588_RS04995;Name=RM588_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS04995;old_locus_tag=RM588_04995
NZ_JAVRJR010000002.1	Protein Homology	CDS	314160	314663	.	+	0	ID=cds-WP_103158917.1;Parent=gene-RM588_RS04995;Dbxref=GenBank:WP_103158917.1;Name=WP_103158917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614514.1;locus_tag=RM588_RS04995;product=threonine/serine exporter family protein;protein_id=WP_103158917.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	314676	315902	.	+	.	ID=gene-RM588_RS05000;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=RM588_RS05000;old_locus_tag=RM588_05000
NZ_JAVRJR010000002.1	Protein Homology	CDS	314676	315902	.	+	0	ID=cds-WP_311540624.1;Parent=gene-RM588_RS05000;Dbxref=GenBank:WP_311540624.1;Name=WP_311540624.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898336.1;locus_tag=RM588_RS05000;product=peptidase T;protein_id=WP_311540624.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	315953	317065	.	-	.	ID=gene-RM588_RS05005;Name=RM588_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05005;old_locus_tag=RM588_05005
NZ_JAVRJR010000002.1	Protein Homology	CDS	315953	317065	.	-	0	ID=cds-WP_311542470.1;Parent=gene-RM588_RS05005;Dbxref=GenBank:WP_311542470.1;Name=WP_311542470.1;Ontology_term=GO:0008152,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476428.1;locus_tag=RM588_RS05005;product=glycerate kinase;protein_id=WP_311542470.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	317185	317502	.	-	.	ID=gene-RM588_RS05010;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=RM588_RS05010;old_locus_tag=RM588_05010
NZ_JAVRJR010000002.1	Protein Homology	CDS	317185	317502	.	-	0	ID=cds-WP_037572519.1;Parent=gene-RM588_RS05010;Dbxref=GenBank:WP_037572519.1;Name=WP_037572519.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=RM588_RS05010;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_037572519.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	317647	318546	.	-	.	ID=gene-RM588_RS05015;Name=RM588_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05015;old_locus_tag=RM588_05015
NZ_JAVRJR010000002.1	Protein Homology	CDS	317647	318546	.	-	0	ID=cds-WP_311540626.1;Parent=gene-RM588_RS05015;Dbxref=GenBank:WP_311540626.1;Name=WP_311540626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033194.1;locus_tag=RM588_RS05015;product=EMYY motif lipoprotein;protein_id=WP_311540626.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	318646	319164	.	+	.	ID=gene-RM588_RS05020;Name=RM588_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05020;old_locus_tag=RM588_05020
NZ_JAVRJR010000002.1	Protein Homology	CDS	318646	319164	.	+	0	ID=cds-WP_037572525.1;Parent=gene-RM588_RS05020;Dbxref=GenBank:WP_037572525.1;Name=WP_037572525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383087.1;locus_tag=RM588_RS05020;product=GrpB family protein;protein_id=WP_037572525.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	319237	320163	.	+	.	ID=gene-RM588_RS05025;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=RM588_RS05025;old_locus_tag=RM588_05025
NZ_JAVRJR010000002.1	Protein Homology	CDS	319237	320163	.	+	0	ID=cds-WP_165806198.1;Parent=gene-RM588_RS05025;Dbxref=GenBank:WP_165806198.1;Name=WP_165806198.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471788.1;locus_tag=RM588_RS05025;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_165806198.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	320179	320493	.	+	.	ID=gene-RM588_RS05030;Name=RM588_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05030;old_locus_tag=RM588_05030
NZ_JAVRJR010000002.1	Protein Homology	CDS	320179	320493	.	+	0	ID=cds-WP_037572530.1;Parent=gene-RM588_RS05030;Dbxref=GenBank:WP_037572530.1;Name=WP_037572530.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484624.1;locus_tag=RM588_RS05030;product=CHY zinc finger protein;protein_id=WP_037572530.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	321051	322022	.	-	.	ID=gene-RM588_RS05035;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=RM588_RS05035;old_locus_tag=RM588_05035
NZ_JAVRJR010000002.1	Protein Homology	CDS	321051	322022	.	-	0	ID=cds-WP_037572532.1;Parent=gene-RM588_RS05035;Dbxref=GenBank:WP_037572532.1;Name=WP_037572532.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499303.1;locus_tag=RM588_RS05035;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_037572532.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	322270	324375	.	-	.	ID=gene-RM588_RS05040;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=RM588_RS05040;old_locus_tag=RM588_05040
NZ_JAVRJR010000002.1	Protein Homology	CDS	322270	324375	.	-	0	ID=cds-WP_105962954.1;Parent=gene-RM588_RS05040;Dbxref=GenBank:WP_105962954.1;Name=WP_105962954.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=RM588_RS05040;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_105962954.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	324347	324736	.	-	.	ID=gene-RM588_RS05045;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=RM588_RS05045;old_locus_tag=RM588_05045
NZ_JAVRJR010000002.1	Protein Homology	CDS	324347	324736	.	-	0	ID=cds-WP_037572538.1;Parent=gene-RM588_RS05045;Dbxref=GenBank:WP_037572538.1;Name=WP_037572538.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=RM588_RS05045;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_037572538.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	325419	326291	.	+	.	ID=gene-RM588_RS05050;Name=RM588_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05050;old_locus_tag=RM588_05050
NZ_JAVRJR010000002.1	Protein Homology	CDS	325419	326291	.	+	0	ID=cds-WP_037572541.1;Parent=gene-RM588_RS05050;Dbxref=GenBank:WP_037572541.1;Name=WP_037572541.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276426.1;locus_tag=RM588_RS05050;product=DMT family transporter;protein_id=WP_037572541.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	326314	326814	.	+	.	ID=gene-RM588_RS05055;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=RM588_RS05055;old_locus_tag=RM588_05055
NZ_JAVRJR010000002.1	Protein Homology	CDS	326314	326814	.	+	0	ID=cds-WP_037572545.1;Parent=gene-RM588_RS05055;Dbxref=GenBank:WP_037572545.1;Name=WP_037572545.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479355.1;locus_tag=RM588_RS05055;product=preQ(1) synthase;protein_id=WP_037572545.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	326991	328502	.	+	.	ID=gene-RM588_RS05060;Name=RM588_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05060;old_locus_tag=RM588_05060
NZ_JAVRJR010000002.1	Protein Homology	CDS	326991	328502	.	+	0	ID=cds-WP_105962953.1;Parent=gene-RM588_RS05060;Dbxref=GenBank:WP_105962953.1;Name=WP_105962953.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168527.1;locus_tag=RM588_RS05060;product=peptide MFS transporter;protein_id=WP_105962953.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	328741	329667	.	+	.	ID=gene-RM588_RS05065;Name=RM588_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05065;old_locus_tag=RM588_05065
NZ_JAVRJR010000002.1	Protein Homology	CDS	328741	329667	.	+	0	ID=cds-WP_037572549.1;Parent=gene-RM588_RS05065;Dbxref=GenBank:WP_037572549.1;Name=WP_037572549.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166140.1;locus_tag=RM588_RS05065;product=diacylglycerol/lipid kinase family protein;protein_id=WP_037572549.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	329729	329838	.	-	.	ID=gene-RM588_RS11305;Name=RM588_RS11305;end_range=329838,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11305;partial=true;pseudo=true
NZ_JAVRJR010000002.1	Protein Homology	CDS	329729	329838	.	-	0	ID=cds-RM588_RS11305;Parent=gene-RM588_RS11305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=329838,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558179.1;locus_tag=RM588_RS11305;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	330624	331151	.	-	.	ID=gene-RM588_RS05075;Name=RM588_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05075;old_locus_tag=RM588_05075
NZ_JAVRJR010000002.1	Protein Homology	CDS	330624	331151	.	-	0	ID=cds-WP_037572553.1;Parent=gene-RM588_RS05075;Dbxref=GenBank:WP_037572553.1;Name=WP_037572553.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424492.1;locus_tag=RM588_RS05075;product=5' nucleotidase%2C NT5C type;protein_id=WP_037572553.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	331222	332271	.	-	.	ID=gene-RM588_RS05080;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=RM588_RS05080;old_locus_tag=RM588_05080
NZ_JAVRJR010000002.1	Protein Homology	CDS	331222	332271	.	-	0	ID=cds-WP_037572555.1;Parent=gene-RM588_RS05080;Dbxref=GenBank:WP_037572555.1;Name=WP_037572555.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168531.1;locus_tag=RM588_RS05080;product=histidinol-phosphate transaminase;protein_id=WP_037572555.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	332454	333968	.	-	.	ID=gene-RM588_RS05085;Name=RM588_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05085;old_locus_tag=RM588_05085
NZ_JAVRJR010000002.1	Protein Homology	CDS	332454	333968	.	-	0	ID=cds-WP_103159359.1;Parent=gene-RM588_RS05085;Dbxref=GenBank:WP_103159359.1;Name=WP_103159359.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441471.1;locus_tag=RM588_RS05085;product=ABC transporter permease/substrate-binding protein;protein_id=WP_103159359.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	333965	334918	.	-	.	ID=gene-RM588_RS05090;Name=RM588_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05090;old_locus_tag=RM588_05090
NZ_JAVRJR010000002.1	Protein Homology	CDS	333965	334918	.	-	0	ID=cds-WP_037572561.1;Parent=gene-RM588_RS05090;Dbxref=GenBank:WP_037572561.1;Name=WP_037572561.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424489.1;locus_tag=RM588_RS05090;product=ABC transporter ATP-binding protein;protein_id=WP_037572561.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	335141	336919	.	-	.	ID=gene-RM588_RS05095;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=RM588_RS05095;old_locus_tag=RM588_05095
NZ_JAVRJR010000002.1	Protein Homology	CDS	335141	336919	.	-	0	ID=cds-WP_037572564.1;Parent=gene-RM588_RS05095;Dbxref=GenBank:WP_037572564.1;Name=WP_037572564.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424488.1;locus_tag=RM588_RS05095;product=DNA helicase RecQ;protein_id=WP_037572564.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	336930	338807	.	-	.	ID=gene-RM588_RS05100;Name=RM588_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05100;old_locus_tag=RM588_05100
NZ_JAVRJR010000002.1	Protein Homology	CDS	336930	338807	.	-	0	ID=cds-WP_037572566.1;Parent=gene-RM588_RS05100;Dbxref=GenBank:WP_037572566.1;Name=WP_037572566.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166146.1;locus_tag=RM588_RS05100;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_037572566.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	338920	339735	.	+	.	ID=gene-RM588_RS05105;Name=RM588_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05105;old_locus_tag=RM588_05105
NZ_JAVRJR010000002.1	Protein Homology	CDS	338920	339735	.	+	0	ID=cds-WP_037572569.1;Parent=gene-RM588_RS05105;Dbxref=GenBank:WP_037572569.1;Name=WP_037572569.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276437.1;locus_tag=RM588_RS05105;product=ZIP family metal transporter;protein_id=WP_037572569.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	339890	341827	.	-	.	ID=gene-RM588_RS05110;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=RM588_RS05110;old_locus_tag=RM588_05110
NZ_JAVRJR010000002.1	Protein Homology	CDS	339890	341827	.	-	0	ID=cds-WP_037572572.1;Parent=gene-RM588_RS05110;Dbxref=GenBank:WP_037572572.1;Name=WP_037572572.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166148.1;locus_tag=RM588_RS05110;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_037572572.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	342346	343350	.	-	.	ID=gene-RM588_RS05115;Name=RM588_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05115;old_locus_tag=RM588_05115
NZ_JAVRJR010000002.1	Protein Homology	CDS	342346	343350	.	-	0	ID=cds-WP_037572575.1;Parent=gene-RM588_RS05115;Dbxref=GenBank:WP_037572575.1;Name=WP_037572575.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022331.1;locus_tag=RM588_RS05115;product=5-oxoprolinase subunit C family protein;protein_id=WP_037572575.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	343347	344030	.	-	.	ID=gene-RM588_RS05120;Name=RM588_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05120;old_locus_tag=RM588_05120
NZ_JAVRJR010000002.1	Protein Homology	CDS	343347	344030	.	-	0	ID=cds-WP_037572578.1;Parent=gene-RM588_RS05120;Dbxref=GenBank:WP_037572578.1;Name=WP_037572578.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452712.1;locus_tag=RM588_RS05120;product=5-oxoprolinase subunit B family protein;protein_id=WP_037572578.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	344263	344871	.	-	.	ID=gene-RM588_RS05125;Name=RM588_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05125;old_locus_tag=RM588_05125
NZ_JAVRJR010000002.1	Protein Homology	CDS	344263	344871	.	-	0	ID=cds-WP_037572584.1;Parent=gene-RM588_RS05125;Dbxref=GenBank:WP_037572584.1;Name=WP_037572584.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013247.7;locus_tag=RM588_RS05125;product=aminotransferase class IV;protein_id=WP_037572584.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	344875	346011	.	-	.	ID=gene-RM588_RS05130;Name=RM588_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05130;old_locus_tag=RM588_05130
NZ_JAVRJR010000002.1	Protein Homology	CDS	344875	346011	.	-	0	ID=cds-WP_037572587.1;Parent=gene-RM588_RS05130;Dbxref=GenBank:WP_037572587.1;Name=WP_037572587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614546.1;locus_tag=RM588_RS05130;product=anthranilate synthase component I family protein;protein_id=WP_037572587.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	345995	346588	.	-	.	ID=gene-RM588_RS05135;Name=RM588_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05135;old_locus_tag=RM588_05135
NZ_JAVRJR010000002.1	Protein Homology	CDS	345995	346588	.	-	0	ID=cds-WP_037572590.1;Parent=gene-RM588_RS05135;Dbxref=GenBank:WP_037572590.1;Name=WP_037572590.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728735.1;locus_tag=RM588_RS05135;product=anthranilate synthase component II;protein_id=WP_037572590.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	346920	347591	.	+	.	ID=gene-RM588_RS05140;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=RM588_RS05140;old_locus_tag=RM588_05140
NZ_JAVRJR010000002.1	Protein Homology	CDS	346920	347591	.	+	0	ID=cds-WP_037572593.1;Parent=gene-RM588_RS05140;Dbxref=GenBank:WP_037572593.1;Name=WP_037572593.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424465.1;locus_tag=RM588_RS05140;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_037572593.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	347588	348019	.	+	.	ID=gene-RM588_RS05145;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=RM588_RS05145;old_locus_tag=RM588_05145
NZ_JAVRJR010000002.1	Protein Homology	CDS	347588	348019	.	+	0	ID=cds-WP_037572596.1;Parent=gene-RM588_RS05145;Dbxref=GenBank:WP_037572596.1;Name=WP_037572596.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614549.1;locus_tag=RM588_RS05145;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_037572596.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	348012	348725	.	+	.	ID=gene-RM588_RS05150;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=RM588_RS05150;old_locus_tag=RM588_05150
NZ_JAVRJR010000002.1	Protein Homology	CDS	348012	348725	.	+	0	ID=cds-WP_037572599.1;Parent=gene-RM588_RS05150;Dbxref=GenBank:WP_037572599.1;Name=WP_037572599.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=RM588_RS05150;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_037572599.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	348827	349414	.	+	.	ID=gene-RM588_RS05155;Name=RM588_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05155;old_locus_tag=RM588_05155
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	348827	349414	.	+	0	ID=cds-WP_037572602.1;Parent=gene-RM588_RS05155;Dbxref=GenBank:WP_037572602.1;Name=WP_037572602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS05155;product=hypothetical protein;protein_id=WP_037572602.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	349491	349748	.	+	.	ID=gene-RM588_RS05160;Name=RM588_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05160;old_locus_tag=RM588_05160
NZ_JAVRJR010000002.1	Protein Homology	CDS	349491	349748	.	+	0	ID=cds-WP_037572603.1;Parent=gene-RM588_RS05160;Dbxref=GenBank:WP_037572603.1;Name=WP_037572603.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481501.1;locus_tag=RM588_RS05160;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_037572603.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	350556	351533	.	-	.	ID=gene-RM588_RS05165;Name=RM588_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05165;old_locus_tag=RM588_05165
NZ_JAVRJR010000002.1	Protein Homology	CDS	350556	351533	.	-	0	ID=cds-WP_037572604.1;Parent=gene-RM588_RS05165;Dbxref=GenBank:WP_037572604.1;Name=WP_037572604.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637336.1;locus_tag=RM588_RS05165;product=glycosyltransferase family 2 protein;protein_id=WP_037572604.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	351860	353224	.	-	.	ID=gene-RM588_RS05170;Name=RM588_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05170;old_locus_tag=RM588_05170
NZ_JAVRJR010000002.1	Protein Homology	CDS	351860	353224	.	-	0	ID=cds-WP_037572605.1;Parent=gene-RM588_RS05170;Dbxref=GenBank:WP_037572605.1;Name=WP_037572605.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481493.1;locus_tag=RM588_RS05170;product=hemolysin family protein;protein_id=WP_037572605.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	353696	355615	.	-	.	ID=gene-RM588_RS05175;Name=RM588_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05175;old_locus_tag=RM588_05175
NZ_JAVRJR010000002.1	Protein Homology	CDS	353696	355615	.	-	0	ID=cds-WP_037572606.1;Parent=gene-RM588_RS05175;Dbxref=GenBank:WP_037572606.1;Name=WP_037572606.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=RM588_RS05175;product=PTS fructose transporter subunit IIABC;protein_id=WP_037572606.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	355617	356540	.	-	.	ID=gene-RM588_RS05180;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=RM588_RS05180;old_locus_tag=RM588_05180
NZ_JAVRJR010000002.1	Protein Homology	CDS	355617	356540	.	-	0	ID=cds-WP_037572607.1;Parent=gene-RM588_RS05180;Dbxref=GenBank:WP_037572607.1;Name=WP_037572607.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168552.1;locus_tag=RM588_RS05180;product=1-phosphofructokinase;protein_id=WP_037572607.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	356537	357292	.	-	.	ID=gene-RM588_RS05185;Name=RM588_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05185;old_locus_tag=RM588_05185
NZ_JAVRJR010000002.1	Protein Homology	CDS	356537	357292	.	-	0	ID=cds-WP_037572608.1;Parent=gene-RM588_RS05185;Dbxref=GenBank:WP_037572608.1;Name=WP_037572608.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424455.1;locus_tag=RM588_RS05185;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037572608.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	357445	357921	.	-	.	ID=gene-RM588_RS05190;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=RM588_RS05190;old_locus_tag=RM588_05190
NZ_JAVRJR010000002.1	Protein Homology	CDS	357445	357921	.	-	0	ID=cds-WP_105996683.1;Parent=gene-RM588_RS05190;Dbxref=GenBank:WP_105996683.1;Name=WP_105996683.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459774.1;locus_tag=RM588_RS05190;product=Cys-tRNA(Pro) deacylase;protein_id=WP_105996683.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	357940	360261	.	-	.	ID=gene-RM588_RS05195;Name=RM588_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05195;old_locus_tag=RM588_05195
NZ_JAVRJR010000002.1	Protein Homology	CDS	357940	360261	.	-	0	ID=cds-WP_311541327.1;Parent=gene-RM588_RS05195;Dbxref=GenBank:WP_311541327.1;Name=WP_311541327.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614562.1;locus_tag=RM588_RS05195;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_311541327.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	360330	361490	.	-	.	ID=gene-RM588_RS05200;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=RM588_RS05200;old_locus_tag=RM588_05200
NZ_JAVRJR010000002.1	Protein Homology	CDS	360330	361490	.	-	0	ID=cds-WP_037572613.1;Parent=gene-RM588_RS05200;Dbxref=GenBank:WP_037572613.1;Name=WP_037572613.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168559.1;locus_tag=RM588_RS05200;product=multidrug efflux MFS transporter NorA;protein_id=WP_037572613.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	361782	362399	.	+	.	ID=gene-RM588_RS05205;Name=RM588_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05205;old_locus_tag=RM588_05205
NZ_JAVRJR010000002.1	Protein Homology	CDS	361782	362399	.	+	0	ID=cds-WP_037572616.1;Parent=gene-RM588_RS05205;Dbxref=GenBank:WP_037572616.1;Name=WP_037572616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166171.1;locus_tag=RM588_RS05205;product=DUF1361 domain-containing protein;protein_id=WP_037572616.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	362686	363402	.	+	.	ID=gene-RM588_RS05215;Name=RM588_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05215;old_locus_tag=RM588_05215
NZ_JAVRJR010000002.1	Protein Homology	CDS	362686	363402	.	+	0	ID=cds-WP_107367094.1;Parent=gene-RM588_RS05215;Dbxref=GenBank:WP_107367094.1;Name=WP_107367094.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168562.1;locus_tag=RM588_RS05215;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_107367094.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	363623	364564	.	-	.	ID=gene-RM588_RS05220;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=RM588_RS05220;old_locus_tag=RM588_05220
NZ_JAVRJR010000002.1	Protein Homology	CDS	363623	364564	.	-	0	ID=cds-WP_107367093.1;Parent=gene-RM588_RS05220;Dbxref=GenBank:WP_107367093.1;Name=WP_107367093.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614567.1;locus_tag=RM588_RS05220;product=malate dehydrogenase;protein_id=WP_107367093.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	364705	364989	.	-	.	ID=gene-RM588_RS05225;Name=RM588_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05225;old_locus_tag=RM588_05225
NZ_JAVRJR010000002.1	Protein Homology	CDS	364705	364989	.	-	0	ID=cds-WP_037572624.1;Parent=gene-RM588_RS05225;Dbxref=GenBank:WP_037572624.1;Name=WP_037572624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614570.1;locus_tag=RM588_RS05225;product=hypothetical protein;protein_id=WP_037572624.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	365014	365922	.	-	.	ID=gene-RM588_RS05230;Name=RM588_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05230;old_locus_tag=RM588_05230
NZ_JAVRJR010000002.1	Protein Homology	CDS	365014	365922	.	-	0	ID=cds-WP_037572625.1;Parent=gene-RM588_RS05230;Dbxref=GenBank:WP_037572625.1;Name=WP_037572625.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166176.1;locus_tag=RM588_RS05230;product=aldo/keto reductase;protein_id=WP_037572625.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	365943	366863	.	-	.	ID=gene-RM588_RS05235;Name=RM588_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05235;old_locus_tag=RM588_05235
NZ_JAVRJR010000002.1	Protein Homology	CDS	365943	366863	.	-	0	ID=cds-WP_037572627.1;Parent=gene-RM588_RS05235;Dbxref=GenBank:WP_037572627.1;Name=WP_037572627.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014542.7;locus_tag=RM588_RS05235;product=CobW family GTP-binding protein;protein_id=WP_037572627.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	367084	367521	.	+	.	ID=gene-RM588_RS05240;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=RM588_RS05240;old_locus_tag=RM588_05240
NZ_JAVRJR010000002.1	Protein Homology	CDS	367084	367521	.	+	0	ID=cds-WP_037572629.1;Parent=gene-RM588_RS05240;Dbxref=GenBank:WP_037572629.1;Name=WP_037572629.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614573.1;locus_tag=RM588_RS05240;product=global transcriptional regulator MgrA;protein_id=WP_037572629.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	367890	369533	.	-	.	ID=gene-RM588_RS05245;Name=RM588_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05245;old_locus_tag=RM588_05245
NZ_JAVRJR010000002.1	Protein Homology	CDS	367890	369533	.	-	0	ID=cds-WP_165806203.1;Parent=gene-RM588_RS05245;Dbxref=GenBank:WP_165806203.1;Name=WP_165806203.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614574.1;locus_tag=RM588_RS05245;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WP_165806203.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	369590	371194	.	-	.	ID=gene-RM588_RS05250;Name=RM588_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05250;old_locus_tag=RM588_05250
NZ_JAVRJR010000002.1	Protein Homology	CDS	369590	371194	.	-	0	ID=cds-WP_103159336.1;Parent=gene-RM588_RS05250;Dbxref=GenBank:WP_103159336.1;Name=WP_103159336.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=L-cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737167.1;locus_tag=RM588_RS05250;product=ABC transporter ATP-binding protein/permease;protein_id=WP_103159336.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	371441	372295	.	+	.	ID=gene-RM588_RS05255;Name=RM588_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05255;old_locus_tag=RM588_05255
NZ_JAVRJR010000002.1	Protein Homology	CDS	371441	372295	.	+	0	ID=cds-WP_105962933.1;Parent=gene-RM588_RS05255;Dbxref=GenBank:WP_105962933.1;Name=WP_105962933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168570.1;locus_tag=RM588_RS05255;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_105962933.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	372601	373242	.	+	.	ID=gene-RM588_RS05260;Name=RM588_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05260;old_locus_tag=RM588_05260
NZ_JAVRJR010000002.1	Protein Homology	CDS	372601	373242	.	+	0	ID=cds-WP_037572638.1;Parent=gene-RM588_RS05260;Dbxref=GenBank:WP_037572638.1;Name=WP_037572638.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168913.1;locus_tag=RM588_RS05260;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_037572638.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	373280	373636	.	+	.	ID=gene-RM588_RS05265;Name=RM588_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05265;old_locus_tag=RM588_05265
NZ_JAVRJR010000002.1	Protein Homology	CDS	373280	373636	.	+	0	ID=cds-WP_037572641.1;Parent=gene-RM588_RS05265;Dbxref=GenBank:WP_037572641.1;Name=WP_037572641.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499528.1;locus_tag=RM588_RS05265;product=DoxX family protein;protein_id=WP_037572641.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	373993	375300	.	+	.	ID=gene-RM588_RS11405;Name=RM588_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11405
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	373993	375300	.	+	0	ID=cds-WP_069191673.1;Parent=gene-RM588_RS11405;Dbxref=GenBank:WP_069191673.1;Name=WP_069191673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS11405;product=hypothetical protein;protein_id=WP_069191673.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	375302	375763	.	+	.	ID=gene-RM588_RS05275;Name=RM588_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05275;old_locus_tag=RM588_05275
NZ_JAVRJR010000002.1	Protein Homology	CDS	375302	375763	.	+	0	ID=cds-WP_105996673.1;Parent=gene-RM588_RS05275;Dbxref=GenBank:WP_105996673.1;Name=WP_105996673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499248.1;locus_tag=RM588_RS05275;product=YaiI/YqxD family protein;protein_id=WP_105996673.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	375763	376329	.	+	.	ID=gene-RM588_RS05280;Name=RM588_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05280;old_locus_tag=RM588_05280
NZ_JAVRJR010000002.1	Protein Homology	CDS	375763	376329	.	+	0	ID=cds-WP_037573069.1;Parent=gene-RM588_RS05280;Dbxref=GenBank:WP_037573069.1;Name=WP_037573069.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487609.1;locus_tag=RM588_RS05280;product=LOG family protein;protein_id=WP_037573069.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	376368	376910	.	-	.	ID=gene-RM588_RS05285;Name=RM588_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05285;old_locus_tag=RM588_05285
NZ_JAVRJR010000002.1	Protein Homology	CDS	376368	376910	.	-	0	ID=cds-WP_165806204.1;Parent=gene-RM588_RS05285;Dbxref=GenBank:WP_165806204.1;Name=WP_165806204.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481469.1;locus_tag=RM588_RS05285;product=GNAT family N-acetyltransferase;protein_id=WP_165806204.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	377004	377303	.	-	.	ID=gene-RM588_RS05290;Name=RM588_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05290;old_locus_tag=RM588_05290
NZ_JAVRJR010000002.1	Protein Homology	CDS	377004	377303	.	-	0	ID=cds-WP_037572650.1;Parent=gene-RM588_RS05290;Dbxref=GenBank:WP_037572650.1;Name=WP_037572650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614581.1;locus_tag=RM588_RS05290;product=hypothetical protein;protein_id=WP_037572650.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	377404	377730	.	-	.	ID=gene-RM588_RS05295;Name=RM588_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05295;old_locus_tag=RM588_05295
NZ_JAVRJR010000002.1	Protein Homology	CDS	377404	377730	.	-	0	ID=cds-WP_233650031.1;Parent=gene-RM588_RS05295;Dbxref=GenBank:WP_233650031.1;Name=WP_233650031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166187.1;locus_tag=RM588_RS05295;product=SA0632 family lipoprotein;protein_id=WP_233650031.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	377795	378244	.	-	.	ID=gene-RM588_RS05300;Name=RM588_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05300;old_locus_tag=RM588_05300
NZ_JAVRJR010000002.1	Protein Homology	CDS	377795	378244	.	-	0	ID=cds-WP_165806205.1;Parent=gene-RM588_RS05300;Dbxref=GenBank:WP_165806205.1;Name=WP_165806205.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF025054.7;locus_tag=RM588_RS05300;product=GNAT family N-acetyltransferase;protein_id=WP_165806205.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	378336	379040	.	+	.	ID=gene-RM588_RS05305;Name=RM588_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05305;old_locus_tag=RM588_05305
NZ_JAVRJR010000002.1	Protein Homology	CDS	378336	379040	.	+	0	ID=cds-WP_103159333.1;Parent=gene-RM588_RS05305;Dbxref=GenBank:WP_103159333.1;Name=WP_103159333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166189.1;locus_tag=RM588_RS05305;product=DUF1129 family protein;protein_id=WP_103159333.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	379243	379731	.	-	.	ID=gene-RM588_RS05310;Name=RM588_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05310;old_locus_tag=RM588_05310
NZ_JAVRJR010000002.1	Protein Homology	CDS	379243	379731	.	-	0	ID=cds-WP_037572658.1;Parent=gene-RM588_RS05310;Dbxref=GenBank:WP_037572658.1;Name=WP_037572658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187125.1;locus_tag=RM588_RS05310;product=DUF456 domain-containing protein;protein_id=WP_037572658.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	379750	380952	.	-	.	ID=gene-RM588_RS05315;Name=RM588_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05315;old_locus_tag=RM588_05315
NZ_JAVRJR010000002.1	Protein Homology	CDS	379750	380952	.	-	0	ID=cds-WP_165806206.1;Parent=gene-RM588_RS05315;Dbxref=GenBank:WP_165806206.1;Name=WP_165806206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383172.1;locus_tag=RM588_RS05315;product=sugar efflux transporter;protein_id=WP_165806206.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	380971	381837	.	-	.	ID=gene-RM588_RS05320;Name=RM588_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05320;old_locus_tag=RM588_05320
NZ_JAVRJR010000002.1	Protein Homology	CDS	380971	381837	.	-	0	ID=cds-WP_037572662.1;Parent=gene-RM588_RS05320;Dbxref=GenBank:WP_037572662.1;Name=WP_037572662.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687413.1;locus_tag=RM588_RS05320;product=LysR family transcriptional regulator;protein_id=WP_037572662.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	381925	382503	.	-	.	ID=gene-RM588_RS05325;Name=RM588_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05325;old_locus_tag=RM588_05325
NZ_JAVRJR010000002.1	Protein Homology	CDS	381925	382503	.	-	0	ID=cds-WP_069191674.1;Parent=gene-RM588_RS05325;Dbxref=GenBank:WP_069191674.1;Name=WP_069191674.1;Ontology_term=GO:0006364,GO:0003723,GO:0016891;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614588.1;locus_tag=RM588_RS05325;product=ribonuclease FAU-1 family protein;protein_id=WP_069191674.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	382720	383433	.	-	.	ID=gene-RM588_RS05330;Name=RM588_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05330;old_locus_tag=RM588_05330
NZ_JAVRJR010000002.1	Protein Homology	CDS	382720	383433	.	-	0	ID=cds-WP_105962931.1;Parent=gene-RM588_RS05330;Dbxref=GenBank:WP_105962931.1;Name=WP_105962931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424428.1;locus_tag=RM588_RS05330;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_105962931.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	383508	384506	.	-	.	ID=gene-RM588_RS05335;Name=RM588_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05335;old_locus_tag=RM588_05335
NZ_JAVRJR010000002.1	Protein Homology	CDS	383508	384506	.	-	0	ID=cds-WP_165806207.1;Parent=gene-RM588_RS05335;Dbxref=GenBank:WP_165806207.1;Name=WP_165806207.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614591.1;locus_tag=RM588_RS05335;product=HesA/MoeB/ThiF family protein;protein_id=WP_165806207.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	384506	385273	.	-	.	ID=gene-RM588_RS05340;Name=RM588_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05340;old_locus_tag=RM588_05340
NZ_JAVRJR010000002.1	Protein Homology	CDS	384506	385273	.	-	0	ID=cds-WP_165806208.1;Parent=gene-RM588_RS05340;Dbxref=GenBank:WP_165806208.1;Name=WP_165806208.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728710.1;locus_tag=RM588_RS05340;product=thiazole synthase;protein_id=WP_165806208.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	385275	385475	.	-	.	ID=gene-RM588_RS05345;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=RM588_RS05345;old_locus_tag=RM588_05345
NZ_JAVRJR010000002.1	Protein Homology	CDS	385275	385475	.	-	0	ID=cds-WP_037572673.1;Parent=gene-RM588_RS05345;Dbxref=GenBank:WP_037572673.1;Name=WP_037572673.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009036520.1;locus_tag=RM588_RS05345;product=sulfur carrier protein ThiS;protein_id=WP_037572673.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	385459	386058	.	-	.	ID=gene-RM588_RS05350;Name=RM588_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05350;old_locus_tag=RM588_05350
NZ_JAVRJR010000002.1	Protein Homology	CDS	385459	386058	.	-	0	ID=cds-WP_051604941.1;Parent=gene-RM588_RS05350;Dbxref=GenBank:WP_051604941.1;Name=WP_051604941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014622.7;locus_tag=RM588_RS05350;product=thiamine phosphate synthase;protein_id=WP_051604941.1;transl_table=11
NZ_JAVRJR010000002.1	cmsearch	riboswitch	386117	386225	.	-	.	ID=id-NZ_JAVRJR010000002.1:386117..386225;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000002.1	RefSeq	gene	386240	386875	.	-	.	ID=gene-RM588_RS05355;Name=RM588_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05355;old_locus_tag=RM588_05355
NZ_JAVRJR010000002.1	Protein Homology	CDS	386240	386875	.	-	0	ID=cds-WP_084275979.1;Parent=gene-RM588_RS05355;Dbxref=GenBank:WP_084275979.1;Name=WP_084275979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472547.1;locus_tag=RM588_RS05355;product=Bax inhibitor-1/YccA family protein;protein_id=WP_084275979.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	387157	387978	.	+	.	ID=gene-RM588_RS05360;Name=RM588_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05360;old_locus_tag=RM588_05360
NZ_JAVRJR010000002.1	Protein Homology	CDS	387157	387978	.	+	0	ID=cds-WP_037572675.1;Parent=gene-RM588_RS05360;Dbxref=GenBank:WP_037572675.1;Name=WP_037572675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303705.1;locus_tag=RM588_RS05360;product=CHAP domain-containing protein;protein_id=WP_037572675.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	388200	389201	.	-	.	ID=gene-RM588_RS05365;Name=RM588_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05365;old_locus_tag=RM588_05365
NZ_JAVRJR010000002.1	Protein Homology	CDS	388200	389201	.	-	0	ID=cds-WP_037572676.1;Parent=gene-RM588_RS05365;Dbxref=GenBank:WP_037572676.1;Name=WP_037572676.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614597.1;locus_tag=RM588_RS05365;product=inorganic phosphate transporter;protein_id=WP_037572676.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	389216	389833	.	-	.	ID=gene-RM588_RS05370;Name=RM588_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05370;old_locus_tag=RM588_05370
NZ_JAVRJR010000002.1	Protein Homology	CDS	389216	389833	.	-	0	ID=cds-WP_037572680.1;Parent=gene-RM588_RS05370;Dbxref=GenBank:WP_037572680.1;Name=WP_037572680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=RM588_RS05370;product=DUF47 domain-containing protein;protein_id=WP_037572680.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	390346	391293	.	-	.	ID=gene-RM588_RS05375;Name=RM588_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05375;old_locus_tag=RM588_05375
NZ_JAVRJR010000002.1	Protein Homology	CDS	390346	391293	.	-	0	ID=cds-WP_037572682.1;Parent=gene-RM588_RS05375;Dbxref=GenBank:WP_037572682.1;Name=WP_037572682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424404.1;locus_tag=RM588_RS05375;product=NAD(P)H-binding protein;protein_id=WP_037572682.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	391406	391912	.	+	.	ID=gene-RM588_RS05380;Name=RM588_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05380;old_locus_tag=RM588_05380
NZ_JAVRJR010000002.1	Protein Homology	CDS	391406	391912	.	+	0	ID=cds-WP_037572684.1;Parent=gene-RM588_RS05380;Dbxref=GenBank:WP_037572684.1;Name=WP_037572684.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166208.1;locus_tag=RM588_RS05380;product=GNAT family N-acetyltransferase;protein_id=WP_037572684.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	392142	393182	.	-	.	ID=gene-RM588_RS05385;Name=RM588_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05385;old_locus_tag=RM588_05385
NZ_JAVRJR010000002.1	Protein Homology	CDS	392142	393182	.	-	0	ID=cds-WP_311548088.1;Parent=gene-RM588_RS05385;Dbxref=GenBank:WP_311548088.1;Name=WP_311548088.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614605.1;locus_tag=RM588_RS05385;product=alpha/beta hydrolase;protein_id=WP_311548088.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	393225	394292	.	-	.	ID=gene-RM588_RS05390;Name=RM588_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05390;old_locus_tag=RM588_05390
NZ_JAVRJR010000002.1	Protein Homology	CDS	393225	394292	.	-	0	ID=cds-WP_037572688.1;Parent=gene-RM588_RS05390;Dbxref=GenBank:WP_037572688.1;Name=WP_037572688.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614606.1;locus_tag=RM588_RS05390;product=YkvI family membrane protein;protein_id=WP_037572688.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	394533	395972	.	-	.	ID=gene-RM588_RS05395;Name=RM588_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05395;old_locus_tag=RM588_05395
NZ_JAVRJR010000002.1	Protein Homology	CDS	394533	395972	.	-	0	ID=cds-WP_233654975.1;Parent=gene-RM588_RS05395;Dbxref=GenBank:WP_233654975.1;Name=WP_233654975.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166211.1;locus_tag=RM588_RS05395;product=MDR family MFS transporter;protein_id=WP_233654975.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	396161	396661	.	-	.	ID=gene-RM588_RS05400;Name=RM588_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05400;old_locus_tag=RM588_05400
NZ_JAVRJR010000002.1	Protein Homology	CDS	396161	396661	.	-	0	ID=cds-WP_037572694.1;Parent=gene-RM588_RS05400;Dbxref=GenBank:WP_037572694.1;Name=WP_037572694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490528.1;locus_tag=RM588_RS05400;product=hypothetical protein;protein_id=WP_037572694.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	396827	397843	.	-	.	ID=gene-RM588_RS05405;Name=RM588_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05405;old_locus_tag=RM588_05405
NZ_JAVRJR010000002.1	Protein Homology	CDS	396827	397843	.	-	0	ID=cds-WP_165806210.1;Parent=gene-RM588_RS05405;Dbxref=GenBank:WP_165806210.1;Name=WP_165806210.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594829.1;locus_tag=RM588_RS05405;product=FecCD family ABC transporter permease;protein_id=WP_165806210.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	397840	398799	.	-	.	ID=gene-RM588_RS05410;Name=RM588_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05410;old_locus_tag=RM588_05410
NZ_JAVRJR010000002.1	Protein Homology	CDS	397840	398799	.	-	0	ID=cds-WP_051604946.1;Parent=gene-RM588_RS05410;Dbxref=GenBank:WP_051604946.1;Name=WP_051604946.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508382.1;locus_tag=RM588_RS05410;product=FecCD family ABC transporter permease;protein_id=WP_051604946.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	398864	399670	.	-	.	ID=gene-RM588_RS05415;Name=RM588_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05415;old_locus_tag=RM588_05415
NZ_JAVRJR010000002.1	Protein Homology	CDS	398864	399670	.	-	0	ID=cds-WP_103159326.1;Parent=gene-RM588_RS05415;Dbxref=GenBank:WP_103159326.1;Name=WP_103159326.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722609.1;locus_tag=RM588_RS05415;product=ABC transporter ATP-binding protein;protein_id=WP_103159326.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	399944	400777	.	-	.	ID=gene-RM588_RS05420;Name=RM588_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05420;old_locus_tag=RM588_05420
NZ_JAVRJR010000002.1	Protein Homology	CDS	399944	400777	.	-	0	ID=cds-WP_037572705.1;Parent=gene-RM588_RS05420;Dbxref=GenBank:WP_037572705.1;Name=WP_037572705.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168606.1;locus_tag=RM588_RS05420;product=YitT family protein;protein_id=WP_037572705.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	401330	402556	.	-	.	ID=gene-RM588_RS05425;Name=RM588_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05425;old_locus_tag=RM588_05425
NZ_JAVRJR010000002.1	Protein Homology	CDS	401330	402556	.	-	0	ID=cds-WP_311548089.1;Parent=gene-RM588_RS05425;Dbxref=GenBank:WP_311548089.1;Name=WP_311548089.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499208.1;locus_tag=RM588_RS05425;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_311548089.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	402827	403063	.	+	.	ID=gene-RM588_RS05430;Name=RM588_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05430;old_locus_tag=RM588_05430
NZ_JAVRJR010000002.1	Protein Homology	CDS	402827	403063	.	+	0	ID=cds-WP_311548090.1;Parent=gene-RM588_RS05430;Dbxref=GenBank:WP_311548090.1;Name=WP_311548090.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168608.1;locus_tag=RM588_RS05430;product=FeoA family protein;protein_id=WP_311548090.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	403056	405050	.	+	.	ID=gene-RM588_RS05435;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=RM588_RS05435;old_locus_tag=RM588_05435
NZ_JAVRJR010000002.1	Protein Homology	CDS	403056	405050	.	+	0	ID=cds-WP_105962923.1;Parent=gene-RM588_RS05435;Dbxref=GenBank:WP_105962923.1;Name=WP_105962923.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424392.1;locus_tag=RM588_RS05435;product=ferrous iron transport protein B;protein_id=WP_105962923.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	405062	405223	.	+	.	ID=gene-RM588_RS05440;Name=RM588_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05440;old_locus_tag=RM588_05440
NZ_JAVRJR010000002.1	Protein Homology	CDS	405062	405223	.	+	0	ID=cds-WP_037572717.1;Parent=gene-RM588_RS05440;Dbxref=GenBank:WP_037572717.1;Name=WP_037572717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424391.1;locus_tag=RM588_RS05440;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_037572717.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	405274	406998	.	-	.	ID=gene-RM588_RS05445;Name=RM588_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05445;old_locus_tag=RM588_05445
NZ_JAVRJR010000002.1	Protein Homology	CDS	405274	406998	.	-	0	ID=cds-WP_105996667.1;Parent=gene-RM588_RS05445;Dbxref=GenBank:WP_105996667.1;Name=WP_105996667.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614617.1;locus_tag=RM588_RS05445;product=ABC transporter ATP-binding protein;protein_id=WP_105996667.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	407256	408539	.	+	.	ID=gene-RM588_RS05450;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=RM588_RS05450;old_locus_tag=RM588_05450
NZ_JAVRJR010000002.1	Protein Homology	CDS	407256	408539	.	+	0	ID=cds-WP_103159322.1;Parent=gene-RM588_RS05450;Dbxref=GenBank:WP_103159322.1;Name=WP_103159322.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499206.1;locus_tag=RM588_RS05450;product=penicillin-binding protein PBP4;protein_id=WP_103159322.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	408589	408987	.	-	.	ID=gene-RM588_RS05455;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=RM588_RS05455;old_locus_tag=RM588_05455
NZ_JAVRJR010000002.1	Protein Homology	CDS	408589	408987	.	-	0	ID=cds-WP_037572723.1;Parent=gene-RM588_RS05455;Dbxref=GenBank:WP_037572723.1;Name=WP_037572723.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=RM588_RS05455;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_037572723.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	409131	410222	.	-	.	ID=gene-RM588_RS05460;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=RM588_RS05460;old_locus_tag=RM588_05460
NZ_JAVRJR010000002.1	Protein Homology	CDS	409131	410222	.	-	0	ID=cds-WP_105965117.1;Parent=gene-RM588_RS05460;Dbxref=GenBank:WP_105965117.1;Name=WP_105965117.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168614.1;locus_tag=RM588_RS05460;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_105965117.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	410402	411205	.	-	.	ID=gene-RM588_RS05465;Name=RM588_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05465;old_locus_tag=RM588_05465
NZ_JAVRJR010000002.1	Protein Homology	CDS	410402	411205	.	-	0	ID=cds-WP_037573082.1;Parent=gene-RM588_RS05465;Dbxref=GenBank:WP_037573082.1;Name=WP_037573082.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457546.1;locus_tag=RM588_RS05465;product=ABC transporter permease;protein_id=WP_037573082.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	411606	412400	.	+	.	ID=gene-RM588_RS05470;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=RM588_RS05470;old_locus_tag=RM588_05470
NZ_JAVRJR010000002.1	Protein Homology	CDS	411606	412400	.	+	0	ID=cds-WP_037572727.1;Parent=gene-RM588_RS05470;Dbxref=GenBank:WP_037572727.1;Name=WP_037572727.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=RM588_RS05470;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_037572727.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	412554	413324	.	-	.	ID=gene-RM588_RS05475;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=RM588_RS05475;old_locus_tag=RM588_05475
NZ_JAVRJR010000002.1	Protein Homology	CDS	412554	413324	.	-	0	ID=cds-WP_037573084.1;Parent=gene-RM588_RS05475;Dbxref=GenBank:WP_037573084.1;Name=WP_037573084.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424384.1;locus_tag=RM588_RS05475;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_037573084.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	413617	413724	.	+	.	ID=gene-RM588_RS11310;Name=RM588_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11310
NZ_JAVRJR010000002.1	Protein Homology	CDS	413617	413724	.	+	0	ID=cds-WP_105962920.1;Parent=gene-RM588_RS11310;Dbxref=GenBank:WP_105962920.1;Name=WP_105962920.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: protein motif:HMM:NF023880.7;locus_tag=RM588_RS11310;product=maltose acetyltransferase domain-containing protein;protein_id=WP_105962920.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	pseudogene	414000	414211	.	+	.	ID=gene-RM588_RS11315;Name=RM588_RS11315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11315;partial=true;pseudo=true;start_range=.,414000
NZ_JAVRJR010000002.1	Protein Homology	CDS	414000	414211	.	+	0	ID=cds-RM588_RS11315;Parent=gene-RM588_RS11315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328813.1;locus_tag=RM588_RS11315;partial=true;product=DapH/DapD/GlmU-related protein;pseudo=true;start_range=.,414000;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	414243	414989	.	+	.	ID=gene-RM588_RS05485;Name=RM588_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05485;old_locus_tag=RM588_05485
NZ_JAVRJR010000002.1	Protein Homology	CDS	414243	414989	.	+	0	ID=cds-WP_037572729.1;Parent=gene-RM588_RS05485;Dbxref=GenBank:WP_037572729.1;Name=WP_037572729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424383.1;locus_tag=RM588_RS05485;product=M50 family metallopeptidase;protein_id=WP_037572729.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	415555	416202	.	-	.	ID=gene-RM588_RS05490;Name=RM588_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05490;old_locus_tag=RM588_05490
NZ_JAVRJR010000002.1	Protein Homology	CDS	415555	416202	.	-	0	ID=cds-WP_107371774.1;Parent=gene-RM588_RS05490;Dbxref=GenBank:WP_107371774.1;Name=WP_107371774.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459837.1;locus_tag=RM588_RS05490;product=metal-dependent transcriptional regulator;protein_id=WP_107371774.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	416323	417099	.	+	.	ID=gene-RM588_RS05495;Name=RM588_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05495;old_locus_tag=RM588_05495
NZ_JAVRJR010000002.1	Protein Homology	CDS	416323	417099	.	+	0	ID=cds-WP_037572733.1;Parent=gene-RM588_RS05495;Dbxref=GenBank:WP_037572733.1;Name=WP_037572733.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424381.1;locus_tag=RM588_RS05495;product=metal ABC transporter ATP-binding protein;protein_id=WP_037572733.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	417074	417913	.	+	.	ID=gene-RM588_RS05500;Name=RM588_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05500;old_locus_tag=RM588_05500
NZ_JAVRJR010000002.1	Protein Homology	CDS	417074	417913	.	+	0	ID=cds-WP_037572735.1;Parent=gene-RM588_RS05500;Dbxref=GenBank:WP_037572735.1;Name=WP_037572735.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167323.1;locus_tag=RM588_RS05500;product=metal ABC transporter permease;protein_id=WP_037572735.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	417913	418827	.	+	.	ID=gene-RM588_RS05505;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=RM588_RS05505;old_locus_tag=RM588_05505
NZ_JAVRJR010000002.1	Protein Homology	CDS	417913	418827	.	+	0	ID=cds-WP_037573086.1;Parent=gene-RM588_RS05505;Dbxref=GenBank:WP_037573086.1;Name=WP_037573086.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737654.1;locus_tag=RM588_RS05505;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_037573086.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	419413	419856	.	-	.	ID=gene-RM588_RS05510;Name=RM588_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05510;old_locus_tag=RM588_05510
NZ_JAVRJR010000002.1	Protein Homology	CDS	419413	419856	.	-	0	ID=cds-WP_103159317.1;Parent=gene-RM588_RS05510;Dbxref=GenBank:WP_103159317.1;Name=WP_103159317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424378.1;locus_tag=RM588_RS05510;product=Na+/H+ antiporter subunit G;protein_id=WP_103159317.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	419831	420133	.	-	.	ID=gene-RM588_RS05515;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=RM588_RS05515;old_locus_tag=RM588_05515
NZ_JAVRJR010000002.1	Protein Homology	CDS	419831	420133	.	-	0	ID=cds-WP_037572739.1;Parent=gene-RM588_RS05515;Dbxref=GenBank:WP_037572739.1;Name=WP_037572739.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276529.1;locus_tag=RM588_RS05515;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WP_037572739.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	420130	420612	.	-	.	ID=gene-RM588_RS05520;Name=RM588_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05520;old_locus_tag=RM588_05520
NZ_JAVRJR010000002.1	Protein Homology	CDS	420130	420612	.	-	0	ID=cds-WP_311548091.1;Parent=gene-RM588_RS05520;Dbxref=GenBank:WP_311548091.1;Name=WP_311548091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071971.1;locus_tag=RM588_RS05520;product=Na+/H+ antiporter subunit E;protein_id=WP_311548091.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	420609	422111	.	-	.	ID=gene-RM588_RS05525;Name=RM588_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05525;old_locus_tag=RM588_05525
NZ_JAVRJR010000002.1	Protein Homology	CDS	420609	422111	.	-	0	ID=cds-WP_037572743.1;Parent=gene-RM588_RS05525;Dbxref=GenBank:WP_037572743.1;Name=WP_037572743.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499190.1;locus_tag=RM588_RS05525;product=Na+/H+ antiporter subunit D;protein_id=WP_037572743.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	422104	422448	.	-	.	ID=gene-RM588_RS05530;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=RM588_RS05530;old_locus_tag=RM588_05530
NZ_JAVRJR010000002.1	Protein Homology	CDS	422104	422448	.	-	0	ID=cds-WP_037572746.1;Parent=gene-RM588_RS05530;Dbxref=GenBank:WP_037572746.1;Name=WP_037572746.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441278.1;locus_tag=RM588_RS05530;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_037572746.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	422445	422870	.	-	.	ID=gene-RM588_RS05535;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=RM588_RS05535;old_locus_tag=RM588_05535
NZ_JAVRJR010000002.1	Protein Homology	CDS	422445	422870	.	-	0	ID=cds-WP_037572748.1;Parent=gene-RM588_RS05535;Dbxref=GenBank:WP_037572748.1;Name=WP_037572748.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303737.1;locus_tag=RM588_RS05535;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WP_037572748.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	422857	425241	.	-	.	ID=gene-RM588_RS05540;Name=RM588_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05540;old_locus_tag=RM588_05540
NZ_JAVRJR010000002.1	Protein Homology	CDS	422857	425241	.	-	0	ID=cds-WP_037572750.1;Parent=gene-RM588_RS05540;Dbxref=GenBank:WP_037572750.1;Name=WP_037572750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276534.1;locus_tag=RM588_RS05540;product=DUF4040 family protein;protein_id=WP_037572750.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	425267	425818	.	-	.	ID=gene-RM588_RS05545;Name=RM588_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05545;old_locus_tag=RM588_05545
NZ_JAVRJR010000002.1	Protein Homology	CDS	425267	425818	.	-	0	ID=cds-WP_037572752.1;Parent=gene-RM588_RS05545;Dbxref=GenBank:WP_037572752.1;Name=WP_037572752.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614652.1;locus_tag=RM588_RS05545;product=tyrosine-type recombinase/integrase;protein_id=WP_037572752.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	425963	426166	.	+	.	ID=gene-RM588_RS05550;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=RM588_RS05550;old_locus_tag=RM588_05550
NZ_JAVRJR010000002.1	Protein Homology	CDS	425963	426166	.	+	0	ID=cds-WP_037572754.1;Parent=gene-RM588_RS05550;Dbxref=GenBank:WP_037572754.1;Name=WP_037572754.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167334.1;locus_tag=RM588_RS05550;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_037572754.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	426181	426396	.	+	.	ID=gene-RM588_RS05555;Name=RM588_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05555;old_locus_tag=RM588_05555
NZ_JAVRJR010000002.1	Protein Homology	CDS	426181	426396	.	+	0	ID=cds-WP_037572755.1;Parent=gene-RM588_RS05555;Dbxref=GenBank:WP_037572755.1;Name=WP_037572755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424369.1;locus_tag=RM588_RS05555;product=DUF2922 domain-containing protein;protein_id=WP_037572755.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	426850	427035	.	-	.	ID=gene-RM588_RS05560;Name=RM588_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05560
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	426850	427035	.	-	0	ID=cds-WP_051604942.1;Parent=gene-RM588_RS05560;Dbxref=GenBank:WP_051604942.1;Name=WP_051604942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS05560;product=hypothetical protein;protein_id=WP_051604942.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	427269	428192	.	+	.	ID=gene-RM588_RS05565;Name=RM588_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05565;old_locus_tag=RM588_05560
NZ_JAVRJR010000002.1	Protein Homology	CDS	427269	428192	.	+	0	ID=cds-WP_311542618.1;Parent=gene-RM588_RS05565;Dbxref=GenBank:WP_311542618.1;Name=WP_311542618.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167338.1;locus_tag=RM588_RS05565;product=DMT family transporter;protein_id=WP_311542618.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	428553	429467	.	+	.	ID=gene-RM588_RS05570;Name=RM588_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05570;old_locus_tag=RM588_05565
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	428553	429467	.	+	0	ID=cds-WP_037572758.1;Parent=gene-RM588_RS05570;Dbxref=GenBank:WP_037572758.1;Name=WP_037572758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS05570;product=hypothetical protein;protein_id=WP_037572758.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	429817	430188	.	+	.	ID=gene-RM588_RS05575;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=RM588_RS05575;old_locus_tag=RM588_05570
NZ_JAVRJR010000002.1	Protein Homology	CDS	429817	430188	.	+	0	ID=cds-WP_037566374.1;Parent=gene-RM588_RS05575;Dbxref=GenBank:WP_037566374.1;Name=WP_037566374.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424365.1;locus_tag=RM588_RS05575;product=global transcriptional regulator SarA;protein_id=WP_037566374.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	430379	431161	.	-	.	ID=gene-RM588_RS05580;Name=RM588_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05580;old_locus_tag=RM588_05575
NZ_JAVRJR010000002.1	Protein Homology	CDS	430379	431161	.	-	0	ID=cds-WP_103159315.1;Parent=gene-RM588_RS05580;Dbxref=GenBank:WP_103159315.1;Name=WP_103159315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.7;locus_tag=RM588_RS05580;product=alpha/beta fold hydrolase;protein_id=WP_103159315.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	431320	432036	.	-	.	ID=gene-RM588_RS05585;Name=RM588_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05585;old_locus_tag=RM588_05580
NZ_JAVRJR010000002.1	Protein Homology	CDS	431320	432036	.	-	0	ID=cds-WP_311542617.1;Parent=gene-RM588_RS05585;Dbxref=GenBank:WP_311542617.1;Name=WP_311542617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614658.1;locus_tag=RM588_RS05585;product=hypothetical protein;protein_id=WP_311542617.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	432200	432706	.	-	.	ID=gene-RM588_RS05590;Name=RM588_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05590;old_locus_tag=RM588_05585
NZ_JAVRJR010000002.1	Protein Homology	CDS	432200	432706	.	-	0	ID=cds-WP_105962918.1;Parent=gene-RM588_RS05590;Dbxref=GenBank:WP_105962918.1;Name=WP_105962918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=RM588_RS05590;product=SA0570 family protein;protein_id=WP_105962918.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	432799	433596	.	-	.	ID=gene-RM588_RS05595;Name=RM588_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05595;old_locus_tag=RM588_05590
NZ_JAVRJR010000002.1	Protein Homology	CDS	432799	433596	.	-	0	ID=cds-WP_037572768.1;Parent=gene-RM588_RS05595;Dbxref=GenBank:WP_037572768.1;Name=WP_037572768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484047.1;locus_tag=RM588_RS05595;product=alpha/beta fold hydrolase;protein_id=WP_037572768.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	433596	434300	.	-	.	ID=gene-RM588_RS05600;Name=RM588_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05600;old_locus_tag=RM588_05595
NZ_JAVRJR010000002.1	Protein Homology	CDS	433596	434300	.	-	0	ID=cds-WP_037572770.1;Parent=gene-RM588_RS05600;Dbxref=GenBank:WP_037572770.1;Name=WP_037572770.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220026.1;locus_tag=RM588_RS05600;product=HAD family hydrolase;protein_id=WP_037572770.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	434397	435362	.	-	.	ID=gene-RM588_RS05605;Name=RM588_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05605;old_locus_tag=RM588_05600
NZ_JAVRJR010000002.1	Protein Homology	CDS	434397	435362	.	-	0	ID=cds-WP_037572773.1;Parent=gene-RM588_RS05605;Dbxref=GenBank:WP_037572773.1;Name=WP_037572773.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167343.1;locus_tag=RM588_RS05605;product=FecCD family ABC transporter permease;protein_id=WP_037572773.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	435349	436233	.	-	.	ID=gene-RM588_RS05610;Name=RM588_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05610;old_locus_tag=RM588_05605
NZ_JAVRJR010000002.1	Protein Homology	CDS	435349	436233	.	-	0	ID=cds-WP_037572775.1;Parent=gene-RM588_RS05610;Dbxref=GenBank:WP_037572775.1;Name=WP_037572775.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728678.1;locus_tag=RM588_RS05610;product=ABC transporter substrate-binding protein;protein_id=WP_037572775.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	436395	438053	.	-	.	ID=gene-RM588_RS05615;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=RM588_RS05615;old_locus_tag=RM588_05610
NZ_JAVRJR010000002.1	Protein Homology	CDS	436395	438053	.	-	0	ID=cds-WP_037572777.1;Parent=gene-RM588_RS05615;Dbxref=GenBank:WP_037572777.1;Name=WP_037572777.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=RM588_RS05615;product=arginine--tRNA ligase;protein_id=WP_037572777.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	438040	438465	.	-	.	ID=gene-RM588_RS05620;Name=RM588_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05620;old_locus_tag=RM588_05615
NZ_JAVRJR010000002.1	Protein Homology	CDS	438040	438465	.	-	0	ID=cds-WP_037572779.1;Parent=gene-RM588_RS05620;Dbxref=GenBank:WP_037572779.1;Name=WP_037572779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359087.1;locus_tag=RM588_RS05620;product=YwiB family protein;protein_id=WP_037572779.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	438576	439082	.	-	.	ID=gene-RM588_RS05625;Name=RM588_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05625;old_locus_tag=RM588_05620
NZ_JAVRJR010000002.1	Protein Homology	CDS	438576	439082	.	-	0	ID=cds-WP_103159312.1;Parent=gene-RM588_RS05625;Dbxref=GenBank:WP_103159312.1;Name=WP_103159312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384646.1;locus_tag=RM588_RS05625;product=YwhD family protein;protein_id=WP_103159312.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	439106	440407	.	-	.	ID=gene-RM588_RS05630;Name=RM588_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05630;old_locus_tag=RM588_05625
NZ_JAVRJR010000002.1	Protein Homology	CDS	439106	440407	.	-	0	ID=cds-WP_037572785.1;Parent=gene-RM588_RS05630;Dbxref=GenBank:WP_037572785.1;Name=WP_037572785.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930870.1;locus_tag=RM588_RS05630;product=HD domain-containing protein;protein_id=WP_037572785.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	440429	440911	.	-	.	ID=gene-RM588_RS05635;Name=RM588_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05635;old_locus_tag=RM588_05630
NZ_JAVRJR010000002.1	Protein Homology	CDS	440429	440911	.	-	0	ID=cds-WP_037572788.1;Parent=gene-RM588_RS05635;Dbxref=GenBank:WP_037572788.1;Name=WP_037572788.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167178.1;locus_tag=RM588_RS05635;product=GNAT family N-acetyltransferase;protein_id=WP_037572788.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	441080	441619	.	-	.	ID=gene-RM588_RS05640;Name=RM588_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05640;old_locus_tag=RM588_05635
NZ_JAVRJR010000002.1	Protein Homology	CDS	441080	441619	.	-	0	ID=cds-WP_037572791.1;Parent=gene-RM588_RS05640;Dbxref=GenBank:WP_037572791.1;Name=WP_037572791.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176045.1;locus_tag=RM588_RS05640;product=flavodoxin family protein;protein_id=WP_037572791.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	442008	442355	.	-	.	ID=gene-RM588_RS05645;Name=RM588_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05645;old_locus_tag=RM588_05640
NZ_JAVRJR010000002.1	Protein Homology	CDS	442008	442355	.	-	0	ID=cds-WP_107366405.1;Parent=gene-RM588_RS05645;Dbxref=GenBank:WP_107366405.1;Name=WP_107366405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=RM588_RS05645;product=YuzB family protein;protein_id=WP_107366405.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	442477	444018	.	-	.	ID=gene-RM588_RS05650;Name=RM588_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05650;old_locus_tag=RM588_05645
NZ_JAVRJR010000002.1	Protein Homology	CDS	442477	444018	.	-	0	ID=cds-WP_375713813.1;Parent=gene-RM588_RS05650;Dbxref=GenBank:WP_375713813.1;Name=WP_375713813.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509151.1;locus_tag=RM588_RS05650;product=SLC13 family permease;protein_id=WP_375713813.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	444721	445188	.	-	.	ID=gene-RM588_RS05655;Name=RM588_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05655;old_locus_tag=RM588_05650
NZ_JAVRJR010000002.1	Protein Homology	CDS	444721	445188	.	-	0	ID=cds-WP_037572799.1;Parent=gene-RM588_RS05655;Dbxref=GenBank:WP_037572799.1;Name=WP_037572799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303973.1;locus_tag=RM588_RS05655;product=threonine/serine exporter family protein;protein_id=WP_037572799.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	445193	445909	.	-	.	ID=gene-RM588_RS05660;Name=RM588_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05660;old_locus_tag=RM588_05655
NZ_JAVRJR010000002.1	Protein Homology	CDS	445193	445909	.	-	0	ID=cds-WP_311541337.1;Parent=gene-RM588_RS05660;Dbxref=GenBank:WP_311541337.1;Name=WP_311541337.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166290.1;locus_tag=RM588_RS05660;product=threonine/serine exporter family protein;protein_id=WP_311541337.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	445988	447334	.	-	.	ID=gene-RM588_RS05665;Name=RM588_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05665;old_locus_tag=RM588_05660
NZ_JAVRJR010000002.1	Protein Homology	CDS	445988	447334	.	-	0	ID=cds-WP_037572803.1;Parent=gene-RM588_RS05665;Dbxref=GenBank:WP_037572803.1;Name=WP_037572803.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912338.1;locus_tag=RM588_RS05665;product=APC family permease;protein_id=WP_037572803.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	447566	448315	.	-	.	ID=gene-RM588_RS05670;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=RM588_RS05670;old_locus_tag=RM588_05665
NZ_JAVRJR010000002.1	Protein Homology	CDS	447566	448315	.	-	0	ID=cds-WP_037572806.1;Parent=gene-RM588_RS05670;Dbxref=GenBank:WP_037572806.1;Name=WP_037572806.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=RM588_RS05670;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_037572806.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	448564	449553	.	+	.	ID=gene-RM588_RS05675;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=RM588_RS05675;old_locus_tag=RM588_05670
NZ_JAVRJR010000002.1	Protein Homology	CDS	448564	449553	.	+	0	ID=cds-WP_103159310.1;Parent=gene-RM588_RS05675;Dbxref=GenBank:WP_103159310.1;Name=WP_103159310.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=RM588_RS05675;product=phosphate acetyltransferase;protein_id=WP_103159310.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	449553	450389	.	+	.	ID=gene-RM588_RS05680;Name=RM588_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05680;old_locus_tag=RM588_05675
NZ_JAVRJR010000002.1	Protein Homology	CDS	449553	450389	.	+	0	ID=cds-WP_037572811.1;Parent=gene-RM588_RS05680;Dbxref=GenBank:WP_037572811.1;Name=WP_037572811.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728660.1;locus_tag=RM588_RS05680;product=lipoate--protein ligase family protein;protein_id=WP_037572811.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	450456	452204	.	-	.	ID=gene-RM588_RS05685;Name=RM588_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05685;old_locus_tag=RM588_05680
