##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM798992v1 #!genome-build-accession NCBI_Assembly:GCF_007989925.1 #!annotation-date 04/16/2025 08:26:06 #!annotation-source NCBI RefSeq GCF_007989925.1-RS_2025_04_16 ##sequence-region NZ_QFYX01000010.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000010.1 RefSeq region 1 526 . + . ID=NZ_QFYX01000010.1:1..526;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000010.1 RefSeq pseudogene 1 261 . - . ID=gene-DKM08_RS21275;Name=DKM08_RS21275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21275;old_locus_tag=DKM08_21265;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000010.1 Protein Homology CDS 1 261 . - 0 ID=cds-DKM08_RS21275;Parent=gene-DKM08_RS21275;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036997.6;locus_tag=DKM08_RS21275;partial=true;product=primosome assembly protein PriA;pseudo=true;start_range=.,1;transl_table=11 NZ_QFYX01000010.1 RefSeq gene 309 526 . - . ID=gene-DKM08_RS21280;Name=DKM08_RS21280;end_range=526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21280;old_locus_tag=DKM08_21270;partial=true NZ_QFYX01000010.1 Protein Homology CDS 309 526 . - 2 ID=cds-WP_186807145.1;Parent=gene-DKM08_RS21280;Dbxref=GenBank:WP_186807145.1;Name=WP_186807145.1;Ontology_term=GO:0006556,GO:0004478;end_range=526,.;gbkey=CDS;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016691682.1;locus_tag=DKM08_RS21280;partial=true;product=methionine adenosyltransferase domain-containing protein;protein_id=WP_186807145.1;transl_table=11 ##sequence-region NZ_QFYX01000011.1 1 522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000011.1 RefSeq region 1 522 . + . ID=NZ_QFYX01000011.1:1..522;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000011.1 RefSeq pseudogene 1 386 . + . ID=gene-DKM08_RS21285;Name=DKM08_RS21285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21285;old_locus_tag=DKM08_21275;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000011.1 Protein Homology CDS 1 386 . + 2 ID=cds-DKM08_RS21285;Parent=gene-DKM08_RS21285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732475.1;locus_tag=DKM08_RS21285;partial=true;product=sialidase family protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000012.1 1 486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000012.1 RefSeq region 1 486 . + . ID=NZ_QFYX01000012.1:1..486;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000012.1 RefSeq gene 1 416 . + . ID=gene-DKM08_RS21290;Name=DKM08_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21290;old_locus_tag=DKM08_21280;partial=true;start_range=.,1 NZ_QFYX01000012.1 Protein Homology CDS 1 416 . + 2 ID=cds-WP_215727384.1;Parent=gene-DKM08_RS21290;Dbxref=GenBank:WP_215727384.1;Name=WP_215727384.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: protein motif:HMM:NF014871.6;locus_tag=DKM08_RS21290;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_215727384.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000013.1 1 484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000013.1 RefSeq region 1 484 . + . ID=NZ_QFYX01000013.1:1..484;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000013.1 RefSeq gene 6 484 . + . ID=gene-DKM08_RS21295;Name=DKM08_RS21295;end_range=484,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21295;old_locus_tag=DKM08_21285;partial=true NZ_QFYX01000013.1 Protein Homology CDS 6 484 . + 0 ID=cds-WP_237085738.1;Parent=gene-DKM08_RS21295;Dbxref=GenBank:WP_237085738.1;Name=WP_237085738.1;end_range=484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006286649.1;locus_tag=DKM08_RS21295;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_237085738.1;transl_table=11 ##sequence-region NZ_QFYX01000014.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000014.1 RefSeq region 1 482 . + . ID=NZ_QFYX01000014.1:1..482;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 ##sequence-region NZ_QFYX01000015.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000015.1 RefSeq region 1 476 . + . ID=NZ_QFYX01000015.1:1..476;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000015.1 RefSeq gene 1 476 . - . ID=gene-DKM08_RS21300;Name=DKM08_RS21300;end_range=476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21300;old_locus_tag=DKM08_21290;partial=true;start_range=.,1 NZ_QFYX01000015.1 GeneMarkS-2+ CDS 1 476 . - 1 ID=cds-WP_215727385.1;Parent=gene-DKM08_RS21300;Dbxref=GenBank:WP_215727385.1;Name=WP_215727385.1;end_range=476,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21300;partial=true;product=hypothetical protein;protein_id=WP_215727385.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000016.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000016.1 RefSeq region 1 474 . + . ID=NZ_QFYX01000016.1:1..474;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000016.1 RefSeq gene 1 412 . - . ID=gene-DKM08_RS21305;Name=DKM08_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21305;old_locus_tag=DKM08_21295;partial=true;start_range=.,1 NZ_QFYX01000016.1 Protein Homology CDS 1 412 . - 0 ID=cds-WP_215727386.1;Parent=gene-DKM08_RS21305;Dbxref=GenBank:WP_215727386.1;Name=WP_215727386.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=DKM08_RS21305;partial=true;product=glycosyltransferase;protein_id=WP_215727386.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000017.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000017.1 RefSeq region 1 474 . + . ID=NZ_QFYX01000017.1:1..474;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000017.1 RefSeq pseudogene 1 198 . + . ID=gene-DKM08_RS21310;Name=DKM08_RS21310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21310;old_locus_tag=DKM08_21300;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000017.1 Protein Homology CDS 1 198 . + 0 ID=cds-DKM08_RS21310;Parent=gene-DKM08_RS21310;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040257.5;locus_tag=DKM08_RS21310;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_QFYX01000017.1 RefSeq gene 210 474 . + . ID=gene-DKM08_RS21315;Name=ortA;end_range=474,.;gbkey=Gene;gene=ortA;gene_biotype=protein_coding;locus_tag=DKM08_RS21315;old_locus_tag=DKM08_21305;partial=true NZ_QFYX01000017.1 Protein Homology CDS 210 474 . + 0 ID=cds-WP_147020956.1;Parent=gene-DKM08_RS21315;Dbxref=GenBank:WP_147020956.1;Name=WP_147020956.1;end_range=474,.;gbkey=CDS;gene=ortA;inference=COORDINATES: protein motif:HMM:NF046171.2;locus_tag=DKM08_RS21315;partial=true;product=2-amino-4-oxopentanoate thiolase subunit OrtA;protein_id=WP_147020956.1;transl_table=11 ##sequence-region NZ_QFYX01000018.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000018.1 RefSeq region 1 474 . + . ID=NZ_QFYX01000018.1:1..474;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000018.1 RefSeq gene 1 474 . + . ID=gene-DKM08_RS21320;Name=ccsA;end_range=474,.;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=DKM08_RS21320;old_locus_tag=DKM08_21310;partial=true;start_range=.,1 NZ_QFYX01000018.1 Protein Homology CDS 1 474 . + 0 ID=cds-WP_186807147.1;Parent=gene-DKM08_RS21320;Dbxref=GenBank:WP_186807147.1;Name=WP_186807147.1;Ontology_term=GO:0017004,GO:0020037;end_range=474,.;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: protein motif:HMM:NF013725.6;locus_tag=DKM08_RS21320;partial=true;product=cytochrome c biogenesis protein CcsA;protein_id=WP_186807147.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000019.1 1 473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000019.1 RefSeq region 1 473 . + . ID=NZ_QFYX01000019.1:1..473;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000019.1 RefSeq gene 130 411 . - . ID=gene-DKM08_RS21325;Name=DKM08_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21325;old_locus_tag=DKM08_21315 NZ_QFYX01000019.1 Protein Homology CDS 130 411 . - 0 ID=cds-WP_147020959.1;Parent=gene-DKM08_RS21325;Dbxref=GenBank:WP_147020959.1;Name=WP_147020959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002597.0;locus_tag=DKM08_RS21325;product=cell division protein CrgA;protein_id=WP_147020959.1;transl_table=11 ##sequence-region NZ_QFYX01000001.1 1 2857927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000001.1 RefSeq region 1 2857927 . + . ID=NZ_QFYX01000001.1:1..2857927;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000001.1 RefSeq gene 1 425 . - . ID=gene-DKM08_RS00005;Name=DKM08_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00005;old_locus_tag=DKM08_00005;partial=true;start_range=.,1 NZ_QFYX01000001.1 Protein Homology CDS 1 425 . - 0 ID=cds-WP_147020863.1;Parent=gene-DKM08_RS00005;Dbxref=GenBank:WP_147020863.1;Name=WP_147020863.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=DKM08_RS00005;partial=true;product=PE family protein;protein_id=WP_147020863.1;start_range=.,1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 689 3322 . - . ID=gene-DKM08_RS00010;Name=DKM08_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00010;old_locus_tag=DKM08_00010 NZ_QFYX01000001.1 Protein Homology CDS 689 3322 . - 0 ID=cds-WP_010950372.1;Parent=gene-DKM08_RS00010;Dbxref=GenBank:WP_010950372.1;Name=WP_010950372.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177751.1;locus_tag=DKM08_RS00010;product=PE family protein;protein_id=WP_010950372.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 3572 6067 . - . ID=gene-DKM08_RS00015;Name=DKM08_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00015;old_locus_tag=DKM08_00015 NZ_QFYX01000001.1 Protein Homology CDS 3572 6067 . - 0 ID=cds-WP_147020864.1;Parent=gene-DKM08_RS00015;Dbxref=GenBank:WP_147020864.1;Name=WP_147020864.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177708.1;locus_tag=DKM08_RS00015;product=PE family protein;protein_id=WP_147020864.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 6358 7968 . + . ID=gene-DKM08_RS00025;Name=DKM08_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00025;old_locus_tag=DKM08_00025 NZ_QFYX01000001.1 Protein Homology CDS 6358 7968 . + 0 ID=cds-WP_010950374.1;Parent=gene-DKM08_RS00025;Dbxref=GenBank:WP_010950374.1;Name=WP_010950374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177709.1;locus_tag=DKM08_RS00025;product=PPE family protein;protein_id=WP_010950374.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 7992 8900 . + . ID=gene-DKM08_RS00030;Name=DKM08_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00030;old_locus_tag=DKM08_00030 NZ_QFYX01000001.1 Protein Homology CDS 7992 8900 . + 0 ID=cds-WP_003401448.1;Parent=gene-DKM08_RS00030;Dbxref=GenBank:WP_003401448.1;Name=WP_003401448.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214795.1;locus_tag=DKM08_RS00030;product=class I SAM-dependent methyltransferase;protein_id=WP_003401448.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 9157 11019 . + . ID=gene-DKM08_RS00035;Name=eccA3;gbkey=Gene;gene=eccA3;gene_biotype=protein_coding;locus_tag=DKM08_RS00035;old_locus_tag=DKM08_00035 NZ_QFYX01000001.1 Protein Homology CDS 9157 11019 . + 0 ID=cds-WP_003911145.1;Parent=gene-DKM08_RS00035;Dbxref=GenBank:WP_003911145.1;Name=WP_003911145.1;gbkey=CDS;gene=eccA3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911145.1;locus_tag=DKM08_RS00035;product=type VII secretion system ESX-3 AAA family ATPase EccA3;protein_id=WP_003911145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 11016 12632 . + . ID=gene-DKM08_RS00040;Name=eccB3;gbkey=Gene;gene=eccB3;gene_biotype=protein_coding;locus_tag=DKM08_RS00040;old_locus_tag=DKM08_00040 NZ_QFYX01000001.1 Protein Homology CDS 11016 12632 . + 0 ID=cds-WP_023349437.1;Parent=gene-DKM08_RS00040;Dbxref=GenBank:WP_023349437.1;Name=WP_023349437.1;gbkey=CDS;gene=eccB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214797.1;locus_tag=DKM08_RS00040;product=type VII secretion system ESX-3 subunit EccB3;protein_id=WP_023349437.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 12629 16621 . + . ID=gene-DKM08_RS00045;Name=eccC3;gbkey=Gene;gene=eccC3;gene_biotype=protein_coding;locus_tag=DKM08_RS00045;old_locus_tag=DKM08_00045 NZ_QFYX01000001.1 Protein Homology CDS 12629 16621 . + 0 ID=cds-WP_003401478.1;Parent=gene-DKM08_RS00045;Dbxref=GenBank:WP_003401478.1;Name=WP_003401478.1;gbkey=CDS;gene=eccC3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214798.1;locus_tag=DKM08_RS00045;product=type VII secretion system ESX-3 FtsK/SpoIIIE family ATPase EccC3;protein_id=WP_003401478.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 16618 16926 . + . ID=gene-DKM08_RS00050;Name=DKM08_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00050;old_locus_tag=DKM08_00050 NZ_QFYX01000001.1 Protein Homology CDS 16618 16926 . + 0 ID=cds-WP_003401485.1;Parent=gene-DKM08_RS00050;Dbxref=GenBank:WP_003401485.1;Name=WP_003401485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177710.1;locus_tag=DKM08_RS00050;product=type VII secretion system ESX-3 target PE5;protein_id=WP_003401485.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 16929 18470 . + . ID=gene-DKM08_RS00055;Name=DKM08_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00055;old_locus_tag=DKM08_00055 NZ_QFYX01000001.1 Protein Homology CDS 16929 18470 . + 0 ID=cds-WP_003401488.1;Parent=gene-DKM08_RS00055;Dbxref=GenBank:WP_003401488.1;Name=WP_003401488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177711.1;locus_tag=DKM08_RS00055;product=type VII secretion system ESX-3 target PPE4;protein_id=WP_003401488.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 18519 18812 . + . ID=gene-DKM08_RS00060;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=DKM08_RS00060;old_locus_tag=DKM08_00060 NZ_QFYX01000001.1 Protein Homology CDS 18519 18812 . + 0 ID=cds-WP_003401503.1;Parent=gene-DKM08_RS00060;Dbxref=GenBank:WP_003401503.1;Name=WP_003401503.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214801.1;locus_tag=DKM08_RS00060;product=type VII secretion system protein EsxG;protein_id=WP_003401503.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 18842 19132 . + . ID=gene-DKM08_RS00065;Name=esxH;gbkey=Gene;gene=esxH;gene_biotype=protein_coding;locus_tag=DKM08_RS00065;old_locus_tag=DKM08_00065 NZ_QFYX01000001.1 Protein Homology CDS 18842 19132 . + 0 ID=cds-WP_003401514.1;Parent=gene-DKM08_RS00065;Dbxref=GenBank:WP_003401514.1;Name=WP_003401514.1;gbkey=CDS;gene=esxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214802.1;locus_tag=DKM08_RS00065;product=type VII secretion system effector EsxH;protein_id=WP_003401514.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 19143 20030 . + . ID=gene-DKM08_RS00070;Name=espG3;gbkey=Gene;gene=espG3;gene_biotype=protein_coding;locus_tag=DKM08_RS00070;old_locus_tag=DKM08_00070 NZ_QFYX01000001.1 Protein Homology CDS 19143 20030 . + 0 ID=cds-WP_003401521.1;Parent=gene-DKM08_RS00070;Dbxref=GenBank:WP_003401521.1;Name=WP_003401521.1;gbkey=CDS;gene=espG3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214803.1;locus_tag=DKM08_RS00070;product=type VII secretion system ESX-3 associated protein EspG3;protein_id=WP_003401521.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 20077 21495 . + . ID=gene-DKM08_RS00075;Name=eccD3;gbkey=Gene;gene=eccD3;gene_biotype=protein_coding;locus_tag=DKM08_RS00075;old_locus_tag=DKM08_00075 NZ_QFYX01000001.1 Protein Homology CDS 20077 21495 . + 0 ID=cds-WP_010950375.1;Parent=gene-DKM08_RS00075;Dbxref=GenBank:WP_010950375.1;Name=WP_010950375.1;gbkey=CDS;gene=eccD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214804.1;locus_tag=DKM08_RS00075;product=type VII secretion system ESX-3 subunit EccD3;protein_id=WP_010950375.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 21492 22877 . + . ID=gene-DKM08_RS00080;Name=mycP3;gbkey=Gene;gene=mycP3;gene_biotype=protein_coding;locus_tag=DKM08_RS00080;old_locus_tag=DKM08_00080 NZ_QFYX01000001.1 Protein Homology CDS 21492 22877 . + 0 ID=cds-WP_003401528.1;Parent=gene-DKM08_RS00080;Dbxref=GenBank:WP_003401528.1;Name=WP_003401528.1;gbkey=CDS;gene=mycP3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214805.1;locus_tag=DKM08_RS00080;product=type VII secretion system ESX-3 serine protease mycosin MycP3;protein_id=WP_003401528.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 22874 23869 . + . ID=gene-DKM08_RS00085;Name=eccE3;gbkey=Gene;gene=eccE3;gene_biotype=protein_coding;locus_tag=DKM08_RS00085;old_locus_tag=DKM08_00085 NZ_QFYX01000001.1 Protein Homology CDS 22874 23869 . + 0 ID=cds-WP_003401533.1;Parent=gene-DKM08_RS00085;Dbxref=GenBank:WP_003401533.1;Name=WP_003401533.1;gbkey=CDS;gene=eccE3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214806.1;locus_tag=DKM08_RS00085;product=type VII secretion system ESX-3 subunit EccE3;protein_id=WP_003401533.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 23856 25058 . - . ID=gene-DKM08_RS00090;Name=DKM08_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00090;old_locus_tag=DKM08_00090 NZ_QFYX01000001.1 Protein Homology CDS 23856 25058 . - 0 ID=cds-WP_003898396.1;Parent=gene-DKM08_RS00090;Dbxref=GenBank:WP_003898396.1;Name=WP_003898396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214807.1;locus_tag=DKM08_RS00090;product=alpha/beta fold hydrolase;protein_id=WP_003898396.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 25165 25950 . + . ID=gene-DKM08_RS00095;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=DKM08_RS00095;old_locus_tag=DKM08_00095 NZ_QFYX01000001.1 Protein Homology CDS 25165 25950 . + 0 ID=cds-WP_003401538.1;Parent=gene-DKM08_RS00095;Dbxref=GenBank:WP_003401538.1;Name=WP_003401538.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214808.1;locus_tag=DKM08_RS00095;product=trans-aconitate 2-methyltransferase;protein_id=WP_003401538.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 25939 26742 . - . ID=gene-DKM08_RS00100;Name=stf0;gbkey=Gene;gene=stf0;gene_biotype=protein_coding;locus_tag=DKM08_RS00100;old_locus_tag=DKM08_00100 NZ_QFYX01000001.1 Protein Homology CDS 25939 26742 . - 0 ID=cds-WP_003401540.1;Parent=gene-DKM08_RS00100;Dbxref=GenBank:WP_003401540.1;Name=WP_003401540.1;Ontology_term=GO:0016740;gbkey=CDS;gene=stf0;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214809.1;locus_tag=DKM08_RS00100;product=trehalose 2-sulfotransferase;protein_id=WP_003401540.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 26752 28149 . - . ID=gene-DKM08_RS00105;Name=DKM08_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00105;old_locus_tag=DKM08_00105 NZ_QFYX01000001.1 Protein Homology CDS 26752 28149 . - 0 ID=cds-WP_003401544.1;Parent=gene-DKM08_RS00105;Dbxref=GenBank:WP_003401544.1;Name=WP_003401544.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177712.1;locus_tag=DKM08_RS00105;product=sulfatase family protein;protein_id=WP_003401544.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 28328 30112 . + . ID=gene-DKM08_RS00110;Name=DKM08_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00110;old_locus_tag=DKM08_00110 NZ_QFYX01000001.1 Protein Homology CDS 28328 30112 . + 0 ID=cds-WP_044798974.1;Parent=gene-DKM08_RS00110;Dbxref=GenBank:WP_044798974.1;Name=WP_044798974.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177713.1;locus_tag=DKM08_RS00110;product=PE family protein;protein_id=WP_044798974.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 30255 30482 . + . ID=gene-DKM08_RS00115;Name=DKM08_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00115;old_locus_tag=DKM08_00115 NZ_QFYX01000001.1 Protein Homology CDS 30255 30482 . + 0 ID=cds-WP_003401555.1;Parent=gene-DKM08_RS00115;Dbxref=GenBank:WP_003401555.1;Name=WP_003401555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214812.1;locus_tag=DKM08_RS00115;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003401555.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 30479 30781 . + . ID=gene-DKM08_RS00120;Name=DKM08_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00120;old_locus_tag=DKM08_00120 NZ_QFYX01000001.1 Protein Homology CDS 30479 30781 . + 0 ID=cds-WP_003401560.1;Parent=gene-DKM08_RS00120;Dbxref=GenBank:WP_003401560.1;Name=WP_003401560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214813.1;locus_tag=DKM08_RS00120;product=toxin-antitoxin system toxin;protein_id=WP_003401560.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 30829 31050 . + . ID=gene-DKM08_RS00125;Name=vapB2;gbkey=Gene;gene=vapB2;gene_biotype=protein_coding;locus_tag=DKM08_RS00125;old_locus_tag=DKM08_00125 NZ_QFYX01000001.1 Protein Homology CDS 30829 31050 . + 0 ID=cds-WP_003401563.1;Parent=gene-DKM08_RS00125;Dbxref=GenBank:WP_003401563.1;Name=WP_003401563.1;gbkey=CDS;gene=vapB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214814.1;locus_tag=DKM08_RS00125;product=type II toxin-antitoxin system antitoxin VapB2;protein_id=WP_003401563.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 31047 31472 . + . ID=gene-DKM08_RS00130;Name=DKM08_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00130;old_locus_tag=DKM08_00130 NZ_QFYX01000001.1 Protein Homology CDS 31047 31472 . + 0 ID=cds-WP_003401566.1;Parent=gene-DKM08_RS00130;Dbxref=GenBank:WP_003401566.1;Name=WP_003401566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214815.1;locus_tag=DKM08_RS00130;product=PIN domain nuclease;protein_id=WP_003401566.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 31607 32239 . + . ID=gene-DKM08_RS00135;Name=DKM08_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00135;old_locus_tag=DKM08_00135 NZ_QFYX01000001.1 Protein Homology CDS 31607 32239 . + 0 ID=cds-WP_003401571.1;Parent=gene-DKM08_RS00135;Dbxref=GenBank:WP_003401571.1;Name=WP_003401571.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214816.1;locus_tag=DKM08_RS00135;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401571.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 32236 33144 . + . ID=gene-DKM08_RS00140;Name=DKM08_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00140;old_locus_tag=DKM08_00140 NZ_QFYX01000001.1 Protein Homology CDS 32236 33144 . + 0 ID=cds-WP_003900117.1;Parent=gene-DKM08_RS00140;Dbxref=GenBank:WP_003900117.1;Name=WP_003900117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214817.1;locus_tag=DKM08_RS00140;product=protochlorophyllide reductase;protein_id=WP_003900117.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 33152 42696 . - . ID=gene-DKM08_RS22585;Name=DKM08_RS22585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22585;old_locus_tag=DKM08_00145;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 33152 42696 . - 0 ID=cds-DKM08_RS22585;Parent=gene-DKM08_RS22585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913099.1;locus_tag=DKM08_RS22585;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 42899 43570 . + . ID=gene-DKM08_RS00155;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=DKM08_RS00155;old_locus_tag=DKM08_00150 NZ_QFYX01000001.1 Protein Homology CDS 42899 43570 . + 0 ID=cds-WP_003401584.1;Parent=gene-DKM08_RS00155;Dbxref=GenBank:WP_003401584.1;Name=WP_003401584.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214820.1;locus_tag=DKM08_RS00155;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_003401584.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 43558 44040 . - . ID=gene-DKM08_RS00160;Name=DKM08_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00160;old_locus_tag=DKM08_00155 NZ_QFYX01000001.1 Protein Homology CDS 43558 44040 . - 0 ID=cds-WP_003401589.1;Parent=gene-DKM08_RS00160;Dbxref=GenBank:WP_003401589.1;Name=WP_003401589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214821.1;locus_tag=DKM08_RS00160;product=hypothetical protein;protein_id=WP_003401589.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 44098 44814 . + . ID=gene-DKM08_RS00165;Name=DKM08_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00165;old_locus_tag=DKM08_00160 NZ_QFYX01000001.1 Protein Homology CDS 44098 44814 . + 0 ID=cds-WP_003401594.1;Parent=gene-DKM08_RS00165;Dbxref=GenBank:WP_003401594.1;Name=WP_003401594.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214822.1;locus_tag=DKM08_RS00165;product=phosphatase PAP2 family protein;protein_id=WP_003401594.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 44916 45572 . + . ID=gene-DKM08_RS00170;Name=DKM08_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00170;old_locus_tag=DKM08_00165 NZ_QFYX01000001.1 Protein Homology CDS 44916 45572 . + 0 ID=cds-WP_003401597.1;Parent=gene-DKM08_RS00170;Dbxref=GenBank:WP_003401597.1;Name=WP_003401597.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214823.1;locus_tag=DKM08_RS00170;product=L%2CD-transpeptidase family protein;protein_id=WP_003401597.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 45642 46133 . - . ID=gene-DKM08_RS00175;Name=DKM08_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00175;old_locus_tag=DKM08_00170 NZ_QFYX01000001.1 Protein Homology CDS 45642 46133 . - 0 ID=cds-WP_003401601.1;Parent=gene-DKM08_RS00175;Dbxref=GenBank:WP_003401601.1;Name=WP_003401601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214824.1;locus_tag=DKM08_RS00175;product=nuclear transport factor 2 family protein;protein_id=WP_003401601.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 46157 47386 . + . ID=gene-DKM08_RS00180;Name=DKM08_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00180;old_locus_tag=DKM08_00175 NZ_QFYX01000001.1 Protein Homology CDS 46157 47386 . + 0 ID=cds-WP_003898398.1;Parent=gene-DKM08_RS00180;Dbxref=GenBank:WP_003898398.1;Name=WP_003898398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214825.1;locus_tag=DKM08_RS00180;product=hypothetical protein;protein_id=WP_003898398.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 47541 49403 . + . ID=gene-DKM08_RS00185;Name=DKM08_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00185;old_locus_tag=DKM08_00180 NZ_QFYX01000001.1 Protein Homology CDS 47541 49403 . + 0 ID=cds-WP_003401607.1;Parent=gene-DKM08_RS00185;Dbxref=GenBank:WP_003401607.1;Name=WP_003401607.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214826.1;locus_tag=DKM08_RS00185;product=Hsp70 family protein;protein_id=WP_003401607.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 49475 49861 . + . ID=gene-DKM08_RS00190;Name=DKM08_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00190;old_locus_tag=DKM08_00185 NZ_QFYX01000001.1 Protein Homology CDS 49475 49861 . + 0 ID=cds-WP_003401613.1;Parent=gene-DKM08_RS00190;Dbxref=GenBank:WP_003401613.1;Name=WP_003401613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214827.1;locus_tag=DKM08_RS00190;product=hypothetical protein;protein_id=WP_003401613.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 49864 50499 . - . ID=gene-DKM08_RS00195;Name=DKM08_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00195;old_locus_tag=DKM08_00190 NZ_QFYX01000001.1 Protein Homology CDS 49864 50499 . - 0 ID=cds-WP_031657229.1;Parent=gene-DKM08_RS00195;Dbxref=GenBank:WP_031657229.1;Name=WP_031657229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873918.1;locus_tag=DKM08_RS00195;product=DUF3060 domain-containing protein;protein_id=WP_031657229.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 50587 51471 . + . ID=gene-DKM08_RS00200;Name=DKM08_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00200;old_locus_tag=DKM08_00195 NZ_QFYX01000001.1 Protein Homology CDS 50587 51471 . + 0 ID=cds-WP_003401621.1;Parent=gene-DKM08_RS00200;Dbxref=GenBank:WP_003401621.1;Name=WP_003401621.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214829.1;locus_tag=DKM08_RS00200;product=glycoside hydrolase family 16 protein;protein_id=WP_003401621.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 51520 52134 . + . ID=gene-DKM08_RS00205;Name=DKM08_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00205;old_locus_tag=DKM08_00200 NZ_QFYX01000001.1 Protein Homology CDS 51520 52134 . + 0 ID=cds-WP_003401623.1;Parent=gene-DKM08_RS00205;Dbxref=GenBank:WP_003401623.1;Name=WP_003401623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214830.1;locus_tag=DKM08_RS00205;product=muconolactone Delta-isomerase family protein;protein_id=WP_003401623.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 52158 52928 . - . ID=gene-DKM08_RS00210;Name=DKM08_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00210;old_locus_tag=DKM08_00205 NZ_QFYX01000001.1 Protein Homology CDS 52158 52928 . - 0 ID=cds-WP_003401625.1;Parent=gene-DKM08_RS00210;Dbxref=GenBank:WP_003401625.1;Name=WP_003401625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214831.1;locus_tag=DKM08_RS00210;product=glycerophosphodiester phosphodiesterase;protein_id=WP_003401625.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 53189 53259 . - . ID=gene-DKM08_RS00215;Name=DKM08_RS00215;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS00215;old_locus_tag=DKM08_00210 NZ_QFYX01000001.1 tRNAscan-SE tRNA 53189 53259 . - . ID=rna-DKM08_RS00215;Parent=gene-DKM08_RS00215;anticodon=(pos:complement(53225..53227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS00215;product=tRNA-Gly NZ_QFYX01000001.1 tRNAscan-SE exon 53189 53259 . - . ID=exon-DKM08_RS00215-1;Parent=rna-DKM08_RS00215;anticodon=(pos:complement(53225..53227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS00215;product=tRNA-Gly NZ_QFYX01000001.1 RefSeq gene 53290 54084 . - . ID=gene-DKM08_RS00220;Name=DKM08_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00220;old_locus_tag=DKM08_00215 NZ_QFYX01000001.1 Protein Homology CDS 53290 54084 . - 0 ID=cds-WP_003401627.1;Parent=gene-DKM08_RS00220;Dbxref=GenBank:WP_003401627.1;Name=WP_003401627.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177716.1;locus_tag=DKM08_RS00220;product=ZIP family metal transporter;protein_id=WP_003401627.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 54133 54801 . + . ID=gene-DKM08_RS00225;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=DKM08_RS00225;old_locus_tag=DKM08_00220 NZ_QFYX01000001.1 Protein Homology CDS 54133 54801 . + 0 ID=cds-WP_003401632.1;Parent=gene-DKM08_RS00225;Dbxref=GenBank:WP_003401632.1;Name=WP_003401632.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214833.1;locus_tag=DKM08_RS00225;product=pyroglutamyl-peptidase I;protein_id=WP_003401632.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 54873 55535 . + . ID=gene-DKM08_RS00230;Name=DKM08_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00230;old_locus_tag=DKM08_00225 NZ_QFYX01000001.1 Protein Homology CDS 54873 55535 . + 0 ID=cds-WP_003401636.1;Parent=gene-DKM08_RS00230;Dbxref=GenBank:WP_003401636.1;Name=WP_003401636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214834.1;locus_tag=DKM08_RS00230;product=hypothetical protein;protein_id=WP_003401636.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 55567 56139 . + . ID=gene-DKM08_RS00235;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=DKM08_RS00235;old_locus_tag=DKM08_00230 NZ_QFYX01000001.1 Protein Homology CDS 55567 56139 . + 0 ID=cds-WP_003401638.1;Parent=gene-DKM08_RS00235;Dbxref=GenBank:WP_003401638.1;Name=WP_003401638.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214835.1;locus_tag=DKM08_RS00235;product=dCTP deaminase;protein_id=WP_003401638.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 56245 57576 . + . ID=gene-DKM08_RS00240;Name=udgA;gbkey=Gene;gene=udgA;gene_biotype=protein_coding;locus_tag=DKM08_RS00240;old_locus_tag=DKM08_00235 NZ_QFYX01000001.1 Protein Homology CDS 56245 57576 . + 0 ID=cds-WP_003898400.1;Parent=gene-DKM08_RS00240;Dbxref=GenBank:WP_003898400.1;Name=WP_003898400.1;Ontology_term=GO:0016616;gbkey=CDS;gene=udgA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214836.1;locus_tag=DKM08_RS00240;product=UDP-glucose dehydrogenase family protein;protein_id=WP_003898400.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 57565 58236 . - . ID=gene-DKM08_RS00245;Name=DKM08_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00245;old_locus_tag=DKM08_00240 NZ_QFYX01000001.1 Protein Homology CDS 57565 58236 . - 0 ID=cds-WP_003401643.1;Parent=gene-DKM08_RS00245;Dbxref=GenBank:WP_003401643.1;Name=WP_003401643.1;Ontology_term=GO:0006506,GO:0000225;gbkey=CDS;go_function=N-acetylglucosaminylphosphatidylinositol deacetylase activity|0000225||IEA;go_process=GPI anchor biosynthetic process|0006506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214837.1;locus_tag=DKM08_RS00245;product=PIG-L family deacetylase;protein_id=WP_003401643.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 58337 59017 . + . ID=gene-DKM08_RS00250;Name=DKM08_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00250;old_locus_tag=DKM08_00245 NZ_QFYX01000001.1 Protein Homology CDS 58337 59017 . + 0 ID=cds-WP_003401648.1;Parent=gene-DKM08_RS00250;Dbxref=GenBank:WP_003401648.1;Name=WP_003401648.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214838.1;locus_tag=DKM08_RS00250;product=ArsR/SmtB family transcription factor;protein_id=WP_003401648.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 59051 59713 . + . ID=gene-DKM08_RS00255;Name=DKM08_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00255;old_locus_tag=DKM08_00250 NZ_QFYX01000001.1 Protein Homology CDS 59051 59713 . + 0 ID=cds-WP_003900903.1;Parent=gene-DKM08_RS00255;Dbxref=GenBank:WP_003900903.1;Name=WP_003900903.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900903.1;locus_tag=DKM08_RS00255;product=class I SAM-dependent methyltransferase;protein_id=WP_003900903.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 59681 61030 . - . ID=gene-DKM08_RS00260;Name=DKM08_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00260;old_locus_tag=DKM08_00255 NZ_QFYX01000001.1 Protein Homology CDS 59681 61030 . - 0 ID=cds-WP_010950380.1;Parent=gene-DKM08_RS00260;Dbxref=GenBank:WP_010950380.1;Name=WP_010950380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214841.1;locus_tag=DKM08_RS00260;product=cytochrome P450;protein_id=WP_010950380.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 61096 61698 . + . ID=gene-DKM08_RS00265;Name=DKM08_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00265;old_locus_tag=DKM08_00260 NZ_QFYX01000001.1 Protein Homology CDS 61096 61698 . + 0 ID=cds-WP_003401651.1;Parent=gene-DKM08_RS00265;Dbxref=GenBank:WP_003401651.1;Name=WP_003401651.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214842.1;locus_tag=DKM08_RS00265;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401651.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 61679 62305 . - . ID=gene-DKM08_RS00270;Name=DKM08_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00270;old_locus_tag=DKM08_00265 NZ_QFYX01000001.1 Protein Homology CDS 61679 62305 . - 0 ID=cds-WP_010950381.1;Parent=gene-DKM08_RS00270;Dbxref=GenBank:WP_010950381.1;Name=WP_010950381.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214843.1;locus_tag=DKM08_RS00270;product=class I SAM-dependent methyltransferase;protein_id=WP_010950381.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 62332 63072 . - . ID=gene-DKM08_RS00275;Name=DKM08_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00275;old_locus_tag=DKM08_00270 NZ_QFYX01000001.1 Protein Homology CDS 62332 63072 . - 0 ID=cds-WP_003401656.1;Parent=gene-DKM08_RS00275;Dbxref=GenBank:WP_003401656.1;Name=WP_003401656.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214844.1;locus_tag=DKM08_RS00275;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401656.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 63186 64352 . + . ID=gene-DKM08_RS00280;Name=DKM08_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00280;old_locus_tag=DKM08_00275 NZ_QFYX01000001.1 Protein Homology CDS 63186 64352 . + 0 ID=cds-WP_003900904.1;Parent=gene-DKM08_RS00280;Dbxref=GenBank:WP_003900904.1;Name=WP_003900904.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214845.1;locus_tag=DKM08_RS00280;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900904.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 64457 65212 . + . ID=gene-DKM08_RS00285;Name=DKM08_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00285;old_locus_tag=DKM08_00280 NZ_QFYX01000001.1 Protein Homology CDS 64457 65212 . + 0 ID=cds-WP_031657230.1;Parent=gene-DKM08_RS00285;Dbxref=GenBank:WP_031657230.1;Name=WP_031657230.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302514.1;locus_tag=DKM08_RS00285;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_031657230.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 65239 65613 . + . ID=gene-DKM08_RS00290;Name=DKM08_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00290;old_locus_tag=DKM08_00285 NZ_QFYX01000001.1 Protein Homology CDS 65239 65613 . + 0 ID=cds-WP_003401666.1;Parent=gene-DKM08_RS00290;Dbxref=GenBank:WP_003401666.1;Name=WP_003401666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214847.1;locus_tag=DKM08_RS00290;product=nuclear transport factor 2 family protein;protein_id=WP_003401666.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 65643 66509 . + . ID=gene-DKM08_RS00295;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=DKM08_RS00295;old_locus_tag=DKM08_00290 NZ_QFYX01000001.1 Protein Homology CDS 65643 66509 . + 0 ID=cds-WP_003401670.1;Parent=gene-DKM08_RS00295;Dbxref=GenBank:WP_003401670.1;Name=WP_003401670.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214848.1;locus_tag=DKM08_RS00295;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_003401670.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 66520 66972 . - . ID=gene-DKM08_RS22370;Name=DKM08_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22370;old_locus_tag=DKM08_00295 NZ_QFYX01000001.1 Protein Homology CDS 66520 66972 . - 0 ID=cds-WP_003911159.1;Parent=gene-DKM08_RS22370;Dbxref=GenBank:WP_003911159.1;Name=WP_003911159.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=DKM08_RS22370;product=PE family protein;protein_id=WP_003911159.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 66922 67039 . + . ID=gene-DKM08_RS22590;Name=DKM08_RS22590;end_range=67039,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22590;partial=true;pseudo=true;start_range=.,66922 NZ_QFYX01000001.1 Protein Homology CDS 66922 67039 . + 0 ID=cds-DKM08_RS22590;Parent=gene-DKM08_RS22590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=67039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=DKM08_RS22590;partial=true;product=hypothetical protein;pseudo=true;start_range=.,66922;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 67153 68688 . + . ID=gene-DKM08_RS00305;Name=DKM08_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00305;old_locus_tag=DKM08_00300 NZ_QFYX01000001.1 Protein Homology CDS 67153 68688 . + 0 ID=cds-WP_003900164.1;Parent=gene-DKM08_RS00305;Dbxref=GenBank:WP_003900164.1;Name=WP_003900164.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=DKM08_RS00305;product=HNH endonuclease signature motif containing protein;protein_id=WP_003900164.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 68858 70147 . - . ID=gene-DKM08_RS00315;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=DKM08_RS00315;old_locus_tag=DKM08_00310 NZ_QFYX01000001.1 Protein Homology CDS 68858 70147 . - 0 ID=cds-WP_003401733.1;Parent=gene-DKM08_RS00315;Dbxref=GenBank:WP_003401733.1;Name=WP_003401733.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=aspC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214851.1;locus_tag=DKM08_RS00315;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003401733.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 70178 72826 . - . ID=gene-DKM08_RS00320;Name=DKM08_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00320;old_locus_tag=DKM08_00315 NZ_QFYX01000001.1 Protein Homology CDS 70178 72826 . - 0 ID=cds-WP_023349440.1;Parent=gene-DKM08_RS00320;Dbxref=GenBank:WP_023349440.1;Name=WP_023349440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214852.1;locus_tag=DKM08_RS00320;product=(Fe-S)-binding protein;protein_id=WP_023349440.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 72935 75433 . - . ID=gene-DKM08_RS00325;Name=iniR;gbkey=Gene;gene=iniR;gene_biotype=protein_coding;locus_tag=DKM08_RS00325;old_locus_tag=DKM08_00320 NZ_QFYX01000001.1 Protein Homology CDS 72935 75433 . - 0 ID=cds-WP_003401735.1;Parent=gene-DKM08_RS00325;Dbxref=GenBank:WP_003401735.1;Name=WP_003401735.1;gbkey=CDS;gene=iniR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214853.1;locus_tag=DKM08_RS00325;product=isoniazid response ATPase/transcriptional regulator IniR;protein_id=WP_003401735.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 75619 76158 . + . ID=gene-DKM08_RS00330;Name=DKM08_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00330;old_locus_tag=DKM08_00325 NZ_QFYX01000001.1 Protein Homology CDS 75619 76158 . + 0 ID=cds-WP_003401737.1;Parent=gene-DKM08_RS00330;Dbxref=GenBank:WP_003401737.1;Name=WP_003401737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214854.1;locus_tag=DKM08_RS00330;product=Rv0340 family IniB-related protein;protein_id=WP_003401737.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 76347 77785 . + . ID=gene-DKM08_RS00335;Name=iniB;gbkey=Gene;gene=iniB;gene_biotype=pseudogene;locus_tag=DKM08_RS00335;old_locus_tag=DKM08_00330;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 76347 77785 . + 0 ID=cds-DKM08_RS00335;Parent=gene-DKM08_RS00335;Note=frameshifted;gbkey=CDS;gene=iniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214855.1;locus_tag=DKM08_RS00335;product=isoniazid-induced protein IniB;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 77891 79744 . + . ID=gene-DKM08_RS00340;Name=iniA;gbkey=Gene;gene=iniA;gene_biotype=protein_coding;locus_tag=DKM08_RS00340;old_locus_tag=DKM08_00335 NZ_QFYX01000001.1 Protein Homology CDS 77891 79744 . + 0 ID=cds-WP_015385236.1;Parent=gene-DKM08_RS00340;Dbxref=GenBank:WP_015385236.1;Name=WP_015385236.1;gbkey=CDS;gene=iniA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292084.1;locus_tag=DKM08_RS00340;product=isoniazid-induced dynamin-like GTPase IniA;protein_id=WP_015385236.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 79741 81222 . + . ID=gene-DKM08_RS00345;Name=iniC;gbkey=Gene;gene=iniC;gene_biotype=protein_coding;locus_tag=DKM08_RS00345;old_locus_tag=DKM08_00340 NZ_QFYX01000001.1 Protein Homology CDS 79741 81222 . + 0 ID=cds-WP_003401747.1;Parent=gene-DKM08_RS00345;Dbxref=GenBank:WP_003401747.1;Name=WP_003401747.1;gbkey=CDS;gene=iniC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214857.1;locus_tag=DKM08_RS00345;product=isoniazid-induced dynamin-like GTPase IniC;protein_id=WP_003401747.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 81365 81925 . - . ID=gene-DKM08_RS00350;Name=DKM08_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00350;old_locus_tag=DKM08_00345 NZ_QFYX01000001.1 Protein Homology CDS 81365 81925 . - 0 ID=cds-WP_003401751.1;Parent=gene-DKM08_RS00350;Dbxref=GenBank:WP_003401751.1;Name=WP_003401751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214858.1;locus_tag=DKM08_RS00350;product=hypothetical protein;protein_id=WP_003401751.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 82028 82592 . + . ID=gene-DKM08_RS00355;Name=DKM08_RS00355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS00355;old_locus_tag=DKM08_00350;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 82028 82592 . + 0 ID=cds-DKM08_RS00355;Parent=gene-DKM08_RS00355;Note=frameshifted;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007167464.1;locus_tag=DKM08_RS00355;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 82486 83949 . - . ID=gene-DKM08_RS00360;Name=DKM08_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00360;old_locus_tag=DKM08_00355 NZ_QFYX01000001.1 Protein Homology CDS 82486 83949 . - 0 ID=cds-WP_003898409.1;Parent=gene-DKM08_RS00360;Dbxref=GenBank:WP_003898409.1;Name=WP_003898409.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177718.1;locus_tag=DKM08_RS00360;product=amino acid permease;protein_id=WP_003898409.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 84462 85274 . + . ID=gene-DKM08_RS00365;Name=DKM08_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00365;old_locus_tag=DKM08_00360 NZ_QFYX01000001.1 Protein Homology CDS 84462 85274 . + 0 ID=cds-WP_003911187.1;Parent=gene-DKM08_RS00365;Dbxref=GenBank:WP_003911187.1;Name=WP_003911187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911187.1;locus_tag=DKM08_RS00365;product=TIGR04255 family protein;protein_id=WP_003911187.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 85277 85930 . + . ID=gene-DKM08_RS00370;Name=mosR;gbkey=Gene;gene=mosR;gene_biotype=protein_coding;locus_tag=DKM08_RS00370;old_locus_tag=DKM08_00365 NZ_QFYX01000001.1 Protein Homology CDS 85277 85930 . + 0 ID=cds-WP_003401756.1;Parent=gene-DKM08_RS00370;Dbxref=GenBank:WP_003401756.1;Name=WP_003401756.1;gbkey=CDS;gene=mosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214862.1;locus_tag=DKM08_RS00370;product=hypoxia/intracellular survival transcriptional regulator MosR;protein_id=WP_003401756.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 85933 86592 . + . ID=gene-DKM08_RS00375;Name=DKM08_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00375;old_locus_tag=DKM08_00370 NZ_QFYX01000001.1 Protein Homology CDS 85933 86592 . + 0 ID=cds-WP_003900125.1;Parent=gene-DKM08_RS00375;Dbxref=GenBank:WP_003900125.1;Name=WP_003900125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214863.1;locus_tag=DKM08_RS00375;product=hypothetical protein;protein_id=WP_003900125.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 86819 88696 . + . ID=gene-DKM08_RS00380;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=DKM08_RS00380;old_locus_tag=DKM08_00375 NZ_QFYX01000001.1 Protein Homology CDS 86819 88696 . + 0 ID=cds-WP_003401814.1;Parent=gene-DKM08_RS00380;Dbxref=GenBank:WP_003401814.1;Name=WP_003401814.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214864.1;locus_tag=DKM08_RS00380;product=molecular chaperone DnaK;protein_id=WP_003401814.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 88693 89400 . + . ID=gene-DKM08_RS00385;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=DKM08_RS00385;old_locus_tag=DKM08_00380 NZ_QFYX01000001.1 Protein Homology CDS 88693 89400 . + 0 ID=cds-WP_010950385.1;Parent=gene-DKM08_RS00385;Dbxref=GenBank:WP_010950385.1;Name=WP_010950385.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214865.1;locus_tag=DKM08_RS00385;product=nucleotide exchange factor GrpE;protein_id=WP_010950385.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 89436 90623 . + . ID=gene-DKM08_RS00390;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=DKM08_RS00390;old_locus_tag=DKM08_00385 NZ_QFYX01000001.1 Protein Homology CDS 89436 90623 . + 0 ID=cds-WP_003401821.1;Parent=gene-DKM08_RS00390;Dbxref=GenBank:WP_003401821.1;Name=WP_003401821.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177719.1;locus_tag=DKM08_RS00390;product=molecular chaperone DnaJ;protein_id=WP_003401821.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 90623 91003 . + . ID=gene-DKM08_RS00395;Name=hspR;gbkey=Gene;gene=hspR;gene_biotype=protein_coding;locus_tag=DKM08_RS00395;old_locus_tag=DKM08_00390 NZ_QFYX01000001.1 Protein Homology CDS 90623 91003 . + 0 ID=cds-WP_003401823.1;Parent=gene-DKM08_RS00395;Dbxref=GenBank:WP_003401823.1;Name=WP_003401823.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hspR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214867.1;locus_tag=DKM08_RS00395;product=heat shock protein transcriptional repressor HspR;protein_id=WP_003401823.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 91128 91679 . - . ID=gene-DKM08_RS22595;Name=DKM08_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22595 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 91128 91679 . - 0 ID=cds-WP_003898412.1;Parent=gene-DKM08_RS22595;Dbxref=GenBank:WP_003898412.1;Name=WP_003898412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22595;product=hypothetical protein;protein_id=WP_003898412.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 91762 101651 . - . ID=gene-DKM08_RS00400;Name=DKM08_RS00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS00400;old_locus_tag=DKM08_00395;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 91762 101651 . - 0 ID=cds-DKM08_RS00400;Parent=gene-DKM08_RS00400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177721.2;locus_tag=DKM08_RS00400;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 101802 102446 . - . ID=gene-DKM08_RS00405;Name=DKM08_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00405;old_locus_tag=DKM08_00400 NZ_QFYX01000001.1 Protein Homology CDS 101802 102446 . - 0 ID=cds-WP_003401827.1;Parent=gene-DKM08_RS00405;Dbxref=GenBank:WP_003401827.1;Name=WP_003401827.1;Ontology_term=GO:0016790,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214870.1;locus_tag=DKM08_RS00405;product=PaaI family thioesterase;protein_id=WP_003401827.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 102443 103741 . - . ID=gene-DKM08_RS00410;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=DKM08_RS00410;old_locus_tag=DKM08_00405 NZ_QFYX01000001.1 Protein Homology CDS 102443 103741 . - 0 ID=cds-WP_003401829.1;Parent=gene-DKM08_RS00410;Dbxref=GenBank:WP_003401829.1;Name=WP_003401829.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214871.1;locus_tag=DKM08_RS00410;product=adenylosuccinate synthase;protein_id=WP_003401829.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 103832 104479 . + . ID=gene-DKM08_RS00415;Name=DKM08_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00415;old_locus_tag=DKM08_00410 NZ_QFYX01000001.1 Protein Homology CDS 103832 104479 . + 0 ID=cds-WP_003401831.1;Parent=gene-DKM08_RS00415;Dbxref=GenBank:WP_003401831.1;Name=WP_003401831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214872.1;locus_tag=DKM08_RS00415;product=hypothetical protein;protein_id=WP_003401831.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 104490 105269 . + . ID=gene-DKM08_RS00420;Name=DKM08_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00420;old_locus_tag=DKM08_00415 NZ_QFYX01000001.1 Protein Homology CDS 104490 105269 . + 0 ID=cds-WP_003401851.1;Parent=gene-DKM08_RS00420;Dbxref=GenBank:WP_003401851.1;Name=WP_003401851.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214873.1;locus_tag=DKM08_RS00420;product=site-2 protease family protein;protein_id=WP_003401851.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 105274 105687 . - . ID=gene-DKM08_RS00425;Name=DKM08_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00425;old_locus_tag=DKM08_00420 NZ_QFYX01000001.1 Protein Homology CDS 105274 105687 . - 0 ID=cds-WP_003401852.1;Parent=gene-DKM08_RS00425;Dbxref=GenBank:WP_003401852.1;Name=WP_003401852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011726247.1;locus_tag=DKM08_RS00425;product=DUF3151 domain-containing protein;protein_id=WP_003401852.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 105794 106621 . + . ID=gene-DKM08_RS00430;Name=DKM08_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00430;old_locus_tag=DKM08_00425 NZ_QFYX01000001.1 Protein Homology CDS 105794 106621 . + 0 ID=cds-WP_003401853.1;Parent=gene-DKM08_RS00430;Dbxref=GenBank:WP_003401853.1;Name=WP_003401853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214875.1;locus_tag=DKM08_RS00430;product=membrane protein;protein_id=WP_003401853.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 106843 108225 . + . ID=gene-DKM08_RS00435;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=DKM08_RS00435;old_locus_tag=DKM08_00430 NZ_QFYX01000001.1 Protein Homology CDS 106843 108225 . + 0 ID=cds-WP_003898415.1;Parent=gene-DKM08_RS00435;Dbxref=GenBank:WP_003898415.1;Name=WP_003898415.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214876.1;locus_tag=DKM08_RS00435;product=magnesium transporter;protein_id=WP_003898415.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 108237 109271 . - . ID=gene-DKM08_RS00440;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=DKM08_RS00440;old_locus_tag=DKM08_00435 NZ_QFYX01000001.1 Protein Homology CDS 108237 109271 . - 0 ID=cds-WP_003401856.1;Parent=gene-DKM08_RS00440;Dbxref=GenBank:WP_003401856.1;Name=WP_003401856.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214877.1;locus_tag=DKM08_RS00440;product=class II fructose-bisphosphate aldolase;protein_id=WP_003401856.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 109367 110050 . + . ID=gene-DKM08_RS00445;Name=DKM08_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00445;old_locus_tag=DKM08_00440 NZ_QFYX01000001.1 Protein Homology CDS 109367 110050 . + 0 ID=cds-WP_010950388.1;Parent=gene-DKM08_RS00445;Dbxref=GenBank:WP_010950388.1;Name=WP_010950388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214878.1;locus_tag=DKM08_RS00445;product=VTT domain-containing protein;protein_id=WP_010950388.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 110039 111169 . - . ID=gene-DKM08_RS00450;Name=DKM08_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00450;old_locus_tag=DKM08_00445 NZ_QFYX01000001.1 Protein Homology CDS 110039 111169 . - 0 ID=cds-WP_003401858.1;Parent=gene-DKM08_RS00450;Dbxref=GenBank:WP_003401858.1;Name=WP_003401858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214879.1;locus_tag=DKM08_RS00450;product=glycoside hydrolase family 76 protein;protein_id=WP_003401858.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 111194 111787 . - . ID=gene-DKM08_RS00455;Name=DKM08_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00455;old_locus_tag=DKM08_00450 NZ_QFYX01000001.1 Protein Homology CDS 111194 111787 . - 0 ID=cds-WP_003401859.1;Parent=gene-DKM08_RS00455;Dbxref=GenBank:WP_003401859.1;Name=WP_003401859.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214880.1;locus_tag=DKM08_RS00455;product=zeta toxin family protein;protein_id=WP_003401859.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 111816 112205 . - . ID=gene-DKM08_RS00460;Name=DKM08_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00460;old_locus_tag=DKM08_00455 NZ_QFYX01000001.1 Protein Homology CDS 111816 112205 . - 0 ID=cds-WP_003401860.1;Parent=gene-DKM08_RS00460;Dbxref=GenBank:WP_003401860.1;Name=WP_003401860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214881.1;locus_tag=DKM08_RS00460;product=TA system antitoxin ParD family protein;protein_id=WP_003401860.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 112286 113497 . - . ID=gene-DKM08_RS00465;Name=DKM08_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00465;old_locus_tag=DKM08_00460 NZ_QFYX01000001.1 Protein Homology CDS 112286 113497 . - 0 ID=cds-WP_010950389.1;Parent=gene-DKM08_RS00465;Dbxref=GenBank:WP_010950389.1;Name=WP_010950389.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214882.1;locus_tag=DKM08_RS00465;product=vWA domain-containing protein;protein_id=WP_010950389.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 113503 114105 . - . ID=gene-DKM08_RS00470;Name=DKM08_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00470;old_locus_tag=DKM08_00465 NZ_QFYX01000001.1 Protein Homology CDS 113503 114105 . - 0 ID=cds-WP_003898417.1;Parent=gene-DKM08_RS00470;Dbxref=GenBank:WP_003898417.1;Name=WP_003898417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898417.1;locus_tag=DKM08_RS00470;product=SRPBCC family protein;protein_id=WP_003898417.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 114119 115015 . - . ID=gene-DKM08_RS00475;Name=DKM08_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00475;old_locus_tag=DKM08_00470 NZ_QFYX01000001.1 Protein Homology CDS 114119 115015 . - 0 ID=cds-WP_003401863.1;Parent=gene-DKM08_RS00475;Dbxref=GenBank:WP_003401863.1;Name=WP_003401863.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214884.1;locus_tag=DKM08_RS00475;product=AAA family ATPase;protein_id=WP_003401863.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 115012 115605 . - . ID=gene-DKM08_RS00480;Name=DKM08_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00480;old_locus_tag=DKM08_00475 NZ_QFYX01000001.1 Protein Homology CDS 115012 115605 . - 0 ID=cds-WP_003401864.1;Parent=gene-DKM08_RS00480;Dbxref=GenBank:WP_003401864.1;Name=WP_003401864.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214885.1;locus_tag=DKM08_RS00480;product=nucleotidyltransferase family protein;protein_id=WP_003401864.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 115602 116357 . - . ID=gene-DKM08_RS00485;Name=DKM08_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00485;old_locus_tag=DKM08_00480 NZ_QFYX01000001.1 Protein Homology CDS 115602 116357 . - 0 ID=cds-WP_003401865.1;Parent=gene-DKM08_RS00485;Dbxref=GenBank:WP_003401865.1;Name=WP_003401865.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214886.1;locus_tag=DKM08_RS00485;product=XdhC family protein;protein_id=WP_003401865.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 116376 118775 . - . ID=gene-DKM08_RS00490;Name=DKM08_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00490;old_locus_tag=DKM08_00485 NZ_QFYX01000001.1 Protein Homology CDS 116376 118775 . - 0 ID=cds-WP_010950391.1;Parent=gene-DKM08_RS00490;Dbxref=GenBank:WP_010950391.1;Name=WP_010950391.1;Ontology_term=GO:0005507,GO:0030151,GO:0043885;gbkey=CDS;go_function=copper ion binding|0005507||IEA,molybdenum ion binding|0030151||IEA,anaerobic carbon-monoxide dehydrogenase activity|0043885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214887.1;locus_tag=DKM08_RS00490;product=aerobic carbon-monoxide dehydrogenase large subunit;protein_id=WP_010950391.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 118772 119251 . - . ID=gene-DKM08_RS00495;Name=DKM08_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00495;old_locus_tag=DKM08_00490 NZ_QFYX01000001.1 Protein Homology CDS 118772 119251 . - 0 ID=cds-WP_003401867.1;Parent=gene-DKM08_RS00495;Dbxref=GenBank:WP_003401867.1;Name=WP_003401867.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214888.1;locus_tag=DKM08_RS00495;product=(2Fe-2S)-binding protein;protein_id=WP_003401867.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 119266 120168 . - . ID=gene-DKM08_RS00500;Name=DKM08_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00500;old_locus_tag=DKM08_00495 NZ_QFYX01000001.1 Protein Homology CDS 119266 120168 . - 0 ID=cds-WP_003898419.1;Parent=gene-DKM08_RS00500;Dbxref=GenBank:WP_003898419.1;Name=WP_003898419.1;Ontology_term=GO:0050660,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898419.1;locus_tag=DKM08_RS00500;product=FAD binding domain-containing protein;protein_id=WP_003898419.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 120202 121368 . - . ID=gene-DKM08_RS00505;Name=DKM08_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00505;old_locus_tag=DKM08_00500 NZ_QFYX01000001.1 Protein Homology CDS 120202 121368 . - 0 ID=cds-WP_003898420.1;Parent=gene-DKM08_RS00505;Dbxref=GenBank:WP_003898420.1;Name=WP_003898420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918064.1;locus_tag=DKM08_RS00505;product=XdhC family protein;protein_id=WP_003898420.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 121393 122358 . + . ID=gene-DKM08_RS00510;Name=DKM08_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00510;old_locus_tag=DKM08_00505 NZ_QFYX01000001.1 Protein Homology CDS 121393 122358 . + 0 ID=cds-WP_003401875.1;Parent=gene-DKM08_RS00510;Dbxref=GenBank:WP_003401875.1;Name=WP_003401875.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214891.1;locus_tag=DKM08_RS00510;product=LysR family transcriptional regulator;protein_id=WP_003401875.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 122609 122830 . + . ID=gene-DKM08_RS00515;Name=DKM08_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00515;old_locus_tag=DKM08_00510 NZ_QFYX01000001.1 Protein Homology CDS 122609 122830 . + 0 ID=cds-WP_003401880.1;Parent=gene-DKM08_RS00515;Dbxref=GenBank:WP_003401880.1;Name=WP_003401880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214892.1;locus_tag=DKM08_RS00515;product=hypothetical protein;protein_id=WP_003401880.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 122949 123164 . + . ID=gene-DKM08_RS00520;Name=secE2;gbkey=Gene;gene=secE2;gene_biotype=protein_coding;locus_tag=DKM08_RS00520;old_locus_tag=DKM08_00515 NZ_QFYX01000001.1 Protein Homology CDS 122949 123164 . + 0 ID=cds-WP_003401885.1;Parent=gene-DKM08_RS00520;Dbxref=GenBank:WP_003401885.1;Name=WP_003401885.1;gbkey=CDS;gene=secE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177722.1;locus_tag=DKM08_RS00520;product=calcium dodecin;protein_id=WP_003401885.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 123240 123890 . - . ID=gene-DKM08_RS00525;Name=DKM08_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00525;old_locus_tag=DKM08_00520 NZ_QFYX01000001.1 Protein Homology CDS 123240 123890 . - 0 ID=cds-WP_003900914.1;Parent=gene-DKM08_RS00525;Dbxref=GenBank:WP_003900914.1;Name=WP_003900914.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900914.1;locus_tag=DKM08_RS00525;product=TrmH family RNA methyltransferase;protein_id=WP_003900914.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 123887 124795 . - . ID=gene-DKM08_RS00530;Name=DKM08_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00530;old_locus_tag=DKM08_00525 NZ_QFYX01000001.1 Protein Homology CDS 123887 124795 . - 0 ID=cds-WP_003401890.1;Parent=gene-DKM08_RS00530;Dbxref=GenBank:WP_003401890.1;Name=WP_003401890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214895.1;locus_tag=DKM08_RS00530;product=hypothetical protein;protein_id=WP_003401890.