NZ_JAVRJR010000002.1	Protein Homology	CDS	450456	452204	.	-	0	ID=cds-WP_103159309.1;Parent=gene-RM588_RS05685;Dbxref=GenBank:WP_103159309.1;Name=WP_103159309.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167958.1;locus_tag=RM588_RS05685;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_103159309.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	452223	452870	.	-	.	ID=gene-RM588_RS05690;Name=RM588_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05690;old_locus_tag=RM588_05685
NZ_JAVRJR010000002.1	Protein Homology	CDS	452223	452870	.	-	0	ID=cds-WP_037572817.1;Parent=gene-RM588_RS05690;Dbxref=GenBank:WP_037572817.1;Name=WP_037572817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=RM588_RS05690;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_037572817.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	452996	453553	.	+	.	ID=gene-RM588_RS05695;Name=RM588_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05695;old_locus_tag=RM588_05690
NZ_JAVRJR010000002.1	Protein Homology	CDS	452996	453553	.	+	0	ID=cds-WP_037572819.1;Parent=gene-RM588_RS05695;Dbxref=GenBank:WP_037572819.1;Name=WP_037572819.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167960.1;locus_tag=RM588_RS05695;product=TetR/AcrR family transcriptional regulator;protein_id=WP_037572819.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	453820	454377	.	-	.	ID=gene-RM588_RS05700;Name=RM588_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05700;old_locus_tag=RM588_05695
NZ_JAVRJR010000002.1	Protein Homology	CDS	453820	454377	.	-	0	ID=cds-WP_037572822.1;Parent=gene-RM588_RS05700;Dbxref=GenBank:WP_037572822.1;Name=WP_037572822.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024812.7;locus_tag=RM588_RS05700;product=GNAT family N-acetyltransferase;protein_id=WP_037572822.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	454580	456031	.	-	.	ID=gene-RM588_RS05705;Name=RM588_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05705;old_locus_tag=RM588_05700
NZ_JAVRJR010000002.1	Protein Homology	CDS	454580	456031	.	-	0	ID=cds-WP_311548092.1;Parent=gene-RM588_RS05705;Dbxref=GenBank:WP_311548092.1;Name=WP_311548092.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499138.1;locus_tag=RM588_RS05705;product=APC family permease;protein_id=WP_311548092.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	456158	456520	.	-	.	ID=gene-RM588_RS05710;Name=RM588_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05710;old_locus_tag=RM588_05705
NZ_JAVRJR010000002.1	Protein Homology	CDS	456158	456520	.	-	0	ID=cds-WP_037572828.1;Parent=gene-RM588_RS05710;Dbxref=GenBank:WP_037572828.1;Name=WP_037572828.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424340.1;locus_tag=RM588_RS05710;product=DUF423 domain-containing protein;protein_id=WP_037572828.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	456537	456881	.	-	.	ID=gene-RM588_RS05715;Name=RM588_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05715;old_locus_tag=RM588_05710
NZ_JAVRJR010000002.1	Protein Homology	CDS	456537	456881	.	-	0	ID=cds-WP_103159306.1;Parent=gene-RM588_RS05715;Dbxref=GenBank:WP_103159306.1;Name=WP_103159306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219916.1;locus_tag=RM588_RS05715;product=DUF5327 family protein;protein_id=WP_103159306.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	456874	457542	.	-	.	ID=gene-RM588_RS05720;Name=RM588_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05720;old_locus_tag=RM588_05715
NZ_JAVRJR010000002.1	Protein Homology	CDS	456874	457542	.	-	0	ID=cds-WP_037572834.1;Parent=gene-RM588_RS05720;Dbxref=GenBank:WP_037572834.1;Name=WP_037572834.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168994.1;locus_tag=RM588_RS05720;product=uracil-DNA glycosylase;protein_id=WP_037572834.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	457674	458504	.	+	.	ID=gene-RM588_RS05725;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM588_RS05725;old_locus_tag=RM588_05720
NZ_JAVRJR010000002.1	Protein Homology	CDS	457674	458504	.	+	0	ID=cds-WP_311548093.1;Parent=gene-RM588_RS05725;Dbxref=GenBank:WP_311548093.1;Name=WP_311548093.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=RM588_RS05725;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_311548093.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	458764	459033	.	-	.	ID=gene-RM588_RS05730;Name=RM588_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05730;old_locus_tag=RM588_05725
NZ_JAVRJR010000002.1	Protein Homology	CDS	458764	459033	.	-	0	ID=cds-WP_311548094.1;Parent=gene-RM588_RS05730;Dbxref=GenBank:WP_311548094.1;Name=WP_311548094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276670.1;locus_tag=RM588_RS05730;product=hypothetical protein;protein_id=WP_311548094.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	459033	459389	.	-	.	ID=gene-RM588_RS05735;Name=RM588_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05735;old_locus_tag=RM588_05730
NZ_JAVRJR010000002.1	Protein Homology	CDS	459033	459389	.	-	0	ID=cds-WP_037572843.1;Parent=gene-RM588_RS05735;Dbxref=GenBank:WP_037572843.1;Name=WP_037572843.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055022.1;locus_tag=RM588_RS05735;product=VraC family protein;protein_id=WP_037572843.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	459358	460503	.	-	.	ID=gene-RM588_RS05740;Name=RM588_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05740;old_locus_tag=RM588_05735
NZ_JAVRJR010000002.1	Protein Homology	CDS	459358	460503	.	-	0	ID=cds-WP_107360538.1;Parent=gene-RM588_RS05740;Dbxref=GenBank:WP_107360538.1;Name=WP_107360538.1;Ontology_term=GO:0006635,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508455.1;locus_tag=RM588_RS05740;product=thiolase family protein;protein_id=WP_107360538.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	460496	461854	.	-	.	ID=gene-RM588_RS05745;Name=RM588_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05745;old_locus_tag=RM588_05740
NZ_JAVRJR010000002.1	Protein Homology	CDS	460496	461854	.	-	0	ID=cds-WP_234016926.1;Parent=gene-RM588_RS05745;Dbxref=GenBank:WP_234016926.1;Name=WP_234016926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165753.1;locus_tag=RM588_RS05745;product=AMP-binding protein;protein_id=WP_234016926.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	461989	462534	.	-	.	ID=gene-RM588_RS05750;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=RM588_RS05750;old_locus_tag=RM588_05745
NZ_JAVRJR010000002.1	Protein Homology	CDS	461989	462534	.	-	0	ID=cds-WP_311548095.1;Parent=gene-RM588_RS05750;Dbxref=GenBank:WP_311548095.1;Name=WP_311548095.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387319.1;locus_tag=RM588_RS05750;product=6-phospho-3-hexuloisomerase;protein_id=WP_311548095.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	462536	463174	.	-	.	ID=gene-RM588_RS05755;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=RM588_RS05755;old_locus_tag=RM588_05750
NZ_JAVRJR010000002.1	Protein Homology	CDS	462536	463174	.	-	0	ID=cds-WP_037572855.1;Parent=gene-RM588_RS05755;Dbxref=GenBank:WP_037572855.1;Name=WP_037572855.1;Ontology_term=GO:0005975,GO:0019649,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation|0019649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=RM588_RS05755;product=3-hexulose-6-phosphate synthase;protein_id=WP_037572855.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	463258	463986	.	-	.	ID=gene-RM588_RS05760;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=RM588_RS05760;old_locus_tag=RM588_05755
NZ_JAVRJR010000002.1	Protein Homology	CDS	463258	463986	.	-	0	ID=cds-WP_105962909.1;Parent=gene-RM588_RS05760;Dbxref=GenBank:WP_105962909.1;Name=WP_105962909.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441156.1;locus_tag=RM588_RS05760;product=glucosamine-6-phosphate deaminase;protein_id=WP_105962909.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	464223	464582	.	+	.	ID=gene-RM588_RS05765;Name=RM588_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05765;old_locus_tag=RM588_05760
NZ_JAVRJR010000002.1	Protein Homology	CDS	464223	464582	.	+	0	ID=cds-WP_037572861.1;Parent=gene-RM588_RS05765;Dbxref=GenBank:WP_037572861.1;Name=WP_037572861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001795843.1;locus_tag=RM588_RS05765;product=YojF family protein;protein_id=WP_037572861.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	464594	465283	.	+	.	ID=gene-RM588_RS05770;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=RM588_RS05770;old_locus_tag=RM588_05765
NZ_JAVRJR010000002.1	Protein Homology	CDS	464594	465283	.	+	0	ID=cds-WP_037572863.1;Parent=gene-RM588_RS05770;Dbxref=GenBank:WP_037572863.1;Name=WP_037572863.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455710.1;locus_tag=RM588_RS05770;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_037572863.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	465360	466238	.	+	.	ID=gene-RM588_RS05775;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=RM588_RS05775;old_locus_tag=RM588_05770
NZ_JAVRJR010000002.1	Protein Homology	CDS	465360	466238	.	+	0	ID=cds-WP_037572866.1;Parent=gene-RM588_RS05775;Dbxref=GenBank:WP_037572866.1;Name=WP_037572866.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=RM588_RS05775;product=GTP cyclohydrolase FolE2;protein_id=WP_037572866.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	466296	466862	.	-	.	ID=gene-RM588_RS05780;Name=RM588_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05780;old_locus_tag=RM588_05775
NZ_JAVRJR010000002.1	Protein Homology	CDS	466296	466862	.	-	0	ID=cds-WP_037572869.1;Parent=gene-RM588_RS05780;Dbxref=GenBank:WP_037572869.1;Name=WP_037572869.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464116.1;locus_tag=RM588_RS05780;product=NADPH-dependent FMN reductase;protein_id=WP_037572869.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	466877	467746	.	-	.	ID=gene-RM588_RS05785;Name=RM588_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05785;old_locus_tag=RM588_05780
NZ_JAVRJR010000002.1	Protein Homology	CDS	466877	467746	.	-	0	ID=cds-WP_107364113.1;Parent=gene-RM588_RS05785;Dbxref=GenBank:WP_107364113.1;Name=WP_107364113.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276687.1;locus_tag=RM588_RS05785;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_107364113.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	467914	468411	.	-	.	ID=gene-RM588_RS05790;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=RM588_RS05790;old_locus_tag=RM588_05785
NZ_JAVRJR010000002.1	Protein Homology	CDS	467914	468411	.	-	0	ID=cds-WP_037572877.1;Parent=gene-RM588_RS05790;Dbxref=GenBank:WP_037572877.1;Name=WP_037572877.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455718.1;locus_tag=RM588_RS05790;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_037572877.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	468479	469096	.	+	.	ID=gene-RM588_RS05795;Name=RM588_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05795;old_locus_tag=RM588_05790
NZ_JAVRJR010000002.1	Protein Homology	CDS	468479	469096	.	+	0	ID=cds-WP_103159298.1;Parent=gene-RM588_RS05795;Dbxref=GenBank:WP_103159298.1;Name=WP_103159298.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723522.1;locus_tag=RM588_RS05795;product=deoxynucleoside kinase;protein_id=WP_103159298.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	469089	469754	.	+	.	ID=gene-RM588_RS05800;Name=RM588_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05800;old_locus_tag=RM588_05795
NZ_JAVRJR010000002.1	Protein Homology	CDS	469089	469754	.	+	0	ID=cds-WP_103159297.1;Parent=gene-RM588_RS05800;Dbxref=GenBank:WP_103159297.1;Name=WP_103159297.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464122.1;locus_tag=RM588_RS05800;product=deoxynucleoside kinase;protein_id=WP_103159297.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	469791	470480	.	-	.	ID=gene-RM588_RS05805;Name=RM588_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05805;old_locus_tag=RM588_05800
NZ_JAVRJR010000002.1	Protein Homology	CDS	469791	470480	.	-	0	ID=cds-WP_105996652.1;Parent=gene-RM588_RS05805;Dbxref=GenBank:WP_105996652.1;Name=WP_105996652.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424315.1;locus_tag=RM588_RS05805;product=HAD family hydrolase;protein_id=WP_105996652.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	470868	471848	.	-	.	ID=gene-RM588_RS05810;Name=RM588_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05810;old_locus_tag=RM588_05805
NZ_JAVRJR010000002.1	Protein Homology	CDS	470868	471848	.	-	0	ID=cds-WP_105962906.1;Parent=gene-RM588_RS05810;Dbxref=GenBank:WP_105962906.1;Name=WP_105962906.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474518.1;locus_tag=RM588_RS05810;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_105962906.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	471935	473173	.	+	.	ID=gene-RM588_RS05815;Name=RM588_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05815;old_locus_tag=RM588_05810
NZ_JAVRJR010000002.1	Protein Homology	CDS	471935	473173	.	+	0	ID=cds-WP_311548096.1;Parent=gene-RM588_RS05815;Dbxref=GenBank:WP_311548096.1;Name=WP_311548096.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167715.1;locus_tag=RM588_RS05815;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_311548096.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	473170	473982	.	+	.	ID=gene-RM588_RS05820;Name=RM588_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05820;old_locus_tag=RM588_05815
NZ_JAVRJR010000002.1	Protein Homology	CDS	473170	473982	.	+	0	ID=cds-WP_311548097.1;Parent=gene-RM588_RS05820;Dbxref=GenBank:WP_311548097.1;Name=WP_311548097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167714.1;locus_tag=RM588_RS05820;product=HAD-IIB family hydrolase;protein_id=WP_311548097.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	473975	475018	.	+	.	ID=gene-RM588_RS05825;Name=RM588_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05825;old_locus_tag=RM588_05820
NZ_JAVRJR010000002.1	Protein Homology	CDS	473975	475018	.	+	0	ID=cds-WP_037572899.1;Parent=gene-RM588_RS05825;Dbxref=GenBank:WP_037572899.1;Name=WP_037572899.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474544.1;locus_tag=RM588_RS05825;product=Gfo/Idh/MocA family protein;protein_id=WP_037572899.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	475048	476133	.	+	.	ID=gene-RM588_RS05830;Name=RM588_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05830;old_locus_tag=RM588_05825
NZ_JAVRJR010000002.1	Protein Homology	CDS	475048	476133	.	+	0	ID=cds-WP_259336263.1;Parent=gene-RM588_RS05830;Dbxref=GenBank:WP_259336263.1;Name=WP_259336263.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424330.1;locus_tag=RM588_RS05830;product=MFS transporter;protein_id=WP_259336263.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	476483	477559	.	-	.	ID=gene-RM588_RS05835;Name=RM588_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05835;old_locus_tag=RM588_05830
NZ_JAVRJR010000002.1	Protein Homology	CDS	476483	477559	.	-	0	ID=cds-WP_037572903.1;Parent=gene-RM588_RS05835;Dbxref=GenBank:WP_037572903.1;Name=WP_037572903.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467887.1;locus_tag=RM588_RS05835;product=branched-chain amino acid aminotransferase;protein_id=WP_037572903.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	477830	478789	.	-	.	ID=gene-RM588_RS05840;Name=RM588_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05840;old_locus_tag=RM588_05835
NZ_JAVRJR010000002.1	Protein Homology	CDS	477830	478789	.	-	0	ID=cds-WP_037572906.1;Parent=gene-RM588_RS05840;Dbxref=GenBank:WP_037572906.1;Name=WP_037572906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614740.1;locus_tag=RM588_RS05840;product=L-threonine 3-dehydrogenase;protein_id=WP_037572906.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	479099	480289	.	-	.	ID=gene-RM588_RS05845;Name=RM588_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05845;old_locus_tag=RM588_05840
NZ_JAVRJR010000002.1	Protein Homology	CDS	479099	480289	.	-	0	ID=cds-WP_037572909.1;Parent=gene-RM588_RS05845;Dbxref=GenBank:WP_037572909.1;Name=WP_037572909.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479459.1;locus_tag=RM588_RS05845;product=glycine C-acetyltransferase;protein_id=WP_037572909.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	480398	481564	.	+	.	ID=gene-RM588_RS05850;Name=RM588_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05850;old_locus_tag=RM588_05845
NZ_JAVRJR010000002.1	Protein Homology	CDS	480398	481564	.	+	0	ID=cds-WP_037572912.1;Parent=gene-RM588_RS05850;Dbxref=GenBank:WP_037572912.1;Name=WP_037572912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383855.1;locus_tag=RM588_RS05850;product=M20 family metallopeptidase;protein_id=WP_037572912.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	482109	483296	.	-	.	ID=gene-RM588_RS05855;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=RM588_RS05855;old_locus_tag=RM588_05850
NZ_JAVRJR010000002.1	Protein Homology	CDS	482109	483296	.	-	0	ID=cds-WP_037572915.1;Parent=gene-RM588_RS05855;Dbxref=GenBank:WP_037572915.1;Name=WP_037572915.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=RM588_RS05855;product=elongation factor Tu;protein_id=WP_037572915.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	483487	485568	.	-	.	ID=gene-RM588_RS05860;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=RM588_RS05860;old_locus_tag=RM588_05855
NZ_JAVRJR010000002.1	Protein Homology	CDS	483487	485568	.	-	0	ID=cds-WP_037572918.1;Parent=gene-RM588_RS05860;Dbxref=GenBank:WP_037572918.1;Name=WP_037572918.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=RM588_RS05860;product=elongation factor G;protein_id=WP_037572918.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	485712	486182	.	-	.	ID=gene-RM588_RS05865;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=RM588_RS05865;old_locus_tag=RM588_05860
NZ_JAVRJR010000002.1	Protein Homology	CDS	485712	486182	.	-	0	ID=cds-WP_014614746.1;Parent=gene-RM588_RS05865;Dbxref=GenBank:WP_014614746.1;Name=WP_014614746.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=RM588_RS05865;product=30S ribosomal protein S7;protein_id=WP_014614746.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	486265	486678	.	-	.	ID=gene-RM588_RS05870;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=RM588_RS05870;old_locus_tag=RM588_05865
NZ_JAVRJR010000002.1	Protein Homology	CDS	486265	486678	.	-	0	ID=cds-WP_037572921.1;Parent=gene-RM588_RS05870;Dbxref=GenBank:WP_037572921.1;Name=WP_037572921.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508566.1;locus_tag=RM588_RS05870;product=30S ribosomal protein S12;protein_id=WP_037572921.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	486777	487031	.	-	.	ID=gene-RM588_RS05875;Name=RM588_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05875;old_locus_tag=RM588_05870
NZ_JAVRJR010000002.1	Protein Homology	CDS	486777	487031	.	-	0	ID=cds-WP_037572924.1;Parent=gene-RM588_RS05875;Dbxref=GenBank:WP_037572924.1;Name=WP_037572924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444636.1;locus_tag=RM588_RS05875;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_037572924.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	487169	490789	.	-	.	ID=gene-RM588_RS05880;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=RM588_RS05880;old_locus_tag=RM588_05875
NZ_JAVRJR010000002.1	Protein Homology	CDS	487169	490789	.	-	0	ID=cds-WP_105996651.1;Parent=gene-RM588_RS05880;Dbxref=GenBank:WP_105996651.1;Name=WP_105996651.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=RM588_RS05880;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_105996651.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	490932	494483	.	-	.	ID=gene-RM588_RS05885;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=RM588_RS05885;old_locus_tag=RM588_05880
NZ_JAVRJR010000002.1	Protein Homology	CDS	490932	494483	.	-	0	ID=cds-WP_037572930.1;Parent=gene-RM588_RS05885;Dbxref=GenBank:WP_037572930.1;Name=WP_037572930.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=RM588_RS05885;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_037572930.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	494695	495303	.	-	.	ID=gene-RM588_RS05890;Name=RM588_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05890;old_locus_tag=RM588_05885
NZ_JAVRJR010000002.1	Protein Homology	CDS	494695	495303	.	-	0	ID=cds-WP_105965086.1;Parent=gene-RM588_RS05890;Dbxref=GenBank:WP_105965086.1;Name=WP_105965086.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449036.1;locus_tag=RM588_RS05890;product=class I SAM-dependent methyltransferase;protein_id=WP_105965086.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	495385	495750	.	-	.	ID=gene-RM588_RS05895;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=RM588_RS05895;old_locus_tag=RM588_05890
NZ_JAVRJR010000002.1	Protein Homology	CDS	495385	495750	.	-	0	ID=cds-WP_037572937.1;Parent=gene-RM588_RS05895;Dbxref=GenBank:WP_037572937.1;Name=WP_037572937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=RM588_RS05895;product=50S ribosomal protein L7/L12;protein_id=WP_037572937.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	495805	496305	.	-	.	ID=gene-RM588_RS05900;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=RM588_RS05900;old_locus_tag=RM588_05895
NZ_JAVRJR010000002.1	Protein Homology	CDS	495805	496305	.	-	0	ID=cds-WP_037572940.1;Parent=gene-RM588_RS05900;Dbxref=GenBank:WP_037572940.1;Name=WP_037572940.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=RM588_RS05900;product=50S ribosomal protein L10;protein_id=WP_037572940.1;transl_table=11
NZ_JAVRJR010000002.1	cmsearch	sequence_feature	496351	496492	.	-	.	ID=id-NZ_JAVRJR010000002.1:496351..496492;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00557,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000002.1	RefSeq	gene	496608	497306	.	-	.	ID=gene-RM588_RS05905;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=RM588_RS05905;old_locus_tag=RM588_05900
NZ_JAVRJR010000002.1	Protein Homology	CDS	496608	497306	.	-	0	ID=cds-WP_037572943.1;Parent=gene-RM588_RS05905;Dbxref=GenBank:WP_037572943.1;Name=WP_037572943.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=RM588_RS05905;product=50S ribosomal protein L1;protein_id=WP_037572943.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	497512	497934	.	-	.	ID=gene-RM588_RS05910;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=RM588_RS05910;old_locus_tag=RM588_05905
NZ_JAVRJR010000002.1	Protein Homology	CDS	497512	497934	.	-	0	ID=cds-WP_037572949.1;Parent=gene-RM588_RS05910;Dbxref=GenBank:WP_037572949.1;Name=WP_037572949.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=RM588_RS05910;product=50S ribosomal protein L11;protein_id=WP_037572949.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	498476	499024	.	-	.	ID=gene-RM588_RS05915;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=RM588_RS05915;old_locus_tag=RM588_05910
NZ_JAVRJR010000002.1	Protein Homology	CDS	498476	499024	.	-	0	ID=cds-WP_037572959.1;Parent=gene-RM588_RS05915;Dbxref=GenBank:WP_037572959.1;Name=WP_037572959.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=RM588_RS05915;product=transcription termination/antitermination protein NusG;protein_id=WP_037572959.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	499043	499222	.	-	.	ID=gene-RM588_RS05920;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=RM588_RS05920;old_locus_tag=RM588_05915
NZ_JAVRJR010000002.1	Protein Homology	CDS	499043	499222	.	-	0	ID=cds-WP_037572962.1;Parent=gene-RM588_RS05920;Dbxref=GenBank:WP_037572962.1;Name=WP_037572962.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=RM588_RS05920;product=preprotein translocase subunit SecE;protein_id=WP_037572962.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	499309	499452	.	-	.	ID=gene-RM588_RS05925;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM588_RS05925;old_locus_tag=RM588_05920
NZ_JAVRJR010000002.1	Protein Homology	CDS	499309	499452	.	-	0	ID=cds-WP_105996650.1;Parent=gene-RM588_RS05925;Dbxref=GenBank:WP_105996650.1;Name=WP_105996650.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR01023.1;locus_tag=RM588_RS05925;product=50S ribosomal protein L33;protein_id=WP_105996650.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	499532	500116	.	-	.	ID=gene-RM588_RS05930;Name=RM588_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05930;old_locus_tag=RM588_05925
NZ_JAVRJR010000002.1	GeneMarkS-2+	CDS	499532	500116	.	-	0	ID=cds-WP_037572965.1;Parent=gene-RM588_RS05930;Dbxref=GenBank:WP_037572965.1;Name=WP_037572965.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS05930;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_037572965.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	500191	500715	.	-	.	ID=gene-RM588_RS05935;Name=RM588_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05935;old_locus_tag=RM588_05930
NZ_JAVRJR010000002.1	Protein Homology	CDS	500191	500715	.	-	0	ID=cds-WP_311548098.1;Parent=gene-RM588_RS05935;Dbxref=GenBank:WP_311548098.1;Name=WP_311548098.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499087.1;locus_tag=RM588_RS05935;product=NYN domain-containing protein;protein_id=WP_311548098.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	500712	501467	.	-	.	ID=gene-RM588_RS05940;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=RM588_RS05940;old_locus_tag=RM588_05935
NZ_JAVRJR010000002.1	Protein Homology	CDS	500712	501467	.	-	0	ID=cds-WP_311548099.1;Parent=gene-RM588_RS05940;Dbxref=GenBank:WP_311548099.1;Name=WP_311548099.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166681.1;locus_tag=RM588_RS05940;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_311548099.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	501474	501875	.	-	.	ID=gene-RM588_RS05945;Name=RM588_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05945;old_locus_tag=RM588_05940
NZ_JAVRJR010000002.1	Protein Homology	CDS	501474	501875	.	-	0	ID=cds-WP_037572975.1;Parent=gene-RM588_RS05945;Dbxref=GenBank:WP_037572975.1;Name=WP_037572975.1;Ontology_term=GO:0006364,GO:0004525,GO:0019843;gbkey=CDS;go_function=ribonuclease III activity|0004525||IEA,rRNA binding|0019843||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614762.1;locus_tag=RM588_RS05945;product=Mini-ribonuclease 3;protein_id=WP_037572975.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	501868	503268	.	-	.	ID=gene-RM588_RS05950;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=RM588_RS05950;old_locus_tag=RM588_05945
NZ_JAVRJR010000002.1	Protein Homology	CDS	501868	503268	.	-	0	ID=cds-WP_103158773.1;Parent=gene-RM588_RS05950;Dbxref=GenBank:WP_103158773.1;Name=WP_103158773.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=RM588_RS05950;product=cysteine--tRNA ligase;protein_id=WP_103158773.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	503252	503890	.	-	.	ID=gene-RM588_RS05955;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=RM588_RS05955;old_locus_tag=RM588_05950
NZ_JAVRJR010000002.1	Protein Homology	CDS	503252	503890	.	-	0	ID=cds-WP_258026740.1;Parent=gene-RM588_RS05955;Dbxref=GenBank:WP_258026740.1;Name=WP_258026740.1;Ontology_term=GO:0019344,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638459.1;locus_tag=RM588_RS05955;product=serine O-acetyltransferase;protein_id=WP_258026740.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	504218	505672	.	-	.	ID=gene-RM588_RS05960;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=RM588_RS05960;old_locus_tag=RM588_05955
NZ_JAVRJR010000002.1	Protein Homology	CDS	504218	505672	.	-	0	ID=cds-WP_037572983.1;Parent=gene-RM588_RS05960;Dbxref=GenBank:WP_037572983.1;Name=WP_037572983.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728607.1;locus_tag=RM588_RS05960;product=glutamate--tRNA ligase;protein_id=WP_037572983.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	505749	506228	.	-	.	ID=gene-RM588_RS05965;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=RM588_RS05965;old_locus_tag=RM588_05960
NZ_JAVRJR010000002.1	Protein Homology	CDS	505749	506228	.	-	0	ID=cds-WP_037572986.1;Parent=gene-RM588_RS05965;Dbxref=GenBank:WP_037572986.1;Name=WP_037572986.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911171.1;locus_tag=RM588_RS05965;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_037572986.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	506221	506919	.	-	.	ID=gene-RM588_RS05970;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=RM588_RS05970;old_locus_tag=RM588_05965
NZ_JAVRJR010000002.1	Protein Homology	CDS	506221	506919	.	-	0	ID=cds-WP_103158776.1;Parent=gene-RM588_RS05970;Dbxref=GenBank:WP_103158776.1;Name=WP_103158776.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166687.1;locus_tag=RM588_RS05970;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_103158776.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	506919	507983	.	-	.	ID=gene-RM588_RS05975;Name=RM588_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05975;old_locus_tag=RM588_05970
NZ_JAVRJR010000002.1	Protein Homology	CDS	506919	507983	.	-	0	ID=cds-WP_103158777.1;Parent=gene-RM588_RS05975;Dbxref=GenBank:WP_103158777.1;Name=WP_103158777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276734.1;locus_tag=RM588_RS05975;product=PIN/TRAM domain-containing protein;protein_id=WP_103158777.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	508000	509373	.	-	.	ID=gene-RM588_RS05980;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=RM588_RS05980;old_locus_tag=RM588_05975
NZ_JAVRJR010000002.1	Protein Homology	CDS	508000	509373	.	-	0	ID=cds-WP_037572997.1;Parent=gene-RM588_RS05980;Dbxref=GenBank:WP_037572997.1;Name=WP_037572997.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1;locus_tag=RM588_RS05980;product=DNA repair protein RadA;protein_id=WP_037572997.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	509500	511986	.	-	.	ID=gene-RM588_RS05985;Name=RM588_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05985;old_locus_tag=RM588_05980
NZ_JAVRJR010000002.1	Protein Homology	CDS	509500	511986	.	-	0	ID=cds-WP_103158779.1;Parent=gene-RM588_RS05985;Dbxref=GenBank:WP_103158779.1;Name=WP_103158779.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169089.1;locus_tag=RM588_RS05985;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_103158779.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	511999	513003	.	-	.	ID=gene-RM588_RS05990;Name=RM588_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05990;old_locus_tag=RM588_05985
NZ_JAVRJR010000002.1	Protein Homology	CDS	511999	513003	.	-	0	ID=cds-WP_105965079.1;Parent=gene-RM588_RS05990;Dbxref=GenBank:WP_105965079.1;Name=WP_105965079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424281.1;locus_tag=RM588_RS05990;product=protein arginine kinase;protein_id=WP_105965079.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	512987	513493	.	-	.	ID=gene-RM588_RS05995;Name=RM588_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS05995;old_locus_tag=RM588_05990
NZ_JAVRJR010000002.1	Protein Homology	CDS	512987	513493	.	-	0	ID=cds-WP_371874999.1;Parent=gene-RM588_RS05995;Dbxref=GenBank:WP_371874999.1;Name=WP_371874999.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424280.1;locus_tag=RM588_RS05995;product=UvrB/UvrC motif-containing protein;protein_id=WP_371874999.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	513538	513999	.	-	.	ID=gene-RM588_RS06000;Name=RM588_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06000;old_locus_tag=RM588_05995
NZ_JAVRJR010000002.1	Protein Homology	CDS	513538	513999	.	-	0	ID=cds-WP_103158780.1;Parent=gene-RM588_RS06000;Dbxref=GenBank:WP_103158780.1;Name=WP_103158780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=RM588_RS06000;product=CtsR family transcriptional regulator;protein_id=WP_103158780.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	514164	515369	.	+	.	ID=gene-RM588_RS06005;Name=RM588_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06005;old_locus_tag=RM588_06000
NZ_JAVRJR010000002.1	Protein Homology	CDS	514164	515369	.	+	0	ID=cds-WP_037573005.1;Parent=gene-RM588_RS06005;Dbxref=GenBank:WP_037573005.1;Name=WP_037573005.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=RM588_RS06005;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_037573005.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	515556	516116	.	-	.	ID=gene-RM588_RS06010;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=RM588_RS06010;old_locus_tag=RM588_06005
NZ_JAVRJR010000002.1	Protein Homology	CDS	515556	516116	.	-	0	ID=cds-WP_119505256.1;Parent=gene-RM588_RS06010;Dbxref=GenBank:WP_119505256.1;Name=WP_119505256.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499073.1;locus_tag=RM588_RS06010;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_119505256.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	516118	517005	.	-	.	ID=gene-RM588_RS06015;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=RM588_RS06015;old_locus_tag=RM588_06010
NZ_JAVRJR010000002.1	Protein Homology	CDS	516118	517005	.	-	0	ID=cds-WP_103158782.1;Parent=gene-RM588_RS06015;Dbxref=GenBank:WP_103158782.1;Name=WP_103158782.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=RM588_RS06015;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_103158782.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	517115	518530	.	+	.	ID=gene-RM588_RS06020;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=RM588_RS06020;old_locus_tag=RM588_06015
NZ_JAVRJR010000002.1	Protein Homology	CDS	517115	518530	.	+	0	ID=cds-WP_051604943.1;Parent=gene-RM588_RS06020;Dbxref=GenBank:WP_051604943.1;Name=WP_051604943.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911182.1;locus_tag=RM588_RS06020;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_051604943.1;transl_table=11
NZ_JAVRJR010000002.1	RefSeq	gene	518627	520570	.	-	.	ID=gene-RM588_RS06025;Name=RM588_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06025;old_locus_tag=RM588_06020
NZ_JAVRJR010000002.1	Protein Homology	CDS	518627	520570	.	-	0	ID=cds-WP_229717265.1;Parent=gene-RM588_RS06025;Dbxref=GenBank:WP_229717265.1;Name=WP_229717265.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728598.1;locus_tag=RM588_RS06025;product=FUSC family protein;protein_id=WP_229717265.1;transl_table=11
##sequence-region NZ_JAVRJR010000003.1 1 263679
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000003.1	RefSeq	region	1	263679	.	+	.	ID=NZ_JAVRJR010000003.1:1..263679;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000003.1	RefSeq	gene	1	434	.	-	.	ID=gene-RM588_RS06030;Name=RM588_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06030;old_locus_tag=RM588_06025;partial=true;start_range=.,1
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	1	434	.	-	0	ID=cds-WP_311540511.1;Parent=gene-RM588_RS06030;Dbxref=GenBank:WP_311540511.1;Name=WP_311540511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06030;partial=true;product=hypothetical protein;protein_id=WP_311540511.1;start_range=.,1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	376	8943	.	+	.	ID=gene-RM588_RS06035;Name=RM588_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06035;old_locus_tag=RM588_06030
NZ_JAVRJR010000003.1	Protein Homology	CDS	376	8943	.	+	0	ID=cds-WP_311548101.1;Parent=gene-RM588_RS06035;Dbxref=GenBank:WP_311548101.1;Name=WP_311548101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492968.1;locus_tag=RM588_RS06035;product=Rib/alpha-like domain-containing protein;protein_id=WP_311548101.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	9088	10218	.	-	.	ID=gene-RM588_RS06040;Name=RM588_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06040;old_locus_tag=RM588_06035
NZ_JAVRJR010000003.1	Protein Homology	CDS	9088	10218	.	-	0	ID=cds-WP_037577339.1;Parent=gene-RM588_RS06040;Dbxref=GenBank:WP_037577339.1;Name=WP_037577339.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426134.1;locus_tag=RM588_RS06040;product=PucR family transcriptional regulator;protein_id=WP_037577339.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	10620	15599	.	+	.	ID=gene-RM588_RS06045;Name=RM588_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06045;old_locus_tag=RM588_06040
NZ_JAVRJR010000003.1	Protein Homology	CDS	10620	15599	.	+	0	ID=cds-WP_311548102.1;Parent=gene-RM588_RS06045;Dbxref=GenBank:WP_311548102.1;Name=WP_311548102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.7;locus_tag=RM588_RS06045;product=Ig-like domain-containing protein;protein_id=WP_311548102.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	15827	17467	.	+	.	ID=gene-RM588_RS06050;Name=RM588_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06050;old_locus_tag=RM588_06045
NZ_JAVRJR010000003.1	Protein Homology	CDS	15827	17467	.	+	0	ID=cds-WP_311540288.1;Parent=gene-RM588_RS06050;Dbxref=GenBank:WP_311540288.1;Name=WP_311540288.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813558.1;locus_tag=RM588_RS06050;product=alpha-keto acid decarboxylase family protein;protein_id=WP_311540288.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	17948	19351	.	+	.	ID=gene-RM588_RS06055;Name=RM588_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06055;old_locus_tag=RM588_06050
NZ_JAVRJR010000003.1	Protein Homology	CDS	17948	19351	.	+	0	ID=cds-WP_311540289.1;Parent=gene-RM588_RS06055;Dbxref=GenBank:WP_311540289.1;Name=WP_311540289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612985.1;locus_tag=RM588_RS06055;product=anthranilate synthase component I;protein_id=WP_311540289.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	19348	19929	.	+	.	ID=gene-RM588_RS06060;Name=RM588_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06060;old_locus_tag=RM588_06055
NZ_JAVRJR010000003.1	Protein Homology	CDS	19348	19929	.	+	0	ID=cds-WP_037575234.1;Parent=gene-RM588_RS06060;Dbxref=GenBank:WP_037575234.1;Name=WP_037575234.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729628.1;locus_tag=RM588_RS06060;product=anthranilate synthase component II;protein_id=WP_037575234.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	19916	20932	.	+	.	ID=gene-RM588_RS06065;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=RM588_RS06065;old_locus_tag=RM588_06060
NZ_JAVRJR010000003.1	Protein Homology	CDS	19916	20932	.	+	0	ID=cds-WP_037575232.1;Parent=gene-RM588_RS06065;Dbxref=GenBank:WP_037575232.1;Name=WP_037575232.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275831.1;locus_tag=RM588_RS06065;product=anthranilate phosphoribosyltransferase;protein_id=WP_037575232.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	20916	21692	.	+	.	ID=gene-RM588_RS06070;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=RM588_RS06070;old_locus_tag=RM588_06065
NZ_JAVRJR010000003.1	Protein Homology	CDS	20916	21692	.	+	0	ID=cds-WP_311540290.1;Parent=gene-RM588_RS06070;Dbxref=GenBank:WP_311540290.1;Name=WP_311540290.1;Ontology_term=GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433850.1;locus_tag=RM588_RS06070;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_311540290.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	21698	22327	.	+	.	ID=gene-RM588_RS06075;Name=RM588_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06075;old_locus_tag=RM588_06070
NZ_JAVRJR010000003.1	Protein Homology	CDS	21698	22327	.	+	0	ID=cds-WP_037575227.1;Parent=gene-RM588_RS06075;Dbxref=GenBank:WP_037575227.1;Name=WP_037575227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729626.1;locus_tag=RM588_RS06075;product=phosphoribosylanthranilate isomerase;protein_id=WP_037575227.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	22324	23538	.	+	.	ID=gene-RM588_RS06080;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=RM588_RS06080;old_locus_tag=RM588_06075
NZ_JAVRJR010000003.1	Protein Homology	CDS	22324	23538	.	+	0	ID=cds-WP_037575225.1;Parent=gene-RM588_RS06080;Dbxref=GenBank:WP_037575225.1;Name=WP_037575225.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507663.1;locus_tag=RM588_RS06080;product=tryptophan synthase subunit beta;protein_id=WP_037575225.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	23531	24268	.	+	.	ID=gene-RM588_RS06085;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=RM588_RS06085;old_locus_tag=RM588_06080
NZ_JAVRJR010000003.1	Protein Homology	CDS	23531	24268	.	+	0	ID=cds-WP_107378534.1;Parent=gene-RM588_RS06085;Dbxref=GenBank:WP_107378534.1;Name=WP_107378534.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383990.1;locus_tag=RM588_RS06085;product=tryptophan synthase subunit alpha;protein_id=WP_107378534.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	24430	25137	.	+	.	ID=gene-RM588_RS06090;Name=RM588_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06090;old_locus_tag=RM588_06085
NZ_JAVRJR010000003.1	Protein Homology	CDS	24430	25137	.	+	0	ID=cds-WP_105963232.1;Parent=gene-RM588_RS06090;Dbxref=GenBank:WP_105963232.1;Name=WP_105963232.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165917.1;locus_tag=RM588_RS06090;product=HAD family hydrolase;protein_id=WP_105963232.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	25613	26041	.	-	.	ID=gene-RM588_RS06095;Name=RM588_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06095;old_locus_tag=RM588_06090
NZ_JAVRJR010000003.1	Protein Homology	CDS	25613	26041	.	-	0	ID=cds-WP_311540291.1;Parent=gene-RM588_RS06095;Dbxref=GenBank:WP_311540291.1;Name=WP_311540291.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729623.1;locus_tag=RM588_RS06095;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_311540291.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	26243	26848	.	-	.	ID=gene-RM588_RS06100;Name=RM588_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06100;old_locus_tag=RM588_06095
NZ_JAVRJR010000003.1	Protein Homology	CDS	26243	26848	.	-	0	ID=cds-WP_037575216.1;Parent=gene-RM588_RS06100;Dbxref=GenBank:WP_037575216.1;Name=WP_037575216.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.7;locus_tag=RM588_RS06100;product=GNAT family N-acetyltransferase;protein_id=WP_037575216.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	27000	28778	.	+	.	ID=gene-RM588_RS06105;Name=RM588_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06105;old_locus_tag=RM588_06100
NZ_JAVRJR010000003.1	Protein Homology	CDS	27000	28778	.	+	0	ID=cds-WP_103158679.1;Parent=gene-RM588_RS06105;Dbxref=GenBank:WP_103158679.1;Name=WP_103158679.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020008593.1;locus_tag=RM588_RS06105;product=ABC transporter ATP-binding protein;protein_id=WP_103158679.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	28775	30559	.	+	.	ID=gene-RM588_RS06110;Name=RM588_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06110;old_locus_tag=RM588_06105
NZ_JAVRJR010000003.1	Protein Homology	CDS	28775	30559	.	+	0	ID=cds-WP_311548103.1;Parent=gene-RM588_RS06110;Dbxref=GenBank:WP_311548103.1;Name=WP_311548103.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548609.1;locus_tag=RM588_RS06110;product=ABC transporter ATP-binding protein;protein_id=WP_311548103.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	30656	31399	.	-	.	ID=gene-RM588_RS06115;Name=RM588_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06115;old_locus_tag=RM588_06110
NZ_JAVRJR010000003.1	Protein Homology	CDS	30656	31399	.	-	0	ID=cds-WP_311540293.1;Parent=gene-RM588_RS06115;Dbxref=GenBank:WP_311540293.1;Name=WP_311540293.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF019359.7;locus_tag=RM588_RS06115;product=MerR family transcriptional regulator;protein_id=WP_311540293.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	31524	31895	.	-	.	ID=gene-RM588_RS06120;Name=RM588_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06120;old_locus_tag=RM588_06115
NZ_JAVRJR010000003.1	Protein Homology	CDS	31524	31895	.	-	0	ID=cds-WP_037575204.1;Parent=gene-RM588_RS06120;Dbxref=GenBank:WP_037575204.1;Name=WP_037575204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166343.1;locus_tag=RM588_RS06120;product=VOC family protein;protein_id=WP_037575204.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	31944	32372	.	-	.	ID=gene-RM588_RS06125;Name=RM588_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06125;old_locus_tag=RM588_06120
NZ_JAVRJR010000003.1	Protein Homology	CDS	31944	32372	.	-	0	ID=cds-WP_105986192.1;Parent=gene-RM588_RS06125;Dbxref=GenBank:WP_105986192.1;Name=WP_105986192.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613000.1;locus_tag=RM588_RS06125;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_105986192.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	32812	34203	.	-	.	ID=gene-RM588_RS06130;Name=RM588_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06130;old_locus_tag=RM588_06125
NZ_JAVRJR010000003.1	Protein Homology	CDS	32812	34203	.	-	0	ID=cds-WP_037575198.1;Parent=gene-RM588_RS06130;Dbxref=GenBank:WP_037575198.1;Name=WP_037575198.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017548016.1;locus_tag=RM588_RS06130;product=alanine/glycine:cation symporter family protein;protein_id=WP_037575198.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	34611	36569	.	-	.	ID=gene-RM588_RS06135;Name=RM588_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06135;old_locus_tag=RM588_06130
NZ_JAVRJR010000003.1	Protein Homology	CDS	34611	36569	.	-	0	ID=cds-WP_105963226.1;Parent=gene-RM588_RS06135;Dbxref=GenBank:WP_105963226.1;Name=WP_105963226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426154.1;locus_tag=RM588_RS06135;product=fructose-1%2C6-bisphosphatase;protein_id=WP_105963226.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	36835	38028	.	+	.	ID=gene-RM588_RS06140;Name=RM588_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06140;old_locus_tag=RM588_06135
NZ_JAVRJR010000003.1	Protein Homology	CDS	36835	38028	.	+	0	ID=cds-WP_311540294.1;Parent=gene-RM588_RS06140;Dbxref=GenBank:WP_311540294.1;Name=WP_311540294.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426155.1;locus_tag=RM588_RS06140;product=MFS transporter;protein_id=WP_311540294.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	38249	39535	.	+	.	ID=gene-RM588_RS06145;Name=RM588_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06145;old_locus_tag=RM588_06140
NZ_JAVRJR010000003.1	Protein Homology	CDS	38249	39535	.	+	0	ID=cds-WP_107366337.1;Parent=gene-RM588_RS06145;Dbxref=GenBank:WP_107366337.1;Name=WP_107366337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432812.1;locus_tag=RM588_RS06145;product=pyruvate MFS transporter;protein_id=WP_107366337.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	40006	40605	.	+	.	ID=gene-RM588_RS06150;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=RM588_RS06150;old_locus_tag=RM588_06145
NZ_JAVRJR010000003.1	Protein Homology	CDS	40006	40605	.	+	0	ID=cds-WP_037575184.1;Parent=gene-RM588_RS06150;Dbxref=GenBank:WP_037575184.1;Name=WP_037575184.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382165.1;locus_tag=RM588_RS06150;product=class A sortase SrtA;protein_id=WP_037575184.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	40684	41823	.	+	.	ID=gene-RM588_RS06155;Name=RM588_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06155;old_locus_tag=RM588_06150
NZ_JAVRJR010000003.1	Protein Homology	CDS	40684	41823	.	+	0	ID=cds-WP_375713814.1;Parent=gene-RM588_RS06155;Dbxref=GenBank:WP_375713814.1;Name=WP_375713814.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501186.1;locus_tag=RM588_RS06155;product=glycerate kinase family protein;protein_id=WP_375713814.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	41891	42580	.	-	.	ID=gene-RM588_RS06160;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=RM588_RS06160;old_locus_tag=RM588_06155
NZ_JAVRJR010000003.1	Protein Homology	CDS	41891	42580	.	-	0	ID=cds-WP_037575178.1;Parent=gene-RM588_RS06160;Dbxref=GenBank:WP_037575178.1;Name=WP_037575178.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899613.1;locus_tag=RM588_RS06160;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_037575178.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	42915	44006	.	+	.	ID=gene-RM588_RS06165;Name=RM588_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06165;old_locus_tag=RM588_06160
NZ_JAVRJR010000003.1	Protein Homology	CDS	42915	44006	.	+	0	ID=cds-WP_311540295.1;Parent=gene-RM588_RS06165;Dbxref=GenBank:WP_311540295.1;Name=WP_311540295.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382232.1;locus_tag=RM588_RS06165;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_311540295.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	44227	45300	.	+	.	ID=gene-RM588_RS06170;Name=RM588_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06170;old_locus_tag=RM588_06165
NZ_JAVRJR010000003.1	Protein Homology	CDS	44227	45300	.	+	0	ID=cds-WP_103158672.1;Parent=gene-RM588_RS06170;Dbxref=GenBank:WP_103158672.1;Name=WP_103158672.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169533.1;locus_tag=RM588_RS06170;product=PTS sugar transporter subunit IIC;protein_id=WP_103158672.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	45677	46441	.	-	.	ID=gene-RM588_RS06175;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=RM588_RS06175;old_locus_tag=RM588_06170
NZ_JAVRJR010000003.1	Protein Homology	CDS	45677	46441	.	-	0	ID=cds-WP_037575170.1;Parent=gene-RM588_RS06175;Dbxref=GenBank:WP_037575170.1;Name=WP_037575170.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169535.1;locus_tag=RM588_RS06175;product=pyruvate formate-lyase-activating protein;protein_id=WP_037575170.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	46481	48730	.	-	.	ID=gene-RM588_RS06180;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=RM588_RS06180;old_locus_tag=RM588_06175
NZ_JAVRJR010000003.1	Protein Homology	CDS	46481	48730	.	-	0	ID=cds-WP_103158671.1;Parent=gene-RM588_RS06180;Dbxref=GenBank:WP_103158671.1;Name=WP_103158671.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485526.1;locus_tag=RM588_RS06180;product=formate C-acetyltransferase;protein_id=WP_103158671.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	49066	49731	.	+	.	ID=gene-RM588_RS06185;Name=RM588_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06185;old_locus_tag=RM588_06180
NZ_JAVRJR010000003.1	Protein Homology	CDS	49066	49731	.	+	0	ID=cds-WP_037575163.1;Parent=gene-RM588_RS06185;Dbxref=GenBank:WP_037575163.1;Name=WP_037575163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465343.1;locus_tag=RM588_RS06185;product=SDR family oxidoreductase;protein_id=WP_037575163.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	50014	51147	.	+	.	ID=gene-RM588_RS06190;Name=RM588_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06190;old_locus_tag=RM588_06185
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	50014	51147	.	+	0	ID=cds-WP_103158670.1;Parent=gene-RM588_RS06190;Dbxref=GenBank:WP_103158670.1;Name=WP_103158670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06190;product=Rho termination factor N-terminal domain-containing protein;protein_id=WP_103158670.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	51211	52617	.	-	.	ID=gene-RM588_RS06195;Name=RM588_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06195;old_locus_tag=RM588_06190
NZ_JAVRJR010000003.1	Protein Homology	CDS	51211	52617	.	-	0	ID=cds-WP_103158669.1;Parent=gene-RM588_RS06195;Dbxref=GenBank:WP_103158669.1;Name=WP_103158669.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006639679.1;locus_tag=RM588_RS06195;product=PTS transporter subunit IIC;protein_id=WP_103158669.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	52643	52945	.	-	.	ID=gene-RM588_RS06200;Name=RM588_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06200;old_locus_tag=RM588_06195
NZ_JAVRJR010000003.1	Protein Homology	CDS	52643	52945	.	-	0	ID=cds-WP_037575156.1;Parent=gene-RM588_RS06200;Dbxref=GenBank:WP_037575156.1;Name=WP_037575156.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018662696.1;locus_tag=RM588_RS06200;product=PTS sugar transporter subunit IIB;protein_id=WP_037575156.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	52965	53438	.	-	.	ID=gene-RM588_RS06205;Name=RM588_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06205;old_locus_tag=RM588_06200
NZ_JAVRJR010000003.1	Protein Homology	CDS	52965	53438	.	-	0	ID=cds-WP_037575154.1;Parent=gene-RM588_RS06205;Dbxref=GenBank:WP_037575154.1;Name=WP_037575154.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM588_RS06205;product=PTS sugar transporter subunit IIA;protein_id=WP_037575154.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	53657	53944	.	+	.	ID=gene-RM588_RS06210;Name=RM588_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06210;old_locus_tag=RM588_06205
NZ_JAVRJR010000003.1	Protein Homology	CDS	53657	53944	.	+	0	ID=cds-WP_133170497.1;Parent=gene-RM588_RS06210;Dbxref=GenBank:WP_133170497.1;Name=WP_133170497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166516.1;locus_tag=RM588_RS06210;product=hypothetical protein;protein_id=WP_133170497.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	54002	54901	.	-	.	ID=gene-RM588_RS06215;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM588_RS06215;old_locus_tag=RM588_06210
NZ_JAVRJR010000003.1	Protein Homology	CDS	54002	54901	.	-	0	ID=cds-WP_037575152.1;Parent=gene-RM588_RS06215;Dbxref=GenBank:WP_037575152.1;Name=WP_037575152.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166517.1;locus_tag=RM588_RS06215;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_037575152.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	54917	55594	.	-	.	ID=gene-RM588_RS06220;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM588_RS06220;old_locus_tag=RM588_06215
NZ_JAVRJR010000003.1	Protein Homology	CDS	54917	55594	.	-	0	ID=cds-WP_103158668.1;Parent=gene-RM588_RS06220;Dbxref=GenBank:WP_103158668.1;Name=WP_103158668.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384715.1;locus_tag=RM588_RS06220;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_103158668.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	55609	56640	.	-	.	ID=gene-RM588_RS06225;Name=RM588_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06225;old_locus_tag=RM588_06220
NZ_JAVRJR010000003.1	Protein Homology	CDS	55609	56640	.	-	0	ID=cds-WP_037575148.1;Parent=gene-RM588_RS06225;Dbxref=GenBank:WP_037575148.1;Name=WP_037575148.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166519.1;locus_tag=RM588_RS06225;product=PTS sugar transporter subunit IIC;protein_id=WP_037575148.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	57044	57865	.	+	.	ID=gene-RM588_RS06230;Name=RM588_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06230;old_locus_tag=RM588_06225
NZ_JAVRJR010000003.1	Protein Homology	CDS	57044	57865	.	+	0	ID=cds-WP_311548104.1;Parent=gene-RM588_RS06230;Dbxref=GenBank:WP_311548104.1;Name=WP_311548104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166521.1;locus_tag=RM588_RS06230;product=putative phosphoesterase;protein_id=WP_311548104.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	57899	59386	.	-	.	ID=gene-RM588_RS06235;Name=RM588_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06235;old_locus_tag=RM588_06230
NZ_JAVRJR010000003.1	Protein Homology	CDS	57899	59386	.	-	0	ID=cds-WP_311548105.1;Parent=gene-RM588_RS06235;Dbxref=GenBank:WP_311548105.1;Name=WP_311548105.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837455.1;locus_tag=RM588_RS06235;product=aldehyde dehydrogenase family protein;protein_id=WP_311548105.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	60218	61228	.	+	.	ID=gene-RM588_RS06240;Name=RM588_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06240;old_locus_tag=RM588_06235
NZ_JAVRJR010000003.1	Protein Homology	CDS	60218	61228	.	+	0	ID=cds-WP_103158665.1;Parent=gene-RM588_RS06240;Dbxref=GenBank:WP_103158665.1;Name=WP_103158665.1;Ontology_term=GO:0008643,GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469115.1;locus_tag=RM588_RS06240;product=PTS sugar transporter subunit IIC;protein_id=WP_103158665.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	61257	62015	.	+	.	ID=gene-RM588_RS06245;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=RM588_RS06245;old_locus_tag=RM588_06240
NZ_JAVRJR010000003.1	Protein Homology	CDS	61257	62015	.	+	0	ID=cds-WP_037575136.1;Parent=gene-RM588_RS06245;Dbxref=GenBank:WP_037575136.1;Name=WP_037575136.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012657353.1;locus_tag=RM588_RS06245;product=nicotinamide riboside transporter PnuC;protein_id=WP_037575136.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	62139	63665	.	+	.	ID=gene-RM588_RS06250;Name=RM588_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06250;old_locus_tag=RM588_06245
NZ_JAVRJR010000003.1	Protein Homology	CDS	62139	63665	.	+	0	ID=cds-WP_311548106.1;Parent=gene-RM588_RS06250;Dbxref=GenBank:WP_311548106.1;Name=WP_311548106.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511671.1;locus_tag=RM588_RS06250;product=SLC13 family permease;protein_id=WP_311548106.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	63847	64026	.	+	.	ID=gene-RM588_RS06255;Name=RM588_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06255;old_locus_tag=RM588_06250
NZ_JAVRJR010000003.1	Protein Homology	CDS	63847	64026	.	+	0	ID=cds-WP_037575130.1;Parent=gene-RM588_RS06255;Dbxref=GenBank:WP_037575130.1;Name=WP_037575130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384095.1;locus_tag=RM588_RS06255;product=hypothetical protein;protein_id=WP_037575130.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	64298	65116	.	+	.	ID=gene-RM588_RS06260;Name=RM588_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06260;old_locus_tag=RM588_06255
NZ_JAVRJR010000003.1	Protein Homology	CDS	64298	65116	.	+	0	ID=cds-WP_037575127.1;Parent=gene-RM588_RS06260;Dbxref=GenBank:WP_037575127.1;Name=WP_037575127.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384094.1;locus_tag=RM588_RS06260;product=formate/nitrite transporter family protein;protein_id=WP_037575127.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	65213	65761	.	+	.	ID=gene-RM588_RS06265;Name=RM588_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06265;old_locus_tag=RM588_06260
NZ_JAVRJR010000003.1	Protein Homology	CDS	65213	65761	.	+	0	ID=cds-WP_105996833.1;Parent=gene-RM588_RS06265;Dbxref=GenBank:WP_105996833.1;Name=WP_105996833.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166527.1;locus_tag=RM588_RS06265;product=GNAT family N-acetyltransferase;protein_id=WP_105996833.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	65884	66630	.	+	.	ID=gene-RM588_RS06270;Name=RM588_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06270;old_locus_tag=RM588_06265
NZ_JAVRJR010000003.1	Protein Homology	CDS	65884	66630	.	+	0	ID=cds-WP_105996832.1;Parent=gene-RM588_RS06270;Dbxref=GenBank:WP_105996832.1;Name=WP_105996832.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219495.1;locus_tag=RM588_RS06270;product=sirohydrochlorin chelatase;protein_id=WP_105996832.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	66605	67066	.	+	.	ID=gene-RM588_RS06275;Name=RM588_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06275;old_locus_tag=RM588_06270
NZ_JAVRJR010000003.1	Protein Homology	CDS	66605	67066	.	+	0	ID=cds-WP_105965479.1;Parent=gene-RM588_RS06275;Dbxref=GenBank:WP_105965479.1;Name=WP_105965479.1;Ontology_term=GO:0019354,GO:0004325,GO:0043115,GO:0051287;gbkey=CDS;go_function=protoporphyrin ferrochelatase activity|0004325||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166529.1;locus_tag=RM588_RS06275;product=precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase family protein;protein_id=WP_105965479.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	67059	69464	.	+	.	ID=gene-RM588_RS06280;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=RM588_RS06280;old_locus_tag=RM588_06275
NZ_JAVRJR010000003.1	Protein Homology	CDS	67059	69464	.	+	0	ID=cds-WP_105963214.1;Parent=gene-RM588_RS06280;Dbxref=GenBank:WP_105963214.1;Name=WP_105963214.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=RM588_RS06280;product=nitrite reductase large subunit NirB;protein_id=WP_105963214.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	69467	69784	.	+	.	ID=gene-RM588_RS06285;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=RM588_RS06285;old_locus_tag=RM588_06280
NZ_JAVRJR010000003.1	Protein Homology	CDS	69467	69784	.	+	0	ID=cds-WP_037575111.1;Parent=gene-RM588_RS06285;Dbxref=GenBank:WP_037575111.1;Name=WP_037575111.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613044.1;locus_tag=RM588_RS06285;product=nitrite reductase small subunit NirD;protein_id=WP_037575111.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	69775	70701	.	+	.	ID=gene-RM588_RS06290;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM588_RS06290;old_locus_tag=RM588_06285
NZ_JAVRJR010000003.1	Protein Homology	CDS	69775	70701	.	+	0	ID=cds-WP_107372029.1;Parent=gene-RM588_RS06290;Dbxref=GenBank:WP_107372029.1;Name=WP_107372029.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169215.1;locus_tag=RM588_RS06290;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_107372029.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	pseudogene	70854	73353	.	+	.	ID=gene-RM588_RS11410;Name=RM588_RS11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11410;pseudo=true
NZ_JAVRJR010000003.1	Protein Homology	CDS	70854	73353	.	+	0	ID=cds-RM588_RS11410;Parent=gene-RM588_RS11410;Note=frameshifted;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729601.1;locus_tag=RM588_RS11410;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	73653	77324	.	+	.	ID=gene-RM588_RS06305;Name=RM588_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06305;old_locus_tag=RM588_06300
NZ_JAVRJR010000003.1	Protein Homology	CDS	73653	77324	.	+	0	ID=cds-WP_103158660.1;Parent=gene-RM588_RS06305;Dbxref=GenBank:WP_103158660.1;Name=WP_103158660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=RM588_RS06305;product=nitrate reductase subunit alpha;protein_id=WP_103158660.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	77314	78870	.	+	.	ID=gene-RM588_RS06310;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=RM588_RS06310;old_locus_tag=RM588_06305
NZ_JAVRJR010000003.1	Protein Homology	CDS	77314	78870	.	+	0	ID=cds-WP_037575102.1;Parent=gene-RM588_RS06310;Dbxref=GenBank:WP_037575102.1;Name=WP_037575102.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=RM588_RS06310;product=nitrate reductase subunit beta;protein_id=WP_037575102.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	78863	79438	.	+	.	ID=gene-RM588_RS06315;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=RM588_RS06315;old_locus_tag=RM588_06310
NZ_JAVRJR010000003.1	Protein Homology	CDS	78863	79438	.	+	0	ID=cds-WP_037575099.1;Parent=gene-RM588_RS06315;Dbxref=GenBank:WP_037575099.1;Name=WP_037575099.1;Ontology_term=GO:0051131;gbkey=CDS;gene=narJ;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613055.1;locus_tag=RM588_RS06315;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_037575099.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	79431	80108	.	+	.	ID=gene-RM588_RS06320;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=RM588_RS06320;old_locus_tag=RM588_06315
NZ_JAVRJR010000003.1	Protein Homology	CDS	79431	80108	.	+	0	ID=cds-WP_037575096.1;Parent=gene-RM588_RS06320;Dbxref=GenBank:WP_037575096.1;Name=WP_037575096.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501140.1;locus_tag=RM588_RS06320;product=respiratory nitrate reductase subunit gamma;protein_id=WP_037575096.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	80125	80586	.	+	.	ID=gene-RM588_RS06325;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=RM588_RS06325;old_locus_tag=RM588_06320
NZ_JAVRJR010000003.1	Protein Homology	CDS	80125	80586	.	+	0	ID=cds-WP_037575092.1;Parent=gene-RM588_RS06325;Dbxref=GenBank:WP_037575092.1;Name=WP_037575092.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426196.1;locus_tag=RM588_RS06325;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_037575092.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	80586	81629	.	+	.	ID=gene-RM588_RS06330;Name=RM588_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06330;old_locus_tag=RM588_06325
NZ_JAVRJR010000003.1	Protein Homology	CDS	80586	81629	.	+	0	ID=cds-WP_037575089.1;Parent=gene-RM588_RS06330;Dbxref=GenBank:WP_037575089.1;Name=WP_037575089.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501138.1;locus_tag=RM588_RS06330;product=sensor histidine kinase;protein_id=WP_037575089.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	81647	82297	.	+	.	ID=gene-RM588_RS06335;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=RM588_RS06335;old_locus_tag=RM588_06330
NZ_JAVRJR010000003.1	Protein Homology	CDS	81647	82297	.	+	0	ID=cds-WP_103158659.1;Parent=gene-RM588_RS06335;Dbxref=GenBank:WP_103158659.1;Name=WP_103158659.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=RM588_RS06335;product=nitrate respiration regulation response regulator NreC;protein_id=WP_103158659.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	82571	83734	.	+	.	ID=gene-RM588_RS06340;Name=RM588_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06340;old_locus_tag=RM588_06335
NZ_JAVRJR010000003.1	Protein Homology	CDS	82571	83734	.	+	0	ID=cds-WP_037575083.1;Parent=gene-RM588_RS06340;Dbxref=GenBank:WP_037575083.1;Name=WP_037575083.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501133.1;locus_tag=RM588_RS06340;product=nitrate/nitrite transporter;protein_id=WP_037575083.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	83789	85390	.	-	.	ID=gene-RM588_RS06345;Name=RM588_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06345;old_locus_tag=RM588_06340
NZ_JAVRJR010000003.1	Protein Homology	CDS	83789	85390	.	-	0	ID=cds-WP_105963209.1;Parent=gene-RM588_RS06345;Dbxref=GenBank:WP_105963209.1;Name=WP_105963209.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999617.1;locus_tag=RM588_RS06345;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_105963209.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	85580	85936	.	+	.	ID=gene-RM588_RS06350;Name=RM588_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06350;old_locus_tag=RM588_06345
NZ_JAVRJR010000003.1	Protein Homology	CDS	85580	85936	.	+	0	ID=cds-WP_037575076.1;Parent=gene-RM588_RS06350;Dbxref=GenBank:WP_037575076.1;Name=WP_037575076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613066.1;locus_tag=RM588_RS06350;product=DUF3139 domain-containing protein;protein_id=WP_037575076.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	86098	87171	.	+	.	ID=gene-RM588_RS06355;Name=RM588_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06355;old_locus_tag=RM588_06350
NZ_JAVRJR010000003.1	Protein Homology	CDS	86098	87171	.	+	0	ID=cds-WP_107366096.1;Parent=gene-RM588_RS06355;Dbxref=GenBank:WP_107366096.1;Name=WP_107366096.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613068.1;locus_tag=RM588_RS06355;product=M42 family metallopeptidase;protein_id=WP_107366096.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	87327	88229	.	+	.	ID=gene-RM588_RS06360;Name=RM588_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06360;old_locus_tag=RM588_06355
NZ_JAVRJR010000003.1	Protein Homology	CDS	87327	88229	.	+	0	ID=cds-WP_105963207.1;Parent=gene-RM588_RS06360;Dbxref=GenBank:WP_105963207.1;Name=WP_105963207.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479716.1;locus_tag=RM588_RS06360;product=EamA family transporter;protein_id=WP_105963207.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	88468	88815	.	-	.	ID=gene-RM588_RS06365;Name=RM588_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06365;old_locus_tag=RM588_06360
NZ_JAVRJR010000003.1	Protein Homology	CDS	88468	88815	.	-	0	ID=cds-WP_105996826.1;Parent=gene-RM588_RS06365;Dbxref=GenBank:WP_105996826.1;Name=WP_105996826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426206.1;locus_tag=RM588_RS06365;product=DUF4889 domain-containing protein;protein_id=WP_105996826.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	89011	89217	.	+	.	ID=gene-RM588_RS06370;Name=RM588_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06370;old_locus_tag=RM588_06365
NZ_JAVRJR010000003.1	Protein Homology	CDS	89011	89217	.	+	0	ID=cds-WP_103158654.1;Parent=gene-RM588_RS06370;Dbxref=GenBank:WP_103158654.1;Name=WP_103158654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488219.1;locus_tag=RM588_RS06370;product=sterile alpha motif-like domain-containing protein;protein_id=WP_103158654.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	89381	90586	.	+	.	ID=gene-RM588_RS06375;Name=RM588_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06375;old_locus_tag=RM588_06370
NZ_JAVRJR010000003.1	Protein Homology	CDS	89381	90586	.	+	0	ID=cds-WP_105996824.1;Parent=gene-RM588_RS06375;Dbxref=GenBank:WP_105996824.1;Name=WP_105996824.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613071.1;locus_tag=RM588_RS06375;product=CynX/NimT family MFS transporter;protein_id=WP_105996824.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	90647	91531	.	-	.	ID=gene-RM588_RS06380;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=RM588_RS06380;old_locus_tag=RM588_06375
NZ_JAVRJR010000003.1	Protein Homology	CDS	90647	91531	.	-	0	ID=cds-WP_037575060.1;Parent=gene-RM588_RS06380;Dbxref=GenBank:WP_037575060.1;Name=WP_037575060.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444225.1;locus_tag=RM588_RS06380;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_037575060.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	91622	93742	.	-	.	ID=gene-RM588_RS06385;Name=RM588_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06385;old_locus_tag=RM588_06380
NZ_JAVRJR010000003.1	Protein Homology	CDS	91622	93742	.	-	0	ID=cds-WP_311548107.1;Parent=gene-RM588_RS06385;Dbxref=GenBank:WP_311548107.1;Name=WP_311548107.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.7;locus_tag=RM588_RS06385;product=helix-turn-helix domain-containing protein;protein_id=WP_311548107.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	94321	95259	.	-	.	ID=gene-RM588_RS06390;Name=RM588_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06390;old_locus_tag=RM588_06385
NZ_JAVRJR010000003.1	Protein Homology	CDS	94321	95259	.	-	0	ID=cds-WP_103159531.1;Parent=gene-RM588_RS06390;Dbxref=GenBank:WP_103159531.1;Name=WP_103159531.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572573.1;locus_tag=RM588_RS06390;product=magnesium transporter CorA family protein;protein_id=WP_103159531.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	95252	95719	.	-	.	ID=gene-RM588_RS06395;Name=RM588_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06395;old_locus_tag=RM588_06390
NZ_JAVRJR010000003.1	Protein Homology	CDS	95252	95719	.	-	0	ID=cds-WP_037575051.1;Parent=gene-RM588_RS06395;Dbxref=GenBank:WP_037575051.1;Name=WP_037575051.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613075.1;locus_tag=RM588_RS06395;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575051.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	96006	97667	.	+	.	ID=gene-RM588_RS06400;Name=RM588_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06400;old_locus_tag=RM588_06395
NZ_JAVRJR010000003.1	Protein Homology	CDS	96006	97667	.	+	0	ID=cds-WP_105996839.1;Parent=gene-RM588_RS06400;Dbxref=GenBank:WP_105996839.1;Name=WP_105996839.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498664.1;locus_tag=RM588_RS06400;product=Na/Pi cotransporter family protein;protein_id=WP_105996839.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	97803	99041	.	+	.	ID=gene-RM588_RS06405;Name=RM588_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06405;old_locus_tag=RM588_06400
NZ_JAVRJR010000003.1	Protein Homology	CDS	97803	99041	.	+	0	ID=cds-WP_105996822.1;Parent=gene-RM588_RS06405;Dbxref=GenBank:WP_105996822.1;Name=WP_105996822.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: protein motif:HMM:NF016149.8;locus_tag=RM588_RS06405;product=copper resistance CopC/CopD family protein;protein_id=WP_105996822.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	99074	99685	.	+	.	ID=gene-RM588_RS06410;Name=RM588_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06410;old_locus_tag=RM588_06405
NZ_JAVRJR010000003.1	Protein Homology	CDS	99074	99685	.	+	0	ID=cds-WP_311548116.1;Parent=gene-RM588_RS06410;Dbxref=GenBank:WP_311548116.1;Name=WP_311548116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168199.1;locus_tag=RM588_RS06410;product=YcnI family protein;protein_id=WP_311548116.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	99752	100201	.	+	.	ID=gene-RM588_RS06415;Name=RM588_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06415;old_locus_tag=RM588_06410
NZ_JAVRJR010000003.1	Protein Homology	CDS	99752	100201	.	+	0	ID=cds-WP_037575041.1;Parent=gene-RM588_RS06415;Dbxref=GenBank:WP_037575041.1;Name=WP_037575041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426215.1;locus_tag=RM588_RS06415;product=DUF2871 domain-containing protein;protein_id=WP_037575041.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	100282	100698	.	-	.	ID=gene-RM588_RS06420;Name=RM588_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06420;old_locus_tag=RM588_06415
NZ_JAVRJR010000003.1	Protein Homology	CDS	100282	100698	.	-	0	ID=cds-WP_103159528.1;Parent=gene-RM588_RS06420;Dbxref=GenBank:WP_103159528.1;Name=WP_103159528.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426216.1;locus_tag=RM588_RS06420;product=GNAT family N-acetyltransferase;protein_id=WP_103159528.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	100714	101742	.	-	.	ID=gene-RM588_RS06425;Name=RM588_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06425;old_locus_tag=RM588_06420
NZ_JAVRJR010000003.1	Protein Homology	CDS	100714	101742	.	-	0	ID=cds-WP_311548108.1;Parent=gene-RM588_RS06425;Dbxref=GenBank:WP_311548108.1;Name=WP_311548108.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655970.1;locus_tag=RM588_RS06425;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_311548108.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	101865	103199	.	-	.	ID=gene-RM588_RS06430;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=RM588_RS06430;old_locus_tag=RM588_06425
NZ_JAVRJR010000003.1	Protein Homology	CDS	101865	103199	.	-	0	ID=cds-WP_105963200.1;Parent=gene-RM588_RS06430;Dbxref=GenBank:WP_105963200.1;Name=WP_105963200.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168203.1;locus_tag=RM588_RS06430;product=glucose transporter GlcP;protein_id=WP_105963200.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	103448	104437	.	-	.	ID=gene-RM588_RS06435;Name=RM588_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06435;old_locus_tag=RM588_06430
NZ_JAVRJR010000003.1	Protein Homology	CDS	103448	104437	.	-	0	ID=cds-WP_311548109.1;Parent=gene-RM588_RS06435;Dbxref=GenBank:WP_311548109.1;Name=WP_311548109.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613083.1;locus_tag=RM588_RS06435;product=acrylyl-CoA reductase family protein;protein_id=WP_311548109.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	104559	105074	.	+	.	ID=gene-RM588_RS06440;Name=RM588_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06440;old_locus_tag=RM588_06435
NZ_JAVRJR010000003.1	Protein Homology	CDS	104559	105074	.	+	0	ID=cds-WP_105963198.1;Parent=gene-RM588_RS06440;Dbxref=GenBank:WP_105963198.1;Name=WP_105963198.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168205.1;locus_tag=RM588_RS06440;product=GNAT family N-acetyltransferase;protein_id=WP_105963198.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	105153	105815	.	+	.	ID=gene-RM588_RS06445;Name=RM588_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06445;old_locus_tag=RM588_06440
NZ_JAVRJR010000003.1	Protein Homology	CDS	105153	105815	.	+	0	ID=cds-WP_107372083.1;Parent=gene-RM588_RS06445;Dbxref=GenBank:WP_107372083.1;Name=WP_107372083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219801.1;locus_tag=RM588_RS06445;product=hypothetical protein;protein_id=WP_107372083.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	106152	107753	.	+	.	ID=gene-RM588_RS06450;Name=RM588_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06450;old_locus_tag=RM588_06445
NZ_JAVRJR010000003.1	Protein Homology	CDS	106152	107753	.	+	0	ID=cds-WP_037575025.1;Parent=gene-RM588_RS06450;Dbxref=GenBank:WP_037575025.1;Name=WP_037575025.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426220.1;locus_tag=RM588_RS06450;product=L-lactate permease;protein_id=WP_037575025.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	107897	109060	.	-	.	ID=gene-RM588_RS06455;Name=RM588_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06455;old_locus_tag=RM588_06450
NZ_JAVRJR010000003.1	Protein Homology	CDS	107897	109060	.	-	0	ID=cds-WP_105996821.1;Parent=gene-RM588_RS06455;Dbxref=GenBank:WP_105996821.1;Name=WP_105996821.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729584.1;locus_tag=RM588_RS06455;product=glycosyltransferase family 4 protein;protein_id=WP_105996821.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	109407	110909	.	+	.	ID=gene-RM588_RS06460;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=RM588_RS06460;old_locus_tag=RM588_06455
NZ_JAVRJR010000003.1	Protein Homology	CDS	109407	110909	.	+	0	ID=cds-WP_037575021.1;Parent=gene-RM588_RS06460;Dbxref=GenBank:WP_037575021.1;Name=WP_037575021.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613089.1;locus_tag=RM588_RS06460;product=malate dehydrogenase (quinone);protein_id=WP_037575021.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	111006	112379	.	-	.	ID=gene-RM588_RS06465;Name=RM588_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06465;old_locus_tag=RM588_06460
NZ_JAVRJR010000003.1	Protein Homology	CDS	111006	112379	.	-	0	ID=cds-WP_311548110.1;Parent=gene-RM588_RS06465;Dbxref=GenBank:WP_311548110.1;Name=WP_311548110.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426226.1;locus_tag=RM588_RS06465;product=sensor histidine kinase;protein_id=WP_311548110.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	112372	113049	.	-	.	ID=gene-RM588_RS06470;Name=RM588_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06470;old_locus_tag=RM588_06465
NZ_JAVRJR010000003.1	Protein Homology	CDS	112372	113049	.	-	0	ID=cds-WP_037575017.1;Parent=gene-RM588_RS06470;Dbxref=GenBank:WP_037575017.1;Name=WP_037575017.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729582.1;locus_tag=RM588_RS06470;product=response regulator transcription factor;protein_id=WP_037575017.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	113241	114302	.	+	.	ID=gene-RM588_RS06475;Name=RM588_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06475;old_locus_tag=RM588_06470
NZ_JAVRJR010000003.1	Protein Homology	CDS	113241	114302	.	+	0	ID=cds-WP_105996820.1;Parent=gene-RM588_RS06475;Dbxref=GenBank:WP_105996820.1;Name=WP_105996820.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176794.1;locus_tag=RM588_RS06475;product=ABC transporter permease;protein_id=WP_105996820.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	114302	114976	.	+	.	ID=gene-RM588_RS06480;Name=RM588_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06480;old_locus_tag=RM588_06475
NZ_JAVRJR010000003.1	Protein Homology	CDS	114302	114976	.	+	0	ID=cds-WP_037575014.1;Parent=gene-RM588_RS06480;Dbxref=GenBank:WP_037575014.1;Name=WP_037575014.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426229.1;locus_tag=RM588_RS06480;product=ABC transporter ATP-binding protein;protein_id=WP_037575014.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	115031	116563	.	-	.	ID=gene-RM588_RS06485;Name=RM588_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06485;old_locus_tag=RM588_06480
NZ_JAVRJR010000003.1	Protein Homology	CDS	115031	116563	.	-	0	ID=cds-WP_107370332.1;Parent=gene-RM588_RS06485;Dbxref=GenBank:WP_107370332.1;Name=WP_107370332.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165510.1;locus_tag=RM588_RS06485;product=AbgT family transporter;protein_id=WP_107370332.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	116639	117340	.	-	.	ID=gene-RM588_RS06490;Name=RM588_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06490;old_locus_tag=RM588_06485
NZ_JAVRJR010000003.1	Protein Homology	CDS	116639	117340	.	-	0	ID=cds-WP_182470773.1;Parent=gene-RM588_RS06490;Dbxref=GenBank:WP_182470773.1;Name=WP_182470773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014724.7;locus_tag=RM588_RS06490;product=YdcF family protein;protein_id=WP_182470773.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	117815	118273	.	+	.	ID=gene-RM588_RS06495;Name=tcaR;gbkey=Gene;gene=tcaR;gene_biotype=protein_coding;locus_tag=RM588_RS06495;old_locus_tag=RM588_06490
NZ_JAVRJR010000003.1	Protein Homology	CDS	117815	118273	.	+	0	ID=cds-WP_037575010.1;Parent=gene-RM588_RS06495;Dbxref=GenBank:WP_037575010.1;Name=WP_037575010.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=tcaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426231.1;locus_tag=RM588_RS06495;product=MarR family transcriptional regulator TcaR;protein_id=WP_037575010.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	118389	119783	.	+	.	ID=gene-RM588_RS06500;Name=tcaA;gbkey=Gene;gene=tcaA;gene_biotype=protein_coding;locus_tag=RM588_RS06500;old_locus_tag=RM588_06495
NZ_JAVRJR010000003.1	Protein Homology	CDS	118389	119783	.	+	0	ID=cds-WP_037575008.1;Parent=gene-RM588_RS06500;Dbxref=GenBank:WP_037575008.1;Name=WP_037575008.1;gbkey=CDS;gene=tcaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169580.1;locus_tag=RM588_RS06500;product=membrane-associated protein TcaA;protein_id=WP_037575008.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	120119	120667	.	+	.	ID=gene-RM588_RS06505;Name=RM588_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06505;old_locus_tag=RM588_06500
NZ_JAVRJR010000003.1	Protein Homology	CDS	120119	120667	.	+	0	ID=cds-WP_103158955.1;Parent=gene-RM588_RS06505;Dbxref=GenBank:WP_103158955.1;Name=WP_103158955.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM588_RS06505;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103158955.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	121317	121940	.	-	.	ID=gene-RM588_RS06510;Name=RM588_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06510;old_locus_tag=RM588_06505
NZ_JAVRJR010000003.1	Protein Homology	CDS	121317	121940	.	-	0	ID=cds-WP_037575004.1;Parent=gene-RM588_RS06510;Dbxref=GenBank:WP_037575004.1;Name=WP_037575004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426235.1;locus_tag=RM588_RS06510;product=hypothetical protein;protein_id=WP_037575004.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	122055	122384	.	+	.	ID=gene-RM588_RS06515;Name=RM588_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06515;old_locus_tag=RM588_06510
NZ_JAVRJR010000003.1	Protein Homology	CDS	122055	122384	.	+	0	ID=cds-WP_107370333.1;Parent=gene-RM588_RS06515;Dbxref=GenBank:WP_107370333.1;Name=WP_107370333.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470023.1;locus_tag=RM588_RS06515;product=thioredoxin family protein;protein_id=WP_107370333.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	122438	123343	.	+	.	ID=gene-RM588_RS06520;Name=RM588_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06520;old_locus_tag=RM588_06515
NZ_JAVRJR010000003.1	Protein Homology	CDS	122438	123343	.	+	0	ID=cds-WP_037575000.1;Parent=gene-RM588_RS06520;Dbxref=GenBank:WP_037575000.1;Name=WP_037575000.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426237.1;locus_tag=RM588_RS06520;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_037575000.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	pseudogene	123662	123760	.	-	.	ID=gene-RM588_RS06525;Name=RM588_RS06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS06525;old_locus_tag=RM588_06520;partial=true;pseudo=true;start_range=.,123662
NZ_JAVRJR010000003.1	Protein Homology	CDS	123662	123760	.	-	0	ID=cds-RM588_RS06525;Parent=gene-RM588_RS06525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=RM588_RS06525;partial=true;product=hypothetical protein;pseudo=true;start_range=.,123662;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	123714	124700	.	+	.	ID=gene-RM588_RS06530;Name=RM588_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06530;old_locus_tag=RM588_06525
NZ_JAVRJR010000003.1	Protein Homology	CDS	123714	124700	.	+	0	ID=cds-WP_241954607.1;Parent=gene-RM588_RS06530;Dbxref=GenBank:WP_241954607.1;Name=WP_241954607.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=RM588_RS06530;product=PTS sugar transporter subunit IIC;protein_id=WP_241954607.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	124738	125214	.	-	.	ID=gene-RM588_RS06535;Name=RM588_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06535;old_locus_tag=RM588_06530
NZ_JAVRJR010000003.1	Protein Homology	CDS	124738	125214	.	-	0	ID=cds-WP_105963189.1;Parent=gene-RM588_RS06535;Dbxref=GenBank:WP_105963189.1;Name=WP_105963189.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426239.1;locus_tag=RM588_RS06535;product=thioesterase family protein;protein_id=WP_105963189.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	125341	126375	.	+	.	ID=gene-RM588_RS06540;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=RM588_RS06540;old_locus_tag=RM588_06535
NZ_JAVRJR010000003.1	Protein Homology	CDS	125341	126375	.	+	0	ID=cds-WP_105963188.1;Parent=gene-RM588_RS06540;Dbxref=GenBank:WP_105963188.1;Name=WP_105963188.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169588.1;locus_tag=RM588_RS06540;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_105963188.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	126514	127716	.	+	.	ID=gene-RM588_RS06545;Name=RM588_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06545;old_locus_tag=RM588_06540
NZ_JAVRJR010000003.1	Protein Homology	CDS	126514	127716	.	+	0	ID=cds-WP_037574994.1;Parent=gene-RM588_RS06545;Dbxref=GenBank:WP_037574994.1;Name=WP_037574994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477446.1;locus_tag=RM588_RS06545;product=GTP-binding protein;protein_id=WP_037574994.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	127840	129051	.	-	.	ID=gene-RM588_RS06550;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=RM588_RS06550;old_locus_tag=RM588_06545
NZ_JAVRJR010000003.1	Protein Homology	CDS	127840	129051	.	-	0	ID=cds-WP_037574992.1;Parent=gene-RM588_RS06550;Dbxref=GenBank:WP_037574992.1;Name=WP_037574992.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169590.1;locus_tag=RM588_RS06550;product=sodium/glutamate symporter;protein_id=WP_037574992.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	129205	130029	.	-	.	ID=gene-RM588_RS06555;Name=RM588_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06555;old_locus_tag=RM588_06550
NZ_JAVRJR010000003.1	Protein Homology	CDS	129205	130029	.	-	0	ID=cds-WP_311548111.1;Parent=gene-RM588_RS06555;Dbxref=GenBank:WP_311548111.1;Name=WP_311548111.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169591.1;locus_tag=RM588_RS06555;product=AraC family ligand binding domain-containing protein;protein_id=WP_311548111.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	130164	131009	.	+	.	ID=gene-RM588_RS06560;Name=RM588_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06560;old_locus_tag=RM588_06555
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	130164	131009	.	+	0	ID=cds-WP_311548112.1;Parent=gene-RM588_RS06560;Dbxref=GenBank:WP_311548112.1;Name=WP_311548112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06560;product=hypothetical protein;protein_id=WP_311548112.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	131173	132495	.	+	.	ID=gene-RM588_RS06565;Name=RM588_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06565;old_locus_tag=RM588_06560
NZ_JAVRJR010000003.1	Protein Homology	CDS	131173	132495	.	+	0	ID=cds-WP_037574985.1;Parent=gene-RM588_RS06565;Dbxref=GenBank:WP_037574985.1;Name=WP_037574985.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426251.1;locus_tag=RM588_RS06565;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_037574985.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	132570	133178	.	-	.	ID=gene-RM588_RS06570;Name=RM588_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06570;old_locus_tag=RM588_06565
NZ_JAVRJR010000003.1	Protein Homology	CDS	132570	133178	.	-	0	ID=cds-WP_037574983.1;Parent=gene-RM588_RS06570;Dbxref=GenBank:WP_037574983.1;Name=WP_037574983.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451953.1;locus_tag=RM588_RS06570;product=DNA-3-methyladenine glycosylase;protein_id=WP_037574983.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	133372	133965	.	+	.	ID=gene-RM588_RS06575;Name=RM588_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06575;old_locus_tag=RM588_06570
NZ_JAVRJR010000003.1	Protein Homology	CDS	133372	133965	.	+	0	ID=cds-WP_069191683.1;Parent=gene-RM588_RS06575;Dbxref=GenBank:WP_069191683.1;Name=WP_069191683.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426253.1;locus_tag=RM588_RS06575;product=DUF805 domain-containing protein;protein_id=WP_069191683.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	134213	135112	.	+	.	ID=gene-RM588_RS06580;Name=RM588_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06580;old_locus_tag=RM588_06575
NZ_JAVRJR010000003.1	Protein Homology	CDS	134213	135112	.	+	0	ID=cds-WP_107371832.1;Parent=gene-RM588_RS06580;Dbxref=GenBank:WP_107371832.1;Name=WP_107371832.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636490.1;locus_tag=RM588_RS06580;product=ABC transporter ATP-binding protein;protein_id=WP_107371832.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	135105	136340	.	+	.	ID=gene-RM588_RS06585;Name=RM588_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06585;old_locus_tag=RM588_06580
NZ_JAVRJR010000003.1	Protein Homology	CDS	135105	136340	.	+	0	ID=cds-WP_037574978.1;Parent=gene-RM588_RS06585;Dbxref=GenBank:WP_037574978.1;Name=WP_037574978.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729566.1;locus_tag=RM588_RS06585;product=ABC transporter permease;protein_id=WP_037574978.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	136459	136791	.	+	.	ID=gene-RM588_RS06590;Name=RM588_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06590;old_locus_tag=RM588_06585
NZ_JAVRJR010000003.1	Protein Homology	CDS	136459	136791	.	+	0	ID=cds-WP_103158962.1;Parent=gene-RM588_RS06590;Dbxref=GenBank:WP_103158962.1;Name=WP_103158962.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729565.1;locus_tag=RM588_RS06590;product=YnfA family protein;protein_id=WP_103158962.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	136947	137156	.	+	.	ID=gene-RM588_RS06595;Name=RM588_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06595;old_locus_tag=RM588_06590
NZ_JAVRJR010000003.1	Protein Homology	CDS	136947	137156	.	+	0	ID=cds-WP_037574974.1;Parent=gene-RM588_RS06595;Dbxref=GenBank:WP_037574974.1;Name=WP_037574974.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479678.1;locus_tag=RM588_RS06595;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574974.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	137245	137712	.	-	.	ID=gene-RM588_RS06600;Name=RM588_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06600;old_locus_tag=RM588_06595
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	137245	137712	.	-	0	ID=cds-WP_037574972.1;Parent=gene-RM588_RS06600;Dbxref=GenBank:WP_037574972.1;Name=WP_037574972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06600;product=SRPBCC family protein;protein_id=WP_037574972.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	137730	138389	.	-	.	ID=gene-RM588_RS06605;Name=RM588_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06605;old_locus_tag=RM588_06600
NZ_JAVRJR010000003.1	Protein Homology	CDS	137730	138389	.	-	0	ID=cds-WP_037574969.1;Parent=gene-RM588_RS06605;Dbxref=GenBank:WP_037574969.1;Name=WP_037574969.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169604.1;locus_tag=RM588_RS06605;product=MOSC domain-containing protein;protein_id=WP_037574969.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	138522	139211	.	+	.	ID=gene-RM588_RS06610;Name=RM588_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06610;old_locus_tag=RM588_06605
NZ_JAVRJR010000003.1	Protein Homology	CDS	138522	139211	.	+	0	ID=cds-WP_037574967.1;Parent=gene-RM588_RS06610;Dbxref=GenBank:WP_037574967.1;Name=WP_037574967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613126.1;locus_tag=RM588_RS06610;product=ribose 5-phosphate isomerase A;protein_id=WP_037574967.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	139252	140304	.	-	.	ID=gene-RM588_RS06615;Name=sdpC;gbkey=Gene;gene=sdpC;gene_biotype=protein_coding;locus_tag=RM588_RS06615;old_locus_tag=RM588_06610
NZ_JAVRJR010000003.1	Protein Homology	CDS	139252	140304	.	-	0	ID=cds-WP_105996814.1;Parent=gene-RM588_RS06615;Dbxref=GenBank:WP_105996814.1;Name=WP_105996814.1;gbkey=CDS;gene=sdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636483.1;locus_tag=RM588_RS06615;product=peptidoglycan release complex CPBP-like subunit SdpC;protein_id=WP_105996814.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	140564	141493	.	+	.	ID=gene-RM588_RS06620;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=RM588_RS06620;old_locus_tag=RM588_06615
NZ_JAVRJR010000003.1	Protein Homology	CDS	140564	141493	.	+	0	ID=cds-WP_037574965.1;Parent=gene-RM588_RS06620;Dbxref=GenBank:WP_037574965.1;Name=WP_037574965.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613127.1;locus_tag=RM588_RS06620;product=formimidoylglutamase;protein_id=WP_037574965.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	141556	142434	.	-	.	ID=gene-RM588_RS06625;Name=RM588_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06625;old_locus_tag=RM588_06620
NZ_JAVRJR010000003.1	Protein Homology	CDS	141556	142434	.	-	0	ID=cds-WP_103158966.1;Parent=gene-RM588_RS06625;Dbxref=GenBank:WP_103158966.1;Name=WP_103158966.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382899.1;locus_tag=RM588_RS06625;product=LysR family transcriptional regulator;protein_id=WP_103158966.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	142742	144016	.	+	.	ID=gene-RM588_RS06630;Name=RM588_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06630;old_locus_tag=RM588_06625
NZ_JAVRJR010000003.1	Protein Homology	CDS	142742	144016	.	+	0	ID=cds-WP_371874987.1;Parent=gene-RM588_RS06630;Dbxref=GenBank:WP_371874987.1;Name=WP_371874987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729562.1;locus_tag=RM588_RS06630;product=YjiH family protein;protein_id=WP_371874987.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	144035	145702	.	+	.	ID=gene-RM588_RS06635;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=RM588_RS06635;old_locus_tag=RM588_06630
NZ_JAVRJR010000003.1	Protein Homology	CDS	144035	145702	.	+	0	ID=cds-WP_037574959.1;Parent=gene-RM588_RS06635;Dbxref=GenBank:WP_037574959.1;Name=WP_037574959.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911396.1;locus_tag=RM588_RS06635;product=urocanate hydratase;protein_id=WP_037574959.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	145702	146934	.	+	.	ID=gene-RM588_RS06640;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=RM588_RS06640;old_locus_tag=RM588_06635
NZ_JAVRJR010000003.1	Protein Homology	CDS	145702	146934	.	+	0	ID=cds-WP_311548113.1;Parent=gene-RM588_RS06640;Dbxref=GenBank:WP_311548113.1;Name=WP_311548113.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468897.1;locus_tag=RM588_RS06640;product=imidazolonepropionase;protein_id=WP_311548113.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	147150	148286	.	+	.	ID=gene-RM588_RS06645;Name=RM588_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06645;old_locus_tag=RM588_06640
NZ_JAVRJR010000003.1	Protein Homology	CDS	147150	148286	.	+	0	ID=cds-WP_103159006.1;Parent=gene-RM588_RS06645;Dbxref=GenBank:WP_103159006.1;Name=WP_103159006.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506876.1;locus_tag=RM588_RS06645;product=SulP family inorganic anion transporter;protein_id=WP_103159006.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	148296	149426	.	+	.	ID=gene-RM588_RS06650;Name=RM588_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06650;old_locus_tag=RM588_06645
NZ_JAVRJR010000003.1	Protein Homology	CDS	148296	149426	.	+	0	ID=cds-WP_037574955.1;Parent=gene-RM588_RS06650;Dbxref=GenBank:WP_037574955.1;Name=WP_037574955.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471844.1;locus_tag=RM588_RS06650;product=amidohydrolase;protein_id=WP_037574955.1;transl_table=11
NZ_JAVRJR010000003.1	cmsearch	riboswitch	149472	149569	.	+	.	ID=id-NZ_JAVRJR010000003.1:149472..149569;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000003.1	RefSeq	gene	149660	150970	.	+	.	ID=gene-RM588_RS06655;Name=RM588_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06655;old_locus_tag=RM588_06650
NZ_JAVRJR010000003.1	Protein Homology	CDS	149660	150970	.	+	0	ID=cds-WP_311548114.1;Parent=gene-RM588_RS06655;Dbxref=GenBank:WP_311548114.1;Name=WP_311548114.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460143.1;locus_tag=RM588_RS06655;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_311548114.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	151084	151581	.	+	.	ID=gene-RM588_RS06660;Name=RM588_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06660;old_locus_tag=RM588_06655
NZ_JAVRJR010000003.1	Protein Homology	CDS	151084	151581	.	+	0	ID=cds-WP_037574951.1;Parent=gene-RM588_RS06660;Dbxref=GenBank:WP_037574951.1;Name=WP_037574951.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613136.1;locus_tag=RM588_RS06660;product=SRPBCC family protein;protein_id=WP_037574951.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	151746	152276	.	-	.	ID=gene-RM588_RS06665;Name=RM588_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06665;old_locus_tag=RM588_06660
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	151746	152276	.	-	0	ID=cds-WP_037574949.1;Parent=gene-RM588_RS06665;Dbxref=GenBank:WP_037574949.1;Name=WP_037574949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06665;product=hypothetical protein;protein_id=WP_037574949.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	152457	153404	.	+	.	ID=gene-RM588_RS06670;Name=RM588_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06670;old_locus_tag=RM588_06665
NZ_JAVRJR010000003.1	Protein Homology	CDS	152457	153404	.	+	0	ID=cds-WP_037574947.1;Parent=gene-RM588_RS06670;Dbxref=GenBank:WP_037574947.1;Name=WP_037574947.1;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912301.1;locus_tag=RM588_RS06670;product=bile acid:sodium symporter family protein;protein_id=WP_037574947.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	153715	153984	.	+	.	ID=gene-RM588_RS06675;Name=RM588_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06675;old_locus_tag=RM588_06670
NZ_JAVRJR010000003.1	Protein Homology	CDS	153715	153984	.	+	0	ID=cds-WP_037574945.1;Parent=gene-RM588_RS06675;Dbxref=GenBank:WP_037574945.1;Name=WP_037574945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613139.1;locus_tag=RM588_RS06675;product=hypothetical protein;protein_id=WP_037574945.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	154056	154886	.	+	.	ID=gene-RM588_RS06680;Name=RM588_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06680;old_locus_tag=RM588_06675
NZ_JAVRJR010000003.1	Protein Homology	CDS	154056	154886	.	+	0	ID=cds-WP_105996810.1;Parent=gene-RM588_RS06680;Dbxref=GenBank:WP_105996810.1;Name=WP_105996810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729555.1;locus_tag=RM588_RS06680;product=VOC family protein;protein_id=WP_105996810.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	154949	155593	.	+	.	ID=gene-RM588_RS06685;Name=RM588_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06685;old_locus_tag=RM588_06680
NZ_JAVRJR010000003.1	Protein Homology	CDS	154949	155593	.	+	0	ID=cds-WP_136731984.1;Parent=gene-RM588_RS06685;Dbxref=GenBank:WP_136731984.1;Name=WP_136731984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729554.1;locus_tag=RM588_RS06685;product=HAD family hydrolase;protein_id=WP_136731984.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	155590	155781	.	+	.	ID=gene-RM588_RS06690;Name=RM588_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06690;old_locus_tag=RM588_06685
NZ_JAVRJR010000003.1	Protein Homology	CDS	155590	155781	.	+	0	ID=cds-WP_037574938.1;Parent=gene-RM588_RS06690;Dbxref=GenBank:WP_037574938.1;Name=WP_037574938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169624.1;locus_tag=RM588_RS06690;product=hypothetical protein;protein_id=WP_037574938.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	155886	156068	.	-	.	ID=gene-RM588_RS06695;Name=RM588_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06695;old_locus_tag=RM588_06690
NZ_JAVRJR010000003.1	Protein Homology	CDS	155886	156068	.	-	0	ID=cds-WP_136731983.1;Parent=gene-RM588_RS06695;Dbxref=GenBank:WP_136731983.1;Name=WP_136731983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613143.1;locus_tag=RM588_RS06695;product=hypothetical protein;protein_id=WP_136731983.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	156071	156409	.	-	.	ID=gene-RM588_RS06700;Name=RM588_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06700;old_locus_tag=RM588_06695
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	156071	156409	.	-	0	ID=cds-WP_105963173.1;Parent=gene-RM588_RS06700;Dbxref=GenBank:WP_105963173.1;Name=WP_105963173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06700;product=hypothetical protein;protein_id=WP_105963173.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	156466	157293	.	-	.	ID=gene-RM588_RS06705;Name=RM588_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06705;old_locus_tag=RM588_06700
NZ_JAVRJR010000003.1	Protein Homology	CDS	156466	157293	.	-	0	ID=cds-WP_105963172.1;Parent=gene-RM588_RS06705;Dbxref=GenBank:WP_105963172.1;Name=WP_105963172.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729552.1;locus_tag=RM588_RS06705;product=formate/nitrite transporter family protein;protein_id=WP_105963172.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	157624	159015	.	+	.	ID=gene-RM588_RS06710;Name=RM588_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06710;old_locus_tag=RM588_06705
NZ_JAVRJR010000003.1	Protein Homology	CDS	157624	159015	.	+	0	ID=cds-WP_105963171.1;Parent=gene-RM588_RS06710;Dbxref=GenBank:WP_105963171.1;Name=WP_105963171.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613146.1;locus_tag=RM588_RS06710;product=amino acid permease;protein_id=WP_105963171.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	159267	160676	.	-	.	ID=gene-RM588_RS06715;Name=RM588_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06715;old_locus_tag=RM588_06710
NZ_JAVRJR010000003.1	Protein Homology	CDS	159267	160676	.	-	0	ID=cds-WP_105996808.1;Parent=gene-RM588_RS06715;Dbxref=GenBank:WP_105996808.1;Name=WP_105996808.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432328.1;locus_tag=RM588_RS06715;product=PTS transporter subunit EIIC;protein_id=WP_105996808.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	160693	161580	.	-	.	ID=gene-RM588_RS06720;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=RM588_RS06720;old_locus_tag=RM588_06715
NZ_JAVRJR010000003.1	Protein Homology	CDS	160693	161580	.	-	0	ID=cds-WP_037574924.1;Parent=gene-RM588_RS06720;Dbxref=GenBank:WP_037574924.1;Name=WP_037574924.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510093.1;locus_tag=RM588_RS06720;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_037574924.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	161561	162628	.	-	.	ID=gene-RM588_RS06725;Name=RM588_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06725;old_locus_tag=RM588_06720
NZ_JAVRJR010000003.1	Protein Homology	CDS	161561	162628	.	-	0	ID=cds-WP_107377381.1;Parent=gene-RM588_RS06725;Dbxref=GenBank:WP_107377381.1;Name=WP_107377381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039260.6;locus_tag=RM588_RS06725;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_107377381.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	162712	163044	.	-	.	ID=gene-RM588_RS06730;Name=RM588_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06730;old_locus_tag=RM588_06725
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	162712	163044	.	-	0	ID=cds-WP_107360555.1;Parent=gene-RM588_RS06730;Dbxref=GenBank:WP_107360555.1;Name=WP_107360555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06730;product=hypothetical protein;protein_id=WP_107360555.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	163136	163867	.	+	.	ID=gene-RM588_RS06735;Name=RM588_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06735;old_locus_tag=RM588_06730
NZ_JAVRJR010000003.1	Protein Homology	CDS	163136	163867	.	+	0	ID=cds-WP_103158981.1;Parent=gene-RM588_RS06735;Dbxref=GenBank:WP_103158981.1;Name=WP_103158981.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426283.1;locus_tag=RM588_RS06735;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_103158981.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	164171	164866	.	-	.	ID=gene-RM588_RS06740;Name=RM588_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06740;old_locus_tag=RM588_06735
NZ_JAVRJR010000003.1	Protein Homology	CDS	164171	164866	.	-	0	ID=cds-WP_037574913.1;Parent=gene-RM588_RS06740;Dbxref=GenBank:WP_037574913.1;Name=WP_037574913.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729550.1;locus_tag=RM588_RS06740;product=helix-turn-helix transcriptional regulator;protein_id=WP_037574913.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	165331	166125	.	+	.	ID=gene-RM588_RS06745;Name=RM588_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06745;old_locus_tag=RM588_06740
NZ_JAVRJR010000003.1	Protein Homology	CDS	165331	166125	.	+	0	ID=cds-WP_107360713.1;Parent=gene-RM588_RS06745;Dbxref=GenBank:WP_107360713.1;Name=WP_107360713.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382877.1;locus_tag=RM588_RS06745;product=inositol monophosphatase family protein;protein_id=WP_107360713.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	166274	167188	.	+	.	ID=gene-RM588_RS06750;Name=RM588_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06750;old_locus_tag=RM588_06745
NZ_JAVRJR010000003.1	Protein Homology	CDS	166274	167188	.	+	0	ID=cds-WP_107360715.1;Parent=gene-RM588_RS06750;Dbxref=GenBank:WP_107360715.1;Name=WP_107360715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460126.1;locus_tag=RM588_RS06750;product=LCP family glycopolymer transferase;protein_id=WP_107360715.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	167285	167926	.	+	.	ID=gene-RM588_RS06755;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=RM588_RS06755;old_locus_tag=RM588_06750
NZ_JAVRJR010000003.1	Protein Homology	CDS	167285	167926	.	+	0	ID=cds-WP_107360712.1;Parent=gene-RM588_RS06755;Dbxref=GenBank:WP_107360712.1;Name=WP_107360712.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167170.1;locus_tag=RM588_RS06755;product=pyroglutamyl-peptidase I;protein_id=WP_107360712.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	168099	171035	.	+	.	ID=gene-RM588_RS06760;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=RM588_RS06760;old_locus_tag=RM588_06755
NZ_JAVRJR010000003.1	Protein Homology	CDS	168099	171035	.	+	0	ID=cds-WP_105963164.1;Parent=gene-RM588_RS06760;Dbxref=GenBank:WP_105963164.1;Name=WP_105963164.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=RM588_RS06760;product=formate dehydrogenase subunit alpha;protein_id=WP_105963164.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	171035	171499	.	+	.	ID=gene-RM588_RS06765;Name=RM588_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06765;old_locus_tag=RM588_06760
NZ_JAVRJR010000003.1	Protein Homology	CDS	171035	171499	.	+	0	ID=cds-WP_037574902.1;Parent=gene-RM588_RS06765;Dbxref=GenBank:WP_037574902.1;Name=WP_037574902.1;Ontology_term=GO:0015267,GO:0016020,GO:1990204;gbkey=CDS;go_component=membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=channel activity|0015267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506903.1;locus_tag=RM588_RS06765;product=helical membrane plugin domain-containing protein;protein_id=WP_037574902.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	171613	171855	.	+	.	ID=gene-RM588_RS06770;Name=RM588_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06770;old_locus_tag=RM588_06765
NZ_JAVRJR010000003.1	Protein Homology	CDS	171613	171855	.	+	0	ID=cds-WP_037574900.1;Parent=gene-RM588_RS06770;Dbxref=GenBank:WP_037574900.1;Name=WP_037574900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165357.1;locus_tag=RM588_RS06770;product=hypothetical protein;protein_id=WP_037574900.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	171882	172664	.	+	.	ID=gene-RM588_RS06775;Name=RM588_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06775;old_locus_tag=RM588_06770
NZ_JAVRJR010000003.1	Protein Homology	CDS	171882	172664	.	+	0	ID=cds-WP_105967392.1;Parent=gene-RM588_RS06775;Dbxref=GenBank:WP_105967392.1;Name=WP_105967392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739218.1;locus_tag=RM588_RS06775;product=N-acetylglucosaminidase;protein_id=WP_105967392.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	172795	173919	.	+	.	ID=gene-RM588_RS06780;Name=RM588_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06780;old_locus_tag=RM588_06775
NZ_JAVRJR010000003.1	Protein Homology	CDS	172795	173919	.	+	0	ID=cds-WP_107360711.1;Parent=gene-RM588_RS06780;Dbxref=GenBank:WP_107360711.1;Name=WP_107360711.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382869.1;locus_tag=RM588_RS06780;product=FAD-dependent monooxygenase;protein_id=WP_107360711.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	173994	174950	.	-	.	ID=gene-RM588_RS06785;Name=RM588_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06785;old_locus_tag=RM588_06780
NZ_JAVRJR010000003.1	Protein Homology	CDS	173994	174950	.	-	0	ID=cds-WP_105965541.1;Parent=gene-RM588_RS06785;Dbxref=GenBank:WP_105965541.1;Name=WP_105965541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275076.1;locus_tag=RM588_RS06785;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_105965541.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	175156	175725	.	-	.	ID=gene-RM588_RS06790;Name=RM588_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06790;old_locus_tag=RM588_06785
NZ_JAVRJR010000003.1	Protein Homology	CDS	175156	175725	.	-	0	ID=cds-WP_107360709.1;Parent=gene-RM588_RS06790;Dbxref=GenBank:WP_107360709.1;Name=WP_107360709.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165363.1;locus_tag=RM588_RS06790;product=CHAP domain-containing protein;protein_id=WP_107360709.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	176123	176500	.	-	.	ID=gene-RM588_RS06795;Name=RM588_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06795;old_locus_tag=RM588_06790
NZ_JAVRJR010000003.1	Protein Homology	CDS	176123	176500	.	-	0	ID=cds-WP_037574888.1;Parent=gene-RM588_RS06795;Dbxref=GenBank:WP_037574888.1;Name=WP_037574888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465507.1;locus_tag=RM588_RS06795;product=DUF4870 domain-containing protein;protein_id=WP_037574888.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	176691	177767	.	+	.	ID=gene-RM588_RS06800;Name=RM588_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06800;old_locus_tag=RM588_06795
NZ_JAVRJR010000003.1	Protein Homology	CDS	176691	177767	.	+	0	ID=cds-WP_105963160.1;Parent=gene-RM588_RS06800;Dbxref=GenBank:WP_105963160.1;Name=WP_105963160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165364.1;locus_tag=RM588_RS06800;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_105963160.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	177787	179199	.	+	.	ID=gene-RM588_RS06805;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM588_RS06805;old_locus_tag=RM588_06800
NZ_JAVRJR010000003.1	Protein Homology	CDS	177787	179199	.	+	0	ID=cds-WP_037574882.1;Parent=gene-RM588_RS06805;Dbxref=GenBank:WP_037574882.1;Name=WP_037574882.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471352.1;locus_tag=RM588_RS06805;product=Na+/H+ antiporter NhaC;protein_id=WP_037574882.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	179324	179797	.	+	.	ID=gene-RM588_RS06810;Name=RM588_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06810;old_locus_tag=RM588_06805
NZ_JAVRJR010000003.1	Protein Homology	CDS	179324	179797	.	+	0	ID=cds-WP_107360708.1;Parent=gene-RM588_RS06810;Dbxref=GenBank:WP_107360708.1;Name=WP_107360708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613165.1;locus_tag=RM588_RS06810;product=hypothetical protein;protein_id=WP_107360708.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	179940	180722	.	-	.	ID=gene-RM588_RS06815;Name=RM588_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06815;old_locus_tag=RM588_06810
NZ_JAVRJR010000003.1	Protein Homology	CDS	179940	180722	.	-	0	ID=cds-WP_105963158.1;Parent=gene-RM588_RS06815;Dbxref=GenBank:WP_105963158.1;Name=WP_105963158.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717383.1;locus_tag=RM588_RS06815;product=CHAP domain-containing protein;protein_id=WP_105963158.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	181176	181520	.	+	.	ID=gene-RM588_RS06820;Name=RM588_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06820;old_locus_tag=RM588_06815
NZ_JAVRJR010000003.1	Protein Homology	CDS	181176	181520	.	+	0	ID=cds-WP_103158991.1;Parent=gene-RM588_RS06820;Dbxref=GenBank:WP_103158991.1;Name=WP_103158991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461846.1;locus_tag=RM588_RS06820;product=PH domain-containing protein;protein_id=WP_103158991.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	181650	182699	.	+	.	ID=gene-RM588_RS06825;Name=RM588_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06825;old_locus_tag=RM588_06820
NZ_JAVRJR010000003.1	Protein Homology	CDS	181650	182699	.	+	0	ID=cds-WP_107360707.1;Parent=gene-RM588_RS06825;Dbxref=GenBank:WP_107360707.1;Name=WP_107360707.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613167.1;locus_tag=RM588_RS06825;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_107360707.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	182718	183071	.	+	.	ID=gene-RM588_RS06830;Name=RM588_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06830;old_locus_tag=RM588_06825
NZ_JAVRJR010000003.1	Protein Homology	CDS	182718	183071	.	+	0	ID=cds-WP_037574870.1;Parent=gene-RM588_RS06830;Dbxref=GenBank:WP_037574870.1;Name=WP_037574870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486907.1;locus_tag=RM588_RS06830;product=DoxX family protein;protein_id=WP_037574870.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	183330	183677	.	+	.	ID=gene-RM588_RS06835;Name=RM588_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06835;old_locus_tag=RM588_06830
NZ_JAVRJR010000003.1	Protein Homology	CDS	183330	183677	.	+	0	ID=cds-WP_037574867.1;Parent=gene-RM588_RS06835;Dbxref=GenBank:WP_037574867.1;Name=WP_037574867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166577.1;locus_tag=RM588_RS06835;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_037574867.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	183942	185108	.	+	.	ID=gene-RM588_RS06840;Name=RM588_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06840;old_locus_tag=RM588_06835
NZ_JAVRJR010000003.1	Protein Homology	CDS	183942	185108	.	+	0	ID=cds-WP_037574864.1;Parent=gene-RM588_RS06840;Dbxref=GenBank:WP_037574864.1;Name=WP_037574864.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169652.1;locus_tag=RM588_RS06840;product=acyl-CoA dehydrogenase family protein;protein_id=WP_037574864.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	185196	185591	.	+	.	ID=gene-RM588_RS06845;Name=RM588_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06845;old_locus_tag=RM588_06840
NZ_JAVRJR010000003.1	Protein Homology	CDS	185196	185591	.	+	0	ID=cds-WP_037574862.1;Parent=gene-RM588_RS06845;Dbxref=GenBank:WP_037574862.1;Name=WP_037574862.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613172.1;locus_tag=RM588_RS06845;product=YbaN family protein;protein_id=WP_037574862.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	185779	186693	.	+	.	ID=gene-RM588_RS06850;Name=RM588_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06850;old_locus_tag=RM588_06845
NZ_JAVRJR010000003.1	Protein Homology	CDS	185779	186693	.	+	0	ID=cds-WP_037574859.1;Parent=gene-RM588_RS06850;Dbxref=GenBank:WP_037574859.1;Name=WP_037574859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471258.1;locus_tag=RM588_RS06850;product=ABC transporter substrate-binding protein;protein_id=WP_037574859.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	187022	187576	.	+	.	ID=gene-RM588_RS06855;Name=RM588_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06855;old_locus_tag=RM588_06850
NZ_JAVRJR010000003.1	Protein Homology	CDS	187022	187576	.	+	0	ID=cds-WP_037574857.1;Parent=gene-RM588_RS06855;Dbxref=GenBank:WP_037574857.1;Name=WP_037574857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166586.1;locus_tag=RM588_RS06855;product=biotin transporter BioY;protein_id=WP_037574857.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	187601	188359	.	+	.	ID=gene-RM588_RS06860;Name=RM588_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06860;old_locus_tag=RM588_06855
NZ_JAVRJR010000003.1	Protein Homology	CDS	187601	188359	.	+	0	ID=cds-WP_241954937.1;Parent=gene-RM588_RS06860;Dbxref=GenBank:WP_241954937.1;Name=WP_241954937.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426315.1;locus_tag=RM588_RS06860;product=GNAT family N-acetyltransferase;protein_id=WP_241954937.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	188431	189228	.	-	.	ID=gene-RM588_RS06865;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=RM588_RS06865;old_locus_tag=RM588_06860
NZ_JAVRJR010000003.1	Protein Homology	CDS	188431	189228	.	-	0	ID=cds-WP_037574851.1;Parent=gene-RM588_RS06865;Dbxref=GenBank:WP_037574851.1;Name=WP_037574851.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501012.1;locus_tag=RM588_RS06865;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_037574851.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	189417	190190	.	+	.	ID=gene-RM588_RS06870;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=RM588_RS06870;old_locus_tag=RM588_06865
NZ_JAVRJR010000003.1	Protein Homology	CDS	189417	190190	.	+	0	ID=cds-WP_103158995.1;Parent=gene-RM588_RS06870;Dbxref=GenBank:WP_103158995.1;Name=WP_103158995.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166593.1;locus_tag=RM588_RS06870;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_103158995.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	190199	190870	.	+	.	ID=gene-RM588_RS06875;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=RM588_RS06875;old_locus_tag=RM588_06870
NZ_JAVRJR010000003.1	Protein Homology	CDS	190199	190870	.	+	0	ID=cds-WP_037574845.1;Parent=gene-RM588_RS06875;Dbxref=GenBank:WP_037574845.1;Name=WP_037574845.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113094.1;locus_tag=RM588_RS06875;product=molybdate ABC transporter permease subunit;protein_id=WP_037574845.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	190871	191497	.	+	.	ID=gene-RM588_RS06880;Name=RM588_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06880;old_locus_tag=RM588_06875
NZ_JAVRJR010000003.1	Protein Homology	CDS	190871	191497	.	+	0	ID=cds-WP_037574842.1;Parent=gene-RM588_RS06880;Dbxref=GenBank:WP_037574842.1;Name=WP_037574842.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613187.1;locus_tag=RM588_RS06880;product=ATP-binding cassette domain-containing protein;protein_id=WP_037574842.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	191705	192709	.	+	.	ID=gene-RM588_RS06885;Name=RM588_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06885;old_locus_tag=RM588_06880
NZ_JAVRJR010000003.1	Protein Homology	CDS	191705	192709	.	+	0	ID=cds-WP_037574840.1;Parent=gene-RM588_RS06885;Dbxref=GenBank:WP_037574840.1;Name=WP_037574840.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453805.1;locus_tag=RM588_RS06885;product=ThiF family adenylyltransferase;protein_id=WP_037574840.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	192722	193222	.	+	.	ID=gene-RM588_RS06890;Name=RM588_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06890;old_locus_tag=RM588_06885
NZ_JAVRJR010000003.1	Protein Homology	CDS	192722	193222	.	+	0	ID=cds-WP_103158996.1;Parent=gene-RM588_RS06890;Dbxref=GenBank:WP_103158996.1;Name=WP_103158996.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382827.1;locus_tag=RM588_RS06890;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_103158996.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	193305	193787	.	-	.	ID=gene-RM588_RS06895;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=RM588_RS06895;old_locus_tag=RM588_06890
NZ_JAVRJR010000003.1	Protein Homology	CDS	193305	193787	.	-	0	ID=cds-WP_037574834.1;Parent=gene-RM588_RS06895;Dbxref=GenBank:WP_037574834.1;Name=WP_037574834.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722900.1;locus_tag=RM588_RS06895;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_037574834.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	193856	195115	.	+	.	ID=gene-RM588_RS06900;Name=RM588_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06900;old_locus_tag=RM588_06895
NZ_JAVRJR010000003.1	Protein Homology	CDS	193856	195115	.	+	0	ID=cds-WP_103158997.1;Parent=gene-RM588_RS06900;Dbxref=GenBank:WP_103158997.1;Name=WP_103158997.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382825.1;locus_tag=RM588_RS06900;product=molybdopterin molybdotransferase MoeA;protein_id=WP_103158997.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	195112	195591	.	+	.	ID=gene-RM588_RS06905;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=RM588_RS06905;old_locus_tag=RM588_06900
NZ_JAVRJR010000003.1	Protein Homology	CDS	195112	195591	.	+	0	ID=cds-WP_107360510.1;Parent=gene-RM588_RS06905;Dbxref=GenBank:WP_107360510.1;Name=WP_107360510.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461817.1;locus_tag=RM588_RS06905;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_107360510.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	195593	196045	.	+	.	ID=gene-RM588_RS06910;Name=RM588_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06910;old_locus_tag=RM588_06905
NZ_JAVRJR010000003.1	Protein Homology	CDS	195593	196045	.	+	0	ID=cds-WP_037574826.1;Parent=gene-RM588_RS06910;Dbxref=GenBank:WP_037574826.1;Name=WP_037574826.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506945.1;locus_tag=RM588_RS06910;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_037574826.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	196042	196275	.	+	.	ID=gene-RM588_RS06915;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=RM588_RS06915;old_locus_tag=RM588_06910
NZ_JAVRJR010000003.1	Protein Homology	CDS	196042	196275	.	+	0	ID=cds-WP_037574823.1;Parent=gene-RM588_RS06915;Dbxref=GenBank:WP_037574823.1;Name=WP_037574823.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169677.1;locus_tag=RM588_RS06915;product=molybdopterin converting factor subunit 1;protein_id=WP_037574823.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	196285	196893	.	+	.	ID=gene-RM588_RS06920;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=RM588_RS06920;old_locus_tag=RM588_06915
NZ_JAVRJR010000003.1	Protein Homology	CDS	196285	196893	.	+	0	ID=cds-WP_107360511.1;Parent=gene-RM588_RS06920;Dbxref=GenBank:WP_107360511.1;Name=WP_107360511.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509294.1;locus_tag=RM588_RS06920;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_107360511.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	196908	197930	.	+	.	ID=gene-RM588_RS06925;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=RM588_RS06925;old_locus_tag=RM588_06920
NZ_JAVRJR010000003.1	Protein Homology	CDS	196908	197930	.	+	0	ID=cds-WP_107360512.1;Parent=gene-RM588_RS06925;Dbxref=GenBank:WP_107360512.1;Name=WP_107360512.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=RM588_RS06925;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_107360512.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	198049	199881	.	-	.	ID=gene-RM588_RS06930;Name=RM588_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06930;old_locus_tag=RM588_06925
NZ_JAVRJR010000003.1	Protein Homology	CDS	198049	199881	.	-	0	ID=cds-WP_107360513.1;Parent=gene-RM588_RS06930;Dbxref=GenBank:WP_107360513.1;Name=WP_107360513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169680.1;locus_tag=RM588_RS06930;product=DUF8508 domain-containing protein;protein_id=WP_107360513.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	200079	200522	.	-	.	ID=gene-RM588_RS06935;Name=RM588_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06935;old_locus_tag=RM588_06930
NZ_JAVRJR010000003.1	Protein Homology	CDS	200079	200522	.	-	0	ID=cds-WP_107360514.1;Parent=gene-RM588_RS06935;Dbxref=GenBank:WP_107360514.1;Name=WP_107360514.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169682.1;locus_tag=RM588_RS06935;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_107360514.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	200749	201516	.	+	.	ID=gene-RM588_RS06940;Name=RM588_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06940;old_locus_tag=RM588_06935
NZ_JAVRJR010000003.1	Protein Homology	CDS	200749	201516	.	+	0	ID=cds-WP_103159001.1;Parent=gene-RM588_RS06940;Dbxref=GenBank:WP_103159001.1;Name=WP_103159001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426336.1;locus_tag=RM588_RS06940;product=VOC family protein;protein_id=WP_103159001.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	201507	201761	.	-	.	ID=gene-RM588_RS06945;Name=RM588_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06945;old_locus_tag=RM588_06940
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	201507	201761	.	-	0	ID=cds-WP_107360515.1;Parent=gene-RM588_RS06945;Dbxref=GenBank:WP_107360515.1;Name=WP_107360515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS06945;product=hypothetical protein;protein_id=WP_107360515.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	201871	203121	.	+	.	ID=gene-RM588_RS06950;Name=RM588_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06950;old_locus_tag=RM588_06945
NZ_JAVRJR010000003.1	Protein Homology	CDS	201871	203121	.	+	0	ID=cds-WP_107360516.1;Parent=gene-RM588_RS06950;Dbxref=GenBank:WP_107360516.1;Name=WP_107360516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506953.1;locus_tag=RM588_RS06950;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_107360516.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	203505	206660	.	+	.	ID=gene-RM588_RS06955;Name=RM588_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06955;old_locus_tag=RM588_06950
NZ_JAVRJR010000003.1	Protein Homology	CDS	203505	206660	.	+	0	ID=cds-WP_037574809.1;Parent=gene-RM588_RS06955;Dbxref=GenBank:WP_037574809.1;Name=WP_037574809.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613202.1;locus_tag=RM588_RS06955;product=efflux RND transporter permease subunit;protein_id=WP_037574809.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	206906	208057	.	+	.	ID=gene-RM588_RS06960;Name=RM588_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06960;old_locus_tag=RM588_06955
NZ_JAVRJR010000003.1	Protein Homology	CDS	206906	208057	.	+	0	ID=cds-WP_107360518.1;Parent=gene-RM588_RS06960;Dbxref=GenBank:WP_107360518.1;Name=WP_107360518.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723795.1;locus_tag=RM588_RS06960;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_107360518.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	208124	208441	.	-	.	ID=gene-RM588_RS06965;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=RM588_RS06965;old_locus_tag=RM588_06960
NZ_JAVRJR010000003.1	Protein Homology	CDS	208124	208441	.	-	0	ID=cds-WP_037574805.1;Parent=gene-RM588_RS06965;Dbxref=GenBank:WP_037574805.1;Name=WP_037574805.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613204.1;locus_tag=RM588_RS06965;product=membrane stabilizing protein MspA;protein_id=WP_037574805.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	208484	208657	.	-	.	ID=gene-RM588_RS06970;Name=RM588_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06970;old_locus_tag=RM588_06965
NZ_JAVRJR010000003.1	Protein Homology	CDS	208484	208657	.	-	0	ID=cds-WP_169301477.1;Parent=gene-RM588_RS06970;Dbxref=GenBank:WP_169301477.1;Name=WP_169301477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500988.1;locus_tag=RM588_RS06970;product=SE1832 family protein;protein_id=WP_169301477.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	208784	209698	.	+	.	ID=gene-RM588_RS06975;Name=RM588_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06975;old_locus_tag=RM588_06970
NZ_JAVRJR010000003.1	Protein Homology	CDS	208784	209698	.	+	0	ID=cds-WP_037574803.1;Parent=gene-RM588_RS06975;Dbxref=GenBank:WP_037574803.1;Name=WP_037574803.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488634.1;locus_tag=RM588_RS06975;product=AEC family transporter;protein_id=WP_037574803.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	209737	210597	.	-	.	ID=gene-RM588_RS06980;Name=RM588_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06980;old_locus_tag=RM588_06975
NZ_JAVRJR010000003.1	Protein Homology	CDS	209737	210597	.	-	0	ID=cds-WP_311539516.1;Parent=gene-RM588_RS06980;Dbxref=GenBank:WP_311539516.1;Name=WP_311539516.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166615.1;locus_tag=RM588_RS06980;product=GNAT family N-acetyltransferase;protein_id=WP_311539516.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	210719	212851	.	+	.	ID=gene-RM588_RS06985;Name=RM588_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06985;old_locus_tag=RM588_06980
NZ_JAVRJR010000003.1	Protein Homology	CDS	210719	212851	.	+	0	ID=cds-WP_037574799.1;Parent=gene-RM588_RS06985;Dbxref=GenBank:WP_037574799.1;Name=WP_037574799.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838504.1;locus_tag=RM588_RS06985;product=DNA topoisomerase III;protein_id=WP_037574799.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	212963	214297	.	+	.	ID=gene-RM588_RS06990;Name=RM588_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS06990;old_locus_tag=RM588_06985
NZ_JAVRJR010000003.1	Protein Homology	CDS	212963	214297	.	+	0	ID=cds-WP_107363507.1;Parent=gene-RM588_RS06990;Dbxref=GenBank:WP_107363507.1;Name=WP_107363507.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=RM588_RS06990;product=NCS2 family permease;protein_id=WP_107363507.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	214759	215067	.	+	.	ID=gene-RM588_RS06995;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=RM588_RS06995;old_locus_tag=RM588_06990
NZ_JAVRJR010000003.1	Protein Homology	CDS	214759	215067	.	+	0	ID=cds-WP_001118667.1;Parent=gene-RM588_RS06995;Dbxref=GenBank:WP_001118667.1;Name=WP_001118667.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=RM588_RS06995;product=30S ribosomal protein S10;protein_id=WP_001118667.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	215095	215754	.	+	.	ID=gene-RM588_RS07000;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=RM588_RS07000;old_locus_tag=RM588_06995
NZ_JAVRJR010000003.1	Protein Homology	CDS	215095	215754	.	+	0	ID=cds-WP_037574795.1;Parent=gene-RM588_RS07000;Dbxref=GenBank:WP_037574795.1;Name=WP_037574795.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613212.1;locus_tag=RM588_RS07000;product=50S ribosomal protein L3;protein_id=WP_037574795.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	215781	216404	.	+	.	ID=gene-RM588_RS07005;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=RM588_RS07005;old_locus_tag=RM588_07000
NZ_JAVRJR010000003.1	Protein Homology	CDS	215781	216404	.	+	0	ID=cds-WP_037574793.1;Parent=gene-RM588_RS07005;Dbxref=GenBank:WP_037574793.1;Name=WP_037574793.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=RM588_RS07005;product=50S ribosomal protein L4;protein_id=WP_037574793.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	216404	216679	.	+	.	ID=gene-RM588_RS07010;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=RM588_RS07010;old_locus_tag=RM588_07005
NZ_JAVRJR010000003.1	Protein Homology	CDS	216404	216679	.	+	0	ID=cds-WP_037567103.1;Parent=gene-RM588_RS07010;Dbxref=GenBank:WP_037567103.1;Name=WP_037567103.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=RM588_RS07010;product=50S ribosomal protein L23;protein_id=WP_037567103.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	216709	217542	.	+	.	ID=gene-RM588_RS07015;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=RM588_RS07015;old_locus_tag=RM588_07010
NZ_JAVRJR010000003.1	Protein Homology	CDS	216709	217542	.	+	0	ID=cds-WP_037574791.1;Parent=gene-RM588_RS07015;Dbxref=GenBank:WP_037574791.1;Name=WP_037574791.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=RM588_RS07015;product=50S ribosomal protein L2;protein_id=WP_037574791.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	217607	217885	.	+	.	ID=gene-RM588_RS07020;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=RM588_RS07020;old_locus_tag=RM588_07015
NZ_JAVRJR010000003.1	Protein Homology	CDS	217607	217885	.	+	0	ID=cds-WP_014613216.1;Parent=gene-RM588_RS07020;Dbxref=GenBank:WP_014613216.1;Name=WP_014613216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=RM588_RS07020;product=30S ribosomal protein S19;protein_id=WP_014613216.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	217912	218265	.	+	.	ID=gene-RM588_RS07025;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=RM588_RS07025;old_locus_tag=RM588_07020
NZ_JAVRJR010000003.1	Protein Homology	CDS	217912	218265	.	+	0	ID=cds-WP_037574789.1;Parent=gene-RM588_RS07025;Dbxref=GenBank:WP_037574789.1;Name=WP_037574789.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=RM588_RS07025;product=50S ribosomal protein L22;protein_id=WP_037574789.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	218288	218941	.	+	.	ID=gene-RM588_RS07030;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=RM588_RS07030;old_locus_tag=RM588_07025
NZ_JAVRJR010000003.1	Protein Homology	CDS	218288	218941	.	+	0	ID=cds-WP_037574787.1;Parent=gene-RM588_RS07030;Dbxref=GenBank:WP_037574787.1;Name=WP_037574787.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=RM588_RS07030;product=30S ribosomal protein S3;protein_id=WP_037574787.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	218944	219378	.	+	.	ID=gene-RM588_RS07035;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=RM588_RS07035;old_locus_tag=RM588_07030
NZ_JAVRJR010000003.1	Protein Homology	CDS	218944	219378	.	+	0	ID=cds-WP_037567112.1;Parent=gene-RM588_RS07035;Dbxref=GenBank:WP_037567112.1;Name=WP_037567112.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=RM588_RS07035;product=50S ribosomal protein L16;protein_id=WP_037567112.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	219368	219577	.	+	.	ID=gene-RM588_RS07040;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=RM588_RS07040;old_locus_tag=RM588_07035
NZ_JAVRJR010000003.1	Protein Homology	CDS	219368	219577	.	+	0	ID=cds-WP_014613220.1;Parent=gene-RM588_RS07040;Dbxref=GenBank:WP_014613220.1;Name=WP_014613220.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=RM588_RS07040;product=50S ribosomal protein L29;protein_id=WP_014613220.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	219602	219865	.	+	.	ID=gene-RM588_RS07045;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=RM588_RS07045;old_locus_tag=RM588_07040
NZ_JAVRJR010000003.1	Protein Homology	CDS	219602	219865	.	+	0	ID=cds-WP_037567114.1;Parent=gene-RM588_RS07045;Dbxref=GenBank:WP_037567114.1;Name=WP_037567114.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=RM588_RS07045;product=30S ribosomal protein S17;protein_id=WP_037567114.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	219896	220264	.	+	.	ID=gene-RM588_RS07050;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=RM588_RS07050;old_locus_tag=RM588_07045
NZ_JAVRJR010000003.1	Protein Homology	CDS	219896	220264	.	+	0	ID=cds-WP_014613222.1;Parent=gene-RM588_RS07050;Dbxref=GenBank:WP_014613222.1;Name=WP_014613222.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=RM588_RS07050;product=50S ribosomal protein L14;protein_id=WP_014613222.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	220303	220620	.	+	.	ID=gene-RM588_RS07055;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=RM588_RS07055;old_locus_tag=RM588_07050
NZ_JAVRJR010000003.1	Protein Homology	CDS	220303	220620	.	+	0	ID=cds-WP_037567116.1;Parent=gene-RM588_RS07055;Dbxref=GenBank:WP_037567116.1;Name=WP_037567116.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911103.1;locus_tag=RM588_RS07055;product=50S ribosomal protein L24;protein_id=WP_037567116.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	220645	221184	.	+	.	ID=gene-RM588_RS07060;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=RM588_RS07060;old_locus_tag=RM588_07055
NZ_JAVRJR010000003.1	Protein Homology	CDS	220645	221184	.	+	0	ID=cds-WP_311539517.1;Parent=gene-RM588_RS07060;Dbxref=GenBank:WP_311539517.1;Name=WP_311539517.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=RM588_RS07060;product=50S ribosomal protein L5;protein_id=WP_311539517.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	221206	221391	.	+	.	ID=gene-RM588_RS07065;Name=RM588_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07065;old_locus_tag=RM588_07060
NZ_JAVRJR010000003.1	Protein Homology	CDS	221206	221391	.	+	0	ID=cds-WP_037574783.1;Parent=gene-RM588_RS07065;Dbxref=GenBank:WP_037574783.1;Name=WP_037574783.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=RM588_RS07065;product=type Z 30S ribosomal protein S14;protein_id=WP_037574783.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	221423	221821	.	+	.	ID=gene-RM588_RS07070;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=RM588_RS07070;old_locus_tag=RM588_07065
NZ_JAVRJR010000003.1	Protein Homology	CDS	221423	221821	.	+	0	ID=cds-WP_037574781.1;Parent=gene-RM588_RS07070;Dbxref=GenBank:WP_037574781.1;Name=WP_037574781.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=RM588_RS07070;product=30S ribosomal protein S8;protein_id=WP_037574781.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	221851	222387	.	+	.	ID=gene-RM588_RS07075;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=RM588_RS07075;old_locus_tag=RM588_07070