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 124813 125352 . - . ID=gene-DKM08_RS00535;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=DKM08_RS00535;old_locus_tag=DKM08_00530 NZ_QFYX01000001.1 Protein Homology CDS 124813 125352 . - 0 ID=cds-WP_003401894.1;Parent=gene-DKM08_RS00535;Dbxref=GenBank:WP_003401894.1;Name=WP_003401894.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177723.1;locus_tag=DKM08_RS00535;product=orotate phosphoribosyltransferase;protein_id=WP_003401894.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 125433 126287 . - . ID=gene-DKM08_RS00540;Name=ttfA;gbkey=Gene;gene=ttfA;gene_biotype=protein_coding;locus_tag=DKM08_RS00540;old_locus_tag=DKM08_00535 NZ_QFYX01000001.1 Protein Homology CDS 125433 126287 . - 0 ID=cds-WP_003401897.1;Parent=gene-DKM08_RS00540;Dbxref=GenBank:WP_003401897.1;Name=WP_003401897.1;Ontology_term=GO:0071555;gbkey=CDS;gene=ttfA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214897.1;locus_tag=DKM08_RS00540;product=trehalose monomycolate transport factor TtfA;protein_id=WP_003401897.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 126428 128974 . - . ID=gene-DKM08_RS00545;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=DKM08_RS00545;old_locus_tag=DKM08_00540 NZ_QFYX01000001.1 Protein Homology CDS 126428 128974 . - 0 ID=cds-WP_003401905.1;Parent=gene-DKM08_RS00545;Dbxref=GenBank:WP_003401905.1;Name=WP_003401905.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401905.1;locus_tag=DKM08_RS00545;product=ATP-dependent chaperone ClpB;protein_id=WP_003401905.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 129107 130279 . + . ID=gene-DKM08_RS00550;Name=DKM08_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00550;old_locus_tag=DKM08_00545 NZ_QFYX01000001.1 Protein Homology CDS 129107 130279 . + 0 ID=cds-WP_003401910.1;Parent=gene-DKM08_RS00550;Dbxref=GenBank:WP_003401910.1;Name=WP_003401910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214899.1;locus_tag=DKM08_RS00550;product=FAD-binding oxidoreductase;protein_id=WP_003401910.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 130383 133640 . + . ID=gene-DKM08_RS00555;Name=DKM08_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00555;old_locus_tag=DKM08_00550 NZ_QFYX01000001.1 Protein Homology CDS 130383 133640 . + 0 ID=cds-WP_003401912.1;Parent=gene-DKM08_RS00555;Dbxref=GenBank:WP_003401912.1;Name=WP_003401912.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214900.1;locus_tag=DKM08_RS00555;product=helix-turn-helix transcriptional regulator;protein_id=WP_003401912.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 133644 134975 . - . ID=gene-DKM08_RS00560;Name=DKM08_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00560;old_locus_tag=DKM08_00555 NZ_QFYX01000001.1 Protein Homology CDS 133644 134975 . - 0 ID=cds-WP_010950393.1;Parent=gene-DKM08_RS00560;Dbxref=GenBank:WP_010950393.1;Name=WP_010950393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287807.1;locus_tag=DKM08_RS00560;product=PPE family protein;protein_id=WP_010950393.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 135309 136568 . + . ID=gene-DKM08_RS00570;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=DKM08_RS00570;old_locus_tag=DKM08_00565 NZ_QFYX01000001.1 Protein Homology CDS 135309 136568 . + 0 ID=cds-WP_010950394.1;Parent=gene-DKM08_RS00570;Dbxref=GenBank:WP_010950394.1;Name=WP_010950394.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524,GO:0016742;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA,hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214903.1;locus_tag=DKM08_RS00570;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_010950394.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 136565 136987 . + . ID=gene-DKM08_RS00575;Name=DKM08_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00575;old_locus_tag=DKM08_00570 NZ_QFYX01000001.1 Protein Homology CDS 136565 136987 . + 0 ID=cds-WP_003401921.1;Parent=gene-DKM08_RS00575;Dbxref=GenBank:WP_003401921.1;Name=WP_003401921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214904.1;locus_tag=DKM08_RS00575;product=rhodanese-like domain-containing protein;protein_id=WP_003401921.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 136984 138204 . + . ID=gene-DKM08_RS00580;Name=metZ;gbkey=Gene;gene=metZ;gene_biotype=protein_coding;locus_tag=DKM08_RS00580;old_locus_tag=DKM08_00575 NZ_QFYX01000001.1 Protein Homology CDS 136984 138204 . + 0 ID=cds-WP_003401927.1;Parent=gene-DKM08_RS00580;Dbxref=GenBank:WP_003401927.1;Name=WP_003401927.1;gbkey=CDS;gene=metZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214905.1;locus_tag=DKM08_RS00580;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_003401927.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 138201 139613 . - . ID=gene-DKM08_RS00585;Name=ndhA;gbkey=Gene;gene=ndhA;gene_biotype=protein_coding;locus_tag=DKM08_RS00585;old_locus_tag=DKM08_00580 NZ_QFYX01000001.1 Protein Homology CDS 138201 139613 . - 0 ID=cds-WP_010950395.1;Parent=gene-DKM08_RS00585;Dbxref=GenBank:WP_010950395.1;Name=WP_010950395.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndhA;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214906.1;locus_tag=DKM08_RS00585;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_010950395.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 139888 141080 . + . ID=gene-DKM08_RS00590;Name=DKM08_RS00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS00590;old_locus_tag=DKM08_00585;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 139888 141080 . + 0 ID=cds-DKM08_RS00590;Parent=gene-DKM08_RS00590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=DKM08_RS00590;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 141096 141815 . - . ID=gene-DKM08_RS00595;Name=DKM08_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00595;old_locus_tag=DKM08_00590 NZ_QFYX01000001.1 Protein Homology CDS 141096 141815 . - 0 ID=cds-WP_003401942.1;Parent=gene-DKM08_RS00595;Dbxref=GenBank:WP_003401942.1;Name=WP_003401942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214908.1;locus_tag=DKM08_RS00595;product=hyaluronidase/chondrosulfatase;protein_id=WP_003401942.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 141914 142318 . + . ID=gene-DKM08_RS00600;Name=DKM08_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00600;old_locus_tag=DKM08_00595 NZ_QFYX01000001.1 Protein Homology CDS 141914 142318 . + 0 ID=cds-WP_003401944.1;Parent=gene-DKM08_RS00600;Dbxref=GenBank:WP_003401944.1;Name=WP_003401944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214909.1;locus_tag=DKM08_RS00600;product=hypothetical protein;protein_id=WP_003401944.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 142324 142716 . + . ID=gene-DKM08_RS00605;Name=DKM08_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00605;old_locus_tag=DKM08_00600 NZ_QFYX01000001.1 Protein Homology CDS 142324 142716 . + 0 ID=cds-WP_003401950.1;Parent=gene-DKM08_RS00605;Dbxref=GenBank:WP_003401950.1;Name=WP_003401950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214910.1;locus_tag=DKM08_RS00605;product=hypothetical protein;protein_id=WP_003401950.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 142790 143158 . + . ID=gene-DKM08_RS00610;Name=DKM08_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00610;old_locus_tag=DKM08_00605 NZ_QFYX01000001.1 Protein Homology CDS 142790 143158 . + 0 ID=cds-WP_003401960.1;Parent=gene-DKM08_RS00610;Dbxref=GenBank:WP_003401960.1;Name=WP_003401960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712350.1;locus_tag=DKM08_RS00610;product=hypothetical protein;protein_id=WP_003401960.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 143368 143616 . + . ID=gene-DKM08_RS00620;Name=DKM08_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00620;old_locus_tag=DKM08_00615 NZ_QFYX01000001.1 Protein Homology CDS 143368 143616 . + 0 ID=cds-WP_003898430.1;Parent=gene-DKM08_RS00620;Dbxref=GenBank:WP_003898430.1;Name=WP_003898430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837048.2;locus_tag=DKM08_RS00620;product=hypothetical protein;protein_id=WP_003898430.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 143653 144294 . - . ID=gene-DKM08_RS00625;Name=DKM08_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00625;old_locus_tag=DKM08_00620 NZ_QFYX01000001.1 Protein Homology CDS 143653 144294 . - 0 ID=cds-WP_003401963.1;Parent=gene-DKM08_RS00625;Dbxref=GenBank:WP_003401963.1;Name=WP_003401963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214912.1;locus_tag=DKM08_RS00625;product=hypothetical protein;protein_id=WP_003401963.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 144301 145530 . - . ID=gene-DKM08_RS00630;Name=lpqK;gbkey=Gene;gene=lpqK;gene_biotype=protein_coding;locus_tag=DKM08_RS00630;old_locus_tag=DKM08_00625 NZ_QFYX01000001.1 Protein Homology CDS 144301 145530 . - 0 ID=cds-WP_003898432.1;Parent=gene-DKM08_RS00630;Dbxref=GenBank:WP_003898432.1;Name=WP_003898432.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lpqK;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214913.1;locus_tag=DKM08_RS00630;product=serine hydrolase domain-containing protein;protein_id=WP_003898432.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 145540 146727 . - . ID=gene-DKM08_RS00635;Name=DKM08_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00635;old_locus_tag=DKM08_00630 NZ_QFYX01000001.1 Protein Homology CDS 145540 146727 . - 0 ID=cds-WP_003401972.1;Parent=gene-DKM08_RS00635;Dbxref=GenBank:WP_003401972.1;Name=WP_003401972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214914.1;locus_tag=DKM08_RS00635;product=acyl-CoA dehydrogenase;protein_id=WP_003401972.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 146763 147134 . + . ID=gene-DKM08_RS00640;Name=DKM08_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00640;old_locus_tag=DKM08_00635 NZ_QFYX01000001.1 Protein Homology CDS 146763 147134 . + 0 ID=cds-WP_003401978.1;Parent=gene-DKM08_RS00640;Dbxref=GenBank:WP_003401978.1;Name=WP_003401978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214915.1;locus_tag=DKM08_RS00640;product=DUF3054 domain-containing protein;protein_id=WP_003401978.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 147329 150204 . - . ID=gene-DKM08_RS21450;Name=mmpL1;gbkey=Gene;gene=mmpL1;gene_biotype=pseudogene;locus_tag=DKM08_RS21450;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 147329 150204 . - 0 ID=cds-DKM08_RS21450;Parent=gene-DKM08_RS21450;Note=frameshifted;gbkey=CDS;gene=mmpL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214916.1;locus_tag=DKM08_RS21450;product=RND transporter MmpL1;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 150201 150629 . - . ID=gene-DKM08_RS00655;Name=DKM08_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00655;old_locus_tag=DKM08_00650 NZ_QFYX01000001.1 Protein Homology CDS 150201 150629 . - 0 ID=cds-WP_003402074.1;Parent=gene-DKM08_RS00655;Dbxref=GenBank:WP_003402074.1;Name=WP_003402074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214917.1;locus_tag=DKM08_RS00655;product=MmpS family protein;protein_id=WP_003402074.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 150950 152707 . + . ID=gene-DKM08_RS00660;Name=fadD30;gbkey=Gene;gene=fadD30;gene_biotype=protein_coding;gene_synonym=faaL30;locus_tag=DKM08_RS00660;old_locus_tag=DKM08_00655 NZ_QFYX01000001.1 Protein Homology CDS 150950 152707 . + 0 ID=cds-WP_003402078.1;Parent=gene-DKM08_RS00660;Dbxref=GenBank:WP_003402078.1;Name=WP_003402078.1;gbkey=CDS;gene=fadD30;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900139.1;locus_tag=DKM08_RS00660;product=fatty-acid--AMP ligase FAAL30/FadD30;protein_id=WP_003402078.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 152704 156913 . + . ID=gene-DKM08_RS00670;Name=DKM08_RS00670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS00670;old_locus_tag=DKM08_00665;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 152704 156913 . + 0 ID=cds-DKM08_RS00670;Parent=gene-DKM08_RS00670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402080.1;locus_tag=DKM08_RS00670;product=type I polyketide synthase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 156861 157619 . - . ID=gene-DKM08_RS00675;Name=DKM08_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00675;old_locus_tag=DKM08_00670 NZ_QFYX01000001.1 Protein Homology CDS 156861 157619 . - 0 ID=cds-WP_003911199.1;Parent=gene-DKM08_RS00675;Dbxref=GenBank:WP_003911199.1;Name=WP_003911199.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289016.1;locus_tag=DKM08_RS00675;product=MBL fold metallo-hydrolase;protein_id=WP_003911199.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 157757 158767 . + . ID=gene-DKM08_RS00680;Name=fgd;gbkey=Gene;gene=fgd;gene_biotype=protein_coding;locus_tag=DKM08_RS00680;old_locus_tag=DKM08_00675 NZ_QFYX01000001.1 Protein Homology CDS 157757 158767 . + 0 ID=cds-WP_003898438.1;Parent=gene-DKM08_RS00680;Dbxref=GenBank:WP_003898438.1;Name=WP_003898438.1;Ontology_term=GO:0006007,GO:0016614,GO:0070967;gbkey=CDS;gene=fgd;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,coenzyme F420 binding|0070967||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214921.1;locus_tag=DKM08_RS00680;product=glucose-6-phosphate dehydrogenase (coenzyme-F420);protein_id=WP_003898438.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 158760 160832 . + . ID=gene-DKM08_RS00685;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=DKM08_RS00685;old_locus_tag=DKM08_00680 NZ_QFYX01000001.1 Protein Homology CDS 158760 160832 . + 0 ID=cds-WP_003402089.1;Parent=gene-DKM08_RS00685;Dbxref=GenBank:WP_003402089.1;Name=WP_003402089.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214922.1;locus_tag=DKM08_RS00685;product=phosphate acetyltransferase;protein_id=WP_003402089.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 160825 161982 . + . ID=gene-DKM08_RS00690;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=DKM08_RS00690;old_locus_tag=DKM08_00685 NZ_QFYX01000001.1 Protein Homology CDS 160825 161982 . + 0 ID=cds-WP_003402097.1;Parent=gene-DKM08_RS00690;Dbxref=GenBank:WP_003402097.1;Name=WP_003402097.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;gene=ackA;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214923.1;locus_tag=DKM08_RS00690;product=acetate kinase;protein_id=WP_003402097.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 162036 164288 . - . ID=gene-DKM08_RS00695;Name=pknG;gbkey=Gene;gene=pknG;gene_biotype=protein_coding;locus_tag=DKM08_RS00695;old_locus_tag=DKM08_00690 NZ_QFYX01000001.1 Protein Homology CDS 162036 164288 . - 0 ID=cds-WP_003402100.1;Parent=gene-DKM08_RS00695;Dbxref=GenBank:WP_003402100.1;Name=WP_003402100.1;gbkey=CDS;gene=pknG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214924.1;locus_tag=DKM08_RS00695;product=serine/threonine protein kinase PknG;protein_id=WP_003402100.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 164288 165274 . - . ID=gene-DKM08_RS00700;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=DKM08_RS00700;old_locus_tag=DKM08_00695 NZ_QFYX01000001.1 Protein Homology CDS 164288 165274 . - 0 ID=cds-WP_003900142.1;Parent=gene-DKM08_RS00700;Dbxref=GenBank:WP_003900142.1;Name=WP_003900142.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214925.1;locus_tag=DKM08_RS00700;product=glutamate ABC transporter substrate-binding protein;protein_id=WP_003900142.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 165274 166593 . - . ID=gene-DKM08_RS00705;Name=glnX;gbkey=Gene;gene=glnX;gene_biotype=protein_coding;locus_tag=DKM08_RS00705;old_locus_tag=DKM08_00700 NZ_QFYX01000001.1 Protein Homology CDS 165274 166593 . - 0 ID=cds-WP_003402108.1;Parent=gene-DKM08_RS00705;Dbxref=GenBank:WP_003402108.1;Name=WP_003402108.1;gbkey=CDS;gene=glnX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214926.1;locus_tag=DKM08_RS00705;product=protein kinase G-activating protein GlnX;protein_id=WP_003402108.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 166720 167340 . + . ID=gene-DKM08_RS00710;Name=DKM08_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00710;old_locus_tag=DKM08_00705 NZ_QFYX01000001.1 Protein Homology CDS 166720 167340 . + 0 ID=cds-WP_003898441.1;Parent=gene-DKM08_RS00710;Dbxref=GenBank:WP_003898441.1;Name=WP_003898441.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898441.1;locus_tag=DKM08_RS00710;product=NUDIX hydrolase;protein_id=WP_003898441.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 167324 167992 . - . ID=gene-DKM08_RS00715;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=DKM08_RS00715;old_locus_tag=DKM08_00710 NZ_QFYX01000001.1 Protein Homology CDS 167324 167992 . - 0 ID=cds-WP_003402115.1;Parent=gene-DKM08_RS00715;Dbxref=GenBank:WP_003402115.1;Name=WP_003402115.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214928.1;locus_tag=DKM08_RS00715;product=thiamine phosphate synthase;protein_id=WP_003402115.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 168021 168131 . + . ID=id-NZ_QFYX01000001.1:168021..168131;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 168122 169144 . + . ID=gene-DKM08_RS00720;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=DKM08_RS00720;old_locus_tag=DKM08_00715 NZ_QFYX01000001.1 Protein Homology CDS 168122 169144 . + 0 ID=cds-WP_010950400.1;Parent=gene-DKM08_RS00720;Dbxref=GenBank:WP_010950400.1;Name=WP_010950400.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214929.1;locus_tag=DKM08_RS00720;product=glycine oxidase ThiO;protein_id=WP_010950400.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 169141 169347 . + . ID=gene-DKM08_RS00725;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=DKM08_RS00725;old_locus_tag=DKM08_00720 NZ_QFYX01000001.1 Protein Homology CDS 169141 169347 . + 0 ID=cds-WP_003402121.1;Parent=gene-DKM08_RS00725;Dbxref=GenBank:WP_003402121.1;Name=WP_003402121.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214930.1;locus_tag=DKM08_RS00725;product=sulfur carrier protein ThiS;protein_id=WP_003402121.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 169340 170098 . + . ID=gene-DKM08_RS00730;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=DKM08_RS00730;old_locus_tag=DKM08_00725 NZ_QFYX01000001.1 Protein Homology CDS 169340 170098 . + 0 ID=cds-WP_003402126.1;Parent=gene-DKM08_RS00730;Dbxref=GenBank:WP_003402126.1;Name=WP_003402126.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214931.1;locus_tag=DKM08_RS00730;product=thiazole synthase;protein_id=WP_003402126.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 170120 170272 . + . ID=gene-DKM08_RS00735;Name=DKM08_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00735;old_locus_tag=DKM08_00730 NZ_QFYX01000001.1 Protein Homology CDS 170120 170272 . + 0 ID=cds-WP_003402129.1;Parent=gene-DKM08_RS00735;Dbxref=GenBank:WP_003402129.1;Name=WP_003402129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402129.1;locus_tag=DKM08_RS00735;product=DUF2752 domain-containing protein;protein_id=WP_003402129.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 170470 171972 . + . ID=gene-DKM08_RS00740;Name=lpqL;gbkey=Gene;gene=lpqL;gene_biotype=protein_coding;locus_tag=DKM08_RS00740;old_locus_tag=DKM08_00735 NZ_QFYX01000001.1 Protein Homology CDS 170470 171972 . + 0 ID=cds-WP_003402133.1;Parent=gene-DKM08_RS00740;Dbxref=GenBank:WP_003402133.1;Name=WP_003402133.1;gbkey=CDS;gene=lpqL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214932.1;locus_tag=DKM08_RS00740;product=M28 family metallopeptidase;protein_id=WP_003402133.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 172060 173556 . + . ID=gene-DKM08_RS00745;Name=lpqM;gbkey=Gene;gene=lpqM;gene_biotype=protein_coding;locus_tag=DKM08_RS00745;old_locus_tag=DKM08_00740 NZ_QFYX01000001.1 Protein Homology CDS 172060 173556 . + 0 ID=cds-WP_003402135.1;Parent=gene-DKM08_RS00745;Dbxref=GenBank:WP_003402135.1;Name=WP_003402135.1;gbkey=CDS;gene=lpqM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214933.1;locus_tag=DKM08_RS00745;product=neutral zinc metallopeptidase;protein_id=WP_003402135.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 173535 173876 . - . ID=gene-DKM08_RS00750;Name=DKM08_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00750;old_locus_tag=DKM08_00745 NZ_QFYX01000001.1 Protein Homology CDS 173535 173876 . - 0 ID=cds-WP_003911201.1;Parent=gene-DKM08_RS00750;Dbxref=GenBank:WP_003911201.1;Name=WP_003911201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911201.1;locus_tag=DKM08_RS00750;product=hypothetical protein;protein_id=WP_003911201.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 174106 174735 . - . ID=gene-DKM08_RS00755;Name=DKM08_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00755;old_locus_tag=DKM08_00750 NZ_QFYX01000001.1 Protein Homology CDS 174106 174735 . - 0 ID=cds-WP_003402145.1;Parent=gene-DKM08_RS00755;Dbxref=GenBank:WP_003402145.1;Name=WP_003402145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214935.1;locus_tag=DKM08_RS00755;product=alpha/beta family hydrolase;protein_id=WP_003402145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 174732 175559 . - . ID=gene-DKM08_RS00760;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=DKM08_RS00760;old_locus_tag=DKM08_00755 NZ_QFYX01000001.1 Protein Homology CDS 174732 175559 . - 0 ID=cds-WP_003898443.1;Parent=gene-DKM08_RS00760;Dbxref=GenBank:WP_003898443.1;Name=WP_003898443.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898443.1;locus_tag=DKM08_RS00760;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_003898443.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 175556 177199 . - . ID=gene-DKM08_RS00765;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=DKM08_RS00765;old_locus_tag=DKM08_00760 NZ_QFYX01000001.1 Protein Homology CDS 175556 177199 . - 0 ID=cds-WP_003900143.1;Parent=gene-DKM08_RS00765;Dbxref=GenBank:WP_003900143.1;Name=WP_003900143.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214937.1;locus_tag=DKM08_RS00765;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_003900143.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 177190 177300 . - . ID=id-NZ_QFYX01000001.1:177190..177300;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 177351 177626 . - . ID=gene-DKM08_RS00770;Name=DKM08_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00770;old_locus_tag=DKM08_00765 NZ_QFYX01000001.1 Protein Homology CDS 177351 177626 . - 0 ID=cds-WP_003402157.1;Parent=gene-DKM08_RS00770;Dbxref=GenBank:WP_003402157.1;Name=WP_003402157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214938.1;locus_tag=DKM08_RS00770;product=hypothetical protein;protein_id=WP_003402157.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 177525 177767 . + . ID=gene-DKM08_RS22460;Name=DKM08_RS22460;end_range=177767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22460;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 177525 177767 . + 0 ID=cds-DKM08_RS22460;Parent=gene-DKM08_RS22460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=177767,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040653.1;locus_tag=DKM08_RS22460;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 177676 182295 . - . ID=gene-DKM08_RS22465;Name=ctpH;gbkey=Gene;gene=ctpH;gene_biotype=protein_coding;locus_tag=DKM08_RS22465;old_locus_tag=DKM08_00770 NZ_QFYX01000001.1 Protein Homology CDS 177676 182295 . - 0 ID=cds-WP_023349442.1;Parent=gene-DKM08_RS22465;Dbxref=GenBank:WP_023349442.1;Name=WP_023349442.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpH;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214939.1;locus_tag=DKM08_RS22465;product=cation-translocating P-type ATPase;protein_id=WP_023349442.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 182347 182790 . - . ID=gene-DKM08_RS00780;Name=DKM08_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00780;old_locus_tag=DKM08_00775 NZ_QFYX01000001.1 Protein Homology CDS 182347 182790 . - 0 ID=cds-WP_003402171.1;Parent=gene-DKM08_RS00780;Dbxref=GenBank:WP_003402171.1;Name=WP_003402171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214940.1;locus_tag=DKM08_RS00780;product=hypothetical protein;protein_id=WP_003402171.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 182991 183797 . - . ID=gene-DKM08_RS00785;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=DKM08_RS00785;old_locus_tag=DKM08_00780 NZ_QFYX01000001.1 Protein Homology CDS 182991 183797 . - 0 ID=cds-WP_031351974.1;Parent=gene-DKM08_RS00785;Dbxref=GenBank:WP_031351974.1;Name=WP_031351974.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;gene=xthA;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571494.1;locus_tag=DKM08_RS00785;product=exodeoxyribonuclease III;protein_id=WP_031351974.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 183869 184777 . - . ID=gene-DKM08_RS00790;Name=DKM08_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00790;old_locus_tag=DKM08_00785 NZ_QFYX01000001.1 Protein Homology CDS 183869 184777 . - 0 ID=cds-WP_003402179.1;Parent=gene-DKM08_RS00790;Dbxref=GenBank:WP_003402179.1;Name=WP_003402179.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214942.1;locus_tag=DKM08_RS00790;product=N-acetylglutamate synthase%2C CG3035 family;protein_id=WP_003402179.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 184777 185370 . - . ID=gene-DKM08_RS00795;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=DKM08_RS00795;old_locus_tag=DKM08_00790 NZ_QFYX01000001.1 Protein Homology CDS 184777 185370 . - 0 ID=cds-WP_003402185.1;Parent=gene-DKM08_RS00795;Dbxref=GenBank:WP_003402185.1;Name=WP_003402185.1;Ontology_term=GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214943.1;locus_tag=DKM08_RS00795;product=peptide deformylase;protein_id=WP_003402185.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 185707 186015 . + . ID=gene-DKM08_RS00800;Name=DKM08_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00800;old_locus_tag=DKM08_00795 NZ_QFYX01000001.1 Protein Homology CDS 185707 186015 . + 0 ID=cds-WP_003402188.1;Parent=gene-DKM08_RS00800;Dbxref=GenBank:WP_003402188.1;Name=WP_003402188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214944.1;locus_tag=DKM08_RS00800;product=DUF3263 domain-containing protein;protein_id=WP_003402188.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 186068 186541 . + . ID=gene-DKM08_RS00805;Name=DKM08_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00805;old_locus_tag=DKM08_00800 NZ_QFYX01000001.1 Protein Homology CDS 186068 186541 . + 0 ID=cds-WP_031652141.1;Parent=gene-DKM08_RS00805;Dbxref=GenBank:WP_031652141.1;Name=WP_031652141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873789.1;locus_tag=DKM08_RS00805;product=LytR C-terminal domain-containing protein;protein_id=WP_031652141.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 186574 187296 . + . ID=gene-DKM08_RS00810;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=DKM08_RS00810;old_locus_tag=DKM08_00805 NZ_QFYX01000001.1 Protein Homology CDS 186574 187296 . + 0 ID=cds-WP_003402198.1;Parent=gene-DKM08_RS00810;Dbxref=GenBank:WP_003402198.1;Name=WP_003402198.1;Ontology_term=GO:0004784,GO:0005507;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA,copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214946.1;locus_tag=DKM08_RS00810;product=superoxide dismutase[Cu-Zn];protein_id=WP_003402198.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 187298 188428 . + . ID=gene-DKM08_RS00815;Name=DKM08_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00815;old_locus_tag=DKM08_00810 NZ_QFYX01000001.1 Protein Homology CDS 187298 188428 . + 0 ID=cds-WP_003900145.1;Parent=gene-DKM08_RS00815;Dbxref=GenBank:WP_003900145.1;Name=WP_003900145.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214947.1;locus_tag=DKM08_RS00815;product=glutamate--cysteine ligase;protein_id=WP_003900145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 188488 189141 . + . ID=gene-DKM08_RS00820;Name=DKM08_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00820;old_locus_tag=DKM08_00815 NZ_QFYX01000001.1 Protein Homology CDS 188488 189141 . + 0 ID=cds-WP_003402203.1;Parent=gene-DKM08_RS00820;Dbxref=GenBank:WP_003402203.1;Name=WP_003402203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214948.1;locus_tag=DKM08_RS00820;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_003402203.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 189321 191507 . - . ID=gene-DKM08_RS00825;Name=DKM08_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00825;old_locus_tag=DKM08_00820 NZ_QFYX01000001.1 Protein Homology CDS 189321 191507 . - 0 ID=cds-WP_003402206.1;Parent=gene-DKM08_RS00825;Dbxref=GenBank:WP_003402206.1;Name=WP_003402206.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214949.1;locus_tag=DKM08_RS00825;product=AAA family ATPase;protein_id=WP_003402206.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 191504 192364 . - . ID=gene-DKM08_RS00830;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=DKM08_RS00830;old_locus_tag=DKM08_00825 NZ_QFYX01000001.1 Protein Homology CDS 191504 192364 . - 0 ID=cds-WP_003402213.1;Parent=gene-DKM08_RS00830;Dbxref=GenBank:WP_003402213.1;Name=WP_003402213.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214950.1;locus_tag=DKM08_RS00830;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_003402213.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 192361 193056 . - . ID=gene-DKM08_RS00835;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=DKM08_RS00835;old_locus_tag=DKM08_00830 NZ_QFYX01000001.1 Protein Homology CDS 192361 193056 . - 0 ID=cds-WP_003402216.1;Parent=gene-DKM08_RS00835;Dbxref=GenBank:WP_003402216.1;Name=WP_003402216.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214951.1;locus_tag=DKM08_RS00835;product=phosphatidylserine decarboxylase;protein_id=WP_003402216.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 193117 194334 . - . ID=gene-DKM08_RS00840;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=DKM08_RS00840;old_locus_tag=DKM08_00835 NZ_QFYX01000001.1 Protein Homology CDS 193117 194334 . - 0 ID=cds-WP_003402217.1;Parent=gene-DKM08_RS00840;Dbxref=GenBank:WP_003402217.1;Name=WP_003402217.1;Ontology_term=GO:0006777,GO:0061599,GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177725.1;locus_tag=DKM08_RS00840;product=gephyrin-like molybdotransferase Glp;protein_id=WP_003402217.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 194353 195288 . - . ID=gene-DKM08_RS00845;Name=DKM08_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00845;old_locus_tag=DKM08_00840 NZ_QFYX01000001.1 Protein Homology CDS 194353 195288 . - 0 ID=cds-WP_003402219.1;Parent=gene-DKM08_RS00845;Dbxref=GenBank:WP_003402219.1;Name=WP_003402219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214953.1;locus_tag=DKM08_RS00845;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003402219.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 195582 197204 . + . ID=gene-DKM08_RS00850;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=DKM08_RS00850;old_locus_tag=DKM08_00845 NZ_QFYX01000001.1 Protein Homology CDS 195582 197204 . + 0 ID=cds-WP_003402236.1;Parent=gene-DKM08_RS00850;Dbxref=GenBank:WP_003402236.1;Name=WP_003402236.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214954.1;locus_tag=DKM08_RS00850;product=chaperonin GroEL;protein_id=WP_003402236.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 197270 197698 . - . ID=gene-DKM08_RS00855;Name=DKM08_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00855;old_locus_tag=DKM08_00850 NZ_QFYX01000001.1 Protein Homology CDS 197270 197698 . - 0 ID=cds-WP_003402238.1;Parent=gene-DKM08_RS00855;Dbxref=GenBank:WP_003402238.1;Name=WP_003402238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214955.1;locus_tag=DKM08_RS00855;product=hypothetical protein;protein_id=WP_003402238.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 197725 199137 . - . ID=gene-DKM08_RS00860;Name=DKM08_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00860;old_locus_tag=DKM08_00855 NZ_QFYX01000001.1 Protein Homology CDS 197725 199137 . - 0 ID=cds-WP_003900929.1;Parent=gene-DKM08_RS00860;Dbxref=GenBank:WP_003900929.1;Name=WP_003900929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177726.2;locus_tag=DKM08_RS00860;product=PPE family protein;protein_id=WP_003900929.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 199370 199885 . + . ID=gene-DKM08_RS00865;Name=DKM08_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00865;old_locus_tag=DKM08_00860 NZ_QFYX01000001.1 Protein Homology CDS 199370 199885 . + 0 ID=cds-WP_003402240.1;Parent=gene-DKM08_RS00865;Dbxref=GenBank:WP_003402240.1;Name=WP_003402240.1;Ontology_term=GO:0010127,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214957.1;locus_tag=DKM08_RS00865;product=mycothiol transferase;protein_id=WP_003402240.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 200065 200763 . - . ID=gene-DKM08_RS00870;Name=rskA;gbkey=Gene;gene=rskA;gene_biotype=protein_coding;locus_tag=DKM08_RS00870;old_locus_tag=DKM08_00865 NZ_QFYX01000001.1 Protein Homology CDS 200065 200763 . - 0 ID=cds-WP_010950404.1;Parent=gene-DKM08_RS00870;Dbxref=GenBank:WP_010950404.1;Name=WP_010950404.1;gbkey=CDS;gene=rskA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214958.1;locus_tag=DKM08_RS00870;product=anti-sigma-K factor RskA;protein_id=WP_010950404.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 200807 201370 . - . ID=gene-DKM08_RS00875;Name=sigK;gbkey=Gene;gene=sigK;gene_biotype=protein_coding;locus_tag=DKM08_RS00875;old_locus_tag=DKM08_00870 NZ_QFYX01000001.1 Protein Homology CDS 200807 201370 . - 0 ID=cds-WP_003402246.1;Parent=gene-DKM08_RS00875;Dbxref=GenBank:WP_003402246.1;Name=WP_003402246.1;gbkey=CDS;gene=sigK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214959.1;locus_tag=DKM08_RS00875;product=sigma-70 family RNA polymerase sigma factor SigK;protein_id=WP_003402246.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 201419 202189 . - . ID=gene-DKM08_RS00880;Name=DKM08_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00880;old_locus_tag=DKM08_00875 NZ_QFYX01000001.1 Protein Homology CDS 201419 202189 . - 0 ID=cds-WP_003402248.1;Parent=gene-DKM08_RS00880;Dbxref=GenBank:WP_003402248.1;Name=WP_003402248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214960.1;locus_tag=DKM08_RS00880;product=DUF1295 domain-containing protein;protein_id=WP_003402248.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 202198 203481 . - . ID=gene-DKM08_RS00885;Name=DKM08_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00885;old_locus_tag=DKM08_00880 NZ_QFYX01000001.1 Protein Homology CDS 202198 203481 . - 0 ID=cds-WP_003402250.1;Parent=gene-DKM08_RS00885;Dbxref=GenBank:WP_003402250.1;Name=WP_003402250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214961.1;locus_tag=DKM08_RS00885;product=class I SAM-dependent methyltransferase;protein_id=WP_003402250.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 203478 204209 . - . ID=gene-DKM08_RS00890;Name=DKM08_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00890;old_locus_tag=DKM08_00885 NZ_QFYX01000001.1 Protein Homology CDS 203478 204209 . - 0 ID=cds-WP_003900930.1;Parent=gene-DKM08_RS00890;Dbxref=GenBank:WP_003900930.1;Name=WP_003900930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900930.1;locus_tag=DKM08_RS00890;product=DUF1365 domain-containing protein;protein_id=WP_003900930.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 204203 205522 . - . ID=gene-DKM08_RS00895;Name=DKM08_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00895;old_locus_tag=DKM08_00890 NZ_QFYX01000001.1 Protein Homology CDS 204203 205522 . - 0 ID=cds-WP_003402268.1;Parent=gene-DKM08_RS00895;Dbxref=GenBank:WP_003402268.1;Name=WP_003402268.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214963.1;locus_tag=DKM08_RS00895;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003402268.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 205562 208465 . - . ID=gene-DKM08_RS00900;Name=mmpL4;gbkey=Gene;gene=mmpL4;gene_biotype=protein_coding;locus_tag=DKM08_RS00900;old_locus_tag=DKM08_00895 NZ_QFYX01000001.1 Protein Homology CDS 205562 208465 . - 0 ID=cds-WP_003898458.1;Parent=gene-DKM08_RS00900;Dbxref=GenBank:WP_003898458.1;Name=WP_003898458.1;gbkey=CDS;gene=mmpL4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898458.1;locus_tag=DKM08_RS00900;product=siderophore RND transporter MmpL4;protein_id=WP_003898458.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 208462 208884 . - . ID=gene-DKM08_RS00905;Name=mmpS4;gbkey=Gene;gene=mmpS4;gene_biotype=protein_coding;locus_tag=DKM08_RS00905;old_locus_tag=DKM08_00900 NZ_QFYX01000001.1 Protein Homology CDS 208462 208884 . - 0 ID=cds-WP_003402272.1;Parent=gene-DKM08_RS00905;Dbxref=GenBank:WP_003402272.1;Name=WP_003402272.1;gbkey=CDS;gene=mmpS4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214965.1;locus_tag=DKM08_RS00905;product=siderophore RND transporter accessory protein MmpS4;protein_id=WP_003402272.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 209116 209826 . + . ID=gene-DKM08_RS00910;Name=DKM08_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00910;old_locus_tag=DKM08_00905 NZ_QFYX01000001.1 Protein Homology CDS 209116 209826 . + 0 ID=cds-WP_003402282.1;Parent=gene-DKM08_RS00910;Dbxref=GenBank:WP_003402282.1;Name=WP_003402282.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214966.1;locus_tag=DKM08_RS00910;product=TetR family transcriptional regulator;protein_id=WP_003402282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 210148 211704 . + . ID=gene-DKM08_RS00920;Name=DKM08_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00920;old_locus_tag=DKM08_00915 NZ_QFYX01000001.1 Protein Homology CDS 210148 211704 . + 0 ID=cds-WP_003402284.1;Parent=gene-DKM08_RS00920;Dbxref=GenBank:WP_003402284.1;Name=WP_003402284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177727.1;locus_tag=DKM08_RS00920;product=PPE family protein;protein_id=WP_003402284.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 211710 212033 . - . ID=gene-DKM08_RS21455;Name=DKM08_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21455 NZ_QFYX01000001.1 Protein Homology CDS 211710 212033 . - 0 ID=cds-WP_003898461.1;Parent=gene-DKM08_RS21455;Dbxref=GenBank:WP_003898461.1;Name=WP_003898461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898461.1;locus_tag=DKM08_RS21455;product=hypothetical protein;protein_id=WP_003898461.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 212349 212795 . - . ID=gene-DKM08_RS00930;Name=DKM08_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00930;old_locus_tag=DKM08_00925 NZ_QFYX01000001.1 Protein Homology CDS 212349 212795 . - 0 ID=cds-WP_003402286.1;Parent=gene-DKM08_RS00930;Dbxref=GenBank:WP_003402286.1;Name=WP_003402286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214969.1;locus_tag=DKM08_RS00930;product=DUF5078 domain-containing protein;protein_id=WP_003402286.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 212863 213777 . - . ID=gene-DKM08_RS00935;Name=DKM08_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00935;old_locus_tag=DKM08_00930 NZ_QFYX01000001.1 Protein Homology CDS 212863 213777 . - 0 ID=cds-WP_003898463.1;Parent=gene-DKM08_RS00935;Dbxref=GenBank:WP_003898463.1;Name=WP_003898463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214970.1;locus_tag=DKM08_RS00935;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003898463.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 214009 214331 . - . ID=gene-DKM08_RS00940;Name=DKM08_RS00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS00940;old_locus_tag=DKM08_00935;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 214009 214331 . - 0 ID=cds-DKM08_RS00940;Parent=gene-DKM08_RS00940;Note=frameshifted;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013831006.1;locus_tag=DKM08_RS00940;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 214318 214491 . - . ID=gene-DKM08_RS00945;Name=DKM08_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00945;old_locus_tag=DKM08_00940 NZ_QFYX01000001.1 Protein Homology CDS 214318 214491 . - 0 ID=cds-WP_003903009.1;Parent=gene-DKM08_RS00945;Dbxref=GenBank:WP_003903009.1;Name=WP_003903009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409102.1;locus_tag=DKM08_RS00945;product=antitoxin MazE;protein_id=WP_003903009.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 214560 216581 . - . ID=gene-DKM08_RS00950;Name=DKM08_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00950;old_locus_tag=DKM08_00945 NZ_QFYX01000001.1 Protein Homology CDS 214560 216581 . - 0 ID=cds-WP_003402292.1;Parent=gene-DKM08_RS00950;Dbxref=GenBank:WP_003402292.1;Name=WP_003402292.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214971.1;locus_tag=DKM08_RS00950;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_003402292.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 216649 218172 . + . ID=gene-DKM08_RS00955;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=DKM08_RS00955;old_locus_tag=DKM08_00950 NZ_QFYX01000001.1 Protein Homology CDS 216649 218172 . + 0 ID=cds-WP_003402294.1;Parent=gene-DKM08_RS00955;Dbxref=GenBank:WP_003402294.1;Name=WP_003402294.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214972.1;locus_tag=DKM08_RS00955;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_003402294.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 218172 218663 . + . ID=gene-DKM08_RS00960;Name=DKM08_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00960;old_locus_tag=DKM08_00955 NZ_QFYX01000001.1 Protein Homology CDS 218172 218663 . + 0 ID=cds-WP_003898464.1;Parent=gene-DKM08_RS00960;Dbxref=GenBank:WP_003898464.1;Name=WP_003898464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214973.1;locus_tag=DKM08_RS00960;product=DUF779 domain-containing protein;protein_id=WP_003898464.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 218684 218962 . + . ID=gene-DKM08_RS00965;Name=DKM08_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00965;old_locus_tag=DKM08_00960 NZ_QFYX01000001.1 Protein Homology CDS 218684 218962 . + 0 ID=cds-WP_003898465.1;Parent=gene-DKM08_RS00965;Dbxref=GenBank:WP_003898465.1;Name=WP_003898465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015626659.1;locus_tag=DKM08_RS00965;product=putative holin;protein_id=WP_003898465.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 218955 219524 . + . ID=gene-DKM08_RS00970;Name=DKM08_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00970;old_locus_tag=DKM08_00965 NZ_QFYX01000001.1 Protein Homology CDS 218955 219524 . + 0 ID=cds-WP_003898466.1;Parent=gene-DKM08_RS00970;Dbxref=GenBank:WP_003898466.1;Name=WP_003898466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898466.1;locus_tag=DKM08_RS00970;product=hypothetical protein;protein_id=WP_003898466.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 219588 220982 . + . ID=gene-DKM08_RS00975;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=DKM08_RS00975;old_locus_tag=DKM08_00970 NZ_QFYX01000001.1 Protein Homology CDS 219588 220982 . + 0 ID=cds-WP_003402301.1;Parent=gene-DKM08_RS00975;Dbxref=GenBank:WP_003402301.1;Name=WP_003402301.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214976.1;locus_tag=DKM08_RS00975;product=dihydrolipoyl dehydrogenase;protein_id=WP_003402301.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 220990 221283 . + . ID=gene-DKM08_RS00980;Name=DKM08_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00980;old_locus_tag=DKM08_00975 NZ_QFYX01000001.1 Protein Homology CDS 220990 221283 . + 0 ID=cds-WP_003402304.1;Parent=gene-DKM08_RS00980;Dbxref=GenBank:WP_003402304.1;Name=WP_003402304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214977.1;locus_tag=DKM08_RS00980;product=hypothetical protein;protein_id=WP_003402304.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 221287 221859 . - . ID=gene-DKM08_RS00985;Name=DKM08_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00985;old_locus_tag=DKM08_00980 NZ_QFYX01000001.1 Protein Homology CDS 221287 221859 . - 0 ID=cds-WP_003402306.1;Parent=gene-DKM08_RS00985;Dbxref=GenBank:WP_003402306.1;Name=WP_003402306.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214978.1;locus_tag=DKM08_RS00985;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003402306.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 221856 223280 . - . ID=gene-DKM08_RS00990;Name=ramB;gbkey=Gene;gene=ramB;gene_biotype=protein_coding;locus_tag=DKM08_RS00990;old_locus_tag=DKM08_00985 NZ_QFYX01000001.1 Protein Homology CDS 221856 223280 . - 0 ID=cds-WP_010950406.1;Parent=gene-DKM08_RS00990;Dbxref=GenBank:WP_010950406.1;Name=WP_010950406.1;gbkey=CDS;gene=ramB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214979.1;locus_tag=DKM08_RS00990;product=acetate metabolism transcriptional regulator RamB;protein_id=WP_010950406.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 223432 224226 . + . ID=gene-DKM08_RS00995;Name=DKM08_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS00995;old_locus_tag=DKM08_00990 NZ_QFYX01000001.1 Protein Homology CDS 223432 224226 . + 0 ID=cds-WP_003402311.1;Parent=gene-DKM08_RS00995;Dbxref=GenBank:WP_003402311.1;Name=WP_003402311.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214980.1;locus_tag=DKM08_RS00995;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003402311.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 224501 225787 . + . ID=gene-DKM08_RS01000;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=DKM08_RS01000;old_locus_tag=DKM08_00995 NZ_QFYX01000001.1 Protein Homology CDS 224501 225787 . + 0 ID=cds-WP_023349443.1;Parent=gene-DKM08_RS01000;Dbxref=GenBank:WP_023349443.1;Name=WP_023349443.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177728.1;locus_tag=DKM08_RS01000;product=isocitrate lyase;protein_id=WP_023349443.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 225869 226729 . + . ID=gene-DKM08_RS01005;Name=fadB2;gbkey=Gene;gene=fadB2;gene_biotype=protein_coding;locus_tag=DKM08_RS01005;old_locus_tag=DKM08_01000 NZ_QFYX01000001.1 Protein Homology CDS 225869 226729 . + 0 ID=cds-WP_003402318.1;Parent=gene-DKM08_RS01005;Dbxref=GenBank:WP_003402318.1;Name=WP_003402318.1;gbkey=CDS;gene=fadB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214982.1;locus_tag=DKM08_RS01005;product=3-hydroxybutyryl-CoA dehydrogenase FadB2;protein_id=WP_003402318.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 226862 227722 . + . ID=gene-DKM08_RS01010;Name=umaA;gbkey=Gene;gene=umaA;gene_biotype=protein_coding;locus_tag=DKM08_RS01010;old_locus_tag=DKM08_01005 NZ_QFYX01000001.1 Protein Homology CDS 226862 227722 . + 0 ID=cds-WP_003900153.1;Parent=gene-DKM08_RS01010;Dbxref=GenBank:WP_003900153.1;Name=WP_003900153.1;gbkey=CDS;gene=umaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177729.1;locus_tag=DKM08_RS01010;product=SAM-dependent methyltransferase UmaA;protein_id=WP_003900153.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 227822 228685 . - . ID=gene-DKM08_RS01015;Name=pcaA;gbkey=Gene;gene=pcaA;gene_biotype=protein_coding;locus_tag=DKM08_RS01015;old_locus_tag=DKM08_01010 NZ_QFYX01000001.1 Protein Homology CDS 227822 228685 . - 0 ID=cds-WP_003402323.1;Parent=gene-DKM08_RS01015;Dbxref=GenBank:WP_003402323.1;Name=WP_003402323.1;gbkey=CDS;gene=pcaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177730.1;locus_tag=DKM08_RS01015;product=cyclopropane mycolic acid synthase PcaA;protein_id=WP_003402323.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 228828 229268 . - . ID=gene-DKM08_RS01020;Name=DKM08_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01020;old_locus_tag=DKM08_01015 NZ_QFYX01000001.1 Protein Homology CDS 228828 229268 . - 0 ID=cds-WP_003898470.1;Parent=gene-DKM08_RS01020;Dbxref=GenBank:WP_003898470.1;Name=WP_003898470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177622.1;locus_tag=DKM08_RS01020;product=hypothetical protein;protein_id=WP_003898470.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 229199 229687 . - . ID=gene-DKM08_RS01025;Name=DKM08_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01025;old_locus_tag=DKM08_01020 NZ_QFYX01000001.1 Protein Homology CDS 229199 229687 . - 0 ID=cds-WP_003402327.1;Parent=gene-DKM08_RS01025;Dbxref=GenBank:WP_003402327.1;Name=WP_003402327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214985.1;locus_tag=DKM08_RS01025;product=hypothetical protein;protein_id=WP_003402327.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 229697 230401 . - . ID=gene-DKM08_RS01030;Name=DKM08_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01030;old_locus_tag=DKM08_01025 NZ_QFYX01000001.1 Protein Homology CDS 229697 230401 . - 0 ID=cds-WP_003402330.1;Parent=gene-DKM08_RS01030;Dbxref=GenBank:WP_003402330.1;Name=WP_003402330.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214986.1;locus_tag=DKM08_RS01030;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003402330.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 230538 231908 . + . ID=gene-DKM08_RS01035;Name=DKM08_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01035;old_locus_tag=DKM08_01030 NZ_QFYX01000001.1 Protein Homology CDS 230538 231908 . + 0 ID=cds-WP_003402332.1;Parent=gene-DKM08_RS01035;Dbxref=GenBank:WP_003402332.1;Name=WP_003402332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214987.2;locus_tag=DKM08_RS01035;product=DUF445 domain-containing protein;protein_id=WP_003402332.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 231995 232417 . + . ID=gene-DKM08_RS01040;Name=DKM08_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01040;old_locus_tag=DKM08_01035 NZ_QFYX01000001.1 Protein Homology CDS 231995 232417 . + 0 ID=cds-WP_003402335.1;Parent=gene-DKM08_RS01040;Dbxref=GenBank:WP_003402335.1;Name=WP_003402335.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214988.1;locus_tag=DKM08_RS01040;product=helix-turn-helix domain-containing protein;protein_id=WP_003402335.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 232771 233370 . + . ID=gene-DKM08_RS01045;Name=hbhA;gbkey=Gene;gene=hbhA;gene_biotype=protein_coding;locus_tag=DKM08_RS01045;old_locus_tag=DKM08_01040 NZ_QFYX01000001.1 Protein Homology CDS 232771 233370 . + 0 ID=cds-WP_003402339.1;Parent=gene-DKM08_RS01045;Dbxref=GenBank:WP_003402339.1;Name=WP_003402339.1;gbkey=CDS;gene=hbhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214989.1;locus_tag=DKM08_RS01045;product=heparin-binding hemagglutinin HbhA;protein_id=WP_003402339.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 233458 233745 . + . ID=gene-DKM08_RS01050;Name=DKM08_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01050;old_locus_tag=DKM08_01045 NZ_QFYX01000001.1 Protein Homology CDS 233458 233745 . + 0 ID=cds-WP_003898474.1;Parent=gene-DKM08_RS01050;Dbxref=GenBank:WP_003898474.1;Name=WP_003898474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898474.1;locus_tag=DKM08_RS01050;product=DUF2516 family protein;protein_id=WP_003898474.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 233750 234196 . + . ID=gene-DKM08_RS01055;Name=DKM08_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01055;old_locus_tag=DKM08_01050 NZ_QFYX01000001.1 Protein Homology CDS 233750 234196 . + 0 ID=cds-WP_003402344.1;Parent=gene-DKM08_RS01055;Dbxref=GenBank:WP_003402344.1;Name=WP_003402344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214991.1;locus_tag=DKM08_RS01055;product=DUF2599 domain-containing protein;protein_id=WP_003402344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 234196 234870 . + . ID=gene-DKM08_RS01060;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=DKM08_RS01060;old_locus_tag=DKM08_01055 NZ_QFYX01000001.1 Protein Homology CDS 234196 234870 . + 0 ID=cds-WP_003402347.1;Parent=gene-DKM08_RS01060;Dbxref=GenBank:WP_003402347.1;Name=WP_003402347.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214992.1;locus_tag=DKM08_RS01060;product=deoxyribose-phosphate aldolase;protein_id=WP_003402347.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 234895 235941 . - . ID=gene-DKM08_RS01065;Name=DKM08_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01065;old_locus_tag=DKM08_01060 NZ_QFYX01000001.1 Protein Homology CDS 234895 235941 . - 0 ID=cds-WP_003898475.1;Parent=gene-DKM08_RS01065;Dbxref=GenBank:WP_003898475.1;Name=WP_003898475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214993.1;locus_tag=DKM08_RS01065;product=DUF2993 domain-containing protein;protein_id=WP_003898475.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 235938 236780 . - . ID=gene-DKM08_RS01070;Name=DKM08_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01070;old_locus_tag=DKM08_01065 NZ_QFYX01000001.1 Protein Homology CDS 235938 236780 . - 0 ID=cds-WP_003402350.1;Parent=gene-DKM08_RS01070;Dbxref=GenBank:WP_003402350.1;Name=WP_003402350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214994.2;locus_tag=DKM08_RS01070;product=carbon-nitrogen hydrolase family protein;protein_id=WP_003402350.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 236906 237430 . - . ID=gene-DKM08_RS01075;Name=DKM08_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01075;old_locus_tag=DKM08_01070 NZ_QFYX01000001.1 Protein Homology CDS 236906 237430 . - 0 ID=cds-WP_003402351.1;Parent=gene-DKM08_RS01075;Dbxref=GenBank:WP_003402351.1;Name=WP_003402351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214995.1;locus_tag=DKM08_RS01075;product=DUF2505 domain-containing protein;protein_id=WP_003402351.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 237457 238566 . + . ID=gene-DKM08_RS01080;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=DKM08_RS01080;old_locus_tag=DKM08_01075 NZ_QFYX01000001.1 Protein Homology CDS 237457 238566 . + 0 ID=cds-WP_003402354.1;Parent=gene-DKM08_RS01080;Dbxref=GenBank:WP_003402354.1;Name=WP_003402354.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214996.1;locus_tag=DKM08_RS01080;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_003402354.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 238628 239983 . + . ID=gene-DKM08_RS01085;Name=ldtMt5;gbkey=Gene;gene=ldtMt5;gene_biotype=protein_coding;locus_tag=DKM08_RS01085;old_locus_tag=DKM08_01080 NZ_QFYX01000001.1 Protein Homology CDS 238628 239983 . + 0 ID=cds-WP_003402357.1;Parent=gene-DKM08_RS01085;Dbxref=GenBank:WP_003402357.1;Name=WP_003402357.1;gbkey=CDS;gene=ldtMt5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214997.1;locus_tag=DKM08_RS01085;product=L%2CD-transpeptidase LdtMt5;protein_id=WP_003402357.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 239964 240719 . - . ID=gene-DKM08_RS01090;Name=DKM08_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01090;old_locus_tag=DKM08_01085 NZ_QFYX01000001.1 Protein Homology CDS 239964 240719 . - 0 ID=cds-WP_003402359.1;Parent=gene-DKM08_RS01090;Dbxref=GenBank:WP_003402359.1;Name=WP_003402359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214998.1;locus_tag=DKM08_RS01090;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003402359.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 240902 242218 . + . ID=gene-DKM08_RS01095;Name=DKM08_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01095;old_locus_tag=DKM08_01090 NZ_QFYX01000001.1 Protein Homology CDS 240902 242218 . + 0 ID=cds-WP_003402361.1;Parent=gene-DKM08_RS01095;Dbxref=GenBank:WP_003402361.1;Name=WP_003402361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214999.1;locus_tag=DKM08_RS01095;product=transcriptional regulator;protein_id=WP_003402361.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 242266 243708 . + . ID=gene-DKM08_RS01100;Name=mshA;gbkey=Gene;gene=mshA;gene_biotype=protein_coding;locus_tag=DKM08_RS01100;old_locus_tag=DKM08_01095 NZ_QFYX01000001.1 Protein Homology CDS 242266 243708 . + 0 ID=cds-WP_003402367.1;Parent=gene-DKM08_RS01100;Dbxref=GenBank:WP_003402367.1;Name=WP_003402367.1;Ontology_term=GO:0010125,GO:0008375;gbkey=CDS;gene=mshA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215000.1;locus_tag=DKM08_RS01100;product=D-inositol-3-phosphate glycosyltransferase;protein_id=WP_003402367.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 243705 244256 . + . ID=gene-DKM08_RS01105;Name=DKM08_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01105;old_locus_tag=DKM08_01100 NZ_QFYX01000001.1 Protein Homology CDS 243705 244256 . + 0 ID=cds-WP_003402370.1;Parent=gene-DKM08_RS01105;Dbxref=GenBank:WP_003402370.1;Name=WP_003402370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215001.1;locus_tag=DKM08_RS01105;product=YbjN domain-containing protein;protein_id=WP_003402370.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 244640 245245 . + . ID=gene-DKM08_RS01110;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=DKM08_RS01110;old_locus_tag=DKM08_01105 NZ_QFYX01000001.1 Protein Homology CDS 244640 245245 . + 0 ID=cds-WP_003402377.1;Parent=gene-DKM08_RS01110;Dbxref=GenBank:WP_003402377.1;Name=WP_003402377.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898479.1;locus_tag=DKM08_RS01110;product=L-lysine exporter;protein_id=WP_003402377.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 245402 246151 . + . ID=gene-DKM08_RS01115;Name=DKM08_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01115;old_locus_tag=DKM08_01110 NZ_QFYX01000001.1 Protein Homology CDS 245402 246151 . + 0 ID=cds-WP_003402379.1;Parent=gene-DKM08_RS01115;Dbxref=GenBank:WP_003402379.1;Name=WP_003402379.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177731.1;locus_tag=DKM08_RS01115;product=phosphoglyceromutase;protein_id=WP_003402379.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 246325 247557 . + . ID=gene-DKM08_RS01120;Name=senX3;gbkey=Gene;gene=senX3;gene_biotype=protein_coding;locus_tag=DKM08_RS01120;old_locus_tag=DKM08_01115 NZ_QFYX01000001.1 Protein Homology CDS 246325 247557 . + 0 ID=cds-WP_003402390.1;Parent=gene-DKM08_RS01120;Dbxref=GenBank:WP_003402390.1;Name=WP_003402390.1;gbkey=CDS;gene=senX3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215004.1;locus_tag=DKM08_RS01120;product=two-component system sensor histidine kinase SenX3;protein_id=WP_003402390.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 247915 248598 . + . ID=gene-DKM08_RS01130;Name=regX;gbkey=Gene;gene=regX;gene_biotype=protein_coding;locus_tag=DKM08_RS01130;old_locus_tag=DKM08_01120 NZ_QFYX01000001.1 Protein Homology CDS 247915 248598 . + 0 ID=cds-WP_003402393.1;Parent=gene-DKM08_RS01130;Dbxref=GenBank:WP_003402393.1;Name=WP_003402393.1;gbkey=CDS;gene=regX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402393.1;locus_tag=DKM08_RS01130;product=two-component sensory transduction protein RegX;protein_id=WP_003402393.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 248595 250484 . - . ID=gene-DKM08_RS01135;Name=DKM08_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01135;old_locus_tag=DKM08_01125 NZ_QFYX01000001.1 Protein Homology CDS 248595 250484 . - 0 ID=cds-WP_010950408.1;Parent=gene-DKM08_RS01135;Dbxref=GenBank:WP_010950408.1;Name=WP_010950408.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215006.2;locus_tag=DKM08_RS01135;product=GMC family oxidoreductase;protein_id=WP_010950408.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 250481 250810 . - . ID=gene-DKM08_RS01140;Name=DKM08_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01140;old_locus_tag=DKM08_01130 NZ_QFYX01000001.1 Protein Homology CDS 250481 250810 . - 0 ID=cds-WP_003402400.1;Parent=gene-DKM08_RS01140;Dbxref=GenBank:WP_003402400.1;Name=WP_003402400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177623.1;locus_tag=DKM08_RS01140;product=hypothetical protein;protein_id=WP_003402400.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 250807 251757 . - . ID=gene-DKM08_RS01145;Name=DKM08_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01145;old_locus_tag=DKM08_01135 NZ_QFYX01000001.1 Protein Homology CDS 250807 251757 . - 0 ID=cds-WP_003918084.1;Parent=gene-DKM08_RS01145;Dbxref=GenBank:WP_003918084.1;Name=WP_003918084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911182.1;locus_tag=DKM08_RS01145;product=hypothetical protein;protein_id=WP_003918084.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 251813 252529 . + . ID=gene-DKM08_RS01150;Name=DKM08_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01150;old_locus_tag=DKM08_01140 NZ_QFYX01000001.1 Protein Homology CDS 251813 252529 . + 0 ID=cds-WP_003898483.1;Parent=gene-DKM08_RS01150;Dbxref=GenBank:WP_003898483.1;Name=WP_003898483.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898483.1;locus_tag=DKM08_RS01150;product=FadR/GntR family transcriptional regulator;protein_id=WP_003898483.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 252530 253324 . - . ID=gene-DKM08_RS01155;Name=DKM08_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01155;old_locus_tag=DKM08_01145 NZ_QFYX01000001.1 Protein Homology CDS 252530 253324 . - 0 ID=cds-WP_023637344.1;Parent=gene-DKM08_RS01155;Dbxref=GenBank:WP_023637344.1;Name=WP_023637344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879313.1;locus_tag=DKM08_RS01155;product=hypothetical protein;protein_id=WP_023637344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 253452 254486 . + . ID=gene-DKM08_RS01160;Name=ppx1;gbkey=Gene;gene=ppx1;gene_biotype=protein_coding;locus_tag=DKM08_RS01160;old_locus_tag=DKM08_01150 NZ_QFYX01000001.1 Protein Homology CDS 253452 254486 . + 0 ID=cds-WP_003402419.1;Parent=gene-DKM08_RS01160;Dbxref=GenBank:WP_003402419.1;Name=WP_003402419.1;gbkey=CDS;gene=ppx1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402419.1;locus_tag=DKM08_RS01160;product=exopolyphosphatase Ppx1;protein_id=WP_003402419.