NZ_JAVRJR010000003.1	Protein Homology	CDS	221851	222387	.	+	0	ID=cds-WP_037567123.1;Parent=gene-RM588_RS07075;Dbxref=GenBank:WP_037567123.1;Name=WP_037567123.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=RM588_RS07075;product=50S ribosomal protein L6;protein_id=WP_037567123.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	222418	222777	.	+	.	ID=gene-RM588_RS07080;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=RM588_RS07080;old_locus_tag=RM588_07075
NZ_JAVRJR010000003.1	Protein Homology	CDS	222418	222777	.	+	0	ID=cds-WP_037574779.1;Parent=gene-RM588_RS07080;Dbxref=GenBank:WP_037574779.1;Name=WP_037574779.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500963.1;locus_tag=RM588_RS07080;product=50S ribosomal protein L18;protein_id=WP_037574779.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	222799	223299	.	+	.	ID=gene-RM588_RS07085;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=RM588_RS07085;old_locus_tag=RM588_07080
NZ_JAVRJR010000003.1	Protein Homology	CDS	222799	223299	.	+	0	ID=cds-WP_037574777.1;Parent=gene-RM588_RS07085;Dbxref=GenBank:WP_037574777.1;Name=WP_037574777.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=RM588_RS07085;product=30S ribosomal protein S5;protein_id=WP_037574777.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	223317	223496	.	+	.	ID=gene-RM588_RS07090;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=RM588_RS07090;old_locus_tag=RM588_07085
NZ_JAVRJR010000003.1	Protein Homology	CDS	223317	223496	.	+	0	ID=cds-WP_037574776.1;Parent=gene-RM588_RS07090;Dbxref=GenBank:WP_037574776.1;Name=WP_037574776.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=RM588_RS07090;product=50S ribosomal protein L30;protein_id=WP_037574776.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	223513	223953	.	+	.	ID=gene-RM588_RS07095;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=RM588_RS07095;old_locus_tag=RM588_07090
NZ_JAVRJR010000003.1	Protein Homology	CDS	223513	223953	.	+	0	ID=cds-WP_037574774.1;Parent=gene-RM588_RS07095;Dbxref=GenBank:WP_037574774.1;Name=WP_037574774.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=RM588_RS07095;product=50S ribosomal protein L15;protein_id=WP_037574774.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	223953	225245	.	+	.	ID=gene-RM588_RS07100;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=RM588_RS07100;old_locus_tag=RM588_07095
NZ_JAVRJR010000003.1	Protein Homology	CDS	223953	225245	.	+	0	ID=cds-WP_037574771.1;Parent=gene-RM588_RS07100;Dbxref=GenBank:WP_037574771.1;Name=WP_037574771.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=RM588_RS07100;product=preprotein translocase subunit SecY;protein_id=WP_037574771.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	225263	225913	.	+	.	ID=gene-RM588_RS07105;Name=RM588_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07105;old_locus_tag=RM588_07100
NZ_JAVRJR010000003.1	Protein Homology	CDS	225263	225913	.	+	0	ID=cds-WP_037574768.1;Parent=gene-RM588_RS07105;Dbxref=GenBank:WP_037574768.1;Name=WP_037574768.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448556.1;locus_tag=RM588_RS07105;product=adenylate kinase;protein_id=WP_037574768.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	226081	226299	.	+	.	ID=gene-RM588_RS07110;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=RM588_RS07110;old_locus_tag=RM588_07105
NZ_JAVRJR010000003.1	Protein Homology	CDS	226081	226299	.	+	0	ID=cds-WP_001118443.1;Parent=gene-RM588_RS07110;Dbxref=GenBank:WP_001118443.1;Name=WP_001118443.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=RM588_RS07110;product=translation initiation factor IF-1;protein_id=WP_001118443.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	226332	226445	.	+	.	ID=gene-RM588_RS07115;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=RM588_RS07115;old_locus_tag=RM588_07110
NZ_JAVRJR010000003.1	Protein Homology	CDS	226332	226445	.	+	0	ID=cds-WP_002509257.1;Parent=gene-RM588_RS07115;Dbxref=GenBank:WP_002509257.1;Name=WP_002509257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=RM588_RS07115;product=50S ribosomal protein L36;protein_id=WP_002509257.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	226468	226833	.	+	.	ID=gene-RM588_RS07120;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=RM588_RS07120;old_locus_tag=RM588_07115
NZ_JAVRJR010000003.1	Protein Homology	CDS	226468	226833	.	+	0	ID=cds-WP_037574765.1;Parent=gene-RM588_RS07120;Dbxref=GenBank:WP_037574765.1;Name=WP_037574765.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=RM588_RS07120;product=30S ribosomal protein S13;protein_id=WP_037574765.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	226858	227247	.	+	.	ID=gene-RM588_RS07125;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=RM588_RS07125;old_locus_tag=RM588_07120
NZ_JAVRJR010000003.1	Protein Homology	CDS	226858	227247	.	+	0	ID=cds-WP_014613235.1;Parent=gene-RM588_RS07125;Dbxref=GenBank:WP_014613235.1;Name=WP_014613235.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=RM588_RS07125;product=30S ribosomal protein S11;protein_id=WP_014613235.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	227331	228275	.	+	.	ID=gene-RM588_RS07130;Name=RM588_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07130;old_locus_tag=RM588_07125
NZ_JAVRJR010000003.1	Protein Homology	CDS	227331	228275	.	+	0	ID=cds-WP_037574762.1;Parent=gene-RM588_RS07130;Dbxref=GenBank:WP_037574762.1;Name=WP_037574762.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=RM588_RS07130;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_037574762.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	228292	228660	.	+	.	ID=gene-RM588_RS07135;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=RM588_RS07135;old_locus_tag=RM588_07130
NZ_JAVRJR010000003.1	Protein Homology	CDS	228292	228660	.	+	0	ID=cds-WP_037574759.1;Parent=gene-RM588_RS07135;Dbxref=GenBank:WP_037574759.1;Name=WP_037574759.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=RM588_RS07135;product=50S ribosomal protein L17;protein_id=WP_037574759.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	229028	229831	.	+	.	ID=gene-RM588_RS07140;Name=RM588_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07140;old_locus_tag=RM588_07135
NZ_JAVRJR010000003.1	Protein Homology	CDS	229028	229831	.	+	0	ID=cds-WP_037574756.1;Parent=gene-RM588_RS07140;Dbxref=GenBank:WP_037574756.1;Name=WP_037574756.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506987.1;locus_tag=RM588_RS07140;product=energy-coupling factor transporter ATPase;protein_id=WP_037574756.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	229828	230694	.	+	.	ID=gene-RM588_RS07145;Name=RM588_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07145;old_locus_tag=RM588_07140
NZ_JAVRJR010000003.1	Protein Homology	CDS	229828	230694	.	+	0	ID=cds-WP_037574753.1;Parent=gene-RM588_RS07145;Dbxref=GenBank:WP_037574753.1;Name=WP_037574753.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167911.1;locus_tag=RM588_RS07145;product=energy-coupling factor transporter ATPase;protein_id=WP_037574753.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	230684	231487	.	+	.	ID=gene-RM588_RS07150;Name=RM588_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07150;old_locus_tag=RM588_07145
NZ_JAVRJR010000003.1	Protein Homology	CDS	230684	231487	.	+	0	ID=cds-WP_037574751.1;Parent=gene-RM588_RS07150;Dbxref=GenBank:WP_037574751.1;Name=WP_037574751.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638503.1;locus_tag=RM588_RS07150;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_037574751.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	231502	232332	.	+	.	ID=gene-RM588_RS07155;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=RM588_RS07155;old_locus_tag=RM588_07150
NZ_JAVRJR010000003.1	Protein Homology	CDS	231502	232332	.	+	0	ID=cds-WP_103158739.1;Parent=gene-RM588_RS07155;Dbxref=GenBank:WP_103158739.1;Name=WP_103158739.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506990.1;locus_tag=RM588_RS07155;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_103158739.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	232521	232958	.	+	.	ID=gene-RM588_RS07160;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=RM588_RS07160;old_locus_tag=RM588_07155
NZ_JAVRJR010000003.1	Protein Homology	CDS	232521	232958	.	+	0	ID=cds-WP_037574745.1;Parent=gene-RM588_RS07160;Dbxref=GenBank:WP_037574745.1;Name=WP_037574745.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=RM588_RS07160;product=50S ribosomal protein L13;protein_id=WP_037574745.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	232978	233370	.	+	.	ID=gene-RM588_RS07165;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=RM588_RS07165;old_locus_tag=RM588_07160
NZ_JAVRJR010000003.1	Protein Homology	CDS	232978	233370	.	+	0	ID=cds-WP_037542446.1;Parent=gene-RM588_RS07165;Dbxref=GenBank:WP_037542446.1;Name=WP_037542446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=RM588_RS07165;product=30S ribosomal protein S9;protein_id=WP_037542446.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	234086	234838	.	+	.	ID=gene-RM588_RS07170;Name=RM588_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07170;old_locus_tag=RM588_07165
NZ_JAVRJR010000003.1	Protein Homology	CDS	234086	234838	.	+	0	ID=cds-WP_037574742.1;Parent=gene-RM588_RS07170;Dbxref=GenBank:WP_037574742.1;Name=WP_037574742.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613252.1;locus_tag=RM588_RS07170;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_037574742.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	235079	235507	.	+	.	ID=gene-RM588_RS07175;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=RM588_RS07175;old_locus_tag=RM588_07170
NZ_JAVRJR010000003.1	Protein Homology	CDS	235079	235507	.	+	0	ID=cds-WP_037574739.1;Parent=gene-RM588_RS07175;Dbxref=GenBank:WP_037574739.1;Name=WP_037574739.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=RM588_RS07175;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_037574739.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	235523	236038	.	+	.	ID=gene-RM588_RS07180;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=RM588_RS07180;old_locus_tag=RM588_07175
NZ_JAVRJR010000003.1	Protein Homology	CDS	235523	236038	.	+	0	ID=cds-WP_262621628.1;Parent=gene-RM588_RS07180;Dbxref=GenBank:WP_262621628.1;Name=WP_262621628.1;Ontology_term=GO:0005990,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=RM588_RS07180;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_262621628.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	236141	237112	.	+	.	ID=gene-RM588_RS07185;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=RM588_RS07185;old_locus_tag=RM588_07180
NZ_JAVRJR010000003.1	Protein Homology	CDS	236141	237112	.	+	0	ID=cds-WP_311539518.1;Parent=gene-RM588_RS07185;Dbxref=GenBank:WP_311539518.1;Name=WP_311539518.1;Ontology_term=GO:0005990,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729497.1;locus_tag=RM588_RS07185;product=tagatose-bisphosphate aldolase;protein_id=WP_311539518.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	237143	237457	.	+	.	ID=gene-RM588_RS07190;Name=RM588_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07190;old_locus_tag=RM588_07185
NZ_JAVRJR010000003.1	Protein Homology	CDS	237143	237457	.	+	0	ID=cds-WP_037574730.1;Parent=gene-RM588_RS07190;Dbxref=GenBank:WP_037574730.1;Name=WP_037574730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263056.1;locus_tag=RM588_RS07190;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_037574730.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	237463	239211	.	+	.	ID=gene-RM588_RS07195;Name=RM588_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07195;old_locus_tag=RM588_07190
NZ_JAVRJR010000003.1	Protein Homology	CDS	237463	239211	.	+	0	ID=cds-WP_311541374.1;Parent=gene-RM588_RS07195;Dbxref=GenBank:WP_311541374.1;Name=WP_311541374.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613257.1;locus_tag=RM588_RS07195;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_311541374.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	239227	240630	.	+	.	ID=gene-RM588_RS07200;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=RM588_RS07200;old_locus_tag=RM588_07195
NZ_JAVRJR010000003.1	Protein Homology	CDS	239227	240630	.	+	0	ID=cds-WP_037574726.1;Parent=gene-RM588_RS07200;Dbxref=GenBank:WP_037574726.1;Name=WP_037574726.1;Ontology_term=GO:0005990,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process|0005990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275160.1;locus_tag=RM588_RS07200;product=6-phospho-beta-galactosidase;protein_id=WP_037574726.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	240899	241906	.	+	.	ID=gene-RM588_RS07205;Name=RM588_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07205;old_locus_tag=RM588_07200
NZ_JAVRJR010000003.1	Protein Homology	CDS	240899	241906	.	+	0	ID=cds-WP_103158742.1;Parent=gene-RM588_RS07205;Dbxref=GenBank:WP_103158742.1;Name=WP_103158742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220315.1;locus_tag=RM588_RS07205;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_103158742.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	241984	243510	.	+	.	ID=gene-RM588_RS07210;Name=RM588_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07210;old_locus_tag=RM588_07205
NZ_JAVRJR010000003.1	Protein Homology	CDS	241984	243510	.	+	0	ID=cds-WP_037574720.1;Parent=gene-RM588_RS07210;Dbxref=GenBank:WP_037574720.1;Name=WP_037574720.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900934.1;locus_tag=RM588_RS07210;product=BCCT family transporter;protein_id=WP_037574720.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	243774	244103	.	+	.	ID=gene-RM588_RS07215;Name=RM588_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07215;old_locus_tag=RM588_07210
NZ_JAVRJR010000003.1	GeneMarkS-2+	CDS	243774	244103	.	+	0	ID=cds-WP_103159485.1;Parent=gene-RM588_RS07215;Dbxref=GenBank:WP_103159485.1;Name=WP_103159485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07215;product=hypothetical protein;protein_id=WP_103159485.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	244162	245313	.	-	.	ID=gene-RM588_RS07220;Name=RM588_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07220;old_locus_tag=RM588_07215
NZ_JAVRJR010000003.1	Protein Homology	CDS	244162	245313	.	-	0	ID=cds-WP_037574714.1;Parent=gene-RM588_RS07220;Dbxref=GenBank:WP_037574714.1;Name=WP_037574714.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426390.1;locus_tag=RM588_RS07220;product=MFS transporter;protein_id=WP_037574714.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	245453	247399	.	-	.	ID=gene-RM588_RS07225;Name=RM588_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07225;old_locus_tag=RM588_07220
NZ_JAVRJR010000003.1	Protein Homology	CDS	245453	247399	.	-	0	ID=cds-WP_311541375.1;Parent=gene-RM588_RS07225;Dbxref=GenBank:WP_311541375.1;Name=WP_311541375.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455026.1;locus_tag=RM588_RS07225;product=IucA/IucC family protein;protein_id=WP_311541375.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	247501	248667	.	+	.	ID=gene-RM588_RS07230;Name=RM588_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07230;old_locus_tag=RM588_07225
NZ_JAVRJR010000003.1	Protein Homology	CDS	247501	248667	.	+	0	ID=cds-WP_037574708.1;Parent=gene-RM588_RS07230;Dbxref=GenBank:WP_037574708.1;Name=WP_037574708.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302621.1;locus_tag=RM588_RS07230;product=MFS transporter;protein_id=WP_037574708.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	248669	250432	.	+	.	ID=gene-RM588_RS07235;Name=RM588_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07235;old_locus_tag=RM588_07230
NZ_JAVRJR010000003.1	Protein Homology	CDS	248669	250432	.	+	0	ID=cds-WP_107366045.1;Parent=gene-RM588_RS07235;Dbxref=GenBank:WP_107366045.1;Name=WP_107366045.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613271.1;locus_tag=RM588_RS07235;product=IucA/IucC family protein;protein_id=WP_107366045.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	250436	251506	.	+	.	ID=gene-RM588_RS07240;Name=RM588_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07240;old_locus_tag=RM588_07235
NZ_JAVRJR010000003.1	Protein Homology	CDS	250436	251506	.	+	0	ID=cds-WP_107366044.1;Parent=gene-RM588_RS07240;Dbxref=GenBank:WP_107366044.1;Name=WP_107366044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613272.1;locus_tag=RM588_RS07240;product=alanine racemase;protein_id=WP_107366044.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	251580	252557	.	+	.	ID=gene-RM588_RS07245;Name=RM588_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07245;old_locus_tag=RM588_07240
NZ_JAVRJR010000003.1	Protein Homology	CDS	251580	252557	.	+	0	ID=cds-WP_037575241.1;Parent=gene-RM588_RS07245;Dbxref=GenBank:WP_037575241.1;Name=WP_037575241.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722966.1;locus_tag=RM588_RS07245;product=ABC transporter substrate-binding protein;protein_id=WP_037575241.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	252603	253628	.	+	.	ID=gene-RM588_RS07250;Name=RM588_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07250;old_locus_tag=RM588_07245
NZ_JAVRJR010000003.1	Protein Homology	CDS	252603	253628	.	+	0	ID=cds-WP_037574700.1;Parent=gene-RM588_RS07250;Dbxref=GenBank:WP_037574700.1;Name=WP_037574700.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364803.1;locus_tag=RM588_RS07250;product=FecCD family ABC transporter permease;protein_id=WP_037574700.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	253625	254587	.	+	.	ID=gene-RM588_RS07255;Name=RM588_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07255;old_locus_tag=RM588_07250
NZ_JAVRJR010000003.1	Protein Homology	CDS	253625	254587	.	+	0	ID=cds-WP_105963147.1;Parent=gene-RM588_RS07255;Dbxref=GenBank:WP_105963147.1;Name=WP_105963147.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384837.1;locus_tag=RM588_RS07255;product=FecCD family ABC transporter permease;protein_id=WP_105963147.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	254689	254949	.	-	.	ID=gene-RM588_RS07260;Name=RM588_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07260;old_locus_tag=RM588_07255
NZ_JAVRJR010000003.1	Protein Homology	CDS	254689	254949	.	-	0	ID=cds-WP_037574694.1;Parent=gene-RM588_RS07260;Dbxref=GenBank:WP_037574694.1;Name=WP_037574694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500896.1;locus_tag=RM588_RS07260;product=SunI/YnzG family protein;protein_id=WP_037574694.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	255137	255640	.	+	.	ID=gene-RM588_RS07265;Name=RM588_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07265;old_locus_tag=RM588_07260
NZ_JAVRJR010000003.1	Protein Homology	CDS	255137	255640	.	+	0	ID=cds-WP_037574691.1;Parent=gene-RM588_RS07265;Dbxref=GenBank:WP_037574691.1;Name=WP_037574691.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613278.1;locus_tag=RM588_RS07265;product=metal-dependent hydrolase;protein_id=WP_037574691.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	255691	256881	.	+	.	ID=gene-RM588_RS07270;Name=RM588_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07270;old_locus_tag=RM588_07265
NZ_JAVRJR010000003.1	Protein Homology	CDS	255691	256881	.	+	0	ID=cds-WP_037574688.1;Parent=gene-RM588_RS07270;Dbxref=GenBank:WP_037574688.1;Name=WP_037574688.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165085.1;locus_tag=RM588_RS07270;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_037574688.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	256892	257578	.	+	.	ID=gene-RM588_RS07275;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=RM588_RS07275;old_locus_tag=RM588_07270
NZ_JAVRJR010000003.1	Protein Homology	CDS	256892	257578	.	+	0	ID=cds-WP_103159482.1;Parent=gene-RM588_RS07275;Dbxref=GenBank:WP_103159482.1;Name=WP_103159482.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047256.1;locus_tag=RM588_RS07275;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_103159482.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	257891	259225	.	+	.	ID=gene-RM588_RS07280;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=RM588_RS07280;old_locus_tag=RM588_07275
NZ_JAVRJR010000003.1	Protein Homology	CDS	257891	259225	.	+	0	ID=cds-WP_103159481.1;Parent=gene-RM588_RS07280;Dbxref=GenBank:WP_103159481.1;Name=WP_103159481.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482666.1;locus_tag=RM588_RS07280;product=multidrug efflux MFS transporter SdrM;protein_id=WP_103159481.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	259266	259733	.	+	.	ID=gene-RM588_RS07285;Name=RM588_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07285;old_locus_tag=RM588_07280
NZ_JAVRJR010000003.1	Protein Homology	CDS	259266	259733	.	+	0	ID=cds-WP_037574677.1;Parent=gene-RM588_RS07285;Dbxref=GenBank:WP_037574677.1;Name=WP_037574677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426405.1;locus_tag=RM588_RS07285;product=SepA family multidrug efflux transporter;protein_id=WP_037574677.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	260079	261515	.	+	.	ID=gene-RM588_RS07290;Name=RM588_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07290;old_locus_tag=RM588_07285
NZ_JAVRJR010000003.1	Protein Homology	CDS	260079	261515	.	+	0	ID=cds-WP_311541378.1;Parent=gene-RM588_RS07290;Dbxref=GenBank:WP_311541378.1;Name=WP_311541378.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384823.1;locus_tag=RM588_RS07290;product=MDR family MFS transporter;protein_id=WP_311541378.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	261608	262672	.	+	.	ID=gene-RM588_RS07295;Name=salA;gbkey=Gene;gene=salA;gene_biotype=protein_coding;locus_tag=RM588_RS07295;old_locus_tag=RM588_07290
NZ_JAVRJR010000003.1	Protein Homology	CDS	261608	262672	.	+	0	ID=cds-WP_037574671.1;Parent=gene-RM588_RS07295;Dbxref=GenBank:WP_037574671.1;Name=WP_037574671.1;gbkey=CDS;gene=salA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=RM588_RS07295;product=iron-sulfur carrier protein/transcriptional regulator SalA;protein_id=WP_037574671.1;transl_table=11
NZ_JAVRJR010000003.1	RefSeq	gene	263318	263679	.	+	.	ID=gene-RM588_RS07300;Name=RM588_RS07300;end_range=263679,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM588_RS07300;old_locus_tag=RM588_07295;partial=true
NZ_JAVRJR010000003.1	cmsearch	rRNA	263318	263679	.	+	.	ID=rna-RM588_RS07300;Parent=gene-RM588_RS07300;Dbxref=RFAM:RF00177;end_range=263679,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS07300;partial=true;product=16S ribosomal RNA
NZ_JAVRJR010000003.1	cmsearch	exon	263318	263679	.	+	.	ID=exon-RM588_RS07300-1;Parent=rna-RM588_RS07300;Dbxref=RFAM:RF00177;end_range=263679,.;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS07300;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JAVRJR010000004.1 1 176158
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000004.1	RefSeq	region	1	176158	.	+	.	ID=NZ_JAVRJR010000004.1:1..176158;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000004.1	RefSeq	gene	133	1551	.	-	.	ID=gene-RM588_RS07305;Name=RM588_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07305;old_locus_tag=RM588_07300
NZ_JAVRJR010000004.1	Protein Homology	CDS	133	1551	.	-	0	ID=cds-WP_031920597.1;Parent=gene-RM588_RS07305;Dbxref=GenBank:WP_031920597.1;Name=WP_031920597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.7;locus_tag=RM588_RS07305;product=RNA-binding domain-containing protein;protein_id=WP_031920597.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	1698	3236	.	+	.	ID=gene-RM588_RS07310;Name=RM588_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07310;old_locus_tag=RM588_07305
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	1698	3236	.	+	0	ID=cds-WP_031920596.1;Parent=gene-RM588_RS07310;Dbxref=GenBank:WP_031920596.1;Name=WP_031920596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07310;product=hypothetical protein;protein_id=WP_031920596.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	3469	3708	.	+	.	ID=gene-RM588_RS07315;Name=RM588_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07315;old_locus_tag=RM588_07310
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	3469	3708	.	+	0	ID=cds-WP_031920595.1;Parent=gene-RM588_RS07315;Dbxref=GenBank:WP_031920595.1;Name=WP_031920595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07315;product=hypothetical protein;protein_id=WP_031920595.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	3734	5521	.	+	.	ID=gene-RM588_RS07320;Name=cch1;gbkey=Gene;gene=cch1;gene_biotype=protein_coding;locus_tag=RM588_RS07320;old_locus_tag=RM588_07315
NZ_JAVRJR010000004.1	Protein Homology	CDS	3734	5521	.	+	0	ID=cds-WP_031920594.1;Parent=gene-RM588_RS07320;Dbxref=GenBank:WP_031920594.1;Name=WP_031920594.1;Ontology_term=GO:0043138;gbkey=CDS;gene=cch1;go_function=3'-5' DNA helicase activity|0043138||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181742.1;locus_tag=RM588_RS07320;product=cassette chromosome replicative helicase;protein_id=WP_031920594.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	5590	5865	.	+	.	ID=gene-RM588_RS07325;Name=RM588_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07325;old_locus_tag=RM588_07320
NZ_JAVRJR010000004.1	Protein Homology	CDS	5590	5865	.	+	0	ID=cds-WP_031920593.1;Parent=gene-RM588_RS07325;Dbxref=GenBank:WP_031920593.1;Name=WP_031920593.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100996.1;locus_tag=RM588_RS07325;product=recombinase family protein;protein_id=WP_031920593.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	6057	7406	.	+	.	ID=gene-RM588_RS07330;Name=ccrA;gbkey=Gene;gene=ccrA;gene_biotype=protein_coding;locus_tag=RM588_RS07330;old_locus_tag=RM588_07325
NZ_JAVRJR010000004.1	Protein Homology	CDS	6057	7406	.	+	0	ID=cds-WP_031920592.1;Parent=gene-RM588_RS07330;Dbxref=GenBank:WP_031920592.1;Name=WP_031920592.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrA;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=RM588_RS07330;product=cassette chromosome recombinase CcrA;protein_id=WP_031920592.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	7427	9055	.	+	.	ID=gene-RM588_RS07335;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=RM588_RS07335;old_locus_tag=RM588_07330
NZ_JAVRJR010000004.1	Protein Homology	CDS	7427	9055	.	+	0	ID=cds-WP_311548117.1;Parent=gene-RM588_RS07335;Dbxref=GenBank:WP_311548117.1;Name=WP_311548117.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrB;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186610.1;locus_tag=RM588_RS07335;product=cassette chromosome recombinase CcrB;protein_id=WP_311548117.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	9592	10521	.	+	.	ID=gene-RM588_RS07340;Name=RM588_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07340;old_locus_tag=RM588_07335
NZ_JAVRJR010000004.1	Protein Homology	CDS	9592	10521	.	+	0	ID=cds-WP_002506256.1;Parent=gene-RM588_RS07340;Dbxref=GenBank:WP_002506256.1;Name=WP_002506256.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506256.1;locus_tag=RM588_RS07340;product=ketopantoate reductase family protein;protein_id=WP_002506256.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	11088	11438	.	+	.	ID=gene-RM588_RS07345;Name=RM588_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07345;old_locus_tag=RM588_07340
NZ_JAVRJR010000004.1	Protein Homology	CDS	11088	11438	.	+	0	ID=cds-WP_150868191.1;Parent=gene-RM588_RS07345;Dbxref=GenBank:WP_150868191.1;Name=WP_150868191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171449.1;locus_tag=RM588_RS07345;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WP_150868191.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	11523	11834	.	+	.	ID=gene-RM588_RS07350;Name=RM588_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07350;old_locus_tag=RM588_07345
NZ_JAVRJR010000004.1	Protein Homology	CDS	11523	11834	.	+	0	ID=cds-WP_069855724.1;Parent=gene-RM588_RS07350;Dbxref=GenBank:WP_069855724.1;Name=WP_069855724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833212.1;locus_tag=RM588_RS07350;product=DUF960 family protein;protein_id=WP_069855724.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	11850	12362	.	+	.	ID=gene-RM588_RS07355;Name=RM588_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07355;old_locus_tag=RM588_07350
NZ_JAVRJR010000004.1	Protein Homology	CDS	11850	12362	.	+	0	ID=cds-WP_150868190.1;Parent=gene-RM588_RS07355;Dbxref=GenBank:WP_150868190.1;Name=WP_150868190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464571.1;locus_tag=RM588_RS07355;product=DUF1643 domain-containing protein;protein_id=WP_150868190.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	12462	13064	.	+	.	ID=gene-RM588_RS07360;Name=RM588_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07360;old_locus_tag=RM588_07355
NZ_JAVRJR010000004.1	Protein Homology	CDS	12462	13064	.	+	0	ID=cds-WP_150868189.1;Parent=gene-RM588_RS07360;Dbxref=GenBank:WP_150868189.1;Name=WP_150868189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717928.1;locus_tag=RM588_RS07360;product=hypothetical protein;protein_id=WP_150868189.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	13085	13573	.	+	.	ID=gene-RM588_RS07365;Name=RM588_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07365;old_locus_tag=RM588_07360
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	13085	13573	.	+	0	ID=cds-WP_311548120.1;Parent=gene-RM588_RS07365;Dbxref=GenBank:WP_311548120.1;Name=WP_311548120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07365;product=type II secretion system protein;protein_id=WP_311548120.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	13638	16760	.	-	.	ID=gene-RM588_RS07370;Name=RM588_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07370;old_locus_tag=RM588_07365
NZ_JAVRJR010000004.1	Protein Homology	CDS	13638	16760	.	-	0	ID=cds-WP_311548121.1;Parent=gene-RM588_RS07370;Dbxref=GenBank:WP_311548121.1;Name=WP_311548121.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505894.1;locus_tag=RM588_RS07370;product=type I restriction endonuclease subunit R;protein_id=WP_311548121.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	16744	17943	.	-	.	ID=gene-RM588_RS07375;Name=RM588_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07375;old_locus_tag=RM588_07370
NZ_JAVRJR010000004.1	Protein Homology	CDS	16744	17943	.	-	0	ID=cds-WP_311548122.1;Parent=gene-RM588_RS07375;Dbxref=GenBank:WP_311548122.1;Name=WP_311548122.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274409.1;locus_tag=RM588_RS07375;product=restriction endonuclease subunit S;protein_id=WP_311548122.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	17933	19447	.	-	.	ID=gene-RM588_RS07380;Name=RM588_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07380;old_locus_tag=RM588_07375
NZ_JAVRJR010000004.1	Protein Homology	CDS	17933	19447	.	-	0	ID=cds-WP_311548123.1;Parent=gene-RM588_RS07380;Dbxref=GenBank:WP_311548123.1;Name=WP_311548123.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:0009007,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175164.1;locus_tag=RM588_RS07380;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_311548123.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	19487	19963	.	-	.	ID=gene-RM588_RS07385;Name=RM588_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07385;old_locus_tag=RM588_07380
NZ_JAVRJR010000004.1	Protein Homology	CDS	19487	19963	.	-	0	ID=cds-WP_311548124.1;Parent=gene-RM588_RS07385;Dbxref=GenBank:WP_311548124.1;Name=WP_311548124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670222.1;locus_tag=RM588_RS07385;product=Pycsar system effector family protein;protein_id=WP_311548124.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	19969	21237	.	-	.	ID=gene-RM588_RS07390;Name=RM588_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07390;old_locus_tag=RM588_07385
NZ_JAVRJR010000004.1	Protein Homology	CDS	19969	21237	.	-	0	ID=cds-WP_311548125.1;Parent=gene-RM588_RS07390;Dbxref=GenBank:WP_311548125.1;Name=WP_311548125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368660.1;locus_tag=RM588_RS07390;product=nucleotide-binding domain-containing protein;protein_id=WP_311548125.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	21327	21806	.	-	.	ID=gene-RM588_RS07395;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=RM588_RS07395;old_locus_tag=RM588_07390
NZ_JAVRJR010000004.1	Protein Homology	CDS	21327	21806	.	-	0	ID=cds-WP_037575283.1;Parent=gene-RM588_RS07395;Dbxref=GenBank:WP_037575283.1;Name=WP_037575283.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=RM588_RS07395;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_037575283.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	pseudogene	22590	23861	.	-	.	ID=gene-RM588_RS07400;Name=RM588_RS07400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS07400;old_locus_tag=RM588_07395;pseudo=true
NZ_JAVRJR010000004.1	Protein Homology	CDS	22590	23861	.	-	0	ID=cds-RM588_RS07400;Parent=gene-RM588_RS07400;Note=frameshifted;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174746.1;locus_tag=RM588_RS07400;product=arsenic transporter;pseudo=true;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	23994	24776	.	-	.	ID=gene-RM588_RS07405;Name=RM588_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07405;old_locus_tag=RM588_07400
NZ_JAVRJR010000004.1	Protein Homology	CDS	23994	24776	.	-	0	ID=cds-WP_105967344.1;Parent=gene-RM588_RS07405;Dbxref=GenBank:WP_105967344.1;Name=WP_105967344.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834686.1;locus_tag=RM588_RS07405;product=MBL fold metallo-hydrolase;protein_id=WP_105967344.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	24802	25578	.	-	.	ID=gene-RM588_RS07410;Name=RM588_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07410;old_locus_tag=RM588_07405
NZ_JAVRJR010000004.1	Protein Homology	CDS	24802	25578	.	-	0	ID=cds-WP_103159116.1;Parent=gene-RM588_RS07410;Dbxref=GenBank:WP_103159116.1;Name=WP_103159116.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612684.1;locus_tag=RM588_RS07410;product=two-component system regulatory protein YycI;protein_id=WP_103159116.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	25575	26912	.	-	.	ID=gene-RM588_RS07415;Name=RM588_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07415;old_locus_tag=RM588_07410
NZ_JAVRJR010000004.1	Protein Homology	CDS	25575	26912	.	-	0	ID=cds-WP_037575291.1;Parent=gene-RM588_RS07415;Dbxref=GenBank:WP_037575291.1;Name=WP_037575291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612683.1;locus_tag=RM588_RS07415;product=YycH family regulatory protein;protein_id=WP_037575291.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	26902	28734	.	-	.	ID=gene-RM588_RS07420;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=RM588_RS07420;old_locus_tag=RM588_07415
NZ_JAVRJR010000004.1	Protein Homology	CDS	26902	28734	.	-	0	ID=cds-WP_037575294.1;Parent=gene-RM588_RS07420;Dbxref=GenBank:WP_037575294.1;Name=WP_037575294.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274376.1;locus_tag=RM588_RS07420;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_037575294.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	28750	29451	.	-	.	ID=gene-RM588_RS07425;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=RM588_RS07425;old_locus_tag=RM588_07420
NZ_JAVRJR010000004.1	Protein Homology	CDS	28750	29451	.	-	0	ID=cds-WP_037575295.1;Parent=gene-RM588_RS07425;Dbxref=GenBank:WP_037575295.1;Name=WP_037575295.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=RM588_RS07425;product=response regulator YycF;protein_id=WP_037575295.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	29699	29772	.	-	.	ID=gene-RM588_RS07430;Name=RM588_RS07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS07430;old_locus_tag=RM588_07425
NZ_JAVRJR010000004.1	tRNAscan-SE	tRNA	29699	29772	.	-	.	ID=rna-RM588_RS07430;Parent=gene-RM588_RS07430;anticodon=(pos:complement(29736..29738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS07430;product=tRNA-Asp
NZ_JAVRJR010000004.1	tRNAscan-SE	exon	29699	29772	.	-	.	ID=exon-RM588_RS07430-1;Parent=rna-RM588_RS07430;anticodon=(pos:complement(29736..29738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS07430;product=tRNA-Asp
NZ_JAVRJR010000004.1	RefSeq	gene	29779	29853	.	-	.	ID=gene-RM588_RS07435;Name=RM588_RS07435;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS07435;old_locus_tag=RM588_07430
NZ_JAVRJR010000004.1	tRNAscan-SE	tRNA	29779	29853	.	-	.	ID=rna-RM588_RS07435;Parent=gene-RM588_RS07435;anticodon=(pos:complement(29818..29820));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS07435;product=tRNA-Glu
NZ_JAVRJR010000004.1	tRNAscan-SE	exon	29779	29853	.	-	.	ID=exon-RM588_RS07435-1;Parent=rna-RM588_RS07435;anticodon=(pos:complement(29818..29820));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS07435;product=tRNA-Glu
NZ_JAVRJR010000004.1	RefSeq	gene	30137	30427	.	+	.	ID=gene-RM588_RS07440;Name=RM588_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07440;old_locus_tag=RM588_07435
NZ_JAVRJR010000004.1	Protein Homology	CDS	30137	30427	.	+	0	ID=cds-WP_375713817.1;Parent=gene-RM588_RS07440;Dbxref=GenBank:WP_375713817.1;Name=WP_375713817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425747.1;locus_tag=RM588_RS07440;product=YrhK family protein;protein_id=WP_375713817.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	30505	31791	.	-	.	ID=gene-RM588_RS07445;Name=RM588_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07445;old_locus_tag=RM588_07440
NZ_JAVRJR010000004.1	Protein Homology	CDS	30505	31791	.	-	0	ID=cds-WP_037575297.1;Parent=gene-RM588_RS07445;Dbxref=GenBank:WP_037575297.1;Name=WP_037575297.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=RM588_RS07445;product=adenylosuccinate synthase;protein_id=WP_037575297.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	32082	33482	.	-	.	ID=gene-RM588_RS07450;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM588_RS07450;old_locus_tag=RM588_07445
NZ_JAVRJR010000004.1	Protein Homology	CDS	32082	33482	.	-	0	ID=cds-WP_105966000.1;Parent=gene-RM588_RS07450;Dbxref=GenBank:WP_105966000.1;Name=WP_105966000.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612677.1;locus_tag=RM588_RS07450;product=replicative DNA helicase;protein_id=WP_105966000.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	33628	34074	.	-	.	ID=gene-RM588_RS07455;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=RM588_RS07455;old_locus_tag=RM588_07450
NZ_JAVRJR010000004.1	Protein Homology	CDS	33628	34074	.	-	0	ID=cds-WP_037575300.1;Parent=gene-RM588_RS07455;Dbxref=GenBank:WP_037575300.1;Name=WP_037575300.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=RM588_RS07455;product=50S ribosomal protein L9;protein_id=WP_037575300.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	34071	36038	.	-	.	ID=gene-RM588_RS07460;Name=RM588_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07460;old_locus_tag=RM588_07455
NZ_JAVRJR010000004.1	Protein Homology	CDS	34071	36038	.	-	0	ID=cds-WP_037575301.1;Parent=gene-RM588_RS07460;Dbxref=GenBank:WP_037575301.1;Name=WP_037575301.1;Ontology_term=GO:0016772,GO:0016787,GO:0046872;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=RM588_RS07460;product=DHH family phosphoesterase;protein_id=WP_037575301.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	36050	36955	.	-	.	ID=gene-RM588_RS07465;Name=RM588_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07465;old_locus_tag=RM588_07460
NZ_JAVRJR010000004.1	Protein Homology	CDS	36050	36955	.	-	0	ID=cds-WP_037575303.1;Parent=gene-RM588_RS07465;Dbxref=GenBank:WP_037575303.1;Name=WP_037575303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729827.1;locus_tag=RM588_RS07465;product=DUF2232 domain-containing protein;protein_id=WP_037575303.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	37290	38255	.	-	.	ID=gene-RM588_RS07470;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=RM588_RS07470;old_locus_tag=RM588_07465
NZ_JAVRJR010000004.1	Protein Homology	CDS	37290	38255	.	-	0	ID=cds-WP_037575305.1;Parent=gene-RM588_RS07470;Dbxref=GenBank:WP_037575305.1;Name=WP_037575305.1;Ontology_term=GO:0071265,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612673.1;locus_tag=RM588_RS07470;product=homoserine O-acetyltransferase MetX;protein_id=WP_037575305.1;transl_table=11
NZ_JAVRJR010000004.1	cmsearch	riboswitch	38332	38433	.	-	.	ID=id-NZ_JAVRJR010000004.1:38332..38433;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000004.1	RefSeq	gene	38490	38816	.	-	.	ID=gene-RM588_RS07475;Name=RM588_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07475;old_locus_tag=RM588_07470
NZ_JAVRJR010000004.1	Protein Homology	CDS	38490	38816	.	-	0	ID=cds-WP_037575307.1;Parent=gene-RM588_RS07475;Dbxref=GenBank:WP_037575307.1;Name=WP_037575307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723684.1;locus_tag=RM588_RS07475;product=branched-chain amino acid transport AzlD family protein;protein_id=WP_037575307.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	38813	39505	.	-	.	ID=gene-RM588_RS07480;Name=RM588_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07480;old_locus_tag=RM588_07475
NZ_JAVRJR010000004.1	Protein Homology	CDS	38813	39505	.	-	0	ID=cds-WP_037575308.1;Parent=gene-RM588_RS07480;Dbxref=GenBank:WP_037575308.1;Name=WP_037575308.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499825.1;locus_tag=RM588_RS07480;product=AzlC family ABC transporter permease;protein_id=WP_037575308.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	39778	41058	.	-	.	ID=gene-RM588_RS07485;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=RM588_RS07485;old_locus_tag=RM588_07480
NZ_JAVRJR010000004.1	Protein Homology	CDS	39778	41058	.	-	0	ID=cds-WP_037575310.1;Parent=gene-RM588_RS07485;Dbxref=GenBank:WP_037575310.1;Name=WP_037575310.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166058.1;locus_tag=RM588_RS07485;product=serine--tRNA ligase;protein_id=WP_037575310.1;transl_table=11
NZ_JAVRJR010000004.1	cmsearch	binding_site	41114	41298	.	-	.	ID=id-NZ_JAVRJR010000004.1:41114..41298;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000004.1	RefSeq	gene	41364	42866	.	-	.	ID=gene-RM588_RS07490;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=RM588_RS07490;old_locus_tag=RM588_07485
NZ_JAVRJR010000004.1	Protein Homology	CDS	41364	42866	.	-	0	ID=cds-WP_037575311.1;Parent=gene-RM588_RS07490;Dbxref=GenBank:WP_037575311.1;Name=WP_037575311.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454363.1;locus_tag=RM588_RS07490;product=histidine ammonia-lyase;protein_id=WP_037575311.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	43142	43954	.	+	.	ID=gene-RM588_RS07495;Name=RM588_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07495;old_locus_tag=RM588_07490
NZ_JAVRJR010000004.1	Protein Homology	CDS	43142	43954	.	+	0	ID=cds-WP_103159125.1;Parent=gene-RM588_RS07495;Dbxref=GenBank:WP_103159125.1;Name=WP_103159125.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510617.1;locus_tag=RM588_RS07495;product=NAD(P)H-hydrate dehydratase;protein_id=WP_103159125.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	44006	46660	.	-	.	ID=gene-RM588_RS07500;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=RM588_RS07500;old_locus_tag=RM588_07495
NZ_JAVRJR010000004.1	Protein Homology	CDS	44006	46660	.	-	0	ID=cds-WP_103159126.1;Parent=gene-RM588_RS07500;Dbxref=GenBank:WP_103159126.1;Name=WP_103159126.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498614.1;locus_tag=RM588_RS07500;product=DNA gyrase subunit A;protein_id=WP_103159126.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	46693	48624	.	-	.	ID=gene-RM588_RS07505;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=RM588_RS07505;old_locus_tag=RM588_07500
NZ_JAVRJR010000004.1	Protein Homology	CDS	46693	48624	.	-	0	ID=cds-WP_371874982.1;Parent=gene-RM588_RS07505;Dbxref=GenBank:WP_371874982.1;Name=WP_371874982.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126138.1;locus_tag=RM588_RS07505;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_371874982.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	48637	49752	.	-	.	ID=gene-RM588_RS07510;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=RM588_RS07510;old_locus_tag=RM588_07505
NZ_JAVRJR010000004.1	Protein Homology	CDS	48637	49752	.	-	0	ID=cds-WP_311548127.1;Parent=gene-RM588_RS07510;Dbxref=GenBank:WP_311548127.1;Name=WP_311548127.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=RM588_RS07510;product=DNA replication/repair protein RecF;protein_id=WP_311548127.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	49749	49970	.	-	.	ID=gene-RM588_RS07515;Name=RM588_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07515;old_locus_tag=RM588_07510
NZ_JAVRJR010000004.1	Protein Homology	CDS	49749	49970	.	-	0	ID=cds-WP_037565318.1;Parent=gene-RM588_RS07515;Dbxref=GenBank:WP_037565318.1;Name=WP_037565318.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612664.1;locus_tag=RM588_RS07515;product=RNA-binding S4 domain-containing protein;protein_id=WP_037565318.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	50115	50813	.	-	.	ID=gene-RM588_RS07520;Name=RM588_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07520;old_locus_tag=RM588_07515
NZ_JAVRJR010000004.1	Protein Homology	CDS	50115	50813	.	-	0	ID=cds-WP_051604977.1;Parent=gene-RM588_RS07520;Dbxref=GenBank:WP_051604977.1;Name=WP_051604977.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: protein motif:HMM:NF024853.7;locus_tag=RM588_RS07520;product=DsbA family protein;protein_id=WP_051604977.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	50950	52083	.	-	.	ID=gene-RM588_RS07525;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=RM588_RS07525;old_locus_tag=RM588_07520
NZ_JAVRJR010000004.1	Protein Homology	CDS	50950	52083	.	-	0	ID=cds-WP_311548128.1;Parent=gene-RM588_RS07525;Dbxref=GenBank:WP_311548128.1;Name=WP_311548128.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=RM588_RS07525;product=DNA polymerase III subunit beta;protein_id=WP_311548128.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	52265	53605	.	-	.	ID=gene-RM588_RS07530;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=RM588_RS07530;old_locus_tag=RM588_07525
NZ_JAVRJR010000004.1	Protein Homology	CDS	52265	53605	.	-	0	ID=cds-WP_037575324.1;Parent=gene-RM588_RS07530;Dbxref=GenBank:WP_037575324.1;Name=WP_037575324.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466368.1;locus_tag=RM588_RS07530;product=chromosomal replication initiator protein DnaA;protein_id=WP_037575324.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	54142	54279	.	+	.	ID=gene-RM588_RS07535;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=RM588_RS07535;old_locus_tag=RM588_07530
NZ_JAVRJR010000004.1	Protein Homology	CDS	54142	54279	.	+	0	ID=cds-WP_000240855.1;Parent=gene-RM588_RS07535;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=RM588_RS07535;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	54502	54849	.	+	.	ID=gene-RM588_RS07540;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=RM588_RS07540;old_locus_tag=RM588_07535
NZ_JAVRJR010000004.1	Protein Homology	CDS	54502	54849	.	+	0	ID=cds-WP_037575327.1;Parent=gene-RM588_RS07540;Dbxref=GenBank:WP_037575327.1;Name=WP_037575327.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664032.1;locus_tag=RM588_RS07540;product=ribonuclease P protein component;protein_id=WP_037575327.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	55035	56417	.	+	.	ID=gene-RM588_RS07545;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=RM588_RS07545;old_locus_tag=RM588_07540
NZ_JAVRJR010000004.1	Protein Homology	CDS	55035	56417	.	+	0	ID=cds-WP_037575330.1;Parent=gene-RM588_RS07545;Dbxref=GenBank:WP_037575330.1;Name=WP_037575330.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723673.1;locus_tag=RM588_RS07545;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_037575330.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	56434	58308	.	+	.	ID=gene-RM588_RS07550;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=RM588_RS07550;old_locus_tag=RM588_07545
NZ_JAVRJR010000004.1	Protein Homology	CDS	56434	58308	.	+	0	ID=cds-WP_037575332.1;Parent=gene-RM588_RS07550;Dbxref=GenBank:WP_037575332.1;Name=WP_037575332.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728502.1;locus_tag=RM588_RS07550;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_037575332.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	58309	59028	.	+	.	ID=gene-RM588_RS07555;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=RM588_RS07555;old_locus_tag=RM588_07550
NZ_JAVRJR010000004.1	Protein Homology	CDS	58309	59028	.	+	0	ID=cds-WP_037575335.1;Parent=gene-RM588_RS07555;Dbxref=GenBank:WP_037575335.1;Name=WP_037575335.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425723.1;locus_tag=RM588_RS07555;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_037575335.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	59070	59930	.	+	.	ID=gene-RM588_RS07560;Name=RM588_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07560;old_locus_tag=RM588_07555
NZ_JAVRJR010000004.1	Protein Homology	CDS	59070	59930	.	+	0	ID=cds-WP_037575337.1;Parent=gene-RM588_RS07560;Dbxref=GenBank:WP_037575337.1;Name=WP_037575337.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831794.1;locus_tag=RM588_RS07560;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_037575337.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	60044	60631	.	-	.	ID=gene-RM588_RS07565;Name=mhqD;gbkey=Gene;gene=mhqD;gene_biotype=protein_coding;locus_tag=RM588_RS07565;old_locus_tag=RM588_07560
NZ_JAVRJR010000004.1	Protein Homology	CDS	60044	60631	.	-	0	ID=cds-WP_037575340.1;Parent=gene-RM588_RS07565;Dbxref=GenBank:WP_037575340.1;Name=WP_037575340.1;gbkey=CDS;gene=mhqD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614947.1;locus_tag=RM588_RS07565;product=methylhydroquinone degradation carboxylesterase MhqD;protein_id=WP_037575340.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	60648	61265	.	-	.	ID=gene-RM588_RS07570;Name=RM588_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07570;old_locus_tag=RM588_07565
NZ_JAVRJR010000004.1	Protein Homology	CDS	60648	61265	.	-	0	ID=cds-WP_037575343.1;Parent=gene-RM588_RS07570;Dbxref=GenBank:WP_037575343.1;Name=WP_037575343.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166042.1;locus_tag=RM588_RS07570;product=flavin reductase family protein;protein_id=WP_037575343.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	61285	62244	.	-	.	ID=gene-RM588_RS07575;Name=mhqE;gbkey=Gene;gene=mhqE;gene_biotype=protein_coding;locus_tag=RM588_RS07575;old_locus_tag=RM588_07570
NZ_JAVRJR010000004.1	Protein Homology	CDS	61285	62244	.	-	0	ID=cds-WP_037575346.1;Parent=gene-RM588_RS07575;Dbxref=GenBank:WP_037575346.1;Name=WP_037575346.1;gbkey=CDS;gene=mhqE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425714.1;locus_tag=RM588_RS07575;product=ring-cleaving dioxygenase MhqE;protein_id=WP_037575346.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	62322	62750	.	-	.	ID=gene-RM588_RS07580;Name=RM588_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07580;old_locus_tag=RM588_07575
NZ_JAVRJR010000004.1	Protein Homology	CDS	62322	62750	.	-	0	ID=cds-WP_037575350.1;Parent=gene-RM588_RS07580;Dbxref=GenBank:WP_037575350.1;Name=WP_037575350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478630.1;locus_tag=RM588_RS07580;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575350.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	63021	64034	.	+	.	ID=gene-RM588_RS07585;Name=RM588_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07585;old_locus_tag=RM588_07580
NZ_JAVRJR010000004.1	Protein Homology	CDS	63021	64034	.	+	0	ID=cds-WP_105965576.1;Parent=gene-RM588_RS07585;Dbxref=GenBank:WP_105965576.1;Name=WP_105965576.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461555.1;locus_tag=RM588_RS07585;product=M23 family metallopeptidase;protein_id=WP_105965576.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	64078	64611	.	-	.	ID=gene-RM588_RS07590;Name=RM588_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07590;old_locus_tag=RM588_07585
NZ_JAVRJR010000004.1	Protein Homology	CDS	64078	64611	.	-	0	ID=cds-WP_103159132.1;Parent=gene-RM588_RS07590;Dbxref=GenBank:WP_103159132.1;Name=WP_103159132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425888.1;locus_tag=RM588_RS07590;product=DoxX family membrane protein;protein_id=WP_103159132.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	64850	65128	.	+	.	ID=gene-RM588_RS07595;Name=RM588_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07595;old_locus_tag=RM588_07590
NZ_JAVRJR010000004.1	Protein Homology	CDS	64850	65128	.	+	0	ID=cds-WP_103158628.1;Parent=gene-RM588_RS07595;Dbxref=GenBank:WP_103158628.1;Name=WP_103158628.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425884.1;locus_tag=RM588_RS07595;product=GNAT family N-acetyltransferase;protein_id=WP_103158628.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	65152	66360	.	+	.	ID=gene-RM588_RS07600;Name=RM588_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07600;old_locus_tag=RM588_07595
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	65152	66360	.	+	0	ID=cds-WP_105963074.1;Parent=gene-RM588_RS07600;Dbxref=GenBank:WP_105963074.1;Name=WP_105963074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07600;product=hypothetical protein;protein_id=WP_105963074.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	66672	67586	.	-	.	ID=gene-RM588_RS07605;Name=RM588_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07605;old_locus_tag=RM588_07600
NZ_JAVRJR010000004.1	Protein Homology	CDS	66672	67586	.	-	0	ID=cds-WP_105963075.1;Parent=gene-RM588_RS07605;Dbxref=GenBank:WP_105963075.1;Name=WP_105963075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220252.1;locus_tag=RM588_RS07605;product=DUF5996 family protein;protein_id=WP_105963075.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	67724	68239	.	-	.	ID=gene-RM588_RS07610;Name=RM588_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07610;old_locus_tag=RM588_07605
NZ_JAVRJR010000004.1	Protein Homology	CDS	67724	68239	.	-	0	ID=cds-WP_037575365.1;Parent=gene-RM588_RS07610;Dbxref=GenBank:WP_037575365.1;Name=WP_037575365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479056.1;locus_tag=RM588_RS07610;product=YceI family protein;protein_id=WP_037575365.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	68616	70076	.	+	.	ID=gene-RM588_RS07615;Name=RM588_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07615;old_locus_tag=RM588_07610
NZ_JAVRJR010000004.1	Protein Homology	CDS	68616	70076	.	+	0	ID=cds-WP_105967341.1;Parent=gene-RM588_RS07615;Dbxref=GenBank:WP_105967341.1;Name=WP_105967341.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999193.1;locus_tag=RM588_RS07615;product=carbon starvation CstA family protein;protein_id=WP_105967341.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	70257	70709	.	+	.	ID=gene-RM588_RS07620;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=RM588_RS07620;old_locus_tag=RM588_07615
NZ_JAVRJR010000004.1	Protein Homology	CDS	70257	70709	.	+	0	ID=cds-WP_037575371.1;Parent=gene-RM588_RS07620;Dbxref=GenBank:WP_037575371.1;Name=WP_037575371.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=RM588_RS07620;product=urease accessory protein UreE;protein_id=WP_037575371.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	70702	71391	.	+	.	ID=gene-RM588_RS07625;Name=RM588_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07625;old_locus_tag=RM588_07620
NZ_JAVRJR010000004.1	Protein Homology	CDS	70702	71391	.	+	0	ID=cds-WP_037575373.1;Parent=gene-RM588_RS07625;Dbxref=GenBank:WP_037575373.1;Name=WP_037575373.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220251.1;locus_tag=RM588_RS07625;product=urease accessory protein UreF;protein_id=WP_037575373.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	71403	72014	.	+	.	ID=gene-RM588_RS07630;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=RM588_RS07630;old_locus_tag=RM588_07625
NZ_JAVRJR010000004.1	Protein Homology	CDS	71403	72014	.	+	0	ID=cds-WP_037575375.1;Parent=gene-RM588_RS07630;Dbxref=GenBank:WP_037575375.1;Name=WP_037575375.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166031.1;locus_tag=RM588_RS07630;product=urease accessory protein UreG;protein_id=WP_037575375.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	72016	72849	.	+	.	ID=gene-RM588_RS07635;Name=RM588_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07635;old_locus_tag=RM588_07630
NZ_JAVRJR010000004.1	Protein Homology	CDS	72016	72849	.	+	0	ID=cds-WP_103158633.1;Parent=gene-RM588_RS07635;Dbxref=GenBank:WP_103158633.1;Name=WP_103158633.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728509.1;locus_tag=RM588_RS07635;product=urease accessory protein UreD;protein_id=WP_103158633.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	72950	73567	.	-	.	ID=gene-RM588_RS07640;Name=RM588_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07640;old_locus_tag=RM588_07635
NZ_JAVRJR010000004.1	Protein Homology	CDS	72950	73567	.	-	0	ID=cds-WP_311548129.1;Parent=gene-RM588_RS07640;Dbxref=GenBank:WP_311548129.1;Name=WP_311548129.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615895.1;locus_tag=RM588_RS07640;product=LysE/ArgO family amino acid transporter;protein_id=WP_311548129.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	73612	73845	.	-	.	ID=gene-RM588_RS07645;Name=RM588_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07645;old_locus_tag=RM588_07640
NZ_JAVRJR010000004.1	Protein Homology	CDS	73612	73845	.	-	0	ID=cds-WP_105963081.1;Parent=gene-RM588_RS07645;Dbxref=GenBank:WP_105963081.1;Name=WP_105963081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010530582.1;locus_tag=RM588_RS07645;product=DUF3923 family protein;protein_id=WP_105963081.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	73976	76240	.	-	.	ID=gene-RM588_RS07650;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=RM588_RS07650;old_locus_tag=RM588_07645
NZ_JAVRJR010000004.1	Protein Homology	CDS	73976	76240	.	-	0	ID=cds-WP_311548135.1;Parent=gene-RM588_RS07650;Dbxref=GenBank:WP_311548135.1;Name=WP_311548135.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445124.1;locus_tag=RM588_RS07650;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_311548135.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	76234	78075	.	-	.	ID=gene-RM588_RS07655;Name=RM588_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07655;old_locus_tag=RM588_07650
NZ_JAVRJR010000004.1	Protein Homology	CDS	76234	78075	.	-	0	ID=cds-WP_105967339.1;Parent=gene-RM588_RS07655;Dbxref=GenBank:WP_105967339.1;Name=WP_105967339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831351.1;locus_tag=RM588_RS07655;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_105967339.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	78029	79204	.	-	.	ID=gene-RM588_RS07660;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=RM588_RS07660;old_locus_tag=RM588_07655
NZ_JAVRJR010000004.1	Protein Homology	CDS	78029	79204	.	-	0	ID=cds-WP_105967338.1;Parent=gene-RM588_RS07660;Dbxref=GenBank:WP_105967338.1;Name=WP_105967338.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425702.1;locus_tag=RM588_RS07660;product=cystathionine beta-lyase MetC;protein_id=WP_105967338.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	79201	80304	.	-	.	ID=gene-RM588_RS07665;Name=RM588_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07665;old_locus_tag=RM588_07660
NZ_JAVRJR010000004.1	Protein Homology	CDS	79201	80304	.	-	0	ID=cds-WP_105967337.1;Parent=gene-RM588_RS07665;Dbxref=GenBank:WP_105967337.1;Name=WP_105967337.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723610.1;locus_tag=RM588_RS07665;product=PLP-dependent transferase;protein_id=WP_105967337.1;transl_table=11
NZ_JAVRJR010000004.1	cmsearch	binding_site	80419	80716	.	-	.	ID=id-NZ_JAVRJR010000004.1:80419..80716;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00230,COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJR010000004.1	RefSeq	gene	80903	81727	.	+	.	ID=gene-RM588_RS07670;Name=RM588_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07670;old_locus_tag=RM588_07665
NZ_JAVRJR010000004.1	Protein Homology	CDS	80903	81727	.	+	0	ID=cds-WP_311548130.1;Parent=gene-RM588_RS07670;Dbxref=GenBank:WP_311548130.1;Name=WP_311548130.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480309.1;locus_tag=RM588_RS07670;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_311548130.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	81766	82656	.	+	.	ID=gene-RM588_RS07675;Name=RM588_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07675;old_locus_tag=RM588_07670
NZ_JAVRJR010000004.1	Protein Homology	CDS	81766	82656	.	+	0	ID=cds-WP_107358759.1;Parent=gene-RM588_RS07675;Dbxref=GenBank:WP_107358759.1;Name=WP_107358759.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479237.1;locus_tag=RM588_RS07675;product=mechanosensitive ion channel family protein;protein_id=WP_107358759.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	82692	82898	.	+	.	ID=gene-RM588_RS07680;Name=RM588_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07680;old_locus_tag=RM588_07675
NZ_JAVRJR010000004.1	Protein Homology	CDS	82692	82898	.	+	0	ID=cds-WP_037575399.1;Parent=gene-RM588_RS07680;Dbxref=GenBank:WP_037575399.1;Name=WP_037575399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383300.1;locus_tag=RM588_RS07680;product=DUF951 domain-containing protein;protein_id=WP_037575399.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	82905	84002	.	+	.	ID=gene-RM588_RS07685;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=RM588_RS07685;old_locus_tag=RM588_07680
NZ_JAVRJR010000004.1	Protein Homology	CDS	82905	84002	.	+	0	ID=cds-WP_037575402.1;Parent=gene-RM588_RS07685;Dbxref=GenBank:WP_037575402.1;Name=WP_037575402.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=RM588_RS07685;product=redox-regulated ATPase YchF;protein_id=WP_037575402.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	84209	84844	.	-	.	ID=gene-RM588_RS07690;Name=RM588_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07690;old_locus_tag=RM588_07685
NZ_JAVRJR010000004.1	Protein Homology	CDS	84209	84844	.	-	0	ID=cds-WP_311539344.1;Parent=gene-RM588_RS07690;Dbxref=GenBank:WP_311539344.1;Name=WP_311539344.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019244338.1;locus_tag=RM588_RS07690;product=NAD(P)-dependent oxidoreductase;protein_id=WP_311539344.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	85157	85453	.	+	.	ID=gene-RM588_RS07695;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=RM588_RS07695;old_locus_tag=RM588_07690
NZ_JAVRJR010000004.1	Protein Homology	CDS	85157	85453	.	+	0	ID=cds-WP_037565086.1;Parent=gene-RM588_RS07695;Dbxref=GenBank:WP_037565086.1;Name=WP_037565086.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=RM588_RS07695;product=30S ribosomal protein S6;protein_id=WP_037565086.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	85477	85980	.	+	.	ID=gene-RM588_RS07700;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM588_RS07700;old_locus_tag=RM588_07695
NZ_JAVRJR010000004.1	Protein Homology	CDS	85477	85980	.	+	0	ID=cds-WP_037575408.1;Parent=gene-RM588_RS07700;Dbxref=GenBank:WP_037575408.1;Name=WP_037575408.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=RM588_RS07700;product=single-stranded DNA-binding protein;protein_id=WP_037575408.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	86023	86265	.	+	.	ID=gene-RM588_RS07705;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=RM588_RS07705;old_locus_tag=RM588_07700
NZ_JAVRJR010000004.1	Protein Homology	CDS	86023	86265	.	+	0	ID=cds-WP_037565082.1;Parent=gene-RM588_RS07705;Dbxref=GenBank:WP_037565082.1;Name=WP_037565082.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614919.1;locus_tag=RM588_RS07705;product=30S ribosomal protein S18;protein_id=WP_037565082.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	86606	87088	.	+	.	ID=gene-RM588_RS07710;Name=RM588_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07710;old_locus_tag=RM588_07705
NZ_JAVRJR010000004.1	Protein Homology	CDS	86606	87088	.	+	0	ID=cds-WP_311539343.1;Parent=gene-RM588_RS07710;Dbxref=GenBank:WP_311539343.1;Name=WP_311539343.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM588_RS07710;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311539343.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	87179	87559	.	-	.	ID=gene-RM588_RS07715;Name=RM588_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07715;old_locus_tag=RM588_07710
NZ_JAVRJR010000004.1	Protein Homology	CDS	87179	87559	.	-	0	ID=cds-WP_037575414.1;Parent=gene-RM588_RS07715;Dbxref=GenBank:WP_037575414.1;Name=WP_037575414.1;Ontology_term=GO:0006826,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614913.1;locus_tag=RM588_RS07715;product=iron chaperone;protein_id=WP_037575414.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	87721	88023	.	+	.	ID=gene-RM588_RS07720;Name=RM588_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07720;old_locus_tag=RM588_07715
NZ_JAVRJR010000004.1	Protein Homology	CDS	87721	88023	.	+	0	ID=cds-WP_037575417.1;Parent=gene-RM588_RS07720;Dbxref=GenBank:WP_037575417.1;Name=WP_037575417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506400.1;locus_tag=RM588_RS07720;product=PadR family transcriptional regulator;protein_id=WP_037575417.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	88034	89191	.	+	.	ID=gene-RM588_RS07725;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=RM588_RS07725;old_locus_tag=RM588_07720
NZ_JAVRJR010000004.1	Protein Homology	CDS	88034	89191	.	+	0	ID=cds-WP_105963090.1;Parent=gene-RM588_RS07725;Dbxref=GenBank:WP_105963090.1;Name=WP_105963090.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383282.1;locus_tag=RM588_RS07725;product=chromate efflux transporter;protein_id=WP_105963090.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	89311	90531	.	+	.	ID=gene-RM588_RS07730;Name=RM588_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07730;old_locus_tag=RM588_07725
NZ_JAVRJR010000004.1	Protein Homology	CDS	89311	90531	.	+	0	ID=cds-WP_051604979.1;Parent=gene-RM588_RS07730;Dbxref=GenBank:WP_051604979.1;Name=WP_051604979.1;Ontology_term=GO:0008152,GO:0016310,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176585.1;locus_tag=RM588_RS07730;product=glycerate kinase family protein;protein_id=WP_051604979.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	90521	91912	.	+	.	ID=gene-RM588_RS07735;Name=RM588_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07735;old_locus_tag=RM588_07730
NZ_JAVRJR010000004.1	Protein Homology	CDS	90521	91912	.	+	0	ID=cds-WP_311540670.1;Parent=gene-RM588_RS07735;Dbxref=GenBank:WP_311540670.1;Name=WP_311540670.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381576.1;locus_tag=RM588_RS07735;product=SLC13 family permease;protein_id=WP_311540670.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	91922	92599	.	+	.	ID=gene-RM588_RS07740;Name=RM588_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07740;old_locus_tag=RM588_07735
NZ_JAVRJR010000004.1	Protein Homology	CDS	91922	92599	.	+	0	ID=cds-WP_037575423.1;Parent=gene-RM588_RS07740;Dbxref=GenBank:WP_037575423.1;Name=WP_037575423.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511690.1;locus_tag=RM588_RS07740;product=response regulator transcription factor;protein_id=WP_037575423.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	92604	93974	.	+	.	ID=gene-RM588_RS07745;Name=RM588_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07745;old_locus_tag=RM588_07740
NZ_JAVRJR010000004.1	Protein Homology	CDS	92604	93974	.	+	0	ID=cds-WP_037575427.1;Parent=gene-RM588_RS07745;Dbxref=GenBank:WP_037575427.1;Name=WP_037575427.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381579.1;locus_tag=RM588_RS07745;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_037575427.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	93958	94629	.	+	.	ID=gene-RM588_RS07750;Name=RM588_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07750;old_locus_tag=RM588_07745
NZ_JAVRJR010000004.1	Protein Homology	CDS	93958	94629	.	+	0	ID=cds-WP_051604981.1;Parent=gene-RM588_RS07750;Dbxref=GenBank:WP_051604981.1;Name=WP_051604981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.7;locus_tag=RM588_RS07750;product=PepSY domain-containing protein;protein_id=WP_051604981.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	94790	95782	.	+	.	ID=gene-RM588_RS07755;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=RM588_RS07755;old_locus_tag=RM588_07750
NZ_JAVRJR010000004.1	Protein Homology	CDS	94790	95782	.	+	0	ID=cds-WP_037575430.1;Parent=gene-RM588_RS07755;Dbxref=GenBank:WP_037575430.1;Name=WP_037575430.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614912.1;locus_tag=RM588_RS07755;product=biotin synthase BioB;protein_id=WP_037575430.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	95943	96893	.	+	.	ID=gene-RM588_RS07760;Name=RM588_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07760;old_locus_tag=RM588_07755