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 254483 255415 . + . ID=gene-DKM08_RS01165;Name=DKM08_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01165;old_locus_tag=DKM08_01155 NZ_QFYX01000001.1 Protein Homology CDS 254483 255415 . + 0 ID=cds-WP_003402426.1;Parent=gene-DKM08_RS01165;Dbxref=GenBank:WP_003402426.1;Name=WP_003402426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215011.1;locus_tag=DKM08_RS01165;product=hypothetical protein;protein_id=WP_003402426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 255431 256273 . + . ID=gene-DKM08_RS01170;Name=DKM08_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01170;old_locus_tag=DKM08_01160 NZ_QFYX01000001.1 Protein Homology CDS 255431 256273 . + 0 ID=cds-WP_003402432.1;Parent=gene-DKM08_RS01170;Dbxref=GenBank:WP_003402432.1;Name=WP_003402432.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215012.1;locus_tag=DKM08_RS01170;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_003402432.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 256289 257164 . + . ID=gene-DKM08_RS01175;Name=DKM08_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01175;old_locus_tag=DKM08_01165 NZ_QFYX01000001.1 Protein Homology CDS 256289 257164 . + 0 ID=cds-WP_003402433.1;Parent=gene-DKM08_RS01175;Dbxref=GenBank:WP_003402433.1;Name=WP_003402433.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215013.1;locus_tag=DKM08_RS01175;product=thioesterase family protein;protein_id=WP_003402433.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 257201 258076 . + . ID=gene-DKM08_RS01180;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=DKM08_RS01180;old_locus_tag=DKM08_01170 NZ_QFYX01000001.1 Protein Homology CDS 257201 258076 . + 0 ID=cds-WP_171355219.1;Parent=gene-DKM08_RS01180;Dbxref=GenBank:WP_171355219.1;Name=WP_171355219.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892370.1;locus_tag=DKM08_RS01180;product=pyrroline-5-carboxylate reductase;protein_id=WP_171355219.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 258217 258453 . + . ID=gene-DKM08_RS01185;Name=DKM08_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01185;old_locus_tag=DKM08_01175 NZ_QFYX01000001.1 Protein Homology CDS 258217 258453 . + 0 ID=cds-WP_003402437.1;Parent=gene-DKM08_RS01185;Dbxref=GenBank:WP_003402437.1;Name=WP_003402437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177624.1;locus_tag=DKM08_RS01185;product=cell division/environmental response transcriptional regulator;protein_id=WP_003402437.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 258581 258682 . + . ID=gene-DKM08_RS01190;Name=DKM08_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01190;old_locus_tag=DKM08_01180 NZ_QFYX01000001.1 Protein Homology CDS 258581 258682 . + 0 ID=cds-WP_003402602.1;Parent=gene-DKM08_RS01190;Dbxref=GenBank:WP_003402602.1;Name=WP_003402602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=DKM08_RS01190;product=30S ribosomal protein bS22;protein_id=WP_003402602.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 258760 259890 . + . ID=gene-DKM08_RS01195;Name=DKM08_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01195;old_locus_tag=DKM08_01185 NZ_QFYX01000001.1 Protein Homology CDS 258760 259890 . + 0 ID=cds-WP_003402607.1;Parent=gene-DKM08_RS01195;Dbxref=GenBank:WP_003402607.1;Name=WP_003402607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215050.2;locus_tag=DKM08_RS01195;product=SDR family oxidoreductase;protein_id=WP_003402607.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 259897 260973 . + . ID=gene-DKM08_RS01200;Name=DKM08_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01200;old_locus_tag=DKM08_01190 NZ_QFYX01000001.1 Protein Homology CDS 259897 260973 . + 0 ID=cds-WP_003898486.1;Parent=gene-DKM08_RS01200;Dbxref=GenBank:WP_003898486.1;Name=WP_003898486.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215016.1;locus_tag=DKM08_RS01200;product=lysophospholipid acyltransferase family protein;protein_id=WP_003898486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 260977 261885 . - . ID=gene-DKM08_RS01205;Name=cmaA2;gbkey=Gene;gene=cmaA2;gene_biotype=protein_coding;locus_tag=DKM08_RS01205;old_locus_tag=DKM08_01195 NZ_QFYX01000001.1 Protein Homology CDS 260977 261885 . - 0 ID=cds-WP_003402621.1;Parent=gene-DKM08_RS01205;Dbxref=GenBank:WP_003402621.1;Name=WP_003402621.1;gbkey=CDS;gene=cmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215017.1;locus_tag=DKM08_RS01205;product=cyclopropane mycolic acid synthase CmaA2;protein_id=WP_003402621.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 261908 262408 . - . ID=gene-DKM08_RS01210;Name=DKM08_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01210;old_locus_tag=DKM08_01200 NZ_QFYX01000001.1 Protein Homology CDS 261908 262408 . - 0 ID=cds-WP_003402626.1;Parent=gene-DKM08_RS01210;Dbxref=GenBank:WP_003402626.1;Name=WP_003402626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215018.1;locus_tag=DKM08_RS01210;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_003402626.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 262570 263478 . - . ID=gene-DKM08_RS01215;Name=DKM08_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01215;old_locus_tag=DKM08_01205 NZ_QFYX01000001.1 Protein Homology CDS 262570 263478 . - 0 ID=cds-WP_369810419.1;Parent=gene-DKM08_RS01215;Dbxref=GenBank:WP_369810419.1;Name=WP_369810419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908888.1;locus_tag=DKM08_RS01215;product=HAD family hydrolase;protein_id=WP_369810419.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 263865 264308 . + . ID=gene-DKM08_RS01220;Name=DKM08_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01220;old_locus_tag=DKM08_01210 NZ_QFYX01000001.1 Protein Homology CDS 263865 264308 . + 0 ID=cds-WP_003402688.1;Parent=gene-DKM08_RS01220;Dbxref=GenBank:WP_003402688.1;Name=WP_003402688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215020.1;locus_tag=DKM08_RS01220;product=MmpS family protein;protein_id=WP_003402688.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 264305 267211 . + . ID=gene-DKM08_RS01225;Name=mmpL2;gbkey=Gene;gene=mmpL2;gene_biotype=protein_coding;locus_tag=DKM08_RS01225;old_locus_tag=DKM08_01215 NZ_QFYX01000001.1 Protein Homology CDS 264305 267211 . + 0 ID=cds-WP_147020866.1;Parent=gene-DKM08_RS01225;Dbxref=GenBank:WP_147020866.1;Name=WP_147020866.1;gbkey=CDS;gene=mmpL2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215021.1;locus_tag=DKM08_RS01225;product=RND transporter MmpL2;protein_id=WP_147020866.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 267204 267497 . + . ID=gene-DKM08_RS01230;Name=DKM08_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01230;old_locus_tag=DKM08_01220 NZ_QFYX01000001.1 Protein Homology CDS 267204 267497 . + 0 ID=cds-WP_003402695.1;Parent=gene-DKM08_RS01230;Dbxref=GenBank:WP_003402695.1;Name=WP_003402695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215022.1;locus_tag=DKM08_RS01230;product=glutaredoxin family protein;protein_id=WP_003402695.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 267547 268953 . + . ID=gene-DKM08_RS01235;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=DKM08_RS01235;old_locus_tag=DKM08_01225 NZ_QFYX01000001.1 Protein Homology CDS 267547 268953 . + 0 ID=cds-WP_003402699.1;Parent=gene-DKM08_RS01235;Dbxref=GenBank:WP_003402699.1;Name=WP_003402699.1;Ontology_term=GO:0008883;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215023.1;locus_tag=DKM08_RS01235;product=glutamyl-tRNA reductase;protein_id=WP_003402699.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 268963 269892 . + . ID=gene-DKM08_RS01240;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=DKM08_RS01240;old_locus_tag=DKM08_01230 NZ_QFYX01000001.1 Protein Homology CDS 268963 269892 . + 0 ID=cds-WP_003402702.1;Parent=gene-DKM08_RS01240;Dbxref=GenBank:WP_003402702.1;Name=WP_003402702.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215024.1;locus_tag=DKM08_RS01240;product=hydroxymethylbilane synthase;protein_id=WP_003402702.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 269925 271622 . + . ID=gene-DKM08_RS01245;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=DKM08_RS01245;old_locus_tag=DKM08_01235 NZ_QFYX01000001.1 Protein Homology CDS 269925 271622 . + 0 ID=cds-WP_003900163.1;Parent=gene-DKM08_RS01245;Dbxref=GenBank:WP_003900163.1;Name=WP_003900163.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177733.1;locus_tag=DKM08_RS01245;product=uroporphyrinogen-III synthase;protein_id=WP_003900163.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 271708 272697 . + . ID=gene-DKM08_RS01250;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=DKM08_RS01250;old_locus_tag=DKM08_01240 NZ_QFYX01000001.1 Protein Homology CDS 271708 272697 . + 0 ID=cds-WP_010950410.1;Parent=gene-DKM08_RS01250;Dbxref=GenBank:WP_010950410.1;Name=WP_010950410.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215026.1;locus_tag=DKM08_RS01250;product=porphobilinogen synthase;protein_id=WP_010950410.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 272710 273258 . + . ID=gene-DKM08_RS01255;Name=DKM08_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01255;old_locus_tag=DKM08_01245 NZ_QFYX01000001.1 Protein Homology CDS 272710 273258 . + 0 ID=cds-WP_003402713.1;Parent=gene-DKM08_RS01255;Dbxref=GenBank:WP_003402713.1;Name=WP_003402713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215027.1;locus_tag=DKM08_RS01255;product=hypothetical protein;protein_id=WP_003402713.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 273255 273554 . + . ID=gene-DKM08_RS01260;Name=DKM08_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01260;old_locus_tag=DKM08_01250 NZ_QFYX01000001.1 Protein Homology CDS 273255 273554 . + 0 ID=cds-WP_003402715.1;Parent=gene-DKM08_RS01260;Dbxref=GenBank:WP_003402715.1;Name=WP_003402715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215028.1;locus_tag=DKM08_RS01260;product=hypothetical protein;protein_id=WP_003402715.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 273633 275168 . + . ID=gene-DKM08_RS01265;Name=DKM08_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01265;old_locus_tag=DKM08_01255 NZ_QFYX01000001.1 Protein Homology CDS 273633 275168 . + 0 ID=cds-WP_003900164.1-2;Parent=gene-DKM08_RS01265;Dbxref=GenBank:WP_003900164.1;Name=WP_003900164.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=DKM08_RS01265;product=HNH endonuclease signature motif containing protein;protein_id=WP_003900164.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 275165 275641 . - . ID=gene-DKM08_RS01270;Name=oprA;gbkey=Gene;gene=oprA;gene_biotype=protein_coding;locus_tag=DKM08_RS01270;old_locus_tag=DKM08_01260 NZ_QFYX01000001.1 Protein Homology CDS 275165 275641 . - 0 ID=cds-WP_003402807.1;Parent=gene-DKM08_RS01270;Dbxref=GenBank:WP_003402807.1;Name=WP_003402807.1;gbkey=CDS;gene=oprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215030.1;locus_tag=DKM08_RS01270;product=osmosensory protein OprA;protein_id=WP_003402807.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 275930 277162 . + . ID=gene-DKM08_RS01275;Name=DKM08_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01275;old_locus_tag=DKM08_01265 NZ_QFYX01000001.1 Protein Homology CDS 275930 277162 . + 0 ID=cds-WP_003916685.1;Parent=gene-DKM08_RS01275;Dbxref=GenBank:WP_003916685.1;Name=WP_003916685.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873687.1;locus_tag=DKM08_RS01275;product=acyltransferase family protein;protein_id=WP_003916685.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 277294 277989 . + . ID=gene-DKM08_RS01280;Name=DKM08_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01280;old_locus_tag=DKM08_01270 NZ_QFYX01000001.1 Protein Homology CDS 277294 277989 . + 0 ID=cds-WP_003402818.1;Parent=gene-DKM08_RS01280;Dbxref=GenBank:WP_003402818.1;Name=WP_003402818.1;Ontology_term=GO:0016042,GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215032.1;locus_tag=DKM08_RS01280;product=Rv0518 family GDSL lipase;protein_id=WP_003402818.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 278277 279134 . - . ID=gene-DKM08_RS01285;Name=DKM08_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01285;old_locus_tag=DKM08_01275 NZ_QFYX01000001.1 Protein Homology CDS 278277 279134 . - 0 ID=cds-WP_003912593.1;Parent=gene-DKM08_RS01285;Dbxref=GenBank:WP_003912593.1;Name=WP_003912593.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912593.1;locus_tag=DKM08_RS01285;product=alpha/beta hydrolase;protein_id=WP_003912593.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 279360 279710 . + . ID=gene-DKM08_RS01295;Name=DKM08_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01295;old_locus_tag=DKM08_01285 NZ_QFYX01000001.1 Protein Homology CDS 279360 279710 . + 0 ID=cds-WP_003402827.1;Parent=gene-DKM08_RS01295;Dbxref=GenBank:WP_003402827.1;Name=WP_003402827.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584652.1;locus_tag=DKM08_RS01295;product=class I SAM-dependent methyltransferase;protein_id=WP_003402827.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 279703 280008 . + . ID=gene-DKM08_RS01300;Name=DKM08_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01300;old_locus_tag=DKM08_01290 NZ_QFYX01000001.1 Protein Homology CDS 279703 280008 . + 0 ID=cds-WP_003898493.1;Parent=gene-DKM08_RS01300;Dbxref=GenBank:WP_003898493.1;Name=WP_003898493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402835.1;locus_tag=DKM08_RS01300;product=hypothetical protein;protein_id=WP_003898493.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 280062 281447 . + . ID=gene-DKM08_RS01305;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=DKM08_RS01305;old_locus_tag=DKM08_01295 NZ_QFYX01000001.1 Protein Homology CDS 280062 281447 . + 0 ID=cds-WP_003911231.1;Parent=gene-DKM08_RS01305;Dbxref=GenBank:WP_003911231.1;Name=WP_003911231.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911231.1;locus_tag=DKM08_RS01305;product=amino acid permease;protein_id=WP_003911231.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 281431 281826 . - . ID=gene-DKM08_RS01310;Name=DKM08_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01310;old_locus_tag=DKM08_01300 NZ_QFYX01000001.1 Protein Homology CDS 281431 281826 . - 0 ID=cds-WP_003402842.1;Parent=gene-DKM08_RS01310;Dbxref=GenBank:WP_003402842.1;Name=WP_003402842.1;Ontology_term=GO:0003824,GO:0070967;gbkey=CDS;go_function=catalytic activity|0003824||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215037.1;locus_tag=DKM08_RS01310;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003402842.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 281940 283328 . + . ID=gene-DKM08_RS01315;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=DKM08_RS01315;old_locus_tag=DKM08_01305 NZ_QFYX01000001.1 Protein Homology CDS 281940 283328 . + 0 ID=cds-WP_003402844.1;Parent=gene-DKM08_RS01315;Dbxref=GenBank:WP_003402844.1;Name=WP_003402844.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215038.1;locus_tag=DKM08_RS01315;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_003402844.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 283328 283936 . + . ID=gene-DKM08_RS01320;Name=DKM08_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01320;old_locus_tag=DKM08_01310 NZ_QFYX01000001.1 Protein Homology CDS 283328 283936 . + 0 ID=cds-WP_003402845.1;Parent=gene-DKM08_RS01320;Dbxref=GenBank:WP_003402845.1;Name=WP_003402845.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215039.1;locus_tag=DKM08_RS01320;product=histidine phosphatase family protein;protein_id=WP_003402845.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 283990 284601 . + . ID=gene-DKM08_RS01325;Name=DKM08_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01325;old_locus_tag=DKM08_01315 NZ_QFYX01000001.1 Protein Homology CDS 283990 284601 . + 0 ID=cds-WP_003911234.1;Parent=gene-DKM08_RS01325;Dbxref=GenBank:WP_003911234.1;Name=WP_003911234.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911234.1;locus_tag=DKM08_RS01325;product=TlpA disulfide reductase family protein;protein_id=WP_003911234.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 284598 285377 . + . ID=gene-DKM08_RS01330;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=DKM08_RS01330;old_locus_tag=DKM08_01320 NZ_QFYX01000001.1 Protein Homology CDS 284598 285377 . + 0 ID=cds-WP_003402847.1;Parent=gene-DKM08_RS01330;Dbxref=GenBank:WP_003402847.1;Name=WP_003402847.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=ccdA;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177735.1;locus_tag=DKM08_RS01330;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003402847.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 285410 286999 . + . ID=gene-DKM08_RS01335;Name=resB;gbkey=Gene;gene=resB;gene_biotype=protein_coding;locus_tag=DKM08_RS01335;old_locus_tag=DKM08_01325 NZ_QFYX01000001.1 Protein Homology CDS 285410 286999 . + 0 ID=cds-WP_003402848.1;Parent=gene-DKM08_RS01335;Dbxref=GenBank:WP_003402848.1;Name=WP_003402848.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=resB;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215042.1;locus_tag=DKM08_RS01335;product=cytochrome c biogenesis protein ResB;protein_id=WP_003402848.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 286996 287970 . + . ID=gene-DKM08_RS01340;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=DKM08_RS01340;old_locus_tag=DKM08_01330 NZ_QFYX01000001.1 Protein Homology CDS 286996 287970 . + 0 ID=cds-WP_003402849.1;Parent=gene-DKM08_RS01340;Dbxref=GenBank:WP_003402849.1;Name=WP_003402849.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215041.2;locus_tag=DKM08_RS01340;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_003402849.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 288012 289229 . + . ID=gene-DKM08_RS01345;Name=DKM08_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01345;old_locus_tag=DKM08_01335 NZ_QFYX01000001.1 Protein Homology CDS 288012 289229 . + 0 ID=cds-WP_003898495.1;Parent=gene-DKM08_RS01345;Dbxref=GenBank:WP_003898495.1;Name=WP_003898495.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215044.1;locus_tag=DKM08_RS01345;product=MinD/ParA family ATP-binding protein;protein_id=WP_003898495.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 289226 289387 . - . ID=gene-DKM08_RS01350;Name=DKM08_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01350;old_locus_tag=DKM08_01340 NZ_QFYX01000001.1 Protein Homology CDS 289226 289387 . - 0 ID=cds-WP_003402851.1;Parent=gene-DKM08_RS01350;Dbxref=GenBank:WP_003402851.1;Name=WP_003402851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409181.1;locus_tag=DKM08_RS01350;product=hypothetical protein;protein_id=WP_003402851.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 289434 289751 . + . ID=gene-DKM08_RS01355;Name=DKM08_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01355;old_locus_tag=DKM08_01345 NZ_QFYX01000001.1 Protein Homology CDS 289434 289751 . + 0 ID=cds-WP_003402853.1;Parent=gene-DKM08_RS01355;Dbxref=GenBank:WP_003402853.1;Name=WP_003402853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215045.1;locus_tag=DKM08_RS01355;product=DUF4229 domain-containing protein;protein_id=WP_003402853.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 289898 291776 . + . ID=gene-DKM08_RS01365;Name=DKM08_RS01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS01365;old_locus_tag=DKM08_01355;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 289898 291776 . + 0 ID=cds-DKM08_RS01365;Parent=gene-DKM08_RS01365;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177736.1;locus_tag=DKM08_RS01365;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 291672 292679 . - . ID=gene-DKM08_RS01375;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=DKM08_RS01375;old_locus_tag=DKM08_01365 NZ_QFYX01000001.1 Protein Homology CDS 291672 292679 . - 0 ID=cds-WP_003402861.1;Parent=gene-DKM08_RS01375;Dbxref=GenBank:WP_003402861.1;Name=WP_003402861.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabH;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215047.1;locus_tag=DKM08_RS01375;product=beta-ketoacyl-ACP synthase III;protein_id=WP_003402861.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 292761 293639 . - . ID=gene-DKM08_RS01380;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=DKM08_RS01380;old_locus_tag=DKM08_01370 NZ_QFYX01000001.1 Protein Homology CDS 292761 293639 . - 0 ID=cds-WP_003402865.1;Parent=gene-DKM08_RS01380;Dbxref=GenBank:WP_003402865.1;Name=WP_003402865.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;gene=menA;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215048.1;locus_tag=DKM08_RS01380;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_003402865.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 293674 294450 . + . ID=gene-DKM08_RS01385;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=DKM08_RS01385;old_locus_tag=DKM08_01375 NZ_QFYX01000001.1 Protein Homology CDS 293674 294450 . + 0 ID=cds-WP_003911222.1;Parent=gene-DKM08_RS01385;Dbxref=GenBank:WP_003911222.1;Name=WP_003911222.1;Ontology_term=GO:0009116,GO:0017061;gbkey=CDS;gene=pnp;go_function=S-methyl-5-thioadenosine phosphorylase activity|0017061||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934924.1;locus_tag=DKM08_RS01385;product=S-methyl-5'-thioadenosine phosphorylase;protein_id=WP_003911222.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 294447 295487 . + . ID=gene-DKM08_RS01390;Name=DKM08_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01390;old_locus_tag=DKM08_01380 NZ_QFYX01000001.1 Protein Homology CDS 294447 295487 . + 0 ID=cds-WP_003402868.1;Parent=gene-DKM08_RS01390;Dbxref=GenBank:WP_003402868.1;Name=WP_003402868.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177737.1;locus_tag=DKM08_RS01390;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003402868.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 295497 296930 . - . ID=gene-DKM08_RS01395;Name=DKM08_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01395;old_locus_tag=DKM08_01385 NZ_QFYX01000001.1 Protein Homology CDS 295497 296930 . - 0 ID=cds-WP_003402870.1;Parent=gene-DKM08_RS01395;Dbxref=GenBank:WP_003402870.1;Name=WP_003402870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215051.1;locus_tag=DKM08_RS01395;product=hypothetical protein;protein_id=WP_003402870.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 297239 298885 . + . ID=gene-DKM08_RS01400;Name=DKM08_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01400;old_locus_tag=DKM08_01390 NZ_QFYX01000001.1 Protein Homology CDS 297239 298885 . + 0 ID=cds-WP_003900169.1;Parent=gene-DKM08_RS01400;Dbxref=GenBank:WP_003900169.1;Name=WP_003900169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215052.1;locus_tag=DKM08_RS01400;product=hypothetical protein;protein_id=WP_003900169.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 298918 299574 . + . ID=gene-DKM08_RS01405;Name=DKM08_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01405;old_locus_tag=DKM08_01395 NZ_QFYX01000001.1 Protein Homology CDS 298918 299574 . + 0 ID=cds-WP_003898499.1;Parent=gene-DKM08_RS01405;Dbxref=GenBank:WP_003898499.1;Name=WP_003898499.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898499.1;locus_tag=DKM08_RS01405;product=glycosyltransferase family 2 protein;protein_id=WP_003898499.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 299571 300233 . + . ID=gene-DKM08_RS01410;Name=DKM08_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01410;old_locus_tag=DKM08_01400 NZ_QFYX01000001.1 Protein Homology CDS 299571 300233 . + 0 ID=cds-WP_003402886.1;Parent=gene-DKM08_RS01410;Dbxref=GenBank:WP_003402886.1;Name=WP_003402886.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215054.1;locus_tag=DKM08_RS01410;product=TIGR04282 family arsenosugar biosynthesis glycosyltransferase;protein_id=WP_003402886.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 300254 301603 . - . ID=gene-DKM08_RS01415;Name=DKM08_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01415;old_locus_tag=DKM08_01405 NZ_QFYX01000001.1 Protein Homology CDS 300254 301603 . - 0 ID=cds-WP_010950412.1;Parent=gene-DKM08_RS01415;Dbxref=GenBank:WP_010950412.1;Name=WP_010950412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215055.1;locus_tag=DKM08_RS01415;product=hypothetical protein;protein_id=WP_010950412.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 301615 302703 . - . ID=gene-DKM08_RS01420;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=DKM08_RS01420;old_locus_tag=DKM08_01410 NZ_QFYX01000001.1 Protein Homology CDS 301615 302703 . - 0 ID=cds-WP_003402892.1;Parent=gene-DKM08_RS01420;Dbxref=GenBank:WP_003402892.1;Name=WP_003402892.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215056.1;locus_tag=DKM08_RS01420;product=o-succinylbenzoate--CoA ligase;protein_id=WP_003402892.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 302772 303074 . - . ID=gene-DKM08_RS01425;Name=DKM08_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01425;old_locus_tag=DKM08_01415 NZ_QFYX01000001.1 Protein Homology CDS 302772 303074 . - 0 ID=cds-WP_003402896.1;Parent=gene-DKM08_RS01425;Dbxref=GenBank:WP_003402896.1;Name=WP_003402896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215057.1;locus_tag=DKM08_RS01425;product=DUF3349 domain-containing protein;protein_id=WP_003402896.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 303134 303412 . - . ID=gene-DKM08_RS01430;Name=DKM08_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01430;old_locus_tag=DKM08_01420 NZ_QFYX01000001.1 Protein Homology CDS 303134 303412 . - 0 ID=cds-WP_003402901.1;Parent=gene-DKM08_RS01430;Dbxref=GenBank:WP_003402901.1;Name=WP_003402901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215058.1;locus_tag=DKM08_RS01430;product=hypothetical protein;protein_id=WP_003402901.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 303409 304662 . - . ID=gene-DKM08_RS01435;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=DKM08_RS01435;old_locus_tag=DKM08_01425 NZ_QFYX01000001.1 Protein Homology CDS 303409 304662 . - 0 ID=cds-WP_003402904.1;Parent=gene-DKM08_RS01435;Dbxref=GenBank:WP_003402904.1;Name=WP_003402904.1;gbkey=CDS;gene=pitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215059.1;locus_tag=DKM08_RS01435;product=inorganic phosphate transporter;protein_id=WP_003402904.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 304782 305168 . - . ID=gene-DKM08_RS01440;Name=DKM08_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01440;old_locus_tag=DKM08_01430 NZ_QFYX01000001.1 Protein Homology CDS 304782 305168 . - 0 ID=cds-WP_003402907.1;Parent=gene-DKM08_RS01440;Dbxref=GenBank:WP_003402907.1;Name=WP_003402907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215060.1;locus_tag=DKM08_RS01440;product=VOC family protein;protein_id=WP_003402907.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 305231 306115 . - . ID=gene-DKM08_RS01445;Name=DKM08_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01445;old_locus_tag=DKM08_01435 NZ_QFYX01000001.1 Protein Homology CDS 305231 306115 . - 0 ID=cds-WP_003402909.1;Parent=gene-DKM08_RS01445;Dbxref=GenBank:WP_003402909.1;Name=WP_003402909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215061.1;locus_tag=DKM08_RS01445;product=SDR family oxidoreductase;protein_id=WP_003402909.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 306211 307113 . - . ID=gene-DKM08_RS01450;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=DKM08_RS01450;old_locus_tag=DKM08_01440 NZ_QFYX01000001.1 Protein Homology CDS 306211 307113 . - 0 ID=cds-WP_003915439.1;Parent=gene-DKM08_RS01450;Dbxref=GenBank:WP_003915439.1;Name=WP_003915439.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727493.1;locus_tag=DKM08_RS01450;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_003915439.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 307427 307839 . - . ID=gene-DKM08_RS01460;Name=DKM08_RS01460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS01460;old_locus_tag=DKM08_01450;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 307427 307839 . - 0 ID=cds-DKM08_RS01460;Parent=gene-DKM08_RS01460;Note=frameshifted;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215063.1;locus_tag=DKM08_RS01460;product=type II toxin-antitoxin system VapC family toxin;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 307836 308102 . - . ID=gene-DKM08_RS01465;Name=DKM08_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01465;old_locus_tag=DKM08_01455 NZ_QFYX01000001.1 Protein Homology CDS 307836 308102 . - 0 ID=cds-WP_003402915.1;Parent=gene-DKM08_RS01465;Dbxref=GenBank:WP_003402915.1;Name=WP_003402915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215064.1;locus_tag=DKM08_RS01465;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_003402915.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 308294 310009 . - . ID=gene-DKM08_RS01470;Name=fadD8;gbkey=Gene;gene=fadD8;gene_biotype=protein_coding;locus_tag=DKM08_RS01470;old_locus_tag=DKM08_01460 NZ_QFYX01000001.1 Protein Homology CDS 308294 310009 . - 0 ID=cds-WP_147020868.1;Parent=gene-DKM08_RS01470;Dbxref=GenBank:WP_147020868.1;Name=WP_147020868.1;gbkey=CDS;gene=fadD8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=DKM08_RS01470;product=fatty-acid--CoA ligase FadD8;protein_id=WP_147020868.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 310087 311691 . + . ID=gene-DKM08_RS01475;Name=DKM08_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01475;old_locus_tag=DKM08_01465 NZ_QFYX01000001.1 Protein Homology CDS 310087 311691 . + 0 ID=cds-WP_003402920.1;Parent=gene-DKM08_RS01475;Dbxref=GenBank:WP_003402920.1;Name=WP_003402920.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215066.1;locus_tag=DKM08_RS01475;product=amidohydrolase;protein_id=WP_003402920.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 311688 312668 . + . ID=gene-DKM08_RS01480;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=DKM08_RS01480;old_locus_tag=DKM08_01470 NZ_QFYX01000001.1 Protein Homology CDS 311688 312668 . + 0 ID=cds-WP_003402923.1;Parent=gene-DKM08_RS01480;Dbxref=GenBank:WP_003402923.1;Name=WP_003402923.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215067.1;locus_tag=DKM08_RS01480;product=o-succinylbenzoate synthase;protein_id=WP_003402923.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 312665 313453 . + . ID=gene-DKM08_RS01485;Name=bpoC;gbkey=Gene;gene=bpoC;gene_biotype=protein_coding;locus_tag=DKM08_RS01485;old_locus_tag=DKM08_01475 NZ_QFYX01000001.1 Protein Homology CDS 312665 313453 . + 0 ID=cds-WP_003402925.1;Parent=gene-DKM08_RS01485;Dbxref=GenBank:WP_003402925.1;Name=WP_003402925.1;gbkey=CDS;gene=bpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215068.1;locus_tag=DKM08_RS01485;product=alpha/beta fold hydrolase;protein_id=WP_003402925.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 313496 315160 . + . ID=gene-DKM08_RS01490;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=DKM08_RS01490;old_locus_tag=DKM08_01480 NZ_QFYX01000001.1 Protein Homology CDS 313496 315160 . + 0 ID=cds-WP_003402927.1;Parent=gene-DKM08_RS01490;Dbxref=GenBank:WP_003402927.1;Name=WP_003402927.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215069.1;locus_tag=DKM08_RS01490;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_003402927.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 315157 315672 . + . ID=gene-DKM08_RS01495;Name=DKM08_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01495;old_locus_tag=DKM08_01485 NZ_QFYX01000001.1 Protein Homology CDS 315157 315672 . + 0 ID=cds-WP_003402929.1;Parent=gene-DKM08_RS01495;Dbxref=GenBank:WP_003402929.1;Name=WP_003402929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215070.1;locus_tag=DKM08_RS01495;product=DUF3592 domain-containing protein;protein_id=WP_003402929.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 315743 316870 . + . ID=gene-DKM08_RS01500;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=DKM08_RS01500;old_locus_tag=DKM08_01490 NZ_QFYX01000001.1 Protein Homology CDS 315743 316870 . + 0 ID=cds-WP_003898502.1;Parent=gene-DKM08_RS01500;Dbxref=GenBank:WP_003898502.1;Name=WP_003898502.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912598.1;locus_tag=DKM08_RS01500;product=GDP-mannose-dependent alpha-mannosyltransferase;protein_id=WP_003898502.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 316887 317591 . + . ID=gene-DKM08_RS01505;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=DKM08_RS01505;old_locus_tag=DKM08_01495 NZ_QFYX01000001.1 Protein Homology CDS 316887 317591 . + 0 ID=cds-WP_003402936.1;Parent=gene-DKM08_RS01505;Dbxref=GenBank:WP_003402936.1;Name=WP_003402936.1;Ontology_term=GO:0008168;gbkey=CDS;gene=menH;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177738.1;locus_tag=DKM08_RS01505;product=demethylmenaquinone methyltransferase;protein_id=WP_003402936.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 317605 317943 . - . ID=gene-DKM08_RS01510;Name=DKM08_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01510;old_locus_tag=DKM08_01500 NZ_QFYX01000001.1 Protein Homology CDS 317605 317943 . - 0 ID=cds-WP_003402937.1;Parent=gene-DKM08_RS01510;Dbxref=GenBank:WP_003402937.1;Name=WP_003402937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215073.1;locus_tag=DKM08_RS01510;product=DUF732 domain-containing protein;protein_id=WP_003402937.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 317977 318654 . - . ID=gene-DKM08_RS01515;Name=DKM08_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01515;old_locus_tag=DKM08_01505 NZ_QFYX01000001.1 Protein Homology CDS 317977 318654 . - 0 ID=cds-WP_003911240.1;Parent=gene-DKM08_RS01515;Dbxref=GenBank:WP_003911240.1;Name=WP_003911240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911240.1;locus_tag=DKM08_RS01515;product=benzoquinone methyltransferase;protein_id=WP_003911240.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 318727 319953 . - . ID=gene-DKM08_RS01520;Name=menJ;gbkey=Gene;gene=menJ;gene_biotype=protein_coding;locus_tag=DKM08_RS01520;old_locus_tag=DKM08_01510 NZ_QFYX01000001.1 Protein Homology CDS 318727 319953 . - 0 ID=cds-WP_003402939.1;Parent=gene-DKM08_RS01520;Dbxref=GenBank:WP_003402939.1;Name=WP_003402939.1;Ontology_term=GO:0009234,GO:0016627,GO:0016628;gbkey=CDS;gene=menJ;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215075.1;locus_tag=DKM08_RS01520;product=menaquinone reductase;protein_id=WP_003402939.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 319969 320976 . + . ID=gene-DKM08_RS01525;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=DKM08_RS01525;old_locus_tag=DKM08_01515 NZ_QFYX01000001.1 Protein Homology CDS 319969 320976 . + 0 ID=cds-WP_003402957.1;Parent=gene-DKM08_RS01525;Dbxref=GenBank:WP_003402957.1;Name=WP_003402957.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215076.1;locus_tag=DKM08_RS01525;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003402957.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 321077 321937 . + . ID=gene-DKM08_RS01530;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=DKM08_RS01530;old_locus_tag=DKM08_01520 NZ_QFYX01000001.1 Protein Homology CDS 321077 321937 . + 0 ID=cds-WP_003402959.1;Parent=gene-DKM08_RS01530;Dbxref=GenBank:WP_003402959.1;Name=WP_003402959.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215077.1;locus_tag=DKM08_RS01530;product=zinc metalloprotease HtpX;protein_id=WP_003402959.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 322122 323147 . - . ID=gene-DKM08_RS01535;Name=DKM08_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01535;old_locus_tag=DKM08_01525 NZ_QFYX01000001.1 Protein Homology CDS 322122 323147 . - 0 ID=cds-WP_003900965.1;Parent=gene-DKM08_RS01535;Dbxref=GenBank:WP_003900965.1;Name=WP_003900965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215078.1;locus_tag=DKM08_RS01535;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003900965.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 323208 324668 . - . ID=gene-DKM08_RS01540;Name=DKM08_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01540;old_locus_tag=DKM08_01530 NZ_QFYX01000001.1 Protein Homology CDS 323208 324668 . - 0 ID=cds-WP_003402981.1;Parent=gene-DKM08_RS01540;Dbxref=GenBank:WP_003402981.1;Name=WP_003402981.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215079.1;locus_tag=DKM08_RS01540;product=flavin-containing monooxygenase;protein_id=WP_003402981.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 324746 325237 . - . ID=gene-DKM08_RS01545;Name=DKM08_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01545;old_locus_tag=DKM08_01535 NZ_QFYX01000001.1 Protein Homology CDS 324746 325237 . - 0 ID=cds-WP_003402987.1;Parent=gene-DKM08_RS01545;Dbxref=GenBank:WP_003402987.1;Name=WP_003402987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215080.1;locus_tag=DKM08_RS01545;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_003402987.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 325307 325390 . + . ID=gene-DKM08_RS01550;Name=DKM08_RS01550;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS01550;old_locus_tag=DKM08_01540 NZ_QFYX01000001.1 tRNAscan-SE tRNA 325307 325390 . + . ID=rna-DKM08_RS01550;Parent=gene-DKM08_RS01550;anticodon=(pos:325341..325343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01550;product=tRNA-Tyr NZ_QFYX01000001.1 tRNAscan-SE exon 325307 325390 . + . ID=exon-DKM08_RS01550-1;Parent=rna-DKM08_RS01550;anticodon=(pos:325341..325343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01550;product=tRNA-Tyr NZ_QFYX01000001.1 RefSeq gene 325519 326538 . + . ID=gene-DKM08_RS01555;Name=DKM08_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01555;old_locus_tag=DKM08_01545 NZ_QFYX01000001.1 Protein Homology CDS 325519 326538 . + 0 ID=cds-WP_003402990.1;Parent=gene-DKM08_RS01555;Dbxref=GenBank:WP_003402990.1;Name=WP_003402990.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215081.1;locus_tag=DKM08_RS01555;product=methyltransferase;protein_id=WP_003402990.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 326648 328066 . + . ID=gene-DKM08_RS01560;Name=DKM08_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01560;old_locus_tag=DKM08_01550 NZ_QFYX01000001.1 Protein Homology CDS 326648 328066 . + 0 ID=cds-WP_003402992.1;Parent=gene-DKM08_RS01560;Dbxref=GenBank:WP_003402992.1;Name=WP_003402992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215082.1;locus_tag=DKM08_RS01560;product=cytochrome P450;protein_id=WP_003402992.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 328201 328467 . + . ID=gene-DKM08_RS01565;Name=DKM08_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01565;old_locus_tag=DKM08_01555 NZ_QFYX01000001.1 Protein Homology CDS 328201 328467 . + 0 ID=cds-WP_003402995.1;Parent=gene-DKM08_RS01565;Dbxref=GenBank:WP_003402995.1;Name=WP_003402995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215083.1;locus_tag=DKM08_RS01565;product=DUF1918 domain-containing protein;protein_id=WP_003402995.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 328493 330570 . + . ID=gene-DKM08_RS01570;Name=nrdZ;gbkey=Gene;gene=nrdZ;gene_biotype=pseudogene;locus_tag=DKM08_RS01570;old_locus_tag=DKM08_01560;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 328493 330570 . + 0 ID=cds-DKM08_RS01570;Parent=gene-DKM08_RS01570;Note=frameshifted;Ontology_term=GO:0000166,GO:0004748,GO:0031419;gbkey=CDS;gene=nrdZ;go_function=nucleotide binding|0000166||IEA,ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215084.1;locus_tag=DKM08_RS01570;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 330684 332015 . - . ID=gene-DKM08_RS01580;Name=DKM08_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01580;old_locus_tag=DKM08_01570 NZ_QFYX01000001.1 Protein Homology CDS 330684 332015 . - 0 ID=cds-WP_023349446.1;Parent=gene-DKM08_RS01580;Dbxref=GenBank:WP_023349446.1;Name=WP_023349446.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215085.1;locus_tag=DKM08_RS01580;product=phosphoribosyltransferase family protein;protein_id=WP_023349446.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 332239 332580 . - . ID=gene-DKM08_RS01585;Name=DKM08_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01585;old_locus_tag=DKM08_01575 NZ_QFYX01000001.1 Protein Homology CDS 332239 332580 . - 0 ID=cds-WP_003898507.1;Parent=gene-DKM08_RS01585;Dbxref=GenBank:WP_003898507.1;Name=WP_003898507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215086.1;locus_tag=DKM08_RS01585;product=hypothetical protein;protein_id=WP_003898507.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 333048 334439 . - . ID=gene-DKM08_RS01595;Name=DKM08_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01595;old_locus_tag=DKM08_01585 NZ_QFYX01000001.1 Protein Homology CDS 333048 334439 . - 0 ID=cds-WP_003403007.1;Parent=gene-DKM08_RS01595;Dbxref=GenBank:WP_003403007.1;Name=WP_003403007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215087.1;locus_tag=DKM08_RS01595;product=nicotinate phosphoribosyltransferase;protein_id=WP_003403007.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 334449 335591 . - . ID=gene-DKM08_RS01600;Name=DKM08_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01600;old_locus_tag=DKM08_01590 NZ_QFYX01000001.1 Protein Homology CDS 334449 335591 . - 0 ID=cds-WP_010950414.1;Parent=gene-DKM08_RS01600;Dbxref=GenBank:WP_010950414.1;Name=WP_010950414.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215088.1;locus_tag=DKM08_RS01600;product=CapA family protein;protein_id=WP_010950414.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 335807 336943 . - . ID=gene-DKM08_RS01605;Name=DKM08_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01605;old_locus_tag=DKM08_01595 NZ_QFYX01000001.1 Protein Homology CDS 335807 336943 . - 0 ID=cds-WP_003403010.1;Parent=gene-DKM08_RS01605;Dbxref=GenBank:WP_003403010.1;Name=WP_003403010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005761.0;locus_tag=DKM08_RS01605;product=FAD-binding domain;protein_id=WP_003403010.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 337046 338350 . + . ID=gene-DKM08_RS01610;Name=DKM08_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01610;old_locus_tag=DKM08_01600 NZ_QFYX01000001.1 Protein Homology CDS 337046 338350 . + 0 ID=cds-WP_147020918.1;Parent=gene-DKM08_RS01610;Dbxref=GenBank:WP_147020918.1;Name=WP_147020918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215090.1;locus_tag=DKM08_RS01610;product=TIGR03086 family metal-binding protein;protein_id=WP_147020918.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 338364 339149 . + . ID=gene-DKM08_RS01615;Name=DKM08_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01615;old_locus_tag=DKM08_01605 NZ_QFYX01000001.1 Protein Homology CDS 338364 339149 . + 0 ID=cds-WP_003403012.1;Parent=gene-DKM08_RS01615;Dbxref=GenBank:WP_003403012.1;Name=WP_003403012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215091.1;locus_tag=DKM08_RS01615;product=VOC family protein;protein_id=WP_003403012.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 339194 343114 . - . ID=gene-DKM08_RS01620;Name=DKM08_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01620;old_locus_tag=DKM08_01610 NZ_QFYX01000001.1 Protein Homology CDS 339194 343114 . - 0 ID=cds-WP_147020869.1;Parent=gene-DKM08_RS01620;Dbxref=GenBank:WP_147020869.1;Name=WP_147020869.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177739.1;locus_tag=DKM08_RS01620;product=PE family protein;protein_id=WP_147020869.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 343436 344194 . + . ID=gene-DKM08_RS01630;Name=DKM08_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01630;old_locus_tag=DKM08_01620 NZ_QFYX01000001.1 Protein Homology CDS 343436 344194 . + 0 ID=cds-WP_003898511.1;Parent=gene-DKM08_RS01630;Dbxref=GenBank:WP_003898511.1;Name=WP_003898511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215093.1;locus_tag=DKM08_RS01630;product=Mut7-C RNAse domain-containing protein;protein_id=WP_003898511.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 344323 344814 . - . ID=gene-DKM08_RS01635;Name=DKM08_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01635;old_locus_tag=DKM08_01625 NZ_QFYX01000001.1 Protein Homology CDS 344323 344814 . - 0 ID=cds-WP_003403017.1;Parent=gene-DKM08_RS01635;Dbxref=GenBank:WP_003403017.1;Name=WP_003403017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215094.1;locus_tag=DKM08_RS01635;product=mycobacterial cell wall protein Rv0580c;protein_id=WP_003403017.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 344908 345123 . + . ID=gene-DKM08_RS01640;Name=vapB26;gbkey=Gene;gene=vapB26;gene_biotype=protein_coding;locus_tag=DKM08_RS01640;old_locus_tag=DKM08_01630 NZ_QFYX01000001.1 Protein Homology CDS 344908 345123 . + 0 ID=cds-WP_003403039.1;Parent=gene-DKM08_RS01640;Dbxref=GenBank:WP_003403039.1;Name=WP_003403039.1;gbkey=CDS;gene=vapB26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215095.1;locus_tag=DKM08_RS01640;product=type II toxin-antitoxin system antitoxin VapB26;protein_id=WP_003403039.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 345120 345527 . + . ID=gene-DKM08_RS01645;Name=vapC26;gbkey=Gene;gene=vapC26;gene_biotype=protein_coding;locus_tag=DKM08_RS01645;old_locus_tag=DKM08_01635 NZ_QFYX01000001.1 Protein Homology CDS 345120 345527 . + 0 ID=cds-WP_003403047.1;Parent=gene-DKM08_RS01645;Dbxref=GenBank:WP_003403047.1;Name=WP_003403047.1;gbkey=CDS;gene=vapC26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215096.1;locus_tag=DKM08_RS01645;product=type II toxin-antitoxin system toxin ribonuclease C26;protein_id=WP_003403047.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 345587 346273 . - . ID=gene-DKM08_RS01650;Name=lpqN;gbkey=Gene;gene=lpqN;gene_biotype=protein_coding;locus_tag=DKM08_RS01650;old_locus_tag=DKM08_01640 NZ_QFYX01000001.1 Protein Homology CDS 345587 346273 . - 0 ID=cds-WP_003403052.1;Parent=gene-DKM08_RS01650;Dbxref=GenBank:WP_003403052.1;Name=WP_003403052.1;gbkey=CDS;gene=lpqN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215097.1;locus_tag=DKM08_RS01650;product=LpqN/LpqT family lipoprotein;protein_id=WP_003403052.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 346427 349060 . + . ID=gene-DKM08_RS01655;Name=DKM08_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01655;old_locus_tag=DKM08_01645 NZ_QFYX01000001.1 Protein Homology CDS 346427 349060 . + 0 ID=cds-WP_010950416.1;Parent=gene-DKM08_RS01655;Dbxref=GenBank:WP_010950416.1;Name=WP_010950416.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215098.1;locus_tag=DKM08_RS01655;product=GH92 family glycosyl hydrolase;protein_id=WP_010950416.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 349083 351470 . - . ID=gene-DKM08_RS01660;Name=DKM08_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01660;old_locus_tag=DKM08_01650 NZ_QFYX01000001.1 Protein Homology CDS 349083 351470 . - 0 ID=cds-WP_003900178.1;Parent=gene-DKM08_RS01660;Dbxref=GenBank:WP_003900178.1;Name=WP_003900178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215099.1;locus_tag=DKM08_RS01660;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_003900178.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 351608 352330 . + . ID=gene-DKM08_RS01665;Name=mce2R;gbkey=Gene;gene=mce2R;gene_biotype=protein_coding;locus_tag=DKM08_RS01665;old_locus_tag=DKM08_01655 NZ_QFYX01000001.1 Protein Homology CDS 351608 352330 . + 0 ID=cds-WP_003403065.1;Parent=gene-DKM08_RS01665;Dbxref=GenBank:WP_003403065.1;Name=WP_003403065.1;gbkey=CDS;gene=mce2R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215100.1;locus_tag=DKM08_RS01665;product=FadR family transcriptional regulator Mce2R;protein_id=WP_003403065.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 352327 353124 . + . ID=gene-DKM08_RS01670;Name=DKM08_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01670;old_locus_tag=DKM08_01660 NZ_QFYX01000001.1 Protein Homology CDS 352327 353124 . + 0 ID=cds-WP_003403095.1;Parent=gene-DKM08_RS01670;Dbxref=GenBank:WP_003403095.1;Name=WP_003403095.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215101.1;locus_tag=DKM08_RS01670;product=MlaE family ABC transporter permease;protein_id=WP_003403095.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 353126 354013 . + . ID=gene-DKM08_RS01675;Name=DKM08_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01675;old_locus_tag=DKM08_01665 NZ_QFYX01000001.1 Protein Homology CDS 353126 354013 . + 0 ID=cds-WP_003403101.1;Parent=gene-DKM08_RS01675;Dbxref=GenBank:WP_003403101.1;Name=WP_003403101.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215102.1;locus_tag=DKM08_RS01675;product=ABC transporter permease;protein_id=WP_003403101.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 354019 355233 . + . ID=gene-DKM08_RS01680;Name=DKM08_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01680;old_locus_tag=DKM08_01670 NZ_QFYX01000001.1 Protein Homology CDS 354019 355233 . + 0 ID=cds-WP_010950418.1;Parent=gene-DKM08_RS01680;Dbxref=GenBank:WP_010950418.1;Name=WP_010950418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177740.1;locus_tag=DKM08_RS01680;product=MCE family protein;protein_id=WP_010950418.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 355230 356261 . + . ID=gene-DKM08_RS01685;Name=DKM08_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01685;old_locus_tag=DKM08_01675 NZ_QFYX01000001.1 Protein Homology CDS 355230 356261 . + 0 ID=cds-WP_003403107.1;Parent=gene-DKM08_RS01685;Dbxref=GenBank:WP_003403107.1;Name=WP_003403107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873596.1;locus_tag=DKM08_RS01685;product=MCE family protein;protein_id=WP_003403107.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 356258 357703 . + . ID=gene-DKM08_RS01690;Name=DKM08_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01690;old_locus_tag=DKM08_01680 NZ_QFYX01000001.1 Protein Homology CDS 356258 357703 . + 0 ID=cds-WP_003403109.1;Parent=gene-DKM08_RS01690;Dbxref=GenBank:WP_003403109.1;Name=WP_003403109.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215105.1;locus_tag=DKM08_RS01690;product=virulence factor Mce family protein;protein_id=WP_003403109.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 357700 359228 . + . ID=gene-DKM08_RS01695;Name=DKM08_RS01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS01695;old_locus_tag=DKM08_01685;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 357700 359228 . + 0 ID=cds-DKM08_RS01695;Parent=gene-DKM08_RS01695;Note=frameshifted;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215106.1;locus_tag=DKM08_RS01695;product=virulence factor Mce family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 359291 360433 . + . ID=gene-DKM08_RS21460;Name=lprL;gbkey=Gene;gene=lprL;gene_biotype=pseudogene;locus_tag=DKM08_RS21460;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 359291 360433 . + 0 ID=cds-DKM08_RS21460;Parent=gene-DKM08_RS21460;Note=internal stop;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprL;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911253.1;locus_tag=DKM08_RS21460;product=virulence factor Mce family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 360438 361988 . + . ID=gene-DKM08_RS01710;Name=DKM08_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01710;old_locus_tag=DKM08_01700 NZ_QFYX01000001.1 Protein Homology CDS 360438 361988 . + 0 ID=cds-WP_003403119.1;Parent=gene-DKM08_RS01710;Dbxref=GenBank:WP_003403119.1;Name=WP_003403119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215108.1;locus_tag=DKM08_RS01710;product=MCE family protein;protein_id=WP_003403119.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 362040 362432 . - . ID=gene-DKM08_RS01715;Name=vapC4;gbkey=Gene;gene=vapC4;gene_biotype=protein_coding;locus_tag=DKM08_RS01715;old_locus_tag=DKM08_01705 NZ_QFYX01000001.1 Protein Homology CDS 362040 362432 . - 0 ID=cds-WP_003403122.1;Parent=gene-DKM08_RS01715;Dbxref=GenBank:WP_003403122.1;Name=WP_003403122.1;gbkey=CDS;gene=vapC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215109.1;locus_tag=DKM08_RS01715;product=type II toxin-antitoxin system toxin ribonuclease C4;protein_id=WP_003403122.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 362429 362686 . - . ID=gene-DKM08_RS01720;Name=vapB4;gbkey=Gene;gene=vapB4;gene_biotype=protein_coding;locus_tag=DKM08_RS01720;old_locus_tag=DKM08_01710 NZ_QFYX01000001.1 Protein Homology CDS 362429 362686 . - 0 ID=cds-WP_003403125.1;Parent=gene-DKM08_RS01720;Dbxref=GenBank:WP_003403125.1;Name=WP_003403125.1;gbkey=CDS;gene=vapB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215110.1;locus_tag=DKM08_RS01720;product=type II toxin-antitoxin system antitoxin VapB4;protein_id=WP_003403125.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 362869 364104 . - . ID=gene-DKM08_RS01725;Name=DKM08_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01725;old_locus_tag=DKM08_01715 NZ_QFYX01000001.1 Protein Homology CDS 362869 364104 . - 0 ID=cds-WP_003403128.1;Parent=gene-DKM08_RS01725;Dbxref=GenBank:WP_003403128.1;Name=WP_003403128.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215111.1;locus_tag=DKM08_RS01725;product=ATP-binding protein;protein_id=WP_003403128.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 364206 364394 . + . ID=gene-DKM08_RS22600;Name=DKM08_RS22600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22600;partial=true;pseudo=true;start_range=.,364206 NZ_QFYX01000001.1 Protein Homology CDS 364206 364394 . + 0 ID=cds-DKM08_RS22600;Parent=gene-DKM08_RS22600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013827543.1;locus_tag=DKM08_RS22600;partial=true;product=hypothetical protein;pseudo=true;start_range=.,364206;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 364355 364768 . - . ID=gene-DKM08_RS01730;Name=DKM08_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01730;old_locus_tag=DKM08_01720 NZ_QFYX01000001.1 Protein Homology CDS 364355 364768 . - 0 ID=cds-WP_003403137.1;Parent=gene-DKM08_RS01730;Dbxref=GenBank:WP_003403137.1;Name=WP_003403137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215112.1;locus_tag=DKM08_RS01730;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403137.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 364765 365001 . - . ID=gene-DKM08_RS01735;Name=vapB27;gbkey=Gene;gene=vapB27;gene_biotype=protein_coding;locus_tag=DKM08_RS01735;old_locus_tag=DKM08_01725 NZ_QFYX01000001.1 Protein Homology CDS 364765 365001 . - 0 ID=cds-WP_003403139.1;Parent=gene-DKM08_RS01735;Dbxref=GenBank:WP_003403139.1;Name=WP_003403139.1;gbkey=CDS;gene=vapB27;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215113.1;locus_tag=DKM08_RS01735;product=type II toxin-antitoxin system antitoxin VapB27;protein_id=WP_003403139.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 365105 365611 . - . ID=gene-DKM08_RS01740;Name=DKM08_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01740;old_locus_tag=DKM08_01730 NZ_QFYX01000001.1 Protein Homology CDS 365105 365611 . - 0 ID=cds-WP_003900973.1;Parent=gene-DKM08_RS01740;Dbxref=GenBank:WP_003900973.1;Name=WP_003900973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900973.1;locus_tag=DKM08_RS01740;product=two component system sensor kinase HK1;protein_id=WP_003900973.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 365725 366255 . - . ID=gene-DKM08_RS01745;Name=DKM08_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01745;old_locus_tag=DKM08_01735 NZ_QFYX01000001.1 Protein Homology CDS 365725 366255 . - 0 ID=cds-WP_003917320.1;Parent=gene-DKM08_RS01745;Dbxref=GenBank:WP_003917320.1;Name=WP_003917320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917320.1;locus_tag=DKM08_RS01745;product=two component system sensor kinase HK2;protein_id=WP_003917320.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 366239 366934 . - . ID=gene-DKM08_RS01750;Name=tcrA;gbkey=Gene;gene=tcrA;gene_biotype=protein_coding;locus_tag=DKM08_RS01750;old_locus_tag=DKM08_01740 NZ_QFYX01000001.1 Protein Homology CDS 366239 366934 . - 0 ID=cds-WP_197044064.1;Parent=gene-DKM08_RS01750;Dbxref=GenBank:WP_197044064.1;Name=WP_197044064.1;gbkey=CDS;gene=tcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585072.1;locus_tag=DKM08_RS01750;product=two-component system response regulator TcrA;protein_id=WP_197044064.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 367057 367368 . + . ID=gene-DKM08_RS01755;Name=DKM08_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01755;old_locus_tag=DKM08_01745 NZ_QFYX01000001.1 Protein Homology CDS 367057 367368 . + 0 ID=cds-WP_003403164.1;Parent=gene-DKM08_RS01755;Dbxref=GenBank:WP_003403164.1;Name=WP_003403164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215117.1;locus_tag=DKM08_RS01755;product=hypothetical protein;protein_id=WP_003403164.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 367440 368390 . + . ID=gene-DKM08_RS01760;Name=lpqO;gbkey=Gene;gene=lpqO;gene_biotype=protein_coding;locus_tag=DKM08_RS01760;old_locus_tag=DKM08_01750 NZ_QFYX01000001.1 Protein Homology CDS 367440 368390 . + 0 ID=cds-WP_003907436.1;Parent=gene-DKM08_RS01760;Dbxref=GenBank:WP_003907436.1;Name=WP_003907436.1;gbkey=CDS;gene=lpqO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215118.1;locus_tag=DKM08_RS01760;product=DUF1259 domain-containing protein;protein_id=WP_003907436.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 368443 368537 . - . ID=gene-DKM08_RS22605;Name=DKM08_RS22605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22605;partial=true;pseudo=true;start_range=.,368443 NZ_QFYX01000001.1 Protein Homology CDS 368443 368537 . - 0 ID=cds-DKM08_RS22605;Parent=gene-DKM08_RS22605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=DKM08_RS22605;partial=true;product=hypothetical protein;pseudo=true;start_range=.,368443;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 368631 369215 . + . ID=gene-DKM08_RS01765;Name=DKM08_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01765;old_locus_tag=DKM08_01755 NZ_QFYX01000001.1 Protein Homology CDS 368631 369215 . + 0 ID=cds-WP_003403171.1;Parent=gene-DKM08_RS01765;Dbxref=GenBank:WP_003403171.1;Name=WP_003403171.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215119.2;locus_tag=DKM08_RS01765;product=IS607-like element IS1536 family transposase;protein_id=WP_003403171.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 369217 369927 . + . ID=gene-DKM08_RS01770;Name=tnpB;end_range=369927,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=DKM08_RS01770;old_locus_tag=DKM08_01760;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 369217 369927 . + 0 ID=cds-DKM08_RS01770;Parent=gene-DKM08_RS01770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=369927,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=DKM08_RS01770;partial=true;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 369930 370400 . + . ID=gene-DKM08_RS01775;Name=DKM08_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01775;old_locus_tag=DKM08_01765 NZ_QFYX01000001.1 Protein Homology CDS 369930 370400 . + 0 ID=cds-WP_003898523.1;Parent=gene-DKM08_RS01775;Dbxref=GenBank:WP_003898523.1;Name=WP_003898523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898523.1;locus_tag=DKM08_RS01775;product=hypothetical protein;protein_id=WP_003898523.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 370445 370690 . + . ID=gene-DKM08_RS01780;Name=DKM08_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01780;old_locus_tag=DKM08_01770 NZ_QFYX01000001.1 Protein Homology CDS 370445 370690 . + 0 ID=cds-WP_003403184.1;Parent=gene-DKM08_RS01780;Dbxref=GenBank:WP_003403184.1;Name=WP_003403184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215122.1;locus_tag=DKM08_RS01780;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403184.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 370687 371088 . + . ID=gene-DKM08_RS01785;Name=DKM08_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01785;old_locus_tag=DKM08_01775 NZ_QFYX01000001.1 Protein Homology CDS 370687 371088 . + 0 ID=cds-WP_003403187.1;Parent=gene-DKM08_RS01785;Dbxref=GenBank:WP_003403187.1;Name=WP_003403187.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215123.1;locus_tag=DKM08_RS01785;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403187.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 371094 371258 . + . ID=gene-DKM08_RS21910;Name=DKM08_RS21910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21910;old_locus_tag=DKM08_01780;partial=true;pseudo=true;start_range=.,371094 NZ_QFYX01000001.1 Protein Homology CDS 371094 371258 . + 0 ID=cds-DKM08_RS21910;Parent=gene-DKM08_RS21910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292309.1;locus_tag=DKM08_RS21910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,371094;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 371476 371643 . - . ID=gene-DKM08_RS22610;Name=DKM08_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22610;old_locus_tag=DKM08_01790 NZ_QFYX01000001.1 Protein Homology CDS 371476 371643 . - 0 ID=cds-WP_077385191.1;Parent=gene-DKM08_RS22610;Dbxref=GenBank:WP_077385191.1;Name=WP_077385191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=DKM08_RS22610;product=DUF3800 domain-containing protein;protein_id=WP_077385191.