NZ_JAVRJR010000004.1	Protein Homology	CDS	95943	96893	.	+	0	ID=cds-WP_037575432.1;Parent=gene-RM588_RS07760;Dbxref=GenBank:WP_037575432.1;Name=WP_037575432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169187.1;locus_tag=RM588_RS07760;product=DUF1002 domain-containing protein;protein_id=WP_037575432.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	96953	97426	.	-	.	ID=gene-RM588_RS07765;Name=RM588_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07765;old_locus_tag=RM588_07760
NZ_JAVRJR010000004.1	Protein Homology	CDS	96953	97426	.	-	0	ID=cds-WP_037575435.1;Parent=gene-RM588_RS07765;Dbxref=GenBank:WP_037575435.1;Name=WP_037575435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723560.1;locus_tag=RM588_RS07765;product=hypothetical protein;protein_id=WP_037575435.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	97658	99181	.	-	.	ID=gene-RM588_RS07770;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=RM588_RS07770;old_locus_tag=RM588_07765
NZ_JAVRJR010000004.1	Protein Homology	CDS	97658	99181	.	-	0	ID=cds-WP_165806054.1;Parent=gene-RM588_RS07770;Dbxref=GenBank:WP_165806054.1;Name=WP_165806054.1;Ontology_term=GO:0000302,GO:0050660,GO:0051287,GO:0102039;gbkey=CDS;gene=ahpF;go_function=flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA,NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930502.1;locus_tag=RM588_RS07770;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_165806054.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	99428	99997	.	-	.	ID=gene-RM588_RS07775;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=RM588_RS07775;old_locus_tag=RM588_07770
NZ_JAVRJR010000004.1	Protein Homology	CDS	99428	99997	.	-	0	ID=cds-WP_037575442.1;Parent=gene-RM588_RS07775;Dbxref=GenBank:WP_037575442.1;Name=WP_037575442.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=RM588_RS07775;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_037575442.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	100369	101145	.	-	.	ID=gene-RM588_RS07780;Name=RM588_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07780;old_locus_tag=RM588_07775
NZ_JAVRJR010000004.1	Protein Homology	CDS	100369	101145	.	-	0	ID=cds-WP_037575444.1;Parent=gene-RM588_RS07780;Dbxref=GenBank:WP_037575444.1;Name=WP_037575444.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472380.1;locus_tag=RM588_RS07780;product=2-keto-4-pentenoate hydratase;protein_id=WP_037575444.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	101289	102044	.	+	.	ID=gene-RM588_RS07785;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=RM588_RS07785;old_locus_tag=RM588_07780
NZ_JAVRJR010000004.1	Protein Homology	CDS	101289	102044	.	+	0	ID=cds-WP_037575446.1;Parent=gene-RM588_RS07785;Dbxref=GenBank:WP_037575446.1;Name=WP_037575446.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303929.1;locus_tag=RM588_RS07785;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_037575446.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	102167	103558	.	-	.	ID=gene-RM588_RS07790;Name=RM588_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07790;old_locus_tag=RM588_07785
NZ_JAVRJR010000004.1	Protein Homology	CDS	102167	103558	.	-	0	ID=cds-WP_103158651.1;Parent=gene-RM588_RS07790;Dbxref=GenBank:WP_103158651.1;Name=WP_103158651.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728531.1;locus_tag=RM588_RS07790;product=L-cystine transporter;protein_id=WP_103158651.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	103576	104742	.	-	.	ID=gene-RM588_RS07795;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=RM588_RS07795;old_locus_tag=RM588_07790
NZ_JAVRJR010000004.1	Protein Homology	CDS	103576	104742	.	-	0	ID=cds-WP_311540671.1;Parent=gene-RM588_RS07795;Dbxref=GenBank:WP_311540671.1;Name=WP_311540671.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169179.1;locus_tag=RM588_RS07795;product=glycine oxidase ThiO;protein_id=WP_311540671.1;transl_table=11
NZ_JAVRJR010000004.1	cmsearch	riboswitch	104848	104950	.	-	.	ID=id-NZ_JAVRJR010000004.1:104848..104950;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000004.1	RefSeq	gene	104972	105574	.	-	.	ID=gene-RM588_RS07800;Name=RM588_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07800;old_locus_tag=RM588_07795
NZ_JAVRJR010000004.1	Protein Homology	CDS	104972	105574	.	-	0	ID=cds-WP_037575455.1;Parent=gene-RM588_RS07800;Dbxref=GenBank:WP_037575455.1;Name=WP_037575455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614902.1;locus_tag=RM588_RS07800;product=hypothetical protein;protein_id=WP_037575455.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	105687	106361	.	-	.	ID=gene-RM588_RS07805;Name=RM588_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07805;old_locus_tag=RM588_07800
NZ_JAVRJR010000004.1	Protein Homology	CDS	105687	106361	.	-	0	ID=cds-WP_037575458.1;Parent=gene-RM588_RS07805;Dbxref=GenBank:WP_037575458.1;Name=WP_037575458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166946.1;locus_tag=RM588_RS07805;product=hypothetical protein;protein_id=WP_037575458.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	106608	107018	.	-	.	ID=gene-RM588_RS07810;Name=RM588_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07810;old_locus_tag=RM588_07805
NZ_JAVRJR010000004.1	Protein Homology	CDS	106608	107018	.	-	0	ID=cds-WP_037575461.1;Parent=gene-RM588_RS07810;Dbxref=GenBank:WP_037575461.1;Name=WP_037575461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166945.1;locus_tag=RM588_RS07810;product=general stress protein;protein_id=WP_037575461.1;transl_table=11
NZ_JAVRJR010000004.1	cmsearch	riboswitch	107262	107364	.	+	.	ID=id-NZ_JAVRJR010000004.1:107262..107364;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00167,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000004.1	RefSeq	gene	107611	108195	.	+	.	ID=gene-RM588_RS07815;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=RM588_RS07815;old_locus_tag=RM588_07810
NZ_JAVRJR010000004.1	Protein Homology	CDS	107611	108195	.	+	0	ID=cds-WP_037575465.1;Parent=gene-RM588_RS07815;Dbxref=GenBank:WP_037575465.1;Name=WP_037575465.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480340.1;locus_tag=RM588_RS07815;product=xanthine phosphoribosyltransferase;protein_id=WP_037575465.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	108192	109460	.	+	.	ID=gene-RM588_RS07820;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=RM588_RS07820;old_locus_tag=RM588_07815
NZ_JAVRJR010000004.1	Protein Homology	CDS	108192	109460	.	+	0	ID=cds-WP_037575467.1;Parent=gene-RM588_RS07820;Dbxref=GenBank:WP_037575467.1;Name=WP_037575467.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=RM588_RS07820;product=xanthine permease PbuX;protein_id=WP_037575467.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	109496	110962	.	+	.	ID=gene-RM588_RS07825;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=RM588_RS07825;old_locus_tag=RM588_07820
NZ_JAVRJR010000004.1	Protein Homology	CDS	109496	110962	.	+	0	ID=cds-WP_037575470.1;Parent=gene-RM588_RS07825;Dbxref=GenBank:WP_037575470.1;Name=WP_037575470.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=RM588_RS07825;product=IMP dehydrogenase;protein_id=WP_037575470.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	110985	112526	.	+	.	ID=gene-RM588_RS07830;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=RM588_RS07830;old_locus_tag=RM588_07825
NZ_JAVRJR010000004.1	Protein Homology	CDS	110985	112526	.	+	0	ID=cds-WP_037575473.1;Parent=gene-RM588_RS07830;Dbxref=GenBank:WP_037575473.1;Name=WP_037575473.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=RM588_RS07830;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_037575473.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	112620	113315	.	-	.	ID=gene-RM588_RS07835;Name=RM588_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07835;old_locus_tag=RM588_07830
NZ_JAVRJR010000004.1	Protein Homology	CDS	112620	113315	.	-	0	ID=cds-WP_182470801.1;Parent=gene-RM588_RS07835;Dbxref=GenBank:WP_182470801.1;Name=WP_182470801.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416470.1;locus_tag=RM588_RS07835;product=NYN domain-containing protein;protein_id=WP_182470801.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	114003	114977	.	+	.	ID=gene-RM588_RS07840;Name=RM588_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07840;old_locus_tag=RM588_07835
NZ_JAVRJR010000004.1	Protein Homology	CDS	114003	114977	.	+	0	ID=cds-WP_105963118.1;Parent=gene-RM588_RS07840;Dbxref=GenBank:WP_105963118.1;Name=WP_105963118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656280.1;locus_tag=RM588_RS07840;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_105963118.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	115086	116048	.	+	.	ID=gene-RM588_RS07845;Name=RM588_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07845;old_locus_tag=RM588_07840
NZ_JAVRJR010000004.1	Protein Homology	CDS	115086	116048	.	+	0	ID=cds-WP_105963119.1;Parent=gene-RM588_RS07845;Dbxref=GenBank:WP_105963119.1;Name=WP_105963119.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461419.1;locus_tag=RM588_RS07845;product=carbohydrate kinase family protein;protein_id=WP_105963119.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	116077	117495	.	+	.	ID=gene-RM588_RS07850;Name=RM588_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07850;old_locus_tag=RM588_07845
NZ_JAVRJR010000004.1	Protein Homology	CDS	116077	117495	.	+	0	ID=cds-WP_105963120.1;Parent=gene-RM588_RS07850;Dbxref=GenBank:WP_105963120.1;Name=WP_105963120.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656283.1;locus_tag=RM588_RS07850;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_105963120.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	117549	117803	.	-	.	ID=gene-RM588_RS07855;Name=RM588_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07855;old_locus_tag=RM588_07850
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	117549	117803	.	-	0	ID=cds-WP_105965615.1;Parent=gene-RM588_RS07855;Dbxref=GenBank:WP_105965615.1;Name=WP_105965615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07855;product=hypothetical protein;protein_id=WP_105965615.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	117938	119281	.	+	.	ID=gene-RM588_RS07860;Name=RM588_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07860;old_locus_tag=RM588_07855
NZ_JAVRJR010000004.1	Protein Homology	CDS	117938	119281	.	+	0	ID=cds-WP_105963121.1;Parent=gene-RM588_RS07860;Dbxref=GenBank:WP_105963121.1;Name=WP_105963121.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=RM588_RS07860;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_105963121.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	119315	119746	.	+	.	ID=gene-RM588_RS07865;Name=RM588_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07865;old_locus_tag=RM588_07860
NZ_JAVRJR010000004.1	Protein Homology	CDS	119315	119746	.	+	0	ID=cds-WP_105963122.1;Parent=gene-RM588_RS07865;Dbxref=GenBank:WP_105963122.1;Name=WP_105963122.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425893.1;locus_tag=RM588_RS07865;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_105963122.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	119899	120219	.	+	.	ID=gene-RM588_RS07870;Name=RM588_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07870;old_locus_tag=RM588_07865
NZ_JAVRJR010000004.1	Protein Homology	CDS	119899	120219	.	+	0	ID=cds-WP_037575490.1;Parent=gene-RM588_RS07870;Dbxref=GenBank:WP_037575490.1;Name=WP_037575490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498730.1;locus_tag=RM588_RS07870;product=antibiotic biosynthesis monooxygenase;protein_id=WP_037575490.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	120521	121318	.	+	.	ID=gene-RM588_RS07875;Name=RM588_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07875;old_locus_tag=RM588_07870
NZ_JAVRJR010000004.1	Protein Homology	CDS	120521	121318	.	+	0	ID=cds-WP_105963123.1;Parent=gene-RM588_RS07875;Dbxref=GenBank:WP_105963123.1;Name=WP_105963123.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.7;locus_tag=RM588_RS07875;product=trypsin-like serine peptidase;protein_id=WP_105963123.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	121875	123506	.	+	.	ID=gene-RM588_RS07880;Name=RM588_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07880;old_locus_tag=RM588_07875
NZ_JAVRJR010000004.1	Protein Homology	CDS	121875	123506	.	+	0	ID=cds-WP_105963124.1;Parent=gene-RM588_RS07880;Dbxref=GenBank:WP_105963124.1;Name=WP_105963124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020344.7;locus_tag=RM588_RS07880;product=coagulase domain-containing protein;protein_id=WP_105963124.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	123550	124092	.	-	.	ID=gene-RM588_RS07885;Name=RM588_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07885;old_locus_tag=RM588_07880
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	123550	124092	.	-	0	ID=cds-WP_133170499.1;Parent=gene-RM588_RS07885;Dbxref=GenBank:WP_133170499.1;Name=WP_133170499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07885;product=hypothetical protein;protein_id=WP_133170499.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	124268	124951	.	+	.	ID=gene-RM588_RS07890;Name=RM588_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07890;old_locus_tag=RM588_07885
NZ_JAVRJR010000004.1	Protein Homology	CDS	124268	124951	.	+	0	ID=cds-WP_037575495.1;Parent=gene-RM588_RS07890;Dbxref=GenBank:WP_037575495.1;Name=WP_037575495.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190073.1;locus_tag=RM588_RS07890;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_037575495.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	124994	125551	.	-	.	ID=gene-RM588_RS07895;Name=RM588_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07895;old_locus_tag=RM588_07890
NZ_JAVRJR010000004.1	Protein Homology	CDS	124994	125551	.	-	0	ID=cds-WP_037575497.1;Parent=gene-RM588_RS07895;Dbxref=GenBank:WP_037575497.1;Name=WP_037575497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219731.1;locus_tag=RM588_RS07895;product=hypothetical protein;protein_id=WP_037575497.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	125803	126612	.	+	.	ID=gene-RM588_RS07900;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=RM588_RS07900;old_locus_tag=RM588_07895
NZ_JAVRJR010000004.1	Protein Homology	CDS	125803	126612	.	+	0	ID=cds-WP_105965616.1;Parent=gene-RM588_RS07900;Dbxref=GenBank:WP_105965616.1;Name=WP_105965616.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166931.1;locus_tag=RM588_RS07900;product=histidine racemase CntK;protein_id=WP_105965616.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	126622	127449	.	+	.	ID=gene-RM588_RS07905;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=RM588_RS07905;old_locus_tag=RM588_07900
NZ_JAVRJR010000004.1	Protein Homology	CDS	126622	127449	.	+	0	ID=cds-WP_311541398.1;Parent=gene-RM588_RS07905;Dbxref=GenBank:WP_311541398.1;Name=WP_311541398.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444886.1;locus_tag=RM588_RS07905;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_311541398.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	127446	128738	.	+	.	ID=gene-RM588_RS07910;Name=RM588_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07910;old_locus_tag=RM588_07905
NZ_JAVRJR010000004.1	Protein Homology	CDS	127446	128738	.	+	0	ID=cds-WP_105967326.1;Parent=gene-RM588_RS07910;Dbxref=GenBank:WP_105967326.1;Name=WP_105967326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425639.1;locus_tag=RM588_RS07910;product=opine metallophore biosynthesis dehydrogenase;protein_id=WP_105967326.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	128768	130366	.	+	.	ID=gene-RM588_RS07915;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=RM588_RS07915;old_locus_tag=RM588_07910
NZ_JAVRJR010000004.1	Protein Homology	CDS	128768	130366	.	+	0	ID=cds-WP_103158720.1;Parent=gene-RM588_RS07915;Dbxref=GenBank:WP_103158720.1;Name=WP_103158720.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229067.1;locus_tag=RM588_RS07915;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein;protein_id=WP_103158720.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	130379	131311	.	+	.	ID=gene-RM588_RS07920;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=RM588_RS07920;old_locus_tag=RM588_07915
NZ_JAVRJR010000004.1	Protein Homology	CDS	130379	131311	.	+	0	ID=cds-WP_037575506.1;Parent=gene-RM588_RS07920;Dbxref=GenBank:WP_037575506.1;Name=WP_037575506.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425637.1;locus_tag=RM588_RS07920;product=nickel/cobalt ABC transporter permease;protein_id=WP_037575506.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	131312	132178	.	+	.	ID=gene-RM588_RS07925;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=RM588_RS07925;old_locus_tag=RM588_07920
NZ_JAVRJR010000004.1	Protein Homology	CDS	131312	132178	.	+	0	ID=cds-WP_105967325.1;Parent=gene-RM588_RS07925;Dbxref=GenBank:WP_105967325.1;Name=WP_105967325.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444882.1;locus_tag=RM588_RS07925;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_105967325.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	132175	132993	.	+	.	ID=gene-RM588_RS07930;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=RM588_RS07930;old_locus_tag=RM588_07925
NZ_JAVRJR010000004.1	Protein Homology	CDS	132175	132993	.	+	0	ID=cds-WP_119505308.1;Parent=gene-RM588_RS07930;Dbxref=GenBank:WP_119505308.1;Name=WP_119505308.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168634.1;locus_tag=RM588_RS07930;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_119505308.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	132987	133724	.	+	.	ID=gene-RM588_RS07935;Name=RM588_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07935;old_locus_tag=RM588_07930
NZ_JAVRJR010000004.1	Protein Homology	CDS	132987	133724	.	+	0	ID=cds-WP_105967323.1;Parent=gene-RM588_RS07935;Dbxref=GenBank:WP_105967323.1;Name=WP_105967323.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614876.1;locus_tag=RM588_RS07935;product=ABC transporter ATP-binding protein;protein_id=WP_105967323.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	133739	134950	.	+	.	ID=gene-RM588_RS07940;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=RM588_RS07940;old_locus_tag=RM588_07935
NZ_JAVRJR010000004.1	Protein Homology	CDS	133739	134950	.	+	0	ID=cds-WP_037575515.1;Parent=gene-RM588_RS07940;Dbxref=GenBank:WP_037575515.1;Name=WP_037575515.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005827923.1;locus_tag=RM588_RS07940;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_037575515.1;transl_table=11
NZ_JAVRJR010000004.1	cmsearch	riboswitch	135636	135740	.	+	.	ID=id-NZ_JAVRJR010000004.1:135636..135740;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00442,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000004.1	RefSeq	gene	135790	136110	.	+	.	ID=gene-RM588_RS07945;Name=RM588_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07945;old_locus_tag=RM588_07940
NZ_JAVRJR010000004.1	Protein Homology	CDS	135790	136110	.	+	0	ID=cds-WP_037575517.1;Parent=gene-RM588_RS07945;Dbxref=GenBank:WP_037575517.1;Name=WP_037575517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006903.1;locus_tag=RM588_RS07945;product=DMT family transporter;protein_id=WP_037575517.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	136111	136425	.	+	.	ID=gene-RM588_RS07950;Name=RM588_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07950;old_locus_tag=RM588_07945
NZ_JAVRJR010000004.1	Protein Homology	CDS	136111	136425	.	+	0	ID=cds-WP_037575519.1;Parent=gene-RM588_RS07950;Dbxref=GenBank:WP_037575519.1;Name=WP_037575519.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912747.1;locus_tag=RM588_RS07950;product=DMT family transporter;protein_id=WP_037575519.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	136453	136641	.	+	.	ID=gene-RM588_RS07955;Name=RM588_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07955;old_locus_tag=RM588_07950
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	136453	136641	.	+	0	ID=cds-WP_037575523.1;Parent=gene-RM588_RS07955;Dbxref=GenBank:WP_037575523.1;Name=WP_037575523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS07955;product=hypothetical protein;protein_id=WP_037575523.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	136719	137270	.	+	.	ID=gene-RM588_RS07960;Name=RM588_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07960;old_locus_tag=RM588_07955
NZ_JAVRJR010000004.1	Protein Homology	CDS	136719	137270	.	+	0	ID=cds-WP_037575601.1;Parent=gene-RM588_RS07960;Dbxref=GenBank:WP_037575601.1;Name=WP_037575601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723305.1;locus_tag=RM588_RS07960;product=hypothetical protein;protein_id=WP_037575601.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	137294	138166	.	-	.	ID=gene-RM588_RS07965;Name=RM588_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07965;old_locus_tag=RM588_07960
NZ_JAVRJR010000004.1	Protein Homology	CDS	137294	138166	.	-	0	ID=cds-WP_311540680.1;Parent=gene-RM588_RS07965;Dbxref=GenBank:WP_311540680.1;Name=WP_311540680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425627.1;locus_tag=RM588_RS07965;product=oxidoreductase;protein_id=WP_311540680.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	138233	139045	.	+	.	ID=gene-RM588_RS07970;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=RM588_RS07970;old_locus_tag=RM588_07965
NZ_JAVRJR010000004.1	Protein Homology	CDS	138233	139045	.	+	0	ID=cds-WP_105967322.1;Parent=gene-RM588_RS07970;Dbxref=GenBank:WP_105967322.1;Name=WP_105967322.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431941.1;locus_tag=RM588_RS07970;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_105967322.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	139038	139895	.	+	.	ID=gene-RM588_RS07975;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=RM588_RS07975;old_locus_tag=RM588_07970
NZ_JAVRJR010000004.1	Protein Homology	CDS	139038	139895	.	+	0	ID=cds-WP_103158714.1;Parent=gene-RM588_RS07975;Dbxref=GenBank:WP_103158714.1;Name=WP_103158714.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425625.1;locus_tag=RM588_RS07975;product=pantoate--beta-alanine ligase;protein_id=WP_103158714.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	139892	140275	.	+	.	ID=gene-RM588_RS07980;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=RM588_RS07980;old_locus_tag=RM588_07975
NZ_JAVRJR010000004.1	Protein Homology	CDS	139892	140275	.	+	0	ID=cds-WP_037575534.1;Parent=gene-RM588_RS07980;Dbxref=GenBank:WP_037575534.1;Name=WP_037575534.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901315.1;locus_tag=RM588_RS07980;product=aspartate 1-decarboxylase;protein_id=WP_037575534.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	140681	141019	.	+	.	ID=gene-RM588_RS11335;Name=RM588_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11335
NZ_JAVRJR010000004.1	Protein Homology	CDS	140681	141019	.	+	0	ID=cds-WP_338323073.1;Parent=gene-RM588_RS11335;Dbxref=GenBank:WP_338323073.1;Name=WP_338323073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028192.7;locus_tag=RM588_RS11335;product=DUF5079 family protein;protein_id=WP_338323073.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	141334	142185	.	-	.	ID=gene-RM588_RS07985;Name=RM588_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07985;old_locus_tag=RM588_07980
NZ_JAVRJR010000004.1	Protein Homology	CDS	141334	142185	.	-	0	ID=cds-WP_105992312.1;Parent=gene-RM588_RS07985;Dbxref=GenBank:WP_105992312.1;Name=WP_105992312.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444161.1;locus_tag=RM588_RS07985;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_105992312.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	142398	145022	.	+	.	ID=gene-RM588_RS07990;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=RM588_RS07990;old_locus_tag=RM588_07985
NZ_JAVRJR010000004.1	Protein Homology	CDS	142398	145022	.	+	0	ID=cds-WP_107370521.1;Parent=gene-RM588_RS07990;Dbxref=GenBank:WP_107370521.1;Name=WP_107370521.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425622.1;locus_tag=RM588_RS07990;product=pyruvate%2C phosphate dikinase;protein_id=WP_107370521.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	145024	145830	.	+	.	ID=gene-RM588_RS07995;Name=RM588_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS07995;old_locus_tag=RM588_07990
NZ_JAVRJR010000004.1	Protein Homology	CDS	145024	145830	.	+	0	ID=cds-WP_107370522.1;Parent=gene-RM588_RS07995;Dbxref=GenBank:WP_107370522.1;Name=WP_107370522.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728561.1;locus_tag=RM588_RS07995;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_107370522.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	146043	147371	.	+	.	ID=gene-RM588_RS08000;Name=RM588_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08000;old_locus_tag=RM588_07995
NZ_JAVRJR010000004.1	Protein Homology	CDS	146043	147371	.	+	0	ID=cds-WP_105963497.1;Parent=gene-RM588_RS08000;Dbxref=GenBank:WP_105963497.1;Name=WP_105963497.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898389.1;locus_tag=RM588_RS08000;product=sodium-dependent transporter;protein_id=WP_105963497.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	147464	148801	.	-	.	ID=gene-RM588_RS08005;Name=RM588_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08005;old_locus_tag=RM588_08000
NZ_JAVRJR010000004.1	Protein Homology	CDS	147464	148801	.	-	0	ID=cds-WP_311548132.1;Parent=gene-RM588_RS08005;Dbxref=GenBank:WP_311548132.1;Name=WP_311548132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425618.1;locus_tag=RM588_RS08005;product=carboxylesterase family protein;protein_id=WP_311548132.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	148813	149235	.	-	.	ID=gene-RM588_RS08010;Name=RM588_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08010;old_locus_tag=RM588_08005
NZ_JAVRJR010000004.1	Protein Homology	CDS	148813	149235	.	-	0	ID=cds-WP_105996848.1;Parent=gene-RM588_RS08010;Dbxref=GenBank:WP_105996848.1;Name=WP_105996848.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007203936.1;locus_tag=RM588_RS08010;product=GNAT family N-acetyltransferase;protein_id=WP_105996848.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	149389	150300	.	+	.	ID=gene-RM588_RS08015;Name=RM588_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08015;old_locus_tag=RM588_08010
NZ_JAVRJR010000004.1	Protein Homology	CDS	149389	150300	.	+	0	ID=cds-WP_311539326.1;Parent=gene-RM588_RS08015;Dbxref=GenBank:WP_311539326.1;Name=WP_311539326.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016913052.1;locus_tag=RM588_RS08015;product=PLP-dependent cysteine synthase family protein;protein_id=WP_311539326.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	150293	151432	.	+	.	ID=gene-RM588_RS08020;Name=RM588_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08020;old_locus_tag=RM588_08015
NZ_JAVRJR010000004.1	Protein Homology	CDS	150293	151432	.	+	0	ID=cds-WP_105963494.1;Parent=gene-RM588_RS08020;Dbxref=GenBank:WP_105963494.1;Name=WP_105963494.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482209.1;locus_tag=RM588_RS08020;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_105963494.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	151726	152730	.	+	.	ID=gene-RM588_RS08025;Name=RM588_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08025;old_locus_tag=RM588_08020
NZ_JAVRJR010000004.1	Protein Homology	CDS	151726	152730	.	+	0	ID=cds-WP_311539325.1;Parent=gene-RM588_RS08025;Dbxref=GenBank:WP_311539325.1;Name=WP_311539325.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170274.1;locus_tag=RM588_RS08025;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_311539325.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	152792	154039	.	-	.	ID=gene-RM588_RS08030;Name=RM588_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08030;old_locus_tag=RM588_08025
NZ_JAVRJR010000004.1	Protein Homology	CDS	152792	154039	.	-	0	ID=cds-WP_311540682.1;Parent=gene-RM588_RS08030;Dbxref=GenBank:WP_311540682.1;Name=WP_311540682.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM588_RS08030;product=YhgE/Pip domain-containing protein;protein_id=WP_311540682.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	154184	154795	.	+	.	ID=gene-RM588_RS08035;Name=RM588_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08035;old_locus_tag=RM588_08030
NZ_JAVRJR010000004.1	Protein Homology	CDS	154184	154795	.	+	0	ID=cds-WP_311540683.1;Parent=gene-RM588_RS08035;Dbxref=GenBank:WP_311540683.1;Name=WP_311540683.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425612.1;locus_tag=RM588_RS08035;product=TetR/AcrR family transcriptional regulator;protein_id=WP_311540683.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	155032	155304	.	-	.	ID=gene-RM588_RS08040;Name=RM588_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08040;old_locus_tag=RM588_08035
NZ_JAVRJR010000004.1	Protein Homology	CDS	155032	155304	.	-	0	ID=cds-WP_037575566.1;Parent=gene-RM588_RS08040;Dbxref=GenBank:WP_037575566.1;Name=WP_037575566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425611.1;locus_tag=RM588_RS08040;product=hypothetical protein;protein_id=WP_037575566.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	155530	156039	.	+	.	ID=gene-RM588_RS08045;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM588_RS08045;old_locus_tag=RM588_08040
NZ_JAVRJR010000004.1	Protein Homology	CDS	155530	156039	.	+	0	ID=cds-WP_311540389.1;Parent=gene-RM588_RS08045;Dbxref=GenBank:WP_311540389.1;Name=WP_311540389.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166374.1;locus_tag=RM588_RS08045;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_311540389.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	156104	158365	.	-	.	ID=gene-RM588_RS08050;Name=RM588_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08050;old_locus_tag=RM588_08045
NZ_JAVRJR010000004.1	Protein Homology	CDS	156104	158365	.	-	0	ID=cds-WP_311540390.1;Parent=gene-RM588_RS08050;Dbxref=GenBank:WP_311540390.1;Name=WP_311540390.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466595.1;locus_tag=RM588_RS08050;product=ATP-binding cassette domain-containing protein;protein_id=WP_311540390.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	158358	159188	.	-	.	ID=gene-RM588_RS08055;Name=RM588_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08055;old_locus_tag=RM588_08050
NZ_JAVRJR010000004.1	Protein Homology	CDS	158358	159188	.	-	0	ID=cds-WP_105965630.1;Parent=gene-RM588_RS08055;Dbxref=GenBank:WP_105965630.1;Name=WP_105965630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220087.1;locus_tag=RM588_RS08055;product=YibE/F family protein;protein_id=WP_105965630.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	159185	160297	.	-	.	ID=gene-RM588_RS08060;Name=RM588_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08060;old_locus_tag=RM588_08055
NZ_JAVRJR010000004.1	Protein Homology	CDS	159185	160297	.	-	0	ID=cds-WP_103158702.1;Parent=gene-RM588_RS08060;Dbxref=GenBank:WP_103158702.1;Name=WP_103158702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469651.1;locus_tag=RM588_RS08060;product=YibE/F family protein;protein_id=WP_103158702.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	160310	161185	.	-	.	ID=gene-RM588_RS08065;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=RM588_RS08065;old_locus_tag=RM588_08060
NZ_JAVRJR010000004.1	Protein Homology	CDS	160310	161185	.	-	0	ID=cds-WP_103158701.1;Parent=gene-RM588_RS08065;Dbxref=GenBank:WP_103158701.1;Name=WP_103158701.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614835.1;locus_tag=RM588_RS08065;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_103158701.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	161309	165814	.	+	.	ID=gene-RM588_RS08070;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=RM588_RS08070;old_locus_tag=RM588_08065
NZ_JAVRJR010000004.1	Protein Homology	CDS	161309	165814	.	+	0	ID=cds-WP_311548133.1;Parent=gene-RM588_RS08070;Dbxref=GenBank:WP_311548133.1;Name=WP_311548133.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166369.1;locus_tag=RM588_RS08070;product=glutamate synthase large subunit;protein_id=WP_311548133.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	165828	167285	.	+	.	ID=gene-RM588_RS08075;Name=RM588_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08075;old_locus_tag=RM588_08070
NZ_JAVRJR010000004.1	Protein Homology	CDS	165828	167285	.	+	0	ID=cds-WP_103158699.1;Parent=gene-RM588_RS08075;Dbxref=GenBank:WP_103158699.1;Name=WP_103158699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445259.1;locus_tag=RM588_RS08075;product=glutamate synthase subunit beta;protein_id=WP_103158699.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	167352	167444	.	+	.	ID=gene-RM588_RS08080;Name=RM588_RS08080;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS08080;old_locus_tag=RM588_08075
NZ_JAVRJR010000004.1	tRNAscan-SE	tRNA	167352	167444	.	+	.	ID=rna-RM588_RS08080;Parent=gene-RM588_RS08080;anticodon=(pos:167388..167390);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS08080;product=tRNA-Ser
NZ_JAVRJR010000004.1	tRNAscan-SE	exon	167352	167444	.	+	.	ID=exon-RM588_RS08080-1;Parent=rna-RM588_RS08080;anticodon=(pos:167388..167390);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS08080;product=tRNA-Ser
NZ_JAVRJR010000004.1	RefSeq	gene	167557	167727	.	+	.	ID=gene-RM588_RS08085;Name=RM588_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08085;old_locus_tag=RM588_08080
NZ_JAVRJR010000004.1	GeneMarkS-2+	CDS	167557	167727	.	+	0	ID=cds-WP_157946214.1;Parent=gene-RM588_RS08085;Dbxref=GenBank:WP_157946214.1;Name=WP_157946214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08085;product=hypothetical protein;protein_id=WP_157946214.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	168028	169464	.	+	.	ID=gene-RM588_RS08090;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=RM588_RS08090;old_locus_tag=RM588_08085
NZ_JAVRJR010000004.1	Protein Homology	CDS	168028	169464	.	+	0	ID=cds-WP_103158698.1;Parent=gene-RM588_RS08090;Dbxref=GenBank:WP_103158698.1;Name=WP_103158698.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279382.1;locus_tag=RM588_RS08090;product=PTS system trehalose-specific EIIBC component;protein_id=WP_103158698.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	169481	171121	.	+	.	ID=gene-RM588_RS08095;Name=RM588_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08095;old_locus_tag=RM588_08090
NZ_JAVRJR010000004.1	Protein Homology	CDS	169481	171121	.	+	0	ID=cds-WP_103158697.1;Parent=gene-RM588_RS08095;Dbxref=GenBank:WP_103158697.1;Name=WP_103158697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454507.1;locus_tag=RM588_RS08095;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_103158697.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	171137	171862	.	+	.	ID=gene-RM588_RS08100;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=RM588_RS08100;old_locus_tag=RM588_08095
NZ_JAVRJR010000004.1	Protein Homology	CDS	171137	171862	.	+	0	ID=cds-WP_103158696.1;Parent=gene-RM588_RS08100;Dbxref=GenBank:WP_103158696.1;Name=WP_103158696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303885.1;locus_tag=RM588_RS08100;product=trehalose operon repressor;protein_id=WP_103158696.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	171956	172225	.	+	.	ID=gene-RM588_RS08105;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=RM588_RS08105;old_locus_tag=RM588_08100
NZ_JAVRJR010000004.1	cmsearch	SRP_RNA	171956	172225	.	+	.	ID=rna-RM588_RS08105;Parent=gene-RM588_RS08105;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS08105;product=signal recognition particle sRNA large type
NZ_JAVRJR010000004.1	cmsearch	exon	171956	172225	.	+	.	ID=exon-RM588_RS08105-1;Parent=rna-RM588_RS08105;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01854,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM588_RS08105;product=signal recognition particle sRNA large type
NZ_JAVRJR010000004.1	RefSeq	gene	172405	172938	.	+	.	ID=gene-RM588_RS08110;Name=RM588_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08110;old_locus_tag=RM588_08105
NZ_JAVRJR010000004.1	Protein Homology	CDS	172405	172938	.	+	0	ID=cds-WP_037577441.1;Parent=gene-RM588_RS08110;Dbxref=GenBank:WP_037577441.1;Name=WP_037577441.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614829.1;locus_tag=RM588_RS08110;product=GNAT family N-acetyltransferase;protein_id=WP_037577441.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	173004	174692	.	+	.	ID=gene-RM588_RS08115;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=RM588_RS08115;old_locus_tag=RM588_08110
NZ_JAVRJR010000004.1	Protein Homology	CDS	173004	174692	.	+	0	ID=cds-WP_311541401.1;Parent=gene-RM588_RS08115;Dbxref=GenBank:WP_311541401.1;Name=WP_311541401.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166100.1;locus_tag=RM588_RS08115;product=DNA polymerase III subunit gamma/tau;protein_id=WP_311541401.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	174802	175122	.	+	.	ID=gene-RM588_RS08120;Name=RM588_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08120;old_locus_tag=RM588_08115
NZ_JAVRJR010000004.1	Protein Homology	CDS	174802	175122	.	+	0	ID=cds-WP_037564914.1;Parent=gene-RM588_RS08120;Dbxref=GenBank:WP_037564914.1;Name=WP_037564914.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383384.1;locus_tag=RM588_RS08120;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_037564914.1;transl_table=11
NZ_JAVRJR010000004.1	RefSeq	gene	175124	175720	.	+	.	ID=gene-RM588_RS08125;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=RM588_RS08125;old_locus_tag=RM588_08120
NZ_JAVRJR010000004.1	Protein Homology	CDS	175124	175720	.	+	0	ID=cds-WP_037577434.1;Parent=gene-RM588_RS08125;Dbxref=GenBank:WP_037577434.1;Name=WP_037577434.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=RM588_RS08125;product=recombination mediator RecR;protein_id=WP_037577434.1;transl_table=11
##sequence-region NZ_JAVRJR010000005.1 1 126909
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000005.1	RefSeq	region	1	126909	.	+	.	ID=NZ_JAVRJR010000005.1:1..126909;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000005.1	RefSeq	gene	1	377	.	-	.	ID=gene-RM588_RS08130;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM588_RS08130;old_locus_tag=RM588_08125;partial=true;start_range=.,1
NZ_JAVRJR010000005.1	Protein Homology	CDS	1	377	.	-	0	ID=cds-WP_311548136.1;Parent=gene-RM588_RS08130;Dbxref=GenBank:WP_311548136.1;Name=WP_311548136.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM588_RS08130;partial=true;product=deoxyribose-phosphate aldolase;protein_id=WP_311548136.1;start_range=.,1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	621	1448	.	+	.	ID=gene-RM588_RS08135;Name=RM588_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08135;old_locus_tag=RM588_08130
NZ_JAVRJR010000005.1	Protein Homology	CDS	621	1448	.	+	0	ID=cds-WP_136732106.1;Parent=gene-RM588_RS08135;Dbxref=GenBank:WP_136732106.1;Name=WP_136732106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612902.1;locus_tag=RM588_RS08135;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_136732106.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	1445	2059	.	+	.	ID=gene-RM588_RS08140;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=RM588_RS08140;old_locus_tag=RM588_08135
NZ_JAVRJR010000005.1	Protein Homology	CDS	1445	2059	.	+	0	ID=cds-WP_107372047.1;Parent=gene-RM588_RS08140;Dbxref=GenBank:WP_107372047.1;Name=WP_107372047.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729680.1;locus_tag=RM588_RS08140;product=ATP phosphoribosyltransferase;protein_id=WP_107372047.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	2049	3299	.	+	.	ID=gene-RM588_RS08145;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=RM588_RS08145;old_locus_tag=RM588_08140
NZ_JAVRJR010000005.1	Protein Homology	CDS	2049	3299	.	+	0	ID=cds-WP_105965685.1;Parent=gene-RM588_RS08145;Dbxref=GenBank:WP_105965685.1;Name=WP_105965685.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302397.1;locus_tag=RM588_RS08145;product=histidinol dehydrogenase;protein_id=WP_105965685.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	3305	4315	.	+	.	ID=gene-RM588_RS08150;Name=RM588_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08150;old_locus_tag=RM588_08145
NZ_JAVRJR010000005.1	Protein Homology	CDS	3305	4315	.	+	0	ID=cds-WP_107366621.1;Parent=gene-RM588_RS08150;Dbxref=GenBank:WP_107366621.1;Name=WP_107366621.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167084.1;locus_tag=RM588_RS08150;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_107366621.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	4299	4874	.	+	.	ID=gene-RM588_RS08155;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=RM588_RS08155;old_locus_tag=RM588_08150
NZ_JAVRJR010000005.1	Protein Homology	CDS	4299	4874	.	+	0	ID=cds-WP_136732108.1;Parent=gene-RM588_RS08155;Dbxref=GenBank:WP_136732108.1;Name=WP_136732108.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437839.1;locus_tag=RM588_RS08155;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_136732108.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	4871	5446	.	+	.	ID=gene-RM588_RS08160;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=RM588_RS08160;old_locus_tag=RM588_08155
NZ_JAVRJR010000005.1	Protein Homology	CDS	4871	5446	.	+	0	ID=cds-WP_107367387.1;Parent=gene-RM588_RS08160;Dbxref=GenBank:WP_107367387.1;Name=WP_107367387.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635614.1;locus_tag=RM588_RS08160;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_107367387.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	5439	6143	.	+	.	ID=gene-RM588_RS08165;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=RM588_RS08165;old_locus_tag=RM588_08160
NZ_JAVRJR010000005.1	Protein Homology	CDS	5439	6143	.	+	0	ID=cds-WP_037577139.1;Parent=gene-RM588_RS08165;Dbxref=GenBank:WP_037577139.1;Name=WP_037577139.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168444.1;locus_tag=RM588_RS08165;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_037577139.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	6140	6898	.	+	.	ID=gene-RM588_RS11340;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=RM588_RS11340
NZ_JAVRJR010000005.1	Protein Homology	CDS	6140	6898	.	+	0	ID=cds-WP_105963301.1;Parent=gene-RM588_RS11340;Dbxref=GenBank:WP_105963301.1;Name=WP_105963301.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592599.1;locus_tag=RM588_RS11340;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_105963301.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	6895	7524	.	+	.	ID=gene-RM588_RS11345;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=RM588_RS11345
NZ_JAVRJR010000005.1	Protein Homology	CDS	6895	7524	.	+	0	ID=cds-WP_375713818.1;Parent=gene-RM588_RS11345;Dbxref=GenBank:WP_375713818.1;Name=WP_375713818.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168442.1;locus_tag=RM588_RS11345;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_375713818.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	7638	8687	.	-	.	ID=gene-RM588_RS08175;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM588_RS08175;old_locus_tag=RM588_08170
NZ_JAVRJR010000005.1	Protein Homology	CDS	7638	8687	.	-	0	ID=cds-WP_248680342.1;Parent=gene-RM588_RS08175;Dbxref=GenBank:WP_248680342.1;Name=WP_248680342.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506553.1;locus_tag=RM588_RS08175;product=ornithine carbamoyltransferase;protein_id=WP_248680342.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	8894	9343	.	-	.	ID=gene-RM588_RS08180;Name=RM588_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08180;old_locus_tag=RM588_08175
NZ_JAVRJR010000005.1	Protein Homology	CDS	8894	9343	.	-	0	ID=cds-WP_107363994.1;Parent=gene-RM588_RS08180;Dbxref=GenBank:WP_107363994.1;Name=WP_107363994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899968.1;locus_tag=RM588_RS08180;product=DUF1801 domain-containing protein;protein_id=WP_107363994.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	9368	10015	.	-	.	ID=gene-RM588_RS08185;Name=RM588_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08185;old_locus_tag=RM588_08180
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	9368	10015	.	-	0	ID=cds-WP_136732111.1;Parent=gene-RM588_RS08185;Dbxref=GenBank:WP_136732111.1;Name=WP_136732111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08185;product=hypothetical protein;protein_id=WP_136732111.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	10346	12040	.	-	.	ID=gene-RM588_RS08190;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=RM588_RS08190;old_locus_tag=RM588_08185
NZ_JAVRJR010000005.1	Protein Homology	CDS	10346	12040	.	-	0	ID=cds-WP_311548137.1;Parent=gene-RM588_RS08190;Dbxref=GenBank:WP_311548137.1;Name=WP_311548137.1;Ontology_term=GO:0031456,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426039.1;locus_tag=RM588_RS08190;product=choline dehydrogenase;protein_id=WP_311548137.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	12062	13561	.	-	.	ID=gene-RM588_RS08195;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=RM588_RS08195;old_locus_tag=RM588_08190
NZ_JAVRJR010000005.1	Protein Homology	CDS	12062	13561	.	-	0	ID=cds-WP_103159082.1;Parent=gene-RM588_RS08195;Dbxref=GenBank:WP_103159082.1;Name=WP_103159082.1;Ontology_term=GO:0031456,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process|0031456||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471432.1;locus_tag=RM588_RS08195;product=betaine-aldehyde dehydrogenase;protein_id=WP_103159082.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	13772	14332	.	+	.	ID=gene-RM588_RS08200;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=RM588_RS08200;old_locus_tag=RM588_08195
NZ_JAVRJR010000005.1	Protein Homology	CDS	13772	14332	.	+	0	ID=cds-WP_103159083.1;Parent=gene-RM588_RS08200;Dbxref=GenBank:WP_103159083.1;Name=WP_103159083.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198602.1;locus_tag=RM588_RS08200;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_103159083.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	14557	16173	.	-	.	ID=gene-RM588_RS08205;Name=RM588_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08205;old_locus_tag=RM588_08200
NZ_JAVRJR010000005.1	Protein Homology	CDS	14557	16173	.	-	0	ID=cds-WP_037577153.1;Parent=gene-RM588_RS08205;Dbxref=GenBank:WP_037577153.1;Name=WP_037577153.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452081.1;locus_tag=RM588_RS08205;product=BCCT family transporter;protein_id=WP_037577153.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	16941	17087	.	+	.	ID=gene-RM588_RS08210;Name=RM588_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08210;old_locus_tag=RM588_08205
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	16941	17087	.	+	0	ID=cds-WP_157946134.1;Parent=gene-RM588_RS08210;Dbxref=GenBank:WP_157946134.1;Name=WP_157946134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08210;product=hypothetical protein;protein_id=WP_157946134.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	17431	17910	.	-	.	ID=gene-RM588_RS08215;Name=RM588_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08215;old_locus_tag=RM588_08210
NZ_JAVRJR010000005.1	Protein Homology	CDS	17431	17910	.	-	0	ID=cds-WP_103159598.1;Parent=gene-RM588_RS08215;Dbxref=GenBank:WP_103159598.1;Name=WP_103159598.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024917.7;locus_tag=RM588_RS08215;product=GNAT family N-acetyltransferase;protein_id=WP_103159598.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	pseudogene	18039	18726	.	-	.	ID=gene-RM588_RS08220;Name=RM588_RS08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS08220;old_locus_tag=RM588_08215;pseudo=true
NZ_JAVRJR010000005.1	Protein Homology	CDS	18039	18726	.	-	0	ID=cds-RM588_RS08220;Parent=gene-RM588_RS08220;Note=frameshifted;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436367.1;locus_tag=RM588_RS08220;product=flavin reductase family protein;pseudo=true;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	18916	21786	.	-	.	ID=gene-RM588_RS08225;Name=RM588_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08225;old_locus_tag=RM588_08220
NZ_JAVRJR010000005.1	Protein Homology	CDS	18916	21786	.	-	0	ID=cds-WP_311548138.1;Parent=gene-RM588_RS08225;Dbxref=GenBank:WP_311548138.1;Name=WP_311548138.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167071.1;locus_tag=RM588_RS08225;product=DEAD/DEAH box helicase;protein_id=WP_311548138.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	21789	22181	.	-	.	ID=gene-RM588_RS08230;Name=RM588_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08230;old_locus_tag=RM588_08225
NZ_JAVRJR010000005.1	Protein Homology	CDS	21789	22181	.	-	0	ID=cds-WP_037577110.1;Parent=gene-RM588_RS08230;Dbxref=GenBank:WP_037577110.1;Name=WP_037577110.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470196.1;locus_tag=RM588_RS08230;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_037577110.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	22319	23026	.	+	.	ID=gene-RM588_RS08235;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=RM588_RS08235;old_locus_tag=RM588_08230
NZ_JAVRJR010000005.1	Protein Homology	CDS	22319	23026	.	+	0	ID=cds-WP_311548139.1;Parent=gene-RM588_RS08235;Dbxref=GenBank:WP_311548139.1;Name=WP_311548139.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636624.1;locus_tag=RM588_RS08235;product=acetolactate decarboxylase;protein_id=WP_311548139.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	23160	24581	.	-	.	ID=gene-RM588_RS08240;Name=RM588_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08240;old_locus_tag=RM588_08235
NZ_JAVRJR010000005.1	Protein Homology	CDS	23160	24581	.	-	0	ID=cds-WP_105965679.1;Parent=gene-RM588_RS08240;Dbxref=GenBank:WP_105965679.1;Name=WP_105965679.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168428.1;locus_tag=RM588_RS08240;product=alkaline phosphatase;protein_id=WP_105965679.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	24845	26284	.	-	.	ID=gene-RM588_RS08245;Name=RM588_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08245;old_locus_tag=RM588_08240
NZ_JAVRJR010000005.1	Protein Homology	CDS	24845	26284	.	-	0	ID=cds-WP_136732114.1;Parent=gene-RM588_RS08245;Dbxref=GenBank:WP_136732114.1;Name=WP_136732114.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506893.1;locus_tag=RM588_RS08245;product=alkaline phosphatase;protein_id=WP_136732114.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	26536	27156	.	-	.	ID=gene-RM588_RS08250;Name=RM588_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08250;old_locus_tag=RM588_08245
NZ_JAVRJR010000005.1	Protein Homology	CDS	26536	27156	.	-	0	ID=cds-WP_107388099.1;Parent=gene-RM588_RS08250;Dbxref=GenBank:WP_107388099.1;Name=WP_107388099.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912288.1;locus_tag=RM588_RS08250;product=DedA family protein;protein_id=WP_107388099.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	27267	27662	.	-	.	ID=gene-RM588_RS08255;Name=RM588_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08255;old_locus_tag=RM588_08250
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	27267	27662	.	-	0	ID=cds-WP_107388098.1;Parent=gene-RM588_RS08255;Dbxref=GenBank:WP_107388098.1;Name=WP_107388098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08255;product=hypothetical protein;protein_id=WP_107388098.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	27940	28953	.	-	.	ID=gene-RM588_RS08260;Name=RM588_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08260;old_locus_tag=RM588_08255
NZ_JAVRJR010000005.1	Protein Homology	CDS	27940	28953	.	-	0	ID=cds-WP_136732115.1;Parent=gene-RM588_RS08260;Dbxref=GenBank:WP_136732115.1;Name=WP_136732115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215650.1;locus_tag=RM588_RS08260;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_136732115.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	29168	29845	.	+	.	ID=gene-RM588_RS08265;Name=RM588_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08265;old_locus_tag=RM588_08260
NZ_JAVRJR010000005.1	Protein Homology	CDS	29168	29845	.	+	0	ID=cds-WP_037577090.1;Parent=gene-RM588_RS08265;Dbxref=GenBank:WP_037577090.1;Name=WP_037577090.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478666.1;locus_tag=RM588_RS08265;product=response regulator transcription factor;protein_id=WP_037577090.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	29838	31313	.	+	.	ID=gene-RM588_RS08270;Name=RM588_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08270;old_locus_tag=RM588_08265
NZ_JAVRJR010000005.1	Protein Homology	CDS	29838	31313	.	+	0	ID=cds-WP_037577087.1;Parent=gene-RM588_RS08270;Dbxref=GenBank:WP_037577087.1;Name=WP_037577087.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.7;locus_tag=RM588_RS08270;product=sensor histidine kinase;protein_id=WP_037577087.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	31543	31977	.	-	.	ID=gene-RM588_RS08275;Name=RM588_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08275;old_locus_tag=RM588_08270
NZ_JAVRJR010000005.1	Protein Homology	CDS	31543	31977	.	-	0	ID=cds-WP_037577085.1;Parent=gene-RM588_RS08275;Dbxref=GenBank:WP_037577085.1;Name=WP_037577085.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: protein motif:HMM:NF015925.7;locus_tag=RM588_RS08275;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_037577085.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	32197	33684	.	-	.	ID=gene-RM588_RS08280;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM588_RS08280;old_locus_tag=RM588_08275
NZ_JAVRJR010000005.1	Protein Homology	CDS	32197	33684	.	-	0	ID=cds-WP_107368072.1;Parent=gene-RM588_RS08280;Dbxref=GenBank:WP_107368072.1;Name=WP_107368072.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729705.1;locus_tag=RM588_RS08280;product=cardiolipin synthase;protein_id=WP_107368072.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	34436	35365	.	+	.	ID=gene-RM588_RS08285;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=RM588_RS08285;old_locus_tag=RM588_08280
NZ_JAVRJR010000005.1	Protein Homology	CDS	34436	35365	.	+	0	ID=cds-WP_051605031.1;Parent=gene-RM588_RS08285;Dbxref=GenBank:WP_051605031.1;Name=WP_051605031.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434903.1;locus_tag=RM588_RS08285;product=sphingomyelin phosphodiesterase;protein_id=WP_051605031.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	36052	37212	.	+	.	ID=gene-RM588_RS08290;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=RM588_RS08290;old_locus_tag=RM588_08285
NZ_JAVRJR010000005.1	Protein Homology	CDS	36052	37212	.	+	0	ID=cds-WP_105963285.1;Parent=gene-RM588_RS08290;Dbxref=GenBank:WP_105963285.1;Name=WP_105963285.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=RM588_RS08290;product=poly-gamma-glutamate synthase PgsB;protein_id=WP_105963285.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	37215	37667	.	+	.	ID=gene-RM588_RS08295;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=RM588_RS08295;old_locus_tag=RM588_08290
NZ_JAVRJR010000005.1	Protein Homology	CDS	37215	37667	.	+	0	ID=cds-WP_037577418.1;Parent=gene-RM588_RS08295;Dbxref=GenBank:WP_037577418.1;Name=WP_037577418.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480095.1;locus_tag=RM588_RS08295;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WP_037577418.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	37682	38752	.	+	.	ID=gene-RM588_RS08300;Name=RM588_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08300;old_locus_tag=RM588_08295
NZ_JAVRJR010000005.1	Protein Homology	CDS	37682	38752	.	+	0	ID=cds-WP_311542727.1;Parent=gene-RM588_RS08300;Dbxref=GenBank:WP_311542727.1;Name=WP_311542727.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302327.1;locus_tag=RM588_RS08300;product=CapA family protein;protein_id=WP_311542727.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	38742	39032	.	+	.	ID=gene-RM588_RS08305;Name=RM588_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08305;old_locus_tag=RM588_08300
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	38742	39032	.	+	0	ID=cds-WP_037577412.1;Parent=gene-RM588_RS08305;Dbxref=GenBank:WP_037577412.1;Name=WP_037577412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08305;product=hypothetical protein;protein_id=WP_037577412.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	39016	40614	.	+	.	ID=gene-RM588_RS08310;Name=RM588_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08310;old_locus_tag=RM588_08305
NZ_JAVRJR010000005.1	Protein Homology	CDS	39016	40614	.	+	0	ID=cds-WP_105963283.1;Parent=gene-RM588_RS08310;Dbxref=GenBank:WP_105963283.1;Name=WP_105963283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454841.1;locus_tag=RM588_RS08310;product=gamma-glutamyltransferase;protein_id=WP_105963283.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	40839	43382	.	-	.	ID=gene-RM588_RS08315;Name=RM588_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08315;old_locus_tag=RM588_08310
NZ_JAVRJR010000005.1	Protein Homology	CDS	40839	43382	.	-	0	ID=cds-WP_446289381.1;Parent=gene-RM588_RS08315;Dbxref=GenBank:WP_446289381.1;Name=WP_446289381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450569.1;locus_tag=RM588_RS08315;product=YfhO family protein;protein_id=WP_446289381.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	43682	44335	.	-	.	ID=gene-RM588_RS08320;Name=RM588_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08320;old_locus_tag=RM588_08315
NZ_JAVRJR010000005.1	Protein Homology	CDS	43682	44335	.	-	0	ID=cds-WP_051605030.1;Parent=gene-RM588_RS08320;Dbxref=GenBank:WP_051605030.1;Name=WP_051605030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.7;locus_tag=RM588_RS08320;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_051605030.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	44879	45115	.	+	.	ID=gene-RM588_RS08325;Name=RM588_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08325;old_locus_tag=RM588_08320
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	44879	45115	.	+	0	ID=cds-WP_037577403.1;Parent=gene-RM588_RS08325;Dbxref=GenBank:WP_037577403.1;Name=WP_037577403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08325;product=hypothetical protein;protein_id=WP_037577403.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	45525	45974	.	+	.	ID=gene-RM588_RS11415;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM588_RS11415
NZ_JAVRJR010000005.1	Protein Homology	CDS	45525	45974	.	+	0	ID=cds-WP_446289382.1;Parent=gene-RM588_RS11415;Dbxref=GenBank:WP_446289382.1;Name=WP_446289382.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM588_RS11415;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_446289382.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	46017	47288	.	-	.	ID=gene-RM588_RS08340;Name=RM588_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08340;old_locus_tag=RM588_08335
NZ_JAVRJR010000005.1	Protein Homology	CDS	46017	47288	.	-	0	ID=cds-WP_069191686.1;Parent=gene-RM588_RS08340;Dbxref=GenBank:WP_069191686.1;Name=WP_069191686.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF033912.1;locus_tag=RM588_RS08340;product=mechanosensitive ion channel;protein_id=WP_069191686.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	pseudogene	47408	47494	.	+	.	ID=gene-RM588_RS11425;Name=RM588_RS11425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS11425;partial=true;pseudo=true;start_range=.,47408
NZ_JAVRJR010000005.1	Protein Homology	CDS	47408	47494	.	+	0	ID=cds-RM588_RS11425;Parent=gene-RM588_RS11425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432800.1;locus_tag=RM588_RS11425;partial=true;product=aggregation-promoting factor C-terminal-like domain-containing protein;pseudo=true;start_range=.,47408;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	47633	49228	.	-	.	ID=gene-RM588_RS08345;Name=RM588_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08345;old_locus_tag=RM588_08340
NZ_JAVRJR010000005.1	Protein Homology	CDS	47633	49228	.	-	0	ID=cds-WP_311548142.1;Parent=gene-RM588_RS08345;Dbxref=GenBank:WP_311548142.1;Name=WP_311548142.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274537.1;locus_tag=RM588_RS08345;product=xylulokinase;protein_id=WP_311548142.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	49626	50984	.	+	.	ID=gene-RM588_RS08350;Name=RM588_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08350;old_locus_tag=RM588_08345
NZ_JAVRJR010000005.1	Protein Homology	CDS	49626	50984	.	+	0	ID=cds-WP_311548143.1;Parent=gene-RM588_RS08350;Dbxref=GenBank:WP_311548143.1;Name=WP_311548143.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549730.1;locus_tag=RM588_RS08350;product=alanine/glycine:cation symporter family protein;protein_id=WP_311548143.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	51305	51406	.	+	.	ID=gene-RM588_RS08355;Name=RM588_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08355;old_locus_tag=RM588_08350
NZ_JAVRJR010000005.1	Protein Homology	CDS	51305	51406	.	+	0	ID=cds-WP_107358294.1;Parent=gene-RM588_RS08355;Dbxref=GenBank:WP_107358294.1;Name=WP_107358294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM588_RS08355;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107358294.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	51843	52241	.	+	.	ID=gene-RM588_RS08360;Name=RM588_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08360;old_locus_tag=RM588_08355
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	51843	52241	.	+	0	ID=cds-WP_311548144.1;Parent=gene-RM588_RS08360;Dbxref=GenBank:WP_311548144.1;Name=WP_311548144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08360;product=hypothetical protein;protein_id=WP_311548144.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	52252	52524	.	+	.	ID=gene-RM588_RS11350;Name=RM588_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11350
NZ_JAVRJR010000005.1	Protein Homology	CDS	52252	52524	.	+	0	ID=cds-WP_375713819.1;Parent=gene-RM588_RS11350;Dbxref=GenBank:WP_375713819.1;Name=WP_375713819.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024934.7;locus_tag=RM588_RS11350;product=helix-turn-helix domain-containing protein;protein_id=WP_375713819.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	52501	53127	.	-	.	ID=gene-RM588_RS08365;Name=RM588_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08365;old_locus_tag=RM588_08360
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	52501	53127	.	-	0	ID=cds-WP_105965668.1;Parent=gene-RM588_RS08365;Dbxref=GenBank:WP_105965668.1;Name=WP_105965668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08365;product=hypothetical protein;protein_id=WP_105965668.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	53531	53695	.	-	.	ID=gene-RM588_RS08370;Name=RM588_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08370;old_locus_tag=RM588_08365
NZ_JAVRJR010000005.1	Protein Homology	CDS	53531	53695	.	-	0	ID=cds-WP_311548145.1;Parent=gene-RM588_RS08370;Dbxref=GenBank:WP_311548145.1;Name=WP_311548145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361781.1;locus_tag=RM588_RS08370;product=hypothetical protein;protein_id=WP_311548145.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	54061	54177	.	-	.	ID=gene-RM588_RS08375;Name=RM588_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08375;old_locus_tag=RM588_08370
NZ_JAVRJR010000005.1	Protein Homology	CDS	54061	54177	.	-	0	ID=cds-WP_084276069.1;Parent=gene-RM588_RS08375;Dbxref=GenBank:WP_084276069.1;Name=WP_084276069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022861.7;locus_tag=RM588_RS08375;product=subtilosin A family bacteriocin;protein_id=WP_084276069.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	54513	55907	.	-	.	ID=gene-RM588_RS08380;Name=RM588_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08380;old_locus_tag=RM588_08375
NZ_JAVRJR010000005.1	Protein Homology	CDS	54513	55907	.	-	0	ID=cds-WP_311548146.1;Parent=gene-RM588_RS08380;Dbxref=GenBank:WP_311548146.1;Name=WP_311548146.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901164.1;locus_tag=RM588_RS08380;product=MFS transporter;protein_id=WP_311548146.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	56272	57498	.	-	.	ID=gene-RM588_RS08385;Name=RM588_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08385;old_locus_tag=RM588_08380
NZ_JAVRJR010000005.1	Protein Homology	CDS	56272	57498	.	-	0	ID=cds-WP_311548147.1;Parent=gene-RM588_RS08385;Dbxref=GenBank:WP_311548147.1;Name=WP_311548147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503250.1;locus_tag=RM588_RS08385;product=ArgE/DapE family deacylase;protein_id=WP_311548147.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	57523	58956	.	-	.	ID=gene-RM588_RS08390;Name=RM588_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08390;old_locus_tag=RM588_08385
NZ_JAVRJR010000005.1	Protein Homology	CDS	57523	58956	.	-	0	ID=cds-WP_182474592.1;Parent=gene-RM588_RS08390;Dbxref=GenBank:WP_182474592.1;Name=WP_182474592.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723332.1;locus_tag=RM588_RS08390;product=MDR family MFS transporter;protein_id=WP_182474592.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	59141	60079	.	+	.	ID=gene-RM588_RS08395;Name=RM588_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08395;old_locus_tag=RM588_08390
NZ_JAVRJR010000005.1	Protein Homology	CDS	59141	60079	.	+	0	ID=cds-WP_107366642.1;Parent=gene-RM588_RS08395;Dbxref=GenBank:WP_107366642.1;Name=WP_107366642.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471437.1;locus_tag=RM588_RS08395;product=ketopantoate reductase family protein;protein_id=WP_107366642.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	60146	61099	.	-	.	ID=gene-RM588_RS08400;Name=RM588_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08400;old_locus_tag=RM588_08395
NZ_JAVRJR010000005.1	Protein Homology	CDS	60146	61099	.	-	0	ID=cds-WP_311548148.1;Parent=gene-RM588_RS08400;Dbxref=GenBank:WP_311548148.1;Name=WP_311548148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.8;locus_tag=RM588_RS08400;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_311548148.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	61438	62121	.	+	.	ID=gene-RM588_RS08405;Name=RM588_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08405;old_locus_tag=RM588_08400
NZ_JAVRJR010000005.1	Protein Homology	CDS	61438	62121	.	+	0	ID=cds-WP_103158946.1;Parent=gene-RM588_RS08405;Dbxref=GenBank:WP_103158946.1;Name=WP_103158946.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: protein motif:HMM:NF015277.7;locus_tag=RM588_RS08405;product=acetolactate decarboxylase;protein_id=WP_103158946.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	62493	64085	.	-	.	ID=gene-RM588_RS08410;Name=RM588_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08410;old_locus_tag=RM588_08405
NZ_JAVRJR010000005.1	Protein Homology	CDS	62493	64085	.	-	0	ID=cds-WP_119513124.1;Parent=gene-RM588_RS08410;Dbxref=GenBank:WP_119513124.1;Name=WP_119513124.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=RM588_RS08410;product=solute:sodium symporter family transporter;protein_id=WP_119513124.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	64486	65037	.	-	.	ID=gene-RM588_RS08415;Name=RM588_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08415;old_locus_tag=RM588_08410
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	64486	65037	.	-	0	ID=cds-WP_103158945.1;Parent=gene-RM588_RS08415;Dbxref=GenBank:WP_103158945.1;Name=WP_103158945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08415;product=hypothetical protein;protein_id=WP_103158945.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	65633	67372	.	+	.	ID=gene-RM588_RS08420;Name=RM588_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08420;old_locus_tag=RM588_08415
NZ_JAVRJR010000005.1	Protein Homology	CDS	65633	67372	.	+	0	ID=cds-WP_105996907.1;Parent=gene-RM588_RS08420;Dbxref=GenBank:WP_105996907.1;Name=WP_105996907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473186.1;locus_tag=RM588_RS08420;product=DUF2075 domain-containing protein;protein_id=WP_105996907.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	67368	67700	.	+	.	ID=gene-RM588_RS08425;Name=RM588_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08425;old_locus_tag=RM588_08420
NZ_JAVRJR010000005.1	Protein Homology	CDS	67368	67700	.	+	0	ID=cds-WP_105963359.1;Parent=gene-RM588_RS08425;Dbxref=GenBank:WP_105963359.1;Name=WP_105963359.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274571.1;locus_tag=RM588_RS08425;product=nucleotide pyrophosphohydrolase;protein_id=WP_105963359.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	67943	69739	.	+	.	ID=gene-RM588_RS08430;Name=RM588_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08430;old_locus_tag=RM588_08425
NZ_JAVRJR010000005.1	Protein Homology	CDS	67943	69739	.	+	0	ID=cds-WP_311548149.1;Parent=gene-RM588_RS08430;Dbxref=GenBank:WP_311548149.1;Name=WP_311548149.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379833.1;locus_tag=RM588_RS08430;product=acyltransferase family protein;protein_id=WP_311548149.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	69891	70601	.	+	.	ID=gene-RM588_RS08435;Name=RM588_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08435;old_locus_tag=RM588_08430
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	69891	70601	.	+	0	ID=cds-WP_103159189.1;Parent=gene-RM588_RS08435;Dbxref=GenBank:WP_103159189.1;Name=WP_103159189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08435;product=hypothetical protein;protein_id=WP_103159189.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	70702	71916	.	-	.	ID=gene-RM588_RS08440;Name=RM588_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08440;old_locus_tag=RM588_08435
NZ_JAVRJR010000005.1	Protein Homology	CDS	70702	71916	.	-	0	ID=cds-WP_311548153.1;Parent=gene-RM588_RS08440;Dbxref=GenBank:WP_311548153.1;Name=WP_311548153.1;Ontology_term=GO:0006631,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF006143.0;locus_tag=RM588_RS08440;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_311548153.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	72313	72873	.	-	.	ID=gene-RM588_RS08445;Name=RM588_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08445;old_locus_tag=RM588_08440
NZ_JAVRJR010000005.1	Protein Homology	CDS	72313	72873	.	-	0	ID=cds-WP_103159191.1;Parent=gene-RM588_RS08445;Dbxref=GenBank:WP_103159191.1;Name=WP_103159191.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.7;locus_tag=RM588_RS08445;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103159191.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	72884	73675	.	-	.	ID=gene-RM588_RS08450;Name=RM588_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08450;old_locus_tag=RM588_08445
NZ_JAVRJR010000005.1	Protein Homology	CDS	72884	73675	.	-	0	ID=cds-WP_037576189.1;Parent=gene-RM588_RS08450;Dbxref=GenBank:WP_037576189.1;Name=WP_037576189.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638060.1;locus_tag=RM588_RS08450;product=arylamine N-acetyltransferase family protein;protein_id=WP_037576189.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	73945	74496	.	+	.	ID=gene-RM588_RS08455;Name=RM588_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08455;old_locus_tag=RM588_08450
NZ_JAVRJR010000005.1	Protein Homology	CDS	73945	74496	.	+	0	ID=cds-WP_037576192.1;Parent=gene-RM588_RS08455;Dbxref=GenBank:WP_037576192.1;Name=WP_037576192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606891.1;locus_tag=RM588_RS08455;product=isochorismatase family protein;protein_id=WP_037576192.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	74508	75701	.	+	.	ID=gene-RM588_RS08460;Name=tcaB;gbkey=Gene;gene=tcaB;gene_biotype=protein_coding;locus_tag=RM588_RS08460;old_locus_tag=RM588_08455
NZ_JAVRJR010000005.1	Protein Homology	CDS	74508	75701	.	+	0	ID=cds-WP_311548150.1;Parent=gene-RM588_RS08460;Dbxref=GenBank:WP_311548150.1;Name=WP_311548150.1;gbkey=CDS;gene=tcaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168887.1;locus_tag=RM588_RS08460;product=putative multidrug effflux MFS transporter TcaB;protein_id=WP_311548150.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	75999	76892	.	+	.	ID=gene-RM588_RS08465;Name=RM588_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08465;old_locus_tag=RM588_08460
NZ_JAVRJR010000005.1	Protein Homology	CDS	75999	76892	.	+	0	ID=cds-WP_103159195.1;Parent=gene-RM588_RS08465;Dbxref=GenBank:WP_103159195.1;Name=WP_103159195.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471440.1;locus_tag=RM588_RS08465;product=fructose bisphosphate aldolase;protein_id=WP_103159195.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	pseudogene	76939	77937	.	-	.	ID=gene-RM588_RS08470;Name=RM588_RS08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS08470;old_locus_tag=RM588_08465;partial=true;pseudo=true;start_range=.,76939
NZ_JAVRJR010000005.1	Protein Homology	CDS	76939	77937	.	-	0	ID=cds-RM588_RS08470;Parent=gene-RM588_RS08470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727767.1;locus_tag=RM588_RS08470;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;start_range=.,76939;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	78139	79152	.	+	.	ID=gene-RM588_RS08475;Name=RM588_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08475;old_locus_tag=RM588_08470
NZ_JAVRJR010000005.1	Protein Homology	CDS	78139	79152	.	+	0	ID=cds-WP_311540411.1;Parent=gene-RM588_RS08475;Dbxref=GenBank:WP_311540411.1;Name=WP_311540411.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019474.7;locus_tag=RM588_RS08475;product=alpha/beta hydrolase;protein_id=WP_311540411.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	79198	80361	.	-	.	ID=gene-RM588_RS08480;Name=RM588_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08480;old_locus_tag=RM588_08475
NZ_JAVRJR010000005.1	Protein Homology	CDS	79198	80361	.	-	0	ID=cds-WP_105965660.1;Parent=gene-RM588_RS08480;Dbxref=GenBank:WP_105965660.1;Name=WP_105965660.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=RM588_RS08480;product=MFS transporter;protein_id=WP_105965660.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	80640	81332	.	-	.	ID=gene-RM588_RS08485;Name=RM588_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08485;old_locus_tag=RM588_08480
NZ_JAVRJR010000005.1	Protein Homology	CDS	80640	81332	.	-	0	ID=cds-WP_105965659.1;Parent=gene-RM588_RS08485;Dbxref=GenBank:WP_105965659.1;Name=WP_105965659.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426012.1;locus_tag=RM588_RS08485;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_105965659.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	81464	81616	.	-	.	ID=gene-RM588_RS08490;Name=RM588_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08490;old_locus_tag=RM588_08485
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	81464	81616	.	-	0	ID=cds-WP_157946192.1;Parent=gene-RM588_RS08490;Dbxref=GenBank:WP_157946192.1;Name=WP_157946192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08490;product=hypothetical protein;protein_id=WP_157946192.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	81633	82910	.	-	.	ID=gene-RM588_RS08495;Name=RM588_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08495;old_locus_tag=RM588_08490
NZ_JAVRJR010000005.1	Protein Homology	CDS	81633	82910	.	-	0	ID=cds-WP_105965658.1;Parent=gene-RM588_RS08495;Dbxref=GenBank:WP_105965658.1;Name=WP_105965658.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012984981.1;locus_tag=RM588_RS08495;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_105965658.1;transl_table=11
NZ_JAVRJR010000005.1	cmsearch	riboswitch	82971	83068	.	-	.	ID=id-NZ_JAVRJR010000005.1:82971..83068;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000005.1	RefSeq	gene	83323	84597	.	+	.	ID=gene-RM588_RS08500;Name=RM588_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08500;old_locus_tag=RM588_08495
NZ_JAVRJR010000005.1	Protein Homology	CDS	83323	84597	.	+	0	ID=cds-WP_172458455.1;Parent=gene-RM588_RS08500;Dbxref=GenBank:WP_172458455.1;Name=WP_172458455.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=RM588_RS08500;product=YSIRK-type signal peptide-containing protein;protein_id=WP_172458455.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	84707	86053	.	-	.	ID=gene-RM588_RS08505;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=RM588_RS08505;old_locus_tag=RM588_08500
NZ_JAVRJR010000005.1	Protein Homology	CDS	84707	86053	.	-	0	ID=cds-WP_311540414.1;Parent=gene-RM588_RS08505;Dbxref=GenBank:WP_311540414.1;Name=WP_311540414.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167037.1;locus_tag=RM588_RS08505;product=PTS ascorbate transporter subunit IIC;protein_id=WP_311540414.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	86071	86355	.	-	.	ID=gene-RM588_RS08510;Name=RM588_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08510;old_locus_tag=RM588_08505
NZ_JAVRJR010000005.1	Protein Homology	CDS	86071	86355	.	-	0	ID=cds-WP_037576225.1;Parent=gene-RM588_RS08510;Dbxref=GenBank:WP_037576225.1;Name=WP_037576225.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498901.1;locus_tag=RM588_RS08510;product=PTS sugar transporter subunit IIB;protein_id=WP_037576225.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	86357	86800	.	-	.	ID=gene-RM588_RS08515;Name=RM588_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08515;old_locus_tag=RM588_08510
NZ_JAVRJR010000005.1	Protein Homology	CDS	86357	86800	.	-	0	ID=cds-WP_103159202.1;Parent=gene-RM588_RS08515;Dbxref=GenBank:WP_103159202.1;Name=WP_103159202.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191793.1;locus_tag=RM588_RS08515;product=PTS sugar transporter subunit IIA;protein_id=WP_103159202.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	86802	88745	.	-	.	ID=gene-RM588_RS08520;Name=RM588_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08520;old_locus_tag=RM588_08515
NZ_JAVRJR010000005.1	Protein Homology	CDS	86802	88745	.	-	0	ID=cds-WP_311540416.1;Parent=gene-RM588_RS08520;Dbxref=GenBank:WP_311540416.1;Name=WP_311540416.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF012579.7;locus_tag=RM588_RS08520;product=BglG family transcription antiterminator;protein_id=WP_311540416.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	89057	90436	.	-	.	ID=gene-RM588_RS08525;Name=RM588_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08525;old_locus_tag=RM588_08520
NZ_JAVRJR010000005.1	Protein Homology	CDS	89057	90436	.	-	0	ID=cds-WP_037576236.1;Parent=gene-RM588_RS08525;Dbxref=GenBank:WP_037576236.1;Name=WP_037576236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471268.1;locus_tag=RM588_RS08525;product=YjiH family protein;protein_id=WP_037576236.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	90815	92818	.	-	.	ID=gene-RM588_RS08530;Name=RM588_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08530;old_locus_tag=RM588_08525
NZ_JAVRJR010000005.1	Protein Homology	CDS	90815	92818	.	-	0	ID=cds-WP_107363679.1;Parent=gene-RM588_RS08530;Dbxref=GenBank:WP_107363679.1;Name=WP_107363679.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174984.1;locus_tag=RM588_RS08530;product=cation:proton antiporter;protein_id=WP_107363679.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	92843	93334	.	-	.	ID=gene-RM588_RS08535;Name=RM588_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08535;old_locus_tag=RM588_08530
NZ_JAVRJR010000005.1	Protein Homology	CDS	92843	93334	.	-	0	ID=cds-WP_037576242.1;Parent=gene-RM588_RS08535;Dbxref=GenBank:WP_037576242.1;Name=WP_037576242.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901524.1;locus_tag=RM588_RS08535;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_037576242.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	93419	94321	.	-	.	ID=gene-RM588_RS08540;Name=RM588_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08540;old_locus_tag=RM588_08535
NZ_JAVRJR010000005.1	Protein Homology	CDS	93419	94321	.	-	0	ID=cds-WP_107366355.1;Parent=gene-RM588_RS08540;Dbxref=GenBank:WP_107366355.1;Name=WP_107366355.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444833.1;locus_tag=RM588_RS08540;product=LysR family transcriptional regulator;protein_id=WP_107366355.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	94441	95628	.	+	.	ID=gene-RM588_RS08545;Name=RM588_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08545;old_locus_tag=RM588_08540
NZ_JAVRJR010000005.1	Protein Homology	CDS	94441	95628	.	+	0	ID=cds-WP_268216909.1;Parent=gene-RM588_RS08545;Dbxref=GenBank:WP_268216909.1;Name=WP_268216909.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303799.1;locus_tag=RM588_RS08545;product=MFS transporter;protein_id=WP_268216909.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	96218	97132	.	-	.	ID=gene-RM588_RS08550;Name=RM588_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08550;old_locus_tag=RM588_08545
NZ_JAVRJR010000005.1	Protein Homology	CDS	96218	97132	.	-	0	ID=cds-WP_037576250.1;Parent=gene-RM588_RS08550;Dbxref=GenBank:WP_037576250.1;Name=WP_037576250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003185844.1;locus_tag=RM588_RS08550;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_037576250.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	97151	98089	.	-	.	ID=gene-RM588_RS08555;Name=RM588_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08555;old_locus_tag=RM588_08550
NZ_JAVRJR010000005.1	Protein Homology	CDS	97151	98089	.	-	0	ID=cds-WP_103159209.1;Parent=gene-RM588_RS08555;Dbxref=GenBank:WP_103159209.1;Name=WP_103159209.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274507.1;locus_tag=RM588_RS08555;product=ABC transporter permease subunit;protein_id=WP_103159209.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	98070	99566	.	-	.	ID=gene-RM588_RS08560;Name=RM588_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08560;old_locus_tag=RM588_08555
NZ_JAVRJR010000005.1	Protein Homology	CDS	98070	99566	.	-	0	ID=cds-WP_105963258.1;Parent=gene-RM588_RS08560;Dbxref=GenBank:WP_105963258.1;Name=WP_105963258.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930523.1;locus_tag=RM588_RS08560;product=sugar ABC transporter ATP-binding protein;protein_id=WP_105963258.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	99579	99968	.	-	.	ID=gene-RM588_RS08565;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=RM588_RS08565;old_locus_tag=RM588_08560
NZ_JAVRJR010000005.1	Protein Homology	CDS	99579	99968	.	-	0	ID=cds-WP_233650132.1;Parent=gene-RM588_RS08565;Dbxref=GenBank:WP_233650132.1;Name=WP_233650132.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274505.1;locus_tag=RM588_RS08565;product=D-ribose pyranase;protein_id=WP_233650132.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	99961	100842	.	-	.	ID=gene-RM588_RS08570;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=RM588_RS08570;old_locus_tag=RM588_08565
NZ_JAVRJR010000005.1	Protein Homology	CDS	99961	100842	.	-	0	ID=cds-WP_105965651.1;Parent=gene-RM588_RS08570;Dbxref=GenBank:WP_105965651.1;Name=WP_105965651.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175513.1;locus_tag=RM588_RS08570;product=ribokinase;protein_id=WP_105965651.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	100845	101810	.	-	.	ID=gene-RM588_RS08575;Name=RM588_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08575;old_locus_tag=RM588_08570
NZ_JAVRJR010000005.1	Protein Homology	CDS	100845	101810	.	-	0	ID=cds-WP_105963256.1;Parent=gene-RM588_RS08575;Dbxref=GenBank:WP_105963256.1;Name=WP_105963256.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729725.1;locus_tag=RM588_RS08575;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_105963256.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	101938	103278	.	-	.	ID=gene-RM588_RS08580;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=RM588_RS08580;old_locus_tag=RM588_08575
NZ_JAVRJR010000005.1	Protein Homology	CDS	101938	103278	.	-	0	ID=cds-WP_105992360.1;Parent=gene-RM588_RS08580;Dbxref=GenBank:WP_105992360.1;Name=WP_105992360.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480193.1;locus_tag=RM588_RS08580;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_105992360.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	103291	104370	.	-	.	ID=gene-RM588_RS08585;Name=RM588_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08585;old_locus_tag=RM588_08580
NZ_JAVRJR010000005.1	Protein Homology	CDS	103291	104370	.	-	0	ID=cds-WP_037576272.1;Parent=gene-RM588_RS08585;Dbxref=GenBank:WP_037576272.1;Name=WP_037576272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236144.1;locus_tag=RM588_RS08585;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_037576272.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	104508	104768	.	+	.	ID=gene-RM588_RS08590;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=RM588_RS08590;old_locus_tag=RM588_08585
NZ_JAVRJR010000005.1	Protein Homology	CDS	104508	104768	.	+	0	ID=cds-WP_037576274.1;Parent=gene-RM588_RS08590;Dbxref=GenBank:WP_037576274.1;Name=WP_037576274.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911203.1;locus_tag=RM588_RS08590;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_037576274.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	104771	105523	.	+	.	ID=gene-RM588_RS08595;Name=RM588_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08595;old_locus_tag=RM588_08590
NZ_JAVRJR010000005.1	Protein Homology	CDS	104771	105523	.	+	0	ID=cds-WP_103159212.1;Parent=gene-RM588_RS08595;Dbxref=GenBank:WP_103159212.1;Name=WP_103159212.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501965.1;locus_tag=RM588_RS08595;product=sulfite exporter TauE/SafE family protein;protein_id=WP_103159212.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	105563	106879	.	-	.	ID=gene-RM588_RS08600;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=RM588_RS08600;old_locus_tag=RM588_08595
NZ_JAVRJR010000005.1	Protein Homology	CDS	105563	106879	.	-	0	ID=cds-WP_103159213.1;Parent=gene-RM588_RS08600;Dbxref=GenBank:WP_103159213.1;Name=WP_103159213.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166861.1;locus_tag=RM588_RS08600;product=hypothiocyanous acid reductase MerA;protein_id=WP_103159213.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	106876	107304	.	-	.	ID=gene-RM588_RS08605;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=RM588_RS08605;old_locus_tag=RM588_08600
NZ_JAVRJR010000005.1	Protein Homology	CDS	106876	107304	.	-	0	ID=cds-WP_103159214.1;Parent=gene-RM588_RS08605;Dbxref=GenBank:WP_103159214.1;Name=WP_103159214.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480215.1;locus_tag=RM588_RS08605;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_103159214.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	107610	108074	.	-	.	ID=gene-RM588_RS08610;Name=RM588_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08610;old_locus_tag=RM588_08605
NZ_JAVRJR010000005.1	GeneMarkS-2+	CDS	107610	108074	.	-	0	ID=cds-WP_105965647.1;Parent=gene-RM588_RS08610;Dbxref=GenBank:WP_105965647.1;Name=WP_105965647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08610;product=P-loop NTPase family protein;protein_id=WP_105965647.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	108087	108749	.	-	.	ID=gene-RM588_RS08615;Name=RM588_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08615;old_locus_tag=RM588_08610
NZ_JAVRJR010000005.1	Protein Homology	CDS	108087	108749	.	-	0	ID=cds-WP_105965646.1;Parent=gene-RM588_RS08615;Dbxref=GenBank:WP_105965646.1;Name=WP_105965646.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274491.1;locus_tag=RM588_RS08615;product=ABC transporter ATP-binding protein;protein_id=WP_105965646.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	108762	109811	.	-	.	ID=gene-RM588_RS08620;Name=RM588_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08620;old_locus_tag=RM588_08615
NZ_JAVRJR010000005.1	Protein Homology	CDS	108762	109811	.	-	0	ID=cds-WP_105965645.1;Parent=gene-RM588_RS08620;Dbxref=GenBank:WP_105965645.1;Name=WP_105965645.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477932.1;locus_tag=RM588_RS08620;product=ABC transporter permease;protein_id=WP_105965645.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	110031	111614	.	+	.	ID=gene-RM588_RS08625;Name=fadX;gbkey=Gene;gene=fadX;gene_biotype=protein_coding;locus_tag=RM588_RS08625;old_locus_tag=RM588_08620
NZ_JAVRJR010000005.1	Protein Homology	CDS	110031	111614	.	+	0	ID=cds-WP_105965644.1;Parent=gene-RM588_RS08625;Dbxref=GenBank:WP_105965644.1;Name=WP_105965644.1;gbkey=CDS;gene=fadX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000993.1;locus_tag=RM588_RS08625;product=fatty acid degradation protein FadX;protein_id=WP_105965644.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	pseudogene	111734	112672	.	+	.	ID=gene-RM588_RS08630;Name=RM588_RS08630;end_range=112672,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS08630;old_locus_tag=RM588_08625;partial=true;pseudo=true
NZ_JAVRJR010000005.1	Protein Homology	CDS	111734	112672	.	+	0	ID=cds-RM588_RS08630;Parent=gene-RM588_RS08630;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016874;end_range=112672,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498795.1;locus_tag=RM588_RS08630;partial=true;product=class I adenylate-forming enzyme family protein;pseudo=true;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	112799	113689	.	-	.	ID=gene-RM588_RS08635;Name=RM588_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08635;old_locus_tag=RM588_08630
NZ_JAVRJR010000005.1	Protein Homology	CDS	112799	113689	.	-	0	ID=cds-WP_119513104.1;Parent=gene-RM588_RS08635;Dbxref=GenBank:WP_119513104.1;Name=WP_119513104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020062552.1;locus_tag=RM588_RS08635;product=PhzF family protein;protein_id=WP_119513104.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	114254	115594	.	-	.	ID=gene-RM588_RS08640;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=RM588_RS08640;old_locus_tag=RM588_08635
NZ_JAVRJR010000005.1	Protein Homology	CDS	114254	115594	.	-	0	ID=cds-WP_119513102.1;Parent=gene-RM588_RS08640;Dbxref=GenBank:WP_119513102.1;Name=WP_119513102.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220167.1;locus_tag=RM588_RS08640;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_119513102.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	115587	117092	.	-	.	ID=gene-RM588_RS08645;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=RM588_RS08645;old_locus_tag=RM588_08640
NZ_JAVRJR010000005.1	Protein Homology	CDS	115587	117092	.	-	0	ID=cds-WP_037576294.1;Parent=gene-RM588_RS08645;Dbxref=GenBank:WP_037576294.1;Name=WP_037576294.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804521.1;locus_tag=RM588_RS08645;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_037576294.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	117108	119498	.	-	.	ID=gene-RM588_RS08650;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=RM588_RS08650;old_locus_tag=RM588_08645
NZ_JAVRJR010000005.1	Protein Homology	CDS	117108	119498	.	-	0	ID=cds-WP_165806245.1;Parent=gene-RM588_RS08650;Dbxref=GenBank:WP_165806245.1;Name=WP_165806245.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729739.1;locus_tag=RM588_RS08650;product=accessory Sec system translocase SecA2;protein_id=WP_165806245.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	119488	120399	.	-	.	ID=gene-RM588_RS08655;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=RM588_RS08655;old_locus_tag=RM588_08650
NZ_JAVRJR010000005.1	Protein Homology	CDS	119488	120399	.	-	0	ID=cds-WP_311548151.1;Parent=gene-RM588_RS08655;Dbxref=GenBank:WP_311548151.1;Name=WP_311548151.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: protein motif:HMM:TIGR03711.1;locus_tag=RM588_RS08655;product=accessory Sec system protein Asp3;protein_id=WP_311548151.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	120389	121948	.	-	.	ID=gene-RM588_RS08660;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=RM588_RS08660;old_locus_tag=RM588_08655
NZ_JAVRJR010000005.1	Protein Homology	CDS	120389	121948	.	-	0	ID=cds-WP_107367913.1;Parent=gene-RM588_RS08660;Dbxref=GenBank:WP_107367913.1;Name=WP_107367913.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137453.1;locus_tag=RM588_RS08660;product=accessory Sec system protein Asp2;protein_id=WP_107367913.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	121938	123494	.	-	.	ID=gene-RM588_RS08665;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=RM588_RS08665;old_locus_tag=RM588_08660
NZ_JAVRJR010000005.1	Protein Homology	CDS	121938	123494	.	-	0	ID=cds-WP_311548152.1;Parent=gene-RM588_RS08665;Dbxref=GenBank:WP_311548152.1;Name=WP_311548152.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425978.1;locus_tag=RM588_RS08665;product=accessory Sec system protein Asp1;protein_id=WP_311548152.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	123506	124729	.	-	.	ID=gene-RM588_RS08670;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=RM588_RS08670;old_locus_tag=RM588_08665
NZ_JAVRJR010000005.1	Protein Homology	CDS	123506	124729	.	-	0	ID=cds-WP_107367914.1;Parent=gene-RM588_RS08670;Dbxref=GenBank:WP_107367914.1;Name=WP_107367914.1;gbkey=CDS;gene=secY2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167352.1;locus_tag=RM588_RS08670;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_107367914.1;transl_table=11
NZ_JAVRJR010000005.1	RefSeq	gene	124840	126909	.	-	.	ID=gene-RM588_RS08675;Name=RM588_RS08675;end_range=126909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08675;old_locus_tag=RM588_08670;partial=true
NZ_JAVRJR010000005.1	Protein Homology	CDS	124840	126909	.	-	0	ID=cds-WP_311548154.1;Parent=gene-RM588_RS08675;Dbxref=GenBank:WP_311548154.1;Name=WP_311548154.1;Ontology_term=GO:0005576;end_range=126909,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044537.1;locus_tag=RM588_RS08675;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_311548154.1;transl_table=11
##sequence-region NZ_JAVRJR010000006.1 1 116687
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000006.1	RefSeq	region	1	116687	.	+	.	ID=NZ_JAVRJR010000006.1:1..116687;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000006.1	RefSeq	pseudogene	1	438	.	+	.	ID=gene-RM588_RS08680;Name=RM588_RS08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS08680;old_locus_tag=RM588_08675;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJR010000006.1	Protein Homology	CDS	1	438	.	+	0	ID=cds-RM588_RS08680;Parent=gene-RM588_RS08680;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498701.1;locus_tag=RM588_RS08680;partial=true;product=phosphopentomutase;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	496	828	.	-	.	ID=gene-RM588_RS08685;Name=RM588_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08685;old_locus_tag=RM588_08680
NZ_JAVRJR010000006.1	Protein Homology	CDS	496	828	.	-	0	ID=cds-WP_136732194.1;Parent=gene-RM588_RS08685;Dbxref=GenBank:WP_136732194.1;Name=WP_136732194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495128.1;locus_tag=RM588_RS08685;product=hypothetical protein;protein_id=WP_136732194.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	1544	2905	.	-	.	ID=gene-RM588_RS08690;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=RM588_RS08690;old_locus_tag=RM588_08685
NZ_JAVRJR010000006.1	Protein Homology	CDS	1544	2905	.	-	0	ID=cds-WP_103159691.1;Parent=gene-RM588_RS08690;Dbxref=GenBank:WP_103159691.1;Name=WP_103159691.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016913109.1;locus_tag=RM588_RS08690;product=glycerol-3-phosphate transporter;protein_id=WP_103159691.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	3269	3877	.	-	.	ID=gene-RM588_RS08695;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=RM588_RS08695;old_locus_tag=RM588_08690
NZ_JAVRJR010000006.1	Protein Homology	CDS	3269	3877	.	-	0	ID=cds-WP_105963308.1;Parent=gene-RM588_RS08695;Dbxref=GenBank:WP_105963308.1;Name=WP_105963308.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438013.1;locus_tag=RM588_RS08695;product=adenylyl-sulfate kinase;protein_id=WP_105963308.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	3893	5068	.	-	.	ID=gene-RM588_RS08700;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=RM588_RS08700;old_locus_tag=RM588_08695
NZ_JAVRJR010000006.1	Protein Homology	CDS	3893	5068	.	-	0	ID=cds-WP_105963309.1;Parent=gene-RM588_RS08700;Dbxref=GenBank:WP_105963309.1;Name=WP_105963309.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438012.1;locus_tag=RM588_RS08700;product=sulfate adenylyltransferase;protein_id=WP_105963309.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	5083	5979	.	-	.	ID=gene-RM588_RS08705;Name=RM588_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08705;old_locus_tag=RM588_08700
NZ_JAVRJR010000006.1	Protein Homology	CDS	5083	5979	.	-	0	ID=cds-WP_105965689.1;Parent=gene-RM588_RS08705;Dbxref=GenBank:WP_105965689.1;Name=WP_105965689.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303994.1;locus_tag=RM588_RS08705;product=sulfite exporter TauE/SafE family protein;protein_id=WP_105965689.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	6017	6784	.	-	.	ID=gene-RM588_RS08710;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM588_RS08710;old_locus_tag=RM588_08705
NZ_JAVRJR010000006.1	Protein Homology	CDS	6017	6784	.	-	0	ID=cds-WP_037576086.1;Parent=gene-RM588_RS08710;Dbxref=GenBank:WP_037576086.1;Name=WP_037576086.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449255.1;locus_tag=RM588_RS08710;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_037576086.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	6817	8547	.	-	.	ID=gene-RM588_RS08715;Name=RM588_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08715;old_locus_tag=RM588_08710
NZ_JAVRJR010000006.1	Protein Homology	CDS	6817	8547	.	-	0	ID=cds-WP_037576079.1;Parent=gene-RM588_RS08715;Dbxref=GenBank:WP_037576079.1;Name=WP_037576079.1;Ontology_term=GO:0008652,GO:0004783,GO:0051536;gbkey=CDS;go_function=sulfite reductase (NADPH) activity|0004783||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492400.1;locus_tag=RM588_RS08715;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=WP_037576079.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	8572	10440	.	-	.	ID=gene-RM588_RS08720;Name=RM588_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08720;old_locus_tag=RM588_08715
NZ_JAVRJR010000006.1	Protein Homology	CDS	8572	10440	.	-	0	ID=cds-WP_105966068.1;Parent=gene-RM588_RS08720;Dbxref=GenBank:WP_105966068.1;Name=WP_105966068.1;Ontology_term=GO:0006790,GO:0019344,GO:0004783,GO:0010181,GO:0050660,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfur compound metabolic process|0006790||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=RM588_RS08720;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_105966068.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	10519	11241	.	-	.	ID=gene-RM588_RS08725;Name=RM588_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08725;old_locus_tag=RM588_08720
NZ_JAVRJR010000006.1	Protein Homology	CDS	10519	11241	.	-	0	ID=cds-WP_107388826.1;Parent=gene-RM588_RS08725;Dbxref=GenBank:WP_107388826.1;Name=WP_107388826.1;Ontology_term=GO:0000103,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000080.1;locus_tag=RM588_RS08725;product=phosphoadenylyl-sulfate reductase;protein_id=WP_107388826.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	11597	12565	.	+	.	ID=gene-RM588_RS08730;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=RM588_RS08730;old_locus_tag=RM588_08725
NZ_JAVRJR010000006.1	Protein Homology	CDS	11597	12565	.	+	0	ID=cds-WP_037576070.1;Parent=gene-RM588_RS08730;Dbxref=GenBank:WP_037576070.1;Name=WP_037576070.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433253.1;locus_tag=RM588_RS08730;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_037576070.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	12579	13154	.	+	.	ID=gene-RM588_RS08735;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=RM588_RS08735;old_locus_tag=RM588_08730
NZ_JAVRJR010000006.1	Protein Homology	CDS	12579	13154	.	+	0	ID=cds-WP_136732192.1;Parent=gene-RM588_RS08735;Dbxref=GenBank:WP_136732192.1;Name=WP_136732192.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464360.1;locus_tag=RM588_RS08735;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_136732192.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	13156	13521	.	+	.	ID=gene-RM588_RS08740;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=RM588_RS08740;old_locus_tag=RM588_08735
NZ_JAVRJR010000006.1	Protein Homology	CDS	13156	13521	.	+	0	ID=cds-WP_103159683.1;Parent=gene-RM588_RS08740;Dbxref=GenBank:WP_103159683.1;Name=WP_103159683.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612912.1;locus_tag=RM588_RS08740;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_103159683.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	13763	15004	.	+	.	ID=gene-RM588_RS08745;Name=RM588_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08745;old_locus_tag=RM588_08740
NZ_JAVRJR010000006.1	Protein Homology	CDS	13763	15004	.	+	0	ID=cds-WP_136732191.1;Parent=gene-RM588_RS08745;Dbxref=GenBank:WP_136732191.1;Name=WP_136732191.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274967.1;locus_tag=RM588_RS08745;product=aminoacyltransferase;protein_id=WP_136732191.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	15137	15487	.	-	.	ID=gene-RM588_RS08750;Name=RM588_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08750;old_locus_tag=RM588_08745
NZ_JAVRJR010000006.1	Protein Homology	CDS	15137	15487	.	-	0	ID=cds-WP_037576054.1;Parent=gene-RM588_RS08750;Dbxref=GenBank:WP_037576054.1;Name=WP_037576054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426058.1;locus_tag=RM588_RS08750;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_037576054.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	15737	17116	.	+	.	ID=gene-RM588_RS08755;Name=RM588_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08755;old_locus_tag=RM588_08750
NZ_JAVRJR010000006.1	Protein Homology	CDS	15737	17116	.	+	0	ID=cds-WP_103159681.1;Parent=gene-RM588_RS08755;Dbxref=GenBank:WP_103159681.1;Name=WP_103159681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729672.1;locus_tag=RM588_RS08755;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_103159681.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	17143	17439	.	+	.	ID=gene-RM588_RS08760;Name=RM588_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08760;old_locus_tag=RM588_08755
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	17143	17439	.	+	0	ID=cds-WP_037576050.1;Parent=gene-RM588_RS08760;Dbxref=GenBank:WP_037576050.1;Name=WP_037576050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08760;product=hypothetical protein;protein_id=WP_037576050.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	17792	18748	.	+	.	ID=gene-RM588_RS08765;Name=RM588_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08765;old_locus_tag=RM588_08760
NZ_JAVRJR010000006.1	Protein Homology	CDS	17792	18748	.	+	0	ID=cds-WP_311548155.1;Parent=gene-RM588_RS08765;Dbxref=GenBank:WP_311548155.1;Name=WP_311548155.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612917.1;locus_tag=RM588_RS08765;product=alpha/beta hydrolase;protein_id=WP_311548155.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	18780	19538	.	+	.	ID=gene-RM588_RS08770;Name=RM588_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08770;old_locus_tag=RM588_08765
NZ_JAVRJR010000006.1	Protein Homology	CDS	18780	19538	.	+	0	ID=cds-WP_136732190.1;Parent=gene-RM588_RS08770;Dbxref=GenBank:WP_136732190.1;Name=WP_136732190.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.7;locus_tag=RM588_RS08770;product=MerR family transcriptional regulator;protein_id=WP_136732190.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	19705	21678	.	+	.	ID=gene-RM588_RS08775;Name=RM588_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08775;old_locus_tag=RM588_08770
NZ_JAVRJR010000006.1	Protein Homology	CDS	19705	21678	.	+	0	ID=cds-WP_311548156.1;Parent=gene-RM588_RS08775;Dbxref=GenBank:WP_311548156.1;Name=WP_311548156.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480244.1;locus_tag=RM588_RS08775;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_311548156.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	21746	23077	.	-	.	ID=gene-RM588_RS08780;Name=RM588_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08780;old_locus_tag=RM588_08775
NZ_JAVRJR010000006.1	Protein Homology	CDS	21746	23077	.	-	0	ID=cds-WP_051604996.1;Parent=gene-RM588_RS08780;Dbxref=GenBank:WP_051604996.1;Name=WP_051604996.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: protein motif:HMM:NF013954.7;locus_tag=RM588_RS08780;product=glucosaminidase domain-containing protein;protein_id=WP_051604996.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	23270	25018	.	+	.	ID=gene-RM588_RS08785;Name=RM588_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08785;old_locus_tag=RM588_08780
NZ_JAVRJR010000006.1	Protein Homology	CDS	23270	25018	.	+	0	ID=cds-WP_311548157.1;Parent=gene-RM588_RS08785;Dbxref=GenBank:WP_311548157.1;Name=WP_311548157.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.7;locus_tag=RM588_RS08785;product=YhgE/Pip family protein;protein_id=WP_311548157.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	25071	25418	.	+	.	ID=gene-RM588_RS08790;Name=RM588_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08790;old_locus_tag=RM588_08785
NZ_JAVRJR010000006.1	Protein Homology	CDS	25071	25418	.	+	0	ID=cds-WP_037576029.1;Parent=gene-RM588_RS08790;Dbxref=GenBank:WP_037576029.1;Name=WP_037576029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016839079.1;locus_tag=RM588_RS08790;product=DUF2200 domain-containing protein;protein_id=WP_037576029.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	25542	26066	.	-	.	ID=gene-RM588_RS08795;Name=RM588_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08795;old_locus_tag=RM588_08790
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	25542	26066	.	-	0	ID=cds-WP_105965693.1;Parent=gene-RM588_RS08795;Dbxref=GenBank:WP_105965693.1;Name=WP_105965693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08795;product=hypothetical protein;protein_id=WP_105965693.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	26277	26537	.	-	.	ID=gene-RM588_RS11355;Name=RM588_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11355
NZ_JAVRJR010000006.1	Protein Homology	CDS	26277	26537	.	-	0	ID=cds-WP_136732188.1;Parent=gene-RM588_RS11355;Dbxref=GenBank:WP_136732188.1;Name=WP_136732188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018554.7;locus_tag=RM588_RS11355;product=YozE family protein;protein_id=WP_136732188.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	26715	27437	.	+	.	ID=gene-RM588_RS08800;Name=RM588_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08800;old_locus_tag=RM588_08795
NZ_JAVRJR010000006.1	Protein Homology	CDS	26715	27437	.	+	0	ID=cds-WP_037576020.1;Parent=gene-RM588_RS08800;Dbxref=GenBank:WP_037576020.1;Name=WP_037576020.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501364.1;locus_tag=RM588_RS08800;product=epoxyqueuosine reductase QueH;protein_id=WP_037576020.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	27573	29060	.	+	.	ID=gene-RM588_RS08805;Name=RM588_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08805;old_locus_tag=RM588_08800
NZ_JAVRJR010000006.1	Protein Homology	CDS	27573	29060	.	+	0	ID=cds-WP_103159674.1;Parent=gene-RM588_RS08805;Dbxref=GenBank:WP_103159674.1;Name=WP_103159674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219450.1;locus_tag=RM588_RS08805;product=ABC transporter substrate-binding protein;protein_id=WP_103159674.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	29050	30036	.	+	.	ID=gene-RM588_RS08810;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=RM588_RS08810;old_locus_tag=RM588_08805
NZ_JAVRJR010000006.1	Protein Homology	CDS	29050	30036	.	+	0	ID=cds-WP_037576018.1;Parent=gene-RM588_RS08810;Dbxref=GenBank:WP_037576018.1;Name=WP_037576018.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636982.1;locus_tag=RM588_RS08810;product=nickel ABC transporter permease;protein_id=WP_037576018.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	30033	30836	.	+	.	ID=gene-RM588_RS08815;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=RM588_RS08815;old_locus_tag=RM588_08810
NZ_JAVRJR010000006.1	Protein Homology	CDS	30033	30836	.	+	0	ID=cds-WP_051604994.1;Parent=gene-RM588_RS08815;Dbxref=GenBank:WP_051604994.1;Name=WP_051604994.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302255.1;locus_tag=RM588_RS08815;product=nickel transporter permease;protein_id=WP_051604994.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	30838	31608	.	+	.	ID=gene-RM588_RS08820;Name=RM588_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08820;old_locus_tag=RM588_08815
NZ_JAVRJR010000006.1	Protein Homology	CDS	30838	31608	.	+	0	ID=cds-WP_248680344.1;Parent=gene-RM588_RS08820;Dbxref=GenBank:WP_248680344.1;Name=WP_248680344.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612929.1;locus_tag=RM588_RS08820;product=ATP-binding cassette domain-containing protein;protein_id=WP_248680344.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	31605	32294	.	+	.	ID=gene-RM588_RS08825;Name=RM588_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08825;old_locus_tag=RM588_08820
NZ_JAVRJR010000006.1	Protein Homology	CDS	31605	32294	.	+	0	ID=cds-WP_037576014.1;Parent=gene-RM588_RS08825;Dbxref=GenBank:WP_037576014.1;Name=WP_037576014.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=RM588_RS08825;product=ABC transporter ATP-binding protein;protein_id=WP_037576014.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	32407	34572	.	-	.	ID=gene-RM588_RS08830;Name=RM588_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08830;old_locus_tag=RM588_08825
NZ_JAVRJR010000006.1	Protein Homology	CDS	32407	34572	.	-	0	ID=cds-WP_136732184.1;Parent=gene-RM588_RS08830;Dbxref=GenBank:WP_136732184.1;Name=WP_136732184.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447216.1;locus_tag=RM588_RS08830;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_136732184.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	34769	36271	.	+	.	ID=gene-RM588_RS08835;Name=RM588_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08835;old_locus_tag=RM588_08830
NZ_JAVRJR010000006.1	Protein Homology	CDS	34769	36271	.	+	0	ID=cds-WP_158694255.1;Parent=gene-RM588_RS08835;Dbxref=GenBank:WP_158694255.1;Name=WP_158694255.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=RM588_RS08835;product=glycosyltransferase;protein_id=WP_158694255.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	36569	38440	.	+	.	ID=gene-RM588_RS08840;Name=RM588_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08840;old_locus_tag=RM588_08835
NZ_JAVRJR010000006.1	Protein Homology	CDS	36569	38440	.	+	0	ID=cds-WP_311539455.1;Parent=gene-RM588_RS08840;Dbxref=GenBank:WP_311539455.1;Name=WP_311539455.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=RM588_RS08840;product=DUF5776 domain-containing protein;protein_id=WP_311539455.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	38459	39940	.	+	.	ID=gene-RM588_RS08845;Name=RM588_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08845;old_locus_tag=RM588_08840
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	38459	39940	.	+	0	ID=cds-WP_136732181.1;Parent=gene-RM588_RS08845;Dbxref=GenBank:WP_136732181.1;Name=WP_136732181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08845;product=DUF6056 family protein;protein_id=WP_136732181.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	40075	41544	.	-	.	ID=gene-RM588_RS08850;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=RM588_RS08850;old_locus_tag=RM588_08845
NZ_JAVRJR010000006.1	Protein Homology	CDS	40075	41544	.	-	0	ID=cds-WP_311548158.1;Parent=gene-RM588_RS08850;Dbxref=GenBank:WP_311548158.1;Name=WP_311548158.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471199.1;locus_tag=RM588_RS08850;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_311548158.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	41928	43943	.	+	.	ID=gene-RM588_RS08855;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=RM588_RS08855;old_locus_tag=RM588_08850
NZ_JAVRJR010000006.1	Protein Homology	CDS	41928	43943	.	+	0	ID=cds-WP_311548159.1;Parent=gene-RM588_RS08855;Dbxref=GenBank:WP_311548159.1;Name=WP_311548159.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: protein motif:HMM:NF047351.1;locus_tag=RM588_RS08855;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_311548159.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	43914	44195	.	-	.	ID=gene-RM588_RS11360;Name=RM588_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11360
NZ_JAVRJR010000006.1	Protein Homology	CDS	43914	44195	.	-	0	ID=cds-WP_105963364.1;Parent=gene-RM588_RS11360;Dbxref=GenBank:WP_105963364.1;Name=WP_105963364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.7;locus_tag=RM588_RS11360;product=transposase;protein_id=WP_105963364.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	44206	44673	.	+	.	ID=gene-RM588_RS08865;Name=RM588_RS08865;end_range=44673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS08865;old_locus_tag=RM588_08860;partial=true;pseudo=true;start_range=.,44206
NZ_JAVRJR010000006.1	Protein Homology	CDS	44206	44673	.	+	0	ID=cds-RM588_RS08865;Parent=gene-RM588_RS08865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=44673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489261.1;locus_tag=RM588_RS08865;partial=true;product=DUF536 domain-containing protein;pseudo=true;start_range=.,44206;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	44682	45159	.	-	.	ID=gene-RM588_RS08870;Name=RM588_RS08870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS08870;old_locus_tag=RM588_08865;partial=true;pseudo=true;start_range=.,44682
NZ_JAVRJR010000006.1	Protein Homology	CDS	44682	45159	.	-	0	ID=cds-RM588_RS08870;Parent=gene-RM588_RS08870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690624.1;locus_tag=RM588_RS08870;partial=true;product=recombinase family protein;pseudo=true;start_range=.,44682;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	45505	46170	.	-	.	ID=gene-RM588_RS08875;Name=RM588_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08875;old_locus_tag=RM588_08870
NZ_JAVRJR010000006.1	Protein Homology	CDS	45505	46170	.	-	0	ID=cds-WP_107360822.1;Parent=gene-RM588_RS08875;Dbxref=GenBank:WP_107360822.1;Name=WP_107360822.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479812.1;locus_tag=RM588_RS08875;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_107360822.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	46327	47190	.	+	.	ID=gene-RM588_RS08880;Name=RM588_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08880;old_locus_tag=RM588_08875
NZ_JAVRJR010000006.1	Protein Homology	CDS	46327	47190	.	+	0	ID=cds-WP_105963333.1;Parent=gene-RM588_RS08880;Dbxref=GenBank:WP_105963333.1;Name=WP_105963333.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729655.1;locus_tag=RM588_RS08880;product=fructosamine kinase family protein;protein_id=WP_105963333.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	47214	47588	.	+	.	ID=gene-RM588_RS08885;Name=RM588_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08885;old_locus_tag=RM588_08880
NZ_JAVRJR010000006.1	Protein Homology	CDS	47214	47588	.	+	0	ID=cds-WP_037575989.1;Parent=gene-RM588_RS08885;Dbxref=GenBank:WP_037575989.1;Name=WP_037575989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019468.7;locus_tag=RM588_RS08885;product=DUF1648 domain-containing protein;protein_id=WP_037575989.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	47682	48281	.	-	.	ID=gene-RM588_RS08890;Name=RM588_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08890;old_locus_tag=RM588_08885
NZ_JAVRJR010000006.1	Protein Homology	CDS	47682	48281	.	-	0	ID=cds-WP_051604993.1;Parent=gene-RM588_RS08890;Dbxref=GenBank:WP_051604993.1;Name=WP_051604993.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016764.7;locus_tag=RM588_RS08890;product=YIP1 family protein;protein_id=WP_051604993.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	48541	49581	.	+	.	ID=gene-RM588_RS08895;Name=RM588_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08895;old_locus_tag=RM588_08890
NZ_JAVRJR010000006.1	Protein Homology	CDS	48541	49581	.	+	0	ID=cds-WP_311548166.1;Parent=gene-RM588_RS08895;Dbxref=GenBank:WP_311548166.1;Name=WP_311548166.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451536.1;locus_tag=RM588_RS08895;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_311548166.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	49578	50264	.	+	.	ID=gene-RM588_RS08900;Name=RM588_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08900;old_locus_tag=RM588_08895
NZ_JAVRJR010000006.1	Protein Homology	CDS	49578	50264	.	+	0	ID=cds-WP_037575988.1;Parent=gene-RM588_RS08900;Dbxref=GenBank:WP_037575988.1;Name=WP_037575988.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466413.1;locus_tag=RM588_RS08900;product=ABC transporter ATP-binding protein;protein_id=WP_037575988.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	50257	51444	.	+	.	ID=gene-RM588_RS08905;Name=RM588_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08905;old_locus_tag=RM588_08900
NZ_JAVRJR010000006.1	Protein Homology	CDS	50257	51444	.	+	0	ID=cds-WP_107366626.1;Parent=gene-RM588_RS08905;Dbxref=GenBank:WP_107366626.1;Name=WP_107366626.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729650.1;locus_tag=RM588_RS08905;product=ABC transporter permease;protein_id=WP_107366626.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	51834	52070	.	+	.	ID=gene-RM588_RS08910;Name=RM588_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08910;old_locus_tag=RM588_08905
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	51834	52070	.	+	0	ID=cds-WP_037575984.1;Parent=gene-RM588_RS08910;Dbxref=GenBank:WP_037575984.1;Name=WP_037575984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08910;product=hypothetical protein;protein_id=WP_037575984.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	52319	53527	.	+	.	ID=gene-RM588_RS08915;Name=RM588_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08915;old_locus_tag=RM588_08910
NZ_JAVRJR010000006.1	Protein Homology	CDS	52319	53527	.	+	0	ID=cds-WP_373368847.1;Parent=gene-RM588_RS08915;Dbxref=GenBank:WP_373368847.1;Name=WP_373368847.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467283.1;locus_tag=RM588_RS08915;product=serine hydrolase domain-containing protein;protein_id=WP_373368847.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	53683	53817	.	+	.	ID=gene-RM588_RS08920;Name=RM588_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08920;old_locus_tag=RM588_08915
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	53683	53817	.	+	0	ID=cds-WP_255201684.1;Parent=gene-RM588_RS08920;Dbxref=GenBank:WP_255201684.1;Name=WP_255201684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS08920;product=hypothetical protein;protein_id=WP_255201684.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	53844	54512	.	+	.	ID=gene-RM588_RS08925;Name=RM588_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08925;old_locus_tag=RM588_08920
NZ_JAVRJR010000006.1	Protein Homology	CDS	53844	54512	.	+	0	ID=cds-WP_037575983.1;Parent=gene-RM588_RS08925;Dbxref=GenBank:WP_037575983.1;Name=WP_037575983.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.7;locus_tag=RM588_RS08925;product=response regulator transcription factor;protein_id=WP_037575983.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	54509	55660	.	+	.	ID=gene-RM588_RS08930;Name=RM588_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08930;old_locus_tag=RM588_08925
NZ_JAVRJR010000006.1	Protein Homology	CDS	54509	55660	.	+	0	ID=cds-WP_311540450.1;Parent=gene-RM588_RS08930;Dbxref=GenBank:WP_311540450.1;Name=WP_311540450.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636325.1;locus_tag=RM588_RS08930;product=sensor histidine kinase;protein_id=WP_311540450.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	55729	56145	.	+	.	ID=gene-RM588_RS08935;Name=RM588_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08935;old_locus_tag=RM588_08930
NZ_JAVRJR010000006.1	Protein Homology	CDS	55729	56145	.	+	0	ID=cds-WP_037575979.1;Parent=gene-RM588_RS08935;Dbxref=GenBank:WP_037575979.1;Name=WP_037575979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931400.1;locus_tag=RM588_RS08935;product=DUF2231 domain-containing protein;protein_id=WP_037575979.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	56160	57095	.	+	.	ID=gene-RM588_RS08940;Name=RM588_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08940;old_locus_tag=RM588_08935
NZ_JAVRJR010000006.1	Protein Homology	CDS	56160	57095	.	+	0	ID=cds-WP_037575977.1;Parent=gene-RM588_RS08940;Dbxref=GenBank:WP_037575977.1;Name=WP_037575977.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219458.1;locus_tag=RM588_RS08940;product=cation diffusion facilitator family transporter;protein_id=WP_037575977.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	57206	57883	.	+	.	ID=gene-RM588_RS08945;Name=RM588_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08945;old_locus_tag=RM588_08940
NZ_JAVRJR010000006.1	Protein Homology	CDS	57206	57883	.	+	0	ID=cds-WP_037575975.1;Parent=gene-RM588_RS08945;Dbxref=GenBank:WP_037575975.1;Name=WP_037575975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019712443.1;locus_tag=RM588_RS08945;product=DUF554 domain-containing protein;protein_id=WP_037575975.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	58053	58991	.	-	.	ID=gene-RM588_RS08950;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=RM588_RS08950;old_locus_tag=RM588_08945
NZ_JAVRJR010000006.1	Protein Homology	CDS	58053	58991	.	-	0	ID=cds-WP_037575972.1;Parent=gene-RM588_RS08950;Dbxref=GenBank:WP_037575972.1;Name=WP_037575972.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426091.1;locus_tag=RM588_RS08950;product=urea transporter;protein_id=WP_037575972.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	59201	59503	.	+	.	ID=gene-RM588_RS08955;Name=RM588_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08955;old_locus_tag=RM588_08950
NZ_JAVRJR010000006.1	Protein Homology	CDS	59201	59503	.	+	0	ID=cds-WP_037575964.1;Parent=gene-RM588_RS08955;Dbxref=GenBank:WP_037575964.1;Name=WP_037575964.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=RM588_RS08955;product=urease subunit gamma;protein_id=WP_037575964.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	59515	59871	.	+	.	ID=gene-RM588_RS08960;Name=RM588_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08960;old_locus_tag=RM588_08955
NZ_JAVRJR010000006.1	Protein Homology	CDS	59515	59871	.	+	0	ID=cds-WP_037575963.1;Parent=gene-RM588_RS08960;Dbxref=GenBank:WP_037575963.1;Name=WP_037575963.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612953.1;locus_tag=RM588_RS08960;product=urease subunit beta;protein_id=WP_037575963.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	59868	61583	.	+	.	ID=gene-RM588_RS08965;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=RM588_RS08965;old_locus_tag=RM588_08960
NZ_JAVRJR010000006.1	Protein Homology	CDS	59868	61583	.	+	0	ID=cds-WP_311548160.1;Parent=gene-RM588_RS08965;Dbxref=GenBank:WP_311548160.1;Name=WP_311548160.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=RM588_RS08965;product=urease subunit alpha;protein_id=WP_311548160.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	61871	62416	.	+	.	ID=gene-RM588_RS08970;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=RM588_RS08970;old_locus_tag=RM588_08965
NZ_JAVRJR010000006.1	Protein Homology	CDS	61871	62416	.	+	0	ID=cds-WP_037575957.1;Parent=gene-RM588_RS08970;Dbxref=GenBank:WP_037575957.1;Name=WP_037575957.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612955.1;locus_tag=RM588_RS08970;product=dCTP deaminase;protein_id=WP_037575957.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	62416	63315	.	+	.	ID=gene-RM588_RS08975;Name=RM588_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08975;old_locus_tag=RM588_08970
NZ_JAVRJR010000006.1	Protein Homology	CDS	62416	63315	.	+	0	ID=cds-WP_037575949.1;Parent=gene-RM588_RS08975;Dbxref=GenBank:WP_037575949.1;Name=WP_037575949.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612956.1;locus_tag=RM588_RS08975;product=CobW family GTP-binding protein;protein_id=WP_037575949.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	63662	64084	.	+	.	ID=gene-RM588_RS08980;Name=RM588_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08980;old_locus_tag=RM588_08975
NZ_JAVRJR010000006.1	Protein Homology	CDS	63662	64084	.	+	0	ID=cds-WP_037575946.1;Parent=gene-RM588_RS08980;Dbxref=GenBank:WP_037575946.1;Name=WP_037575946.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612957.1;locus_tag=RM588_RS08980;product=universal stress protein;protein_id=WP_037575946.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	64282	65592	.	+	.	ID=gene-RM588_RS08985;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=RM588_RS08985;old_locus_tag=RM588_08980
NZ_JAVRJR010000006.1	Protein Homology	CDS	64282	65592	.	+	0	ID=cds-WP_103159505.1;Parent=gene-RM588_RS08985;Dbxref=GenBank:WP_103159505.1;Name=WP_103159505.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829028.1;locus_tag=RM588_RS08985;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_103159505.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	65634	65987	.	-	.	ID=gene-RM588_RS08990;Name=RM588_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08990;old_locus_tag=RM588_08985
NZ_JAVRJR010000006.1	Protein Homology	CDS	65634	65987	.	-	0	ID=cds-WP_103159504.1;Parent=gene-RM588_RS08990;Dbxref=GenBank:WP_103159504.1;Name=WP_103159504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482245.1;locus_tag=RM588_RS08990;product=DUF488 domain-containing protein;protein_id=WP_103159504.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	66178	66357	.	+	.	ID=gene-RM588_RS08995;Name=RM588_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS08995;old_locus_tag=RM588_08990
NZ_JAVRJR010000006.1	Protein Homology	CDS	66178	66357	.	+	0	ID=cds-WP_037575940.1;Parent=gene-RM588_RS08995;Dbxref=GenBank:WP_037575940.1;Name=WP_037575940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612966.1;locus_tag=RM588_RS08995;product=hypothetical protein;protein_id=WP_037575940.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	66824	67363	.	+	.	ID=gene-RM588_RS09000;Name=RM588_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09000;old_locus_tag=RM588_08995
NZ_JAVRJR010000006.1	Protein Homology	CDS	66824	67363	.	+	0	ID=cds-WP_037575938.1;Parent=gene-RM588_RS09000;Dbxref=GenBank:WP_037575938.1;Name=WP_037575938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF058244.1;locus_tag=RM588_RS09000;product=SA1002 family membrane protein;protein_id=WP_037575938.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	67505	68473	.	+	.	ID=gene-RM588_RS09005;Name=RM588_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09005;old_locus_tag=RM588_09000
NZ_JAVRJR010000006.1	Protein Homology	CDS	67505	68473	.	+	0	ID=cds-WP_037575933.1;Parent=gene-RM588_RS09005;Dbxref=GenBank:WP_037575933.1;Name=WP_037575933.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426110.1;locus_tag=RM588_RS09005;product=ABC transporter permease;protein_id=WP_037575933.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	68463	69422	.	+	.	ID=gene-RM588_RS09010;Name=RM588_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09010;old_locus_tag=RM588_09005
NZ_JAVRJR010000006.1	Protein Homology	CDS	68463	69422	.	+	0	ID=cds-WP_105963343.1;Parent=gene-RM588_RS09010;Dbxref=GenBank:WP_105963343.1;Name=WP_105963343.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426111.1;locus_tag=RM588_RS09010;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_105963343.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	69419	70222	.	+	.	ID=gene-RM588_RS09015;Name=RM588_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09015;old_locus_tag=RM588_09010
NZ_JAVRJR010000006.1	Protein Homology	CDS	69419	70222	.	+	0	ID=cds-WP_105963344.1;Parent=gene-RM588_RS09015;Dbxref=GenBank:WP_105963344.1;Name=WP_105963344.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449075.1;locus_tag=RM588_RS09015;product=iron ABC transporter ATP-binding protein;protein_id=WP_105963344.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	70238	71272	.	+	.	ID=gene-RM588_RS09020;Name=RM588_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09020;old_locus_tag=RM588_09015
NZ_JAVRJR010000006.1	Protein Homology	CDS	70238	71272	.	+	0	ID=cds-WP_107363984.1;Parent=gene-RM588_RS09020;Dbxref=GenBank:WP_107363984.1;Name=WP_107363984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426114.1;locus_tag=RM588_RS09020;product=ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD;protein_id=WP_107363984.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	71464	72660	.	-	.	ID=gene-RM588_RS09025;Name=lip;end_range=72660,.;gbkey=Gene;gene=lip;gene_biotype=pseudogene;locus_tag=RM588_RS09025;old_locus_tag=RM588_09020;partial=true;pseudo=true
NZ_JAVRJR010000006.1	Protein Homology	CDS	71464	72660	.	-	0	ID=cds-RM588_RS09025;Parent=gene-RM588_RS09025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005509,GO:0016298;end_range=72660,.;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364631.1;locus_tag=RM588_RS09025;partial=true;product=YSIRK-targeted triacylglycerol lipase;pseudo=true;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	73202	73633	.	-	.	ID=gene-RM588_RS09030;Name=RM588_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09030;old_locus_tag=RM588_09025
NZ_JAVRJR010000006.1	Protein Homology	CDS	73202	73633	.	-	0	ID=cds-WP_037575924.1;Parent=gene-RM588_RS09030;Dbxref=GenBank:WP_037575924.1;Name=WP_037575924.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289218.1;locus_tag=RM588_RS09030;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_037575924.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	73770	74390	.	+	.	ID=gene-RM588_RS09035;Name=RM588_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09035;old_locus_tag=RM588_09030
NZ_JAVRJR010000006.1	Protein Homology	CDS	73770	74390	.	+	0	ID=cds-WP_105996970.1;Parent=gene-RM588_RS09035;Dbxref=GenBank:WP_105996970.1;Name=WP_105996970.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449496.1;locus_tag=RM588_RS09035;product=nitroreductase family protein;protein_id=WP_105996970.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	74494	75207	.	+	.	ID=gene-RM588_RS09040;Name=RM588_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09040;old_locus_tag=RM588_09035
NZ_JAVRJR010000006.1	Protein Homology	CDS	74494	75207	.	+	0	ID=cds-WP_103159160.1;Parent=gene-RM588_RS09040;Dbxref=GenBank:WP_103159160.1;Name=WP_103159160.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016912759.1;locus_tag=RM588_RS09040;product=GTP pyrophosphokinase;protein_id=WP_103159160.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	75245	75805	.	-	.	ID=gene-RM588_RS09045;Name=RM588_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09045;old_locus_tag=RM588_09040
NZ_JAVRJR010000006.1	Protein Homology	CDS	75245	75805	.	-	0	ID=cds-WP_375713373.1;Parent=gene-RM588_RS09045;Dbxref=GenBank:WP_375713373.1;Name=WP_375713373.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723800.1;locus_tag=RM588_RS09045;product=M23 family metallopeptidase;protein_id=WP_375713373.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	76295	76693	.	-	.	ID=gene-RM588_RS09050;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=RM588_RS09050;old_locus_tag=RM588_09045
NZ_JAVRJR010000006.1	Protein Homology	CDS	76295	76693	.	-	0	ID=cds-WP_037575917.1;Parent=gene-RM588_RS09050;Dbxref=GenBank:WP_037575917.1;Name=WP_037575917.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM588_RS09050;product=arsenate reductase (thioredoxin);protein_id=WP_037575917.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	76711	78000	.	-	.	ID=gene-RM588_RS09055;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=RM588_RS09055;old_locus_tag=RM588_09050
NZ_JAVRJR010000006.1	Protein Homology	CDS	76711	78000	.	-	0	ID=cds-WP_311540457.1;Parent=gene-RM588_RS09055;Dbxref=GenBank:WP_311540457.1;Name=WP_311540457.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=RM588_RS09055;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_311540457.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	77997	78314	.	-	.	ID=gene-RM588_RS09060;Name=RM588_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09060;old_locus_tag=RM588_09055
NZ_JAVRJR010000006.1	Protein Homology	CDS	77997	78314	.	-	0	ID=cds-WP_311540458.1;Parent=gene-RM588_RS09060;Dbxref=GenBank:WP_311540458.1;Name=WP_311540458.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120606.1;locus_tag=RM588_RS09060;product=ArsR/SmtB family transcription factor;protein_id=WP_311540458.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	78375	78974	.	-	.	ID=gene-RM588_RS09065;Name=RM588_RS09065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS09065;old_locus_tag=RM588_09060;pseudo=true
NZ_JAVRJR010000006.1	Protein Homology	CDS	78375	78974	.	-	0	ID=cds-RM588_RS09065;Parent=gene-RM588_RS09065;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169163.1;locus_tag=RM588_RS09065;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	79108	79308	.	+	.	ID=gene-RM588_RS09070;Name=RM588_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09070;old_locus_tag=RM588_09065
NZ_JAVRJR010000006.1	Protein Homology	CDS	79108	79308	.	+	0	ID=cds-WP_107370550.1;Parent=gene-RM588_RS09070;Dbxref=GenBank:WP_107370550.1;Name=WP_107370550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477372.1;locus_tag=RM588_RS09070;product=hypothetical protein;protein_id=WP_107370550.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	79341	79661	.	+	.	ID=gene-RM588_RS09075;Name=RM588_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09075;old_locus_tag=RM588_09070
NZ_JAVRJR010000006.1	Protein Homology	CDS	79341	79661	.	+	0	ID=cds-WP_107370549.1;Parent=gene-RM588_RS09075;Dbxref=GenBank:WP_107370549.1;Name=WP_107370549.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449352.1;locus_tag=RM588_RS09075;product=ArsR/SmtB family transcription factor;protein_id=WP_107370549.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	79748	80632	.	+	.	ID=gene-RM588_RS09080;Name=RM588_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09080;old_locus_tag=RM588_09075
NZ_JAVRJR010000006.1	Protein Homology	CDS	79748	80632	.	+	0	ID=cds-WP_311548161.1;Parent=gene-RM588_RS09080;Dbxref=GenBank:WP_311548161.1;Name=WP_311548161.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911212.1;locus_tag=RM588_RS09080;product=permease;protein_id=WP_311548161.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	80652	81700	.	+	.	ID=gene-RM588_RS09085;Name=RM588_RS09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS09085;old_locus_tag=RM588_09080;pseudo=true
NZ_JAVRJR010000006.1	Protein Homology	CDS	80652	81700	.	+	0	ID=cds-RM588_RS09085;Parent=gene-RM588_RS09085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362755.1;locus_tag=RM588_RS09085;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	81725	81868	.	+	.	ID=gene-RM588_RS09090;Name=RM588_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09090;old_locus_tag=RM588_09085
NZ_JAVRJR010000006.1	Protein Homology	CDS	81725	81868	.	+	0	ID=cds-WP_107370552.1;Parent=gene-RM588_RS09090;Dbxref=GenBank:WP_107370552.1;Name=WP_107370552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020008108.1;locus_tag=RM588_RS09090;product=hypothetical protein;protein_id=WP_107370552.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	81937	82251	.	+	.	ID=gene-RM588_RS09095;Name=RM588_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09095;old_locus_tag=RM588_09090
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	81937	82251	.	+	0	ID=cds-WP_311540460.1;Parent=gene-RM588_RS09095;Dbxref=GenBank:WP_311540460.1;Name=WP_311540460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09095;product=helix-turn-helix domain-containing protein;protein_id=WP_311540460.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	82290	82508	.	+	.	ID=gene-RM588_RS09100;Name=RM588_RS09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS09100;old_locus_tag=RM588_09095;partial=true;pseudo=true;start_range=.,82290
NZ_JAVRJR010000006.1	Protein Homology	CDS	82290	82508	.	+	0	ID=cds-RM588_RS09100;Parent=gene-RM588_RS09100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM588_RS09100;partial=true;product=arsenate reductase/protein-tyrosine-phosphatase family protein;pseudo=true;start_range=.,82290;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	82699	83559	.	-	.	ID=gene-RM588_RS09105;Name=RM588_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09105;old_locus_tag=RM588_09100
NZ_JAVRJR010000006.1	Protein Homology	CDS	82699	83559	.	-	0	ID=cds-WP_037575911.1;Parent=gene-RM588_RS09105;Dbxref=GenBank:WP_037575911.1;Name=WP_037575911.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725232.1;locus_tag=RM588_RS09105;product=CHAP domain-containing protein;protein_id=WP_037575911.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	84219	84914	.	-	.	ID=gene-RM588_RS09110;Name=RM588_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09110;old_locus_tag=RM588_09105
NZ_JAVRJR010000006.1	Protein Homology	CDS	84219	84914	.	-	0	ID=cds-WP_105963346.1;Parent=gene-RM588_RS09110;Dbxref=GenBank:WP_105963346.1;Name=WP_105963346.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499548.1;locus_tag=RM588_RS09110;product=transglycosylase family protein;protein_id=WP_105963346.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	85336	86754	.	+	.	ID=gene-RM588_RS09115;Name=RM588_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09115;old_locus_tag=RM588_09110