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 371667 371960 . + . ID=gene-DKM08_RS22470;Name=DKM08_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22470 NZ_QFYX01000001.1 Protein Homology CDS 371667 371960 . + 0 ID=cds-WP_016719609.1;Parent=gene-DKM08_RS22470;Dbxref=GenBank:WP_016719609.1;Name=WP_016719609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719609.1;locus_tag=DKM08_RS22470;product=hypothetical protein;protein_id=WP_016719609.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 371953 373110 . - . ID=gene-DKM08_RS01810;Name=DKM08_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01810;old_locus_tag=DKM08_01800 NZ_QFYX01000001.1 Protein Homology CDS 371953 373110 . - 0 ID=cds-WP_003403193.1;Parent=gene-DKM08_RS01810;Dbxref=GenBank:WP_003403193.1;Name=WP_003403193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215124.1;locus_tag=DKM08_RS01810;product=hypothetical protein;protein_id=WP_003403193.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 373162 373383 . - . ID=gene-DKM08_RS01815;Name=DKM08_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01815;old_locus_tag=DKM08_01805 NZ_QFYX01000001.1 Protein Homology CDS 373162 373383 . - 0 ID=cds-WP_003898525.1;Parent=gene-DKM08_RS01815;Dbxref=GenBank:WP_003898525.1;Name=WP_003898525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215125.2;locus_tag=DKM08_RS01815;product=DUF4926 domain-containing protein;protein_id=WP_003898525.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 373525 374130 . + . ID=gene-DKM08_RS01820;Name=DKM08_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01820;old_locus_tag=DKM08_01810 NZ_QFYX01000001.1 Protein Homology CDS 373525 374130 . + 0 ID=cds-WP_003898526.1;Parent=gene-DKM08_RS01820;Dbxref=GenBank:WP_003898526.1;Name=WP_003898526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215126.1;locus_tag=DKM08_RS01820;product=hypothetical protein;protein_id=WP_003898526.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 374149 376716 . - . ID=gene-DKM08_RS01825;Name=DKM08_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01825;old_locus_tag=DKM08_01815 NZ_QFYX01000001.1 Protein Homology CDS 374149 376716 . - 0 ID=cds-WP_003900188.1;Parent=gene-DKM08_RS01825;Dbxref=GenBank:WP_003900188.1;Name=WP_003900188.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=DKM08_RS01825;product=SEC-C metal-binding domain-containing protein;protein_id=WP_003900188.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 376800 377549 . + . ID=gene-DKM08_RS01830;Name=DKM08_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01830;old_locus_tag=DKM08_01820 NZ_QFYX01000001.1 Protein Homology CDS 376800 377549 . + 0 ID=cds-WP_003898528.1;Parent=gene-DKM08_RS01830;Dbxref=GenBank:WP_003898528.1;Name=WP_003898528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215128.2;locus_tag=DKM08_RS01830;product=hypothetical protein;protein_id=WP_003898528.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 377546 377788 . + . ID=gene-DKM08_RS01835;Name=DKM08_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01835;old_locus_tag=DKM08_01825 NZ_QFYX01000001.1 Protein Homology CDS 377546 377788 . + 0 ID=cds-WP_003403210.1;Parent=gene-DKM08_RS01835;Dbxref=GenBank:WP_003403210.1;Name=WP_003403210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215129.1;locus_tag=DKM08_RS01835;product=hypothetical protein;protein_id=WP_003403210.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 377785 378051 . - . ID=gene-DKM08_RS22475;Name=DKM08_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22475;old_locus_tag=DKM08_01830 NZ_QFYX01000001.1 Protein Homology CDS 377785 378051 . - 0 ID=cds-WP_003898530.1;Parent=gene-DKM08_RS22475;Dbxref=GenBank:WP_003898530.1;Name=WP_003898530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898530.1;locus_tag=DKM08_RS22475;product=hypothetical protein;protein_id=WP_003898530.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 377983 378210 . + . ID=gene-DKM08_RS01845;Name=DKM08_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01845;old_locus_tag=DKM08_01835 NZ_QFYX01000001.1 Protein Homology CDS 377983 378210 . + 0 ID=cds-WP_003403213.1;Parent=gene-DKM08_RS01845;Dbxref=GenBank:WP_003403213.1;Name=WP_003403213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409270.1;locus_tag=DKM08_RS01845;product=antitoxin VapB29;protein_id=WP_003403213.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 378207 378608 . + . ID=gene-DKM08_RS01850;Name=vapC29;gbkey=Gene;gene=vapC29;gene_biotype=protein_coding;locus_tag=DKM08_RS01850;old_locus_tag=DKM08_01840 NZ_QFYX01000001.1 Protein Homology CDS 378207 378608 . + 0 ID=cds-WP_003403218.1;Parent=gene-DKM08_RS01850;Dbxref=GenBank:WP_003403218.1;Name=WP_003403218.1;gbkey=CDS;gene=vapC29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215131.1;locus_tag=DKM08_RS01850;product=type II toxin-antitoxin system ribonuclease VapC29;protein_id=WP_003403218.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 378839 378904 . + . ID=gene-DKM08_RS22615;Name=DKM08_RS22615;end_range=378904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22615;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 378839 378904 . + 0 ID=cds-DKM08_RS22615;Parent=gene-DKM08_RS22615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=378904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215128.2;locus_tag=DKM08_RS22615;partial=true;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 378896 379921 . + . ID=gene-DKM08_RS01855;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=DKM08_RS01855;old_locus_tag=DKM08_01845 NZ_QFYX01000001.1 Protein Homology CDS 378896 379921 . + 0 ID=cds-WP_235732379.1;Parent=gene-DKM08_RS01855;Dbxref=GenBank:WP_235732379.1;Name=WP_235732379.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292318.1;locus_tag=DKM08_RS01855;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_235732379.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 379918 381009 . + . ID=gene-DKM08_RS01860;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=DKM08_RS01860;old_locus_tag=DKM08_01850 NZ_QFYX01000001.1 Protein Homology CDS 379918 381009 . + 0 ID=cds-WP_003403225.1;Parent=gene-DKM08_RS01860;Dbxref=GenBank:WP_003403225.1;Name=WP_003403225.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283607.1;locus_tag=DKM08_RS01860;product=galactokinase;protein_id=WP_003403225.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 381404 382561 . + . ID=gene-DKM08_RS01870;Name=DKM08_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01870;old_locus_tag=DKM08_01860 NZ_QFYX01000001.1 Protein Homology CDS 381404 382561 . + 0 ID=cds-WP_003903091.1;Parent=gene-DKM08_RS01870;Dbxref=GenBank:WP_003903091.1;Name=WP_003903091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403229.1;locus_tag=DKM08_RS01870;product=hypothetical protein;protein_id=WP_003903091.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 382572 383519 . + . ID=gene-DKM08_RS01875;Name=DKM08_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01875;old_locus_tag=DKM08_01865 NZ_QFYX01000001.1 Protein Homology CDS 382572 383519 . + 0 ID=cds-WP_003403232.1;Parent=gene-DKM08_RS01875;Dbxref=GenBank:WP_003403232.1;Name=WP_003403232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215136.2;locus_tag=DKM08_RS01875;product=DUF732 domain-containing protein;protein_id=WP_003403232.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 383612 383866 . + . ID=gene-DKM08_RS01880;Name=vapB30;gbkey=Gene;gene=vapB30;gene_biotype=protein_coding;locus_tag=DKM08_RS01880;old_locus_tag=DKM08_01870 NZ_QFYX01000001.1 Protein Homology CDS 383612 383866 . + 0 ID=cds-WP_003403235.1;Parent=gene-DKM08_RS01880;Dbxref=GenBank:WP_003403235.1;Name=WP_003403235.1;gbkey=CDS;gene=vapB30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215137.1;locus_tag=DKM08_RS01880;product=type II toxin-antitoxin system antitoxin VapB30;protein_id=WP_003403235.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 383866 384261 . + . ID=gene-DKM08_RS01885;Name=vapC30;gbkey=Gene;gene=vapC30;gene_biotype=protein_coding;locus_tag=DKM08_RS01885;old_locus_tag=DKM08_01875 NZ_QFYX01000001.1 Protein Homology CDS 383866 384261 . + 0 ID=cds-WP_003403236.1;Parent=gene-DKM08_RS01885;Dbxref=GenBank:WP_003403236.1;Name=WP_003403236.1;gbkey=CDS;gene=vapC30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215138.1;locus_tag=DKM08_RS01885;product=type II toxin-antitoxin system toxin ribonuclease C30;protein_id=WP_003403236.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 384355 385095 . - . ID=gene-DKM08_RS01890;Name=DKM08_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01890;old_locus_tag=DKM08_01880 NZ_QFYX01000001.1 Protein Homology CDS 384355 385095 . - 0 ID=cds-WP_003403239.1;Parent=gene-DKM08_RS01890;Dbxref=GenBank:WP_003403239.1;Name=WP_003403239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215139.1;locus_tag=DKM08_RS01890;product=TVP38/TMEM64 family protein;protein_id=WP_003403239.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 385227 385487 . + . ID=gene-DKM08_RS01895;Name=DKM08_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01895;old_locus_tag=DKM08_01885 NZ_QFYX01000001.1 Protein Homology CDS 385227 385487 . + 0 ID=cds-WP_003403244.1;Parent=gene-DKM08_RS01895;Dbxref=GenBank:WP_003403244.1;Name=WP_003403244.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215140.1;locus_tag=DKM08_RS01895;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403244.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 385484 385891 . + . ID=gene-DKM08_RS01900;Name=DKM08_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01900;old_locus_tag=DKM08_01890 NZ_QFYX01000001.1 Protein Homology CDS 385484 385891 . + 0 ID=cds-WP_003403246.1;Parent=gene-DKM08_RS01900;Dbxref=GenBank:WP_003403246.1;Name=WP_003403246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215141.1;locus_tag=DKM08_RS01900;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403246.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 385963 387114 . - . ID=gene-DKM08_RS01905;Name=DKM08_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01905;old_locus_tag=DKM08_01895 NZ_QFYX01000001.1 Protein Homology CDS 385963 387114 . - 0 ID=cds-WP_003403248.1;Parent=gene-DKM08_RS01905;Dbxref=GenBank:WP_003403248.1;Name=WP_003403248.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215142.1;locus_tag=DKM08_RS01905;product=FIST signal transduction protein;protein_id=WP_003403248.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 387207 388934 . - . ID=gene-DKM08_RS01910;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=DKM08_RS01910;old_locus_tag=DKM08_01900 NZ_QFYX01000001.1 Protein Homology CDS 387207 388934 . - 0 ID=cds-WP_010950423.1;Parent=gene-DKM08_RS01910;Dbxref=GenBank:WP_010950423.1;Name=WP_010950423.1;Ontology_term=GO:0006281,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215143.1;locus_tag=DKM08_RS01910;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_010950423.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 388931 392214 . - . ID=gene-DKM08_RS01915;Name=recB;gbkey=Gene;gene=recB;gene_biotype=pseudogene;locus_tag=DKM08_RS01915;old_locus_tag=DKM08_01905;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 388931 392214 . - 0 ID=cds-DKM08_RS01915;Parent=gene-DKM08_RS01915;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215144.1;locus_tag=DKM08_RS01915;product=exodeoxyribonuclease V subunit beta;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 392214 395507 . - . ID=gene-DKM08_RS01920;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=DKM08_RS01920;old_locus_tag=DKM08_01910 NZ_QFYX01000001.1 Protein Homology CDS 392214 395507 . - 0 ID=cds-WP_003403253.1;Parent=gene-DKM08_RS01920;Dbxref=GenBank:WP_003403253.1;Name=WP_003403253.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215145.1;locus_tag=DKM08_RS01920;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_003403253.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 395784 396479 . - . ID=gene-DKM08_RS01925;Name=DKM08_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01925;old_locus_tag=DKM08_01915 NZ_QFYX01000001.1 Protein Homology CDS 395784 396479 . - 0 ID=cds-WP_003403259.1;Parent=gene-DKM08_RS01925;Dbxref=GenBank:WP_003403259.1;Name=WP_003403259.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215146.1;locus_tag=DKM08_RS01925;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403259.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 396528 397358 . - . ID=gene-DKM08_RS01930;Name=DKM08_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01930;old_locus_tag=DKM08_01920 NZ_QFYX01000001.1 Protein Homology CDS 396528 397358 . - 0 ID=cds-WP_003918105.1;Parent=gene-DKM08_RS01930;Dbxref=GenBank:WP_003918105.1;Name=WP_003918105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215147.1;locus_tag=DKM08_RS01930;product=hypothetical protein;protein_id=WP_003918105.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 397512 398225 . - . ID=gene-DKM08_RS01935;Name=DKM08_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01935;old_locus_tag=DKM08_01925 NZ_QFYX01000001.1 Protein Homology CDS 397512 398225 . - 0 ID=cds-WP_003403266.1;Parent=gene-DKM08_RS01935;Dbxref=GenBank:WP_003403266.1;Name=WP_003403266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215148.1;locus_tag=DKM08_RS01935;product=MBL fold metallo-hydrolase;protein_id=WP_003403266.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 398344 398556 . + . ID=gene-DKM08_RS01940;Name=DKM08_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS01940;old_locus_tag=DKM08_01930 NZ_QFYX01000001.1 Protein Homology CDS 398344 398556 . + 0 ID=cds-WP_003898537.1;Parent=gene-DKM08_RS01940;Dbxref=GenBank:WP_003898537.1;Name=WP_003898537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287878.1;locus_tag=DKM08_RS01940;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003898537.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 398686 398758 . + . ID=gene-DKM08_RS01945;Name=DKM08_RS01945;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS01945;old_locus_tag=DKM08_01935 NZ_QFYX01000001.1 tRNAscan-SE tRNA 398686 398758 . + . ID=rna-DKM08_RS01945;Parent=gene-DKM08_RS01945;anticodon=(pos:398719..398721);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01945;product=tRNA-Thr NZ_QFYX01000001.1 tRNAscan-SE exon 398686 398758 . + . ID=exon-DKM08_RS01945-1;Parent=rna-DKM08_RS01945;anticodon=(pos:398719..398721);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01945;product=tRNA-Thr NZ_QFYX01000001.1 RefSeq gene 398795 398868 . + . ID=gene-DKM08_RS01950;Name=DKM08_RS01950;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS01950;old_locus_tag=DKM08_01940 NZ_QFYX01000001.1 tRNAscan-SE tRNA 398795 398868 . + . ID=rna-DKM08_RS01950;Parent=gene-DKM08_RS01950;anticodon=(pos:398829..398831);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01950;product=tRNA-Met NZ_QFYX01000001.1 tRNAscan-SE exon 398795 398868 . + . ID=exon-DKM08_RS01950-1;Parent=rna-DKM08_RS01950;anticodon=(pos:398829..398831);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01950;product=tRNA-Met NZ_QFYX01000001.1 RefSeq gene 398904 399071 . + . ID=gene-DKM08_RS01955;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DKM08_RS01955;old_locus_tag=DKM08_01945 NZ_QFYX01000001.1 Protein Homology CDS 398904 399071 . + 0 ID=cds-WP_003898538.1;Parent=gene-DKM08_RS01955;Dbxref=GenBank:WP_003898538.1;Name=WP_003898538.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177630.1;locus_tag=DKM08_RS01955;product=50S ribosomal protein L33;protein_id=WP_003898538.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 399122 399598 . + . ID=gene-DKM08_RS01960;Name=hadA;gbkey=Gene;gene=hadA;gene_biotype=protein_coding;locus_tag=DKM08_RS01960;old_locus_tag=DKM08_01950 NZ_QFYX01000001.1 Protein Homology CDS 399122 399598 . + 0 ID=cds-WP_003403277.1;Parent=gene-DKM08_RS01960;Dbxref=GenBank:WP_003403277.1;Name=WP_003403277.1;gbkey=CDS;gene=hadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215149.1;locus_tag=DKM08_RS01960;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;protein_id=WP_003403277.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 399585 400013 . + . ID=gene-DKM08_RS01965;Name=hadB;gbkey=Gene;gene=hadB;gene_biotype=protein_coding;locus_tag=DKM08_RS01965;old_locus_tag=DKM08_01955 NZ_QFYX01000001.1 Protein Homology CDS 399585 400013 . + 0 ID=cds-WP_010950426.1;Parent=gene-DKM08_RS01965;Dbxref=GenBank:WP_010950426.1;Name=WP_010950426.1;Ontology_term=GO:0071768;gbkey=CDS;gene=hadB;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215150.1;locus_tag=DKM08_RS01965;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;protein_id=WP_010950426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 400017 400517 . + . ID=gene-DKM08_RS01970;Name=hadC;gbkey=Gene;gene=hadC;gene_biotype=protein_coding;locus_tag=DKM08_RS01970;old_locus_tag=DKM08_01960 NZ_QFYX01000001.1 Protein Homology CDS 400017 400517 . + 0 ID=cds-WP_003403282.1;Parent=gene-DKM08_RS01970;Dbxref=GenBank:WP_003403282.1;Name=WP_003403282.1;gbkey=CDS;gene=hadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215151.1;locus_tag=DKM08_RS01970;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;protein_id=WP_003403282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 400716 400788 . + . ID=gene-DKM08_RS01975;Name=DKM08_RS01975;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS01975;old_locus_tag=DKM08_01965 NZ_QFYX01000001.1 tRNAscan-SE tRNA 400716 400788 . + . ID=rna-DKM08_RS01975;Parent=gene-DKM08_RS01975;anticodon=(pos:400749..400751);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01975;product=tRNA-Trp NZ_QFYX01000001.1 tRNAscan-SE exon 400716 400788 . + . ID=exon-DKM08_RS01975-1;Parent=rna-DKM08_RS01975;anticodon=(pos:400749..400751);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS01975;product=tRNA-Trp NZ_QFYX01000001.1 RefSeq gene 400929 401414 . + . ID=gene-DKM08_RS01980;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=DKM08_RS01980;old_locus_tag=DKM08_01970 NZ_QFYX01000001.1 Protein Homology CDS 400929 401414 . + 0 ID=cds-WP_003403284.1;Parent=gene-DKM08_RS01980;Dbxref=GenBank:WP_003403284.1;Name=WP_003403284.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177743.1;locus_tag=DKM08_RS01980;product=preprotein translocase subunit SecE;protein_id=WP_003403284.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 401446 402162 . + . ID=gene-DKM08_RS01985;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=DKM08_RS01985;old_locus_tag=DKM08_01975 NZ_QFYX01000001.1 Protein Homology CDS 401446 402162 . + 0 ID=cds-WP_023349453.1;Parent=gene-DKM08_RS01985;Dbxref=GenBank:WP_023349453.1;Name=WP_023349453.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215153.1;locus_tag=DKM08_RS01985;product=transcription termination/antitermination protein NusG;protein_id=WP_023349453.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 402214 402642 . + . ID=gene-DKM08_RS01990;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=DKM08_RS01990;old_locus_tag=DKM08_01980 NZ_QFYX01000001.1 Protein Homology CDS 402214 402642 . + 0 ID=cds-WP_003403291.1;Parent=gene-DKM08_RS01990;Dbxref=GenBank:WP_003403291.1;Name=WP_003403291.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215154.1;locus_tag=DKM08_RS01990;product=50S ribosomal protein L11;protein_id=WP_003403291.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 402709 403416 . + . ID=gene-DKM08_RS01995;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=DKM08_RS01995;old_locus_tag=DKM08_01985 NZ_QFYX01000001.1 Protein Homology CDS 402709 403416 . + 0 ID=cds-WP_010950427.1;Parent=gene-DKM08_RS01995;Dbxref=GenBank:WP_010950427.1;Name=WP_010950427.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215155.1;locus_tag=DKM08_RS01995;product=50S ribosomal protein L1;protein_id=WP_010950427.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 403490 404395 . - . ID=gene-DKM08_RS02000;Name=mmaA4;gbkey=Gene;gene=mmaA4;gene_biotype=protein_coding;locus_tag=DKM08_RS02000;old_locus_tag=DKM08_01990 NZ_QFYX01000001.1 Protein Homology CDS 403490 404395 . - 0 ID=cds-WP_003910170.1;Parent=gene-DKM08_RS02000;Dbxref=GenBank:WP_003910170.1;Name=WP_003910170.1;gbkey=CDS;gene=mmaA4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215156.1;locus_tag=DKM08_RS02000;product=hydroxymycolate synthase MmaA4;protein_id=WP_003910170.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 404460 405341 . - . ID=gene-DKM08_RS02005;Name=mmaA3;gbkey=Gene;gene=mmaA3;gene_biotype=protein_coding;locus_tag=DKM08_RS02005;old_locus_tag=DKM08_01995 NZ_QFYX01000001.1 Protein Homology CDS 404460 405341 . - 0 ID=cds-WP_003403302.1;Parent=gene-DKM08_RS02005;Dbxref=GenBank:WP_003403302.1;Name=WP_003403302.1;gbkey=CDS;gene=mmaA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215157.1;locus_tag=DKM08_RS02005;product=methoxy mycolic acid synthase MmaA3;protein_id=WP_003403302.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 405489 406352 . - . ID=gene-DKM08_RS02010;Name=mmaA2;gbkey=Gene;gene=mmaA2;gene_biotype=protein_coding;locus_tag=DKM08_RS02010;old_locus_tag=DKM08_02000 NZ_QFYX01000001.1 Protein Homology CDS 405489 406352 . - 0 ID=cds-WP_003403304.1;Parent=gene-DKM08_RS02010;Dbxref=GenBank:WP_003403304.1;Name=WP_003403304.1;gbkey=CDS;gene=mmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215158.1;locus_tag=DKM08_RS02010;product=cyclopropane mycolic acid synthase MmaA2;protein_id=WP_003403304.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 406519 407379 . - . ID=gene-DKM08_RS02015;Name=mmaA1;gbkey=Gene;gene=mmaA1;gene_biotype=protein_coding;locus_tag=DKM08_RS02015;old_locus_tag=DKM08_02005 NZ_QFYX01000001.1 Protein Homology CDS 406519 407379 . - 0 ID=cds-WP_003403310.1;Parent=gene-DKM08_RS02015;Dbxref=GenBank:WP_003403310.1;Name=WP_003403310.1;gbkey=CDS;gene=mmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215159.1;locus_tag=DKM08_RS02015;product=mycolic acid methyltransferase MmaA1;protein_id=WP_003403310.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 407426 408331 . - . ID=gene-DKM08_RS02020;Name=lipG;gbkey=Gene;gene=lipG;gene_biotype=protein_coding;locus_tag=DKM08_RS02020;old_locus_tag=DKM08_02010 NZ_QFYX01000001.1 Protein Homology CDS 407426 408331 . - 0 ID=cds-WP_003403314.1;Parent=gene-DKM08_RS02020;Dbxref=GenBank:WP_003403314.1;Name=WP_003403314.1;gbkey=CDS;gene=lipG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215160.1;locus_tag=DKM08_RS02020;product=lipase/esterase LipG;protein_id=WP_003403314.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 408343 409689 . - . ID=gene-DKM08_RS02025;Name=DKM08_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02025;old_locus_tag=DKM08_02015 NZ_QFYX01000001.1 Protein Homology CDS 408343 409689 . - 0 ID=cds-WP_024456092.1;Parent=gene-DKM08_RS02025;Dbxref=GenBank:WP_024456092.1;Name=WP_024456092.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292344.1;locus_tag=DKM08_RS02025;product=ABC1 kinase family protein;protein_id=WP_024456092.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 409895 414091 . + . ID=gene-DKM08_RS02030;Name=DKM08_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02030;old_locus_tag=DKM08_02020 NZ_QFYX01000001.1 Protein Homology CDS 409895 414091 . + 0 ID=cds-WP_011799121.1;Parent=gene-DKM08_RS02030;Dbxref=GenBank:WP_011799121.1;Name=WP_011799121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988757.1;locus_tag=DKM08_RS02030;product=NEW3 domain-containing protein;protein_id=WP_011799121.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 414088 414762 . + . ID=gene-DKM08_RS02035;Name=DKM08_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02035;old_locus_tag=DKM08_02025 NZ_QFYX01000001.1 Protein Homology CDS 414088 414762 . + 0 ID=cds-WP_003403326.1;Parent=gene-DKM08_RS02035;Dbxref=GenBank:WP_003403326.1;Name=WP_003403326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177744.1;locus_tag=DKM08_RS02035;product=DUF7158 domain-containing protein;protein_id=WP_003403326.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 414762 415670 . + . ID=gene-DKM08_RS02040;Name=DKM08_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02040;old_locus_tag=DKM08_02030 NZ_QFYX01000001.1 Protein Homology CDS 414762 415670 . + 0 ID=cds-WP_003403330.1;Parent=gene-DKM08_RS02040;Dbxref=GenBank:WP_003403330.1;Name=WP_003403330.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215164.1;locus_tag=DKM08_RS02040;product=ROK family protein;protein_id=WP_003403330.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 416001 416537 . + . ID=gene-DKM08_RS02045;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=DKM08_RS02045;old_locus_tag=DKM08_02035 NZ_QFYX01000001.1 Protein Homology CDS 416001 416537 . + 0 ID=cds-WP_003403341.1;Parent=gene-DKM08_RS02045;Dbxref=GenBank:WP_003403341.1;Name=WP_003403341.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215165.1;locus_tag=DKM08_RS02045;product=50S ribosomal protein L10;protein_id=WP_003403341.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 416574 416966 . + . ID=gene-DKM08_RS02050;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=DKM08_RS02050;old_locus_tag=DKM08_02040 NZ_QFYX01000001.1 Protein Homology CDS 416574 416966 . + 0 ID=cds-WP_003403353.1;Parent=gene-DKM08_RS02050;Dbxref=GenBank:WP_003403353.1;Name=WP_003403353.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215166.1;locus_tag=DKM08_RS02050;product=50S ribosomal protein L7/L12;protein_id=WP_003403353.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 416959 417654 . - . ID=gene-DKM08_RS02055;Name=DKM08_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02055;old_locus_tag=DKM08_02045 NZ_QFYX01000001.1 Protein Homology CDS 416959 417654 . - 0 ID=cds-WP_003403355.1;Parent=gene-DKM08_RS02055;Dbxref=GenBank:WP_003403355.1;Name=WP_003403355.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215167.1;locus_tag=DKM08_RS02055;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403355.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 417725 419230 . + . ID=gene-DKM08_RS02060;Name=DKM08_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02060;old_locus_tag=DKM08_02050 NZ_QFYX01000001.1 Protein Homology CDS 417725 419230 . + 0 ID=cds-WP_023349454.1;Parent=gene-DKM08_RS02060;Dbxref=GenBank:WP_023349454.1;Name=WP_023349454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215168.1;locus_tag=DKM08_RS02060;product=carotenoid cleavage oxygenase;protein_id=WP_023349454.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 419311 420321 . + . ID=gene-DKM08_RS02065;Name=mkl;gbkey=Gene;gene=mkl;gene_biotype=protein_coding;locus_tag=DKM08_RS02065;old_locus_tag=DKM08_02055 NZ_QFYX01000001.1 Protein Homology CDS 419311 420321 . + 0 ID=cds-WP_003911248.1;Parent=gene-DKM08_RS02065;Dbxref=GenBank:WP_003911248.1;Name=WP_003911248.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=mkl;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911248.1;locus_tag=DKM08_RS02065;product=ABC transporter ATP-binding protein;protein_id=WP_003911248.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 420709 421092 . - . ID=gene-DKM08_RS02070;Name=DKM08_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02070;old_locus_tag=DKM08_02060 NZ_QFYX01000001.1 Protein Homology CDS 420709 421092 . - 0 ID=cds-WP_003403365.1;Parent=gene-DKM08_RS02070;Dbxref=GenBank:WP_003403365.1;Name=WP_003403365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215170.1;locus_tag=DKM08_RS02070;product=ribonuclease VapC6;protein_id=WP_003403365.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 421187 421342 . - . ID=gene-DKM08_RS02075;Name=DKM08_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02075;old_locus_tag=DKM08_02065 NZ_QFYX01000001.1 Protein Homology CDS 421187 421342 . - 0 ID=cds-WP_003403368.1;Parent=gene-DKM08_RS02075;Dbxref=GenBank:WP_003403368.1;Name=WP_003403368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215171.1;locus_tag=DKM08_RS02075;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403368.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 421418 422134 . - . ID=gene-DKM08_RS02080;Name=DKM08_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02080;old_locus_tag=DKM08_02070 NZ_QFYX01000001.1 Protein Homology CDS 421418 422134 . - 0 ID=cds-WP_023349455.1;Parent=gene-DKM08_RS02080;Dbxref=GenBank:WP_023349455.1;Name=WP_023349455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215172.1;locus_tag=DKM08_RS02080;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_023349455.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 422410 422718 . - . ID=gene-DKM08_RS02085;Name=DKM08_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02085;old_locus_tag=DKM08_02075 NZ_QFYX01000001.1 Protein Homology CDS 422410 422718 . - 0 ID=cds-WP_003403376.1;Parent=gene-DKM08_RS02085;Dbxref=GenBank:WP_003403376.1;Name=WP_003403376.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215173.1;locus_tag=DKM08_RS02085;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003403376.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 422705 422950 . - . ID=gene-DKM08_RS02090;Name=DKM08_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02090;old_locus_tag=DKM08_02080 NZ_QFYX01000001.1 Protein Homology CDS 422705 422950 . - 0 ID=cds-WP_003403381.1;Parent=gene-DKM08_RS02090;Dbxref=GenBank:WP_003403381.1;Name=WP_003403381.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215174.1;locus_tag=DKM08_RS02090;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403381.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 423060 423497 . - . ID=gene-DKM08_RS02095;Name=DKM08_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02095;old_locus_tag=DKM08_02085 NZ_QFYX01000001.1 Protein Homology CDS 423060 423497 . - 0 ID=cds-WP_003403386.1;Parent=gene-DKM08_RS02095;Dbxref=GenBank:WP_003403386.1;Name=WP_003403386.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215175.1;locus_tag=DKM08_RS02095;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403386.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 423494 423748 . - . ID=gene-DKM08_RS02100;Name=DKM08_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02100;old_locus_tag=DKM08_02090 NZ_QFYX01000001.1 Protein Homology CDS 423494 423748 . - 0 ID=cds-WP_003911263.1;Parent=gene-DKM08_RS02100;Dbxref=GenBank:WP_003911263.1;Name=WP_003911263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215176.2;locus_tag=DKM08_RS02100;product=antitoxin VapB7;protein_id=WP_003911263.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 423862 426225 . + . ID=gene-DKM08_RS02105;Name=atsD;gbkey=Gene;gene=atsD;gene_biotype=protein_coding;locus_tag=DKM08_RS02105;old_locus_tag=DKM08_02095 NZ_QFYX01000001.1 Protein Homology CDS 423862 426225 . + 0 ID=cds-WP_003403397.1;Parent=gene-DKM08_RS02105;Dbxref=GenBank:WP_003403397.1;Name=WP_003403397.1;gbkey=CDS;gene=atsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215177.1;locus_tag=DKM08_RS02105;product=arylsulfatase AtsD;protein_id=WP_003403397.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 426288 426614 . + . ID=gene-DKM08_RS02110;Name=DKM08_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02110;old_locus_tag=DKM08_02100 NZ_QFYX01000001.1 Protein Homology CDS 426288 426614 . + 0 ID=cds-WP_003403401.1;Parent=gene-DKM08_RS02110;Dbxref=GenBank:WP_003403401.1;Name=WP_003403401.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=DKM08_RS02110;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403401.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 426526 426864 . + . ID=gene-DKM08_RS02115;Name=DKM08_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02115;old_locus_tag=DKM08_02105 NZ_QFYX01000001.1 Protein Homology CDS 426526 426864 . + 0 ID=cds-WP_003403405.1;Parent=gene-DKM08_RS02115;Dbxref=GenBank:WP_003403405.1;Name=WP_003403405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215179.1;locus_tag=DKM08_RS02115;product=PIN domain-containing protein;protein_id=WP_003403405.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 426861 427034 . + . ID=gene-DKM08_RS02120;Name=DKM08_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02120;old_locus_tag=DKM08_02110 NZ_QFYX01000001.1 Protein Homology CDS 426861 427034 . + 0 ID=cds-WP_003898549.1;Parent=gene-DKM08_RS02120;Dbxref=GenBank:WP_003898549.1;Name=WP_003898549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215180.1;locus_tag=DKM08_RS02120;product=hypothetical protein;protein_id=WP_003898549.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 427532 431050 . + . ID=gene-DKM08_RS02130;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=DKM08_RS02130;old_locus_tag=DKM08_02120 NZ_QFYX01000001.1 Protein Homology CDS 427532 431050 . + 0 ID=cds-WP_003900992.1;Parent=gene-DKM08_RS02130;Dbxref=GenBank:WP_003900992.1;Name=WP_003900992.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215181.1;locus_tag=DKM08_RS02130;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_003900992.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 431095 435045 . + . ID=gene-DKM08_RS02135;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=DKM08_RS02135;old_locus_tag=DKM08_02125 NZ_QFYX01000001.1 Protein Homology CDS 431095 435045 . + 0 ID=cds-WP_003403413.1;Parent=gene-DKM08_RS02135;Dbxref=GenBank:WP_003403413.1;Name=WP_003403413.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892756.1;locus_tag=DKM08_RS02135;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_003403413.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 435122 435422 . + . ID=gene-DKM08_RS22480;Name=DKM08_RS22480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22480;partial=true;pseudo=true;start_range=.,435122 NZ_QFYX01000001.1 Protein Homology CDS 435122 435422 . + 0 ID=cds-DKM08_RS22480;Parent=gene-DKM08_RS22480;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585402.1;locus_tag=DKM08_RS22480;partial=true;product=amidase family protein;pseudo=true;start_range=.,435122;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 435409 437322 . - . ID=gene-DKM08_RS02145;Name=DKM08_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02145;old_locus_tag=DKM08_02135 NZ_QFYX01000001.1 Protein Homology CDS 435409 437322 . - 0 ID=cds-WP_010950430.1;Parent=gene-DKM08_RS02145;Dbxref=GenBank:WP_010950430.1;Name=WP_010950430.1;Ontology_term=GO:0046514,GO:0017040;gbkey=CDS;go_function=N-acylsphingosine amidohydrolase activity|0017040||IEA;go_process=ceramide catabolic process|0046514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215183.1;locus_tag=DKM08_RS02145;product=neutral ceramidase;protein_id=WP_010950430.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 437517 438275 . + . ID=gene-DKM08_RS02150;Name=end;gbkey=Gene;gene=end;gene_biotype=protein_coding;locus_tag=DKM08_RS02150;old_locus_tag=DKM08_02140 NZ_QFYX01000001.1 Protein Homology CDS 437517 438275 . + 0 ID=cds-WP_003403419.1;Parent=gene-DKM08_RS02150;Dbxref=GenBank:WP_003403419.1;Name=WP_003403419.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=end;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215184.1;locus_tag=DKM08_RS02150;product=deoxyribonuclease IV;protein_id=WP_003403419.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 438307 439149 . + . ID=gene-DKM08_RS02155;Name=lpqP;gbkey=Gene;gene=lpqP;gene_biotype=protein_coding;locus_tag=DKM08_RS02155;old_locus_tag=DKM08_02145 NZ_QFYX01000001.1 Protein Homology CDS 438307 439149 . + 0 ID=cds-WP_003403421.1;Parent=gene-DKM08_RS02155;Dbxref=GenBank:WP_003403421.1;Name=WP_003403421.1;Ontology_term=GO:0052689;gbkey=CDS;gene=lpqP;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215185.1;locus_tag=DKM08_RS02155;product=alpha/beta hydrolase family esterase;protein_id=WP_003403421.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 439209 440837 . + . ID=gene-DKM08_RS02160;Name=DKM08_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02160;old_locus_tag=DKM08_02150 NZ_QFYX01000001.1 Protein Homology CDS 439209 440837 . + 0 ID=cds-WP_003403423.1;Parent=gene-DKM08_RS02160;Dbxref=GenBank:WP_003403423.1;Name=WP_003403423.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215186.1;locus_tag=DKM08_RS02160;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403423.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 440848 441786 . + . ID=gene-DKM08_RS02165;Name=DKM08_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02165;old_locus_tag=DKM08_02155 NZ_QFYX01000001.1 Protein Homology CDS 440848 441786 . + 0 ID=cds-WP_003403426.1;Parent=gene-DKM08_RS02165;Dbxref=GenBank:WP_003403426.1;Name=WP_003403426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215187.1;locus_tag=DKM08_RS02165;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 441789 442511 . + . ID=gene-DKM08_RS02170;Name=DKM08_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02170;old_locus_tag=DKM08_02160 NZ_QFYX01000001.1 Protein Homology CDS 441789 442511 . + 0 ID=cds-WP_003403429.1;Parent=gene-DKM08_RS02170;Dbxref=GenBank:WP_003403429.1;Name=WP_003403429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215188.1;locus_tag=DKM08_RS02170;product=PaaX family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_003403429.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 442508 443299 . + . ID=gene-DKM08_RS02175;Name=DKM08_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02175;old_locus_tag=DKM08_02165 NZ_QFYX01000001.1 Protein Homology CDS 442508 443299 . + 0 ID=cds-WP_003403433.1;Parent=gene-DKM08_RS02175;Dbxref=GenBank:WP_003403433.1;Name=WP_003403433.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177745.1;locus_tag=DKM08_RS02175;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403433.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 443311 446205 . - . ID=gene-DKM08_RS02180;Name=mmpL5;gbkey=Gene;gene=mmpL5;gene_biotype=protein_coding;locus_tag=DKM08_RS02180;old_locus_tag=DKM08_02170 NZ_QFYX01000001.1 Protein Homology CDS 443311 446205 . - 0 ID=cds-WP_003900997.1;Parent=gene-DKM08_RS02180;Dbxref=GenBank:WP_003900997.1;Name=WP_003900997.1;gbkey=CDS;gene=mmpL5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215190.1;locus_tag=DKM08_RS02180;product=siderophore RND transporter MmpL5;protein_id=WP_003900997.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 446202 446630 . - . ID=gene-DKM08_RS02185;Name=mmpS5;gbkey=Gene;gene=mmpS5;gene_biotype=protein_coding;locus_tag=DKM08_RS02185;old_locus_tag=DKM08_02175 NZ_QFYX01000001.1 Protein Homology CDS 446202 446630 . - 0 ID=cds-WP_003403439.1;Parent=gene-DKM08_RS02185;Dbxref=GenBank:WP_003403439.1;Name=WP_003403439.1;gbkey=CDS;gene=mmpS5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215191.1;locus_tag=DKM08_RS02185;product=siderophore transporter accessory protein MmpS5;protein_id=WP_003403439.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 446715 447212 . + . ID=gene-DKM08_RS02190;Name=mmpR5;gbkey=Gene;gene=mmpR5;gene_biotype=protein_coding;locus_tag=DKM08_RS02190;old_locus_tag=DKM08_02180 NZ_QFYX01000001.1 Protein Homology CDS 446715 447212 . + 0 ID=cds-WP_147020871.1;Parent=gene-DKM08_RS02190;Dbxref=GenBank:WP_147020871.1;Name=WP_147020871.1;gbkey=CDS;gene=mmpR5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215192.1;locus_tag=DKM08_RS02190;product=siderophore transport transcriptional regulator MmpR5;protein_id=WP_147020871.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 447268 447765 . - . ID=gene-DKM08_RS02195;Name=DKM08_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02195;old_locus_tag=DKM08_02185 NZ_QFYX01000001.1 Protein Homology CDS 447268 447765 . - 0 ID=cds-WP_003403446.1;Parent=gene-DKM08_RS02195;Dbxref=GenBank:WP_003403446.1;Name=WP_003403446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215193.1;locus_tag=DKM08_RS02195;product=DUF3060 domain-containing protein;protein_id=WP_003403446.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 447767 448141 . - . ID=gene-DKM08_RS02200;Name=DKM08_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02200;old_locus_tag=DKM08_02190 NZ_QFYX01000001.1 Protein Homology CDS 447767 448141 . - 0 ID=cds-WP_003403448.1;Parent=gene-DKM08_RS02200;Dbxref=GenBank:WP_003403448.1;Name=WP_003403448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215194.1;locus_tag=DKM08_RS02200;product=DUF3060 domain-containing protein;protein_id=WP_003403448.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 448446 449036 . + . ID=gene-DKM08_RS02205;Name=DKM08_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02205;old_locus_tag=DKM08_02195 NZ_QFYX01000001.1 Protein Homology CDS 448446 449036 . + 0 ID=cds-WP_003403451.1;Parent=gene-DKM08_RS02205;Dbxref=GenBank:WP_003403451.1;Name=WP_003403451.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215195.1;locus_tag=DKM08_RS02205;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403451.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 449285 449659 . + . ID=gene-DKM08_RS02210;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=DKM08_RS02210;old_locus_tag=DKM08_02200 NZ_QFYX01000001.1 Protein Homology CDS 449285 449659 . + 0 ID=cds-WP_003403453.1;Parent=gene-DKM08_RS02210;Dbxref=GenBank:WP_003403453.1;Name=WP_003403453.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215196.1;locus_tag=DKM08_RS02210;product=30S ribosomal protein S12;protein_id=WP_003403453.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 449659 450129 . + . ID=gene-DKM08_RS02215;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=DKM08_RS02215;old_locus_tag=DKM08_02205 NZ_QFYX01000001.1 Protein Homology CDS 449659 450129 . + 0 ID=cds-WP_003403456.1;Parent=gene-DKM08_RS02215;Dbxref=GenBank:WP_003403456.1;Name=WP_003403456.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084986.1;locus_tag=DKM08_RS02215;product=30S ribosomal protein S7;protein_id=WP_003403456.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 450210 452315 . + . ID=gene-DKM08_RS02220;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DKM08_RS02220;old_locus_tag=DKM08_02210 NZ_QFYX01000001.1 Protein Homology CDS 450210 452315 . + 0 ID=cds-WP_003898554.1;Parent=gene-DKM08_RS02220;Dbxref=GenBank:WP_003898554.1;Name=WP_003898554.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177746.1;locus_tag=DKM08_RS02220;product=elongation factor G;protein_id=WP_003898554.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 452546 453736 . + . ID=gene-DKM08_RS02225;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DKM08_RS02225;old_locus_tag=DKM08_02215 NZ_QFYX01000001.1 Protein Homology CDS 452546 453736 . + 0 ID=cds-WP_003403463.1;Parent=gene-DKM08_RS02225;Dbxref=GenBank:WP_003403463.1;Name=WP_003403463.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005055596.1;locus_tag=DKM08_RS02225;product=elongation factor Tu;protein_id=WP_003403463.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 453874 454671 . + . ID=gene-DKM08_RS02230;Name=DKM08_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02230;old_locus_tag=DKM08_02220 NZ_QFYX01000001.1 Protein Homology CDS 453874 454671 . + 0 ID=cds-WP_010950431.1;Parent=gene-DKM08_RS02230;Dbxref=GenBank:WP_010950431.1;Name=WP_010950431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215200.1;locus_tag=DKM08_RS02230;product=SHOCT domain-containing protein;protein_id=WP_010950431.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 454824 455651 . + . ID=gene-DKM08_RS02235;Name=DKM08_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02235;old_locus_tag=DKM08_02225 NZ_QFYX01000001.1 Protein Homology CDS 454824 455651 . + 0 ID=cds-WP_003403468.1;Parent=gene-DKM08_RS02235;Dbxref=GenBank:WP_003403468.1;Name=WP_003403468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215201.1;locus_tag=DKM08_RS02235;product=Rv0687 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003403468.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 455665 456885 . + . ID=gene-DKM08_RS02240;Name=DKM08_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02240;old_locus_tag=DKM08_02230 NZ_QFYX01000001.1 Protein Homology CDS 455665 456885 . + 0 ID=cds-WP_003901000.1;Parent=gene-DKM08_RS02240;Dbxref=GenBank:WP_003901000.1;Name=WP_003901000.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215202.1;locus_tag=DKM08_RS02240;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003901000.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 456882 457136 . - . ID=gene-DKM08_RS02245;Name=DKM08_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02245;old_locus_tag=DKM08_02235 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 456882 457136 . - 0 ID=cds-WP_003403474.1;Parent=gene-DKM08_RS02245;Dbxref=GenBank:WP_003403474.1;Name=WP_003403474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS02245;product=hypothetical protein;protein_id=WP_003403474.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 457749 458798 . - . ID=gene-DKM08_RS02255;Name=DKM08_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02255;old_locus_tag=DKM08_02245 NZ_QFYX01000001.1 Protein Homology CDS 457749 458798 . - 0 ID=cds-WP_003403477.1;Parent=gene-DKM08_RS02255;Dbxref=GenBank:WP_003403477.1;Name=WP_003403477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215204.1;locus_tag=DKM08_RS02255;product=DUF2332 domain-containing protein;protein_id=WP_003403477.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 458795 459391 . - . ID=gene-DKM08_RS02260;Name=mftR;gbkey=Gene;gene=mftR;gene_biotype=protein_coding;locus_tag=DKM08_RS02260;old_locus_tag=DKM08_02250 NZ_QFYX01000001.1 Protein Homology CDS 458795 459391 . - 0 ID=cds-WP_003403482.1;Parent=gene-DKM08_RS02260;Dbxref=GenBank:WP_003403482.1;Name=WP_003403482.1;Note=MftR%2C the mycofactocin system transcriptional regulator%2C is an uncharacterized TetR family DNA-binding transcription factor. Its role is inferred by context. It occurs as part of the biosynthesis locus for mycofactocin%2C a partially characterized electron carrier derived from the terminal Val-Tyr dipeptide of the precursor peptide MftA%2C through a radical SAM enzyme-mediated process.;Ontology_term=GO:0006355,GO:0003700,GO:0036042;gbkey=CDS;gene=mftR;go_function=DNA-binding transcription factor activity|0003700||IEA,long-chain fatty acyl-CoA binding|0036042||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215205.1;locus_tag=DKM08_RS02260;product=mycofactocin system transcriptional regulator;protein_id=WP_003403482.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 459482 459571 . + . ID=gene-DKM08_RS02265;Name=mftA;gbkey=Gene;gene=mftA;gene_biotype=protein_coding;locus_tag=DKM08_RS02265;old_locus_tag=DKM08_02255 NZ_QFYX01000001.1 Protein Homology CDS 459482 459571 . + 0 ID=cds-WP_003403483.1;Parent=gene-DKM08_RS02265;Dbxref=GenBank:WP_003403483.1;Name=WP_003403483.1;Note=Mycofactocin is a small molecule electron carrier derived from the final two amino acids%2C Val-Tyr%2C of MftA%2C the mycofactocin precursor. It plays a role in redox homeostasis and the metabolism of alcohols and aldehydes in Actinobacteria%2C including Mycobacterium tuberculosis.;Ontology_term=GO:0140604,GO:0009055;gbkey=CDS;gene=mftA;go_function=electron transfer activity|0009055||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409348.2;locus_tag=DKM08_RS02265;product=mycofactocin precursor MftA;protein_id=WP_003403483.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 459556 459885 . + . ID=gene-DKM08_RS02270;Name=mftB;gbkey=Gene;gene=mftB;gene_biotype=protein_coding;locus_tag=DKM08_RS02270;old_locus_tag=DKM08_02260 NZ_QFYX01000001.1 Protein Homology CDS 459556 459885 . + 0 ID=cds-WP_003403486.1;Parent=gene-DKM08_RS02270;Dbxref=GenBank:WP_003403486.1;Name=WP_003403486.1;Note=MftB%2C a small protein%2C is a peptide chaperone that assists the radical SAM enzyme MftC in performing two modifications to the C-terminal Val-Tyr dipeptide of the mycofactocin precursor peptide%2C MftA. MftB's role is analogous to the role of PqqD in the biosynthesis of PQQ%2C a cofactor that derives entirely from a Tyr and a Glu in the precursor PqqA.;Ontology_term=GO:0140604;gbkey=CDS;gene=mftB;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215206.1;locus_tag=DKM08_RS02270;product=mycofactocin biosynthesis chaperone MftB;protein_id=WP_003403486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 459882 461057 . + . ID=gene-DKM08_RS02275;Name=mftC;gbkey=Gene;gene=mftC;gene_biotype=protein_coding;locus_tag=DKM08_RS02275;old_locus_tag=DKM08_02265 NZ_QFYX01000001.1 Protein Homology CDS 459882 461057 . + 0 ID=cds-WP_003403490.1;Parent=gene-DKM08_RS02275;Dbxref=GenBank:WP_003403490.1;Name=WP_003403490.1;Note=MftC is a radical SAM/SPASM enzyme that catalyzes the first two steps in biosynthesis of the electron carrier mycofactocin from the terminal Val-Tyr dipeptide of the precursor peptide MftA.;Ontology_term=GO:0031179,GO:0140604,GO:0051539;gbkey=CDS;gene=mftC;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide modification|0031179||IEA,mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215207.1;locus_tag=DKM08_RS02275;product=mycofactocin radical SAM maturase;protein_id=WP_003403490.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 461060 462250 . + . ID=gene-DKM08_RS02280;Name=mftD;gbkey=Gene;gene=mftD;gene_biotype=protein_coding;locus_tag=DKM08_RS02280;old_locus_tag=DKM08_02270 NZ_QFYX01000001.1 Protein Homology CDS 461060 462250 . + 0 ID=cds-WP_003898557.1;Parent=gene-DKM08_RS02280;Dbxref=GenBank:WP_003898557.1;Name=WP_003898557.1;Note=MftD%2C an enzyme found in the mycofactocin biosynthesis locus%2C performs an oxidative deamination of 3-amino-5-[(p-hydroxyphenyl)methyl]-4%2C4-dimethyl-2-pyrrolidinone (AHDP). The resulting compound%2C now called pre-mycofactocin (PMFT)%2C is a biologically active redox cofactor that can oxidize the non-exchangeable NADH of TIGR03971 family SDR-type oxidoreductases.;Ontology_term=GO:0140604;gbkey=CDS;gene=mftD;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215208.1;locus_tag=DKM08_RS02280;product=pre-mycofactocin synthase MftD;protein_id=WP_003898557.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 462440 463195 . + . ID=gene-DKM08_RS02285;Name=mftE;gbkey=Gene;gene=mftE;gene_biotype=protein_coding;locus_tag=DKM08_RS02285;old_locus_tag=DKM08_02275 NZ_QFYX01000001.1 Protein Homology CDS 462440 463195 . + 0 ID=cds-WP_003403497.1;Parent=gene-DKM08_RS02285;Dbxref=GenBank:WP_003403497.1;Name=WP_003403497.1;Ontology_term=GO:0140604;gbkey=CDS;gene=mftE;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215209.1;locus_tag=DKM08_RS02285;product=mycofactocin biosynthesis peptidyl-dipeptidase MftE;protein_id=WP_003403497.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 463244 464656 . + . ID=gene-DKM08_RS02290;Name=mftF;gbkey=Gene;gene=mftF;gene_biotype=protein_coding;locus_tag=DKM08_RS02290;old_locus_tag=DKM08_02280 NZ_QFYX01000001.1 Protein Homology CDS 463244 464656 . + 0 ID=cds-WP_003403501.1;Parent=gene-DKM08_RS02290;Dbxref=GenBank:WP_003403501.1;Name=WP_003403501.1;Note=Members of this protein family%2C MftF%2C are glycosyltransferases%2C members of PF00535 (glycosyl transferase family 2). The encoding gene is found as part of the mycofactocin cassette%2C in Mycobacterium tuberculosis%2C many other Actinobacteria%2C and occasional members of other lineages. Mycofactocin itself%2C a putative redox carrier%2C is a heavily modified derivative of the C-terminal Val-Tyr dipeptide of the mycofactocin precursor MftA (TIGR03969).;Ontology_term=GO:0140604,GO:0016740;gbkey=CDS;gene=mftF;go_function=transferase activity|0016740||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215210.1;locus_tag=DKM08_RS02290;product=mycofactocin biosynthesis glycosyltransferase MftF;protein_id=WP_003403501.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 464658 466097 . + . ID=gene-DKM08_RS02295;Name=mftG;gbkey=Gene;gene=mftG;gene_biotype=protein_coding;locus_tag=DKM08_RS02295;old_locus_tag=DKM08_02285 NZ_QFYX01000001.1 Protein Homology CDS 464658 466097 . + 0 ID=cds-WP_003403503.1;Parent=gene-DKM08_RS02295;Dbxref=GenBank:WP_003403503.1;Name=WP_003403503.1;Ontology_term=GO:0016614;gbkey=CDS;gene=mftG;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215211.1;locus_tag=DKM08_RS02295;product=mycofactocin dehydrogenase MftG;protein_id=WP_003403503.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 466373 466519 . + . ID=gene-DKM08_RS02305;Name=DKM08_RS02305;end_range=466519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02305;old_locus_tag=DKM08_02295;partial=true;pseudo=true;start_range=.,466373 NZ_QFYX01000001.1 Protein Homology CDS 466373 466519 . + 0 ID=cds-DKM08_RS02305;Parent=gene-DKM08_RS02305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=466519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491516.1;locus_tag=DKM08_RS02305;partial=true;product=transposase;pseudo=true;start_range=.,466373;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 467353 467574 . + . ID=gene-DKM08_RS02320;Name=DKM08_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02320;old_locus_tag=DKM08_02310 NZ_QFYX01000001.1 Protein Homology CDS 467353 467574 . + 0 ID=cds-WP_003403569.1;Parent=gene-DKM08_RS02320;Dbxref=GenBank:WP_003403569.1;Name=WP_003403569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215213.1;locus_tag=DKM08_RS02320;product=hypothetical protein;protein_id=WP_003403569.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 467828 468058 . - . ID=gene-DKM08_RS21920;Name=DKM08_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21920;old_locus_tag=DKM08_02315 NZ_QFYX01000001.1 Protein Homology CDS 467828 468058 . - 0 ID=cds-WP_003403573.1;Parent=gene-DKM08_RS21920;Dbxref=GenBank:WP_003403573.1;Name=WP_003403573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403573.1;locus_tag=DKM08_RS21920;product=hypothetical protein;protein_id=WP_003403573.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 468211 468516 . + . ID=gene-DKM08_RS02330;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=DKM08_RS02330;old_locus_tag=DKM08_02320 NZ_QFYX01000001.1 Protein Homology CDS 468211 468516 . + 0 ID=cds-WP_003403578.1;Parent=gene-DKM08_RS02330;Dbxref=GenBank:WP_003403578.1;Name=WP_003403578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009948626.1;locus_tag=DKM08_RS02330;product=30S ribosomal protein S10;protein_id=WP_003403578.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 468533 469186 . + . ID=gene-DKM08_RS02335;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=DKM08_RS02335;old_locus_tag=DKM08_02325 NZ_QFYX01000001.1 Protein Homology CDS 468533 469186 . + 0 ID=cds-WP_003403579.1;Parent=gene-DKM08_RS02335;Dbxref=GenBank:WP_003403579.1;Name=WP_003403579.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215215.1;locus_tag=DKM08_RS02335;product=50S ribosomal protein L3;protein_id=WP_003403579.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 469186 469857 . + . ID=gene-DKM08_RS02340;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=DKM08_RS02340;old_locus_tag=DKM08_02330 NZ_QFYX01000001.1 Protein Homology CDS 469186 469857 . + 0 ID=cds-WP_003403580.1;Parent=gene-DKM08_RS02340;Dbxref=GenBank:WP_003403580.1;Name=WP_003403580.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215216.1;locus_tag=DKM08_RS02340;product=50S ribosomal protein L4;protein_id=WP_003403580.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 469857 470159 . + . ID=gene-DKM08_RS02345;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=DKM08_RS02345;old_locus_tag=DKM08_02335 NZ_QFYX01000001.1 Protein Homology CDS 469857 470159 . + 0 ID=cds-WP_003403581.1;Parent=gene-DKM08_RS02345;Dbxref=GenBank:WP_003403581.1;Name=WP_003403581.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215217.1;locus_tag=DKM08_RS02345;product=50S ribosomal protein L23;protein_id=WP_003403581.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 470306 471148 . + . ID=gene-DKM08_RS02350;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=DKM08_RS02350;old_locus_tag=DKM08_02340 NZ_QFYX01000001.1 Protein Homology CDS 470306 471148 . + 0 ID=cds-WP_003403582.1;Parent=gene-DKM08_RS02350;Dbxref=GenBank:WP_003403582.1;Name=WP_003403582.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215218.1;locus_tag=DKM08_RS02350;product=50S ribosomal protein L2;protein_id=WP_003403582.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 471189 471470 . + . ID=gene-DKM08_RS02355;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=DKM08_RS02355;old_locus_tag=DKM08_02345 NZ_QFYX01000001.1 Protein Homology CDS 471189 471470 . + 0 ID=cds-WP_003403584.1;Parent=gene-DKM08_RS02355;Dbxref=GenBank:WP_003403584.1;Name=WP_003403584.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215219.1;locus_tag=DKM08_RS02355;product=30S ribosomal protein S19;protein_id=WP_003403584.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 471467 472045 . + . ID=gene-DKM08_RS02360;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=DKM08_RS02360;old_locus_tag=DKM08_02350 NZ_QFYX01000001.1 Protein Homology CDS 471467 472045 . + 0 ID=cds-WP_147020873.1;Parent=gene-DKM08_RS02360;Dbxref=GenBank:WP_147020873.1;Name=WP_147020873.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215220.1;locus_tag=DKM08_RS02360;product=50S ribosomal protein L22;protein_id=WP_147020873.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 472045 472869 . + . ID=gene-DKM08_RS02365;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=DKM08_RS02365;old_locus_tag=DKM08_02355 NZ_QFYX01000001.1 Protein Homology CDS 472045 472869 . + 0 ID=cds-WP_003403590.1;Parent=gene-DKM08_RS02365;Dbxref=GenBank:WP_003403590.1;Name=WP_003403590.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215221.1;locus_tag=DKM08_RS02365;product=30S ribosomal protein S3;protein_id=WP_003403590.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 472873 473289 . + . ID=gene-DKM08_RS02370;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=DKM08_RS02370;old_locus_tag=DKM08_02360 NZ_QFYX01000001.1 Protein Homology CDS 472873 473289 . + 0 ID=cds-WP_003403592.1;Parent=gene-DKM08_RS02370;Dbxref=GenBank:WP_003403592.1;Name=WP_003403592.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215222.1;locus_tag=DKM08_RS02370;product=50S ribosomal protein L16;protein_id=WP_003403592.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 473289 473522 . + . ID=gene-DKM08_RS02375;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=DKM08_RS02375;old_locus_tag=DKM08_02365 NZ_QFYX01000001.1 Protein Homology CDS 473289 473522 . + 0 ID=cds-WP_003403594.1;Parent=gene-DKM08_RS02375;Dbxref=GenBank:WP_003403594.1;Name=WP_003403594.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215223.1;locus_tag=DKM08_RS02375;product=50S ribosomal protein L29;protein_id=WP_003403594.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 473519 473929 . + . ID=gene-DKM08_RS02380;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=DKM08_RS02380;old_locus_tag=DKM08_02370 NZ_QFYX01000001.1 Protein Homology CDS 473519 473929 . + 0 ID=cds-WP_003403596.1;Parent=gene-DKM08_RS02380;Dbxref=GenBank:WP_003403596.1;Name=WP_003403596.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215224.1;locus_tag=DKM08_RS02380;product=30S ribosomal protein S17;protein_id=WP_003403596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 474098 476461 . + . ID=gene-DKM08_RS02385;Name=atsA;gbkey=Gene;gene=atsA;gene_biotype=protein_coding;locus_tag=DKM08_RS02385;old_locus_tag=DKM08_02375 NZ_QFYX01000001.1 Protein Homology CDS 474098 476461 . + 0 ID=cds-WP_003898561.1;Parent=gene-DKM08_RS02385;Dbxref=GenBank:WP_003898561.1;Name=WP_003898561.1;gbkey=CDS;gene=atsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215225.1;locus_tag=DKM08_RS02385;product=arylsulfatase AtsA;protein_id=WP_003898561.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 476509 477408 . + . ID=gene-DKM08_RS02390;Name=DKM08_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02390;old_locus_tag=DKM08_02380 NZ_QFYX01000001.1 Protein Homology CDS 476509 477408 . + 0 ID=cds-WP_003403610.1;Parent=gene-DKM08_RS02390;Dbxref=GenBank:WP_003403610.1;Name=WP_003403610.1;Ontology_term=GO:0016670,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C oxygen as acceptor|0016670||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215226.1;locus_tag=DKM08_RS02390;product=formylglycine-generating enzyme family protein;protein_id=WP_003403610.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 477709 478650 . + . ID=gene-DKM08_RS02395;Name=DKM08_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02395;old_locus_tag=DKM08_02385 NZ_QFYX01000001.1 Protein Homology CDS 477709 478650 . + 0 ID=cds-WP_003898562.1;Parent=gene-DKM08_RS02395;Dbxref=GenBank:WP_003898562.1;Name=WP_003898562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215227.1;locus_tag=DKM08_RS02395;product=DUF4436 domain-containing protein;protein_id=WP_003898562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 479136 479504 . + . ID=gene-DKM08_RS02400;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=DKM08_RS02400;old_locus_tag=DKM08_02390 NZ_QFYX01000001.1 Protein Homology CDS 479136 479504 . + 0 ID=cds-WP_003403649.1;Parent=gene-DKM08_RS02400;Dbxref=GenBank:WP_003403649.1;Name=WP_003403649.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=DKM08_RS02400;product=50S ribosomal protein L14;protein_id=WP_003403649.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 479505 479822 . + . ID=gene-DKM08_RS02405;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=DKM08_RS02405;old_locus_tag=DKM08_02395 NZ_QFYX01000001.1 Protein Homology CDS 479505 479822 . + 0 ID=cds-WP_003403654.1;Parent=gene-DKM08_RS02405;Dbxref=GenBank:WP_003403654.1;Name=WP_003403654.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215229.1;locus_tag=DKM08_RS02405;product=50S ribosomal protein L24;protein_id=WP_003403654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 479822 480385 . + . ID=gene-DKM08_RS02410;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=DKM08_RS02410;old_locus_tag=DKM08_02400 NZ_QFYX01000001.1 Protein Homology CDS 479822 480385 . + 0 ID=cds-WP_003403660.1;Parent=gene-DKM08_RS02410;Dbxref=GenBank:WP_003403660.1;Name=WP_003403660.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215230.1;locus_tag=DKM08_RS02410;product=50S ribosomal protein L5;protein_id=WP_003403660.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 480390 480575 . + . ID=gene-DKM08_RS02415;Name=DKM08_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02415;old_locus_tag=DKM08_02405 NZ_QFYX01000001.1 Protein Homology CDS 480390 480575 . + 0 ID=cds-WP_003403667.1;Parent=gene-DKM08_RS02415;Dbxref=GenBank:WP_003403667.1;Name=WP_003403667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1;locus_tag=DKM08_RS02415;product=type Z 30S ribosomal protein S14;protein_id=WP_003403667.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 480739 481137 . + . ID=gene-DKM08_RS02420;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=DKM08_RS02420;old_locus_tag=DKM08_02410 NZ_QFYX01000001.1 Protein Homology CDS 480739 481137 . + 0 ID=cds-WP_003403669.1;Parent=gene-DKM08_RS02420;Dbxref=GenBank:WP_003403669.1;Name=WP_003403669.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908572.1;locus_tag=DKM08_RS02420;product=30S ribosomal protein S8;protein_id=WP_003403669.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 481161 481700 . + . ID=gene-DKM08_RS02425;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=DKM08_RS02425;old_locus_tag=DKM08_02415 NZ_QFYX01000001.1 Protein Homology CDS 481161 481700 . + 0 ID=cds-WP_003403673.1;Parent=gene-DKM08_RS02425;Dbxref=GenBank:WP_003403673.1;Name=WP_003403673.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908571.1;locus_tag=DKM08_RS02425;product=50S ribosomal protein L6;protein_id=WP_003403673.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 481703 482071 . + . ID=gene-DKM08_RS02430;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=DKM08_RS02430;old_locus_tag=DKM08_02420 NZ_QFYX01000001.1 Protein Homology CDS 481703 482071 . + 0 ID=cds-WP_003403677.1;Parent=gene-DKM08_RS02430;Dbxref=GenBank:WP_003403677.1;Name=WP_003403677.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215234.1;locus_tag=DKM08_RS02430;product=50S ribosomal protein L18;protein_id=WP_003403677.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 482091 482753 . + . ID=gene-DKM08_RS02435;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=DKM08_RS02435;old_locus_tag=DKM08_02425 NZ_QFYX01000001.1 Protein Homology CDS 482091 482753 . + 0 ID=cds-WP_003403680.1;Parent=gene-DKM08_RS02435;Dbxref=GenBank:WP_003403680.1;Name=WP_003403680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215235.1;locus_tag=DKM08_RS02435;product=30S ribosomal protein S5;protein_id=WP_003403680.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 482756 482953 . + . ID=gene-DKM08_RS02440;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=DKM08_RS02440;old_locus_tag=DKM08_02430 NZ_QFYX01000001.1 Protein Homology CDS 482756 482953 . + 0 ID=cds-WP_003403683.1;Parent=gene-DKM08_RS02440;Dbxref=GenBank:WP_003403683.1;Name=WP_003403683.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215236.1;locus_tag=DKM08_RS02440;product=50S ribosomal protein L30;protein_id=WP_003403683.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 482953 483393 . + . ID=gene-DKM08_RS02445;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=DKM08_RS02445;old_locus_tag=DKM08_02435 NZ_QFYX01000001.1 Protein Homology CDS 482953 483393 . + 0 ID=cds-WP_003403685.1;Parent=gene-DKM08_RS02445;Dbxref=GenBank:WP_003403685.1;Name=WP_003403685.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215237.1;locus_tag=DKM08_RS02445;product=50S ribosomal protein L15;protein_id=WP_003403685.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 483495 485297 . + . ID=gene-DKM08_RS02450;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=DKM08_RS02450;old_locus_tag=DKM08_02440 NZ_QFYX01000001.1 Protein Homology CDS 483495 485297 . + 0 ID=cds-WP_003403686.1;Parent=gene-DKM08_RS02450;Dbxref=GenBank:WP_003403686.1;Name=WP_003403686.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879455.1;locus_tag=DKM08_RS02450;product=signal peptide peptidase SppA;protein_id=WP_003403686.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 485294 486207 . - . ID=gene-DKM08_RS02455;Name=DKM08_RS02455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02455;old_locus_tag=DKM08_02445;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 485294 486207 . - 0 ID=cds-DKM08_RS02455;Parent=gene-DKM08_RS02455;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727409.1;locus_tag=DKM08_RS02455;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 486300 487403 . - . ID=gene-DKM08_RS02460;Name=DKM08_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02460;old_locus_tag=DKM08_02450 NZ_QFYX01000001.1 Protein Homology CDS 486300 487403 . - 0 ID=cds-WP_003403691.1;Parent=gene-DKM08_RS02460;Dbxref=GenBank:WP_003403691.1;Name=WP_003403691.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215240.1;locus_tag=DKM08_RS02460;product=class I SAM-dependent methyltransferase;protein_id=WP_003403691.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 487606 488262 . - . ID=gene-DKM08_RS02465;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=DKM08_RS02465;old_locus_tag=DKM08_02455 NZ_QFYX01000001.1 Protein Homology CDS 487606 488262 . - 0 ID=cds-WP_003403695.1;Parent=gene-DKM08_RS02465;Dbxref=GenBank:WP_003403695.1;Name=WP_003403695.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215241.1;locus_tag=DKM08_RS02465;product=L-fuculose-phosphate aldolase;protein_id=WP_003403695.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 488259 489239 . - . ID=gene-DKM08_RS02470;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=DKM08_RS02470;old_locus_tag=DKM08_02460 NZ_QFYX01000001.1 Protein Homology CDS 488259 489239 . - 0 ID=cds-WP_003403698.1;Parent=gene-DKM08_RS02470;Dbxref=GenBank:WP_003403698.1;Name=WP_003403698.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215242.1;locus_tag=DKM08_RS02470;product=D-3-phosphoglycerate dehydrogenase SerA;protein_id=WP_003403698.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 489270 490616 . + . ID=gene-DKM08_RS02475;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=DKM08_RS02475;old_locus_tag=DKM08_02465 NZ_QFYX01000001.1 Protein Homology CDS 489270 490616 . + 0 ID=cds-WP_003403701.1;Parent=gene-DKM08_RS02475;Dbxref=GenBank:WP_003403701.1;Name=WP_003403701.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215243.1;locus_tag=DKM08_RS02475;product=xylulokinase;protein_id=WP_003403701.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 490671 491357 . + . ID=gene-DKM08_RS02480;Name=DKM08_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02480;old_locus_tag=DKM08_02470 NZ_QFYX01000001.1 Protein Homology CDS 490671 491357 . + 0 ID=cds-WP_009935961.1;Parent=gene-DKM08_RS02480;Dbxref=GenBank:WP_009935961.1;Name=WP_009935961.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935961.1;locus_tag=DKM08_RS02480;product=GNAT family N-acetyltransferase;protein_id=WP_009935961.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 491446 492402 . - . ID=gene-DKM08_RS02485;Name=DKM08_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02485;old_locus_tag=DKM08_02475 NZ_QFYX01000001.1 Protein Homology CDS 491446 492402 . - 0 ID=cds-WP_147020875.1;Parent=gene-DKM08_RS02485;Dbxref=GenBank:WP_147020875.1;Name=WP_147020875.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215245.1;locus_tag=DKM08_RS02485;product=class I SAM-dependent methyltransferase;protein_id=WP_147020875.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 492563 493888 . + . ID=gene-DKM08_RS02490;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=DKM08_RS02490;old_locus_tag=DKM08_02480 NZ_QFYX01000001.1 Protein Homology CDS 492563 493888 . + 0 ID=cds-WP_003403723.1;Parent=gene-DKM08_RS02490;Dbxref=GenBank:WP_003403723.1;Name=WP_003403723.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215246.1;locus_tag=DKM08_RS02490;product=preprotein translocase subunit SecY;protein_id=WP_003403723.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 493885 494430 . + . ID=gene-DKM08_RS02495;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=DKM08_RS02495;old_locus_tag=DKM08_02485 NZ_QFYX01000001.1 Protein Homology CDS 493885 494430 . + 0 ID=cds-WP_003403726.1;Parent=gene-DKM08_RS02495;Dbxref=GenBank:WP_003403726.1;Name=WP_003403726.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;gene=adk;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215247.1;locus_tag=DKM08_RS02495;product=adenylate kinase;protein_id=WP_003403726.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 494433 495233 . + . ID=gene-DKM08_RS02500;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=DKM08_RS02500;old_locus_tag=DKM08_02490 NZ_QFYX01000001.1 Protein Homology CDS 494433 495233 . + 0 ID=cds-WP_003403728.1;Parent=gene-DKM08_RS02500;Dbxref=GenBank:WP_003403728.1;Name=WP_003403728.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177748.1;locus_tag=DKM08_RS02500;product=type I methionyl aminopeptidase;protein_id=WP_003403728.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 495306 495839 . + . ID=gene-DKM08_RS02505;Name=sigL;gbkey=Gene;gene=sigL;gene_biotype=protein_coding;locus_tag=DKM08_RS02505;old_locus_tag=DKM08_02495 NZ_QFYX01000001.1 Protein Homology CDS 495306 495839 . + 0 ID=cds-WP_003403731.1;Parent=gene-DKM08_RS02505;Dbxref=GenBank:WP_003403731.1;Name=WP_003403731.1;gbkey=CDS;gene=sigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215249.1;locus_tag=DKM08_RS02505;product=sigma-70 family RNA polymerase sigma factor SigL;protein_id=WP_003403731.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 495903 496655 . + . ID=gene-DKM08_RS02510;Name=rslA;gbkey=Gene;gene=rslA;gene_biotype=protein_coding;locus_tag=DKM08_RS02510;old_locus_tag=DKM08_02500 NZ_QFYX01000001.1 Protein Homology CDS 495903 496655 . + 0 ID=cds-WP_003403733.1;Parent=gene-DKM08_RS02510;Dbxref=GenBank:WP_003403733.1;Name=WP_003403733.1;gbkey=CDS;gene=rslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215250.1;locus_tag=DKM08_RS02510;product=anti-sigma-L factor RslA;protein_id=WP_003403733.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 496710 496922 . + . ID=gene-DKM08_RS02515;Name=DKM08_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02515;old_locus_tag=DKM08_02505 NZ_QFYX01000001.1 Protein Homology CDS 496710 496922 . + 0 ID=cds-WP_003898567.1;Parent=gene-DKM08_RS02515;Dbxref=GenBank:WP_003898567.1;Name=WP_003898567.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898567.1;locus_tag=DKM08_RS02515;product=thiamine pyrophosphate-binding protein;protein_id=WP_003898567.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 496970 497467 . + . ID=gene-DKM08_RS02520;Name=DKM08_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02520;old_locus_tag=DKM08_02510 NZ_QFYX01000001.1 Protein Homology CDS 496970 497467 . + 0 ID=cds-WP_003403738.1;Parent=gene-DKM08_RS02520;Dbxref=GenBank:WP_003403738.1;Name=WP_003403738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215251.1;locus_tag=DKM08_RS02520;product=MarR family transcriptional regulator;protein_id=WP_003403738.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 497464 497676 . + . ID=gene-DKM08_RS02525;Name=DKM08_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02525;old_locus_tag=DKM08_02515 NZ_QFYX01000001.1 Protein Homology CDS 497464 497676 . + 0 ID=cds-WP_003906436.1;Parent=gene-DKM08_RS02525;Dbxref=GenBank:WP_003906436.1;Name=WP_003906436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=DKM08_RS02525;product=PE domain-containing protein;protein_id=WP_003906436.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 497825 498373 . + . ID=gene-DKM08_RS02530;Name=DKM08_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02530;old_locus_tag=DKM08_02520 NZ_QFYX01000001.1 Protein Homology CDS 497825 498373 . + 0 ID=cds-WP_003403741.1;Parent=gene-DKM08_RS02530;Dbxref=GenBank:WP_003403741.1;Name=WP_003403741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215252.1;locus_tag=DKM08_RS02530;product=TIGR03086 family metal-binding protein;protein_id=WP_003403741.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 498393 498536 . - . ID=gene-DKM08_RS02535;Name=DKM08_RS02535;end_range=498536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02535;old_locus_tag=DKM08_02525;partial=true;pseudo=true;start_range=.,498393 NZ_QFYX01000001.1 Protein Homology CDS 498393 498536 . - 0 ID=cds-DKM08_RS02535;Parent=gene-DKM08_RS02535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=498536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403844.1;locus_tag=DKM08_RS02535;partial=true;product=3-hydroxyisobutyrate dehydrogenase;pseudo=true;start_range=.,498393;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 498618 499426 . + . ID=gene-DKM08_RS02540;Name=DKM08_RS02540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02540;old_locus_tag=DKM08_02530;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 498618 499426 . + 0 ID=cds-DKM08_RS02540;Parent=gene-DKM08_RS02540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215253.1;locus_tag=DKM08_RS02540;product=DUF4226 domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 499541 500068 . + . ID=gene-DKM08_RS02545;Name=DKM08_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02545;old_locus_tag=DKM08_02535 NZ_QFYX01000001.1 Protein Homology CDS 499541 500068 . + 0 ID=cds-WP_003901008.1;Parent=gene-DKM08_RS02545;Dbxref=GenBank:WP_003901008.1;Name=WP_003901008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215254.1;locus_tag=DKM08_RS02545;product=hypothetical protein;protein_id=WP_003901008.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 500290 500613 . + . ID=gene-DKM08_RS02550;Name=DKM08_RS02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02550;old_locus_tag=DKM08_02540;partial=true;pseudo=true;start_range=.,500290 NZ_QFYX01000001.1 Protein Homology CDS 500290 500613 . + 0 ID=cds-DKM08_RS02550;Parent=gene-DKM08_RS02550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=DKM08_RS02550;partial=true;product=transposase;pseudo=true;start_range=.,500290;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 500746 501371 . + . ID=gene-DKM08_RS02555;Name=DKM08_RS02555;end_range=501371,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02555;old_locus_tag=DKM08_02545;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 500746 501371 . + 0 ID=cds-DKM08_RS02555;Parent=gene-DKM08_RS02555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=501371,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=DKM08_RS02555;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 501651 502208 . - . ID=gene-DKM08_RS02560;Name=DKM08_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02560;old_locus_tag=DKM08_02550 NZ_QFYX01000001.1 Protein Homology CDS 501651 502208 . - 0 ID=cds-WP_003403820.1;Parent=gene-DKM08_RS02560;Dbxref=GenBank:WP_003403820.1;Name=WP_003403820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215257.1;locus_tag=DKM08_RS02560;product=DUF6036 family nucleotidyltransferase;protein_id=WP_003403820.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 502205 502711 . - . ID=gene-DKM08_RS02565;Name=DKM08_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02565;old_locus_tag=DKM08_02555 NZ_QFYX01000001.1 Protein Homology CDS 502205 502711 . - 0 ID=cds-WP_003403827.1;Parent=gene-DKM08_RS02565;Dbxref=GenBank:WP_003403827.1;Name=WP_003403827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215258.1;locus_tag=DKM08_RS02565;product=helix-turn-helix domain-containing protein;protein_id=WP_003403827.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 502824 502967 . - . ID=gene-DKM08_RS02570;Name=DKM08_RS02570;end_range=502967,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02570;old_locus_tag=DKM08_02560;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 502824 502967 . - 0 ID=cds-DKM08_RS02570;Parent=gene-DKM08_RS02570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=502967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392970.1;locus_tag=DKM08_RS02570;partial=true;product=3-hydroxyisobutyryl-CoA hydrolase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 502979 503238 . + . ID=gene-DKM08_RS21470;Name=DKM08_RS21470;end_range=503238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21470;partial=true;pseudo=true;start_range=.,502979 NZ_QFYX01000001.1 Protein Homology CDS 502979 503238 . + 0 ID=cds-DKM08_RS21470;Parent=gene-DKM08_RS21470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=503238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924697.1;locus_tag=DKM08_RS21470;partial=true;product=Zn-binding domain-containing protein;pseudo=true;start_range=.,502979;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 503466 505859 . + . ID=gene-DKM08_RS02580;Name=DKM08_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02580;old_locus_tag=DKM08_02570 NZ_QFYX01000001.1 Protein Homology CDS 503466 505859 . + 0 ID=cds-WP_011799125.1;Parent=gene-DKM08_RS02580;Dbxref=GenBank:WP_011799125.1;Name=WP_011799125.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287788.1;locus_tag=DKM08_RS02580;product=PE family protein;protein_id=WP_011799125.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 506258 508987 . + . ID=gene-DKM08_RS02590;Name=DKM08_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02590;old_locus_tag=DKM08_02580 NZ_QFYX01000001.1 Protein Homology CDS 506258 508987 . + 0 ID=cds-WP_147020876.1;Parent=gene-DKM08_RS02590;Dbxref=GenBank:WP_147020876.1;Name=WP_147020876.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799126.1;locus_tag=DKM08_RS02590;product=PE family protein;protein_id=WP_147020876.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 509078 509335 . + . ID=gene-DKM08_RS02595;Name=DKM08_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02595;old_locus_tag=DKM08_02585 NZ_QFYX01000001.1 Protein Homology CDS 509078 509335 . + 0 ID=cds-WP_003403834.1;Parent=gene-DKM08_RS02595;Dbxref=GenBank:WP_003403834.1;Name=WP_003403834.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=DKM08_RS02595;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403834.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 509359 509787 . + . ID=gene-DKM08_RS02600;Name=DKM08_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02600;old_locus_tag=DKM08_02590 NZ_QFYX01000001.1 Protein Homology CDS 509359 509787 . + 0 ID=cds-WP_003403837.1;Parent=gene-DKM08_RS02600;Dbxref=GenBank:WP_003403837.1;Name=WP_003403837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215263.1;locus_tag=DKM08_RS02600;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403837.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 509868 510005 . - . ID=gene-DKM08_RS02605;Name=DKM08_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02605;old_locus_tag=DKM08_02595 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 509868 510005 . - 0 ID=cds-WP_003403839.1;Parent=gene-DKM08_RS02605;Dbxref=GenBank:WP_003403839.1;Name=WP_003403839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS02605;product=hypothetical protein;protein_id=WP_003403839.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 510164 510409 . + . ID=gene-DKM08_RS02610;Name=DKM08_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02610;old_locus_tag=DKM08_02600 NZ_QFYX01000001.1 Protein Homology CDS 510164 510409 . + 0 ID=cds-WP_003403841.1;Parent=gene-DKM08_RS02610;Dbxref=GenBank:WP_003403841.1;Name=WP_003403841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215264.1;locus_tag=DKM08_RS02610;product=hypothetical protein;protein_id=WP_003403841.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 510478 511362 . - . ID=gene-DKM08_RS02615;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=DKM08_RS02615;old_locus_tag=DKM08_02605 NZ_QFYX01000001.1 Protein Homology CDS 510478 511362 . - 0 ID=cds-WP_003403844.1;Parent=gene-DKM08_RS02615;Dbxref=GenBank:WP_003403844.1;Name=WP_003403844.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215265.1;locus_tag=DKM08_RS02615;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_003403844.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 511373 512545 . - . ID=gene-DKM08_RS02620;Name=DKM08_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02620;old_locus_tag=DKM08_02610 NZ_QFYX01000001.1 Protein Homology CDS 511373 512545 . - 0 ID=cds-WP_010950438.1;Parent=gene-DKM08_RS02620;Dbxref=GenBank:WP_010950438.1;Name=WP_010950438.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215266.1;locus_tag=DKM08_RS02620;product=acyl-CoA dehydrogenase family protein;protein_id=WP_010950438.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 512552 514084 . - . ID=gene-DKM08_RS02625;Name=mmsA;gbkey=Gene;gene=mmsA;gene_biotype=protein_coding;locus_tag=DKM08_RS02625;old_locus_tag=DKM08_02615 NZ_QFYX01000001.1 Protein Homology CDS 512552 514084 . - 0 ID=cds-WP_010950439.1;Parent=gene-DKM08_RS02625;Dbxref=GenBank:WP_010950439.1;Name=WP_010950439.1;gbkey=CDS;gene=mmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215267.1;locus_tag=DKM08_RS02625;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_010950439.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 514290 516044 . + . ID=gene-DKM08_RS02630;Name=DKM08_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02630;old_locus_tag=DKM08_02620 NZ_QFYX01000001.1 Protein Homology CDS 514290 516044 . + 0 ID=cds-WP_003403850.1;Parent=gene-DKM08_RS02630;Dbxref=GenBank:WP_003403850.1;Name=WP_003403850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177752.1;locus_tag=DKM08_RS02630;product=phosphoglycerate mutase PE_PGRS11;protein_id=WP_003403850.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 516234 518171 . - . ID=gene-DKM08_RS02635;Name=DKM08_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02635;old_locus_tag=DKM08_02625 NZ_QFYX01000001.1 Protein Homology CDS 516234 518171 . - 0 ID=cds-WP_003904469.1;Parent=gene-DKM08_RS02635;Dbxref=GenBank:WP_003904469.1;Name=WP_003904469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177753.1;locus_tag=DKM08_RS02635;product=PPE family protein;protein_id=WP_003904469.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 518500 518658 . - . ID=gene-DKM08_RS02640;Name=DKM08_RS02640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02640;old_locus_tag=DKM08_02630;partial=true;pseudo=true;start_range=.,518500 NZ_QFYX01000001.1 Protein Homology CDS 518500 518658 . - 0 ID=cds-DKM08_RS02640;Parent=gene-DKM08_RS02640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948855.1;locus_tag=DKM08_RS02640;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,518500;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 518773 518844 . - . ID=gene-DKM08_RS02645;Name=DKM08_RS02645;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS02645;old_locus_tag=DKM08_02635 NZ_QFYX01000001.1 tRNAscan-SE tRNA 518773 518844 . - . ID=rna-DKM08_RS02645;Parent=gene-DKM08_RS02645;anticodon=(pos:complement(518810..518812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS02645;product=tRNA-Thr NZ_QFYX01000001.1 tRNAscan-SE exon 518773 518844 . - . ID=exon-DKM08_RS02645-1;Parent=rna-DKM08_RS02645;anticodon=(pos:complement(518810..518812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS02645;product=tRNA-Thr NZ_QFYX01000001.1 RefSeq gene 518872 519597 . - . ID=gene-DKM08_RS02650;Name=DKM08_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02650;old_locus_tag=DKM08_02640 NZ_QFYX01000001.1 Protein Homology CDS 518872 519597 . - 0 ID=cds-WP_003403862.1;Parent=gene-DKM08_RS02650;Dbxref=GenBank:WP_003403862.1;Name=WP_003403862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215270.1;locus_tag=DKM08_RS02650;product=hypothetical protein;protein_id=WP_003403862.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 519739 520482 . + . ID=gene-DKM08_RS02655;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=DKM08_RS02655;old_locus_tag=DKM08_02645 NZ_QFYX01000001.1 Protein Homology CDS 519739 520482 . + 0 ID=cds-WP_003403867.1;Parent=gene-DKM08_RS02655;Dbxref=GenBank:WP_003403867.1;Name=WP_003403867.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215271.1;locus_tag=DKM08_RS02655;product=two-component system response regulator PhoP;protein_id=WP_003403867.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 520527 521984 . + . ID=gene-DKM08_RS02660;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=DKM08_RS02660;old_locus_tag=DKM08_02650 NZ_QFYX01000001.1 Protein Homology CDS 520527 521984 . + 0 ID=cds-WP_003403870.1;Parent=gene-DKM08_RS02660;Dbxref=GenBank:WP_003403870.1;Name=WP_003403870.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215272.1;locus_tag=DKM08_RS02660;product=sensory box histidine kinase PhoR;protein_id=WP_003403870.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 521956 522357 . - . ID=gene-DKM08_RS02665;Name=DKM08_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02665;old_locus_tag=DKM08_02655 NZ_QFYX01000001.1 Protein Homology CDS 521956 522357 . - 0 ID=cds-WP_003403876.1;Parent=gene-DKM08_RS02665;Dbxref=GenBank:WP_003403876.1;Name=WP_003403876.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403876.1;locus_tag=DKM08_RS02665;product=HIT family protein;protein_id=WP_003403876.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 522397 522816 . - . ID=gene-DKM08_RS02670;Name=DKM08_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02670;old_locus_tag=DKM08_02660 NZ_QFYX01000001.1 Protein Homology CDS 522397 522816 . - 0 ID=cds-WP_003403880.1;Parent=gene-DKM08_RS02670;Dbxref=GenBank:WP_003403880.1;Name=WP_003403880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215274.1;locus_tag=DKM08_RS02670;product=ketosteroid isomerase family protein;protein_id=WP_003403880.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 522829 523956 . - . ID=gene-DKM08_RS02675;Name=adhB;gbkey=Gene;gene=adhB;gene_biotype=protein_coding;locus_tag=DKM08_RS02675;old_locus_tag=DKM08_02665 NZ_QFYX01000001.1 Protein Homology CDS 522829 523956 . - 0 ID=cds-WP_003403885.1;Parent=gene-DKM08_RS02675;Dbxref=GenBank:WP_003403885.1;Name=WP_003403885.1;gbkey=CDS;gene=adhB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177754.1;locus_tag=DKM08_RS02675;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003403885.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 524055 524600 . - . ID=gene-DKM08_RS02680;Name=DKM08_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02680;old_locus_tag=DKM08_02670 NZ_QFYX01000001.1 Protein Homology CDS 524055 524600 . - 0 ID=cds-WP_003403887.1;Parent=gene-DKM08_RS02680;Dbxref=GenBank:WP_003403887.1;Name=WP_003403887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215276.1;locus_tag=DKM08_RS02680;product=nuclear transport factor 2 family protein;protein_id=WP_003403887.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 524603 524809 . - . ID=gene-DKM08_RS02685;Name=DKM08_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02685;old_locus_tag=DKM08_02675 NZ_QFYX01000001.1 Protein Homology CDS 524603 524809 . - 0 ID=cds-WP_003403890.1;Parent=gene-DKM08_RS02685;Dbxref=GenBank:WP_003403890.1;Name=WP_003403890.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215277.1;locus_tag=DKM08_RS02685;product=ferredoxin;protein_id=WP_003403890.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 524812 526167 . - . ID=gene-DKM08_RS02690;Name=cyp51;gbkey=Gene;gene=cyp51;gene_biotype=protein_coding;locus_tag=DKM08_RS02690;old_locus_tag=DKM08_02680 NZ_QFYX01000001.1 Protein Homology CDS 524812 526167 . - 0 ID=cds-WP_003898577.1;Parent=gene-DKM08_RS02690;Dbxref=GenBank:WP_003898577.1;Name=WP_003898577.1;gbkey=CDS;gene=cyp51;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215278.1;locus_tag=DKM08_RS02690;product=lanosterol 14-alpha demethylase;protein_id=WP_003898577.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 526167 526994 . - . ID=gene-DKM08_RS02695;Name=DKM08_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02695;old_locus_tag=DKM08_02685 NZ_QFYX01000001.1 Protein Homology CDS 526167 526994 . - 0 ID=cds-WP_003898578.1;Parent=gene-DKM08_RS02695;Dbxref=GenBank:WP_003898578.1;Name=WP_003898578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215279.1;locus_tag=DKM08_RS02695;product=SDR family oxidoreductase;protein_id=WP_003898578.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 526994 528202 . - . ID=gene-DKM08_RS02700;Name=DKM08_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02700;old_locus_tag=DKM08_02690 NZ_QFYX01000001.1 Protein Homology CDS 526994 528202 . - 0 ID=cds-WP_003403911.1;Parent=gene-DKM08_RS02700;Dbxref=GenBank:WP_003403911.1;Name=WP_003403911.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215280.1;locus_tag=DKM08_RS02700;product=cytochrome P450;protein_id=WP_003403911.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 528199 528840 . - . ID=gene-DKM08_RS02705;Name=DKM08_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02705;old_locus_tag=DKM08_02695 NZ_QFYX01000001.1 Protein Homology CDS 528199 528840 . - 0 ID=cds-WP_003403915.1;Parent=gene-DKM08_RS02705;Dbxref=GenBank:WP_003403915.1;Name=WP_003403915.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215281.1;locus_tag=DKM08_RS02705;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403915.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 529042 530511 . + . ID=gene-DKM08_RS02710;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=DKM08_RS02710;old_locus_tag=DKM08_02700 NZ_QFYX01000001.1 Protein Homology CDS 529042 530511 . + 0 ID=cds-WP_003403919.1;Parent=gene-DKM08_RS02710;Dbxref=GenBank:WP_003403919.1;Name=WP_003403919.1;Ontology_term=GO:0016903;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215282.1;locus_tag=DKM08_RS02710;product=aldehyde dehydrogenase;protein_id=WP_003403919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 530542 531288 . + . ID=gene-DKM08_RS02715;Name=DKM08_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02715;old_locus_tag=DKM08_02705 NZ_QFYX01000001.1 Protein Homology CDS 530542 531288 . + 0 ID=cds-WP_010950440.1;Parent=gene-DKM08_RS02715;Dbxref=GenBank:WP_010950440.1;Name=WP_010950440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215283.1;locus_tag=DKM08_RS02715;product=SDR family oxidoreductase;protein_id=WP_010950440.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 531386 532273 . + . ID=gene-DKM08_RS02720;Name=DKM08_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02720;old_locus_tag=DKM08_02710 NZ_QFYX01000001.1 Protein Homology CDS 531386 532273 . + 0 ID=cds-WP_003403924.1;Parent=gene-DKM08_RS02720;Dbxref=GenBank:WP_003403924.1;Name=WP_003403924.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215284.1;locus_tag=DKM08_RS02720;product=NAD(P)-dependent oxidoreductase;protein_id=WP_003403924.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 532270 532704 . + . ID=gene-DKM08_RS02725;Name=DKM08_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02725;old_locus_tag=DKM08_02715 NZ_QFYX01000001.1 Protein Homology CDS 532270 532704 . + 0 ID=cds-WP_003403928.1;Parent=gene-DKM08_RS02725;Dbxref=GenBank:WP_003403928.1;Name=WP_003403928.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215285.1;locus_tag=DKM08_RS02725;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003403928.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 532716 533984 . + . ID=gene-DKM08_RS02730;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=DKM08_RS02730;old_locus_tag=DKM08_02720 NZ_QFYX01000001.1 Protein Homology CDS 532716 533984 . + 0 ID=cds-WP_003898580.1;Parent=gene-DKM08_RS02730;Dbxref=GenBank:WP_003898580.1;Name=WP_003898580.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215286.1;locus_tag=DKM08_RS02730;product=phosphoribosylamine--glycine ligase;protein_id=WP_003898580.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 533981 535564 . - . ID=gene-DKM08_RS02735;Name=ggtA;gbkey=Gene;gene=ggtA;gene_biotype=protein_coding;locus_tag=DKM08_RS02735;old_locus_tag=DKM08_02725 NZ_QFYX01000001.1 Protein Homology CDS 533981 535564 . - 0 ID=cds-WP_003911281.1;Parent=gene-DKM08_RS02735;Dbxref=GenBank:WP_003911281.1;Name=WP_003911281.1;gbkey=CDS;gene=ggtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918129.1;locus_tag=DKM08_RS02735;product=gamma-glutamyltranspeptidase GgtA;protein_id=WP_003911281.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 535570 536481 . - . ID=gene-DKM08_RS02740;Name=DKM08_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02740;old_locus_tag=DKM08_02730 NZ_QFYX01000001.1 Protein Homology CDS 535570 536481 . - 0 ID=cds-WP_011799129.1;Parent=gene-DKM08_RS02740;Dbxref=GenBank:WP_011799129.1;Name=WP_011799129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215288.2;locus_tag=DKM08_RS02740;product=iron-stress inducible esterase;protein_id=WP_011799129.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 536537 537160 . + . ID=gene-DKM08_RS02745;Name=DKM08_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02745;old_locus_tag=DKM08_02735 NZ_QFYX01000001.1 Protein Homology CDS 536537 537160 . + 0 ID=cds-WP_003403945.1;Parent=gene-DKM08_RS02745;Dbxref=GenBank:WP_003403945.1;Name=WP_003403945.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215289.1;locus_tag=DKM08_RS02745;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403945.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 537114 537893 . - . ID=gene-DKM08_RS02750;Name=DKM08_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02750;old_locus_tag=DKM08_02740 NZ_QFYX01000001.1 Protein Homology CDS 537114 537893 . - 0 ID=cds-WP_003403949.1;Parent=gene-DKM08_RS02750;Dbxref=GenBank:WP_003403949.1;Name=WP_003403949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215290.1;locus_tag=DKM08_RS02750;product=DUF429 domain-containing protein;protein_id=WP_003403949.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 538138 539556 . + . ID=gene-DKM08_RS02755;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=DKM08_RS02755;old_locus_tag=DKM08_02745 NZ_QFYX01000001.1 Protein Homology CDS 538138 539556 . + 0 ID=cds-WP_003403952.1;Parent=gene-DKM08_RS02755;Dbxref=GenBank:WP_003403952.1;Name=WP_003403952.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215291.1;locus_tag=DKM08_RS02755;product=adenylosuccinate lyase;protein_id=WP_003403952.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 539561 540805 . + . ID=gene-DKM08_RS02760;Name=DKM08_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02760;old_locus_tag=DKM08_02750 NZ_QFYX01000001.1 Protein Homology CDS 539561 540805 . + 0 ID=cds-WP_003898584.1;Parent=gene-DKM08_RS02760;Dbxref=GenBank:WP_003898584.1;Name=WP_003898584.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215292.1;locus_tag=DKM08_RS02760;product=cytochrome P450;protein_id=WP_003898584.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 540802 541422 . - . ID=gene-DKM08_RS02765;Name=DKM08_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02765;old_locus_tag=DKM08_02755 NZ_QFYX01000001.1 Protein Homology CDS 540802 541422 . - 0 ID=cds-WP_003403957.1;Parent=gene-DKM08_RS02765;Dbxref=GenBank:WP_003403957.1;Name=WP_003403957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215293.1;locus_tag=DKM08_RS02765;product=hypothetical protein;protein_id=WP_003403957.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 541473 542366 . + . ID=gene-DKM08_RS02770;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=DKM08_RS02770;old_locus_tag=DKM08_02760 NZ_QFYX01000001.1 Protein Homology CDS 541473 542366 . + 0 ID=cds-WP_003403962.1;Parent=gene-DKM08_RS02770;Dbxref=GenBank:WP_003403962.1;Name=WP_003403962.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215294.1;locus_tag=DKM08_RS02770;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_003403962.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 542363 544522 . + . ID=gene-DKM08_RS02775;Name=DKM08_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02775;old_locus_tag=DKM08_02765 NZ_QFYX01000001.1 Protein Homology CDS 542363 544522 . + 0 ID=cds-WP_003898586.1;Parent=gene-DKM08_RS02775;Dbxref=GenBank:WP_003898586.1;Name=WP_003898586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915458.1;locus_tag=DKM08_RS02775;product=S9 family peptidase;protein_id=WP_003898586.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 544568 544702 . + . ID=gene-DKM08_RS22385;Name=DKM08_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22385 NZ_QFYX01000001.1 Protein Homology CDS 544568 544702 . + 0 ID=cds-WP_003403972.1;Parent=gene-DKM08_RS22385;Dbxref=GenBank:WP_003403972.1;Name=WP_003403972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403972.1;locus_tag=DKM08_RS22385;product=hypothetical protein;protein_id=WP_003403972.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 544821 544961 . + . ID=gene-DKM08_RS02780;Name=DKM08_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02780;old_locus_tag=DKM08_02770 NZ_QFYX01000001.1 Protein Homology CDS 544821 544961 . + 0 ID=cds-WP_003403974.1;Parent=gene-DKM08_RS02780;Dbxref=GenBank:WP_003403974.1;Name=WP_003403974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403974.1;locus_tag=DKM08_RS02780;product=WHG domain-containing protein;protein_id=WP_003403974.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 544950 546572 . - . ID=gene-DKM08_RS02785;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=DKM08_RS02785;old_locus_tag=DKM08_02775 NZ_QFYX01000001.1 Protein Homology CDS 544950 546572 . - 0 ID=cds-WP_003403977.1;Parent=gene-DKM08_RS02785;Dbxref=GenBank:WP_003403977.1;Name=WP_003403977.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215297.1;locus_tag=DKM08_RS02785;product=MFS transporter;protein_id=WP_003403977.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 546752 547456 . + . ID=gene-DKM08_RS02790;Name=DKM08_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02790;old_locus_tag=DKM08_02780 NZ_QFYX01000001.1 Protein Homology CDS 546752 547456 . + 0 ID=cds-WP_003403980.1;Parent=gene-DKM08_RS02790;Dbxref=GenBank:WP_003403980.1;Name=WP_003403980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403980.1;locus_tag=DKM08_RS02790;product=DUF2334 domain-containing protein;protein_id=WP_003403980.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 547472 549171 . + . ID=gene-DKM08_RS02795;Name=DKM08_RS02795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02795;old_locus_tag=DKM08_02785;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 547472 549171 . + 0 ID=cds-DKM08_RS02795;Parent=gene-DKM08_RS02795;Note=frameshifted;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215299.1;locus_tag=DKM08_RS02795;product=FAD-binding dehydrogenase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 549206 549844 . - . ID=gene-DKM08_RS02800;Name=DKM08_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02800;old_locus_tag=DKM08_02790 NZ_QFYX01000001.1 Protein Homology CDS 549206 549844 . - 0 ID=cds-WP_003403989.1;Parent=gene-DKM08_RS02800;Dbxref=GenBank:WP_003403989.1;Name=WP_003403989.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215300.2;locus_tag=DKM08_RS02800;product=MBL fold metallo-hydrolase;protein_id=WP_003403989.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 549758 550549 . + . ID=gene-DKM08_RS02805;Name=DKM08_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02805;old_locus_tag=DKM08_02795 NZ_QFYX01000001.1 Protein Homology CDS 549758 550549 . + 0 ID=cds-WP_021036368.1;Parent=gene-DKM08_RS02805;Dbxref=GenBank:WP_021036368.1;Name=WP_021036368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584682.1;locus_tag=DKM08_RS02805;product=hypothetical protein;protein_id=WP_021036368.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 550655 550894 . + . ID=gene-DKM08_RS02810;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=DKM08_RS02810;old_locus_tag=DKM08_02800 NZ_QFYX01000001.1 Protein Homology CDS 550655 550894 . + 0 ID=cds-WP_003403993.1;Parent=gene-DKM08_RS02810;Dbxref=GenBank:WP_003403993.1;Name=WP_003403993.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177755.1;locus_tag=DKM08_RS02810;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_003403993.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 550891 551565 . + . ID=gene-DKM08_RS02815;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=DKM08_RS02815;old_locus_tag=DKM08_02805 NZ_QFYX01000001.1 Protein Homology CDS 550891 551565 . + 0 ID=cds-WP_003403995.1;Parent=gene-DKM08_RS02815;Dbxref=GenBank:WP_003403995.1;Name=WP_003403995.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215303.1;locus_tag=DKM08_RS02815;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_003403995.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 551582 552055 . - . ID=gene-DKM08_RS02820;Name=DKM08_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02820;old_locus_tag=DKM08_02810 NZ_QFYX01000001.1 Protein Homology CDS 551582 552055 . - 0 ID=cds-WP_014584683.1;Parent=gene-DKM08_RS02820;Dbxref=GenBank:WP_014584683.1;Name=WP_014584683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584683.1;locus_tag=DKM08_RS02820;product=hypothetical protein;protein_id=WP_014584683.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 552203 552931 . - . ID=gene-DKM08_RS02825;Name=DKM08_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02825;old_locus_tag=DKM08_02815 NZ_QFYX01000001.1 Protein Homology CDS 552203 552931 . - 0 ID=cds-WP_003404002.1;Parent=gene-DKM08_RS02825;Dbxref=GenBank:WP_003404002.1;Name=WP_003404002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215305.1;locus_tag=DKM08_RS02825;product=transglutaminase-like domain-containing protein;protein_id=WP_003404002.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 552928 553971 . - . ID=gene-DKM08_RS02830;Name=DKM08_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02830;old_locus_tag=DKM08_02820 NZ_QFYX01000001.1 Protein Homology CDS 552928 553971 . - 0 ID=cds-WP_003404004.1;Parent=gene-DKM08_RS02830;Dbxref=GenBank:WP_003404004.1;Name=WP_003404004.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215306.1;locus_tag=DKM08_RS02830;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003404004.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 553968 554777 . - . ID=gene-DKM08_RS02835;Name=DKM08_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02835;old_locus_tag=DKM08_02825 NZ_QFYX01000001.1 Protein Homology CDS 553968 554777 . - 0 ID=cds-WP_003404007.1;Parent=gene-DKM08_RS02835;Dbxref=GenBank:WP_003404007.1;Name=WP_003404007.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215307.1;locus_tag=DKM08_RS02835;product=GntR family transcriptional regulator;protein_id=WP_003404007.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 554850 555155 . + . ID=gene-DKM08_RS02840;Name=DKM08_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02840;old_locus_tag=DKM08_02830 NZ_QFYX01000001.1 Protein Homology CDS 554850 555155 . + 0 ID=cds-WP_003404010.1;Parent=gene-DKM08_RS02840;Dbxref=GenBank:WP_003404010.1;Name=WP_003404010.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215308.1;locus_tag=DKM08_RS02840;product=putative quinol monooxygenase;protein_id=WP_003404010.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 555268 556766 . - . ID=gene-DKM08_RS21475;Name=DKM08_RS21475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21475;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 555268 556766 . - 0 ID=cds-DKM08_RS21475;Parent=gene-DKM08_RS21475;Note=frameshifted;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177756.1;locus_tag=DKM08_RS21475;product=dihydrolipoyl dehydrogenase family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 557159 558232 . + . ID=gene-DKM08_RS02855;Name=DKM08_RS02855;end_range=558232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS02855;old_locus_tag=DKM08_02845;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 557159 558232 . + 0 ID=cds-DKM08_RS02855;Parent=gene-DKM08_RS02855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=558232,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=DKM08_RS02855;partial=true;product=IS110-like element IS1547 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 558243 559040 . - . ID=gene-DKM08_RS02860;Name=DKM08_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02860;old_locus_tag=DKM08_02850 NZ_QFYX01000001.1 Protein Homology CDS 558243 559040 . - 0 ID=cds-WP_003404092.1;Parent=gene-DKM08_RS02860;Dbxref=GenBank:WP_003404092.1;Name=WP_003404092.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215313.1;locus_tag=DKM08_RS02860;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_003404092.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 559037 560044 . - . ID=gene-DKM08_RS02865;Name=DKM08_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02865;old_locus_tag=DKM08_02855 NZ_QFYX01000001.1 Protein Homology CDS 559037 560044 . - 0 ID=cds-WP_003404098.1;Parent=gene-DKM08_RS02865;Dbxref=GenBank:WP_003404098.1;Name=WP_003404098.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215314.1;locus_tag=DKM08_RS02865;product=Dyp-type peroxidase;protein_id=WP_003404098.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 560089 561390 . + . ID=gene-DKM08_RS02870;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=DKM08_RS02870;old_locus_tag=DKM08_02860 NZ_QFYX01000001.1 Protein Homology CDS 560089 561390 . + 0 ID=cds-WP_003404103.1;Parent=gene-DKM08_RS02870;Dbxref=GenBank:WP_003404103.1;Name=WP_003404103.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;gene=pepC;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215315.1;locus_tag=DKM08_RS02870;product=M18 family aminopeptidase;protein_id=WP_003404103.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 561402 561749 . + . ID=gene-DKM08_RS02875;Name=DKM08_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02875;old_locus_tag=DKM08_02865 NZ_QFYX01000001.1 Protein Homology CDS 561402 561749 . + 0 ID=cds-WP_003898592.1;Parent=gene-DKM08_RS02875;Dbxref=GenBank:WP_003898592.1;Name=WP_003898592.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215316.1;locus_tag=DKM08_RS02875;product=VOC family protein;protein_id=WP_003898592.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 561743 562399 . - . ID=gene-DKM08_RS02880;Name=DKM08_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02880;old_locus_tag=DKM08_02870 NZ_QFYX01000001.1 Protein Homology CDS 561743 562399 . - 0 ID=cds-WP_003404111.1;Parent=gene-DKM08_RS02880;Dbxref=GenBank:WP_003404111.1;Name=WP_003404111.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215317.1;locus_tag=DKM08_RS02880;product=acetyl-/succinyl-CoA transferase;protein_id=WP_003404111.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 562591 564855 . + . ID=gene-DKM08_RS02885;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=DKM08_RS02885;old_locus_tag=DKM08_02875 NZ_QFYX01000001.1 Protein Homology CDS 562591 564855 . + 0 ID=cds-WP_003404114.1;Parent=gene-DKM08_RS02885;Dbxref=GenBank:WP_003404114.1;Name=WP_003404114.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215318.1;locus_tag=DKM08_RS02885;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_003404114.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 564852 565481 . + . ID=gene-DKM08_RS02890;Name=DKM08_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02890;old_locus_tag=DKM08_02880 NZ_QFYX01000001.1 Protein Homology CDS 564852 565481 . + 0 ID=cds-WP_003404117.1;Parent=gene-DKM08_RS02890;Dbxref=GenBank:WP_003404117.1;Name=WP_003404117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215319.1;locus_tag=DKM08_RS02890;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003404117.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 565602 566558 . + . ID=gene-DKM08_RS02895;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=DKM08_RS02895;old_locus_tag=DKM08_02885 NZ_QFYX01000001.1 Protein Homology CDS 565602 566558 . + 0 ID=cds-WP_003404120.1;Parent=gene-DKM08_RS02895;Dbxref=GenBank:WP_003404120.1;Name=WP_003404120.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215320.1;locus_tag=DKM08_RS02895;product=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;protein_id=WP_003404120.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 566503 568101 . - . ID=gene-DKM08_RS02900;Name=cpsY;gbkey=Gene;gene=cpsY;gene_biotype=protein_coding;locus_tag=DKM08_RS02900;old_locus_tag=DKM08_02890 NZ_QFYX01000001.1 Protein Homology CDS 566503 568101 . - 0 ID=cds-WP_003898594.1;Parent=gene-DKM08_RS02900;Dbxref=GenBank:WP_003898594.1;Name=WP_003898594.1;gbkey=CDS;gene=cpsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215321.1;locus_tag=DKM08_RS02900;product=stealth family protein;protein_id=WP_003898594.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 568406 568795 . + . ID=gene-DKM08_RS02905;Name=DKM08_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02905;old_locus_tag=DKM08_02895 NZ_QFYX01000001.1 Protein Homology CDS 568406 568795 . + 0 ID=cds-WP_003404127.1;Parent=gene-DKM08_RS02905;Dbxref=GenBank:WP_003404127.1;Name=WP_003404127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215322.1;locus_tag=DKM08_RS02905;product=sterol carrier family protein;protein_id=WP_003404127.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 568936 570465 . + . ID=gene-DKM08_RS02910;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=DKM08_RS02910;old_locus_tag=DKM08_02900 NZ_QFYX01000001.1 Protein Homology CDS 568936 570465 . + 0 ID=cds-WP_003911290.1;Parent=gene-DKM08_RS02910;Dbxref=GenBank:WP_003911290.1;Name=WP_003911290.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911290.1;locus_tag=DKM08_RS02910;product=amidophosphoribosyltransferase;protein_id=WP_003911290.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 570496 571590 . + . ID=gene-DKM08_RS02915;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=DKM08_RS02915;old_locus_tag=DKM08_02905 NZ_QFYX01000001.1 Protein Homology CDS 570496 571590 . + 0 ID=cds-WP_003404132.1;Parent=gene-DKM08_RS02915;Dbxref=GenBank:WP_003404132.1;Name=WP_003404132.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215324.1;locus_tag=DKM08_RS02915;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_003404132.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 571676 571858 . - . ID=gene-DKM08_RS02920;Name=DKM08_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02920;old_locus_tag=DKM08_02910 NZ_QFYX01000001.1 Protein Homology CDS 571676 571858 . - 0 ID=cds-WP_003404135.1;Parent=gene-DKM08_RS02920;Dbxref=GenBank:WP_003404135.1;Name=WP_003404135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777661.1;locus_tag=DKM08_RS02920;product=DUF3073 domain-containing protein;protein_id=WP_003404135.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 572005 573111 . - . ID=gene-DKM08_RS02925;Name=DKM08_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02925;old_locus_tag=DKM08_02915 NZ_QFYX01000001.1 Protein Homology CDS 572005 573111 . - 0 ID=cds-WP_003404137.1;Parent=gene-DKM08_RS02925;Dbxref=GenBank:WP_003404137.1;Name=WP_003404137.1;Ontology_term=GO:0016226,GO:0016740,GO:0005739;gbkey=CDS;go_component=mitochondrion|0005739||IEA;go_function=transferase activity|0016740||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215326.1;locus_tag=DKM08_RS02925;product=YgfZ/GcvT domain-containing protein;protein_id=WP_003404137.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 573194 574063 . + . ID=gene-DKM08_RS02930;Name=DKM08_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02930;old_locus_tag=DKM08_02920 NZ_QFYX01000001.1 Protein Homology CDS 573194 574063 . + 0 ID=cds-WP_003404139.1;Parent=gene-DKM08_RS02930;Dbxref=GenBank:WP_003404139.1;Name=WP_003404139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177757.1;locus_tag=DKM08_RS02930;product=aminodeoxychorismate lyase;protein_id=WP_003404139.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 574109 574789 . - . ID=gene-DKM08_RS02935;Name=DKM08_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02935;old_locus_tag=DKM08_02925 NZ_QFYX01000001.1 Protein Homology CDS 574109 574789 . - 0 ID=cds-WP_003898596.1;Parent=gene-DKM08_RS02935;Dbxref=GenBank:WP_003898596.1;Name=WP_003898596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215328.1;locus_tag=DKM08_RS02935;product=FABP family protein;protein_id=WP_003898596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 574952 575254 . - . ID=gene-DKM08_RS02940;Name=DKM08_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02940;old_locus_tag=DKM08_02930 NZ_QFYX01000001.1 Protein Homology CDS 574952 575254 . - 0 ID=cds-WP_003404278.1;Parent=gene-DKM08_RS02940;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=DKM08_RS02940;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 575256 576089 . - . ID=gene-DKM08_RS02945;Name=DKM08_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02945;old_locus_tag=DKM08_02935 NZ_QFYX01000001.1 Protein Homology CDS 575256 576089 . - 0 ID=cds-WP_003404293.1;Parent=gene-DKM08_RS02945;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=DKM08_RS02945;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 576263 576376 . - . ID=gene-DKM08_RS22620;Name=DKM08_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22620 NZ_QFYX01000001.1 Protein Homology CDS 576263 576376 . - 0 ID=cds-WP_349814712.1;Parent=gene-DKM08_RS22620;Dbxref=GenBank:WP_349814712.1;Name=WP_349814712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042933.1;locus_tag=DKM08_RS22620;product=Ms5788A family Cys-rich leader peptide;protein_id=WP_349814712.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 576382 576804 . - . ID=gene-DKM08_RS02950;Name=thiX;gbkey=Gene;gene=thiX;gene_biotype=protein_coding;locus_tag=DKM08_RS02950;old_locus_tag=DKM08_02940 NZ_QFYX01000001.1 Protein Homology CDS 576382 576804 . - 0 ID=cds-WP_003898598.1;Parent=gene-DKM08_RS02950;Dbxref=GenBank:WP_003898598.1;Name=WP_003898598.1;Ontology_term=GO:0015035;gbkey=CDS;gene=thiX;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215331.1;locus_tag=DKM08_RS02950;product=thioredoxin family protein;protein_id=WP_003898598.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 576801 577613 . - . ID=gene-DKM08_RS02955;Name=lmeA;gbkey=Gene;gene=lmeA;gene_biotype=protein_coding;locus_tag=DKM08_RS02955;old_locus_tag=DKM08_02945 NZ_QFYX01000001.1 Protein Homology CDS 576801 577613 . - 0 ID=cds-WP_003404298.1;Parent=gene-DKM08_RS02955;Dbxref=GenBank:WP_003404298.1;Name=WP_003404298.1;gbkey=CDS;gene=lmeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215332.1;locus_tag=DKM08_RS02955;product=mannan chain length control protein LmeA;protein_id=WP_003404298.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 577743 578510 . + . ID=gene-DKM08_RS02960;Name=DKM08_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02960;old_locus_tag=DKM08_02950 NZ_QFYX01000001.1 Protein Homology CDS 577743 578510 . + 0 ID=cds-WP_003903189.1;Parent=gene-DKM08_RS02960;Dbxref=GenBank:WP_003903189.1;Name=WP_003903189.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215333.1;locus_tag=DKM08_RS02960;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003903189.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 578507 579454 . + . ID=gene-DKM08_RS02965;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=DKM08_RS02965;old_locus_tag=DKM08_02955 NZ_QFYX01000001.1 Protein Homology CDS 578507 579454 . + 0 ID=cds-WP_003404307.1;Parent=gene-DKM08_RS02965;Dbxref=GenBank:WP_003404307.1;Name=WP_003404307.1;Ontology_term=GO:0010125,GO:0035447;gbkey=CDS;gene=mshD;go_function=mycothiol synthase activity|0035447||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215334.1;locus_tag=DKM08_RS02965;product=mycothiol synthase;protein_id=WP_003404307.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 579497 580273 . + . ID=gene-DKM08_RS02975;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=DKM08_RS02975;old_locus_tag=DKM08_02960 NZ_QFYX01000001.1 Protein Homology CDS 579497 580273 . + 0 ID=cds-WP_010950447.1;Parent=gene-DKM08_RS02975;Dbxref=GenBank:WP_010950447.1;Name=WP_010950447.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215335.1;locus_tag=DKM08_RS02975;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_010950447.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 580329 580970 . - . ID=gene-DKM08_RS02980;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=DKM08_RS02980;old_locus_tag=DKM08_02965 NZ_QFYX01000001.1 Protein Homology CDS 580329 580970 . - 0 ID=cds-WP_003404314.1;Parent=gene-DKM08_RS02980;Dbxref=GenBank:WP_003404314.1;Name=WP_003404314.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215336.1;locus_tag=DKM08_RS02980;product=phosphate signaling complex protein PhoU;protein_id=WP_003404314.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 581028 583082 . - . ID=gene-DKM08_RS02985;Name=DKM08_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS02985;old_locus_tag=DKM08_02970 NZ_QFYX01000001.1 Protein Homology CDS 581028 583082 . - 0 ID=cds-WP_099179320.1;Parent=gene-DKM08_RS02985;Dbxref=GenBank:WP_099179320.1;Name=WP_099179320.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215337.1;locus_tag=DKM08_RS02985;product=LCP family protein;protein_id=WP_099179320.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 583248 584417 . - . ID=gene-DKM08_RS02990;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=DKM08_RS02990;old_locus_tag=DKM08_02975 NZ_QFYX01000001.1 Protein Homology CDS 583248 584417 . - 0 ID=cds-WP_010950448.1;Parent=gene-DKM08_RS02990;Dbxref=GenBank:WP_010950448.1;Name=WP_010950448.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215338.1;locus_tag=DKM08_RS02990;product=tRNA dihydrouridine synthase DusB;protein_id=WP_010950448.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 584505 585521 . - . ID=gene-DKM08_RS03000;Name=desA1;gbkey=Gene;gene=desA1;gene_biotype=protein_coding;locus_tag=DKM08_RS03000;old_locus_tag=DKM08_02985 NZ_QFYX01000001.1 Protein Homology CDS 584505 585521 . - 0 ID=cds-WP_003404321.1;Parent=gene-DKM08_RS03000;Dbxref=GenBank:WP_003404321.1;Name=WP_003404321.1;gbkey=CDS;gene=desA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177758.1;locus_tag=DKM08_RS03000;product=acyl-ACP desaturase DesA1;protein_id=WP_003404321.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 585683 586324 . - . ID=gene-DKM08_RS03005;Name=DKM08_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03005;old_locus_tag=DKM08_02990 NZ_QFYX01000001.1 Protein Homology CDS 585683 586324 . - 0 ID=cds-WP_003404326.1;Parent=gene-DKM08_RS03005;Dbxref=GenBank:WP_003404326.1;Name=WP_003404326.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215340.1;locus_tag=DKM08_RS03005;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003404326.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 586405 587460 . + . ID=gene-DKM08_RS03010;Name=DKM08_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03010;old_locus_tag=DKM08_02995 NZ_QFYX01000001.1 Protein Homology CDS 586405 587460 . + 0 ID=cds-WP_011799132.1;Parent=gene-DKM08_RS03010;Dbxref=GenBank:WP_011799132.1;Name=WP_011799132.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215341.1;locus_tag=DKM08_RS03010;product=oxygenase MpaB family protein;protein_id=WP_011799132.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 587512 587904 . - . ID=gene-DKM08_RS03015;Name=kmtR;gbkey=Gene;gene=kmtR;gene_biotype=protein_coding;locus_tag=DKM08_RS03015;old_locus_tag=DKM08_03000 NZ_QFYX01000001.1 Protein Homology CDS 587512 587904 . - 0 ID=cds-WP_003404335.1;Parent=gene-DKM08_RS03015;Dbxref=GenBank:WP_003404335.1;Name=WP_003404335.1;gbkey=CDS;gene=kmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215342.1;locus_tag=DKM08_RS03015;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR;protein_id=WP_003404335.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 587962 588309 . - . ID=gene-DKM08_RS03020;Name=DKM08_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03020;old_locus_tag=DKM08_03005 NZ_QFYX01000001.1 Protein Homology CDS 587962 588309 . - 0 ID=cds-WP_078377808.1;Parent=gene-DKM08_RS03020;Dbxref=GenBank:WP_078377808.1;Name=WP_078377808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012601.6;locus_tag=DKM08_RS03020;product=nucleoside deaminase;protein_id=WP_078377808.