NZ_JAVRJR010000006.1	Protein Homology	CDS	85336	86754	.	+	0	ID=cds-WP_311548162.1;Parent=gene-RM588_RS09115;Dbxref=GenBank:WP_311548162.1;Name=WP_311548162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=RM588_RS09115;product=phosphate--AMP phosphotransferase;protein_id=WP_311548162.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	86866	87747	.	+	.	ID=gene-RM588_RS09120;Name=RM588_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09120;old_locus_tag=RM588_09115
NZ_JAVRJR010000006.1	Protein Homology	CDS	86866	87747	.	+	0	ID=cds-WP_037575900.1;Parent=gene-RM588_RS09120;Dbxref=GenBank:WP_037575900.1;Name=WP_037575900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164951.1;locus_tag=RM588_RS09120;product=alpha/beta fold hydrolase;protein_id=WP_037575900.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	87806	88441	.	+	.	ID=gene-RM588_RS09125;Name=RM588_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09125;old_locus_tag=RM588_09120
NZ_JAVRJR010000006.1	Protein Homology	CDS	87806	88441	.	+	0	ID=cds-WP_037575898.1;Parent=gene-RM588_RS09125;Dbxref=GenBank:WP_037575898.1;Name=WP_037575898.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF016115.7;locus_tag=RM588_RS09125;product=cyclase family protein;protein_id=WP_037575898.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	88483	89697	.	+	.	ID=gene-RM588_RS09130;Name=RM588_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09130;old_locus_tag=RM588_09125
NZ_JAVRJR010000006.1	Protein Homology	CDS	88483	89697	.	+	0	ID=cds-WP_105963350.1;Parent=gene-RM588_RS09130;Dbxref=GenBank:WP_105963350.1;Name=WP_105963350.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510051.1;locus_tag=RM588_RS09130;product=Bcr/CflA family efflux MFS transporter;protein_id=WP_105963350.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	89778	89984	.	-	.	ID=gene-RM588_RS09135;Name=RM588_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09135;old_locus_tag=RM588_09130
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	89778	89984	.	-	0	ID=cds-WP_037575894.1;Parent=gene-RM588_RS09135;Dbxref=GenBank:WP_037575894.1;Name=WP_037575894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09135;product=hypothetical protein;protein_id=WP_037575894.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	90218	95212	.	+	.	ID=gene-RM588_RS09140;Name=RM588_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09140;old_locus_tag=RM588_09135
NZ_JAVRJR010000006.1	Protein Homology	CDS	90218	95212	.	+	0	ID=cds-WP_311548163.1;Parent=gene-RM588_RS09140;Dbxref=GenBank:WP_311548163.1;Name=WP_311548163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.7;locus_tag=RM588_RS09140;product=Ig-like domain-containing protein;protein_id=WP_311548163.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	95417	96283	.	-	.	ID=gene-RM588_RS09145;Name=RM588_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09145;old_locus_tag=RM588_09140
NZ_JAVRJR010000006.1	Protein Homology	CDS	95417	96283	.	-	0	ID=cds-WP_103159554.1;Parent=gene-RM588_RS09145;Dbxref=GenBank:WP_103159554.1;Name=WP_103159554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465127.1;locus_tag=RM588_RS09145;product=SDR family oxidoreductase;protein_id=WP_103159554.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	96304	98304	.	-	.	ID=gene-RM588_RS09150;Name=RM588_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09150;old_locus_tag=RM588_09145
NZ_JAVRJR010000006.1	Protein Homology	CDS	96304	98304	.	-	0	ID=cds-WP_105963352.1;Parent=gene-RM588_RS09150;Dbxref=GenBank:WP_105963352.1;Name=WP_105963352.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469893.1;locus_tag=RM588_RS09150;product=catalase;protein_id=WP_105963352.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	98560	99684	.	+	.	ID=gene-RM588_RS09155;Name=RM588_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09155;old_locus_tag=RM588_09150
NZ_JAVRJR010000006.1	Protein Homology	CDS	98560	99684	.	+	0	ID=cds-WP_037575886.1;Parent=gene-RM588_RS09155;Dbxref=GenBank:WP_037575886.1;Name=WP_037575886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729631.1;locus_tag=RM588_RS09155;product=hypothetical protein;protein_id=WP_037575886.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	99911	101053	.	+	.	ID=gene-RM588_RS09160;Name=RM588_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09160;old_locus_tag=RM588_09155
NZ_JAVRJR010000006.1	Protein Homology	CDS	99911	101053	.	+	0	ID=cds-WP_103159556.1;Parent=gene-RM588_RS09160;Dbxref=GenBank:WP_103159556.1;Name=WP_103159556.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006983.1;locus_tag=RM588_RS09160;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_103159556.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	101147	101902	.	-	.	ID=gene-RM588_RS09165;Name=RM588_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09165;old_locus_tag=RM588_09160
NZ_JAVRJR010000006.1	Protein Homology	CDS	101147	101902	.	-	0	ID=cds-WP_119505392.1;Parent=gene-RM588_RS09165;Dbxref=GenBank:WP_119505392.1;Name=WP_119505392.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164954.1;locus_tag=RM588_RS09165;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_119505392.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	102055	103824	.	+	.	ID=gene-RM588_RS09170;Name=RM588_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09170;old_locus_tag=RM588_09165
NZ_JAVRJR010000006.1	Protein Homology	CDS	102055	103824	.	+	0	ID=cds-WP_311540465.1;Parent=gene-RM588_RS09170;Dbxref=GenBank:WP_311540465.1;Name=WP_311540465.1;Ontology_term=GO:0005996,GO:0042355,GO:0008736,GO:0030145;gbkey=CDS;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=monosaccharide metabolic process|0005996||IEA,L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164955.1;locus_tag=RM588_RS09170;product=L-fucose isomerase;protein_id=WP_311540465.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	103840	105234	.	+	.	ID=gene-RM588_RS09175;Name=RM588_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09175;old_locus_tag=RM588_09170
NZ_JAVRJR010000006.1	Protein Homology	CDS	103840	105234	.	+	0	ID=cds-WP_311540466.1;Parent=gene-RM588_RS09175;Dbxref=GenBank:WP_311540466.1;Name=WP_311540466.1;Ontology_term=GO:0006071,GO:0019301,GO:0004370,GO:0005524,GO:0008993;gbkey=CDS;go_function=glycerol kinase activity|0004370||IEA,ATP binding|0005524||IEA,rhamnulokinase activity|0008993||IEA;go_process=glycerol metabolic process|0006071||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164956.1;locus_tag=RM588_RS09175;product=rhamnulokinase;protein_id=WP_311540466.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	105246	106571	.	+	.	ID=gene-RM588_RS09180;Name=RM588_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09180;old_locus_tag=RM588_09175
NZ_JAVRJR010000006.1	Protein Homology	CDS	105246	106571	.	+	0	ID=cds-WP_105987013.1;Parent=gene-RM588_RS09180;Dbxref=GenBank:WP_105987013.1;Name=WP_105987013.1;Ontology_term=GO:0008643,GO:0051119,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: protein motif:HMM:TIGR00879.1;locus_tag=RM588_RS09180;product=sugar porter family MFS transporter;protein_id=WP_105987013.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	106583	107233	.	+	.	ID=gene-RM588_RS09185;Name=RM588_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09185;old_locus_tag=RM588_09180
NZ_JAVRJR010000006.1	Protein Homology	CDS	106583	107233	.	+	0	ID=cds-WP_119505389.1;Parent=gene-RM588_RS09185;Dbxref=GenBank:WP_119505389.1;Name=WP_119505389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019911723.1;locus_tag=RM588_RS09185;product=class II aldolase/adducin family protein;protein_id=WP_119505389.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	107241	107663	.	+	.	ID=gene-RM588_RS09190;Name=RM588_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09190;old_locus_tag=RM588_09185
NZ_JAVRJR010000006.1	Protein Homology	CDS	107241	107663	.	+	0	ID=cds-WP_107359089.1;Parent=gene-RM588_RS09190;Dbxref=GenBank:WP_107359089.1;Name=WP_107359089.1;Ontology_term=GO:0016853,GO:0048029;gbkey=CDS;go_function=isomerase activity|0016853||IEA,monosaccharide binding|0048029||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018758007.1;locus_tag=RM588_RS09190;product=RbsD/FucU family protein;protein_id=WP_107359089.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	107679	109115	.	+	.	ID=gene-RM588_RS09195;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=RM588_RS09195;old_locus_tag=RM588_09190
NZ_JAVRJR010000006.1	Protein Homology	CDS	107679	109115	.	+	0	ID=cds-WP_119505388.1;Parent=gene-RM588_RS09195;Dbxref=GenBank:WP_119505388.1;Name=WP_119505388.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019164960.1;locus_tag=RM588_RS09195;product=aldehyde dehydrogenase;protein_id=WP_119505388.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	109166	109342	.	-	.	ID=gene-RM588_RS09200;Name=RM588_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09200;old_locus_tag=RM588_09195
NZ_JAVRJR010000006.1	Protein Homology	CDS	109166	109342	.	-	0	ID=cds-WP_311540467.1;Parent=gene-RM588_RS09200;Dbxref=GenBank:WP_311540467.1;Name=WP_311540467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM588_RS09200;product=VraH family protein;protein_id=WP_311540467.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	109540	109740	.	-	.	ID=gene-RM588_RS09205;Name=RM588_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09205;old_locus_tag=RM588_09200
NZ_JAVRJR010000006.1	Protein Homology	CDS	109540	109740	.	-	0	ID=cds-WP_037575879.1;Parent=gene-RM588_RS09205;Dbxref=GenBank:WP_037575879.1;Name=WP_037575879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055421.1;locus_tag=RM588_RS09205;product=VraH family peptide resistance protein;protein_id=WP_037575879.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	109869	110753	.	+	.	ID=gene-RM588_RS09210;Name=RM588_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09210;old_locus_tag=RM588_09205
NZ_JAVRJR010000006.1	Protein Homology	CDS	109869	110753	.	+	0	ID=cds-WP_105996977.1;Parent=gene-RM588_RS09210;Dbxref=GenBank:WP_105996977.1;Name=WP_105996977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010990549.1;locus_tag=RM588_RS09210;product=SDR family oxidoreductase;protein_id=WP_105996977.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	110988	112442	.	+	.	ID=gene-RM588_RS09215;Name=RM588_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09215;old_locus_tag=RM588_09210
NZ_JAVRJR010000006.1	GeneMarkS-2+	CDS	110988	112442	.	+	0	ID=cds-WP_311548164.1;Parent=gene-RM588_RS09215;Dbxref=GenBank:WP_311548164.1;Name=WP_311548164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09215;product=hypothetical protein;protein_id=WP_311548164.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	pseudogene	112476	112625	.	+	.	ID=gene-RM588_RS09220;Name=RM588_RS09220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS09220;old_locus_tag=RM588_09215;partial=true;pseudo=true;start_range=.,112476
NZ_JAVRJR010000006.1	Protein Homology	CDS	112476	112625	.	+	0	ID=cds-RM588_RS09220;Parent=gene-RM588_RS09220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825102.1;locus_tag=RM588_RS09220;partial=true;product=sugar transferase;pseudo=true;start_range=.,112476;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	112625	113482	.	+	.	ID=gene-RM588_RS09225;Name=RM588_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09225;old_locus_tag=RM588_09220
NZ_JAVRJR010000006.1	Protein Homology	CDS	112625	113482	.	+	0	ID=cds-WP_311540469.1;Parent=gene-RM588_RS09225;Dbxref=GenBank:WP_311540469.1;Name=WP_311540469.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF016228.7;locus_tag=RM588_RS09225;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_311540469.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	113600	114751	.	+	.	ID=gene-RM588_RS09230;Name=RM588_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09230;old_locus_tag=RM588_09225
NZ_JAVRJR010000006.1	Protein Homology	CDS	113600	114751	.	+	0	ID=cds-WP_311548165.1;Parent=gene-RM588_RS09230;Dbxref=GenBank:WP_311548165.1;Name=WP_311548165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455551.1;locus_tag=RM588_RS09230;product=FAD/NAD(P)-binding protein;protein_id=WP_311548165.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	114821	115204	.	+	.	ID=gene-RM588_RS09235;Name=RM588_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09235;old_locus_tag=RM588_09230
NZ_JAVRJR010000006.1	Protein Homology	CDS	114821	115204	.	+	0	ID=cds-WP_107366877.1;Parent=gene-RM588_RS09235;Dbxref=GenBank:WP_107366877.1;Name=WP_107366877.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426132.1;locus_tag=RM588_RS09235;product=NUDIX hydrolase;protein_id=WP_107366877.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	115246	115647	.	-	.	ID=gene-RM588_RS09240;Name=RM588_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09240;old_locus_tag=RM588_09235
NZ_JAVRJR010000006.1	Protein Homology	CDS	115246	115647	.	-	0	ID=cds-WP_233650143.1;Parent=gene-RM588_RS09240;Dbxref=GenBank:WP_233650143.1;Name=WP_233650143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612980.1;locus_tag=RM588_RS09240;product=hypothetical protein;protein_id=WP_233650143.1;transl_table=11
NZ_JAVRJR010000006.1	RefSeq	gene	116263	116687	.	+	.	ID=gene-RM588_RS09245;Name=RM588_RS09245;end_range=116687,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09245;old_locus_tag=RM588_09240;partial=true
NZ_JAVRJR010000006.1	Protein Homology	CDS	116263	116687	.	+	0	ID=cds-WP_311540473.1;Parent=gene-RM588_RS09245;Dbxref=GenBank:WP_311540473.1;Name=WP_311540473.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;end_range=116687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729677.1;locus_tag=RM588_RS09245;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=WP_311540473.1;transl_table=11
##sequence-region NZ_JAVRJR010000007.1 1 85034
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000007.1	RefSeq	region	1	85034	.	+	.	ID=NZ_JAVRJR010000007.1:1..85034;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000007.1	RefSeq	gene	3	76	.	-	.	ID=gene-RM588_RS09250;Name=RM588_RS09250;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS09250;old_locus_tag=RM588_09245
NZ_JAVRJR010000007.1	tRNAscan-SE	tRNA	3	76	.	-	.	ID=rna-RM588_RS09250;Parent=gene-RM588_RS09250;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09250;product=tRNA-Gly
NZ_JAVRJR010000007.1	tRNAscan-SE	exon	3	76	.	-	.	ID=exon-RM588_RS09250-1;Parent=rna-RM588_RS09250;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09250;product=tRNA-Gly
NZ_JAVRJR010000007.1	RefSeq	gene	99	181	.	-	.	ID=gene-RM588_RS09255;Name=RM588_RS09255;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS09255;old_locus_tag=RM588_09250
NZ_JAVRJR010000007.1	tRNAscan-SE	tRNA	99	181	.	-	.	ID=rna-RM588_RS09255;Parent=gene-RM588_RS09255;anticodon=(pos:complement(146..148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09255;product=tRNA-Leu
NZ_JAVRJR010000007.1	tRNAscan-SE	exon	99	181	.	-	.	ID=exon-RM588_RS09255-1;Parent=rna-RM588_RS09255;anticodon=(pos:complement(146..148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09255;product=tRNA-Leu
NZ_JAVRJR010000007.1	RefSeq	gene	631	1086	.	-	.	ID=gene-RM588_RS09260;Name=RM588_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09260;old_locus_tag=RM588_09255
NZ_JAVRJR010000007.1	Protein Homology	CDS	631	1086	.	-	0	ID=cds-WP_107372196.1;Parent=gene-RM588_RS09260;Dbxref=GenBank:WP_107372196.1;Name=WP_107372196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058114.1;locus_tag=RM588_RS09260;product=SprT family protein;protein_id=WP_107372196.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	1079	3229	.	-	.	ID=gene-RM588_RS09265;Name=RM588_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09265;old_locus_tag=RM588_09260
NZ_JAVRJR010000007.1	Protein Homology	CDS	1079	3229	.	-	0	ID=cds-WP_105997016.1;Parent=gene-RM588_RS09265;Dbxref=GenBank:WP_105997016.1;Name=WP_105997016.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236007.1;locus_tag=RM588_RS09265;product=Tex family protein;protein_id=WP_105997016.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	3384	4154	.	-	.	ID=gene-RM588_RS09270;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=RM588_RS09270;old_locus_tag=RM588_09265
NZ_JAVRJR010000007.1	Protein Homology	CDS	3384	4154	.	-	0	ID=cds-WP_037577167.1;Parent=gene-RM588_RS09270;Dbxref=GenBank:WP_037577167.1;Name=WP_037577167.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505950.1;locus_tag=RM588_RS09270;product=RNA polymerase sigma factor SigB;protein_id=WP_037577167.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	4129	4608	.	-	.	ID=gene-RM588_RS09275;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=RM588_RS09275;old_locus_tag=RM588_09270
NZ_JAVRJR010000007.1	Protein Homology	CDS	4129	4608	.	-	0	ID=cds-WP_037577169.1;Parent=gene-RM588_RS09275;Dbxref=GenBank:WP_037577169.1;Name=WP_037577169.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426491.1;locus_tag=RM588_RS09275;product=anti-sigma B factor RsbW;protein_id=WP_037577169.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	4611	4937	.	-	.	ID=gene-RM588_RS09280;Name=RM588_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09280;old_locus_tag=RM588_09275
NZ_JAVRJR010000007.1	Protein Homology	CDS	4611	4937	.	-	0	ID=cds-WP_037577172.1;Parent=gene-RM588_RS09280;Dbxref=GenBank:WP_037577172.1;Name=WP_037577172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=RM588_RS09280;product=anti-sigma factor antagonist;protein_id=WP_037577172.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	5018	6022	.	-	.	ID=gene-RM588_RS09285;Name=RM588_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09285;old_locus_tag=RM588_09280
NZ_JAVRJR010000007.1	Protein Homology	CDS	5018	6022	.	-	0	ID=cds-WP_037577174.1;Parent=gene-RM588_RS09285;Dbxref=GenBank:WP_037577174.1;Name=WP_037577174.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825730.1;locus_tag=RM588_RS09285;product=SpoIIE family protein phosphatase;protein_id=WP_037577174.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	6086	6439	.	-	.	ID=gene-RM588_RS09290;Name=RM588_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09290;old_locus_tag=RM588_09285
NZ_JAVRJR010000007.1	Protein Homology	CDS	6086	6439	.	-	0	ID=cds-WP_103159488.1;Parent=gene-RM588_RS09290;Dbxref=GenBank:WP_103159488.1;Name=WP_103159488.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169266.1;locus_tag=RM588_RS09290;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_103159488.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	6440	6610	.	-	.	ID=gene-RM588_RS09295;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=RM588_RS09295;old_locus_tag=RM588_09290
NZ_JAVRJR010000007.1	Protein Homology	CDS	6440	6610	.	-	0	ID=cds-WP_037577177.1;Parent=gene-RM588_RS09295;Dbxref=GenBank:WP_037577177.1;Name=WP_037577177.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mazE;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169265.1;locus_tag=RM588_RS09295;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_037577177.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	6695	7843	.	-	.	ID=gene-RM588_RS09300;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM588_RS09300;old_locus_tag=RM588_09295
NZ_JAVRJR010000007.1	Protein Homology	CDS	6695	7843	.	-	0	ID=cds-WP_037577179.1;Parent=gene-RM588_RS09300;Dbxref=GenBank:WP_037577179.1;Name=WP_037577179.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281145.1;locus_tag=RM588_RS09300;product=alanine racemase;protein_id=WP_037577179.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	7959	8309	.	-	.	ID=gene-RM588_RS09305;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=RM588_RS09305;old_locus_tag=RM588_09300
NZ_JAVRJR010000007.1	Protein Homology	CDS	7959	8309	.	-	0	ID=cds-WP_037577181.1;Parent=gene-RM588_RS09305;Dbxref=GenBank:WP_037577181.1;Name=WP_037577181.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509014.1;locus_tag=RM588_RS09305;product=holo-ACP synthase;protein_id=WP_037577181.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	8306	8821	.	-	.	ID=gene-RM588_RS09310;Name=RM588_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09310;old_locus_tag=RM588_09305
NZ_JAVRJR010000007.1	Protein Homology	CDS	8306	8821	.	-	0	ID=cds-WP_051605021.1;Parent=gene-RM588_RS09310;Dbxref=GenBank:WP_051605021.1;Name=WP_051605021.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM588_RS09310;product=PH domain-containing protein;protein_id=WP_051605021.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	8818	10296	.	-	.	ID=gene-RM588_RS09315;Name=RM588_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09315;old_locus_tag=RM588_09310
NZ_JAVRJR010000007.1	Protein Homology	CDS	8818	10296	.	-	0	ID=cds-WP_037577183.1;Parent=gene-RM588_RS09315;Dbxref=GenBank:WP_037577183.1;Name=WP_037577183.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169261.1;locus_tag=RM588_RS09315;product=PH domain-containing protein;protein_id=WP_037577183.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	10289	10762	.	-	.	ID=gene-RM588_RS09320;Name=RM588_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09320;old_locus_tag=RM588_09315
NZ_JAVRJR010000007.1	Protein Homology	CDS	10289	10762	.	-	0	ID=cds-WP_107370464.1;Parent=gene-RM588_RS09320;Dbxref=GenBank:WP_107370464.1;Name=WP_107370464.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015648.8;locus_tag=RM588_RS09320;product=PH domain-containing protein;protein_id=WP_107370464.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	11022	12506	.	-	.	ID=gene-RM588_RS09325;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=RM588_RS09325;old_locus_tag=RM588_09320
NZ_JAVRJR010000007.1	Protein Homology	CDS	11022	12506	.	-	0	ID=cds-WP_103159486.1;Parent=gene-RM588_RS09325;Dbxref=GenBank:WP_103159486.1;Name=WP_103159486.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466787.1;locus_tag=RM588_RS09325;product=degradosome RNA helicase CshA;protein_id=WP_103159486.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	12950	14314	.	-	.	ID=gene-RM588_RS09330;Name=RM588_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09330;old_locus_tag=RM588_09325
NZ_JAVRJR010000007.1	Protein Homology	CDS	12950	14314	.	-	0	ID=cds-WP_107367163.1;Parent=gene-RM588_RS09330;Dbxref=GenBank:WP_107367163.1;Name=WP_107367163.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481758.1;locus_tag=RM588_RS09330;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_107367163.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	14323	15396	.	-	.	ID=gene-RM588_RS09335;Name=RM588_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09335;old_locus_tag=RM588_09330
NZ_JAVRJR010000007.1	Protein Homology	CDS	14323	15396	.	-	0	ID=cds-WP_037577189.1;Parent=gene-RM588_RS09335;Dbxref=GenBank:WP_037577189.1;Name=WP_037577189.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=RM588_RS09335;product=D-alanine--D-alanine ligase;protein_id=WP_037577189.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	15558	16769	.	+	.	ID=gene-RM588_RS09340;Name=RM588_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09340;old_locus_tag=RM588_09335
NZ_JAVRJR010000007.1	Protein Homology	CDS	15558	16769	.	+	0	ID=cds-WP_037577191.1;Parent=gene-RM588_RS09340;Dbxref=GenBank:WP_037577191.1;Name=WP_037577191.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169256.1;locus_tag=RM588_RS09340;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_037577191.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	16943	17083	.	-	.	ID=gene-RM588_RS09345;Name=RM588_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09345;old_locus_tag=RM588_09340
NZ_JAVRJR010000007.1	Protein Homology	CDS	16943	17083	.	-	0	ID=cds-WP_086375151.1;Parent=gene-RM588_RS09345;Dbxref=GenBank:WP_086375151.1;Name=WP_086375151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507098.1;locus_tag=RM588_RS09345;product=Lmo0850 family protein;protein_id=WP_086375151.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	17170	19350	.	-	.	ID=gene-RM588_RS09350;Name=RM588_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09350;old_locus_tag=RM588_09345
NZ_JAVRJR010000007.1	Protein Homology	CDS	17170	19350	.	-	0	ID=cds-WP_233655164.1;Parent=gene-RM588_RS09350;Dbxref=GenBank:WP_233655164.1;Name=WP_233655164.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426477.1;locus_tag=RM588_RS09350;product=heavy metal translocating P-type ATPase;protein_id=WP_233655164.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	19490	19693	.	-	.	ID=gene-RM588_RS09355;Name=RM588_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09355;old_locus_tag=RM588_09350
NZ_JAVRJR010000007.1	Protein Homology	CDS	19490	19693	.	-	0	ID=cds-WP_103159259.1;Parent=gene-RM588_RS09355;Dbxref=GenBank:WP_103159259.1;Name=WP_103159259.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169317.1;locus_tag=RM588_RS09355;product=heavy-metal-associated domain-containing protein;protein_id=WP_103159259.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	19695	19919	.	-	.	ID=gene-RM588_RS09360;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=RM588_RS09360;old_locus_tag=RM588_09355
NZ_JAVRJR010000007.1	Protein Homology	CDS	19695	19919	.	-	0	ID=cds-WP_037577197.1;Parent=gene-RM588_RS09360;Dbxref=GenBank:WP_037577197.1;Name=WP_037577197.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426475.1;locus_tag=RM588_RS09360;product=putative copper chaperone CsoZ;protein_id=WP_037577197.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	19932	20219	.	-	.	ID=gene-RM588_RS09365;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=RM588_RS09365;old_locus_tag=RM588_09360
NZ_JAVRJR010000007.1	Protein Homology	CDS	19932	20219	.	-	0	ID=cds-WP_037577199.1;Parent=gene-RM588_RS09365;Dbxref=GenBank:WP_037577199.1;Name=WP_037577199.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169315.1;locus_tag=RM588_RS09365;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_037577199.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	20355	21845	.	+	.	ID=gene-RM588_RS09370;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM588_RS09370;old_locus_tag=RM588_09365
NZ_JAVRJR010000007.1	Protein Homology	CDS	20355	21845	.	+	0	ID=cds-WP_037577201.1;Parent=gene-RM588_RS09370;Dbxref=GenBank:WP_037577201.1;Name=WP_037577201.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455067.1;locus_tag=RM588_RS09370;product=cardiolipin synthase;protein_id=WP_037577201.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	21893	22483	.	+	.	ID=gene-RM588_RS09375;Name=RM588_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09375;old_locus_tag=RM588_09370
NZ_JAVRJR010000007.1	Protein Homology	CDS	21893	22483	.	+	0	ID=cds-WP_375713375.1;Parent=gene-RM588_RS09375;Dbxref=GenBank:WP_375713375.1;Name=WP_375713375.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187612.1;locus_tag=RM588_RS09375;product=HD domain-containing protein;protein_id=WP_375713375.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	22535	23401	.	-	.	ID=gene-RM588_RS09380;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM588_RS09380;old_locus_tag=RM588_09375
NZ_JAVRJR010000007.1	Protein Homology	CDS	22535	23401	.	-	0	ID=cds-WP_103159256.1;Parent=gene-RM588_RS09380;Dbxref=GenBank:WP_103159256.1;Name=WP_103159256.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500806.1;locus_tag=RM588_RS09380;product=membrane protein insertase YidC;protein_id=WP_103159256.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	23490	24128	.	-	.	ID=gene-RM588_RS09385;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=RM588_RS09385;old_locus_tag=RM588_09380
NZ_JAVRJR010000007.1	Protein Homology	CDS	23490	24128	.	-	0	ID=cds-WP_103159255.1;Parent=gene-RM588_RS09385;Dbxref=GenBank:WP_103159255.1;Name=WP_103159255.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165814.1;locus_tag=RM588_RS09385;product=thiamine phosphate synthase;protein_id=WP_103159255.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	24133	24921	.	-	.	ID=gene-RM588_RS09390;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=RM588_RS09390;old_locus_tag=RM588_09385
NZ_JAVRJR010000007.1	Protein Homology	CDS	24133	24921	.	-	0	ID=cds-WP_037577207.1;Parent=gene-RM588_RS09390;Dbxref=GenBank:WP_037577207.1;Name=WP_037577207.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175143.1;locus_tag=RM588_RS09390;product=hydroxyethylthiazole kinase;protein_id=WP_037577207.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	24923	25729	.	-	.	ID=gene-RM588_RS09395;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM588_RS09395;old_locus_tag=RM588_09390
NZ_JAVRJR010000007.1	Protein Homology	CDS	24923	25729	.	-	0	ID=cds-WP_037577208.1;Parent=gene-RM588_RS09395;Dbxref=GenBank:WP_037577208.1;Name=WP_037577208.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426465.1;locus_tag=RM588_RS09395;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_037577208.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	25731	26411	.	-	.	ID=gene-RM588_RS09400;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=RM588_RS09400;old_locus_tag=RM588_09395
NZ_JAVRJR010000007.1	Protein Homology	CDS	25731	26411	.	-	0	ID=cds-WP_107370460.1;Parent=gene-RM588_RS09400;Dbxref=GenBank:WP_107370460.1;Name=WP_107370460.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999712.1;locus_tag=RM588_RS09400;product=thiaminase II;protein_id=WP_107370460.1;transl_table=11
NZ_JAVRJR010000007.1	cmsearch	riboswitch	26475	26574	.	-	.	ID=id-NZ_JAVRJR010000007.1:26475..26574;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000007.1	RefSeq	gene	26701	27507	.	-	.	ID=gene-RM588_RS09405;Name=RM588_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09405;old_locus_tag=RM588_09400
NZ_JAVRJR010000007.1	Protein Homology	CDS	26701	27507	.	-	0	ID=cds-WP_037577212.1;Parent=gene-RM588_RS09405;Dbxref=GenBank:WP_037577212.1;Name=WP_037577212.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383914.1;locus_tag=RM588_RS09405;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_037577212.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	27978	28295	.	-	.	ID=gene-RM588_RS09410;Name=RM588_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09410;old_locus_tag=RM588_09405
NZ_JAVRJR010000007.1	Protein Homology	CDS	27978	28295	.	-	0	ID=cds-WP_311541452.1;Parent=gene-RM588_RS09410;Dbxref=GenBank:WP_311541452.1;Name=WP_311541452.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426463.1;locus_tag=RM588_RS09410;product=single-stranded DNA-binding protein;protein_id=WP_311541452.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	28485	28925	.	+	.	ID=gene-RM588_RS09415;Name=RM588_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09415;old_locus_tag=RM588_09410
NZ_JAVRJR010000007.1	Protein Homology	CDS	28485	28925	.	+	0	ID=cds-WP_037577213.1;Parent=gene-RM588_RS09415;Dbxref=GenBank:WP_037577213.1;Name=WP_037577213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722099.1;locus_tag=RM588_RS09415;product=YwpF-like family protein;protein_id=WP_037577213.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	28957	29397	.	-	.	ID=gene-RM588_RS09420;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=RM588_RS09420;old_locus_tag=RM588_09415
NZ_JAVRJR010000007.1	Protein Homology	CDS	28957	29397	.	-	0	ID=cds-WP_037576630.1;Parent=gene-RM588_RS09420;Dbxref=GenBank:WP_037576630.1;Name=WP_037576630.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471640.1;locus_tag=RM588_RS09420;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_037576630.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	29397	29600	.	-	.	ID=gene-RM588_RS09425;Name=RM588_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09425;old_locus_tag=RM588_09420
NZ_JAVRJR010000007.1	Protein Homology	CDS	29397	29600	.	-	0	ID=cds-WP_103159248.1;Parent=gene-RM588_RS09425;Dbxref=GenBank:WP_103159248.1;Name=WP_103159248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220231.1;locus_tag=RM588_RS09425;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_103159248.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	29587	30858	.	-	.	ID=gene-RM588_RS09430;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=RM588_RS09430;old_locus_tag=RM588_09425
NZ_JAVRJR010000007.1	Protein Homology	CDS	29587	30858	.	-	0	ID=cds-WP_105963471.1;Parent=gene-RM588_RS09430;Dbxref=GenBank:WP_105963471.1;Name=WP_105963471.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302683.1;locus_tag=RM588_RS09430;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_105963471.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	30941	31174	.	-	.	ID=gene-RM588_RS09435;Name=RM588_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09435;old_locus_tag=RM588_09430
NZ_JAVRJR010000007.1	Protein Homology	CDS	30941	31174	.	-	0	ID=cds-WP_037576621.1;Parent=gene-RM588_RS09435;Dbxref=GenBank:WP_037576621.1;Name=WP_037576621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384524.1;locus_tag=RM588_RS09435;product=DUF1146 family protein;protein_id=WP_037576621.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	31425	31829	.	-	.	ID=gene-RM588_RS09440;Name=RM588_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09440;old_locus_tag=RM588_09435
NZ_JAVRJR010000007.1	Protein Homology	CDS	31425	31829	.	-	0	ID=cds-WP_103159247.1;Parent=gene-RM588_RS09440;Dbxref=GenBank:WP_103159247.1;Name=WP_103159247.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275244.1;locus_tag=RM588_RS09440;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_103159247.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	31851	33263	.	-	.	ID=gene-RM588_RS09445;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=RM588_RS09445;old_locus_tag=RM588_09440
NZ_JAVRJR010000007.1	Protein Homology	CDS	31851	33263	.	-	0	ID=cds-WP_037576616.1;Parent=gene-RM588_RS09445;Dbxref=GenBank:WP_037576616.1;Name=WP_037576616.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=RM588_RS09445;product=F0F1 ATP synthase subunit beta;protein_id=WP_037576616.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	33288	34154	.	-	.	ID=gene-RM588_RS09450;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=RM588_RS09450;old_locus_tag=RM588_09445
NZ_JAVRJR010000007.1	Protein Homology	CDS	33288	34154	.	-	0	ID=cds-WP_037576613.1;Parent=gene-RM588_RS09450;Dbxref=GenBank:WP_037576613.1;Name=WP_037576613.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157596.1;locus_tag=RM588_RS09450;product=ATP synthase F1 subunit gamma;protein_id=WP_037576613.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	34186	35694	.	-	.	ID=gene-RM588_RS09455;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=RM588_RS09455;old_locus_tag=RM588_09450
NZ_JAVRJR010000007.1	Protein Homology	CDS	34186	35694	.	-	0	ID=cds-WP_037576611.1;Parent=gene-RM588_RS09455;Dbxref=GenBank:WP_037576611.1;Name=WP_037576611.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500822.1;locus_tag=RM588_RS09455;product=F0F1 ATP synthase subunit alpha;protein_id=WP_037576611.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	35722	36261	.	-	.	ID=gene-RM588_RS09460;Name=RM588_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09460;old_locus_tag=RM588_09455
NZ_JAVRJR010000007.1	Protein Homology	CDS	35722	36261	.	-	0	ID=cds-WP_037576608.1;Parent=gene-RM588_RS09460;Dbxref=GenBank:WP_037576608.1;Name=WP_037576608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165805.1;locus_tag=RM588_RS09460;product=F0F1 ATP synthase subunit delta;protein_id=WP_037576608.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	36261	36767	.	-	.	ID=gene-RM588_RS09465;Name=RM588_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09465;old_locus_tag=RM588_09460
NZ_JAVRJR010000007.1	Protein Homology	CDS	36261	36767	.	-	0	ID=cds-WP_037576642.1;Parent=gene-RM588_RS09465;Dbxref=GenBank:WP_037576642.1;Name=WP_037576642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461233.1;locus_tag=RM588_RS09465;product=F0F1 ATP synthase subunit B;protein_id=WP_037576642.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	37042	37254	.	-	.	ID=gene-RM588_RS09470;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=RM588_RS09470;old_locus_tag=RM588_09465
NZ_JAVRJR010000007.1	Protein Homology	CDS	37042	37254	.	-	0	ID=cds-WP_037576605.1;Parent=gene-RM588_RS09470;Dbxref=GenBank:WP_037576605.1;Name=WP_037576605.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478963.1;locus_tag=RM588_RS09470;product=F0F1 ATP synthase subunit C;protein_id=WP_037576605.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	37297	38016	.	-	.	ID=gene-RM588_RS09475;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=RM588_RS09475;old_locus_tag=RM588_09470
NZ_JAVRJR010000007.1	Protein Homology	CDS	37297	38016	.	-	0	ID=cds-WP_037576603.1;Parent=gene-RM588_RS09475;Dbxref=GenBank:WP_037576603.1;Name=WP_037576603.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829936.1;locus_tag=RM588_RS09475;product=F0F1 ATP synthase subunit A;protein_id=WP_037576603.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	38036	38332	.	-	.	ID=gene-RM588_RS09480;Name=RM588_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09480;old_locus_tag=RM588_09475
NZ_JAVRJR010000007.1	Protein Homology	CDS	38036	38332	.	-	0	ID=cds-WP_229717321.1;Parent=gene-RM588_RS09480;Dbxref=GenBank:WP_229717321.1;Name=WP_229717321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165803.1;locus_tag=RM588_RS09480;product=hypothetical protein;protein_id=WP_229717321.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	38559	39698	.	-	.	ID=gene-RM588_RS09485;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM588_RS09485;old_locus_tag=RM588_09480
NZ_JAVRJR010000007.1	Protein Homology	CDS	38559	39698	.	-	0	ID=cds-WP_037576597.1;Parent=gene-RM588_RS09485;Dbxref=GenBank:WP_037576597.1;Name=WP_037576597.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912263.1;locus_tag=RM588_RS09485;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_037576597.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	39726	40355	.	-	.	ID=gene-RM588_RS09490;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=RM588_RS09490;old_locus_tag=RM588_09485
NZ_JAVRJR010000007.1	Protein Homology	CDS	39726	40355	.	-	0	ID=cds-WP_037576594.1;Parent=gene-RM588_RS09490;Dbxref=GenBank:WP_037576594.1;Name=WP_037576594.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=RM588_RS09490;product=uracil phosphoribosyltransferase;protein_id=WP_037576594.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	40378	41616	.	-	.	ID=gene-RM588_RS09495;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=RM588_RS09495;old_locus_tag=RM588_09490
NZ_JAVRJR010000007.1	Protein Homology	CDS	40378	41616	.	-	0	ID=cds-WP_103159245.1;Parent=gene-RM588_RS09495;Dbxref=GenBank:WP_103159245.1;Name=WP_103159245.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507071.1;locus_tag=RM588_RS09495;product=serine hydroxymethyltransferase;protein_id=WP_103159245.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	41639	42166	.	-	.	ID=gene-RM588_RS09500;Name=RM588_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09500;old_locus_tag=RM588_09495
NZ_JAVRJR010000007.1	Protein Homology	CDS	41639	42166	.	-	0	ID=cds-WP_037576588.1;Parent=gene-RM588_RS09500;Dbxref=GenBank:WP_037576588.1;Name=WP_037576588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613337.1;locus_tag=RM588_RS09500;product=TIGR01440 family protein;protein_id=WP_037576588.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	42291	42710	.	-	.	ID=gene-RM588_RS09505;Name=RM588_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09505;old_locus_tag=RM588_09500
NZ_JAVRJR010000007.1	Protein Homology	CDS	42291	42710	.	-	0	ID=cds-WP_037576586.1;Parent=gene-RM588_RS09505;Dbxref=GenBank:WP_037576586.1;Name=WP_037576586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613336.1;locus_tag=RM588_RS09505;product=low molecular weight protein arginine phosphatase;protein_id=WP_037576586.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	42707	43756	.	-	.	ID=gene-RM588_RS09510;Name=RM588_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09510;old_locus_tag=RM588_09505
NZ_JAVRJR010000007.1	Protein Homology	CDS	42707	43756	.	-	0	ID=cds-WP_172458459.1;Parent=gene-RM588_RS09510;Dbxref=GenBank:WP_172458459.1;Name=WP_172458459.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275230.1;locus_tag=RM588_RS09510;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_172458459.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	43844	44686	.	-	.	ID=gene-RM588_RS09515;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=RM588_RS09515;old_locus_tag=RM588_09510
NZ_JAVRJR010000007.1	Protein Homology	CDS	43844	44686	.	-	0	ID=cds-WP_311548167.1;Parent=gene-RM588_RS09515;Dbxref=GenBank:WP_311548167.1;Name=WP_311548167.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613334.1;locus_tag=RM588_RS09515;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_311548167.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	44676	45752	.	-	.	ID=gene-RM588_RS09520;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=RM588_RS09520;old_locus_tag=RM588_09515
NZ_JAVRJR010000007.1	Protein Homology	CDS	44676	45752	.	-	0	ID=cds-WP_103159242.1;Parent=gene-RM588_RS09520;Dbxref=GenBank:WP_103159242.1;Name=WP_103159242.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=RM588_RS09520;product=peptide chain release factor 1;protein_id=WP_103159242.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	45756	46352	.	-	.	ID=gene-RM588_RS09525;Name=RM588_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09525;old_locus_tag=RM588_09520
NZ_JAVRJR010000007.1	Protein Homology	CDS	45756	46352	.	-	0	ID=cds-WP_037576579.1;Parent=gene-RM588_RS09525;Dbxref=GenBank:WP_037576579.1;Name=WP_037576579.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=RM588_RS09525;product=thymidine kinase;protein_id=WP_037576579.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	46583	46837	.	-	.	ID=gene-RM588_RS09530;Name=RM588_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09530;old_locus_tag=RM588_09525
NZ_JAVRJR010000007.1	Protein Homology	CDS	46583	46837	.	-	0	ID=cds-WP_037576577.1;Parent=gene-RM588_RS09530;Dbxref=GenBank:WP_037576577.1;Name=WP_037576577.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500837.1;locus_tag=RM588_RS09530;product=type B 50S ribosomal protein L31;protein_id=WP_037576577.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	46959	48275	.	-	.	ID=gene-RM588_RS09535;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=RM588_RS09535;old_locus_tag=RM588_09530
NZ_JAVRJR010000007.1	Protein Homology	CDS	46959	48275	.	-	0	ID=cds-WP_037576574.1;Parent=gene-RM588_RS09535;Dbxref=GenBank:WP_037576574.1;Name=WP_037576574.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=RM588_RS09535;product=transcription termination factor Rho;protein_id=WP_037576574.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	48459	49889	.	-	.	ID=gene-RM588_RS09540;Name=RM588_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09540;old_locus_tag=RM588_09535
NZ_JAVRJR010000007.1	Protein Homology	CDS	48459	49889	.	-	0	ID=cds-WP_103159240.1;Parent=gene-RM588_RS09540;Dbxref=GenBank:WP_103159240.1;Name=WP_103159240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=RM588_RS09540;product=aldehyde dehydrogenase family protein;protein_id=WP_103159240.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	50103	50429	.	-	.	ID=gene-RM588_RS09545;Name=RM588_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09545;old_locus_tag=RM588_09540
NZ_JAVRJR010000007.1	Protein Homology	CDS	50103	50429	.	-	0	ID=cds-WP_103159239.1;Parent=gene-RM588_RS09545;Dbxref=GenBank:WP_103159239.1;Name=WP_103159239.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165793.1;locus_tag=RM588_RS09545;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_103159239.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	50478	51743	.	-	.	ID=gene-RM588_RS09550;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=RM588_RS09550;old_locus_tag=RM588_09545
NZ_JAVRJR010000007.1	Protein Homology	CDS	50478	51743	.	-	0	ID=cds-WP_103159238.1;Parent=gene-RM588_RS09550;Dbxref=GenBank:WP_103159238.1;Name=WP_103159238.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169282.1;locus_tag=RM588_RS09550;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_103159238.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	51987	52859	.	-	.	ID=gene-RM588_RS09555;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=RM588_RS09555;old_locus_tag=RM588_09550
NZ_JAVRJR010000007.1	Protein Homology	CDS	51987	52859	.	-	0	ID=cds-WP_037576564.1;Parent=gene-RM588_RS09555;Dbxref=GenBank:WP_037576564.1;Name=WP_037576564.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169281.1;locus_tag=RM588_RS09555;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_037576564.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	53076	53597	.	+	.	ID=gene-RM588_RS09560;Name=RM588_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09560;old_locus_tag=RM588_09555
NZ_JAVRJR010000007.1	Protein Homology	CDS	53076	53597	.	+	0	ID=cds-WP_037576561.1;Parent=gene-RM588_RS09560;Dbxref=GenBank:WP_037576561.1;Name=WP_037576561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808089.1;locus_tag=RM588_RS09560;product=DUF2529 family protein;protein_id=WP_037576561.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	53661	55268	.	-	.	ID=gene-RM588_RS09565;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=RM588_RS09565;old_locus_tag=RM588_09560
NZ_JAVRJR010000007.1	Protein Homology	CDS	53661	55268	.	-	0	ID=cds-WP_233655161.1;Parent=gene-RM588_RS09565;Dbxref=GenBank:WP_233655161.1;Name=WP_233655161.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500844.1;locus_tag=RM588_RS09565;product=CTP synthase;protein_id=WP_233655161.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	55664	56197	.	-	.	ID=gene-RM588_RS09570;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=RM588_RS09570;old_locus_tag=RM588_09565
NZ_JAVRJR010000007.1	Protein Homology	CDS	55664	56197	.	-	0	ID=cds-WP_037576556.1;Parent=gene-RM588_RS09570;Dbxref=GenBank:WP_037576556.1;Name=WP_037576556.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169276.1;locus_tag=RM588_RS09570;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_037576556.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	56366	57226	.	-	.	ID=gene-RM588_RS09575;Name=RM588_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09575;old_locus_tag=RM588_09570
NZ_JAVRJR010000007.1	Protein Homology	CDS	56366	57226	.	-	0	ID=cds-WP_103159237.1;Parent=gene-RM588_RS09575;Dbxref=GenBank:WP_103159237.1;Name=WP_103159237.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=RM588_RS09575;product=GNAT family N-acetyltransferase;protein_id=WP_103159237.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	57314	58915	.	+	.	ID=gene-RM588_RS09580;Name=RM588_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09580;old_locus_tag=RM588_09575
NZ_JAVRJR010000007.1	Protein Homology	CDS	57314	58915	.	+	0	ID=cds-WP_037576550.1;Parent=gene-RM588_RS09580;Dbxref=GenBank:WP_037576550.1;Name=WP_037576550.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613317.1;locus_tag=RM588_RS09580;product=BCCT family transporter;protein_id=WP_037576550.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	58958	59326	.	-	.	ID=gene-RM588_RS09585;Name=RM588_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09585;old_locus_tag=RM588_09580
NZ_JAVRJR010000007.1	Protein Homology	CDS	58958	59326	.	-	0	ID=cds-WP_103159236.1;Parent=gene-RM588_RS09585;Dbxref=GenBank:WP_103159236.1;Name=WP_103159236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900879.1;locus_tag=RM588_RS09585;product=VOC family protein;protein_id=WP_103159236.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	59433	60230	.	+	.	ID=gene-RM588_RS09590;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=RM588_RS09590;old_locus_tag=RM588_09585
NZ_JAVRJR010000007.1	Protein Homology	CDS	59433	60230	.	+	0	ID=cds-WP_037576548.1;Parent=gene-RM588_RS09590;Dbxref=GenBank:WP_037576548.1;Name=WP_037576548.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302660.1;locus_tag=RM588_RS09590;product=type II pantothenate kinase;protein_id=WP_037576548.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	60403	61074	.	-	.	ID=gene-RM588_RS09595;Name=RM588_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09595;old_locus_tag=RM588_09590
NZ_JAVRJR010000007.1	Protein Homology	CDS	60403	61074	.	-	0	ID=cds-WP_037576545.1;Parent=gene-RM588_RS09595;Dbxref=GenBank:WP_037576545.1;Name=WP_037576545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120545.1;locus_tag=RM588_RS09595;product=DUF2750 domain-containing protein;protein_id=WP_037576545.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	61165	62346	.	-	.	ID=gene-RM588_RS09600;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=RM588_RS09600;old_locus_tag=RM588_09595
NZ_JAVRJR010000007.1	Protein Homology	CDS	61165	62346	.	-	0	ID=cds-WP_103159235.1;Parent=gene-RM588_RS09600;Dbxref=GenBank:WP_103159235.1;Name=WP_103159235.1;Ontology_term=GO:0006555,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=L-methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165780.1;locus_tag=RM588_RS09600;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_103159235.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	62347	63531	.	-	.	ID=gene-RM588_RS09605;Name=RM588_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09605;old_locus_tag=RM588_09600
NZ_JAVRJR010000007.1	Protein Homology	CDS	62347	63531	.	-	0	ID=cds-WP_311548168.1;Parent=gene-RM588_RS09605;Dbxref=GenBank:WP_311548168.1;Name=WP_311548168.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426424.1;locus_tag=RM588_RS09605;product=M20 family metallopeptidase;protein_id=WP_311548168.1;transl_table=11
NZ_JAVRJR010000007.1	cmsearch	riboswitch	63626	63735	.	-	.	ID=id-NZ_JAVRJR010000007.1:63626..63735;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00162,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJR010000007.1	RefSeq	gene	63962	64429	.	+	.	ID=gene-RM588_RS09610;Name=RM588_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09610;old_locus_tag=RM588_09605
NZ_JAVRJR010000007.1	Protein Homology	CDS	63962	64429	.	+	0	ID=cds-WP_037576541.1;Parent=gene-RM588_RS09610;Dbxref=GenBank:WP_037576541.1;Name=WP_037576541.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=RM588_RS09610;product=S-ribosylhomocysteine lyase;protein_id=WP_037576541.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	64528	64881	.	-	.	ID=gene-RM588_RS09615;Name=RM588_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09615;old_locus_tag=RM588_09610
NZ_JAVRJR010000007.1	Protein Homology	CDS	64528	64881	.	-	0	ID=cds-WP_037576538.1;Parent=gene-RM588_RS09615;Dbxref=GenBank:WP_037576538.1;Name=WP_037576538.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169565.1;locus_tag=RM588_RS09615;product=DoxX family protein;protein_id=WP_037576538.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	64888	66189	.	-	.	ID=gene-RM588_RS09620;Name=RM588_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09620;old_locus_tag=RM588_09615
NZ_JAVRJR010000007.1	Protein Homology	CDS	64888	66189	.	-	0	ID=cds-WP_311548169.1;Parent=gene-RM588_RS09620;Dbxref=GenBank:WP_311548169.1;Name=WP_311548169.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_465517.1;locus_tag=RM588_RS09620;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_311548169.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	66399	67109	.	+	.	ID=gene-RM588_RS09625;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM588_RS09625;old_locus_tag=RM588_09620
NZ_JAVRJR010000007.1	Protein Homology	CDS	66399	67109	.	+	0	ID=cds-WP_037576533.1;Parent=gene-RM588_RS09625;Dbxref=GenBank:WP_037576533.1;Name=WP_037576533.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=RM588_RS09625;product=purine-nucleoside phosphorylase;protein_id=WP_037576533.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	67274	67699	.	-	.	ID=gene-RM588_RS09630;Name=RM588_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09630;old_locus_tag=RM588_09625
NZ_JAVRJR010000007.1	Protein Homology	CDS	67274	67699	.	-	0	ID=cds-WP_037576530.1;Parent=gene-RM588_RS09630;Dbxref=GenBank:WP_037576530.1;Name=WP_037576530.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123303.1;locus_tag=RM588_RS09630;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_037576530.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	67809	69236	.	-	.	ID=gene-RM588_RS09635;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM588_RS09635;old_locus_tag=RM588_09630
NZ_JAVRJR010000007.1	Protein Homology	CDS	67809	69236	.	-	0	ID=cds-WP_037576527.1;Parent=gene-RM588_RS09635;Dbxref=GenBank:WP_037576527.1;Name=WP_037576527.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506651.1;locus_tag=RM588_RS09635;product=Na+/H+ antiporter NhaC;protein_id=WP_037576527.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	69601	70965	.	-	.	ID=gene-RM588_RS09640;Name=RM588_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09640;old_locus_tag=RM588_09635
NZ_JAVRJR010000007.1	Protein Homology	CDS	69601	70965	.	-	0	ID=cds-WP_105963460.1;Parent=gene-RM588_RS09640;Dbxref=GenBank:WP_105963460.1;Name=WP_105963460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169559.1;locus_tag=RM588_RS09640;product=EVE domain-containing protein;protein_id=WP_105963460.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	71034	71270	.	-	.	ID=gene-RM588_RS09645;Name=RM588_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09645;old_locus_tag=RM588_09640
NZ_JAVRJR010000007.1	Protein Homology	CDS	71034	71270	.	-	0	ID=cds-WP_037576636.1;Parent=gene-RM588_RS09645;Dbxref=GenBank:WP_037576636.1;Name=WP_037576636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426417.1;locus_tag=RM588_RS09645;product=hypothetical protein;protein_id=WP_037576636.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	71287	72225	.	-	.	ID=gene-RM588_RS09650;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=RM588_RS09650;old_locus_tag=RM588_09645
NZ_JAVRJR010000007.1	Protein Homology	CDS	71287	72225	.	-	0	ID=cds-WP_105996986.1;Parent=gene-RM588_RS09650;Dbxref=GenBank:WP_105996986.1;Name=WP_105996986.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169557.1;locus_tag=RM588_RS09650;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_105996986.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	72392	73093	.	-	.	ID=gene-RM588_RS09655;Name=RM588_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09655;old_locus_tag=RM588_09650
NZ_JAVRJR010000007.1	Protein Homology	CDS	72392	73093	.	-	0	ID=cds-WP_037576519.1;Parent=gene-RM588_RS09655;Dbxref=GenBank:WP_037576519.1;Name=WP_037576519.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729460.1;locus_tag=RM588_RS09655;product=FadR/GntR family transcriptional regulator;protein_id=WP_037576519.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	73334	74245	.	+	.	ID=gene-RM588_RS09660;Name=RM588_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09660;old_locus_tag=RM588_09655
NZ_JAVRJR010000007.1	GeneMarkS-2+	CDS	73334	74245	.	+	0	ID=cds-WP_037576517.1;Parent=gene-RM588_RS09660;Dbxref=GenBank:WP_037576517.1;Name=WP_037576517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09660;product=hypothetical protein;protein_id=WP_037576517.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	74321	75175	.	-	.	ID=gene-RM588_RS09665;Name=RM588_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09665;old_locus_tag=RM588_09660
NZ_JAVRJR010000007.1	Protein Homology	CDS	74321	75175	.	-	0	ID=cds-WP_037576516.1;Parent=gene-RM588_RS09665;Dbxref=GenBank:WP_037576516.1;Name=WP_037576516.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451699.1;locus_tag=RM588_RS09665;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_037576516.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	75244	76023	.	-	.	ID=gene-RM588_RS09670;Name=RM588_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09670;old_locus_tag=RM588_09665
NZ_JAVRJR010000007.1	Protein Homology	CDS	75244	76023	.	-	0	ID=cds-WP_037576515.1;Parent=gene-RM588_RS09670;Dbxref=GenBank:WP_037576515.1;Name=WP_037576515.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219854.1;locus_tag=RM588_RS09670;product=ABC transporter ATP-binding protein;protein_id=WP_037576515.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	76126	77928	.	-	.	ID=gene-RM588_RS09675;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=RM588_RS09675;old_locus_tag=RM588_09670
NZ_JAVRJR010000007.1	Protein Homology	CDS	76126	77928	.	-	0	ID=cds-WP_105963455.1;Parent=gene-RM588_RS09675;Dbxref=GenBank:WP_105963455.1;Name=WP_105963455.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=RM588_RS09675;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_105963455.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	pseudogene	78658	78993	.	+	.	ID=gene-RM588_RS09680;Name=RM588_RS09680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS09680;old_locus_tag=RM588_09675;partial=true;pseudo=true;start_range=.,78658
NZ_JAVRJR010000007.1	Protein Homology	CDS	78658	78993	.	+	0	ID=cds-RM588_RS09680;Parent=gene-RM588_RS09680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729468.1;locus_tag=RM588_RS09680;partial=true;product=PTS mannitol transporter subunit IIA;pseudo=true;start_range=.,78658;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	78993	80096	.	+	.	ID=gene-RM588_RS09685;Name=RM588_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09685;old_locus_tag=RM588_09680
NZ_JAVRJR010000007.1	Protein Homology	CDS	78993	80096	.	+	0	ID=cds-WP_105996984.1;Parent=gene-RM588_RS09685;Dbxref=GenBank:WP_105996984.1;Name=WP_105996984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302636.1;locus_tag=RM588_RS09685;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_105996984.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	80152	81501	.	-	.	ID=gene-RM588_RS09690;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=RM588_RS09690;old_locus_tag=RM588_09685
NZ_JAVRJR010000007.1	Protein Homology	CDS	80152	81501	.	-	0	ID=cds-WP_037576510.1;Parent=gene-RM588_RS09690;Dbxref=GenBank:WP_037576510.1;Name=WP_037576510.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500881.1;locus_tag=RM588_RS09690;product=phosphoglucosamine mutase;protein_id=WP_037576510.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	81529	82461	.	-	.	ID=gene-RM588_RS09695;Name=RM588_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09695;old_locus_tag=RM588_09690
NZ_JAVRJR010000007.1	Protein Homology	CDS	81529	82461	.	-	0	ID=cds-WP_103159226.1;Parent=gene-RM588_RS09695;Dbxref=GenBank:WP_103159226.1;Name=WP_103159226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168353.1;locus_tag=RM588_RS09695;product=CdaR family protein;protein_id=WP_103159226.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	82462	83268	.	-	.	ID=gene-RM588_RS09700;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=RM588_RS09700;old_locus_tag=RM588_09695
NZ_JAVRJR010000007.1	Protein Homology	CDS	82462	83268	.	-	0	ID=cds-WP_037576505.1;Parent=gene-RM588_RS09700;Dbxref=GenBank:WP_037576505.1;Name=WP_037576505.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453752.1;locus_tag=RM588_RS09700;product=diadenylate cyclase CdaA;protein_id=WP_037576505.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	83421	84326	.	-	.	ID=gene-RM588_RS09705;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=RM588_RS09705;old_locus_tag=RM588_09700
NZ_JAVRJR010000007.1	Protein Homology	CDS	83421	84326	.	-	0	ID=cds-WP_105965785.1;Parent=gene-RM588_RS09705;Dbxref=GenBank:WP_105965785.1;Name=WP_105965785.1;Ontology_term=GO:0000050,GO:0004053,GO:0046872;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA,metal ion binding|0046872||IEA;go_process=urea cycle|0000050||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729471.1;locus_tag=RM588_RS09705;product=arginase;protein_id=WP_105965785.1;transl_table=11
NZ_JAVRJR010000007.1	RefSeq	gene	84806	84878	.	-	.	ID=gene-RM588_RS09710;Name=RM588_RS09710;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS09710;old_locus_tag=RM588_09705
NZ_JAVRJR010000007.1	tRNAscan-SE	tRNA	84806	84878	.	-	.	ID=rna-RM588_RS09710;Parent=gene-RM588_RS09710;anticodon=(pos:complement(84843..84845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09710;product=tRNA-Lys
NZ_JAVRJR010000007.1	tRNAscan-SE	exon	84806	84878	.	-	.	ID=exon-RM588_RS09710-1;Parent=rna-RM588_RS09710;anticodon=(pos:complement(84843..84845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09710;product=tRNA-Lys
NZ_JAVRJR010000007.1	RefSeq	gene	84882	84956	.	-	.	ID=gene-RM588_RS09715;Name=RM588_RS09715;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM588_RS09715;old_locus_tag=RM588_09710
NZ_JAVRJR010000007.1	tRNAscan-SE	tRNA	84882	84956	.	-	.	ID=rna-RM588_RS09715;Parent=gene-RM588_RS09715;anticodon=(pos:complement(84922..84924));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09715;product=tRNA-Gln
NZ_JAVRJR010000007.1	tRNAscan-SE	exon	84882	84956	.	-	.	ID=exon-RM588_RS09715-1;Parent=rna-RM588_RS09715;anticodon=(pos:complement(84922..84924));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM588_RS09715;product=tRNA-Gln
##sequence-region NZ_JAVRJR010000008.1 1 78902
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000008.1	RefSeq	region	1	78902	.	+	.	ID=NZ_JAVRJR010000008.1:1..78902;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000008.1	RefSeq	gene	1	377	.	-	.	ID=gene-RM588_RS09720;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM588_RS09720;old_locus_tag=RM588_09715;partial=true;start_range=.,1
NZ_JAVRJR010000008.1	Protein Homology	CDS	1	377	.	-	0	ID=cds-WP_311548170.1;Parent=gene-RM588_RS09720;Dbxref=GenBank:WP_311548170.1;Name=WP_311548170.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=RM588_RS09720;partial=true;product=deoxyribose-phosphate aldolase;protein_id=WP_311548170.1;start_range=.,1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	390	1748	.	-	.	ID=gene-RM588_RS09725;Name=RM588_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09725;old_locus_tag=RM588_09720
NZ_JAVRJR010000008.1	Protein Homology	CDS	390	1748	.	-	0	ID=cds-WP_311548171.1;Parent=gene-RM588_RS09725;Dbxref=GenBank:WP_311548171.1;Name=WP_311548171.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425879.1;locus_tag=RM588_RS09725;product=MFS transporter;protein_id=WP_311548171.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	1761	2468	.	-	.	ID=gene-RM588_RS09730;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM588_RS09730;old_locus_tag=RM588_09725
NZ_JAVRJR010000008.1	Protein Homology	CDS	1761	2468	.	-	0	ID=cds-WP_037577358.1;Parent=gene-RM588_RS09730;Dbxref=GenBank:WP_037577358.1;Name=WP_037577358.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011248855.1;locus_tag=RM588_RS09730;product=purine-nucleoside phosphorylase;protein_id=WP_037577358.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	2714	3451	.	-	.	ID=gene-RM588_RS09735;Name=RM588_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09735;old_locus_tag=RM588_09730
NZ_JAVRJR010000008.1	Protein Homology	CDS	2714	3451	.	-	0	ID=cds-WP_107364088.1;Parent=gene-RM588_RS09735;Dbxref=GenBank:WP_107364088.1;Name=WP_107364088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804655.1;locus_tag=RM588_RS09735;product=GntR family transcriptional regulator;protein_id=WP_107364088.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	3692	4432	.	-	.	ID=gene-RM588_RS09740;Name=RM588_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09740;old_locus_tag=RM588_09735
NZ_JAVRJR010000008.1	Protein Homology	CDS	3692	4432	.	-	0	ID=cds-WP_311548172.1;Parent=gene-RM588_RS09740;Dbxref=GenBank:WP_311548172.1;Name=WP_311548172.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM588_RS09740;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311548172.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	4458	5561	.	-	.	ID=gene-RM588_RS09745;Name=RM588_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09745;old_locus_tag=RM588_09740
NZ_JAVRJR010000008.1	Protein Homology	CDS	4458	5561	.	-	0	ID=cds-WP_037577364.1;Parent=gene-RM588_RS09745;Dbxref=GenBank:WP_037577364.1;Name=WP_037577364.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF016150.7;locus_tag=RM588_RS09745;product=DUF418 domain-containing protein;protein_id=WP_037577364.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	5911	6114	.	-	.	ID=gene-RM588_RS09750;Name=RM588_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09750;old_locus_tag=RM588_09745
NZ_JAVRJR010000008.1	Protein Homology	CDS	5911	6114	.	-	0	ID=cds-WP_182470789.1;Parent=gene-RM588_RS09750;Dbxref=GenBank:WP_182470789.1;Name=WP_182470789.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167695.1;locus_tag=RM588_RS09750;product=helix-turn-helix domain-containing protein;protein_id=WP_182470789.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	6125	6592	.	-	.	ID=gene-RM588_RS09755;Name=RM588_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09755;old_locus_tag=RM588_09750
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	6125	6592	.	-	0	ID=cds-WP_311548173.1;Parent=gene-RM588_RS09755;Dbxref=GenBank:WP_311548173.1;Name=WP_311548173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09755;product=hypothetical protein;protein_id=WP_311548173.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	6721	7425	.	-	.	ID=gene-RM588_RS09760;Name=RM588_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09760;old_locus_tag=RM588_09755
NZ_JAVRJR010000008.1	Protein Homology	CDS	6721	7425	.	-	0	ID=cds-WP_107399169.1;Parent=gene-RM588_RS09760;Dbxref=GenBank:WP_107399169.1;Name=WP_107399169.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922329.1;locus_tag=RM588_RS09760;product=GntR family transcriptional regulator;protein_id=WP_107399169.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	7581	9020	.	+	.	ID=gene-RM588_RS09765;Name=RM588_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09765;old_locus_tag=RM588_09760
NZ_JAVRJR010000008.1	Protein Homology	CDS	7581	9020	.	+	0	ID=cds-WP_311548174.1;Parent=gene-RM588_RS09765;Dbxref=GenBank:WP_311548174.1;Name=WP_311548174.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163982.1;locus_tag=RM588_RS09765;product=6-phospho-beta-glucosidase;protein_id=WP_311548174.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	9121	9618	.	-	.	ID=gene-RM588_RS09770;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM588_RS09770;old_locus_tag=RM588_09765
NZ_JAVRJR010000008.1	Protein Homology	CDS	9121	9618	.	-	0	ID=cds-WP_103159643.1;Parent=gene-RM588_RS09770;Dbxref=GenBank:WP_103159643.1;Name=WP_103159643.1;gbkey=CDS;gene=isaB;inference=COORDINATES: protein motif:HMM:NF047686.1;locus_tag=RM588_RS09770;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_103159643.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	9841	10707	.	-	.	ID=gene-RM588_RS09775;Name=RM588_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09775;old_locus_tag=RM588_09770
NZ_JAVRJR010000008.1	Protein Homology	CDS	9841	10707	.	-	0	ID=cds-WP_375713820.1;Parent=gene-RM588_RS09775;Dbxref=GenBank:WP_375713820.1;Name=WP_375713820.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176733.1;locus_tag=RM588_RS09775;product=alpha/beta hydrolase;protein_id=WP_375713820.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	10778	11608	.	-	.	ID=gene-RM588_RS09780;Name=RM588_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09780;old_locus_tag=RM588_09775
NZ_JAVRJR010000008.1	Protein Homology	CDS	10778	11608	.	-	0	ID=cds-WP_311548175.1;Parent=gene-RM588_RS09780;Dbxref=GenBank:WP_311548175.1;Name=WP_311548175.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.7;locus_tag=RM588_RS09780;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_311548175.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	12364	13995	.	+	.	ID=gene-RM588_RS09785;Name=RM588_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09785;old_locus_tag=RM588_09780
NZ_JAVRJR010000008.1	Protein Homology	CDS	12364	13995	.	+	0	ID=cds-WP_311548176.1;Parent=gene-RM588_RS09785;Dbxref=GenBank:WP_311548176.1;Name=WP_311548176.1;Ontology_term=GO:0019865;gbkey=CDS;go_function=immunoglobulin binding|0019865||IEA;inference=COORDINATES: protein motif:HMM:NF014293.7;locus_tag=RM588_RS09785;product=B domain-containing protein;protein_id=WP_311548176.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	14101	15876	.	-	.	ID=gene-RM588_RS09790;Name=RM588_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09790;old_locus_tag=RM588_09785
NZ_JAVRJR010000008.1	Protein Homology	CDS	14101	15876	.	-	0	ID=cds-WP_103159607.1;Parent=gene-RM588_RS09790;Dbxref=GenBank:WP_103159607.1;Name=WP_103159607.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=RM588_RS09790;product=oleate hydratase;protein_id=WP_103159607.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	16041	16625	.	+	.	ID=gene-RM588_RS09795;Name=RM588_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09795;old_locus_tag=RM588_09790