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 588336 588636 . + . ID=gene-DKM08_RS03025;Name=DKM08_RS03025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS03025;old_locus_tag=DKM08_03010;partial=true;pseudo=true;start_range=.,588336 NZ_QFYX01000001.1 Protein Homology CDS 588336 588636 . + 0 ID=cds-DKM08_RS03025;Parent=gene-DKM08_RS03025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288650.1;locus_tag=DKM08_RS03025;partial=true;product=zinc ribbon domain-containing protein;pseudo=true;start_range=.,588336;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 588741 589646 . + . ID=gene-DKM08_RS03030;Name=DKM08_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03030;old_locus_tag=DKM08_03015 NZ_QFYX01000001.1 Protein Homology CDS 588741 589646 . + 0 ID=cds-WP_003404349.1;Parent=gene-DKM08_RS03030;Dbxref=GenBank:WP_003404349.1;Name=WP_003404349.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215345.1;locus_tag=DKM08_RS03030;product=SAM-dependent methyltransferase;protein_id=WP_003404349.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 589665 590480 . - . ID=gene-DKM08_RS03035;Name=DKM08_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03035;old_locus_tag=DKM08_03020 NZ_QFYX01000001.1 Protein Homology CDS 589665 590480 . - 0 ID=cds-WP_003404352.1;Parent=gene-DKM08_RS03035;Dbxref=GenBank:WP_003404352.1;Name=WP_003404352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215346.1;locus_tag=DKM08_RS03035;product=TIGR04255 family protein;protein_id=WP_003404352.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 590574 590646 . - . ID=gene-DKM08_RS03040;Name=DKM08_RS03040;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS03040;old_locus_tag=DKM08_03025 NZ_QFYX01000001.1 tRNAscan-SE tRNA 590574 590646 . - . ID=rna-DKM08_RS03040;Parent=gene-DKM08_RS03040;anticodon=(pos:complement(590611..590613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03040;product=tRNA-Lys NZ_QFYX01000001.1 tRNAscan-SE exon 590574 590646 . - . ID=exon-DKM08_RS03040-1;Parent=rna-DKM08_RS03040;anticodon=(pos:complement(590611..590613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03040;product=tRNA-Lys NZ_QFYX01000001.1 RefSeq gene 590770 590843 . + . ID=gene-DKM08_RS03045;Name=DKM08_RS03045;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS03045;old_locus_tag=DKM08_03030 NZ_QFYX01000001.1 tRNAscan-SE tRNA 590770 590843 . + . ID=rna-DKM08_RS03045;Parent=gene-DKM08_RS03045;anticodon=(pos:590805..590807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03045;product=tRNA-Glu NZ_QFYX01000001.1 tRNAscan-SE exon 590770 590843 . + . ID=exon-DKM08_RS03045-1;Parent=rna-DKM08_RS03045;anticodon=(pos:590805..590807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03045;product=tRNA-Glu NZ_QFYX01000001.1 RefSeq gene 590881 590957 . + . ID=gene-DKM08_RS03050;Name=DKM08_RS03050;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS03050;old_locus_tag=DKM08_03035 NZ_QFYX01000001.1 tRNAscan-SE tRNA 590881 590957 . + . ID=rna-DKM08_RS03050;Parent=gene-DKM08_RS03050;anticodon=(pos:590915..590917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03050;product=tRNA-Asp NZ_QFYX01000001.1 tRNAscan-SE exon 590881 590957 . + . ID=exon-DKM08_RS03050-1;Parent=rna-DKM08_RS03050;anticodon=(pos:590915..590917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03050;product=tRNA-Asp NZ_QFYX01000001.1 RefSeq gene 590984 591060 . + . ID=gene-DKM08_RS03055;Name=DKM08_RS03055;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS03055;old_locus_tag=DKM08_03040 NZ_QFYX01000001.1 tRNAscan-SE tRNA 590984 591060 . + . ID=rna-DKM08_RS03055;Parent=gene-DKM08_RS03055;anticodon=(pos:591018..591020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03055;product=tRNA-Phe NZ_QFYX01000001.1 tRNAscan-SE exon 590984 591060 . + . ID=exon-DKM08_RS03055-1;Parent=rna-DKM08_RS03055;anticodon=(pos:591018..591020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03055;product=tRNA-Phe NZ_QFYX01000001.1 RefSeq pseudogene 591722 594453 . + . ID=gene-DKM08_RS22485;Name=DKM08_RS22485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22485;old_locus_tag=DKM08_03050;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 591722 594453 . + 0 ID=cds-DKM08_RS22485;Parent=gene-DKM08_RS22485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799133.1;locus_tag=DKM08_RS22485;product=PE family protein PE_PGRS12%2C long form;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 594472 594651 . + . ID=gene-DKM08_RS22490;Name=DKM08_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22490;old_locus_tag=DKM08_03055 NZ_QFYX01000001.1 Protein Homology CDS 594472 594651 . + 0 ID=cds-WP_003404355.1;Parent=gene-DKM08_RS22490;Dbxref=GenBank:WP_003404355.1;Name=WP_003404355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404355.1;locus_tag=DKM08_RS22490;product=hypothetical protein;protein_id=WP_003404355.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 594680 597328 . - . ID=gene-DKM08_RS03070;Name=DKM08_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03070;old_locus_tag=DKM08_03060 NZ_QFYX01000001.1 Protein Homology CDS 594680 597328 . - 0 ID=cds-WP_147020877.1;Parent=gene-DKM08_RS03070;Dbxref=GenBank:WP_147020877.1;Name=WP_147020877.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177761.1;locus_tag=DKM08_RS03070;product=PE family protein;protein_id=WP_147020877.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 597796 598440 . + . ID=gene-DKM08_RS03075;Name=lpqQ;gbkey=Gene;gene=lpqQ;gene_biotype=protein_coding;locus_tag=DKM08_RS03075;old_locus_tag=DKM08_03065 NZ_QFYX01000001.1 Protein Homology CDS 597796 598440 . + 0 ID=cds-WP_010950452.1;Parent=gene-DKM08_RS03075;Dbxref=GenBank:WP_010950452.1;Name=WP_010950452.1;gbkey=CDS;gene=lpqQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215350.1;locus_tag=DKM08_RS03075;product=sensor domain-containing protein;protein_id=WP_010950452.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 598421 598777 . - . ID=gene-DKM08_RS21930;Name=DKM08_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21930 NZ_QFYX01000001.1 Protein Homology CDS 598421 598777 . - 0 ID=cds-WP_003911324.1;Parent=gene-DKM08_RS21930;Dbxref=GenBank:WP_003911324.1;Name=WP_003911324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911324.1;locus_tag=DKM08_RS21930;product=hypothetical protein;protein_id=WP_003911324.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 599053 599868 . - . ID=gene-DKM08_RS03085;Name=DKM08_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03085;old_locus_tag=DKM08_03075 NZ_QFYX01000001.1 Protein Homology CDS 599053 599868 . - 0 ID=cds-WP_003404365.1;Parent=gene-DKM08_RS03085;Dbxref=GenBank:WP_003404365.1;Name=WP_003404365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629722.1;locus_tag=DKM08_RS03085;product=hypothetical protein;protein_id=WP_003404365.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 599846 600874 . - . ID=gene-DKM08_RS03090;Name=DKM08_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03090;old_locus_tag=DKM08_03080 NZ_QFYX01000001.1 Protein Homology CDS 599846 600874 . - 0 ID=cds-WP_003404368.1;Parent=gene-DKM08_RS03090;Dbxref=GenBank:WP_003404368.1;Name=WP_003404368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215352.1;locus_tag=DKM08_RS03090;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003404368.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 601563 602339 . + . ID=gene-DKM08_RS03105;Name=lpqR;gbkey=Gene;gene=lpqR;gene_biotype=protein_coding;locus_tag=DKM08_RS03105;old_locus_tag=DKM08_03095 NZ_QFYX01000001.1 Protein Homology CDS 601563 602339 . + 0 ID=cds-WP_003404370.1;Parent=gene-DKM08_RS03105;Dbxref=GenBank:WP_003404370.1;Name=WP_003404370.1;gbkey=CDS;gene=lpqR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215353.1;locus_tag=DKM08_RS03105;product=M15 family metallopeptidase;protein_id=WP_003404370.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 602426 603238 . + . ID=gene-DKM08_RS03110;Name=DKM08_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03110;old_locus_tag=DKM08_03100 NZ_QFYX01000001.1 Protein Homology CDS 602426 603238 . + 0 ID=cds-WP_003404373.1;Parent=gene-DKM08_RS03110;Dbxref=GenBank:WP_003404373.1;Name=WP_003404373.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215354.1;locus_tag=DKM08_RS03110;product=class I SAM-dependent methyltransferase;protein_id=WP_003404373.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 603306 604166 . - . ID=gene-DKM08_RS03115;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=DKM08_RS03115;old_locus_tag=DKM08_03105 NZ_QFYX01000001.1 Protein Homology CDS 603306 604166 . - 0 ID=cds-WP_003404376.1;Parent=gene-DKM08_RS03115;Dbxref=GenBank:WP_003404376.1;Name=WP_003404376.1;gbkey=CDS;gene=pip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215355.1;locus_tag=DKM08_RS03115;product=proline-specific peptidase family protein;protein_id=WP_003404376.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 604961 606253 . + . ID=gene-DKM08_RS03130;Name=DKM08_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03130;old_locus_tag=DKM08_03120 NZ_QFYX01000001.1 Protein Homology CDS 604961 606253 . + 0 ID=cds-WP_003404382.1;Parent=gene-DKM08_RS03130;Dbxref=GenBank:WP_003404382.1;Name=WP_003404382.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215357.1;locus_tag=DKM08_RS03130;product=MFS transporter;protein_id=WP_003404382.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 606237 607241 . + . ID=gene-DKM08_RS03135;Name=DKM08_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03135;old_locus_tag=DKM08_03125 NZ_QFYX01000001.1 Protein Homology CDS 606237 607241 . + 0 ID=cds-WP_011799135.1;Parent=gene-DKM08_RS03135;Dbxref=GenBank:WP_011799135.1;Name=WP_011799135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215358.1;locus_tag=DKM08_RS03135;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_011799135.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 607305 607955 . - . ID=gene-DKM08_RS03140;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=DKM08_RS03140;old_locus_tag=DKM08_03130 NZ_QFYX01000001.1 Protein Homology CDS 607305 607955 . - 0 ID=cds-WP_010950456.1;Parent=gene-DKM08_RS03140;Dbxref=GenBank:WP_010950456.1;Name=WP_010950456.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215359.1;locus_tag=DKM08_RS03140;product=two-component system response regulator NarL;protein_id=WP_010950456.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 608096 609316 . + . ID=gene-DKM08_RS03145;Name=DKM08_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03145;old_locus_tag=DKM08_03135 NZ_QFYX01000001.1 Protein Homology CDS 608096 609316 . + 0 ID=cds-WP_015287938.1;Parent=gene-DKM08_RS03145;Dbxref=GenBank:WP_015287938.1;Name=WP_015287938.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287938.1;locus_tag=DKM08_RS03145;product=sensor histidine kinase;protein_id=WP_015287938.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 609529 611043 . - . ID=gene-DKM08_RS03150;Name=mmcO;gbkey=Gene;gene=mmcO;gene_biotype=protein_coding;locus_tag=DKM08_RS03150;old_locus_tag=DKM08_03140 NZ_QFYX01000001.1 Protein Homology CDS 609529 611043 . - 0 ID=cds-WP_003404392.1;Parent=gene-DKM08_RS03150;Dbxref=GenBank:WP_003404392.1;Name=WP_003404392.1;gbkey=CDS;gene=mmcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215361.1;locus_tag=DKM08_RS03150;product=multicopper oxidase MmcO;protein_id=WP_003404392.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 611192 611584 . + . ID=gene-DKM08_RS03155;Name=lpqs;gbkey=Gene;gene=lpqs;gene_biotype=protein_coding;locus_tag=DKM08_RS03155;old_locus_tag=DKM08_03145 NZ_QFYX01000001.1 Protein Homology CDS 611192 611584 . + 0 ID=cds-WP_003404393.1;Parent=gene-DKM08_RS03155;Dbxref=GenBank:WP_003404393.1;Name=WP_003404393.1;gbkey=CDS;gene=lpqs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215362.1;locus_tag=DKM08_RS03155;product=lipoprotein LpqS;protein_id=WP_003404393.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 611787 612905 . + . ID=gene-DKM08_RS03160;Name=cysK2;gbkey=Gene;gene=cysK2;gene_biotype=protein_coding;locus_tag=DKM08_RS03160;old_locus_tag=DKM08_03150 NZ_QFYX01000001.1 Protein Homology CDS 611787 612905 . + 0 ID=cds-WP_003404395.1;Parent=gene-DKM08_RS03160;Dbxref=GenBank:WP_003404395.1;Name=WP_003404395.1;gbkey=CDS;gene=cysK2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177762.1;locus_tag=DKM08_RS03160;product=S-sulfocysteine synthase CysK2;protein_id=WP_003404395.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 612905 614164 . + . ID=gene-DKM08_RS03165;Name=DKM08_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03165;old_locus_tag=DKM08_03155 NZ_QFYX01000001.1 Protein Homology CDS 612905 614164 . + 0 ID=cds-WP_003404402.1;Parent=gene-DKM08_RS03165;Dbxref=GenBank:WP_003404402.1;Name=WP_003404402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215364.1;locus_tag=DKM08_RS03165;product=MDR family MFS transporter;protein_id=WP_003404402.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 614161 614493 . + . ID=gene-DKM08_RS03170;Name=DKM08_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03170;old_locus_tag=DKM08_03160 NZ_QFYX01000001.1 Protein Homology CDS 614161 614493 . + 0 ID=cds-WP_003404404.1;Parent=gene-DKM08_RS03170;Dbxref=GenBank:WP_003404404.1;Name=WP_003404404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404404.1;locus_tag=DKM08_RS03170;product=transposase;protein_id=WP_003404404.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 614490 615317 . - . ID=gene-DKM08_RS03175;Name=DKM08_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03175;old_locus_tag=DKM08_03165 NZ_QFYX01000001.1 Protein Homology CDS 614490 615317 . - 0 ID=cds-WP_003404407.1;Parent=gene-DKM08_RS03175;Dbxref=GenBank:WP_003404407.1;Name=WP_003404407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215366.1;locus_tag=DKM08_RS03175;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003404407.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 615606 616244 . + . ID=gene-DKM08_RS03185;Name=DKM08_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03185;old_locus_tag=DKM08_03175 NZ_QFYX01000001.1 Protein Homology CDS 615606 616244 . + 0 ID=cds-WP_003913008.1;Parent=gene-DKM08_RS03185;Dbxref=GenBank:WP_003913008.1;Name=WP_003913008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215367.2;locus_tag=DKM08_RS03185;product=hypothetical protein;protein_id=WP_003913008.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 616285 617967 . - . ID=gene-DKM08_RS03190;Name=pdc;gbkey=Gene;gene=pdc;gene_biotype=protein_coding;locus_tag=DKM08_RS03190;old_locus_tag=DKM08_03180 NZ_QFYX01000001.1 Protein Homology CDS 616285 617967 . - 0 ID=cds-WP_003900222.1;Parent=gene-DKM08_RS03190;Dbxref=GenBank:WP_003900222.1;Name=WP_003900222.1;gbkey=CDS;gene=pdc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215368.1;locus_tag=DKM08_RS03190;product=alpha-keto-acid decarboxylase;protein_id=WP_003900222.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 618032 618475 . + . ID=gene-DKM08_RS03195;Name=DKM08_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03195;old_locus_tag=DKM08_03185 NZ_QFYX01000001.1 Protein Homology CDS 618032 618475 . + 0 ID=cds-WP_003404412.1;Parent=gene-DKM08_RS03195;Dbxref=GenBank:WP_003404412.1;Name=WP_003404412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215369.1;locus_tag=DKM08_RS03195;product=SRPBCC family protein;protein_id=WP_003404412.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 618481 619560 . + . ID=gene-DKM08_RS03200;Name=far;gbkey=Gene;gene=far;gene_biotype=protein_coding;locus_tag=DKM08_RS03200;old_locus_tag=DKM08_03190 NZ_QFYX01000001.1 Protein Homology CDS 618481 619560 . + 0 ID=cds-WP_003404414.1;Parent=gene-DKM08_RS03200;Dbxref=GenBank:WP_003404414.1;Name=WP_003404414.1;gbkey=CDS;gene=far;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215370.1;locus_tag=DKM08_RS03200;product=fatty-acid-CoA racemase;protein_id=WP_003404414.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 619619 620077 . + . ID=gene-DKM08_RS03205;Name=DKM08_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03205;old_locus_tag=DKM08_03195 NZ_QFYX01000001.1 Protein Homology CDS 619619 620077 . + 0 ID=cds-WP_017351365.1;Parent=gene-DKM08_RS03205;Dbxref=GenBank:WP_017351365.1;Name=WP_017351365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351365.1;locus_tag=DKM08_RS03205;product=SRPBCC family protein;protein_id=WP_017351365.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 620126 620578 . + . ID=gene-DKM08_RS03210;Name=DKM08_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03210;old_locus_tag=DKM08_03200 NZ_QFYX01000001.1 Protein Homology CDS 620126 620578 . + 0 ID=cds-WP_003911328.1;Parent=gene-DKM08_RS03210;Dbxref=GenBank:WP_003911328.1;Name=WP_003911328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287941.1;locus_tag=DKM08_RS03210;product=SRPBCC family protein;protein_id=WP_003911328.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 620575 621768 . - . ID=gene-DKM08_RS03215;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=DKM08_RS03215;old_locus_tag=DKM08_03205 NZ_QFYX01000001.1 Protein Homology CDS 620575 621768 . - 0 ID=cds-WP_003404420.1;Parent=gene-DKM08_RS03215;Dbxref=GenBank:WP_003404420.1;Name=WP_003404420.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215373.1;locus_tag=DKM08_RS03215;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003404420.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 621925 623136 . + . ID=gene-DKM08_RS03220;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=DKM08_RS03220;old_locus_tag=DKM08_03210 NZ_QFYX01000001.1 Protein Homology CDS 621925 623136 . + 0 ID=cds-WP_003404423.1;Parent=gene-DKM08_RS03220;Dbxref=GenBank:WP_003404423.1;Name=WP_003404423.1;Ontology_term=GO:0016747;gbkey=CDS;gene=fadA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215374.1;locus_tag=DKM08_RS03220;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003404423.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 623141 625303 . + . ID=gene-DKM08_RS03225;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=DKM08_RS03225;old_locus_tag=DKM08_03215 NZ_QFYX01000001.1 Protein Homology CDS 623141 625303 . + 0 ID=cds-WP_010950460.1;Parent=gene-DKM08_RS03225;Dbxref=GenBank:WP_010950460.1;Name=WP_010950460.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215375.1;locus_tag=DKM08_RS03225;product=fatty oxidation protein FadB;protein_id=WP_010950460.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 625371 627020 . - . ID=gene-DKM08_RS03230;Name=DKM08_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03230;old_locus_tag=DKM08_03220 NZ_QFYX01000001.1 Protein Homology CDS 625371 627020 . - 0 ID=cds-WP_031657243.1;Parent=gene-DKM08_RS03230;Dbxref=GenBank:WP_031657243.1;Name=WP_031657243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729577.1;locus_tag=DKM08_RS03230;product=DNA repair helicase XPB;protein_id=WP_031657243.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 627034 627128 . - . ID=gene-DKM08_RS22625;Name=DKM08_RS22625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22625;old_locus_tag=DKM08_03225;partial=true;pseudo=true;start_range=.,627034 NZ_QFYX01000001.1 Protein Homology CDS 627034 627128 . - 0 ID=cds-DKM08_RS22625;Parent=gene-DKM08_RS22625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=DKM08_RS22625;partial=true;product=sirohydrochlorin chelatase;pseudo=true;start_range=.,627034;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 627137 629407 . - . ID=gene-DKM08_RS03240;Name=DKM08_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03240;old_locus_tag=DKM08_03230 NZ_QFYX01000001.1 Protein Homology CDS 627137 629407 . - 0 ID=cds-WP_003404512.1;Parent=gene-DKM08_RS03240;Dbxref=GenBank:WP_003404512.1;Name=WP_003404512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215377.1;locus_tag=DKM08_RS03240;product=helicase-associated domain-containing protein;protein_id=WP_003404512.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 629475 629675 . + . ID=gene-DKM08_RS03245;Name=DKM08_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03245;old_locus_tag=DKM08_03235 NZ_QFYX01000001.1 Protein Homology CDS 629475 629675 . + 0 ID=cds-WP_003911329.1;Parent=gene-DKM08_RS03245;Dbxref=GenBank:WP_003911329.1;Name=WP_003911329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215378.2;locus_tag=DKM08_RS03245;product=hypothetical protein;protein_id=WP_003911329.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 629685 630187 . + . ID=gene-DKM08_RS03250;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=DKM08_RS03250;old_locus_tag=DKM08_03240;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 629685 630187 . + 0 ID=cds-DKM08_RS03250;Parent=gene-DKM08_RS03250;Note=frameshifted;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215379.1;locus_tag=DKM08_RS03250;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 630184 630666 . + . ID=gene-DKM08_RS03255;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=DKM08_RS03255;old_locus_tag=DKM08_03245 NZ_QFYX01000001.1 Protein Homology CDS 630184 630666 . + 0 ID=cds-WP_003404549.1;Parent=gene-DKM08_RS03255;Dbxref=GenBank:WP_003404549.1;Name=WP_003404549.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;gene=mog;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215380.1;locus_tag=DKM08_RS03255;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003404549.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 630663 631088 . + . ID=gene-DKM08_RS03260;Name=moaE2;gbkey=Gene;gene=moaE2;gene_biotype=protein_coding;locus_tag=DKM08_RS03260;old_locus_tag=DKM08_03250 NZ_QFYX01000001.1 Protein Homology CDS 630663 631088 . + 0 ID=cds-WP_003404552.1;Parent=gene-DKM08_RS03260;Dbxref=GenBank:WP_003404552.1;Name=WP_003404552.1;gbkey=CDS;gene=moaE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215381.1;locus_tag=DKM08_RS03260;product=molybdopterin synthase subunit MoaE2;protein_id=WP_003404552.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 631106 632305 . - . ID=gene-DKM08_RS03265;Name=rpfA;gbkey=Gene;gene=rpfA;gene_biotype=protein_coding;locus_tag=DKM08_RS03265;old_locus_tag=DKM08_03255 NZ_QFYX01000001.1 Protein Homology CDS 631106 632305 . - 0 ID=cds-WP_031742294.1;Parent=gene-DKM08_RS03265;Dbxref=GenBank:WP_031742294.1;Name=WP_031742294.1;gbkey=CDS;gene=rpfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215382.1;locus_tag=DKM08_RS03265;product=resuscitation-promoting factor protein RpfA;protein_id=WP_031742294.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 632315 632537 . - . ID=id-NZ_QFYX01000001.1:632315..632537;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 632753 633031 . - . ID=gene-DKM08_RS03270;Name=moaD2;gbkey=Gene;gene=moaD2;gene_biotype=protein_coding;locus_tag=DKM08_RS03270;old_locus_tag=DKM08_03260 NZ_QFYX01000001.1 Protein Homology CDS 632753 633031 . - 0 ID=cds-WP_003404559.1;Parent=gene-DKM08_RS03270;Dbxref=GenBank:WP_003404559.1;Name=WP_003404559.1;gbkey=CDS;gene=moaD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215383.1;locus_tag=DKM08_RS03270;product=molybdopterin synthase subunit MoaD2;protein_id=WP_003404559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 633035 634117 . - . ID=gene-DKM08_RS03275;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=DKM08_RS03275;old_locus_tag=DKM08_03265 NZ_QFYX01000001.1 Protein Homology CDS 633035 634117 . - 0 ID=cds-WP_003404564.1;Parent=gene-DKM08_RS03275;Dbxref=GenBank:WP_003404564.1;Name=WP_003404564.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215384.1;locus_tag=DKM08_RS03275;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003404564.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 634114 634503 . - . ID=gene-DKM08_RS03280;Name=DKM08_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03280;old_locus_tag=DKM08_03270 NZ_QFYX01000001.1 Protein Homology CDS 634114 634503 . - 0 ID=cds-WP_003404566.1;Parent=gene-DKM08_RS03280;Dbxref=GenBank:WP_003404566.1;Name=WP_003404566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215385.1;locus_tag=DKM08_RS03280;product=YccF domain-containing protein;protein_id=WP_003404566.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 634668 635075 . + . ID=gene-DKM08_RS03285;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=DKM08_RS03285;old_locus_tag=DKM08_03275 NZ_QFYX01000001.1 Protein Homology CDS 634668 635075 . + 0 ID=cds-WP_003404570.1;Parent=gene-DKM08_RS03285;Dbxref=GenBank:WP_003404570.1;Name=WP_003404570.1;Ontology_term=GO:0003676;gbkey=CDS;gene=cspB;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215386.1;locus_tag=DKM08_RS03285;product=cold-shock protein;protein_id=WP_003404570.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 635194 637020 . - . ID=gene-DKM08_RS03290;Name=DKM08_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03290;old_locus_tag=DKM08_03280 NZ_QFYX01000001.1 Protein Homology CDS 635194 637020 . - 0 ID=cds-WP_010950464.1;Parent=gene-DKM08_RS03290;Dbxref=GenBank:WP_010950464.1;Name=WP_010950464.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938284.1;locus_tag=DKM08_RS03290;product=PE family protein;protein_id=WP_010950464.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 637281 639233 . + . ID=gene-DKM08_RS03300;Name=DKM08_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03300;old_locus_tag=DKM08_03290 NZ_QFYX01000001.1 Protein Homology CDS 637281 639233 . + 0 ID=cds-WP_003898626.1;Parent=gene-DKM08_RS03300;Dbxref=GenBank:WP_003898626.1;Name=WP_003898626.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215388.1;locus_tag=DKM08_RS03300;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898626.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 639322 640482 . - . ID=gene-DKM08_RS03305;Name=DKM08_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03305;old_locus_tag=DKM08_03295 NZ_QFYX01000001.1 Protein Homology CDS 639322 640482 . - 0 ID=cds-WP_003404586.1;Parent=gene-DKM08_RS03305;Dbxref=GenBank:WP_003404586.1;Name=WP_003404586.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215389.1;locus_tag=DKM08_RS03305;product=FIST signal transduction protein;protein_id=WP_003404586.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 640582 641070 . - . ID=gene-DKM08_RS03310;Name=DKM08_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03310;old_locus_tag=DKM08_03300 NZ_QFYX01000001.1 Protein Homology CDS 640582 641070 . - 0 ID=cds-WP_003404591.1;Parent=gene-DKM08_RS03310;Dbxref=GenBank:WP_003404591.1;Name=WP_003404591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215390.1;locus_tag=DKM08_RS03310;product=DUF2771 domain-containing protein;protein_id=WP_003404591.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 641067 642713 . - . ID=gene-DKM08_RS03315;Name=DKM08_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03315;old_locus_tag=DKM08_03305 NZ_QFYX01000001.1 Protein Homology CDS 641067 642713 . - 0 ID=cds-WP_003900225.1;Parent=gene-DKM08_RS03315;Dbxref=GenBank:WP_003900225.1;Name=WP_003900225.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215391.1;locus_tag=DKM08_RS03315;product=MFS transporter;protein_id=WP_003900225.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 642851 643639 . + . ID=gene-DKM08_RS03320;Name=DKM08_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03320;old_locus_tag=DKM08_03310 NZ_QFYX01000001.1 Protein Homology CDS 642851 643639 . + 0 ID=cds-WP_003404596.1;Parent=gene-DKM08_RS03320;Dbxref=GenBank:WP_003404596.1;Name=WP_003404596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215392.1;locus_tag=DKM08_RS03320;product=DUF3027 domain-containing protein;protein_id=WP_003404596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 643648 644976 . - . ID=gene-DKM08_RS03325;Name=DKM08_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03325;old_locus_tag=DKM08_03315 NZ_QFYX01000001.1 Protein Homology CDS 643648 644976 . - 0 ID=cds-WP_003404599.1;Parent=gene-DKM08_RS03325;Dbxref=GenBank:WP_003404599.1;Name=WP_003404599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177764.1;locus_tag=DKM08_RS03325;product=PPE family protein;protein_id=WP_003404599.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 645254 645529 . - . ID=gene-DKM08_RS03330;Name=DKM08_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03330;old_locus_tag=DKM08_03320 NZ_QFYX01000001.1 Protein Homology CDS 645254 645529 . - 0 ID=cds-WP_003404603.1;Parent=gene-DKM08_RS03330;Dbxref=GenBank:WP_003404603.1;Name=WP_003404603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215394.1;locus_tag=DKM08_RS03330;product=DUF2530 domain-containing protein;protein_id=WP_003404603.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 645707 646138 . + . ID=gene-DKM08_RS03335;Name=DKM08_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03335;old_locus_tag=DKM08_03325 NZ_QFYX01000001.1 Protein Homology CDS 645707 646138 . + 0 ID=cds-WP_003404606.1;Parent=gene-DKM08_RS03335;Dbxref=GenBank:WP_003404606.1;Name=WP_003404606.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215395.1;locus_tag=DKM08_RS03335;product=MarR family transcriptional regulator;protein_id=WP_003404606.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 646135 647001 . + . ID=gene-DKM08_RS03340;Name=DKM08_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03340;old_locus_tag=DKM08_03330 NZ_QFYX01000001.1 Protein Homology CDS 646135 647001 . + 0 ID=cds-WP_003404610.1;Parent=gene-DKM08_RS03340;Dbxref=GenBank:WP_003404610.1;Name=WP_003404610.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215396.1;locus_tag=DKM08_RS03340;product=TrmH family RNA methyltransferase;protein_id=WP_003404610.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 646998 647282 . + . ID=gene-DKM08_RS03345;Name=DKM08_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03345;old_locus_tag=DKM08_03335 NZ_QFYX01000001.1 Protein Homology CDS 646998 647282 . + 0 ID=cds-WP_003404614.1;Parent=gene-DKM08_RS03345;Dbxref=GenBank:WP_003404614.1;Name=WP_003404614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215397.1;locus_tag=DKM08_RS03345;product=DUF2537 domain-containing protein;protein_id=WP_003404614.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 647279 648040 . - . ID=gene-DKM08_RS03350;Name=sepH;gbkey=Gene;gene=sepH;gene_biotype=protein_coding;locus_tag=DKM08_RS03350;old_locus_tag=DKM08_03340 NZ_QFYX01000001.1 Protein Homology CDS 647279 648040 . - 0 ID=cds-WP_003404617.1;Parent=gene-DKM08_RS03350;Dbxref=GenBank:WP_003404617.1;Name=WP_003404617.1;Ontology_term=GO:0051301;gbkey=CDS;gene=sepH;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215398.1;locus_tag=DKM08_RS03350;product=septation protein SepH;protein_id=WP_003404617.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 648197 649327 . - . ID=gene-DKM08_RS03355;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=DKM08_RS03355;old_locus_tag=DKM08_03345 NZ_QFYX01000001.1 Protein Homology CDS 648197 649327 . - 0 ID=cds-WP_003404623.1;Parent=gene-DKM08_RS03355;Dbxref=GenBank:WP_003404623.1;Name=WP_003404623.1;Ontology_term=GO:0006564,GO:0009058,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215399.1;locus_tag=DKM08_RS03355;product=phosphoserine transaminase;protein_id=WP_003404623.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 649535 650557 . + . ID=gene-DKM08_RS03360;Name=DKM08_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03360;old_locus_tag=DKM08_03350 NZ_QFYX01000001.1 Protein Homology CDS 649535 650557 . + 0 ID=cds-WP_003404627.1;Parent=gene-DKM08_RS03360;Dbxref=GenBank:WP_003404627.1;Name=WP_003404627.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215400.1;locus_tag=DKM08_RS03360;product=AurF N-oxygenase family protein;protein_id=WP_003404627.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 650576 652303 . + . ID=gene-DKM08_RS03365;Name=fprB;gbkey=Gene;gene=fprB;gene_biotype=protein_coding;locus_tag=DKM08_RS03365;old_locus_tag=DKM08_03355 NZ_QFYX01000001.1 Protein Homology CDS 650576 652303 . + 0 ID=cds-WP_003404631.1;Parent=gene-DKM08_RS03365;Dbxref=GenBank:WP_003404631.1;Name=WP_003404631.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fprB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215401.1;locus_tag=DKM08_RS03365;product=FAD-dependent oxidoreductase;protein_id=WP_003404631.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 652286 652744 . - . ID=gene-DKM08_RS03370;Name=DKM08_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03370;old_locus_tag=DKM08_03360 NZ_QFYX01000001.1 Protein Homology CDS 652286 652744 . - 0 ID=cds-WP_003404633.1;Parent=gene-DKM08_RS03370;Dbxref=GenBank:WP_003404633.1;Name=WP_003404633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215402.1;locus_tag=DKM08_RS03370;product=VOC family protein;protein_id=WP_003404633.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 654006 655478 . + . ID=gene-DKM08_RS03380;Name=spmT;gbkey=Gene;gene=spmT;gene_biotype=protein_coding;locus_tag=DKM08_RS03380;old_locus_tag=DKM08_03370 NZ_QFYX01000001.1 Protein Homology CDS 654006 655478 . + 0 ID=cds-WP_003901038.1;Parent=gene-DKM08_RS03380;Dbxref=GenBank:WP_003901038.1;Name=WP_003901038.1;gbkey=CDS;gene=spmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215403.1;locus_tag=DKM08_RS03380;product=sphingomyelinase;protein_id=WP_003901038.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 655513 656634 . - . ID=gene-DKM08_RS03385;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=DKM08_RS03385;old_locus_tag=DKM08_03375 NZ_QFYX01000001.1 Protein Homology CDS 655513 656634 . - 0 ID=cds-WP_003898633.1;Parent=gene-DKM08_RS03385;Dbxref=GenBank:WP_003898633.1;Name=WP_003898633.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215404.1;locus_tag=DKM08_RS03385;product=citrate synthase 2;protein_id=WP_003898633.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 656721 659985 . - . ID=gene-DKM08_RS03390;Name=DKM08_RS03390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS03390;old_locus_tag=DKM08_03380;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 656721 659985 . - 0 ID=cds-DKM08_RS03390;Parent=gene-DKM08_RS03390;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292513.1;locus_tag=DKM08_RS03390;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 660626 662113 . + . ID=gene-DKM08_RS03405;Name=DKM08_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03405;old_locus_tag=DKM08_03395 NZ_QFYX01000001.1 Protein Homology CDS 660626 662113 . + 0 ID=cds-WP_003404651.1;Parent=gene-DKM08_RS03405;Dbxref=GenBank:WP_003404651.1;Name=WP_003404651.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215407.1;locus_tag=DKM08_RS03405;product=flavin-containing monooxygenase;protein_id=WP_003404651.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 662091 663068 . - . ID=gene-DKM08_RS03410;Name=DKM08_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03410;old_locus_tag=DKM08_03400 NZ_QFYX01000001.1 Protein Homology CDS 662091 663068 . - 0 ID=cds-WP_003404654.1;Parent=gene-DKM08_RS03410;Dbxref=GenBank:WP_003404654.1;Name=WP_003404654.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215408.1;locus_tag=DKM08_RS03410;product=class I SAM-dependent methyltransferase;protein_id=WP_003404654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 663297 664478 . + . ID=gene-DKM08_RS03415;Name=DKM08_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03415;old_locus_tag=DKM08_03405 NZ_QFYX01000001.1 Protein Homology CDS 663297 664478 . + 0 ID=cds-WP_003404660.1;Parent=gene-DKM08_RS03415;Dbxref=GenBank:WP_003404660.1;Name=WP_003404660.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215409.1;locus_tag=DKM08_RS03415;product=ATP-binding protein;protein_id=WP_003404660.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 664636 666072 . + . ID=gene-DKM08_RS03420;Name=DKM08_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03420;old_locus_tag=DKM08_03410 NZ_QFYX01000001.1 Protein Homology CDS 664636 666072 . + 0 ID=cds-WP_003898635.1;Parent=gene-DKM08_RS03420;Dbxref=GenBank:WP_003898635.1;Name=WP_003898635.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898635.1;locus_tag=DKM08_RS03420;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003898635.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 666245 667540 . + . ID=gene-DKM08_RS03425;Name=DKM08_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03425;old_locus_tag=DKM08_03415 NZ_QFYX01000001.1 Protein Homology CDS 666245 667540 . + 0 ID=cds-WP_003404665.1;Parent=gene-DKM08_RS03425;Dbxref=GenBank:WP_003404665.1;Name=WP_003404665.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215411.1;locus_tag=DKM08_RS03425;product=citrate synthase;protein_id=WP_003404665.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 667581 669188 . - . ID=gene-DKM08_RS03430;Name=DKM08_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03430;old_locus_tag=DKM08_03420 NZ_QFYX01000001.1 Protein Homology CDS 667581 669188 . - 0 ID=cds-WP_003900230.1;Parent=gene-DKM08_RS03430;Dbxref=GenBank:WP_003900230.1;Name=WP_003900230.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215412.1;locus_tag=DKM08_RS03430;product=phytoene desaturase family protein;protein_id=WP_003900230.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 669214 669477 . - . ID=gene-DKM08_RS03435;Name=DKM08_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03435;old_locus_tag=DKM08_03425 NZ_QFYX01000001.1 Protein Homology CDS 669214 669477 . - 0 ID=cds-WP_003404673.1;Parent=gene-DKM08_RS03435;Dbxref=GenBank:WP_003404673.1;Name=WP_003404673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215413.1;locus_tag=DKM08_RS03435;product=DUF2630 family protein;protein_id=WP_003404673.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 669585 670565 . + . ID=gene-DKM08_RS03440;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=DKM08_RS03440;old_locus_tag=DKM08_03430 NZ_QFYX01000001.1 Protein Homology CDS 669585 670565 . + 0 ID=cds-WP_003404684.1;Parent=gene-DKM08_RS03440;Dbxref=GenBank:WP_003404684.1;Name=WP_003404684.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215414.1;locus_tag=DKM08_RS03440;product=peptidoglycan-binding protein ArfA;protein_id=WP_003404684.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 670578 670730 . + . ID=gene-DKM08_RS03445;Name=DKM08_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03445;old_locus_tag=DKM08_03435 NZ_QFYX01000001.1 Protein Homology CDS 670578 670730 . + 0 ID=cds-WP_003404687.1;Parent=gene-DKM08_RS03445;Dbxref=GenBank:WP_003404687.1;Name=WP_003404687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215415.1;locus_tag=DKM08_RS03445;product=hypothetical protein;protein_id=WP_003404687.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 670730 671257 . + . ID=gene-DKM08_RS03450;Name=DKM08_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03450;old_locus_tag=DKM08_03440 NZ_QFYX01000001.1 Protein Homology CDS 670730 671257 . + 0 ID=cds-WP_003404688.1;Parent=gene-DKM08_RS03450;Dbxref=GenBank:WP_003404688.1;Name=WP_003404688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215416.1;locus_tag=DKM08_RS03450;product=membrane protein;protein_id=WP_003404688.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 671274 672614 . - . ID=gene-DKM08_RS03455;Name=prrB;gbkey=Gene;gene=prrB;gene_biotype=protein_coding;locus_tag=DKM08_RS03455;old_locus_tag=DKM08_03445 NZ_QFYX01000001.1 Protein Homology CDS 671274 672614 . - 0 ID=cds-WP_003404689.1;Parent=gene-DKM08_RS03455;Dbxref=GenBank:WP_003404689.1;Name=WP_003404689.1;gbkey=CDS;gene=prrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215417.1;locus_tag=DKM08_RS03455;product=two-component system sensor histidine kinase PrrB;protein_id=WP_003404689.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 672625 673335 . - . ID=gene-DKM08_RS03460;Name=prrA;gbkey=Gene;gene=prrA;gene_biotype=protein_coding;locus_tag=DKM08_RS03460;old_locus_tag=DKM08_03450 NZ_QFYX01000001.1 Protein Homology CDS 672625 673335 . - 0 ID=cds-WP_003404690.1;Parent=gene-DKM08_RS03460;Dbxref=GenBank:WP_003404690.1;Name=WP_003404690.1;gbkey=CDS;gene=prrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215418.1;locus_tag=DKM08_RS03460;product=two-component system response regulator PrrA;protein_id=WP_003404690.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 673466 674953 . - . ID=gene-DKM08_RS03465;Name=DKM08_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03465;old_locus_tag=DKM08_03455 NZ_QFYX01000001.1 Protein Homology CDS 673466 674953 . - 0 ID=cds-WP_003404691.1;Parent=gene-DKM08_RS03465;Dbxref=GenBank:WP_003404691.1;Name=WP_003404691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215419.1;locus_tag=DKM08_RS03465;product=carboxyl transferase domain-containing protein;protein_id=WP_003404691.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 674980 675711 . + . ID=gene-DKM08_RS03470;Name=DKM08_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03470;old_locus_tag=DKM08_03460 NZ_QFYX01000001.1 Protein Homology CDS 674980 675711 . + 0 ID=cds-WP_003404702.1;Parent=gene-DKM08_RS03470;Dbxref=GenBank:WP_003404702.1;Name=WP_003404702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215420.1;locus_tag=DKM08_RS03470;product=enoyl-CoA hydratase;protein_id=WP_003404702.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 675717 676835 . + . ID=gene-DKM08_RS03475;Name=DKM08_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03475;old_locus_tag=DKM08_03465 NZ_QFYX01000001.1 Protein Homology CDS 675717 676835 . + 0 ID=cds-WP_003404705.1;Parent=gene-DKM08_RS03475;Dbxref=GenBank:WP_003404705.1;Name=WP_003404705.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215421.1;locus_tag=DKM08_RS03475;product=MBL fold metallo-hydrolase;protein_id=WP_003404705.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 676928 678508 . + . ID=gene-DKM08_RS03480;Name=DKM08_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03480;old_locus_tag=DKM08_03470 NZ_QFYX01000001.1 Protein Homology CDS 676928 678508 . + 0 ID=cds-WP_011799139.1;Parent=gene-DKM08_RS03480;Dbxref=GenBank:WP_011799139.1;Name=WP_011799139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975161.1;locus_tag=DKM08_RS03480;product=serine hydrolase;protein_id=WP_011799139.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 678505 680898 . + . ID=gene-DKM08_RS03485;Name=ctpE;gbkey=Gene;gene=ctpE;gene_biotype=protein_coding;locus_tag=DKM08_RS03485;old_locus_tag=DKM08_03475 NZ_QFYX01000001.1 Protein Homology CDS 678505 680898 . + 0 ID=cds-WP_003898639.1;Parent=gene-DKM08_RS03485;Dbxref=GenBank:WP_003898639.1;Name=WP_003898639.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpE;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215423.1;locus_tag=DKM08_RS03485;product=cation-translocating P-type ATPase;protein_id=WP_003898639.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 681171 681329 . + . ID=gene-DKM08_RS21485;Name=DKM08_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21485 NZ_QFYX01000001.1 Protein Homology CDS 681171 681329 . + 0 ID=cds-WP_003404720.1;Parent=gene-DKM08_RS21485;Dbxref=GenBank:WP_003404720.1;Name=WP_003404720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404720.1;locus_tag=DKM08_RS21485;product=hypothetical protein;protein_id=WP_003404720.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 681455 681634 . + . ID=gene-DKM08_RS03490;Name=DKM08_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03490;old_locus_tag=DKM08_03480 NZ_QFYX01000001.1 Protein Homology CDS 681455 681634 . + 0 ID=cds-WP_003404724.1;Parent=gene-DKM08_RS03490;Dbxref=GenBank:WP_003404724.1;Name=WP_003404724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215424.1;locus_tag=DKM08_RS03490;product=antitoxin;protein_id=WP_003404724.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 681640 682074 . + . ID=gene-DKM08_RS03495;Name=DKM08_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03495;old_locus_tag=DKM08_03485 NZ_QFYX01000001.1 Protein Homology CDS 681640 682074 . + 0 ID=cds-WP_003404726.1;Parent=gene-DKM08_RS03495;Dbxref=GenBank:WP_003404726.1;Name=WP_003404726.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215425.1;locus_tag=DKM08_RS03495;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003404726.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 682172 682945 . + . ID=gene-DKM08_RS03500;Name=DKM08_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03500;old_locus_tag=DKM08_03490 NZ_QFYX01000001.1 Protein Homology CDS 682172 682945 . + 0 ID=cds-WP_003404735.1;Parent=gene-DKM08_RS03500;Dbxref=GenBank:WP_003404735.1;Name=WP_003404735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215426.1;locus_tag=DKM08_RS03500;product=VOC family protein;protein_id=WP_003404735.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 683010 683459 . + . ID=gene-DKM08_RS03505;Name=DKM08_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03505;old_locus_tag=DKM08_03495 NZ_QFYX01000001.1 Protein Homology CDS 683010 683459 . + 0 ID=cds-WP_003404738.1;Parent=gene-DKM08_RS03505;Dbxref=GenBank:WP_003404738.1;Name=WP_003404738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215427.1;locus_tag=DKM08_RS03505;product=hypothetical protein;protein_id=WP_003404738.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 683594 683824 . - . ID=gene-DKM08_RS03510;Name=DKM08_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03510;old_locus_tag=DKM08_03500 NZ_QFYX01000001.1 Protein Homology CDS 683594 683824 . - 0 ID=cds-WP_003898642.1;Parent=gene-DKM08_RS03510;Dbxref=GenBank:WP_003898642.1;Name=WP_003898642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404739.1;locus_tag=DKM08_RS03510;product=hypothetical protein;protein_id=WP_003898642.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 683991 685499 . - . ID=gene-DKM08_RS03515;Name=DKM08_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03515;old_locus_tag=DKM08_03505 NZ_QFYX01000001.1 Protein Homology CDS 683991 685499 . - 0 ID=cds-WP_010950467.1;Parent=gene-DKM08_RS03515;Dbxref=GenBank:WP_010950467.1;Name=WP_010950467.1;Ontology_term=GO:0006720,GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid metabolic process|0006720||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215428.1;locus_tag=DKM08_RS03515;product=carotenoid oxygenase family protein;protein_id=WP_010950467.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 685501 686739 . - . ID=gene-DKM08_RS03520;Name=DKM08_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03520;old_locus_tag=DKM08_03510 NZ_QFYX01000001.1 Protein Homology CDS 685501 686739 . - 0 ID=cds-WP_003404744.1;Parent=gene-DKM08_RS03520;Dbxref=GenBank:WP_003404744.1;Name=WP_003404744.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215429.1;locus_tag=DKM08_RS03520;product=acetyl-CoA acetyltransferase;protein_id=WP_003404744.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 686832 688103 . - . ID=gene-DKM08_RS03525;Name=DKM08_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03525;old_locus_tag=DKM08_03515 NZ_QFYX01000001.1 Protein Homology CDS 686832 688103 . - 0 ID=cds-WP_003404747.1;Parent=gene-DKM08_RS03525;Dbxref=GenBank:WP_003404747.1;Name=WP_003404747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177765.1;locus_tag=DKM08_RS03525;product=PPE family protein;protein_id=WP_003404747.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 688118 688417 . - . ID=gene-DKM08_RS03530;Name=DKM08_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03530;old_locus_tag=DKM08_03520 NZ_QFYX01000001.1 Protein Homology CDS 688118 688417 . - 0 ID=cds-WP_003404748.1;Parent=gene-DKM08_RS03530;Dbxref=GenBank:WP_003404748.1;Name=WP_003404748.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177766.1;locus_tag=DKM08_RS03530;product=PE family protein;protein_id=WP_003404748.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 688861 690642 . + . ID=gene-DKM08_RS03535;Name=betP;gbkey=Gene;gene=betP;gene_biotype=protein_coding;locus_tag=DKM08_RS03535;old_locus_tag=DKM08_03525 NZ_QFYX01000001.1 Protein Homology CDS 688861 690642 . + 0 ID=cds-WP_003404749.1;Parent=gene-DKM08_RS03535;Dbxref=GenBank:WP_003404749.1;Name=WP_003404749.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215432.1;locus_tag=DKM08_RS03535;product=BCCT family transporter;protein_id=WP_003404749.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 690639 690896 . + . ID=gene-DKM08_RS03540;Name=DKM08_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03540;old_locus_tag=DKM08_03530 NZ_QFYX01000001.1 Protein Homology CDS 690639 690896 . + 0 ID=cds-WP_003404750.1;Parent=gene-DKM08_RS03540;Dbxref=GenBank:WP_003404750.1;Name=WP_003404750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404750.1;locus_tag=DKM08_RS03540;product=hypothetical protein;protein_id=WP_003404750.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 690985 691461 . + . ID=gene-DKM08_RS03545;Name=DKM08_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03545;old_locus_tag=DKM08_03535 NZ_QFYX01000001.1 Protein Homology CDS 690985 691461 . + 0 ID=cds-WP_003404754.1;Parent=gene-DKM08_RS03545;Dbxref=GenBank:WP_003404754.1;Name=WP_003404754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215433.1;locus_tag=DKM08_RS03545;product=DUF1778 domain-containing protein;protein_id=WP_003404754.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 691458 691958 . + . ID=gene-DKM08_RS03550;Name=DKM08_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03550;old_locus_tag=DKM08_03540 NZ_QFYX01000001.1 Protein Homology CDS 691458 691958 . + 0 ID=cds-WP_003404756.1;Parent=gene-DKM08_RS03550;Dbxref=GenBank:WP_003404756.1;Name=WP_003404756.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215434.1;locus_tag=DKM08_RS03550;product=GNAT family N-acetyltransferase;protein_id=WP_003404756.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 692095 692167 . - . ID=gene-DKM08_RS03555;Name=DKM08_RS03555;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS03555;old_locus_tag=DKM08_03545 NZ_QFYX01000001.1 tRNAscan-SE tRNA 692095 692167 . - . ID=rna-DKM08_RS03555;Parent=gene-DKM08_RS03555;anticodon=(pos:complement(692132..692134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03555;product=tRNA-Arg NZ_QFYX01000001.1 tRNAscan-SE exon 692095 692167 . - . ID=exon-DKM08_RS03555-1;Parent=rna-DKM08_RS03555;anticodon=(pos:complement(692132..692134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03555;product=tRNA-Arg NZ_QFYX01000001.1 RefSeq gene 692271 693590 . - . ID=gene-DKM08_RS03560;Name=DKM08_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03560;old_locus_tag=DKM08_03550 NZ_QFYX01000001.1 Protein Homology CDS 692271 693590 . - 0 ID=cds-WP_010950468.1;Parent=gene-DKM08_RS03560;Dbxref=GenBank:WP_010950468.1;Name=WP_010950468.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215435.1;locus_tag=DKM08_RS03560;product=IS256-like element IS1554 family transposase;protein_id=WP_010950468.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 693878 694459 . + . ID=gene-DKM08_RS03565;Name=DKM08_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03565;old_locus_tag=DKM08_03555 NZ_QFYX01000001.1 Protein Homology CDS 693878 694459 . + 0 ID=cds-WP_003404760.1;Parent=gene-DKM08_RS03565;Dbxref=GenBank:WP_003404760.1;Name=WP_003404760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215436.1;locus_tag=DKM08_RS03565;product=IS607-like element IS1535 family transposase;protein_id=WP_003404760.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 694459 696111 . + . ID=gene-DKM08_RS03570;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=DKM08_RS03570;old_locus_tag=DKM08_03560 NZ_QFYX01000001.1 Protein Homology CDS 694459 696111 . + 0 ID=cds-WP_003404761.1;Parent=gene-DKM08_RS03570;Dbxref=GenBank:WP_003404761.1;Name=WP_003404761.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215437.1;locus_tag=DKM08_RS03570;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003404761.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 696287 697351 . - . ID=gene-DKM08_RS03575;Name=DKM08_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03575;old_locus_tag=DKM08_03565 NZ_QFYX01000001.1 Protein Homology CDS 696287 697351 . - 0 ID=cds-WP_003898648.1;Parent=gene-DKM08_RS03575;Dbxref=GenBank:WP_003898648.1;Name=WP_003898648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215438.1;locus_tag=DKM08_RS03575;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_003898648.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 697352 698635 . - . ID=gene-DKM08_RS03580;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=DKM08_RS03580;old_locus_tag=DKM08_03570 NZ_QFYX01000001.1 Protein Homology CDS 697352 698635 . - 0 ID=cds-WP_072508546.1;Parent=gene-DKM08_RS03580;Dbxref=GenBank:WP_072508546.1;Name=WP_072508546.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177767.1;locus_tag=DKM08_RS03580;product=Nramp family divalent metal transporter;protein_id=WP_072508546.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 698667 699404 . - . ID=gene-DKM08_RS03585;Name=DKM08_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03585;old_locus_tag=DKM08_03575 NZ_QFYX01000001.1 Protein Homology CDS 698667 699404 . - 0 ID=cds-WP_003404764.1;Parent=gene-DKM08_RS03585;Dbxref=GenBank:WP_003404764.1;Name=WP_003404764.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215440.1;locus_tag=DKM08_RS03585;product=flavodoxin family protein;protein_id=WP_003404764.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 699481 700557 . - . ID=gene-DKM08_RS03590;Name=DKM08_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03590;old_locus_tag=DKM08_03580 NZ_QFYX01000001.1 Protein Homology CDS 699481 700557 . - 0 ID=cds-WP_003404767.1;Parent=gene-DKM08_RS03590;Dbxref=GenBank:WP_003404767.1;Name=WP_003404767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215441.1;locus_tag=DKM08_RS03590;product=hypothetical protein;protein_id=WP_003404767.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 700611 701402 . - . ID=gene-DKM08_RS03595;Name=DKM08_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03595;old_locus_tag=DKM08_03585 NZ_QFYX01000001.1 Protein Homology CDS 700611 701402 . - 0 ID=cds-WP_003404769.1;Parent=gene-DKM08_RS03595;Dbxref=GenBank:WP_003404769.1;Name=WP_003404769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215442.1;locus_tag=DKM08_RS03595;product=SDR family oxidoreductase;protein_id=WP_003404769.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 701674 702786 . + . ID=gene-DKM08_RS03600;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=DKM08_RS03600;old_locus_tag=DKM08_03590 NZ_QFYX01000001.1 Protein Homology CDS 701674 702786 . + 0 ID=cds-WP_003404775.1;Parent=gene-DKM08_RS03600;Dbxref=GenBank:WP_003404775.1;Name=WP_003404775.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177768.1;locus_tag=DKM08_RS03600;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003404775.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 702799 703773 . + . ID=gene-DKM08_RS03605;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=DKM08_RS03605;old_locus_tag=DKM08_03595 NZ_QFYX01000001.1 Protein Homology CDS 702799 703773 . + 0 ID=cds-WP_003404779.1;Parent=gene-DKM08_RS03605;Dbxref=GenBank:WP_003404779.1;Name=WP_003404779.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215444.1;locus_tag=DKM08_RS03605;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404779.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 703770 704684 . + . ID=gene-DKM08_RS03610;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=DKM08_RS03610;old_locus_tag=DKM08_03600 NZ_QFYX01000001.1 Protein Homology CDS 703770 704684 . + 0 ID=cds-WP_003898651.1;Parent=gene-DKM08_RS03610;Dbxref=GenBank:WP_003898651.1;Name=WP_003898651.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898651.1;locus_tag=DKM08_RS03610;product=phosphate ABC transporter permease PstA;protein_id=WP_003898651.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 704691 706686 . - . ID=gene-DKM08_RS21490;Name=pknD;gbkey=Gene;gene=pknD;gene_biotype=pseudogene;locus_tag=DKM08_RS21490;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 704691 706686 . - 0 ID=cds-DKM08_RS21490;Parent=gene-DKM08_RS21490;Note=frameshifted;gbkey=CDS;gene=pknD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215446.1;locus_tag=DKM08_RS21490;product=serine/threonine protein kinase PknD;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 706708 707820 . - . ID=gene-DKM08_RS03625;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=DKM08_RS03625;old_locus_tag=DKM08_03615 NZ_QFYX01000001.1 Protein Homology CDS 706708 707820 . - 0 ID=cds-WP_003404784.1;Parent=gene-DKM08_RS03625;Dbxref=GenBank:WP_003404784.1;Name=WP_003404784.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177769.1;locus_tag=DKM08_RS03625;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003404784.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 708036 708867 . + . ID=gene-DKM08_RS03635;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=pseudogene;locus_tag=DKM08_RS03635;old_locus_tag=DKM08_03625;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 708036 708867 . + 0 ID=cds-DKM08_RS03635;Parent=gene-DKM08_RS03635;Note=frameshifted;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215448.1;locus_tag=DKM08_RS03635;product=phosphate ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 708888 710012 . + . ID=gene-DKM08_RS03640;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=DKM08_RS03640;old_locus_tag=DKM08_03630 NZ_QFYX01000001.1 Protein Homology CDS 708888 710012 . + 0 ID=cds-WP_003404786.1;Parent=gene-DKM08_RS03640;Dbxref=GenBank:WP_003404786.1;Name=WP_003404786.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177770.1;locus_tag=DKM08_RS03640;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003404786.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 710072 711088 . + . ID=gene-DKM08_RS03645;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=DKM08_RS03645;old_locus_tag=DKM08_03635 NZ_QFYX01000001.1 Protein Homology CDS 710072 711088 . + 0 ID=cds-WP_003404792.1;Parent=gene-DKM08_RS03645;Dbxref=GenBank:WP_003404792.1;Name=WP_003404792.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177771.1;locus_tag=DKM08_RS03645;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404792.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 711090 711995 . + . ID=gene-DKM08_RS03650;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=DKM08_RS03650;old_locus_tag=DKM08_03640 NZ_QFYX01000001.1 Protein Homology CDS 711090 711995 . + 0 ID=cds-WP_003404794.1;Parent=gene-DKM08_RS03650;Dbxref=GenBank:WP_003404794.1;Name=WP_003404794.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215451.1;locus_tag=DKM08_RS03650;product=phosphate ABC transporter permease PstA;protein_id=WP_003404794.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 711972 712793 . - . ID=gene-DKM08_RS03655;Name=mku;gbkey=Gene;gene=mku;gene_biotype=protein_coding;locus_tag=DKM08_RS03655;old_locus_tag=DKM08_03645 NZ_QFYX01000001.1 Protein Homology CDS 711972 712793 . - 0 ID=cds-WP_031355540.1;Parent=gene-DKM08_RS03655;Dbxref=GenBank:WP_031355540.1;Name=WP_031355540.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;gene=mku;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215452.1;locus_tag=DKM08_RS03655;product=Ku protein;protein_id=WP_031355540.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 712909 715188 . + . ID=gene-DKM08_RS03660;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=DKM08_RS03660;old_locus_tag=DKM08_03650 NZ_QFYX01000001.1 Protein Homology CDS 712909 715188 . + 0 ID=cds-WP_003898655.1;Parent=gene-DKM08_RS03660;Dbxref=GenBank:WP_003898655.1;Name=WP_003898655.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910;gbkey=CDS;gene=ligD;go_function=DNA ligase (ATP) activity|0003910||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215453.1;locus_tag=DKM08_RS03660;product=ATP-dependent DNA ligase;protein_id=WP_003898655.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 715185 717119 . + . ID=gene-DKM08_RS03665;Name=DKM08_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03665;old_locus_tag=DKM08_03655 NZ_QFYX01000001.1 Protein Homology CDS 715185 717119 . + 0 ID=cds-WP_003404801.1;Parent=gene-DKM08_RS03665;Dbxref=GenBank:WP_003404801.1;Name=WP_003404801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215454.1;locus_tag=DKM08_RS03665;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003404801.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 717366 718232 . - . ID=gene-DKM08_RS03670;Name=DKM08_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03670;old_locus_tag=DKM08_03660 NZ_QFYX01000001.1 Protein Homology CDS 717366 718232 . - 0 ID=cds-WP_003404819.1;Parent=gene-DKM08_RS03670;Dbxref=GenBank:WP_003404819.1;Name=WP_003404819.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215455.1;locus_tag=DKM08_RS03670;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003404819.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 718317 719090 . - . ID=gene-DKM08_RS03675;Name=DKM08_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03675;old_locus_tag=DKM08_03665 NZ_QFYX01000001.1 Protein Homology CDS 718317 719090 . - 0 ID=cds-WP_003404823.1;Parent=gene-DKM08_RS03675;Dbxref=GenBank:WP_003404823.1;Name=WP_003404823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215456.1;locus_tag=DKM08_RS03675;product=STAS domain-containing protein;protein_id=WP_003404823.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 719133 719411 . + . ID=gene-DKM08_RS03680;Name=DKM08_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03680;old_locus_tag=DKM08_03670 NZ_QFYX01000001.1 Protein Homology CDS 719133 719411 . + 0 ID=cds-WP_003901948.1;Parent=gene-DKM08_RS03680;Dbxref=GenBank:WP_003901948.1;Name=WP_003901948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215457.1;locus_tag=DKM08_RS03680;product=hypothetical protein;protein_id=WP_003901948.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 719469 720509 . - . ID=gene-DKM08_RS03685;Name=DKM08_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03685;old_locus_tag=DKM08_03675 NZ_QFYX01000001.1 Protein Homology CDS 719469 720509 . - 0 ID=cds-WP_003898656.1;Parent=gene-DKM08_RS03685;Dbxref=GenBank:WP_003898656.1;Name=WP_003898656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215458.1;locus_tag=DKM08_RS03685;product=DUF4873 domain-containing protein;protein_id=WP_003898656.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 720538 721014 . + . ID=gene-DKM08_RS03690;Name=DKM08_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03690;old_locus_tag=DKM08_03680 NZ_QFYX01000001.1 Protein Homology CDS 720538 721014 . + 0 ID=cds-WP_003404828.1;Parent=gene-DKM08_RS03690;Dbxref=GenBank:WP_003404828.1;Name=WP_003404828.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215459.1;locus_tag=DKM08_RS03690;product=zinc finger domain-containing protein;protein_id=WP_003404828.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 721032 721781 . + . ID=gene-DKM08_RS03695;Name=DKM08_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03695;old_locus_tag=DKM08_03685 NZ_QFYX01000001.1 Protein Homology CDS 721032 721781 . + 0 ID=cds-WP_003918158.1;Parent=gene-DKM08_RS03695;Dbxref=GenBank:WP_003918158.1;Name=WP_003918158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777012.1;locus_tag=DKM08_RS03695;product=SDR family oxidoreductase;protein_id=WP_003918158.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 721797 723458 . - . ID=gene-DKM08_RS03700;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=DKM08_RS03700;old_locus_tag=DKM08_03690 NZ_QFYX01000001.1 Protein Homology CDS 721797 723458 . - 0 ID=cds-WP_003404830.1;Parent=gene-DKM08_RS03700;Dbxref=GenBank:WP_003404830.1;Name=WP_003404830.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215461.1;locus_tag=DKM08_RS03700;product=glucose-6-phosphate isomerase;protein_id=WP_003404830.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 724073 724303 . - . ID=gene-DKM08_RS21935;Name=DKM08_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21935;old_locus_tag=DKM08_03700 NZ_QFYX01000001.1 Protein Homology CDS 724073 724303 . - 0 ID=cds-WP_003404833.1;Parent=gene-DKM08_RS21935;Dbxref=GenBank:WP_003404833.1;Name=WP_003404833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404833.1;locus_tag=DKM08_RS21935;product=mycolyltransferase;protein_id=WP_003404833.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 724220 724414 . + . ID=gene-DKM08_RS03715;Name=DKM08_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03715;old_locus_tag=DKM08_03705 NZ_QFYX01000001.1 Protein Homology CDS 724220 724414 . + 0 ID=cds-WP_003404835.1;Parent=gene-DKM08_RS03715;Dbxref=GenBank:WP_003404835.1;Name=WP_003404835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404835.1;locus_tag=DKM08_RS03715;product=hypothetical protein;protein_id=WP_003404835.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 724419 724736 . - . ID=gene-DKM08_RS03720;Name=DKM08_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03720;old_locus_tag=DKM08_03710 NZ_QFYX01000001.1 Protein Homology CDS 724419 724736 . - 0 ID=cds-WP_003404838.1;Parent=gene-DKM08_RS03720;Dbxref=GenBank:WP_003404838.1;Name=WP_003404838.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215463.1;locus_tag=DKM08_RS03720;product=chorismate mutase;protein_id=WP_003404838.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 725033 727348 . + . ID=gene-DKM08_RS03725;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=DKM08_RS03725;old_locus_tag=DKM08_03715 NZ_QFYX01000001.1 Protein Homology CDS 725033 727348 . + 0 ID=cds-WP_003404859.1;Parent=gene-DKM08_RS03725;Dbxref=GenBank:WP_003404859.1;Name=WP_003404859.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177772.1;locus_tag=DKM08_RS03725;product=DNA helicase PcrA;protein_id=WP_003404859.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 727429 728427 . - . ID=gene-DKM08_RS03730;Name=DKM08_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03730;old_locus_tag=DKM08_03720 NZ_QFYX01000001.1 Protein Homology CDS 727429 728427 . - 0 ID=cds-WP_003404862.1;Parent=gene-DKM08_RS03730;Dbxref=GenBank:WP_003404862.1;Name=WP_003404862.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215465.1;locus_tag=DKM08_RS03730;product=M23 family metallopeptidase;protein_id=WP_003404862.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 728737 729900 . + . ID=gene-DKM08_RS03735;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=DKM08_RS03735;old_locus_tag=DKM08_03725 NZ_QFYX01000001.1 Protein Homology CDS 728737 729900 . + 0 ID=cds-WP_003404866.1;Parent=gene-DKM08_RS03735;Dbxref=GenBank:WP_003404866.1;Name=WP_003404866.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215466.1;locus_tag=DKM08_RS03735;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_003404866.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 729922 730824 . + . ID=gene-DKM08_RS03740;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=DKM08_RS03740;old_locus_tag=DKM08_03730 NZ_QFYX01000001.1 Protein Homology CDS 729922 730824 . + 0 ID=cds-WP_003404870.1;Parent=gene-DKM08_RS03740;Dbxref=GenBank:WP_003404870.1;Name=WP_003404870.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007776997.1;locus_tag=DKM08_RS03740;product=succinate--CoA ligase subunit alpha;protein_id=WP_003404870.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 730887 731735 . - . ID=gene-DKM08_RS03745;Name=DKM08_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03745;old_locus_tag=DKM08_03735 NZ_QFYX01000001.1 Protein Homology CDS 730887 731735 . - 0 ID=cds-WP_003404873.1;Parent=gene-DKM08_RS03745;Dbxref=GenBank:WP_003404873.1;Name=WP_003404873.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215468.1;locus_tag=DKM08_RS03745;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003404873.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 731900 732811 . + . ID=gene-DKM08_RS03755;Name=DKM08_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03755;old_locus_tag=DKM08_03745 NZ_QFYX01000001.1 Protein Homology CDS 731900 732811 . + 0 ID=cds-WP_003404875.1;Parent=gene-DKM08_RS03755;Dbxref=GenBank:WP_003404875.1;Name=WP_003404875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215469.1;locus_tag=DKM08_RS03755;product=DUF5336 domain-containing protein;protein_id=WP_003404875.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 732851 734218 . + . ID=gene-DKM08_RS03760;Name=DKM08_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03760;old_locus_tag=DKM08_03750 NZ_QFYX01000001.1 Protein Homology CDS 732851 734218 . + 0 ID=cds-WP_003901049.1;Parent=gene-DKM08_RS03760;Dbxref=GenBank:WP_003901049.1;Name=WP_003901049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215470.1;locus_tag=DKM08_RS03760;product=DUF6350 family protein;protein_id=WP_003901049.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 734334 734981 . + . ID=gene-DKM08_RS03765;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=DKM08_RS03765;old_locus_tag=DKM08_03755 NZ_QFYX01000001.1 Protein Homology CDS 734334 734981 . + 0 ID=cds-WP_023349468.1;Parent=gene-DKM08_RS03765;Dbxref=GenBank:WP_023349468.1;Name=WP_023349468.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215471.1;locus_tag=DKM08_RS03765;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_023349468.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 734978 736549 . + . ID=gene-DKM08_RS03770;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=DKM08_RS03770;old_locus_tag=DKM08_03760 NZ_QFYX01000001.1 Protein Homology CDS 734978 736549 . + 0 ID=cds-WP_003404890.1;Parent=gene-DKM08_RS03770;Dbxref=GenBank:WP_003404890.1;Name=WP_003404890.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215472.1;locus_tag=DKM08_RS03770;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_003404890.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 736656 738035 . + . ID=gene-DKM08_RS03775;Name=DKM08_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03775;old_locus_tag=DKM08_03765 NZ_QFYX01000001.1 Protein Homology CDS 736656 738035 . + 0 ID=cds-WP_003404892.1;Parent=gene-DKM08_RS03775;Dbxref=GenBank:WP_003404892.1;Name=WP_003404892.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215473.1;locus_tag=DKM08_RS03775;product=sigma 54-interacting transcriptional regulator;protein_id=WP_003404892.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 738028 740046 . + . ID=gene-DKM08_RS03780;Name=DKM08_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03780;old_locus_tag=DKM08_03770 NZ_QFYX01000001.1 Protein Homology CDS 738028 740046 . + 0 ID=cds-WP_003404895.1;Parent=gene-DKM08_RS03780;Dbxref=GenBank:WP_003404895.1;Name=WP_003404895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215474.1;locus_tag=DKM08_RS03780;product=vWA domain-containing protein;protein_id=WP_003404895.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 740100 740321 . + . ID=gene-DKM08_RS03785;Name=DKM08_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03785;old_locus_tag=DKM08_03775 NZ_QFYX01000001.1 Protein Homology CDS 740100 740321 . + 0 ID=cds-WP_003404898.1;Parent=gene-DKM08_RS03785;Dbxref=GenBank:WP_003404898.1;Name=WP_003404898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409620.1;locus_tag=DKM08_RS03785;product=antitoxin VapB9;protein_id=WP_003404898.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 740318 740701 . + . ID=gene-DKM08_RS03790;Name=DKM08_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03790;old_locus_tag=DKM08_03780 NZ_QFYX01000001.1 Protein Homology CDS 740318 740701 . + 0 ID=cds-WP_003404903.1;Parent=gene-DKM08_RS03790;Dbxref=GenBank:WP_003404903.1;Name=WP_003404903.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215475.1;locus_tag=DKM08_RS03790;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003404903.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 740847 741194 . + . ID=gene-DKM08_RS03795;Name=DKM08_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03795;old_locus_tag=DKM08_03785 NZ_QFYX01000001.1 Protein Homology CDS 740847 741194 . + 0 ID=cds-WP_003404907.1;Parent=gene-DKM08_RS03795;Dbxref=GenBank:WP_003404907.1;Name=WP_003404907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215476.1;locus_tag=DKM08_RS03795;product=hypothetical protein;protein_id=WP_003404907.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 741213 741887 . - . ID=gene-DKM08_RS03800;Name=lprP;gbkey=Gene;gene=lprP;gene_biotype=protein_coding;locus_tag=DKM08_RS03800;old_locus_tag=DKM08_03790 NZ_QFYX01000001.1 Protein Homology CDS 741213 741887 . - 0 ID=cds-WP_003898662.1;Parent=gene-DKM08_RS03800;Dbxref=GenBank:WP_003898662.1;Name=WP_003898662.1;gbkey=CDS;gene=lprP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215477.1;locus_tag=DKM08_RS03800;product=LppA family lipoprotein;protein_id=WP_003898662.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 741884 742024 . - . ID=gene-DKM08_RS21940;Name=DKM08_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21940 NZ_QFYX01000001.1 Protein Homology CDS 741884 742024 . - 0 ID=cds-WP_003404912.1;Parent=gene-DKM08_RS21940;Dbxref=GenBank:WP_003404912.1;Name=WP_003404912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404912.1;locus_tag=DKM08_RS21940;product=hypothetical protein;protein_id=WP_003404912.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 742070 743023 . - . ID=gene-DKM08_RS21945;Name=DKM08_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21945;old_locus_tag=DKM08_03795 NZ_QFYX01000001.1 Protein Homology CDS 742070 743023 . - 0 ID=cds-WP_003914276.1;Parent=gene-DKM08_RS21945;Dbxref=GenBank:WP_003914276.1;Name=WP_003914276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018018.6;locus_tag=DKM08_RS21945;product=alpha/beta hydrolase family protein;protein_id=WP_003914276.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 743045 743191 . + . ID=gene-DKM08_RS21950;Name=DKM08_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21950 NZ_QFYX01000001.1 Protein Homology CDS 743045 743191 . + 0 ID=cds-WP_009937438.1;Parent=gene-DKM08_RS21950;Dbxref=GenBank:WP_009937438.1;Name=WP_009937438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009937438.1;locus_tag=DKM08_RS21950;product=hypothetical protein;protein_id=WP_009937438.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 743551 743970 . - . ID=gene-DKM08_RS03815;Name=DKM08_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03815;old_locus_tag=DKM08_03805 NZ_QFYX01000001.1 Protein Homology CDS 743551 743970 . - 0 ID=cds-WP_010950472.1;Parent=gene-DKM08_RS03815;Dbxref=GenBank:WP_010950472.1;Name=WP_010950472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215480.1;locus_tag=DKM08_RS03815;product=hypothetical protein;protein_id=WP_010950472.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 744006 744608 . - . ID=gene-DKM08_RS03820;Name=DKM08_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03820;old_locus_tag=DKM08_03810 NZ_QFYX01000001.1 Protein Homology CDS 744006 744608 . - 0 ID=cds-WP_003404923.1;Parent=gene-DKM08_RS03820;Dbxref=GenBank:WP_003404923.1;Name=WP_003404923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215481.2;locus_tag=DKM08_RS03820;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003404923.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 744748 745107 . + . ID=gene-DKM08_RS03825;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=DKM08_RS03825;old_locus_tag=DKM08_03815 NZ_QFYX01000001.1 Protein Homology CDS 744748 745107 . + 0 ID=cds-WP_003404935.1;Parent=gene-DKM08_RS03825;Dbxref=GenBank:WP_003404935.1;Name=WP_003404935.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215482.1;locus_tag=DKM08_RS03825;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_003404935.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 745164 745460 . + . ID=gene-DKM08_RS03830;Name=DKM08_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03830;old_locus_tag=DKM08_03820 NZ_QFYX01000001.1 Protein Homology CDS 745164 745460 . + 0 ID=cds-WP_003404939.1;Parent=gene-DKM08_RS03830;Dbxref=GenBank:WP_003404939.1;Name=WP_003404939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215483.1;locus_tag=DKM08_RS03830;product=DUF1490 family protein;protein_id=WP_003404939.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 745516 747828 . + . ID=gene-DKM08_RS03835;Name=ctpV;gbkey=Gene;gene=ctpV;gene_biotype=protein_coding;locus_tag=DKM08_RS03835;old_locus_tag=DKM08_03825 NZ_QFYX01000001.1 Protein Homology CDS 745516 747828 . + 0 ID=cds-WP_003404941.1;Parent=gene-DKM08_RS03835;Dbxref=GenBank:WP_003404941.1;Name=WP_003404941.1;gbkey=CDS;gene=ctpV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215484.3;locus_tag=DKM08_RS03835;product=copper-translocating P-type ATPase;protein_id=WP_003404941.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 747825 748457 . + . ID=gene-DKM08_RS03840;Name=DKM08_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03840;old_locus_tag=DKM08_03830 NZ_QFYX01000001.1 Protein Homology CDS 747825 748457 . + 0 ID=cds-WP_003898666.1;Parent=gene-DKM08_RS03840;Dbxref=GenBank:WP_003898666.1;Name=WP_003898666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215485.1;locus_tag=DKM08_RS03840;product=DUF5134 domain-containing protein;protein_id=WP_003898666.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 748548 749357 . - . ID=gene-DKM08_RS03845;Name=DKM08_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03845;old_locus_tag=DKM08_03835 NZ_QFYX01000001.1 Protein Homology CDS 748548 749357 . - 0 ID=cds-WP_003404949.1;Parent=gene-DKM08_RS03845;Dbxref=GenBank:WP_003404949.1;Name=WP_003404949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215486.1;locus_tag=DKM08_RS03845;product=enoyl-CoA hydratase family protein;protein_id=WP_003404949.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 749357 750523 . - . ID=gene-DKM08_RS03850;Name=DKM08_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03850;old_locus_tag=DKM08_03840 NZ_QFYX01000001.1 Protein Homology CDS 749357 750523 . - 0 ID=cds-WP_010950473.1;Parent=gene-DKM08_RS03850;Dbxref=GenBank:WP_010950473.1;Name=WP_010950473.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215487.1;locus_tag=DKM08_RS03850;product=acyl-CoA dehydrogenase family protein;protein_id=WP_010950473.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 750520 752523 . - . ID=gene-DKM08_RS03855;Name=DKM08_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03855;old_locus_tag=DKM08_03845 NZ_QFYX01000001.1 Protein Homology CDS 750520 752523 . - 0 ID=cds-WP_010950474.1;Parent=gene-DKM08_RS03855;Dbxref=GenBank:WP_010950474.1;Name=WP_010950474.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215488.1;locus_tag=DKM08_RS03855;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_010950474.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 752529 754118 . - . ID=gene-DKM08_RS03860;Name=DKM08_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03860;old_locus_tag=DKM08_03850 NZ_QFYX01000001.1 Protein Homology CDS 752529 754118 . - 0 ID=cds-WP_003900245.1;Parent=gene-DKM08_RS03860;Dbxref=GenBank:WP_003900245.1;Name=WP_003900245.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215489.1;locus_tag=DKM08_RS03860;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003900245.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 754121 755269 . - . ID=gene-DKM08_RS03865;Name=DKM08_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03865;old_locus_tag=DKM08_03855 NZ_QFYX01000001.1 Protein Homology CDS 754121 755269 . - 0 ID=cds-WP_003898670.1;Parent=gene-DKM08_RS03865;Dbxref=GenBank:WP_003898670.1;Name=WP_003898670.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215490.1;locus_tag=DKM08_RS03865;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898670.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 755266 756948 . - . ID=gene-DKM08_RS03870;Name=DKM08_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03870;old_locus_tag=DKM08_03860 NZ_QFYX01000001.1 Protein Homology CDS 755266 756948 . - 0 ID=cds-WP_003404960.1;Parent=gene-DKM08_RS03870;Dbxref=GenBank:WP_003404960.1;Name=WP_003404960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215491.1;locus_tag=DKM08_RS03870;product=acyclic terpene utilization AtuA family protein;protein_id=WP_003404960.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 757147 759918 . + . ID=gene-DKM08_RS03875;Name=DKM08_RS03875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS03875;old_locus_tag=DKM08_03865;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 757147 759918 . + 0 ID=cds-DKM08_RS03875;Parent=gene-DKM08_RS03875;Note=internal stop;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=DKM08_RS03875;product=PecA family PE domain-processing aspartic protease;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 760135 761142 . - . ID=gene-DKM08_RS22630;Name=DKM08_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22630 NZ_QFYX01000001.1 Protein Homology CDS 760135 761142 . - 0 ID=cds-WP_010950476.1;Parent=gene-DKM08_RS22630;Dbxref=GenBank:WP_010950476.1;Name=WP_010950476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177774.1;locus_tag=DKM08_RS22630;product=PE domain-containing protein;protein_id=WP_010950476.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 761456 761650 . - . ID=gene-DKM08_RS03895;Name=DKM08_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03895;old_locus_tag=DKM08_03885 NZ_QFYX01000001.1 Protein Homology CDS 761456 761650 . - 0 ID=cds-WP_003907536.1;Parent=gene-DKM08_RS03895;Dbxref=GenBank:WP_003907536.1;Name=WP_003907536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215494.2;locus_tag=DKM08_RS03895;product=hypothetical protein;protein_id=WP_003907536.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 761672 761845 . + . ID=gene-DKM08_RS03900;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=DKM08_RS03900;old_locus_tag=DKM08_03890 NZ_QFYX01000001.1 Protein Homology CDS 761672 761845 . + 0 ID=cds-WP_003405053.1;Parent=gene-DKM08_RS03900;Dbxref=GenBank:WP_003405053.1;Name=WP_003405053.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011892777.1;locus_tag=DKM08_RS03900;product=50S ribosomal protein L32;protein_id=WP_003405053.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 761864 763237 . - . ID=gene-DKM08_RS03905;Name=DKM08_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03905;old_locus_tag=DKM08_03895 NZ_QFYX01000001.1 Protein Homology CDS 761864 763237 . - 0 ID=cds-WP_031675073.1;Parent=gene-DKM08_RS03905;Dbxref=GenBank:WP_031675073.1;Name=WP_031675073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177775.1;locus_tag=DKM08_RS03905;product=PE domain-containing protein;protein_id=WP_031675073.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 763608 764294 . + . ID=gene-DKM08_RS03915;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=DKM08_RS03915;old_locus_tag=DKM08_03905 NZ_QFYX01000001.1 Protein Homology CDS 763608 764294 . + 0 ID=cds-WP_014588181.1;Parent=gene-DKM08_RS03915;Dbxref=GenBank:WP_014588181.1;Name=WP_014588181.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215496.2;locus_tag=DKM08_RS03915;product=two-component system response regulator MprA;protein_id=WP_014588181.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 764294 765808 . + . ID=gene-DKM08_RS03920;Name=mprB;gbkey=Gene;gene=mprB;gene_biotype=protein_coding;locus_tag=DKM08_RS03920;old_locus_tag=DKM08_03910 NZ_QFYX01000001.1 Protein Homology CDS 764294 765808 . + 0 ID=cds-WP_003405123.1;Parent=gene-DKM08_RS03920;Dbxref=GenBank:WP_003405123.1;Name=WP_003405123.1;gbkey=CDS;gene=mprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215497.1;locus_tag=DKM08_RS03920;product=two-component system sensor histidine kinase MprB;protein_id=WP_003405123.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 765852 767246 . + . ID=gene-DKM08_RS03925;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=DKM08_RS03925;old_locus_tag=DKM08_03915 NZ_QFYX01000001.1 Protein Homology CDS 765852 767246 . + 0 ID=cds-WP_003901059.1;Parent=gene-DKM08_RS03925;Dbxref=GenBank:WP_003901059.1;Name=WP_003901059.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215498.1;locus_tag=DKM08_RS03925;product=serine protease PepD;protein_id=WP_003901059.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 767246 767791 . + . ID=gene-DKM08_RS03930;Name=DKM08_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03930;old_locus_tag=DKM08_03920 NZ_QFYX01000001.1 Protein Homology CDS 767246 767791 . + 0 ID=cds-WP_003405127.1;Parent=gene-DKM08_RS03930;Dbxref=GenBank:WP_003405127.1;Name=WP_003405127.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215499.1;locus_tag=DKM08_RS03930;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003405127.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 767811 768266 . - . ID=gene-DKM08_RS03935;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=DKM08_RS03935;old_locus_tag=DKM08_03925 NZ_QFYX01000001.1 Protein Homology CDS 767811 768266 . - 0 ID=cds-WP_003405128.1;Parent=gene-DKM08_RS03935;Dbxref=GenBank:WP_003405128.1;Name=WP_003405128.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215500.1;locus_tag=DKM08_RS03935;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_003405128.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 768589 769335 . + . ID=gene-DKM08_RS03940;Name=DKM08_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03940;old_locus_tag=DKM08_03930 NZ_QFYX01000001.1 Protein Homology CDS 768589 769335 . + 0 ID=cds-WP_003405129.1;Parent=gene-DKM08_RS03940;Dbxref=GenBank:WP_003405129.1;Name=WP_003405129.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215501.1;locus_tag=DKM08_RS03940;product=ABC transporter ATP-binding protein;protein_id=WP_003405129.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 769328 771895 . + . ID=gene-DKM08_RS03945;Name=DKM08_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03945;old_locus_tag=DKM08_03935 NZ_QFYX01000001.1 Protein Homology CDS 769328 771895 . + 0 ID=cds-WP_003405131.1;Parent=gene-DKM08_RS03945;Dbxref=GenBank:WP_003405131.1;Name=WP_003405131.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215502.1;locus_tag=DKM08_RS03945;product=ABC transporter permease;protein_id=WP_003405131.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 771902 773062 . + . ID=gene-DKM08_RS03950;Name=DKM08_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03950;old_locus_tag=DKM08_03940 NZ_QFYX01000001.1 Protein Homology CDS 771902 773062 . + 0 ID=cds-WP_010950480.1;Parent=gene-DKM08_RS03950;Dbxref=GenBank:WP_010950480.1;Name=WP_010950480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215503.1;locus_tag=DKM08_RS03950;product=lipocalin-like domain-containing protein;protein_id=WP_010950480.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 773191 774168 . - . ID=gene-DKM08_RS03955;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=DKM08_RS03955;old_locus_tag=DKM08_03945 NZ_QFYX01000001.1 Protein Homology CDS 773191 774168 . - 0 ID=cds-WP_003405136.1;Parent=gene-DKM08_RS03955;Dbxref=GenBank:WP_003405136.1;Name=WP_003405136.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215504.1;locus_tag=DKM08_RS03955;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003405136.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 774229 774885 . - . ID=gene-DKM08_RS03960;Name=DKM08_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03960;old_locus_tag=DKM08_03950 NZ_QFYX01000001.1 Protein Homology CDS 774229 774885 . - 0 ID=cds-WP_003405138.1;Parent=gene-DKM08_RS03960;Dbxref=GenBank:WP_003405138.1;Name=WP_003405138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215505.1;locus_tag=DKM08_RS03960;product=SAF domain-containing protein;protein_id=WP_003405138.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 774958 775290 . - . ID=gene-DKM08_RS03965;Name=DKM08_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03965;old_locus_tag=DKM08_03955 NZ_QFYX01000001.1 Protein Homology CDS 774958 775290 . - 0 ID=cds-WP_003405142.1;Parent=gene-DKM08_RS03965;Dbxref=GenBank:WP_003405142.1;Name=WP_003405142.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215506.1;locus_tag=DKM08_RS03965;product=FmdB family zinc ribbon protein;protein_id=WP_003405142.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 775364 775957 . - . ID=gene-DKM08_RS03970;Name=DKM08_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS03970;old_locus_tag=DKM08_03960 NZ_QFYX01000001.1 Protein Homology CDS 775364 775957 . - 0 ID=cds-WP_003405144.1;Parent=gene-DKM08_RS03970;Dbxref=GenBank:WP_003405144.1;Name=WP_003405144.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215507.1;locus_tag=DKM08_RS03970;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_003405144.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 776058 776978 . + . ID=gene-DKM08_RS03975;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=DKM08_RS03975;old_locus_tag=DKM08_03965 NZ_QFYX01000001.1 Protein Homology CDS 776058 776978 . + 0 ID=cds-WP_003405145.1;Parent=gene-DKM08_RS03975;Dbxref=GenBank:WP_003405145.1;Name=WP_003405145.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215508.1;locus_tag=DKM08_RS03975;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_003405145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 777055 778335 . + . ID=gene-DKM08_RS03980;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=DKM08_RS03980;old_locus_tag=DKM08_03970 NZ_QFYX01000001.1 Protein Homology CDS 777055 778335 . + 0 ID=cds-WP_003405146.1;Parent=gene-DKM08_RS03980;Dbxref=GenBank:WP_003405146.1;Name=WP_003405146.1;Ontology_term=GO:0006777,GO:0061599,GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177776.1;locus_tag=DKM08_RS03980;product=gephyrin-like molybdotransferase Glp;protein_id=WP_003405146.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 778356 779009 . + . ID=gene-DKM08_RS03985;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=DKM08_RS03985;old_locus_tag=DKM08_03975 NZ_QFYX01000001.1 Protein Homology CDS 778356 779009 . + 0 ID=cds-WP_003898681.1;Parent=gene-DKM08_RS03985;Dbxref=GenBank:WP_003898681.1;Name=WP_003898681.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898681.1;locus_tag=DKM08_RS03985;product=GNAT family N-acetyltransferase;protein_id=WP_003898681.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 779170 780246 . + . ID=gene-DKM08_RS03990;Name=glpR;gbkey=Gene;gene=glpR;gene_biotype=protein_coding;locus_tag=DKM08_RS03990;old_locus_tag=DKM08_03980 NZ_QFYX01000001.1 Protein Homology CDS 779170 780246 . + 0 ID=cds-WP_010950481.1;Parent=gene-DKM08_RS03990;Dbxref=GenBank:WP_010950481.1;Name=WP_010950481.1;Ontology_term=GO:1990586;gbkey=CDS;gene=glpR;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215511.1;locus_tag=DKM08_RS03990;product=gephyrin-like molybdotransferase receptor GlpR;protein_id=WP_010950481.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 780297 780372 . + . ID=gene-DKM08_RS03995;Name=DKM08_RS03995;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS03995;old_locus_tag=DKM08_03985 NZ_QFYX01000001.1 tRNAscan-SE tRNA 780297 780372 . + . ID=rna-DKM08_RS03995;Parent=gene-DKM08_RS03995;anticodon=(pos:780330..780332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03995;product=tRNA-Ala NZ_QFYX01000001.1 tRNAscan-SE exon 780297 780372 . + . ID=exon-DKM08_RS03995-1;Parent=rna-DKM08_RS03995;anticodon=(pos:780330..780332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS03995;product=tRNA-Ala NZ_QFYX01000001.1 RefSeq gene 780647 780898 . + . ID=gene-DKM08_RS04005;Name=DKM08_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04005;old_locus_tag=DKM08_03995 NZ_QFYX01000001.1 Protein Homology CDS 780647 780898 . + 0 ID=cds-WP_003405150.1;Parent=gene-DKM08_RS04005;Dbxref=GenBank:WP_003405150.1;Name=WP_003405150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030028.1;locus_tag=DKM08_RS04005;product=hypothetical protein;protein_id=WP_003405150.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 780959 781168 . - . ID=gene-DKM08_RS04010;Name=DKM08_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04010;old_locus_tag=DKM08_04000 NZ_QFYX01000001.1 Protein Homology CDS 780959 781168 . - 0 ID=cds-WP_003405160.1;Parent=gene-DKM08_RS04010;Dbxref=GenBank:WP_003405160.1;Name=WP_003405160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627059.1;locus_tag=DKM08_RS04010;product=hypothetical protein;protein_id=WP_003405160.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 781172 781564 . - . ID=gene-DKM08_RS04015;Name=DKM08_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04015;old_locus_tag=DKM08_04005 NZ_QFYX01000001.1 Protein Homology CDS 781172 781564 . - 0 ID=cds-WP_009935838.1;Parent=gene-DKM08_RS04015;Dbxref=GenBank:WP_009935838.1;Name=WP_009935838.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292599.1;locus_tag=DKM08_RS04015;product=class I SAM-dependent methyltransferase;protein_id=WP_009935838.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 781534 782535 . + . ID=gene-DKM08_RS04020;Name=DKM08_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04020;old_locus_tag=DKM08_04010 NZ_QFYX01000001.1 Protein Homology CDS 781534 782535 . + 0 ID=cds-WP_003405164.1;Parent=gene-DKM08_RS04020;Dbxref=GenBank:WP_003405164.1;Name=WP_003405164.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215513.1;locus_tag=DKM08_RS04020;product=GNAT family N-acetyltransferase;protein_id=WP_003405164.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 782532 782621 . + . ID=gene-DKM08_RS21500;Name=DKM08_RS21500;end_range=782621,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21500;partial=true;pseudo=true;start_range=.,782532 NZ_QFYX01000001.1 Protein Homology CDS 782532 782621 . + 0 ID=cds-DKM08_RS21500;Parent=gene-DKM08_RS21500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=782621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872787.1;locus_tag=DKM08_RS21500;partial=true;product=DUF5642 family protein;pseudo=true;start_range=.,782532;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 782652 783311 . + . ID=gene-DKM08_RS04025;Name=DKM08_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04025;old_locus_tag=DKM08_04015 NZ_QFYX01000001.1 Protein Homology CDS 782652 783311 . + 0 ID=cds-WP_003911352.1;Parent=gene-DKM08_RS04025;Dbxref=GenBank:WP_003911352.1;Name=WP_003911352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911352.1;locus_tag=DKM08_RS04025;product=DUF5642 family protein;protein_id=WP_003911352.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 783317 783913 . - . ID=gene-DKM08_RS04030;Name=DKM08_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04030;old_locus_tag=DKM08_04020 NZ_QFYX01000001.1 Protein Homology CDS 783317 783913 . - 0 ID=cds-WP_003913180.1;Parent=gene-DKM08_RS04030;Dbxref=GenBank:WP_003913180.1;Name=WP_003913180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632682.1;locus_tag=DKM08_RS04030;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_003913180.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 783971 785179 . + . ID=gene-DKM08_RS04035;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=DKM08_RS04035;old_locus_tag=DKM08_04025 NZ_QFYX01000001.1 Protein Homology CDS 783971 785179 . + 0 ID=cds-WP_003405169.1;Parent=gene-DKM08_RS04035;Dbxref=GenBank:WP_003405169.1;Name=WP_003405169.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215517.1;locus_tag=DKM08_RS04035;product=arginine deiminase;protein_id=WP_003405169.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 785214 786725 . - . ID=gene-DKM08_RS04040;Name=DKM08_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04040;old_locus_tag=DKM08_04030 NZ_QFYX01000001.1 Protein Homology CDS 785214 786725 . - 0 ID=cds-WP_003405171.1;Parent=gene-DKM08_RS04040;Dbxref=GenBank:WP_003405171.1;Name=WP_003405171.1;Ontology_term=GO:0004169;gbkey=CDS;go_function=dolichyl-phosphate-mannose-protein mannosyltransferase activity|0004169||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215518.1;locus_tag=DKM08_RS04040;product=dolichyl-phosphate-mannose--protein mannosyltransferase;protein_id=WP_003405171.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 786808 787665 . + . ID=gene-DKM08_RS04045;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=DKM08_RS04045;old_locus_tag=DKM08_04035 NZ_QFYX01000001.1 Protein Homology CDS 786808 787665 . + 0 ID=cds-WP_003405173.1;Parent=gene-DKM08_RS04045;Dbxref=GenBank:WP_003405173.1;Name=WP_003405173.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215519.1;locus_tag=DKM08_RS04045;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_003405173.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 787675 788934 . - . ID=gene-DKM08_RS04050;Name=DKM08_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04050;old_locus_tag=DKM08_04040 NZ_QFYX01000001.1 Protein Homology CDS 787675 788934 . - 0 ID=cds-WP_003910253.1;Parent=gene-DKM08_RS04050;Dbxref=GenBank:WP_003910253.1;Name=WP_003910253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215520.1;locus_tag=DKM08_RS04050;product=hypothetical protein;protein_id=WP_003910253.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 789008 790294 . - . ID=gene-DKM08_RS04055;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=DKM08_RS04055;old_locus_tag=DKM08_04045 NZ_QFYX01000001.1 Protein Homology CDS 789008 790294 . - 0 ID=cds-WP_003405178.1;Parent=gene-DKM08_RS04055;Dbxref=GenBank:WP_003405178.1;Name=WP_003405178.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405178.1;locus_tag=DKM08_RS04055;product=aminodeoxychorismate synthase component I;protein_id=WP_003405178.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 790500 792203 . + . ID=gene-DKM08_RS04060;Name=DKM08_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04060;old_locus_tag=DKM08_04050 NZ_QFYX01000001.1 Protein Homology CDS 790500 792203 . + 0 ID=cds-WP_011799146.1;Parent=gene-DKM08_RS04060;Dbxref=GenBank:WP_011799146.1;Name=WP_011799146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215522.1;locus_tag=DKM08_RS04060;product=hypothetical protein;protein_id=WP_011799146.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 792230 793789 . - . ID=gene-DKM08_RS04065;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=DKM08_RS04065;old_locus_tag=DKM08_04055 NZ_QFYX01000001.1 Protein Homology CDS 792230 793789 . - 0 ID=cds-WP_003405183.1;Parent=gene-DKM08_RS04065;Dbxref=GenBank:WP_003405183.1;Name=WP_003405183.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215523.1;locus_tag=DKM08_RS04065;product=methionine--tRNA ligase;protein_id=WP_003405183.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 793809 794669 . + . ID=gene-DKM08_RS04070;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=DKM08_RS04070;old_locus_tag=DKM08_04060 NZ_QFYX01000001.1 Protein Homology CDS 793809 794669 . + 0 ID=cds-WP_003898688.1;Parent=gene-DKM08_RS04070;Dbxref=GenBank:WP_003898688.1;Name=WP_003898688.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898688.1;locus_tag=DKM08_RS04070;product=TatD family hydrolase;protein_id=WP_003898688.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 794838 795965 . + . ID=gene-DKM08_RS04075;Name=rpfB;gbkey=Gene;gene=rpfB;gene_biotype=protein_coding;locus_tag=DKM08_RS04075;old_locus_tag=DKM08_04065 NZ_QFYX01000001.1 Protein Homology CDS 794838 795965 . + 0 ID=cds-WP_031657245.1;Parent=gene-DKM08_RS04075;Dbxref=GenBank:WP_031657245.1;Name=WP_031657245.1;gbkey=CDS;gene=rpfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031657245.1;locus_tag=DKM08_RS04075;product=resuscitation-promoting factor protein RpfB;protein_id=WP_031657245.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 795938 796891 . + . ID=gene-DKM08_RS04080;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=DKM08_RS04080;old_locus_tag=DKM08_04070 NZ_QFYX01000001.1 Protein Homology CDS 795938 796891 . + 0 ID=cds-WP_003405191.1;Parent=gene-DKM08_RS04080;Dbxref=GenBank:WP_003405191.1;Name=WP_003405191.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215526.1;locus_tag=DKM08_RS04080;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_003405191.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 796941 797897 . + . ID=gene-DKM08_RS04085;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=DKM08_RS04085;old_locus_tag=DKM08_04075 NZ_QFYX01000001.1 Protein Homology CDS 796941 797897 . + 0 ID=cds-WP_003898690.1;Parent=gene-DKM08_RS04085;Dbxref=GenBank:WP_003898690.1;Name=WP_003898690.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;gbkey=CDS;gene=ispE;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912970.1;locus_tag=DKM08_RS04085;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_003898690.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 797914 798208 . + . ID=gene-DKM08_RS21975;Name=DKM08_RS21975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21975;old_locus_tag=DKM08_04080;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 797914 798208 . + 0 ID=cds-DKM08_RS21975;Parent=gene-DKM08_RS21975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215528.1;locus_tag=DKM08_RS21975;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 798412 800046 . + . ID=gene-DKM08_RS04100;Name=DKM08_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04100;old_locus_tag=DKM08_04090 NZ_QFYX01000001.1 Protein Homology CDS 798412 800046 . + 0 ID=cds-WP_003405202.1;Parent=gene-DKM08_RS04100;Dbxref=GenBank:WP_003405202.1;Name=WP_003405202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215529.1;locus_tag=DKM08_RS04100;product=fatty acyl-AMP ligase;protein_id=WP_003405202.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 800120 800695 . - . ID=gene-DKM08_RS04105;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=DKM08_RS04105;old_locus_tag=DKM08_04095 NZ_QFYX01000001.1 Protein Homology CDS 800120 800695 . - 0 ID=cds-WP_003405251.1;Parent=gene-DKM08_RS04105;Dbxref=GenBank:WP_003405251.1;Name=WP_003405251.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215530.1;locus_tag=DKM08_RS04105;product=aminoacyl-tRNA hydrolase;protein_id=WP_003405251.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 800708 801355 . - . ID=gene-DKM08_RS04110;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=DKM08_RS04110;old_locus_tag=DKM08_04100 NZ_QFYX01000001.1 Protein Homology CDS 800708 801355 . - 0 ID=cds-WP_003405254.1;Parent=gene-DKM08_RS04110;Dbxref=GenBank:WP_003405254.1;Name=WP_003405254.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215531.1;locus_tag=DKM08_RS04110;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_003405254.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 801572 802175 . - . ID=gene-DKM08_RS04115;Name=DKM08_RS04115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04115;old_locus_tag=DKM08_04105;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 801572 802175 . - 0 ID=cds-DKM08_RS04115;Parent=gene-DKM08_RS04115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014941374.1;locus_tag=DKM08_RS04115;product=LpqN/LpqT family lipoprotein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 802283 803263 . - . ID=gene-DKM08_RS04120;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=DKM08_RS04120;old_locus_tag=DKM08_04110 NZ_QFYX01000001.1 Protein Homology CDS 802283 803263 . - 0 ID=cds-WP_003405263.1;Parent=gene-DKM08_RS04120;Dbxref=GenBank:WP_003405263.1;Name=WP_003405263.1;Ontology_term=GO:0009058,GO:0000287,GO:0004749;gbkey=CDS;gene=prsA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215533.1;locus_tag=DKM08_RS04120;product=ribose-phosphate diphosphokinase;protein_id=WP_003405263.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 803355 804842 . - . ID=gene-DKM08_RS04125;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=DKM08_RS04125;old_locus_tag=DKM08_04115 NZ_QFYX01000001.1 Protein Homology CDS 803355 804842 . - 0 ID=cds-WP_023349475.1;Parent=gene-DKM08_RS04125;Dbxref=GenBank:WP_023349475.1;Name=WP_023349475.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215534.1;locus_tag=DKM08_RS04125;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_023349475.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 804858 804929 . - . ID=gene-DKM08_RS04130;Name=DKM08_RS04130;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS04130;old_locus_tag=DKM08_04120 NZ_QFYX01000001.1 tRNAscan-SE tRNA 804858 804929 . - . ID=rna-DKM08_RS04130;Parent=gene-DKM08_RS04130;anticodon=(pos:complement(804894..804896));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS04130;product=tRNA-Gln NZ_QFYX01000001.1 tRNAscan-SE exon 804858 804929 . - . ID=exon-DKM08_RS04130-1;Parent=rna-DKM08_RS04130;anticodon=(pos:complement(804894..804896));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS04130;product=tRNA-Gln NZ_QFYX01000001.1 RefSeq gene 805097 805690 . + . ID=gene-DKM08_RS04135;Name=DKM08_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04135;old_locus_tag=DKM08_04125 NZ_QFYX01000001.1 Protein Homology CDS 805097 805690 . + 0 ID=cds-WP_003405271.1;Parent=gene-DKM08_RS04135;Dbxref=GenBank:WP_003405271.1;Name=WP_003405271.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215535.1;locus_tag=DKM08_RS04135;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003405271.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 805749 809453 . + . ID=gene-DKM08_RS04140;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=DKM08_RS04140;old_locus_tag=DKM08_04130 NZ_QFYX01000001.1 Protein Homology CDS 805749 809453 . + 0 ID=cds-WP_003405273.1;Parent=gene-DKM08_RS04140;Dbxref=GenBank:WP_003405273.1;Name=WP_003405273.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215536.1;locus_tag=DKM08_RS04140;product=transcription-repair coupling factor;protein_id=WP_003405273.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 809453 810430 . + . ID=gene-DKM08_RS04145;Name=DKM08_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04145;old_locus_tag=DKM08_04135 NZ_QFYX01000001.1 Protein Homology CDS 809453 810430 . + 0 ID=cds-WP_003405276.1;Parent=gene-DKM08_RS04145;Dbxref=GenBank:WP_003405276.1;Name=WP_003405276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215537.1;locus_tag=DKM08_RS04145;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003405276.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 810518 811249 . + . ID=gene-DKM08_RS04150;Name=lpqU;gbkey=Gene;gene=lpqU;gene_biotype=protein_coding;locus_tag=DKM08_RS04150;old_locus_tag=DKM08_04140 NZ_QFYX01000001.1 Protein Homology CDS 810518 811249 . + 0 ID=cds-WP_003405288.1;Parent=gene-DKM08_RS04150;Dbxref=GenBank:WP_003405288.1;Name=WP_003405288.1;Ontology_term=GO:0004553;gbkey=CDS;gene=lpqU;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215538.1;locus_tag=DKM08_RS04150;product=lytic transglycosylase domain-containing protein;protein_id=WP_003405288.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 811346 812635 . + . ID=gene-DKM08_RS04155;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=DKM08_RS04155;old_locus_tag=DKM08_04145 NZ_QFYX01000001.1 Protein Homology CDS 811346 812635 . + 0 ID=cds-WP_003405290.1;Parent=gene-DKM08_RS04155;Dbxref=GenBank:WP_003405290.1;Name=WP_003405290.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215539.1;locus_tag=DKM08_RS04155;product=phosphopyruvate hydratase;protein_id=WP_003405290.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 812640 813326 . + . ID=gene-DKM08_RS04160;Name=DKM08_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04160;old_locus_tag=DKM08_04150 NZ_QFYX01000001.1 Protein Homology CDS 812640 813326 . + 0 ID=cds-WP_003405293.1;Parent=gene-DKM08_RS04160;Dbxref=GenBank:WP_003405293.1;Name=WP_003405293.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215540.1;locus_tag=DKM08_RS04160;product=FtsB family cell division protein;protein_id=WP_003405293.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 813319 813810 . + . ID=gene-DKM08_RS04165;Name=DKM08_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04165;old_locus_tag=DKM08_04155 NZ_QFYX01000001.1 Protein Homology CDS 813319 813810 . + 0 ID=cds-WP_003405296.1;Parent=gene-DKM08_RS04165;Dbxref=GenBank:WP_003405296.1;Name=WP_003405296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901072.1;locus_tag=DKM08_RS04165;product=DUF501 domain-containing protein;protein_id=WP_003405296.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 813801 814760 . + . ID=gene-DKM08_RS04170;Name=ppx2;gbkey=Gene;gene=ppx2;gene_biotype=protein_coding;locus_tag=DKM08_RS04170;old_locus_tag=DKM08_04160 NZ_QFYX01000001.1 Protein Homology CDS 813801 814760 . + 0 ID=cds-WP_003405299.1;Parent=gene-DKM08_RS04170;Dbxref=GenBank:WP_003405299.1;Name=WP_003405299.1;gbkey=CDS;gene=ppx2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215542.1;locus_tag=DKM08_RS04170;product=exopolyphosphatase Ppx2;protein_id=WP_003405299.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 815209 815889 . - . ID=gene-DKM08_RS04180;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=DKM08_RS04180;old_locus_tag=DKM08_04170 NZ_QFYX01000001.1 Protein Homology CDS 815209 815889 . - 0 ID=cds-WP_003405305.1;Parent=gene-DKM08_RS04180;Dbxref=GenBank:WP_003405305.1;Name=WP_003405305.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215543.1;locus_tag=DKM08_RS04180;product=two-component system response regulator KdpE;protein_id=WP_003405305.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 815886 818468 . - . ID=gene-DKM08_RS04185;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=DKM08_RS04185;old_locus_tag=DKM08_04175 NZ_QFYX01000001.1 Protein Homology CDS 815886 818468 . - 0 ID=cds-WP_003405308.1;Parent=gene-DKM08_RS04185;Dbxref=GenBank:WP_003405308.1;Name=WP_003405308.1;gbkey=CDS;gene=kdpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215544.1;locus_tag=DKM08_RS04185;product=sensor histidine kinase KdpD;protein_id=WP_003405308.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 818559 818705 . + . ID=gene-DKM08_RS04190;Name=DKM08_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04190;old_locus_tag=DKM08_04180 NZ_QFYX01000001.1 Protein Homology CDS 818559 818705 . + 0 ID=cds-WP_003405313.1;Parent=gene-DKM08_RS04190;Dbxref=GenBank:WP_003405313.1;Name=WP_003405313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405313.1;locus_tag=DKM08_RS04190;product=hypothetical protein;protein_id=WP_003405313.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 818702 818794 . + . ID=gene-DKM08_RS04195;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=DKM08_RS04195;old_locus_tag=DKM08_04185 NZ_QFYX01000001.1 Protein Homology CDS 818702 818794 . + 0 ID=cds-WP_003405316.1;Parent=gene-DKM08_RS04195;Dbxref=GenBank:WP_003405316.1;Name=WP_003405316.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177636.1;locus_tag=DKM08_RS04195;product=K(+)-transporting ATPase subunit F;protein_id=WP_003405316.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 818794 820509 . + . ID=gene-DKM08_RS04200;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=DKM08_RS04200;old_locus_tag=DKM08_04190 NZ_QFYX01000001.1 Protein Homology CDS 818794 820509 . + 0 ID=cds-WP_003405318.1;Parent=gene-DKM08_RS04200;Dbxref=GenBank:WP_003405318.1;Name=WP_003405318.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215545.1;locus_tag=DKM08_RS04200;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_003405318.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 820506 822635 . + . ID=gene-DKM08_RS04205;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=DKM08_RS04205;old_locus_tag=DKM08_04195 NZ_QFYX01000001.1 Protein Homology CDS 820506 822635 . + 0 ID=cds-WP_003405320.1;Parent=gene-DKM08_RS04205;Dbxref=GenBank:WP_003405320.1;Name=WP_003405320.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215546.1;locus_tag=DKM08_RS04205;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_003405320.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 822635 823204 . + . ID=gene-DKM08_RS04210;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=DKM08_RS04210;old_locus_tag=DKM08_04200 NZ_QFYX01000001.1 Protein Homology CDS 822635 823204 . + 0 ID=cds-WP_147020882.1;Parent=gene-DKM08_RS04210;Dbxref=GenBank:WP_147020882.1;Name=WP_147020882.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215547.1;locus_tag=DKM08_RS04210;product=K(+)-transporting ATPase subunit C;protein_id=WP_147020882.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 823208 824737 . - . ID=gene-DKM08_RS04215;Name=trcS;gbkey=Gene;gene=trcS;gene_biotype=protein_coding;locus_tag=DKM08_RS04215;old_locus_tag=DKM08_04205 NZ_QFYX01000001.1 Protein Homology CDS 823208 824737 . - 0 ID=cds-WP_003405324.1;Parent=gene-DKM08_RS04215;Dbxref=GenBank:WP_003405324.1;Name=WP_003405324.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;gene=trcS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215548.1;locus_tag=DKM08_RS04215;product=sensor histidine kinase;protein_id=WP_003405324.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 824745 825518 . - . ID=gene-DKM08_RS04220;Name=trcR;gbkey=Gene;gene=trcR;gene_biotype=protein_coding;locus_tag=DKM08_RS04220;old_locus_tag=DKM08_04210 NZ_QFYX01000001.1 Protein Homology CDS 824745 825518 . - 0 ID=cds-WP_003405328.1;Parent=gene-DKM08_RS04220;Dbxref=GenBank:WP_003405328.1;Name=WP_003405328.1;gbkey=CDS;gene=trcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215549.1;locus_tag=DKM08_RS04220;product=two-component system response regulator TrcR;protein_id=WP_003405328.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 825700 827140 . - . ID=gene-DKM08_RS04225;Name=DKM08_RS04225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04225;old_locus_tag=DKM08_04215;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 825700 827140 . - 0 ID=cds-DKM08_RS04225;Parent=gene-DKM08_RS04225;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=DKM08_RS04225;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 827326 827610 . - . ID=gene-DKM08_RS04230;Name=esxV;gbkey=Gene;gene=esxV;gene_biotype=protein_coding;locus_tag=DKM08_RS04230;old_locus_tag=DKM08_04220 NZ_QFYX01000001.1 Protein Homology CDS 827326 827610 . - 0 ID=cds-WP_003405333.1;Parent=gene-DKM08_RS04230;Dbxref=GenBank:WP_003405333.1;Name=WP_003405333.1;gbkey=CDS;gene=esxV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=DKM08_RS04230;product=type VII secretion system protein EsxV;protein_id=WP_003405333.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 827637 827933 . - . ID=gene-DKM08_RS04235;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=DKM08_RS04235;old_locus_tag=DKM08_04225 NZ_QFYX01000001.1 Protein Homology CDS 827637 827933 . - 0 ID=cds-WP_003405345.1;Parent=gene-DKM08_RS04235;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=DKM08_RS04235;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 828079 829254 . - . ID=gene-DKM08_RS04240;Name=DKM08_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04240;old_locus_tag=DKM08_04230 NZ_QFYX01000001.1 Protein Homology CDS 828079 829254 . - 0 ID=cds-WP_003405368.1;Parent=gene-DKM08_RS04240;Dbxref=GenBank:WP_003405368.1;Name=WP_003405368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177778.1;locus_tag=DKM08_RS04240;product=PPE family protein;protein_id=WP_003405368.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 829331 830158 . - . ID=gene-DKM08_RS04245;Name=DKM08_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04245;old_locus_tag=DKM08_04235 NZ_QFYX01000001.1 Protein Homology CDS 829331 830158 . - 0 ID=cds-WP_003405370.1;Parent=gene-DKM08_RS04245;Dbxref=GenBank:WP_003405370.1;Name=WP_003405370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177779.1;locus_tag=DKM08_RS04245;product=PPE family protein%2C SVP subgroup;protein_id=WP_003405370.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 830946 831185 . - . ID=gene-DKM08_RS04255;Name=DKM08_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04255;old_locus_tag=DKM08_04245 NZ_QFYX01000001.1 Protein Homology CDS 830946 831185 . - 0 ID=cds-WP_003405375.1;Parent=gene-DKM08_RS04255;Dbxref=GenBank:WP_003405375.1;Name=WP_003405375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936438.1;locus_tag=DKM08_RS04255;product=hypothetical protein;protein_id=WP_003405375.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 831354 832281 . - . ID=gene-DKM08_RS04265;Name=DKM08_RS04265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04265;old_locus_tag=DKM08_04255;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 831354 832281 . - 0 ID=cds-DKM08_RS04265;Parent=gene-DKM08_RS04265;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=DKM08_RS04265;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 832563 833588 . - . ID=gene-DKM08_RS04270;Name=DKM08_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04270;old_locus_tag=DKM08_04260 NZ_QFYX01000001.1 Protein Homology CDS 832563 833588 . - 0 ID=cds-WP_010950486.1;Parent=gene-DKM08_RS04270;Dbxref=GenBank:WP_010950486.1;Name=WP_010950486.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215559.1;locus_tag=DKM08_RS04270;product=S1 family peptidase;protein_id=WP_010950486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 833835 834458 . + . ID=gene-DKM08_RS04275;Name=DKM08_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04275;old_locus_tag=DKM08_04265 NZ_QFYX01000001.1 Protein Homology CDS 833835 834458 . + 0 ID=cds-WP_003405517.1;Parent=gene-DKM08_RS04275;Dbxref=GenBank:WP_003405517.1;Name=WP_003405517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215560.1;locus_tag=DKM08_RS04275;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_003405517.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 834455 835336 . + . ID=gene-DKM08_RS04280;Name=DKM08_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04280;old_locus_tag=DKM08_04270 NZ_QFYX01000001.1 Protein Homology CDS 834455 835336 . + 0 ID=cds-WP_003898703.1;Parent=gene-DKM08_RS04280;Dbxref=GenBank:WP_003898703.1;Name=WP_003898703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215561.1;locus_tag=DKM08_RS04280;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003898703.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 836206 837453 . + . ID=gene-DKM08_RS04290;Name=DKM08_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04290;old_locus_tag=DKM08_04280 NZ_QFYX01000001.1 Protein Homology CDS 836206 837453 . + 0 ID=cds-WP_003904572.1;Parent=gene-DKM08_RS04290;Dbxref=GenBank:WP_003904572.1;Name=WP_003904572.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=DKM08_RS04290;product=IS256-like element IS1081 family transposase;protein_id=WP_003904572.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 837821 838936 . - . ID=gene-DKM08_RS04295;Name=DKM08_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04295;old_locus_tag=DKM08_04285 NZ_QFYX01000001.1 Protein Homology CDS 837821 838936 . - 0 ID=cds-WP_003405582.1;Parent=gene-DKM08_RS04295;Dbxref=GenBank:WP_003405582.1;Name=WP_003405582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215564.1;locus_tag=DKM08_RS04295;product=hypothetical protein;protein_id=WP_003405582.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 838893 839096 . - . ID=gene-DKM08_RS04300;Name=DKM08_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04300;old_locus_tag=DKM08_04290 NZ_QFYX01000001.1 Protein Homology CDS 838893 839096 . - 0 ID=cds-WP_003405585.1;Parent=gene-DKM08_RS04300;Dbxref=GenBank:WP_003405585.1;Name=WP_003405585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405585.1;locus_tag=DKM08_RS04300;product=hypothetical protein;protein_id=WP_003405585.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 839169 839615 . + . ID=gene-DKM08_RS04305;Name=DKM08_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04305;old_locus_tag=DKM08_04295 NZ_QFYX01000001.1 Protein Homology CDS 839169 839615 . + 0 ID=cds-WP_003405595.1;Parent=gene-DKM08_RS04305;Dbxref=GenBank:WP_003405595.1;Name=WP_003405595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215565.1;locus_tag=DKM08_RS04305;product=oxidation-sensing regulator MosR;protein_id=WP_003405595.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 839663 840568 . + . ID=gene-DKM08_RS04310;Name=DKM08_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04310;old_locus_tag=DKM08_04300 NZ_QFYX01000001.1 Protein Homology CDS 839663 840568 . + 0 ID=cds-WP_003405600.1;Parent=gene-DKM08_RS04310;Dbxref=GenBank:WP_003405600.1;Name=WP_003405600.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215566.1;locus_tag=DKM08_RS04310;product=SDR family oxidoreductase;protein_id=WP_003405600.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 840606 840722 . - . ID=gene-DKM08_RS22635;Name=DKM08_RS22635;end_range=840722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22635;partial=true;pseudo=true;start_range=.,840606 NZ_QFYX01000001.1 Protein Homology CDS 840606 840722 . - 0 ID=cds-DKM08_RS22635;Parent=gene-DKM08_RS22635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=840722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=DKM08_RS22635;partial=true;product=EthD domain-containing protein;pseudo=true;start_range=.,840606;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 840727 841677 . - . ID=gene-DKM08_RS22640;Name=DKM08_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22640;old_locus_tag=DKM08_04305 NZ_QFYX01000001.1 Protein Homology CDS 840727 841677 . - 0 ID=cds-WP_369810505.1;Parent=gene-DKM08_RS22640;Dbxref=GenBank:WP_369810505.1;Name=WP_369810505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.6;locus_tag=DKM08_RS22640;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_369810505.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 842643 842894 . + . ID=gene-DKM08_RS21820;Name=DKM08_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21820 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 842643 842894 . + 0 ID=cds-WP_003898708.1;Parent=gene-DKM08_RS21820;Dbxref=GenBank:WP_003898708.1;Name=WP_003898708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21820;product=hypothetical protein;protein_id=WP_003898708.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 843057 843284 . + . ID=gene-DKM08_RS21825;Name=DKM08_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21825 NZ_QFYX01000001.1 Protein Homology CDS 843057 843284 . + 0 ID=cds-WP_234827446.1;Parent=gene-DKM08_RS21825;Dbxref=GenBank:WP_234827446.1;Name=WP_234827446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=DKM08_RS21825;product=Fic family protein;protein_id=WP_234827446.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 843710 844024 . + . ID=gene-DKM08_RS04340;Name=DKM08_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04340;old_locus_tag=DKM08_04330 NZ_QFYX01000001.1 Protein Homology CDS 843710 844024 . + 0 ID=cds-WP_003907556.1;Parent=gene-DKM08_RS04340;Dbxref=GenBank:WP_003907556.1;Name=WP_003907556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905442.1;locus_tag=DKM08_RS04340;product=integrase;protein_id=WP_003907556.