NZ_JAVRJR010000008.1	Protein Homology	CDS	16041	16625	.	+	0	ID=cds-WP_103159608.1;Parent=gene-RM588_RS09795;Dbxref=GenBank:WP_103159608.1;Name=WP_103159608.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425866.1;locus_tag=RM588_RS09795;product=TetR/AcrR family transcriptional regulator;protein_id=WP_103159608.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	16692	19520	.	-	.	ID=gene-RM588_RS09800;Name=RM588_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09800;old_locus_tag=RM588_09795
NZ_JAVRJR010000008.1	Protein Homology	CDS	16692	19520	.	-	0	ID=cds-WP_311548177.1;Parent=gene-RM588_RS09800;Dbxref=GenBank:WP_311548177.1;Name=WP_311548177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=RM588_RS09800;product=YhgE/Pip family protein;protein_id=WP_311548177.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	19731	21770	.	+	.	ID=gene-RM588_RS09805;Name=RM588_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09805;old_locus_tag=RM588_09800
NZ_JAVRJR010000008.1	Protein Homology	CDS	19731	21770	.	+	0	ID=cds-WP_311548178.1;Parent=gene-RM588_RS09805;Dbxref=GenBank:WP_311548178.1;Name=WP_311548178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006360.0;locus_tag=RM588_RS09805;product=amidase domain-containing protein;protein_id=WP_311548178.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	21823	23571	.	-	.	ID=gene-RM588_RS09810;Name=RM588_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09810;old_locus_tag=RM588_09805
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	21823	23571	.	-	0	ID=cds-WP_311548179.1;Parent=gene-RM588_RS09810;Dbxref=GenBank:WP_311548179.1;Name=WP_311548179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09810;product=hypothetical protein;protein_id=WP_311548179.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	24215	24916	.	+	.	ID=gene-RM588_RS09815;Name=RM588_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09815;old_locus_tag=RM588_09810
NZ_JAVRJR010000008.1	Protein Homology	CDS	24215	24916	.	+	0	ID=cds-WP_311548180.1;Parent=gene-RM588_RS09815;Dbxref=GenBank:WP_311548180.1;Name=WP_311548180.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769156.1;locus_tag=RM588_RS09815;product=exotoxin beta-grasp domain-containing protein;protein_id=WP_311548180.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	24936	26498	.	+	.	ID=gene-RM588_RS09820;Name=RM588_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09820;old_locus_tag=RM588_09815
NZ_JAVRJR010000008.1	Protein Homology	CDS	24936	26498	.	+	0	ID=cds-WP_311548181.1;Parent=gene-RM588_RS09820;Dbxref=GenBank:WP_311548181.1;Name=WP_311548181.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208910.1;locus_tag=RM588_RS09820;product=YSIRK-type signal peptide-containing protein;protein_id=WP_311548181.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	26608	27567	.	-	.	ID=gene-RM588_RS09825;Name=RM588_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09825;old_locus_tag=RM588_09820
NZ_JAVRJR010000008.1	Protein Homology	CDS	26608	27567	.	-	0	ID=cds-WP_233655212.1;Parent=gene-RM588_RS09825;Dbxref=GenBank:WP_233655212.1;Name=WP_233655212.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140911.1;locus_tag=RM588_RS09825;product=amidohydrolase family protein;protein_id=WP_233655212.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	27647	29029	.	-	.	ID=gene-RM588_RS09830;Name=RM588_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09830;old_locus_tag=RM588_09825
NZ_JAVRJR010000008.1	Protein Homology	CDS	27647	29029	.	-	0	ID=cds-WP_233655225.1;Parent=gene-RM588_RS09830;Dbxref=GenBank:WP_233655225.1;Name=WP_233655225.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467307.1;locus_tag=RM588_RS09830;product=MDR family MFS transporter;protein_id=WP_233655225.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	29232	29765	.	-	.	ID=gene-RM588_RS09835;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=RM588_RS09835;old_locus_tag=RM588_09830
NZ_JAVRJR010000008.1	Protein Homology	CDS	29232	29765	.	-	0	ID=cds-WP_105963043.1;Parent=gene-RM588_RS09835;Dbxref=GenBank:WP_105963043.1;Name=WP_105963043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460588.1;locus_tag=RM588_RS09835;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_105963043.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	29752	31614	.	-	.	ID=gene-RM588_RS09840;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=RM588_RS09840;old_locus_tag=RM588_09835
NZ_JAVRJR010000008.1	Protein Homology	CDS	29752	31614	.	-	0	ID=cds-WP_037576381.1;Parent=gene-RM588_RS09840;Dbxref=GenBank:WP_037576381.1;Name=WP_037576381.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486864.1;locus_tag=RM588_RS09840;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_037576381.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	31870	32793	.	-	.	ID=gene-RM588_RS09845;Name=RM588_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09845;old_locus_tag=RM588_09840
NZ_JAVRJR010000008.1	Protein Homology	CDS	31870	32793	.	-	0	ID=cds-WP_037576384.1;Parent=gene-RM588_RS09845;Dbxref=GenBank:WP_037576384.1;Name=WP_037576384.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302238.1;locus_tag=RM588_RS09845;product=lactate/malate family dehydrogenase;protein_id=WP_037576384.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	32956	33849	.	-	.	ID=gene-RM588_RS09850;Name=RM588_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09850;old_locus_tag=RM588_09845
NZ_JAVRJR010000008.1	Protein Homology	CDS	32956	33849	.	-	0	ID=cds-WP_037576386.1;Parent=gene-RM588_RS09850;Dbxref=GenBank:WP_037576386.1;Name=WP_037576386.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424638.1;locus_tag=RM588_RS09850;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_037576386.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	33951	34112	.	-	.	ID=gene-RM588_RS09855;Name=RM588_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09855;old_locus_tag=RM588_09850
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	33951	34112	.	-	0	ID=cds-WP_157946070.1;Parent=gene-RM588_RS09855;Dbxref=GenBank:WP_157946070.1;Name=WP_157946070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09855;product=hypothetical protein;protein_id=WP_157946070.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	34146	35297	.	-	.	ID=gene-RM588_RS09860;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM588_RS09860;old_locus_tag=RM588_09855
NZ_JAVRJR010000008.1	Protein Homology	CDS	34146	35297	.	-	0	ID=cds-WP_037576388.1;Parent=gene-RM588_RS09860;Dbxref=GenBank:WP_037576388.1;Name=WP_037576388.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499269.1;locus_tag=RM588_RS09860;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_037576388.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	35327	35722	.	-	.	ID=gene-RM588_RS09865;Name=RM588_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09865;old_locus_tag=RM588_09860
NZ_JAVRJR010000008.1	Protein Homology	CDS	35327	35722	.	-	0	ID=cds-WP_037576389.1;Parent=gene-RM588_RS09865;Dbxref=GenBank:WP_037576389.1;Name=WP_037576389.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479145.1;locus_tag=RM588_RS09865;product=PTS sugar transporter subunit IIA;protein_id=WP_037576389.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	35739	36638	.	-	.	ID=gene-RM588_RS09870;Name=RM588_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09870;old_locus_tag=RM588_09865
NZ_JAVRJR010000008.1	Protein Homology	CDS	35739	36638	.	-	0	ID=cds-WP_107363801.1;Parent=gene-RM588_RS09870;Dbxref=GenBank:WP_107363801.1;Name=WP_107363801.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=RM588_RS09870;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_107363801.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	36625	37533	.	-	.	ID=gene-RM588_RS09875;Name=RM588_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09875;old_locus_tag=RM588_09870
NZ_JAVRJR010000008.1	Protein Homology	CDS	36625	37533	.	-	0	ID=cds-WP_103159413.1;Parent=gene-RM588_RS09875;Dbxref=GenBank:WP_103159413.1;Name=WP_103159413.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460936.1;locus_tag=RM588_RS09875;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_103159413.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	37550	38029	.	-	.	ID=gene-RM588_RS09880;Name=RM588_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09880;old_locus_tag=RM588_09875
NZ_JAVRJR010000008.1	Protein Homology	CDS	37550	38029	.	-	0	ID=cds-WP_107366569.1;Parent=gene-RM588_RS09880;Dbxref=GenBank:WP_107366569.1;Name=WP_107366569.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=RM588_RS09880;product=PTS sugar transporter subunit IIB;protein_id=WP_107366569.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	38047	39813	.	-	.	ID=gene-RM588_RS09885;Name=RM588_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09885;old_locus_tag=RM588_09880
NZ_JAVRJR010000008.1	Protein Homology	CDS	38047	39813	.	-	0	ID=cds-WP_311548183.1;Parent=gene-RM588_RS09885;Dbxref=GenBank:WP_311548183.1;Name=WP_311548183.1;Ontology_term=GO:0005975,GO:0004565;gbkey=CDS;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425911.1;locus_tag=RM588_RS09885;product=glycoside hydrolase family 35 protein;protein_id=WP_311548183.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	39830	40774	.	-	.	ID=gene-RM588_RS09890;Name=RM588_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09890;old_locus_tag=RM588_09885
NZ_JAVRJR010000008.1	Protein Homology	CDS	39830	40774	.	-	0	ID=cds-WP_103159410.1;Parent=gene-RM588_RS09890;Dbxref=GenBank:WP_103159410.1;Name=WP_103159410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017001107.1;locus_tag=RM588_RS09890;product=tagatose 1%2C6-diphosphate aldolase;protein_id=WP_103159410.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	40869	41987	.	-	.	ID=gene-RM588_RS09895;Name=RM588_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09895;old_locus_tag=RM588_09890
NZ_JAVRJR010000008.1	Protein Homology	CDS	40869	41987	.	-	0	ID=cds-WP_107366567.1;Parent=gene-RM588_RS09895;Dbxref=GenBank:WP_107366567.1;Name=WP_107366567.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460940.1;locus_tag=RM588_RS09895;product=SIS domain-containing protein;protein_id=WP_107366567.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	42015	42728	.	-	.	ID=gene-RM588_RS09900;Name=RM588_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09900;old_locus_tag=RM588_09895
NZ_JAVRJR010000008.1	Protein Homology	CDS	42015	42728	.	-	0	ID=cds-WP_103159408.1;Parent=gene-RM588_RS09900;Dbxref=GenBank:WP_103159408.1;Name=WP_103159408.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460941.1;locus_tag=RM588_RS09900;product=GntR family transcriptional regulator;protein_id=WP_103159408.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	43497	43655	.	-	.	ID=gene-RM588_RS11365;Name=RM588_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS11365
NZ_JAVRJR010000008.1	Protein Homology	CDS	43497	43655	.	-	0	ID=cds-WP_107366565.1;Parent=gene-RM588_RS11365;Dbxref=GenBank:WP_107366565.1;Name=WP_107366565.1;Ontology_term=GO:0042742,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: protein motif:HMM:NF016486.7;locus_tag=RM588_RS11365;product=type A2 lanthipeptide;protein_id=WP_107366565.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	44233	44874	.	-	.	ID=gene-RM588_RS09905;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=RM588_RS09905;old_locus_tag=RM588_09900
NZ_JAVRJR010000008.1	Protein Homology	CDS	44233	44874	.	-	0	ID=cds-WP_165806042.1;Parent=gene-RM588_RS09905;Dbxref=GenBank:WP_165806042.1;Name=WP_165806042.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=RM588_RS09905;product=pyroglutamyl-peptidase I;protein_id=WP_165806042.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	44890	45816	.	-	.	ID=gene-RM588_RS09910;Name=RM588_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09910;old_locus_tag=RM588_09905
NZ_JAVRJR010000008.1	Protein Homology	CDS	44890	45816	.	-	0	ID=cds-WP_105963050.1;Parent=gene-RM588_RS09910;Dbxref=GenBank:WP_105963050.1;Name=WP_105963050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302429.1;locus_tag=RM588_RS09910;product=DUF979 domain-containing protein;protein_id=WP_105963050.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	45809	46504	.	-	.	ID=gene-RM588_RS09915;Name=RM588_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09915;old_locus_tag=RM588_09910
NZ_JAVRJR010000008.1	Protein Homology	CDS	45809	46504	.	-	0	ID=cds-WP_107378396.1;Parent=gene-RM588_RS09915;Dbxref=GenBank:WP_107378396.1;Name=WP_107378396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468807.1;locus_tag=RM588_RS09915;product=DUF969 domain-containing protein;protein_id=WP_107378396.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	46722	47699	.	+	.	ID=gene-RM588_RS09920;Name=RM588_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09920;old_locus_tag=RM588_09915
NZ_JAVRJR010000008.1	Protein Homology	CDS	46722	47699	.	+	0	ID=cds-WP_210433432.1;Parent=gene-RM588_RS09920;Dbxref=GenBank:WP_210433432.1;Name=WP_210433432.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447550.1;locus_tag=RM588_RS09920;product=tRNA dihydrouridine synthase;protein_id=WP_210433432.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	47848	48927	.	-	.	ID=gene-RM588_RS09925;Name=RM588_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09925;old_locus_tag=RM588_09920
NZ_JAVRJR010000008.1	Protein Homology	CDS	47848	48927	.	-	0	ID=cds-WP_107366686.1;Parent=gene-RM588_RS09925;Dbxref=GenBank:WP_107366686.1;Name=WP_107366686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722996.1;locus_tag=RM588_RS09925;product=aldo/keto reductase;protein_id=WP_107366686.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	49122	49262	.	+	.	ID=gene-RM588_RS09930;Name=RM588_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09930;old_locus_tag=RM588_09925
NZ_JAVRJR010000008.1	Protein Homology	CDS	49122	49262	.	+	0	ID=cds-WP_165806043.1;Parent=gene-RM588_RS09930;Dbxref=GenBank:WP_165806043.1;Name=WP_165806043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480129.1;locus_tag=RM588_RS09930;product=hypothetical protein;protein_id=WP_165806043.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	49565	49780	.	+	.	ID=gene-RM588_RS09935;Name=RM588_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09935;old_locus_tag=RM588_09930
NZ_JAVRJR010000008.1	Protein Homology	CDS	49565	49780	.	+	0	ID=cds-WP_107366685.1;Parent=gene-RM588_RS09935;Dbxref=GenBank:WP_107366685.1;Name=WP_107366685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480131.1;locus_tag=RM588_RS09935;product=hypothetical protein;protein_id=WP_107366685.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	50138	50329	.	-	.	ID=gene-RM588_RS09940;Name=RM588_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09940;old_locus_tag=RM588_09935
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	50138	50329	.	-	0	ID=cds-WP_107366684.1;Parent=gene-RM588_RS09940;Dbxref=GenBank:WP_107366684.1;Name=WP_107366684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09940;product=hypothetical protein;protein_id=WP_107366684.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	50738	51283	.	-	.	ID=gene-RM588_RS09945;Name=RM588_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09945;old_locus_tag=RM588_09940
NZ_JAVRJR010000008.1	Protein Homology	CDS	50738	51283	.	-	0	ID=cds-WP_180706701.1;Parent=gene-RM588_RS09945;Dbxref=GenBank:WP_180706701.1;Name=WP_180706701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592150.1;locus_tag=RM588_RS09945;product=YdhK family protein;protein_id=WP_180706701.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	51301	53364	.	-	.	ID=gene-RM588_RS09950;Name=RM588_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09950;old_locus_tag=RM588_09945
NZ_JAVRJR010000008.1	Protein Homology	CDS	51301	53364	.	-	0	ID=cds-WP_180706702.1;Parent=gene-RM588_RS09950;Dbxref=GenBank:WP_180706702.1;Name=WP_180706702.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=RM588_RS09950;product=heavy metal translocating P-type ATPase;protein_id=WP_180706702.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	53963	54946	.	-	.	ID=gene-RM588_RS09955;Name=RM588_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09955;old_locus_tag=RM588_09950
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	53963	54946	.	-	0	ID=cds-WP_105997113.1;Parent=gene-RM588_RS09955;Dbxref=GenBank:WP_105997113.1;Name=WP_105997113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09955;product=hypothetical protein;protein_id=WP_105997113.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	55111	56724	.	-	.	ID=gene-RM588_RS09960;Name=RM588_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09960;old_locus_tag=RM588_09955
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	55111	56724	.	-	0	ID=cds-WP_311548184.1;Parent=gene-RM588_RS09960;Dbxref=GenBank:WP_311548184.1;Name=WP_311548184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS09960;product=hypothetical protein;protein_id=WP_311548184.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	56758	57831	.	-	.	ID=gene-RM588_RS09965;Name=RM588_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09965;old_locus_tag=RM588_09960
NZ_JAVRJR010000008.1	Protein Homology	CDS	56758	57831	.	-	0	ID=cds-WP_311548185.1;Parent=gene-RM588_RS09965;Dbxref=GenBank:WP_311548185.1;Name=WP_311548185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001099283.1;locus_tag=RM588_RS09965;product=hypothetical protein;protein_id=WP_311548185.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	57973	58263	.	+	.	ID=gene-RM588_RS09970;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM588_RS09970;old_locus_tag=RM588_09965
NZ_JAVRJR010000008.1	Protein Homology	CDS	57973	58263	.	+	0	ID=cds-WP_053027472.1;Parent=gene-RM588_RS09970;Dbxref=GenBank:WP_053027472.1;Name=WP_053027472.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875424.1;locus_tag=RM588_RS09970;product=cassette chromosome ssDNA-binding protein;protein_id=WP_053027472.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	58263	60056	.	+	.	ID=gene-RM588_RS09975;Name=cch1;gbkey=Gene;gene=cch1;gene_biotype=protein_coding;locus_tag=RM588_RS09975;old_locus_tag=RM588_09970
NZ_JAVRJR010000008.1	Protein Homology	CDS	58263	60056	.	+	0	ID=cds-WP_105997116.1;Parent=gene-RM588_RS09975;Dbxref=GenBank:WP_105997116.1;Name=WP_105997116.1;Ontology_term=GO:0043138;gbkey=CDS;gene=cch1;go_function=3'-5' DNA helicase activity|0043138||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069958.1;locus_tag=RM588_RS09975;product=cassette chromosome replicative helicase;protein_id=WP_105997116.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	60125	60400	.	+	.	ID=gene-RM588_RS09980;Name=RM588_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09980;old_locus_tag=RM588_09975
NZ_JAVRJR010000008.1	Protein Homology	CDS	60125	60400	.	+	0	ID=cds-WP_105997117.1;Parent=gene-RM588_RS09980;Dbxref=GenBank:WP_105997117.1;Name=WP_105997117.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100996.1;locus_tag=RM588_RS09980;product=recombinase family protein;protein_id=WP_105997117.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	60592	61941	.	+	.	ID=gene-RM588_RS09985;Name=ccrA;gbkey=Gene;gene=ccrA;gene_biotype=protein_coding;locus_tag=RM588_RS09985;old_locus_tag=RM588_09980
NZ_JAVRJR010000008.1	Protein Homology	CDS	60592	61941	.	+	0	ID=cds-WP_096536501.1;Parent=gene-RM588_RS09985;Dbxref=GenBank:WP_096536501.1;Name=WP_096536501.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrA;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=RM588_RS09985;product=cassette chromosome recombinase CcrA;protein_id=WP_096536501.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	61963	63588	.	+	.	ID=gene-RM588_RS09990;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=RM588_RS09990;old_locus_tag=RM588_09985
NZ_JAVRJR010000008.1	Protein Homology	CDS	61963	63588	.	+	0	ID=cds-WP_119508630.1;Parent=gene-RM588_RS09990;Dbxref=GenBank:WP_119508630.1;Name=WP_119508630.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrB;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186610.1;locus_tag=RM588_RS09990;product=cassette chromosome recombinase CcrB;protein_id=WP_119508630.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	64060	64398	.	+	.	ID=gene-RM588_RS09995;Name=RM588_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS09995;old_locus_tag=RM588_09990
NZ_JAVRJR010000008.1	Protein Homology	CDS	64060	64398	.	+	0	ID=cds-WP_119508628.1;Parent=gene-RM588_RS09995;Dbxref=GenBank:WP_119508628.1;Name=WP_119508628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171559.1;locus_tag=RM588_RS09995;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WP_119508628.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	64494	64805	.	+	.	ID=gene-RM588_RS10000;Name=RM588_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10000;old_locus_tag=RM588_09995
NZ_JAVRJR010000008.1	Protein Homology	CDS	64494	64805	.	+	0	ID=cds-WP_105966009.1;Parent=gene-RM588_RS10000;Dbxref=GenBank:WP_105966009.1;Name=WP_105966009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833212.1;locus_tag=RM588_RS10000;product=DUF960 family protein;protein_id=WP_105966009.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	64818	65327	.	+	.	ID=gene-RM588_RS10005;Name=RM588_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10005;old_locus_tag=RM588_10000
NZ_JAVRJR010000008.1	Protein Homology	CDS	64818	65327	.	+	0	ID=cds-WP_119508626.1;Parent=gene-RM588_RS10005;Dbxref=GenBank:WP_119508626.1;Name=WP_119508626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092170.1;locus_tag=RM588_RS10005;product=DUF1643 domain-containing protein;protein_id=WP_119508626.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	65345	65560	.	+	.	ID=gene-RM588_RS10010;Name=RM588_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10010;old_locus_tag=RM588_10005
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	65345	65560	.	+	0	ID=cds-WP_119508624.1;Parent=gene-RM588_RS10010;Dbxref=GenBank:WP_119508624.1;Name=WP_119508624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10010;product=hypothetical protein;protein_id=WP_119508624.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	65767	66642	.	+	.	ID=gene-RM588_RS10015;Name=RM588_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10015;old_locus_tag=RM588_10010
NZ_JAVRJR010000008.1	Protein Homology	CDS	65767	66642	.	+	0	ID=cds-WP_119508622.1;Parent=gene-RM588_RS10015;Dbxref=GenBank:WP_119508622.1;Name=WP_119508622.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373152.1;locus_tag=RM588_RS10015;product=helix-turn-helix transcriptional regulator;protein_id=WP_119508622.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	66950	67144	.	+	.	ID=gene-RM588_RS10020;Name=RM588_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10020;old_locus_tag=RM588_10015
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	66950	67144	.	+	0	ID=cds-WP_311548187.1;Parent=gene-RM588_RS10020;Dbxref=GenBank:WP_311548187.1;Name=WP_311548187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10020;product=hypothetical protein;protein_id=WP_311548187.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	67162	67464	.	+	.	ID=gene-RM588_RS10025;Name=RM588_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10025;old_locus_tag=RM588_10020
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	67162	67464	.	+	0	ID=cds-WP_037576883.1;Parent=gene-RM588_RS10025;Dbxref=GenBank:WP_037576883.1;Name=WP_037576883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10025;product=hypothetical protein;protein_id=WP_037576883.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	67471	67650	.	+	.	ID=gene-RM588_RS10030;Name=RM588_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10030;old_locus_tag=RM588_10025
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	67471	67650	.	+	0	ID=cds-WP_037576880.1;Parent=gene-RM588_RS10030;Dbxref=GenBank:WP_037576880.1;Name=WP_037576880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10030;product=hypothetical protein;protein_id=WP_037576880.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	67682	68458	.	+	.	ID=gene-RM588_RS10035;Name=RM588_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10035;old_locus_tag=RM588_10030
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	67682	68458	.	+	0	ID=cds-WP_212574908.1;Parent=gene-RM588_RS10035;Dbxref=GenBank:WP_212574908.1;Name=WP_212574908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10035;product=EcsC family protein;protein_id=WP_212574908.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	68556	71108	.	-	.	ID=gene-RM588_RS10040;Name=RM588_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10040;old_locus_tag=RM588_10035
NZ_JAVRJR010000008.1	Protein Homology	CDS	68556	71108	.	-	0	ID=cds-WP_164097217.1;Parent=gene-RM588_RS10040;Dbxref=GenBank:WP_164097217.1;Name=WP_164097217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293298.1;locus_tag=RM588_RS10040;product=DEAD/DEAH box helicase family protein;protein_id=WP_164097217.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	71111	73039	.	-	.	ID=gene-RM588_RS10045;Name=RM588_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10045;old_locus_tag=RM588_10040
NZ_JAVRJR010000008.1	Protein Homology	CDS	71111	73039	.	-	0	ID=cds-WP_119508616.1;Parent=gene-RM588_RS10045;Dbxref=GenBank:WP_119508616.1;Name=WP_119508616.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489469.1;locus_tag=RM588_RS10045;product=DNA methyltransferase;protein_id=WP_119508616.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	74290	76215	.	-	.	ID=gene-RM588_RS10050;Name=RM588_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10050;old_locus_tag=RM588_10045
NZ_JAVRJR010000008.1	Protein Homology	CDS	74290	76215	.	-	0	ID=cds-WP_031920603.1;Parent=gene-RM588_RS10050;Dbxref=GenBank:WP_031920603.1;Name=WP_031920603.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175150.1;locus_tag=RM588_RS10050;product=heavy metal translocating P-type ATPase;protein_id=WP_031920603.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	76545	76871	.	-	.	ID=gene-RM588_RS10055;Name=RM588_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10055;old_locus_tag=RM588_10050
NZ_JAVRJR010000008.1	Protein Homology	CDS	76545	76871	.	-	0	ID=cds-WP_031920602.1;Parent=gene-RM588_RS10055;Dbxref=GenBank:WP_031920602.1;Name=WP_031920602.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391495.1;locus_tag=RM588_RS10055;product=ArsR/SmtB family transcription factor;protein_id=WP_031920602.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	77078	77437	.	+	.	ID=gene-RM588_RS10060;Name=RM588_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10060;old_locus_tag=RM588_10055
NZ_JAVRJR010000008.1	Protein Homology	CDS	77078	77437	.	+	0	ID=cds-WP_311548190.1;Parent=gene-RM588_RS10060;Dbxref=GenBank:WP_311548190.1;Name=WP_311548190.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175149.1;locus_tag=RM588_RS10060;product=ZIP family metal transporter;protein_id=WP_311548190.1;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	pseudogene	77549	77887	.	-	.	ID=gene-RM588_RS10065;Name=RM588_RS10065;end_range=77887,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS10065;old_locus_tag=RM588_10060;partial=true;pseudo=true
NZ_JAVRJR010000008.1	Protein Homology	CDS	77549	77887	.	-	0	ID=cds-RM588_RS10065;Parent=gene-RM588_RS10065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=77887,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=RM588_RS10065;partial=true;product=cassette chromosome recombinase CcrA;pseudo=true;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	pseudogene	77896	78216	.	+	.	ID=gene-RM588_RS10070;Name=RM588_RS10070;end_range=78216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM588_RS10070;old_locus_tag=RM588_10065;partial=true;pseudo=true;start_range=.,77896
NZ_JAVRJR010000008.1	Protein Homology	CDS	77896	78216	.	+	0	ID=cds-RM588_RS10070;Parent=gene-RM588_RS10070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=78216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573627.1;locus_tag=RM588_RS10070;partial=true;product=cassette chromosome replicative helicase;pseudo=true;start_range=.,77896;transl_table=11
NZ_JAVRJR010000008.1	RefSeq	gene	78188	78463	.	+	.	ID=gene-RM588_RS10075;Name=RM588_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10075;old_locus_tag=RM588_10070
NZ_JAVRJR010000008.1	GeneMarkS-2+	CDS	78188	78463	.	+	0	ID=cds-WP_119627606.1;Parent=gene-RM588_RS10075;Dbxref=GenBank:WP_119627606.1;Name=WP_119627606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10075;product=hypothetical protein;protein_id=WP_119627606.1;transl_table=11
##sequence-region NZ_JAVRJR010000009.1 1 78703
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=46126
NZ_JAVRJR010000009.1	RefSeq	region	1	78703	.	+	.	ID=NZ_JAVRJR010000009.1:1..78703;Dbxref=taxon:46126;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST160
NZ_JAVRJR010000009.1	RefSeq	gene	504	962	.	-	.	ID=gene-RM588_RS10080;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=RM588_RS10080;old_locus_tag=RM588_10075
NZ_JAVRJR010000009.1	Protein Homology	CDS	504	962	.	-	0	ID=cds-WP_037575843.1;Parent=gene-RM588_RS10080;Dbxref=GenBank:WP_037575843.1;Name=WP_037575843.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169390.1;locus_tag=RM588_RS10080;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_037575843.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	1047	1997	.	-	.	ID=gene-RM588_RS10085;Name=RM588_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10085;old_locus_tag=RM588_10080
NZ_JAVRJR010000009.1	Protein Homology	CDS	1047	1997	.	-	0	ID=cds-WP_037575840.1;Parent=gene-RM588_RS10085;Dbxref=GenBank:WP_037575840.1;Name=WP_037575840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166485.1;locus_tag=RM588_RS10085;product=phosphoglycerate dehydrogenase;protein_id=WP_037575840.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	2003	2461	.	-	.	ID=gene-RM588_RS10090;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=RM588_RS10090;old_locus_tag=RM588_10085
NZ_JAVRJR010000009.1	Protein Homology	CDS	2003	2461	.	-	0	ID=cds-WP_037575837.1;Parent=gene-RM588_RS10090;Dbxref=GenBank:WP_037575837.1;Name=WP_037575837.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169388.1;locus_tag=RM588_RS10090;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_037575837.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	2542	3837	.	+	.	ID=gene-RM588_RS10095;Name=RM588_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10095;old_locus_tag=RM588_10090
NZ_JAVRJR010000009.1	Protein Homology	CDS	2542	3837	.	+	0	ID=cds-WP_037575834.1;Parent=gene-RM588_RS10095;Dbxref=GenBank:WP_037575834.1;Name=WP_037575834.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=RM588_RS10095;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_037575834.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	4054	5148	.	+	.	ID=gene-RM588_RS10100;Name=RM588_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10100;old_locus_tag=RM588_10095
NZ_JAVRJR010000009.1	Protein Homology	CDS	4054	5148	.	+	0	ID=cds-WP_037575825.1;Parent=gene-RM588_RS10100;Dbxref=GenBank:WP_037575825.1;Name=WP_037575825.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=RM588_RS10100;product=FUSC family protein;protein_id=WP_037575825.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	5227	6804	.	-	.	ID=gene-RM588_RS10105;Name=RM588_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10105;old_locus_tag=RM588_10100
NZ_JAVRJR010000009.1	Protein Homology	CDS	5227	6804	.	-	0	ID=cds-WP_105966044.1;Parent=gene-RM588_RS10105;Dbxref=GenBank:WP_105966044.1;Name=WP_105966044.1;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510022.1;locus_tag=RM588_RS10105;product=FMN-binding glutamate synthase family protein;protein_id=WP_105966044.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	6968	8704	.	-	.	ID=gene-RM588_RS10110;Name=RM588_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10110;old_locus_tag=RM588_10105
NZ_JAVRJR010000009.1	Protein Homology	CDS	6968	8704	.	-	0	ID=cds-WP_311548194.1;Parent=gene-RM588_RS10110;Dbxref=GenBank:WP_311548194.1;Name=WP_311548194.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=RM588_RS10110;product=ABC transporter ATP-binding protein;protein_id=WP_311548194.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	8838	9383	.	-	.	ID=gene-RM588_RS10115;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=RM588_RS10115;old_locus_tag=RM588_10110
NZ_JAVRJR010000009.1	Protein Homology	CDS	8838	9383	.	-	0	ID=cds-WP_037575819.1;Parent=gene-RM588_RS10115;Dbxref=GenBank:WP_037575819.1;Name=WP_037575819.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495215.1;locus_tag=RM588_RS10115;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_037575819.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	9440	10492	.	-	.	ID=gene-RM588_RS10120;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=RM588_RS10120;old_locus_tag=RM588_10115
NZ_JAVRJR010000009.1	Protein Homology	CDS	9440	10492	.	-	0	ID=cds-WP_105963451.1;Parent=gene-RM588_RS10120;Dbxref=GenBank:WP_105963451.1;Name=WP_105963451.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900686.1;locus_tag=RM588_RS10120;product=A/G-specific adenine glycosylase;protein_id=WP_105963451.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	10582	11559	.	+	.	ID=gene-RM588_RS10125;Name=RM588_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10125;old_locus_tag=RM588_10120
NZ_JAVRJR010000009.1	Protein Homology	CDS	10582	11559	.	+	0	ID=cds-WP_107368089.1;Parent=gene-RM588_RS10125;Dbxref=GenBank:WP_107368089.1;Name=WP_107368089.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166478.1;locus_tag=RM588_RS10125;product=metal-dependent hydrolase;protein_id=WP_107368089.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	12025	12840	.	-	.	ID=gene-RM588_RS10130;Name=RM588_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10130;old_locus_tag=RM588_10125
NZ_JAVRJR010000009.1	Protein Homology	CDS	12025	12840	.	-	0	ID=cds-WP_051604990.1;Parent=gene-RM588_RS10130;Dbxref=GenBank:WP_051604990.1;Name=WP_051604990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613499.1;locus_tag=RM588_RS10130;product=teichoic acid translocation permease;protein_id=WP_051604990.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	12849	14375	.	-	.	ID=gene-RM588_RS10135;Name=RM588_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10135;old_locus_tag=RM588_10130
NZ_JAVRJR010000009.1	Protein Homology	CDS	12849	14375	.	-	0	ID=cds-WP_311548195.1;Parent=gene-RM588_RS10135;Dbxref=GenBank:WP_311548195.1;Name=WP_311548195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613498.1;locus_tag=RM588_RS10135;product=ABC transporter ATP-binding protein;protein_id=WP_311548195.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	14391	14702	.	-	.	ID=gene-RM588_RS10140;Name=RM588_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10140;old_locus_tag=RM588_10135
NZ_JAVRJR010000009.1	Protein Homology	CDS	14391	14702	.	-	0	ID=cds-WP_119513342.1;Parent=gene-RM588_RS10140;Dbxref=GenBank:WP_119513342.1;Name=WP_119513342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435810.1;locus_tag=RM588_RS10140;product=YfhH family protein;protein_id=WP_119513342.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	14692	15498	.	-	.	ID=gene-RM588_RS10145;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=RM588_RS10145;old_locus_tag=RM588_10140
NZ_JAVRJR010000009.1	Protein Homology	CDS	14692	15498	.	-	0	ID=cds-WP_107363788.1;Parent=gene-RM588_RS10145;Dbxref=GenBank:WP_107363788.1;Name=WP_107363788.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175220.1;locus_tag=RM588_RS10145;product=recombination regulator RecX;protein_id=WP_107363788.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	15584	16390	.	-	.	ID=gene-RM588_RS10150;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=RM588_RS10150;old_locus_tag=RM588_10145
NZ_JAVRJR010000009.1	Protein Homology	CDS	15584	16390	.	-	0	ID=cds-WP_037575806.1;Parent=gene-RM588_RS10150;Dbxref=GenBank:WP_037575806.1;Name=WP_037575806.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452353.1;locus_tag=RM588_RS10150;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_037575806.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	16558	18303	.	+	.	ID=gene-RM588_RS10155;Name=RM588_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10155;old_locus_tag=RM588_10150
NZ_JAVRJR010000009.1	Protein Homology	CDS	16558	18303	.	+	0	ID=cds-WP_105963444.1;Parent=gene-RM588_RS10155;Dbxref=GenBank:WP_105963444.1;Name=WP_105963444.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062664.1;locus_tag=RM588_RS10155;product=pyruvate oxidase;protein_id=WP_105963444.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	18529	19047	.	-	.	ID=gene-RM588_RS10160;Name=RM588_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10160;old_locus_tag=RM588_10155
NZ_JAVRJR010000009.1	Protein Homology	CDS	18529	19047	.	-	0	ID=cds-WP_037575802.1;Parent=gene-RM588_RS10160;Dbxref=GenBank:WP_037575802.1;Name=WP_037575802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302786.1;locus_tag=RM588_RS10160;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_037575802.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	19118	19279	.	-	.	ID=gene-RM588_RS10165;Name=RM588_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10165;old_locus_tag=RM588_10160
NZ_JAVRJR010000009.1	Protein Homology	CDS	19118	19279	.	-	0	ID=cds-WP_165806293.1;Parent=gene-RM588_RS10165;Dbxref=GenBank:WP_165806293.1;Name=WP_165806293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166471.1;locus_tag=RM588_RS10165;product=SE1561 family protein;protein_id=WP_165806293.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	19389	20525	.	+	.	ID=gene-RM588_RS10170;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=RM588_RS10170;old_locus_tag=RM588_10165
NZ_JAVRJR010000009.1	Protein Homology	CDS	19389	20525	.	+	0	ID=cds-WP_311548196.1;Parent=gene-RM588_RS10170;Dbxref=GenBank:WP_311548196.1;Name=WP_311548196.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425498.1;locus_tag=RM588_RS10170;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_311548196.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	20593	21120	.	-	.	ID=gene-RM588_RS10175;Name=RM588_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10175;old_locus_tag=RM588_10170
NZ_JAVRJR010000009.1	Protein Homology	CDS	20593	21120	.	-	0	ID=cds-WP_103159018.1;Parent=gene-RM588_RS10175;Dbxref=GenBank:WP_103159018.1;Name=WP_103159018.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384028.1;locus_tag=RM588_RS10175;product=acyl-CoA thioesterase;protein_id=WP_103159018.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	21139	22368	.	-	.	ID=gene-RM588_RS10180;Name=RM588_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10180;old_locus_tag=RM588_10175
NZ_JAVRJR010000009.1	Protein Homology	CDS	21139	22368	.	-	0	ID=cds-WP_229717316.1;Parent=gene-RM588_RS10180;Dbxref=GenBank:WP_229717316.1;Name=WP_229717316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469621.1;locus_tag=RM588_RS10180;product=aminopeptidase;protein_id=WP_229717316.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	22399	22608	.	-	.	ID=gene-RM588_RS10185;Name=RM588_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10185;old_locus_tag=RM588_10180
NZ_JAVRJR010000009.1	Protein Homology	CDS	22399	22608	.	-	0	ID=cds-WP_105963442.1;Parent=gene-RM588_RS10185;Dbxref=GenBank:WP_105963442.1;Name=WP_105963442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169369.1;locus_tag=RM588_RS10185;product=DUF1128 domain-containing protein;protein_id=WP_105963442.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	22741	23199	.	+	.	ID=gene-RM588_RS10190;Name=RM588_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10190;old_locus_tag=RM588_10185
NZ_JAVRJR010000009.1	Protein Homology	CDS	22741	23199	.	+	0	ID=cds-WP_037575792.1;Parent=gene-RM588_RS10190;Dbxref=GenBank:WP_037575792.1;Name=WP_037575792.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613486.1;locus_tag=RM588_RS10190;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_037575792.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	23204	23479	.	+	.	ID=gene-RM588_RS10195;Name=RM588_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10195;old_locus_tag=RM588_10190
NZ_JAVRJR010000009.1	Protein Homology	CDS	23204	23479	.	+	0	ID=cds-WP_037575789.1;Parent=gene-RM588_RS10195;Dbxref=GenBank:WP_037575789.1;Name=WP_037575789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500587.1;locus_tag=RM588_RS10195;product=YtxH domain-containing protein;protein_id=WP_037575789.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	23605	24873	.	+	.	ID=gene-RM588_RS10200;Name=RM588_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10200;old_locus_tag=RM588_10195
NZ_JAVRJR010000009.1	Protein Homology	CDS	23605	24873	.	+	0	ID=cds-WP_105963441.1;Parent=gene-RM588_RS10200;Dbxref=GenBank:WP_105963441.1;Name=WP_105963441.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452290.1;locus_tag=RM588_RS10200;product=YihY/virulence factor BrkB family protein;protein_id=WP_105963441.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	24916	25488	.	+	.	ID=gene-RM588_RS10205;Name=RM588_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10205;old_locus_tag=RM588_10200
NZ_JAVRJR010000009.1	Protein Homology	CDS	24916	25488	.	+	0	ID=cds-WP_103159021.1;Parent=gene-RM588_RS10205;Dbxref=GenBank:WP_103159021.1;Name=WP_103159021.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384034.1;locus_tag=RM588_RS10205;product=beta-class carbonic anhydrase;protein_id=WP_103159021.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	25692	26321	.	-	.	ID=gene-RM588_RS10210;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=RM588_RS10210;old_locus_tag=RM588_10205
NZ_JAVRJR010000009.1	Protein Homology	CDS	25692	26321	.	-	0	ID=cds-WP_037575783.1;Parent=gene-RM588_RS10210;Dbxref=GenBank:WP_037575783.1;Name=WP_037575783.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=RM588_RS10210;product=response regulator transcription factor VraR;protein_id=WP_037575783.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	26311	27354	.	-	.	ID=gene-RM588_RS10215;Name=RM588_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10215;old_locus_tag=RM588_10210
NZ_JAVRJR010000009.1	Protein Homology	CDS	26311	27354	.	-	0	ID=cds-WP_037575781.1;Parent=gene-RM588_RS10215;Dbxref=GenBank:WP_037575781.1;Name=WP_037575781.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=RM588_RS10215;product=sensor histidine kinase;protein_id=WP_037575781.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	27351	28052	.	-	.	ID=gene-RM588_RS10220;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=RM588_RS10220;old_locus_tag=RM588_10215
NZ_JAVRJR010000009.1	Protein Homology	CDS	27351	28052	.	-	0	ID=cds-WP_037575779.1;Parent=gene-RM588_RS10220;Dbxref=GenBank:WP_037575779.1;Name=WP_037575779.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149069.1;locus_tag=RM588_RS10220;product=cell wall-active antibiotics response protein VraT;protein_id=WP_037575779.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	28065	28454	.	-	.	ID=gene-RM588_RS10225;Name=RM588_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10225;old_locus_tag=RM588_10220
NZ_JAVRJR010000009.1	GeneMarkS-2+	CDS	28065	28454	.	-	0	ID=cds-WP_037575778.1;Parent=gene-RM588_RS10225;Dbxref=GenBank:WP_037575778.1;Name=WP_037575778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10225;product=hypothetical protein;protein_id=WP_037575778.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	28550	29308	.	-	.	ID=gene-RM588_RS10230;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=RM588_RS10230;old_locus_tag=RM588_10225
NZ_JAVRJR010000009.1	Protein Homology	CDS	28550	29308	.	-	0	ID=cds-WP_037575776.1;Parent=gene-RM588_RS10230;Dbxref=GenBank:WP_037575776.1;Name=WP_037575776.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425510.1;locus_tag=RM588_RS10230;product=type I methionyl aminopeptidase;protein_id=WP_037575776.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	29640	30650	.	+	.	ID=gene-RM588_RS10235;Name=RM588_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10235;old_locus_tag=RM588_10230
NZ_JAVRJR010000009.1	Protein Homology	CDS	29640	30650	.	+	0	ID=cds-WP_103159022.1;Parent=gene-RM588_RS10235;Dbxref=GenBank:WP_103159022.1;Name=WP_103159022.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445470.1;locus_tag=RM588_RS10235;product=FUSC family protein;protein_id=WP_103159022.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	30688	31416	.	-	.	ID=gene-RM588_RS10240;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=RM588_RS10240;old_locus_tag=RM588_10235
NZ_JAVRJR010000009.1	Protein Homology	CDS	30688	31416	.	-	0	ID=cds-WP_103159023.1;Parent=gene-RM588_RS10240;Dbxref=GenBank:WP_103159023.1;Name=WP_103159023.1;Ontology_term=GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0004359,GO:0140282;gbkey=CDS;gene=gatD;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,cobalamin biosynthetic process|0009236||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461344.1;locus_tag=RM588_RS10240;product=lipid II isoglutaminyl synthase subunit GatD;protein_id=WP_103159023.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	31417	32727	.	-	.	ID=gene-RM588_RS10245;Name=murT;gbkey=Gene;gene=murT;gene_biotype=protein_coding;locus_tag=RM588_RS10245;old_locus_tag=RM588_10240
NZ_JAVRJR010000009.1	Protein Homology	CDS	31417	32727	.	-	0	ID=cds-WP_105963440.1;Parent=gene-RM588_RS10245;Dbxref=GenBank:WP_105963440.1;Name=WP_105963440.1;Ontology_term=GO:0008360,GO:0009252,GO:0005524,GO:0008270,GO:0140282;gbkey=CDS;gene=murT;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,carbon-nitrogen ligase activity on lipid II|0140282||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425517.1;locus_tag=RM588_RS10245;product=lipid II isoglutaminyl synthase subunit MurT;protein_id=WP_105963440.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	32877	33380	.	+	.	ID=gene-RM588_RS10250;Name=RM588_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10250;old_locus_tag=RM588_10245
NZ_JAVRJR010000009.1	Protein Homology	CDS	32877	33380	.	+	0	ID=cds-WP_037575770.1;Parent=gene-RM588_RS10250;Dbxref=GenBank:WP_037575770.1;Name=WP_037575770.1;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302773.1;locus_tag=RM588_RS10250;product=ferritin;protein_id=WP_037575770.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	33477	34037	.	+	.	ID=gene-RM588_RS10255;Name=RM588_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10255;old_locus_tag=RM588_10250
NZ_JAVRJR010000009.1	Protein Homology	CDS	33477	34037	.	+	0	ID=cds-WP_037575768.1;Parent=gene-RM588_RS10255;Dbxref=GenBank:WP_037575768.1;Name=WP_037575768.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613473.1;locus_tag=RM588_RS10255;product=3'-5' exonuclease;protein_id=WP_037575768.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	34032	35102	.	-	.	ID=gene-RM588_RS10260;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=RM588_RS10260;old_locus_tag=RM588_10255
NZ_JAVRJR010000009.1	Protein Homology	CDS	34032	35102	.	-	0	ID=cds-WP_311548197.1;Parent=gene-RM588_RS10260;Dbxref=GenBank:WP_311548197.1;Name=WP_311548197.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=RM588_RS10260;product=DNA polymerase IV;protein_id=WP_311548197.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	35349	35879	.	-	.	ID=gene-RM588_RS10265;Name=RM588_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10265;old_locus_tag=RM588_10260
NZ_JAVRJR010000009.1	Protein Homology	CDS	35349	35879	.	-	0	ID=cds-WP_105996931.1;Parent=gene-RM588_RS10265;Dbxref=GenBank:WP_105996931.1;Name=WP_105996931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023096.7;locus_tag=RM588_RS10265;product=DUF3267 domain-containing protein;protein_id=WP_105996931.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	35953	37281	.	-	.	ID=gene-RM588_RS10270;Name=RM588_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10270;old_locus_tag=RM588_10265
NZ_JAVRJR010000009.1	Protein Homology	CDS	35953	37281	.	-	0	ID=cds-WP_107367256.1;Parent=gene-RM588_RS10270;Dbxref=GenBank:WP_107367256.1;Name=WP_107367256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012363.7;locus_tag=RM588_RS10270;product=carboxylesterase family protein;protein_id=WP_107367256.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	37296	38660	.	-	.	ID=gene-RM588_RS10275;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=RM588_RS10275;old_locus_tag=RM588_10270
NZ_JAVRJR010000009.1	Protein Homology	CDS	37296	38660	.	-	0	ID=cds-WP_311548198.1;Parent=gene-RM588_RS10275;Dbxref=GenBank:WP_311548198.1;Name=WP_311548198.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363302.1;locus_tag=RM588_RS10275;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_311548198.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	38751	39683	.	-	.	ID=gene-RM588_RS10280;Name=RM588_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10280;old_locus_tag=RM588_10275
NZ_JAVRJR010000009.1	Protein Homology	CDS	38751	39683	.	-	0	ID=cds-WP_103159027.1;Parent=gene-RM588_RS10280;Dbxref=GenBank:WP_103159027.1;Name=WP_103159027.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166450.1;locus_tag=RM588_RS10280;product=diacylglycerol kinase;protein_id=WP_103159027.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	39974	41401	.	-	.	ID=gene-RM588_RS10285;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=RM588_RS10285;old_locus_tag=RM588_10280
NZ_JAVRJR010000009.1	Protein Homology	CDS	39974	41401	.	-	0	ID=cds-WP_037575761.1;Parent=gene-RM588_RS10285;Dbxref=GenBank:WP_037575761.1;Name=WP_037575761.1;Ontology_term=GO:0006412,GO:0070681,GO:0005524,GO:0050566,GO:0050567;gbkey=CDS;gene=gatB;go_function=ATP binding|0005524||IEA,asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity|0050566||IEA,glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutaminyl-tRNAGln biosynthesis via transamidation|0070681||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=RM588_RS10285;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_037575761.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	41415	42875	.	-	.	ID=gene-RM588_RS10290;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=RM588_RS10290;old_locus_tag=RM588_10285
NZ_JAVRJR010000009.1	Protein Homology	CDS	41415	42875	.	-	0	ID=cds-WP_037575760.1;Parent=gene-RM588_RS10290;Dbxref=GenBank:WP_037575760.1;Name=WP_037575760.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=RM588_RS10290;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_037575760.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	42877	43179	.	-	.	ID=gene-RM588_RS10295;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=RM588_RS10295;old_locus_tag=RM588_10290
NZ_JAVRJR010000009.1	Protein Homology	CDS	42877	43179	.	-	0	ID=cds-WP_037575759.1;Parent=gene-RM588_RS10295;Dbxref=GenBank:WP_037575759.1;Name=WP_037575759.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170162.1;locus_tag=RM588_RS10295;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_037575759.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	43756	45300	.	+	.	ID=gene-RM588_RS10300;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=RM588_RS10300;old_locus_tag=RM588_10295
NZ_JAVRJR010000009.1	Protein Homology	CDS	43756	45300	.	+	0	ID=cds-WP_103159495.1;Parent=gene-RM588_RS10300;Dbxref=GenBank:WP_103159495.1;Name=WP_103159495.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509885.1;locus_tag=RM588_RS10300;product=sodium/proline symporter PutP;protein_id=WP_103159495.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	45400	46593	.	-	.	ID=gene-RM588_RS10305;Name=RM588_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10305;old_locus_tag=RM588_10300
NZ_JAVRJR010000009.1	Protein Homology	CDS	45400	46593	.	-	0	ID=cds-WP_136732219.1;Parent=gene-RM588_RS10305;Dbxref=GenBank:WP_136732219.1;Name=WP_136732219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499947.1;locus_tag=RM588_RS10305;product=CamS family sex pheromone protein;protein_id=WP_136732219.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	46605	48608	.	-	.	ID=gene-RM588_RS10310;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=RM588_RS10310;old_locus_tag=RM588_10305
NZ_JAVRJR010000009.1	Protein Homology	CDS	46605	48608	.	-	0	ID=cds-WP_103159496.1;Parent=gene-RM588_RS10310;Dbxref=GenBank:WP_103159496.1;Name=WP_103159496.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477944.1;locus_tag=RM588_RS10310;product=NAD-dependent DNA ligase LigA;protein_id=WP_103159496.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	48609	50798	.	-	.	ID=gene-RM588_RS10315;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=RM588_RS10315;old_locus_tag=RM588_10310
NZ_JAVRJR010000009.1	Protein Homology	CDS	48609	50798	.	-	0	ID=cds-WP_311541128.1;Parent=gene-RM588_RS10315;Dbxref=GenBank:WP_311541128.1;Name=WP_311541128.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=RM588_RS10315;product=DNA helicase PcrA;protein_id=WP_311541128.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	50798	51487	.	-	.	ID=gene-RM588_RS10320;Name=pcrB;gbkey=Gene;gene=pcrB;gene_biotype=protein_coding;locus_tag=RM588_RS10320;old_locus_tag=RM588_10315
NZ_JAVRJR010000009.1	Protein Homology	CDS	50798	51487	.	-	0	ID=cds-WP_037575743.1;Parent=gene-RM588_RS10320;Dbxref=GenBank:WP_037575743.1;Name=WP_037575743.1;Ontology_term=GO:0120536;gbkey=CDS;gene=pcrB;go_function=heptaprenylglyceryl phosphate synthase activity|0120536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169341.1;locus_tag=RM588_RS10320;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_037575743.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	51647	51949	.	-	.	ID=gene-RM588_RS10325;Name=RM588_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10325;old_locus_tag=RM588_10320
NZ_JAVRJR010000009.1	Protein Homology	CDS	51647	51949	.	-	0	ID=cds-WP_037575741.1;Parent=gene-RM588_RS10325;Dbxref=GenBank:WP_037575741.1;Name=WP_037575741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500616.1;locus_tag=RM588_RS10325;product=YerC/YecD family TrpR-related protein;protein_id=WP_037575741.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	52018	53313	.	-	.	ID=gene-RM588_RS10330;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=RM588_RS10330;old_locus_tag=RM588_10325
NZ_JAVRJR010000009.1	Protein Homology	CDS	52018	53313	.	-	0	ID=cds-WP_037575739.1;Parent=gene-RM588_RS10330;Dbxref=GenBank:WP_037575739.1;Name=WP_037575739.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500617.1;locus_tag=RM588_RS10330;product=adenylosuccinate lyase;protein_id=WP_037575739.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	53578	53757	.	-	.	ID=gene-RM588_RS10335;Name=RM588_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10335;old_locus_tag=RM588_10330
NZ_JAVRJR010000009.1	Protein Homology	CDS	53578	53757	.	-	0	ID=cds-WP_037575736.1;Parent=gene-RM588_RS10335;Dbxref=GenBank:WP_037575736.1;Name=WP_037575736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384058.1;locus_tag=RM588_RS10335;product=NETI motif-containing protein;protein_id=WP_037575736.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	53747	54316	.	-	.	ID=gene-RM588_RS10340;Name=RM588_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10340;old_locus_tag=RM588_10335
NZ_JAVRJR010000009.1	Protein Homology	CDS	53747	54316	.	-	0	ID=cds-WP_311548199.1;Parent=gene-RM588_RS10340;Dbxref=GenBank:WP_311548199.1;Name=WP_311548199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169337.1;locus_tag=RM588_RS10340;product=DUF2179 domain-containing protein;protein_id=WP_311548199.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	54385	55206	.	-	.	ID=gene-RM588_RS10345;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=RM588_RS10345;old_locus_tag=RM588_10340
NZ_JAVRJR010000009.1	Protein Homology	CDS	54385	55206	.	-	0	ID=cds-WP_311541130.1;Parent=gene-RM588_RS10345;Dbxref=GenBank:WP_311541130.1;Name=WP_311541130.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275346.1;locus_tag=RM588_RS10345;product=NAD(+) synthase;protein_id=WP_311541130.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	55199	56668	.	-	.	ID=gene-RM588_RS10350;Name=RM588_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10350;old_locus_tag=RM588_10345
NZ_JAVRJR010000009.1	Protein Homology	CDS	55199	56668	.	-	0	ID=cds-WP_037575729.1;Parent=gene-RM588_RS10350;Dbxref=GenBank:WP_037575729.1;Name=WP_037575729.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=RM588_RS10350;product=nicotinate phosphoribosyltransferase;protein_id=WP_037575729.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	56829	57899	.	+	.	ID=gene-RM588_RS10355;Name=RM588_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10355;old_locus_tag=RM588_10350
NZ_JAVRJR010000009.1	Protein Homology	CDS	56829	57899	.	+	0	ID=cds-WP_311541131.1;Parent=gene-RM588_RS10355;Dbxref=GenBank:WP_311541131.1;Name=WP_311541131.1;Ontology_term=GO:0006809,GO:0004517;gbkey=CDS;go_function=nitric-oxide synthase activity|0004517||IEA;go_process=nitric oxide biosynthetic process|0006809||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169334.1;locus_tag=RM588_RS10355;product=nitric oxide synthase oxygenase;protein_id=WP_311541131.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	57943	58734	.	+	.	ID=gene-RM588_RS10360;Name=RM588_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10360;old_locus_tag=RM588_10355
NZ_JAVRJR010000009.1	Protein Homology	CDS	57943	58734	.	+	0	ID=cds-WP_037575723.1;Parent=gene-RM588_RS10360;Dbxref=GenBank:WP_037575723.1;Name=WP_037575723.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169333.1;locus_tag=RM588_RS10360;product=prephenate dehydratase;protein_id=WP_037575723.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	58972	60075	.	-	.	ID=gene-RM588_RS10365;Name=RM588_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10365;old_locus_tag=RM588_10360
NZ_JAVRJR010000009.1	Protein Homology	CDS	58972	60075	.	-	0	ID=cds-WP_105963436.1;Parent=gene-RM588_RS10365;Dbxref=GenBank:WP_105963436.1;Name=WP_105963436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425542.1;locus_tag=RM588_RS10365;product=glycosyl hydrolase family 28-related protein;protein_id=WP_105963436.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	60158	60709	.	+	.	ID=gene-RM588_RS10370;Name=RM588_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10370;old_locus_tag=RM588_10365
NZ_JAVRJR010000009.1	Protein Homology	CDS	60158	60709	.	+	0	ID=cds-WP_037575718.1;Parent=gene-RM588_RS10370;Dbxref=GenBank:WP_037575718.1;Name=WP_037575718.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169331.1;locus_tag=RM588_RS10370;product=cysteine hydrolase family protein;protein_id=WP_037575718.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	60772	61695	.	+	.	ID=gene-RM588_RS10375;Name=RM588_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10375;old_locus_tag=RM588_10370
NZ_JAVRJR010000009.1	Protein Homology	CDS	60772	61695	.	+	0	ID=cds-WP_037575715.1;Parent=gene-RM588_RS10375;Dbxref=GenBank:WP_037575715.1;Name=WP_037575715.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019169330.1;locus_tag=RM588_RS10375;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_037575715.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	61715	62002	.	+	.	ID=gene-RM588_RS10380;Name=RM588_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10380;old_locus_tag=RM588_10375
NZ_JAVRJR010000009.1	Protein Homology	CDS	61715	62002	.	+	0	ID=cds-WP_037575714.1;Parent=gene-RM588_RS10380;Dbxref=GenBank:WP_037575714.1;Name=WP_037575714.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384068.1;locus_tag=RM588_RS10380;product=GNAT family N-acetyltransferase;protein_id=WP_037575714.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	62202	63584	.	+	.	ID=gene-RM588_RS10385;Name=RM588_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10385;old_locus_tag=RM588_10380
NZ_JAVRJR010000009.1	Protein Homology	CDS	62202	63584	.	+	0	ID=cds-WP_037575712.1;Parent=gene-RM588_RS10385;Dbxref=GenBank:WP_037575712.1;Name=WP_037575712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900735.1;locus_tag=RM588_RS10385;product=aldehyde dehydrogenase;protein_id=WP_037575712.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	63880	64920	.	-	.	ID=gene-RM588_RS10390;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=RM588_RS10390;old_locus_tag=RM588_10385
NZ_JAVRJR010000009.1	Protein Homology	CDS	63880	64920	.	-	0	ID=cds-WP_311541133.1;Parent=gene-RM588_RS10390;Dbxref=GenBank:WP_311541133.1;Name=WP_311541133.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302748.1;locus_tag=RM588_RS10390;product=6-phosphogluconolactonase;protein_id=WP_311541133.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	64993	65562	.	-	.	ID=gene-RM588_RS10395;Name=RM588_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10395;old_locus_tag=RM588_10390
NZ_JAVRJR010000009.1	GeneMarkS-2+	CDS	64993	65562	.	-	0	ID=cds-WP_037575707.1;Parent=gene-RM588_RS10395;Dbxref=GenBank:WP_037575707.1;Name=WP_037575707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM588_RS10395;product=hypothetical protein;protein_id=WP_037575707.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	65692	65865	.	-	.	ID=gene-RM588_RS10400;Name=RM588_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10400;old_locus_tag=RM588_10395
NZ_JAVRJR010000009.1	Protein Homology	CDS	65692	65865	.	-	0	ID=cds-WP_165806299.1;Parent=gene-RM588_RS10400;Dbxref=GenBank:WP_165806299.1;Name=WP_165806299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461390.1;locus_tag=RM588_RS10400;product=hypothetical protein;protein_id=WP_165806299.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	66037	66420	.	+	.	ID=gene-RM588_RS10405;Name=RM588_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10405;old_locus_tag=RM588_10400
NZ_JAVRJR010000009.1	Protein Homology	CDS	66037	66420	.	+	0	ID=cds-WP_037575705.1;Parent=gene-RM588_RS10405;Dbxref=GenBank:WP_037575705.1;Name=WP_037575705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613436.1;locus_tag=RM588_RS10405;product=hypothetical protein;protein_id=WP_037575705.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	66698	67738	.	+	.	ID=gene-RM588_RS10410;Name=RM588_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10410;old_locus_tag=RM588_10405
NZ_JAVRJR010000009.1	Protein Homology	CDS	66698	67738	.	+	0	ID=cds-WP_311541134.1;Parent=gene-RM588_RS10410;Dbxref=GenBank:WP_311541134.1;Name=WP_311541134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188079.1;locus_tag=RM588_RS10410;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WP_311541134.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	67789	68631	.	-	.	ID=gene-RM588_RS10415;Name=RM588_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10415;old_locus_tag=RM588_10410
NZ_JAVRJR010000009.1	Protein Homology	CDS	67789	68631	.	-	0	ID=cds-WP_037575702.1;Parent=gene-RM588_RS10415;Dbxref=GenBank:WP_037575702.1;Name=WP_037575702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024743.7;locus_tag=RM588_RS10415;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_037575702.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	68628	69191	.	-	.	ID=gene-RM588_RS10420;Name=RM588_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10420;old_locus_tag=RM588_10415
NZ_JAVRJR010000009.1	Protein Homology	CDS	68628	69191	.	-	0	ID=cds-WP_037575700.1;Parent=gene-RM588_RS10420;Dbxref=GenBank:WP_037575700.1;Name=WP_037575700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613433.1;locus_tag=RM588_RS10420;product=HAAS signaling domain-containing protein;protein_id=WP_037575700.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	69377	69931	.	+	.	ID=gene-RM588_RS10425;Name=RM588_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10425;old_locus_tag=RM588_10420
NZ_JAVRJR010000009.1	Protein Homology	CDS	69377	69931	.	+	0	ID=cds-WP_037575698.1;Parent=gene-RM588_RS10425;Dbxref=GenBank:WP_037575698.1;Name=WP_037575698.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170608.1;locus_tag=RM588_RS10425;product=thioredoxin family protein;protein_id=WP_037575698.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	70129	70542	.	-	.	ID=gene-RM588_RS10430;Name=RM588_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10430;old_locus_tag=RM588_10425
NZ_JAVRJR010000009.1	Protein Homology	CDS	70129	70542	.	-	0	ID=cds-WP_311541135.1;Parent=gene-RM588_RS10430;Dbxref=GenBank:WP_311541135.1;Name=WP_311541135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=RM588_RS10430;product=DUF2188 domain-containing protein;protein_id=WP_311541135.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	70583	71944	.	-	.	ID=gene-RM588_RS10435;Name=RM588_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10435;old_locus_tag=RM588_10430
NZ_JAVRJR010000009.1	Protein Homology	CDS	70583	71944	.	-	0	ID=cds-WP_103158755.1;Parent=gene-RM588_RS10435;Dbxref=GenBank:WP_103158755.1;Name=WP_103158755.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495083.1;locus_tag=RM588_RS10435;product=gluconate:H+ symporter;protein_id=WP_103158755.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	71959	73491	.	-	.	ID=gene-RM588_RS10440;Name=RM588_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10440;old_locus_tag=RM588_10435
NZ_JAVRJR010000009.1	Protein Homology	CDS	71959	73491	.	-	0	ID=cds-WP_311541136.1;Parent=gene-RM588_RS10440;Dbxref=GenBank:WP_311541136.1;Name=WP_311541136.1;Ontology_term=GO:0016310,GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=phosphorylation|0016310||IEA,obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425556.1;locus_tag=RM588_RS10440;product=gluconokinase;protein_id=WP_311541136.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	73514	74188	.	-	.	ID=gene-RM588_RS10445;Name=RM588_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10445;old_locus_tag=RM588_10440
NZ_JAVRJR010000009.1	Protein Homology	CDS	73514	74188	.	-	0	ID=cds-WP_037575693.1;Parent=gene-RM588_RS10445;Dbxref=GenBank:WP_037575693.1;Name=WP_037575693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613429.1;locus_tag=RM588_RS10445;product=GntR family transcriptional regulator;protein_id=WP_037575693.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	74369	75097	.	-	.	ID=gene-RM588_RS10450;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=RM588_RS10450;old_locus_tag=RM588_10445
NZ_JAVRJR010000009.1	Protein Homology	CDS	74369	75097	.	-	0	ID=cds-WP_037575691.1;Parent=gene-RM588_RS10450;Dbxref=GenBank:WP_037575691.1;Name=WP_037575691.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425558.1;locus_tag=RM588_RS10450;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_037575691.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	75097	75969	.	-	.	ID=gene-RM588_RS10455;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=RM588_RS10455;old_locus_tag=RM588_10450
NZ_JAVRJR010000009.1	Protein Homology	CDS	75097	75969	.	-	0	ID=cds-WP_037575689.1;Parent=gene-RM588_RS10455;Dbxref=GenBank:WP_037575689.1;Name=WP_037575689.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466134.1;locus_tag=RM588_RS10455;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_037575689.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	76665	76961	.	-	.	ID=gene-RM588_RS10460;Name=RM588_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10460;old_locus_tag=RM588_10455
NZ_JAVRJR010000009.1	Protein Homology	CDS	76665	76961	.	-	0	ID=cds-WP_258026739.1;Parent=gene-RM588_RS10460;Dbxref=GenBank:WP_258026739.1;Name=WP_258026739.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469536.1;locus_tag=RM588_RS10460;product=GntR family transcriptional regulator;protein_id=WP_258026739.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	77261	77437	.	-	.	ID=gene-RM588_RS10465;Name=RM588_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10465;old_locus_tag=RM588_10460
NZ_JAVRJR010000009.1	Protein Homology	CDS	77261	77437	.	-	0	ID=cds-WP_037575851.1;Parent=gene-RM588_RS10465;Dbxref=GenBank:WP_037575851.1;Name=WP_037575851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385021.1;locus_tag=RM588_RS10465;product=SE1626 family protein;protein_id=WP_037575851.1;transl_table=11
NZ_JAVRJR010000009.1	RefSeq	gene	77597	78703	.	+	.	ID=gene-RM588_RS10470;Name=RM588_RS10470;end_range=78703,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM588_RS10470;old_locus_tag=RM588_10465;partial=true
NZ_JAVRJR010000009.1	Protein Homology	CDS	77597	78703	.	+	0	ID=cds-WP_311541137.1;Parent=gene-RM588_RS10470;Dbxref=GenBank:WP_311541137.1;Name=WP_311541137.1;Ontology_term=GO:0009058,GO:0030170;end_range=78703,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068529.1;locus_tag=RM588_RS10470;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311541137.1;transl_table=11
###