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 843955 844155 . + . ID=gene-DKM08_RS21990;Name=DKM08_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21990;old_locus_tag=DKM08_04335 NZ_QFYX01000001.1 Protein Homology CDS 843955 844155 . + 0 ID=cds-WP_223695525.1;Parent=gene-DKM08_RS21990;Dbxref=GenBank:WP_223695525.1;Name=WP_223695525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=DKM08_RS21990;product=integrase;protein_id=WP_223695525.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 844178 844251 . + . ID=gene-DKM08_RS04350;Name=DKM08_RS04350;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS04350;old_locus_tag=DKM08_04340 NZ_QFYX01000001.1 tRNAscan-SE tRNA 844178 844251 . + . ID=rna-DKM08_RS04350;Parent=gene-DKM08_RS04350;anticodon=(pos:844212..844214);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS04350;product=tRNA-Leu NZ_QFYX01000001.1 tRNAscan-SE exon 844178 844251 . + . ID=exon-DKM08_RS04350-1;Parent=rna-DKM08_RS04350;anticodon=(pos:844212..844214);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS04350;product=tRNA-Leu NZ_QFYX01000001.1 RefSeq gene 844410 845174 . + . ID=gene-DKM08_RS04355;Name=DKM08_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04355;old_locus_tag=DKM08_04345 NZ_QFYX01000001.1 Protein Homology CDS 844410 845174 . + 0 ID=cds-WP_003900263.1;Parent=gene-DKM08_RS04355;Dbxref=GenBank:WP_003900263.1;Name=WP_003900263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215572.1;locus_tag=DKM08_RS04355;product=DUF427 domain-containing protein;protein_id=WP_003900263.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 845386 845550 . - . ID=gene-DKM08_RS04360;Name=DKM08_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04360;old_locus_tag=DKM08_04350 NZ_QFYX01000001.1 Protein Homology CDS 845386 845550 . - 0 ID=cds-WP_003898712.1;Parent=gene-DKM08_RS04360;Dbxref=GenBank:WP_003898712.1;Name=WP_003898712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405615.1;locus_tag=DKM08_RS04360;product=DUF222 domain-containing protein;protein_id=WP_003898712.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 846178 847359 . + . ID=gene-DKM08_RS04365;Name=DKM08_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04365;old_locus_tag=DKM08_04355 NZ_QFYX01000001.1 Protein Homology CDS 846178 847359 . + 0 ID=cds-WP_003405622.1;Parent=gene-DKM08_RS04365;Dbxref=GenBank:WP_003405622.1;Name=WP_003405622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215573.1;locus_tag=DKM08_RS04365;product=YncE family protein;protein_id=WP_003405622.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 847466 849097 . + . ID=gene-DKM08_RS04370;Name=DKM08_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04370;old_locus_tag=DKM08_04360 NZ_QFYX01000001.1 Protein Homology CDS 847466 849097 . + 0 ID=cds-WP_003405625.1;Parent=gene-DKM08_RS04370;Dbxref=GenBank:WP_003405625.1;Name=WP_003405625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215574.1;locus_tag=DKM08_RS04370;product=long-chain fatty acid--CoA ligase;protein_id=WP_003405625.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 849173 850237 . + . ID=gene-DKM08_RS04375;Name=DKM08_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04375;old_locus_tag=DKM08_04365 NZ_QFYX01000001.1 Protein Homology CDS 849173 850237 . + 0 ID=cds-WP_003405629.1;Parent=gene-DKM08_RS04375;Dbxref=GenBank:WP_003405629.1;Name=WP_003405629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215575.1;locus_tag=DKM08_RS04375;product=hypothetical protein;protein_id=WP_003405629.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 850290 850763 . + . ID=gene-DKM08_RS04380;Name=DKM08_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04380;old_locus_tag=DKM08_04370 NZ_QFYX01000001.1 Protein Homology CDS 850290 850763 . + 0 ID=cds-WP_003405633.1;Parent=gene-DKM08_RS04380;Dbxref=GenBank:WP_003405633.1;Name=WP_003405633.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215576.1;locus_tag=DKM08_RS04380;product=SRPBCC family protein;protein_id=WP_003405633.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 850797 851660 . + . ID=gene-DKM08_RS04385;Name=DKM08_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04385;old_locus_tag=DKM08_04375 NZ_QFYX01000001.1 Protein Homology CDS 850797 851660 . + 0 ID=cds-WP_003405636.1;Parent=gene-DKM08_RS04385;Dbxref=GenBank:WP_003405636.1;Name=WP_003405636.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215577.1;locus_tag=DKM08_RS04385;product=class II glutamine amidotransferase;protein_id=WP_003405636.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 851665 852522 . + . ID=gene-DKM08_RS04390;Name=DKM08_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04390;old_locus_tag=DKM08_04380 NZ_QFYX01000001.1 Protein Homology CDS 851665 852522 . + 0 ID=cds-WP_003405640.1;Parent=gene-DKM08_RS04390;Dbxref=GenBank:WP_003405640.1;Name=WP_003405640.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215578.1;locus_tag=DKM08_RS04390;product=patatin-like phospholipase family protein;protein_id=WP_003405640.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 852523 853605 . - . ID=gene-DKM08_RS04395;Name=DKM08_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04395;old_locus_tag=DKM08_04385 NZ_QFYX01000001.1 Protein Homology CDS 852523 853605 . - 0 ID=cds-WP_003405642.1;Parent=gene-DKM08_RS04395;Dbxref=GenBank:WP_003405642.1;Name=WP_003405642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215579.1;locus_tag=DKM08_RS04395;product=patatin family protein;protein_id=WP_003405642.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 853686 854105 . - . ID=gene-DKM08_RS04400;Name=lpqV;gbkey=Gene;gene=lpqV;gene_biotype=protein_coding;locus_tag=DKM08_RS04400;old_locus_tag=DKM08_04390 NZ_QFYX01000001.1 Protein Homology CDS 853686 854105 . - 0 ID=cds-WP_003405645.1;Parent=gene-DKM08_RS04400;Dbxref=GenBank:WP_003405645.1;Name=WP_003405645.1;gbkey=CDS;gene=lpqV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215580.1;locus_tag=DKM08_RS04400;product=lipoprotein LpqV;protein_id=WP_003405645.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 854217 854783 . + . ID=gene-DKM08_RS04405;Name=DKM08_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04405;old_locus_tag=DKM08_04395 NZ_QFYX01000001.1 Protein Homology CDS 854217 854783 . + 0 ID=cds-WP_003405649.1;Parent=gene-DKM08_RS04405;Dbxref=GenBank:WP_003405649.1;Name=WP_003405649.1;Ontology_term=GO:0008198,GO:0017172;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,cysteine dioxygenase activity|0017172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215581.1;locus_tag=DKM08_RS04405;product=cysteine dioxygenase;protein_id=WP_003405649.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 854780 855175 . + . ID=gene-DKM08_RS04410;Name=DKM08_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04410;old_locus_tag=DKM08_04400 NZ_QFYX01000001.1 Protein Homology CDS 854780 855175 . + 0 ID=cds-WP_003405651.1;Parent=gene-DKM08_RS04410;Dbxref=GenBank:WP_003405651.1;Name=WP_003405651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215582.1;locus_tag=DKM08_RS04410;product=rhodanese-like domain-containing protein;protein_id=WP_003405651.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 855203 857218 . - . ID=gene-DKM08_RS04415;Name=DKM08_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04415;old_locus_tag=DKM08_04405 NZ_QFYX01000001.1 Protein Homology CDS 855203 857218 . - 0 ID=cds-WP_010950488.1;Parent=gene-DKM08_RS04415;Dbxref=GenBank:WP_010950488.1;Name=WP_010950488.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177780.1;locus_tag=DKM08_RS04415;product=PE family protein;protein_id=WP_010950488.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 857551 859842 . - . ID=gene-DKM08_RS22645;Name=DKM08_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22645;old_locus_tag=DKM08_04410 NZ_QFYX01000001.1 Protein Homology CDS 857551 859842 . - 0 ID=cds-WP_010950489.1;Parent=gene-DKM08_RS22645;Dbxref=GenBank:WP_010950489.1;Name=WP_010950489.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287988.1;locus_tag=DKM08_RS22645;product=PE family protein;protein_id=WP_010950489.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 860204 861967 . - . ID=gene-DKM08_RS04425;Name=DKM08_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04425;old_locus_tag=DKM08_04415 NZ_QFYX01000001.1 Protein Homology CDS 860204 861967 . - 0 ID=cds-WP_003405708.1;Parent=gene-DKM08_RS04425;Dbxref=GenBank:WP_003405708.1;Name=WP_003405708.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215585.1;locus_tag=DKM08_RS04425;product=alpha/beta hydrolase;protein_id=WP_003405708.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 861964 862737 . - . ID=gene-DKM08_RS04430;Name=DKM08_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04430;old_locus_tag=DKM08_04420 NZ_QFYX01000001.1 Protein Homology CDS 861964 862737 . - 0 ID=cds-WP_003405712.1;Parent=gene-DKM08_RS04430;Dbxref=GenBank:WP_003405712.1;Name=WP_003405712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215586.1;locus_tag=DKM08_RS04430;product=enoyl-CoA hydratase;protein_id=WP_003405712.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 862749 863786 . - . ID=gene-DKM08_RS04435;Name=DKM08_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04435;old_locus_tag=DKM08_04425 NZ_QFYX01000001.1 Protein Homology CDS 862749 863786 . - 0 ID=cds-WP_003405716.1;Parent=gene-DKM08_RS04435;Dbxref=GenBank:WP_003405716.1;Name=WP_003405716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215587.1;locus_tag=DKM08_RS04435;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003405716.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 863973 864809 . + . ID=gene-DKM08_RS04440;Name=DKM08_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04440;old_locus_tag=DKM08_04430 NZ_QFYX01000001.1 Protein Homology CDS 863973 864809 . + 0 ID=cds-WP_003405719.1;Parent=gene-DKM08_RS04440;Dbxref=GenBank:WP_003405719.1;Name=WP_003405719.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215588.1;locus_tag=DKM08_RS04440;product=Bax inhibitor-1/YccA family protein;protein_id=WP_003405719.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 864925 865776 . + . ID=gene-DKM08_RS04445;Name=DKM08_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04445;old_locus_tag=DKM08_04435 NZ_QFYX01000001.1 Protein Homology CDS 864925 865776 . + 0 ID=cds-WP_003405722.1;Parent=gene-DKM08_RS04445;Dbxref=GenBank:WP_003405722.1;Name=WP_003405722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215589.1;locus_tag=DKM08_RS04445;product=hypothetical protein;protein_id=WP_003405722.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 865850 867067 . - . ID=gene-DKM08_RS04450;Name=DKM08_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04450;old_locus_tag=DKM08_04440 NZ_QFYX01000001.1 Protein Homology CDS 865850 867067 . - 0 ID=cds-WP_003405724.1;Parent=gene-DKM08_RS04450;Dbxref=GenBank:WP_003405724.1;Name=WP_003405724.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215590.1;locus_tag=DKM08_RS04450;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003405724.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 867120 868064 . - . ID=gene-DKM08_RS04455;Name=DKM08_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04455;old_locus_tag=DKM08_04445 NZ_QFYX01000001.1 Protein Homology CDS 867120 868064 . - 0 ID=cds-WP_003405726.1;Parent=gene-DKM08_RS04455;Dbxref=GenBank:WP_003405726.1;Name=WP_003405726.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215591.1;locus_tag=DKM08_RS04455;product=SGNH/GDSL hydrolase family protein;protein_id=WP_003405726.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 868287 869354 . + . ID=gene-DKM08_RS04460;Name=lipU;gbkey=Gene;gene=lipU;gene_biotype=protein_coding;locus_tag=DKM08_RS04460;old_locus_tag=DKM08_04450 NZ_QFYX01000001.1 Protein Homology CDS 868287 869354 . + 0 ID=cds-WP_003405728.1;Parent=gene-DKM08_RS04460;Dbxref=GenBank:WP_003405728.1;Name=WP_003405728.1;gbkey=CDS;gene=lipU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918181.1;locus_tag=DKM08_RS04460;product=lipase LipU;protein_id=WP_003405728.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 869411 870805 . + . ID=gene-DKM08_RS04465;Name=cbs;gbkey=Gene;gene=cbs;gene_biotype=protein_coding;locus_tag=DKM08_RS04465;old_locus_tag=DKM08_04455 NZ_QFYX01000001.1 Protein Homology CDS 869411 870805 . + 0 ID=cds-WP_003405730.1;Parent=gene-DKM08_RS04465;Dbxref=GenBank:WP_003405730.1;Name=WP_003405730.1;Ontology_term=GO:0019343,GO:0004122,GO:0005737;gbkey=CDS;gene=cbs;go_component=cytoplasm|0005737||IEA;go_function=cystathionine beta-synthase activity|0004122||IEA;go_process=cysteine biosynthetic process via cystathionine|0019343||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177782.1;locus_tag=DKM08_RS04465;product=cystathionine beta-synthase;protein_id=WP_003405730.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 871007 871729 . + . ID=gene-DKM08_RS04470;Name=pra;gbkey=Gene;gene=pra;gene_biotype=protein_coding;locus_tag=DKM08_RS04470;old_locus_tag=DKM08_04460 NZ_QFYX01000001.1 Protein Homology CDS 871007 871729 . + 0 ID=cds-WP_003405732.1;Parent=gene-DKM08_RS04470;Dbxref=GenBank:WP_003405732.1;Name=WP_003405732.1;Ontology_term=GO:0005886;gbkey=CDS;gene=pra;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215594.1;locus_tag=DKM08_RS04470;product=RDD family protein;protein_id=WP_003405732.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 871761 872927 . + . ID=gene-DKM08_RS04475;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=DKM08_RS04475;old_locus_tag=DKM08_04465 NZ_QFYX01000001.1 Protein Homology CDS 871761 872927 . + 0 ID=cds-WP_003405736.1;Parent=gene-DKM08_RS04475;Dbxref=GenBank:WP_003405736.1;Name=WP_003405736.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;gene=metB;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215595.1;locus_tag=DKM08_RS04475;product=cystathionine gamma-synthase;protein_id=WP_003405736.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 872998 873492 . - . ID=gene-DKM08_RS04480;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=DKM08_RS04480;old_locus_tag=DKM08_04470 NZ_QFYX01000001.1 Protein Homology CDS 872998 873492 . - 0 ID=cds-WP_003405742.1;Parent=gene-DKM08_RS04480;Dbxref=GenBank:WP_003405742.1;Name=WP_003405742.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908869.1;locus_tag=DKM08_RS04480;product=transcription elongation factor GreA;protein_id=WP_003405742.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 873678 874112 . - . ID=gene-DKM08_RS04485;Name=DKM08_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04485;old_locus_tag=DKM08_04475 NZ_QFYX01000001.1 Protein Homology CDS 873678 874112 . - 0 ID=cds-WP_003405744.1;Parent=gene-DKM08_RS04485;Dbxref=GenBank:WP_003405744.1;Name=WP_003405744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215597.1;locus_tag=DKM08_RS04485;product=DUF4307 domain-containing protein;protein_id=WP_003405744.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 874214 875080 . + . ID=gene-DKM08_RS04490;Name=mca;gbkey=Gene;gene=mca;gene_biotype=protein_coding;locus_tag=DKM08_RS04490;old_locus_tag=DKM08_04480 NZ_QFYX01000001.1 Protein Homology CDS 874214 875080 . + 0 ID=cds-WP_003405746.1;Parent=gene-DKM08_RS04490;Dbxref=GenBank:WP_003405746.1;Name=WP_003405746.1;Ontology_term=GO:0010126;gbkey=CDS;gene=mca;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215598.1;locus_tag=DKM08_RS04490;product=mycothiol conjugate amidase Mca;protein_id=WP_003405746.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 875077 875343 . + . ID=gene-DKM08_RS04495;Name=DKM08_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04495;old_locus_tag=DKM08_04485 NZ_QFYX01000001.1 Protein Homology CDS 875077 875343 . + 0 ID=cds-WP_003405749.1;Parent=gene-DKM08_RS04495;Dbxref=GenBank:WP_003405749.1;Name=WP_003405749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215599.1;locus_tag=DKM08_RS04495;product=hypothetical protein;protein_id=WP_003405749.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 875330 877351 . + . ID=gene-DKM08_RS04500;Name=DKM08_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04500;old_locus_tag=DKM08_04490 NZ_QFYX01000001.1 Protein Homology CDS 875330 877351 . + 0 ID=cds-WP_003405750.1;Parent=gene-DKM08_RS04500;Dbxref=GenBank:WP_003405750.1;Name=WP_003405750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215600.1;locus_tag=DKM08_RS04500;product=thioredoxin domain-containing protein;protein_id=WP_003405750.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 877450 878178 . - . ID=gene-DKM08_RS04505;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=DKM08_RS04505;old_locus_tag=DKM08_04495 NZ_QFYX01000001.1 Protein Homology CDS 877450 878178 . - 0 ID=cds-WP_003901993.1;Parent=gene-DKM08_RS04505;Dbxref=GenBank:WP_003901993.1;Name=WP_003901993.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215601.1;locus_tag=DKM08_RS04505;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_003901993.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 878289 879077 . + . ID=gene-DKM08_RS04510;Name=DKM08_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04510;old_locus_tag=DKM08_04500 NZ_QFYX01000001.1 Protein Homology CDS 878289 879077 . + 0 ID=cds-WP_003903314.1;Parent=gene-DKM08_RS04510;Dbxref=GenBank:WP_003903314.1;Name=WP_003903314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215602.1;locus_tag=DKM08_RS04510;product=(2Z%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003903314.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 879254 881578 . + . ID=gene-DKM08_RS04520;Name=DKM08_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04520;old_locus_tag=DKM08_04510 NZ_QFYX01000001.1 Protein Homology CDS 879254 881578 . + 0 ID=cds-WP_010950490.1;Parent=gene-DKM08_RS04520;Dbxref=GenBank:WP_010950490.1;Name=WP_010950490.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177783.1;locus_tag=DKM08_RS04520;product=PE family protein;protein_id=WP_010950490.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 881785 882075 . + . ID=gene-DKM08_RS22650;Name=DKM08_RS22650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22650;old_locus_tag=DKM08_04515;partial=true;pseudo=true;start_range=.,881785 NZ_QFYX01000001.1 Protein Homology CDS 881785 882075 . + 0 ID=cds-DKM08_RS22650;Parent=gene-DKM08_RS22650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878551.1;locus_tag=DKM08_RS22650;partial=true;product=undecaprenyl diphosphate synthase family protein;pseudo=true;start_range=.,881785;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 882228 882662 . + . ID=gene-DKM08_RS22655;Name=DKM08_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22655;old_locus_tag=DKM08_04520 NZ_QFYX01000001.1 Protein Homology CDS 882228 882662 . + 0 ID=cds-WP_003900271.1;Parent=gene-DKM08_RS22655;Dbxref=GenBank:WP_003900271.1;Name=WP_003900271.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585063.1;locus_tag=DKM08_RS22655;product=PE family protein;protein_id=WP_003900271.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 882679 882846 . + . ID=gene-DKM08_RS22000;Name=DKM08_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22000 NZ_QFYX01000001.1 Protein Homology CDS 882679 882846 . + 0 ID=cds-WP_003917409.1;Parent=gene-DKM08_RS22000;Dbxref=GenBank:WP_003917409.1;Name=WP_003917409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351503.1;locus_tag=DKM08_RS22000;product=PE family protein;protein_id=WP_003917409.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 882812 882928 . + . ID=gene-DKM08_RS22660;Name=DKM08_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22660 NZ_QFYX01000001.1 Protein Homology CDS 882812 882928 . + 0 ID=cds-WP_349839371.1;Parent=gene-DKM08_RS22660;Dbxref=GenBank:WP_349839371.1;Name=WP_349839371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012762.6;locus_tag=DKM08_RS22660;product=hypothetical protein;protein_id=WP_349839371.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 882940 883122 . + . ID=gene-DKM08_RS04540;Name=DKM08_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04540;old_locus_tag=DKM08_04530 NZ_QFYX01000001.1 Protein Homology CDS 882940 883122 . + 0 ID=cds-WP_003898724.1;Parent=gene-DKM08_RS04540;Dbxref=GenBank:WP_003898724.1;Name=WP_003898724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030029.1;locus_tag=DKM08_RS04540;product=hypothetical protein;protein_id=WP_003898724.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 883232 883336 . + . ID=gene-DKM08_RS22005;Name=DKM08_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22005;old_locus_tag=DKM08_04535 NZ_QFYX01000001.1 Protein Homology CDS 883232 883336 . + 0 ID=cds-WP_003405770.1;Parent=gene-DKM08_RS22005;Dbxref=GenBank:WP_003405770.1;Name=WP_003405770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405770.1;locus_tag=DKM08_RS22005;product=endo-1%2C4-beta-glucanase;protein_id=WP_003405770.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 883314 883769 . + . ID=gene-DKM08_RS04550;Name=DKM08_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04550;old_locus_tag=DKM08_04540 NZ_QFYX01000001.1 Protein Homology CDS 883314 883769 . + 0 ID=cds-WP_003900273.1;Parent=gene-DKM08_RS04550;Dbxref=GenBank:WP_003900273.1;Name=WP_003900273.1;Ontology_term=GO:0000272,GO:0008810;gbkey=CDS;go_function=cellulase activity|0008810||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627137.1;locus_tag=DKM08_RS04550;product=GH12 family glycosyl hydrolase domain-containing protein;protein_id=WP_003900273.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 884184 886736 . + . ID=gene-DKM08_RS04555;Name=DKM08_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04555;old_locus_tag=DKM08_04545 NZ_QFYX01000001.1 Protein Homology CDS 884184 886736 . + 0 ID=cds-WP_147020884.1;Parent=gene-DKM08_RS04555;Dbxref=GenBank:WP_147020884.1;Name=WP_147020884.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177786.1;locus_tag=DKM08_RS04555;product=PE family protein;protein_id=WP_147020884.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 886954 887892 . - . ID=gene-DKM08_RS04560;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=DKM08_RS04560;old_locus_tag=DKM08_04550 NZ_QFYX01000001.1 Protein Homology CDS 886954 887892 . - 0 ID=cds-WP_003405790.1;Parent=gene-DKM08_RS04560;Dbxref=GenBank:WP_003405790.1;Name=WP_003405790.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875370.1;locus_tag=DKM08_RS04560;product=type I pantothenate kinase;protein_id=WP_003405790.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 888280 889560 . + . ID=gene-DKM08_RS04565;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=DKM08_RS04565;old_locus_tag=DKM08_04555 NZ_QFYX01000001.1 Protein Homology CDS 888280 889560 . + 0 ID=cds-WP_003405797.1;Parent=gene-DKM08_RS04565;Dbxref=GenBank:WP_003405797.1;Name=WP_003405797.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177787.3;locus_tag=DKM08_RS04565;product=serine hydroxymethyltransferase;protein_id=WP_003405797.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 889665 890492 . + . ID=gene-DKM08_RS04570;Name=DKM08_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04570;old_locus_tag=DKM08_04560 NZ_QFYX01000001.1 Protein Homology CDS 889665 890492 . + 0 ID=cds-WP_003405801.1;Parent=gene-DKM08_RS04570;Dbxref=GenBank:WP_003405801.1;Name=WP_003405801.1;Ontology_term=GO:0006631,GO:0045300;gbkey=CDS;go_function=stearoyl-[ACP] desaturase activity|0045300||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215610.1;locus_tag=DKM08_RS04570;product=acyl-ACP desaturase;protein_id=WP_003405801.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 890703 892004 . + . ID=gene-DKM08_RS04575;Name=DKM08_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04575;old_locus_tag=DKM08_04565 NZ_QFYX01000001.1 Protein Homology CDS 890703 892004 . + 0 ID=cds-WP_003405802.1;Parent=gene-DKM08_RS04575;Dbxref=GenBank:WP_003405802.1;Name=WP_003405802.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215611.1;locus_tag=DKM08_RS04575;product=PhoH family protein;protein_id=WP_003405802.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 892091 892966 . + . ID=gene-DKM08_RS04585;Name=DKM08_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04585;old_locus_tag=DKM08_04575 NZ_QFYX01000001.1 Protein Homology CDS 892091 892966 . + 0 ID=cds-WP_003405803.1;Parent=gene-DKM08_RS04585;Dbxref=GenBank:WP_003405803.1;Name=WP_003405803.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215612.1;locus_tag=DKM08_RS04585;product=polysaccharide deacetylase family protein;protein_id=WP_003405803.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 892969 893850 . - . ID=gene-DKM08_RS04590;Name=DKM08_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04590;old_locus_tag=DKM08_04580 NZ_QFYX01000001.1 Protein Homology CDS 892969 893850 . - 0 ID=cds-WP_010950492.1;Parent=gene-DKM08_RS04590;Dbxref=GenBank:WP_010950492.1;Name=WP_010950492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215613.1;locus_tag=DKM08_RS04590;product=hypothetical protein;protein_id=WP_010950492.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 893847 895271 . - . ID=gene-DKM08_RS04595;Name=fum;gbkey=Gene;gene=fum;gene_biotype=protein_coding;locus_tag=DKM08_RS04595;old_locus_tag=DKM08_04585 NZ_QFYX01000001.1 Protein Homology CDS 893847 895271 . - 0 ID=cds-WP_003405805.1;Parent=gene-DKM08_RS04595;Dbxref=GenBank:WP_003405805.1;Name=WP_003405805.1;Ontology_term=GO:0006099,GO:0006106,GO:0006108,GO:0004333;gbkey=CDS;gene=fum;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,fumarate metabolic process|0006106||IEA,malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215614.1;locus_tag=DKM08_RS04595;product=class II fumarate hydratase;protein_id=WP_003405805.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 895302 896390 . - . ID=gene-DKM08_RS04600;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=DKM08_RS04600;old_locus_tag=DKM08_04590 NZ_QFYX01000001.1 Protein Homology CDS 895302 896390 . - 0 ID=cds-WP_003898726.1;Parent=gene-DKM08_RS04600;Dbxref=GenBank:WP_003898726.1;Name=WP_003898726.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215615.3;locus_tag=DKM08_RS04600;product=class II fructose-bisphosphatase;protein_id=WP_003898726.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 896446 897090 . + . ID=gene-DKM08_RS04605;Name=DKM08_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04605;old_locus_tag=DKM08_04595 NZ_QFYX01000001.1 Protein Homology CDS 896446 897090 . + 0 ID=cds-WP_003915494.1;Parent=gene-DKM08_RS04605;Dbxref=GenBank:WP_003915494.1;Name=WP_003915494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915494.1;locus_tag=DKM08_RS04605;product=DUF4245 domain-containing protein;protein_id=WP_003915494.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 897097 898253 . - . ID=gene-DKM08_RS04610;Name=DKM08_RS04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04610;old_locus_tag=DKM08_04600;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 897097 898253 . - 0 ID=cds-DKM08_RS04610;Parent=gene-DKM08_RS04610;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215617.1;locus_tag=DKM08_RS04610;product=AI-2E family transporter;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 898365 898676 . - . ID=gene-DKM08_RS04615;Name=mazF3;gbkey=Gene;gene=mazF3;gene_biotype=protein_coding;gene_synonym=mazF-mt6;locus_tag=DKM08_RS04615;old_locus_tag=DKM08_04605 NZ_QFYX01000001.1 Protein Homology CDS 898365 898676 . - 0 ID=cds-WP_003405820.1;Parent=gene-DKM08_RS04615;Dbxref=GenBank:WP_003405820.1;Name=WP_003405820.1;gbkey=CDS;gene=mazF3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215618.1;locus_tag=DKM08_RS04615;product=type II toxin-antitoxin system toxin endoribonuclease MazF3;protein_id=WP_003405820.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 898676 898996 . - . ID=gene-DKM08_RS04620;Name=mazE3;gbkey=Gene;gene=mazE3;gene_biotype=protein_coding;locus_tag=DKM08_RS04620;old_locus_tag=DKM08_04610 NZ_QFYX01000001.1 Protein Homology CDS 898676 898996 . - 0 ID=cds-WP_003405836.1;Parent=gene-DKM08_RS04620;Dbxref=GenBank:WP_003405836.1;Name=WP_003405836.1;gbkey=CDS;gene=mazE3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405836.1;locus_tag=DKM08_RS04620;product=type II toxin-antitoxin system antitoxin MazE3;protein_id=WP_003405836.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 899006 900542 . + . ID=gene-DKM08_RS04625;Name=DKM08_RS04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04625;old_locus_tag=DKM08_04615;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 899006 900542 . + 0 ID=cds-DKM08_RS04625;Parent=gene-DKM08_RS04625;Note=frameshifted;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724013.1;locus_tag=DKM08_RS04625;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 900549 901661 . - . ID=gene-DKM08_RS04630;Name=DKM08_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04630;old_locus_tag=DKM08_04620 NZ_QFYX01000001.1 Protein Homology CDS 900549 901661 . - 0 ID=cds-WP_003405840.1;Parent=gene-DKM08_RS04630;Dbxref=GenBank:WP_003405840.1;Name=WP_003405840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215622.1;locus_tag=DKM08_RS04630;product=3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase;protein_id=WP_003405840.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 901671 901928 . - . ID=gene-DKM08_RS04635;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=DKM08_RS04635;old_locus_tag=DKM08_04625 NZ_QFYX01000001.1 Protein Homology CDS 901671 901928 . - 0 ID=cds-WP_003405844.1;Parent=gene-DKM08_RS04635;Dbxref=GenBank:WP_003405844.1;Name=WP_003405844.1;Ontology_term=GO:0006308,GO:0008855;gbkey=CDS;gene=xseB;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215623.1;locus_tag=DKM08_RS04635;product=exodeoxyribonuclease VII small subunit;protein_id=WP_003405844.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 901918 903165 . - . ID=gene-DKM08_RS04640;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=DKM08_RS04640;old_locus_tag=DKM08_04630 NZ_QFYX01000001.1 Protein Homology CDS 901918 903165 . - 0 ID=cds-WP_003405846.1;Parent=gene-DKM08_RS04640;Dbxref=GenBank:WP_003405846.1;Name=WP_003405846.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215624.1;locus_tag=DKM08_RS04640;product=exodeoxyribonuclease VII large subunit;protein_id=WP_003405846.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 903162 903800 . - . ID=gene-DKM08_RS04645;Name=DKM08_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04645;old_locus_tag=DKM08_04635 NZ_QFYX01000001.1 Protein Homology CDS 903162 903800 . - 0 ID=cds-WP_003898730.1;Parent=gene-DKM08_RS04645;Dbxref=GenBank:WP_003898730.1;Name=WP_003898730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215625.1;locus_tag=DKM08_RS04645;product=lipid droplet-associated protein;protein_id=WP_003898730.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 903890 904897 . + . ID=gene-DKM08_RS04650;Name=DKM08_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04650;old_locus_tag=DKM08_04640 NZ_QFYX01000001.1 Protein Homology CDS 903890 904897 . + 0 ID=cds-WP_003405853.1;Parent=gene-DKM08_RS04650;Dbxref=GenBank:WP_003405853.1;Name=WP_003405853.1;Ontology_term=GO:0019288,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177788.1;locus_tag=DKM08_RS04650;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003405853.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 904914 905897 . - . ID=gene-DKM08_RS04655;Name=DKM08_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04655;old_locus_tag=DKM08_04645 NZ_QFYX01000001.1 Protein Homology CDS 904914 905897 . - 0 ID=cds-WP_023349486.1;Parent=gene-DKM08_RS04655;Dbxref=GenBank:WP_023349486.1;Name=WP_023349486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215627.2;locus_tag=DKM08_RS04655;product=DUF6542 domain-containing protein;protein_id=WP_023349486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 905960 907033 . + . ID=gene-DKM08_RS04660;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=DKM08_RS04660;old_locus_tag=DKM08_04650 NZ_QFYX01000001.1 Protein Homology CDS 905960 907033 . + 0 ID=cds-WP_003405860.1;Parent=gene-DKM08_RS04660;Dbxref=GenBank:WP_003405860.1;Name=WP_003405860.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215628.1;locus_tag=DKM08_RS04660;product=redox-regulated ATPase YchF;protein_id=WP_003405860.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 907121 907318 . + . ID=gene-DKM08_RS04665;Name=DKM08_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04665;old_locus_tag=DKM08_04655 NZ_QFYX01000001.1 Protein Homology CDS 907121 907318 . + 0 ID=cds-WP_003405863.1;Parent=gene-DKM08_RS04665;Dbxref=GenBank:WP_003405863.1;Name=WP_003405863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215629.1;locus_tag=DKM08_RS04665;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003405863.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 907315 907689 . + . ID=gene-DKM08_RS04670;Name=DKM08_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04670;old_locus_tag=DKM08_04660 NZ_QFYX01000001.1 Protein Homology CDS 907315 907689 . + 0 ID=cds-WP_003405865.1;Parent=gene-DKM08_RS04670;Dbxref=GenBank:WP_003405865.1;Name=WP_003405865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215630.1;locus_tag=DKM08_RS04670;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003405865.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 907892 908590 . + . ID=gene-DKM08_RS04675;Name=DKM08_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04675;old_locus_tag=DKM08_04665 NZ_QFYX01000001.1 Protein Homology CDS 907892 908590 . + 0 ID=cds-WP_010950494.1;Parent=gene-DKM08_RS04675;Dbxref=GenBank:WP_010950494.1;Name=WP_010950494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215631.1;locus_tag=DKM08_RS04675;product=hypothetical protein;protein_id=WP_010950494.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 908708 908893 . + . ID=gene-DKM08_RS04680;Name=DKM08_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04680;old_locus_tag=DKM08_04670 NZ_QFYX01000001.1 Protein Homology CDS 908708 908893 . + 0 ID=cds-WP_003901093.1;Parent=gene-DKM08_RS04680;Dbxref=GenBank:WP_003901093.1;Name=WP_003901093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215632.1;locus_tag=DKM08_RS04680;product=hypothetical protein;protein_id=WP_003901093.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 908820 909095 . - . ID=gene-DKM08_RS04685;Name=DKM08_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04685;old_locus_tag=DKM08_04675 NZ_QFYX01000001.1 Protein Homology CDS 908820 909095 . - 0 ID=cds-WP_003405867.1;Parent=gene-DKM08_RS04685;Dbxref=GenBank:WP_003405867.1;Name=WP_003405867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627157.1;locus_tag=DKM08_RS04685;product=hypothetical protein;protein_id=WP_003405867.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 909338 909661 . + . ID=gene-DKM08_RS04690;Name=DKM08_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04690;old_locus_tag=DKM08_04680 NZ_QFYX01000001.1 Protein Homology CDS 909338 909661 . + 0 ID=cds-WP_003405871.1;Parent=gene-DKM08_RS04690;Dbxref=GenBank:WP_003405871.1;Name=WP_003405871.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215633.1;locus_tag=DKM08_RS04690;product=putative quinol monooxygenase;protein_id=WP_003405871.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 909676 910386 . - . ID=gene-DKM08_RS04695;Name=DKM08_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04695;old_locus_tag=DKM08_04685 NZ_QFYX01000001.1 Protein Homology CDS 909676 910386 . - 0 ID=cds-WP_003911399.1;Parent=gene-DKM08_RS04695;Dbxref=GenBank:WP_003911399.1;Name=WP_003911399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013828012.1;locus_tag=DKM08_RS04695;product=hypothetical protein;protein_id=WP_003911399.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 910408 910617 . + . ID=gene-DKM08_RS21520;Name=DKM08_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21520 NZ_QFYX01000001.1 Protein Homology CDS 910408 910617 . + 0 ID=cds-WP_003911400.1;Parent=gene-DKM08_RS21520;Dbxref=GenBank:WP_003911400.1;Name=WP_003911400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016706054.1;locus_tag=DKM08_RS21520;product=hypothetical protein;protein_id=WP_003911400.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 910569 911339 . - . ID=gene-DKM08_RS04700;Name=DKM08_RS04700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04700;old_locus_tag=DKM08_04690;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 910569 911339 . - 0 ID=cds-DKM08_RS04700;Parent=gene-DKM08_RS04700;Note=frameshifted;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729832.1;locus_tag=DKM08_RS04700;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 911412 912812 . + . ID=gene-DKM08_RS04705;Name=DKM08_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04705;old_locus_tag=DKM08_04695 NZ_QFYX01000001.1 Protein Homology CDS 911412 912812 . + 0 ID=cds-WP_003898735.1;Parent=gene-DKM08_RS04705;Dbxref=GenBank:WP_003898735.1;Name=WP_003898735.1;Ontology_term=GO:0006006,GO:0004345;gbkey=CDS;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177789.1;locus_tag=DKM08_RS04705;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003898735.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 912834 913856 . + . ID=gene-DKM08_RS04710;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=DKM08_RS04710;old_locus_tag=DKM08_04700 NZ_QFYX01000001.1 Protein Homology CDS 912834 913856 . + 0 ID=cds-WP_003405880.1;Parent=gene-DKM08_RS04710;Dbxref=GenBank:WP_003405880.1;Name=WP_003405880.1;Ontology_term=GO:0006098,GO:0016616;gbkey=CDS;gene=gnd;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215638.1;locus_tag=DKM08_RS04710;product=phosphogluconate dehydrogenase (NAD(+)-dependent%2C decarboxylating);protein_id=WP_003405880.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 913849 914715 . - . ID=gene-DKM08_RS04715;Name=bpoB;gbkey=Gene;gene=bpoB;gene_biotype=protein_coding;locus_tag=DKM08_RS04715;old_locus_tag=DKM08_04705 NZ_QFYX01000001.1 Protein Homology CDS 913849 914715 . - 0 ID=cds-WP_003898736.1;Parent=gene-DKM08_RS04715;Dbxref=GenBank:WP_003898736.1;Name=WP_003898736.1;gbkey=CDS;gene=bpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898736.1;locus_tag=DKM08_RS04715;product=alpha/beta fold hydrolase;protein_id=WP_003898736.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 914877 915782 . + . ID=gene-DKM08_RS04720;Name=ephC;gbkey=Gene;gene=ephC;gene_biotype=protein_coding;locus_tag=DKM08_RS04720;old_locus_tag=DKM08_04710 NZ_QFYX01000001.1 Protein Homology CDS 914877 915782 . + 0 ID=cds-WP_003911402.1;Parent=gene-DKM08_RS04720;Dbxref=GenBank:WP_003911402.1;Name=WP_003911402.1;gbkey=CDS;gene=ephC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911402.1;locus_tag=DKM08_RS04720;product=alpha/beta fold hydrolase;protein_id=WP_003911402.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 915787 917031 . + . ID=gene-DKM08_RS04725;Name=DKM08_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04725;old_locus_tag=DKM08_04715 NZ_QFYX01000001.1 Protein Homology CDS 915787 917031 . + 0 ID=cds-WP_003901095.1;Parent=gene-DKM08_RS04725;Dbxref=GenBank:WP_003901095.1;Name=WP_003901095.1;Ontology_term=GO:0004144;gbkey=CDS;go_function=diacylglycerol O-acyltransferase activity|0004144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215641.1;locus_tag=DKM08_RS04725;product=WS/DGAT domain-containing protein;protein_id=WP_003901095.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 917035 917640 . - . ID=gene-DKM08_RS04730;Name=DKM08_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04730;old_locus_tag=DKM08_04720 NZ_QFYX01000001.1 Protein Homology CDS 917035 917640 . - 0 ID=cds-WP_003405892.1;Parent=gene-DKM08_RS04730;Dbxref=GenBank:WP_003405892.1;Name=WP_003405892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215642.1;locus_tag=DKM08_RS04730;product=hypothetical protein;protein_id=WP_003405892.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 917637 919109 . - . ID=gene-DKM08_RS04735;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=DKM08_RS04735;old_locus_tag=DKM08_04725 NZ_QFYX01000001.1 Protein Homology CDS 917637 919109 . - 0 ID=cds-WP_003903329.1;Parent=gene-DKM08_RS04735;Dbxref=GenBank:WP_003903329.1;Name=WP_003903329.1;gbkey=CDS;gene=ppdK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215643.1;locus_tag=DKM08_RS04735;product=pyruvate%2C phosphate dikinase;protein_id=WP_003903329.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 919322 920677 . - . ID=gene-DKM08_RS04740;Name=DKM08_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04740;old_locus_tag=DKM08_04730 NZ_QFYX01000001.1 Protein Homology CDS 919322 920677 . - 0 ID=cds-WP_003405897.1;Parent=gene-DKM08_RS04740;Dbxref=GenBank:WP_003405897.1;Name=WP_003405897.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292706.1;locus_tag=DKM08_RS04740;product=HNH endonuclease signature motif containing protein;protein_id=WP_003405897.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 920779 922239 . - . ID=gene-DKM08_RS04745;Name=DKM08_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04745;old_locus_tag=DKM08_04735 NZ_QFYX01000001.1 Protein Homology CDS 920779 922239 . - 0 ID=cds-WP_003405904.1;Parent=gene-DKM08_RS04745;Dbxref=GenBank:WP_003405904.1;Name=WP_003405904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215645.1;locus_tag=DKM08_RS04745;product=short-chain fatty acyl-CoA regulator family protein;protein_id=WP_003405904.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 922335 923840 . + . ID=gene-DKM08_RS04750;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=DKM08_RS04750;old_locus_tag=DKM08_04740 NZ_QFYX01000001.1 Protein Homology CDS 922335 923840 . + 0 ID=cds-WP_003405907.1;Parent=gene-DKM08_RS04750;Dbxref=GenBank:WP_003405907.1;Name=WP_003405907.1;Ontology_term=GO:0047547;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288002.1;locus_tag=DKM08_RS04750;product=2-methylcitrate dehydratase PrpD;protein_id=WP_003405907.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 923837 925018 . + . ID=gene-DKM08_RS04755;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=DKM08_RS04755;old_locus_tag=DKM08_04745 NZ_QFYX01000001.1 Protein Homology CDS 923837 925018 . + 0 ID=cds-WP_003405909.1;Parent=gene-DKM08_RS04755;Dbxref=GenBank:WP_003405909.1;Name=WP_003405909.1;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215647.1;locus_tag=DKM08_RS04755;product=2-methylcitrate synthase;protein_id=WP_003405909.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 925030 926760 . + . ID=gene-DKM08_RS04760;Name=DKM08_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04760;old_locus_tag=DKM08_04750 NZ_QFYX01000001.1 Protein Homology CDS 925030 926760 . + 0 ID=cds-WP_003405912.1;Parent=gene-DKM08_RS04760;Dbxref=GenBank:WP_003405912.1;Name=WP_003405912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215648.1;locus_tag=DKM08_RS04760;product=DUF3556 domain-containing protein;protein_id=WP_003405912.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 926772 929051 . - . ID=gene-DKM08_RS04765;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=DKM08_RS04765;old_locus_tag=DKM08_04755 NZ_QFYX01000001.1 Protein Homology CDS 926772 929051 . - 0 ID=cds-WP_003405914.1;Parent=gene-DKM08_RS04765;Dbxref=GenBank:WP_003405914.1;Name=WP_003405914.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215649.1;locus_tag=DKM08_RS04765;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_003405914.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 929185 929420 . - . ID=id-NZ_QFYX01000001.1:929185..929420;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 929627 929863 . + . ID=gene-DKM08_RS04770;Name=DKM08_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04770;old_locus_tag=DKM08_04760 NZ_QFYX01000001.1 Protein Homology CDS 929627 929863 . + 0 ID=cds-WP_003405917.1;Parent=gene-DKM08_RS04770;Dbxref=GenBank:WP_003405917.1;Name=WP_003405917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215650.1;locus_tag=DKM08_RS04770;product=hypothetical protein;protein_id=WP_003405917.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 929977 931833 . - . ID=gene-DKM08_RS22665;Name=DKM08_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22665;old_locus_tag=DKM08_04765 NZ_QFYX01000001.1 Protein Homology CDS 929977 931833 . - 0 ID=cds-WP_003405919.1;Parent=gene-DKM08_RS22665;Dbxref=GenBank:WP_003405919.1;Name=WP_003405919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177790.1;locus_tag=DKM08_RS22665;product=PPE family protein;protein_id=WP_003405919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 932097 932261 . + . ID=gene-DKM08_RS04780;Name=DKM08_RS04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04780;old_locus_tag=DKM08_04770;partial=true;pseudo=true;start_range=.,932097 NZ_QFYX01000001.1 Protein Homology CDS 932097 932261 . + 0 ID=cds-DKM08_RS04780;Parent=gene-DKM08_RS04780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920476.1;locus_tag=DKM08_RS04780;partial=true;product=acetyl-CoA acetyltransferase;pseudo=true;start_range=.,932097;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 932311 932981 . + . ID=gene-DKM08_RS21525;Name=DKM08_RS21525;end_range=932981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21525;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 932311 932981 . + 0 ID=cds-DKM08_RS21525;Parent=gene-DKM08_RS21525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=932981,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005147140.1;locus_tag=DKM08_RS21525;partial=true;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 933177 934193 . - . ID=gene-DKM08_RS04795;Name=DKM08_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04795;old_locus_tag=DKM08_04785 NZ_QFYX01000001.1 Protein Homology CDS 933177 934193 . - 0 ID=cds-WP_003405932.1;Parent=gene-DKM08_RS04795;Dbxref=GenBank:WP_003405932.1;Name=WP_003405932.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215654.1;locus_tag=DKM08_RS04795;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003405932.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 934190 934690 . - . ID=gene-DKM08_RS04800;Name=DKM08_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04800;old_locus_tag=DKM08_04790 NZ_QFYX01000001.1 Protein Homology CDS 934190 934690 . - 0 ID=cds-WP_003405935.1;Parent=gene-DKM08_RS04800;Dbxref=GenBank:WP_003405935.1;Name=WP_003405935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215655.1;locus_tag=DKM08_RS04800;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_003405935.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 935178 935900 . + . ID=gene-DKM08_RS04810;Name=DKM08_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04810;old_locus_tag=DKM08_04800 NZ_QFYX01000001.1 Protein Homology CDS 935178 935900 . + 0 ID=cds-WP_003911379.1;Parent=gene-DKM08_RS04810;Dbxref=GenBank:WP_003911379.1;Name=WP_003911379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724051.1;locus_tag=DKM08_RS04810;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003911379.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 935908 936714 . - . ID=gene-DKM08_RS04815;Name=DKM08_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04815;old_locus_tag=DKM08_04805 NZ_QFYX01000001.1 Protein Homology CDS 935908 936714 . - 0 ID=cds-WP_003405951.1;Parent=gene-DKM08_RS04815;Dbxref=GenBank:WP_003405951.1;Name=WP_003405951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215657.1;locus_tag=DKM08_RS04815;product=enoyl-CoA hydratase;protein_id=WP_003405951.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 936857 937663 . - . ID=gene-DKM08_RS04820;Name=DKM08_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04820;old_locus_tag=DKM08_04810 NZ_QFYX01000001.1 Protein Homology CDS 936857 937663 . - 0 ID=cds-WP_003405957.1;Parent=gene-DKM08_RS04820;Dbxref=GenBank:WP_003405957.1;Name=WP_003405957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215658.1;locus_tag=DKM08_RS04820;product=enoyl-CoA hydratase;protein_id=WP_003405957.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 937767 938849 . + . ID=gene-DKM08_RS04825;Name=mcr;gbkey=Gene;gene=mcr;gene_biotype=protein_coding;locus_tag=DKM08_RS04825;old_locus_tag=DKM08_04815 NZ_QFYX01000001.1 Protein Homology CDS 937767 938849 . + 0 ID=cds-WP_003898740.1;Parent=gene-DKM08_RS04825;Dbxref=GenBank:WP_003898740.1;Name=WP_003898740.1;gbkey=CDS;gene=mcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215659.1;locus_tag=DKM08_RS04825;product=alpha-methylacyl-CoA racemase;protein_id=WP_003898740.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 938861 939613 . + . ID=gene-DKM08_RS04830;Name=DKM08_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04830;old_locus_tag=DKM08_04820 NZ_QFYX01000001.1 Protein Homology CDS 938861 939613 . + 0 ID=cds-WP_023349487.1;Parent=gene-DKM08_RS04830;Dbxref=GenBank:WP_023349487.1;Name=WP_023349487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215660.1;locus_tag=DKM08_RS04830;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_023349487.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 939741 939872 . - . ID=gene-DKM08_RS22405;Name=DKM08_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22405;old_locus_tag=DKM08_04825 NZ_QFYX01000001.1 Protein Homology CDS 939741 939872 . - 0 ID=cds-WP_003405966.1;Parent=gene-DKM08_RS22405;Dbxref=GenBank:WP_003405966.1;Name=WP_003405966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405966.1;locus_tag=DKM08_RS22405;product=hypothetical protein;protein_id=WP_003405966.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 940128 942473 . + . ID=gene-DKM08_RS04845;Name=DKM08_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04845;old_locus_tag=DKM08_04835 NZ_QFYX01000001.1 Protein Homology CDS 940128 942473 . + 0 ID=cds-WP_003405970.1;Parent=gene-DKM08_RS04845;Dbxref=GenBank:WP_003405970.1;Name=WP_003405970.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629850.1;locus_tag=DKM08_RS04845;product=MMPL family transporter;protein_id=WP_003405970.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 942606 943256 . + . ID=gene-DKM08_RS04850;Name=DKM08_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04850;old_locus_tag=DKM08_04840 NZ_QFYX01000001.1 Protein Homology CDS 942606 943256 . + 0 ID=cds-WP_003405982.1;Parent=gene-DKM08_RS04850;Dbxref=GenBank:WP_003405982.1;Name=WP_003405982.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215663.1;locus_tag=DKM08_RS04850;product=methyltransferase domain-containing protein;protein_id=WP_003405982.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 943631 943732 . + . ID=gene-DKM08_RS22025;Name=DKM08_RS22025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22025;partial=true;pseudo=true;start_range=.,943631 NZ_QFYX01000001.1 Protein Homology CDS 943631 943732 . + 0 ID=cds-DKM08_RS22025;Parent=gene-DKM08_RS22025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=DKM08_RS22025;partial=true;product=hypothetical protein;pseudo=true;start_range=.,943631;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 943734 944009 . - . ID=gene-DKM08_RS22030;Name=DKM08_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22030;old_locus_tag=DKM08_04850 NZ_QFYX01000001.1 Protein Homology CDS 943734 944009 . - 0 ID=cds-WP_003405990.1;Parent=gene-DKM08_RS22030;Dbxref=GenBank:WP_003405990.1;Name=WP_003405990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405990.1;locus_tag=DKM08_RS22030;product=hypothetical protein;protein_id=WP_003405990.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 944006 945370 . - . ID=gene-DKM08_RS04865;Name=DKM08_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04865;old_locus_tag=DKM08_04855 NZ_QFYX01000001.1 Protein Homology CDS 944006 945370 . - 0 ID=cds-WP_009939811.1;Parent=gene-DKM08_RS04865;Dbxref=GenBank:WP_009939811.1;Name=WP_009939811.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=DKM08_RS04865;product=HNH endonuclease signature motif containing protein;protein_id=WP_009939811.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 945599 946526 . + . ID=gene-DKM08_RS04870;Name=DKM08_RS04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS04870;old_locus_tag=DKM08_04860;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 945599 946526 . + 0 ID=cds-DKM08_RS04870;Parent=gene-DKM08_RS04870;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=DKM08_RS04870;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 946610 947323 . - . ID=gene-DKM08_RS04875;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=DKM08_RS04875;old_locus_tag=DKM08_04865 NZ_QFYX01000001.1 Protein Homology CDS 946610 947323 . - 0 ID=cds-WP_003406044.1;Parent=gene-DKM08_RS04875;Dbxref=GenBank:WP_003406044.1;Name=WP_003406044.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215667.1;locus_tag=DKM08_RS04875;product=NAD-dependent protein deacylase;protein_id=WP_003406044.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 947361 947726 . + . ID=gene-DKM08_RS04880;Name=DKM08_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04880;old_locus_tag=DKM08_04870 NZ_QFYX01000001.1 Protein Homology CDS 947361 947726 . + 0 ID=cds-WP_003406047.1;Parent=gene-DKM08_RS04880;Dbxref=GenBank:WP_003406047.1;Name=WP_003406047.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215668.1;locus_tag=DKM08_RS04880;product=GntR family transcriptional regulator;protein_id=WP_003406047.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 947704 948552 . - . ID=gene-DKM08_RS04885;Name=omt;gbkey=Gene;gene=omt;gene_biotype=protein_coding;locus_tag=DKM08_RS04885;old_locus_tag=DKM08_04875 NZ_QFYX01000001.1 Protein Homology CDS 947704 948552 . - 0 ID=cds-WP_010950498.1;Parent=gene-DKM08_RS04885;Dbxref=GenBank:WP_010950498.1;Name=WP_010950498.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=omt;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215669.1;locus_tag=DKM08_RS04885;product=class I SAM-dependent methyltransferase;protein_id=WP_010950498.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 948549 949079 . - . ID=gene-DKM08_RS04890;Name=DKM08_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04890;old_locus_tag=DKM08_04880 NZ_QFYX01000001.1 Protein Homology CDS 948549 949079 . - 0 ID=cds-WP_023637376.1;Parent=gene-DKM08_RS04890;Dbxref=GenBank:WP_023637376.1;Name=WP_023637376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012395864.1;locus_tag=DKM08_RS04890;product=DUF1697 domain-containing protein;protein_id=WP_023637376.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 949135 949578 . + . ID=gene-DKM08_RS04895;Name=DKM08_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04895;old_locus_tag=DKM08_04885 NZ_QFYX01000001.1 Protein Homology CDS 949135 949578 . + 0 ID=cds-WP_003406060.1;Parent=gene-DKM08_RS04895;Dbxref=GenBank:WP_003406060.1;Name=WP_003406060.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215671.1;locus_tag=DKM08_RS04895;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003406060.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 949736 949924 . + . ID=gene-DKM08_RS04900;Name=DKM08_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04900;old_locus_tag=DKM08_04890 NZ_QFYX01000001.1 Protein Homology CDS 949736 949924 . + 0 ID=cds-WP_003406063.1;Parent=gene-DKM08_RS04900;Dbxref=GenBank:WP_003406063.1;Name=WP_003406063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030031.1;locus_tag=DKM08_RS04900;product=DUF5302 domain-containing protein;protein_id=WP_003406063.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 950012 950599 . + . ID=gene-DKM08_RS04905;Name=DKM08_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04905;old_locus_tag=DKM08_04895 NZ_QFYX01000001.1 Protein Homology CDS 950012 950599 . + 0 ID=cds-WP_003406064.1;Parent=gene-DKM08_RS04905;Dbxref=GenBank:WP_003406064.1;Name=WP_003406064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215672.1;locus_tag=DKM08_RS04905;product=HhH-GPD-type base excision DNA repair protein;protein_id=WP_003406064.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 950596 950742 . + . ID=gene-DKM08_RS04910;Name=DKM08_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04910;old_locus_tag=DKM08_04900 NZ_QFYX01000001.1 Protein Homology CDS 950596 950742 . + 0 ID=cds-WP_003406065.1;Parent=gene-DKM08_RS04910;Dbxref=GenBank:WP_003406065.1;Name=WP_003406065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169078.1;locus_tag=DKM08_RS04910;product=hypothetical protein;protein_id=WP_003406065.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 950762 951877 . - . ID=gene-DKM08_RS04915;Name=DKM08_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04915;old_locus_tag=DKM08_04905 NZ_QFYX01000001.1 Protein Homology CDS 950762 951877 . - 0 ID=cds-WP_003406066.1;Parent=gene-DKM08_RS04915;Dbxref=GenBank:WP_003406066.1;Name=WP_003406066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215673.1;locus_tag=DKM08_RS04915;product=hypothetical protein;protein_id=WP_003406066.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 951885 952568 . - . ID=gene-DKM08_RS04920;Name=DKM08_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04920;old_locus_tag=DKM08_04910 NZ_QFYX01000001.1 Protein Homology CDS 951885 952568 . - 0 ID=cds-WP_003406075.1;Parent=gene-DKM08_RS04920;Dbxref=GenBank:WP_003406075.1;Name=WP_003406075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215674.1;locus_tag=DKM08_RS04920;product=hypothetical protein;protein_id=WP_003406075.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 952698 953993 . + . ID=gene-DKM08_RS04925;Name=pimE;gbkey=Gene;gene=pimE;gene_biotype=protein_coding;locus_tag=DKM08_RS04925;old_locus_tag=DKM08_04915 NZ_QFYX01000001.1 Protein Homology CDS 952698 953993 . + 0 ID=cds-WP_003900282.1;Parent=gene-DKM08_RS04925;Dbxref=GenBank:WP_003900282.1;Name=WP_003900282.1;gbkey=CDS;gene=pimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215675.1;locus_tag=DKM08_RS04925;product=mannosyltransferase;protein_id=WP_003900282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 953990 954274 . - . ID=gene-DKM08_RS04930;Name=DKM08_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04930;old_locus_tag=DKM08_04920 NZ_QFYX01000001.1 Protein Homology CDS 953990 954274 . - 0 ID=cds-WP_003406082.1;Parent=gene-DKM08_RS04930;Dbxref=GenBank:WP_003406082.1;Name=WP_003406082.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177641.1;locus_tag=DKM08_RS04930;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003406082.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 954301 954726 . + . ID=gene-DKM08_RS04935;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=DKM08_RS04935;old_locus_tag=DKM08_04925 NZ_QFYX01000001.1 Protein Homology CDS 954301 954726 . + 0 ID=cds-WP_014000643.1;Parent=gene-DKM08_RS04935;Dbxref=GenBank:WP_014000643.1;Name=WP_014000643.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215676.1;locus_tag=DKM08_RS04935;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_014000643.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 955034 958732 . + . ID=gene-DKM08_RS04940;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=DKM08_RS04940;old_locus_tag=DKM08_04930 NZ_QFYX01000001.1 Protein Homology CDS 955034 958732 . + 0 ID=cds-WP_010950499.1;Parent=gene-DKM08_RS04940;Dbxref=GenBank:WP_010950499.1;Name=WP_010950499.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215677.1;locus_tag=DKM08_RS04940;product=nitrate reductase subunit alpha;protein_id=WP_010950499.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 958771 960447 . + . ID=gene-DKM08_RS04945;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=DKM08_RS04945;old_locus_tag=DKM08_04935 NZ_QFYX01000001.1 Protein Homology CDS 958771 960447 . + 0 ID=cds-WP_003406090.1;Parent=gene-DKM08_RS04945;Dbxref=GenBank:WP_003406090.1;Name=WP_003406090.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898749.1;locus_tag=DKM08_RS04945;product=nitrate reductase subunit beta;protein_id=WP_003406090.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 960444 961109 . + . ID=gene-DKM08_RS04950;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=DKM08_RS04950;old_locus_tag=DKM08_04940 NZ_QFYX01000001.1 Protein Homology CDS 960444 961109 . + 0 ID=cds-WP_003911426.1;Parent=gene-DKM08_RS04950;Dbxref=GenBank:WP_003911426.1;Name=WP_003911426.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911426.1;locus_tag=DKM08_RS04950;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_003911426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 961112 961852 . + . ID=gene-DKM08_RS04955;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=DKM08_RS04955;old_locus_tag=DKM08_04945 NZ_QFYX01000001.1 Protein Homology CDS 961112 961852 . + 0 ID=cds-WP_010950500.1;Parent=gene-DKM08_RS04955;Dbxref=GenBank:WP_010950500.1;Name=WP_010950500.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215680.1;locus_tag=DKM08_RS04955;product=respiratory nitrate reductase subunit gamma;protein_id=WP_010950500.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 961874 963760 . + . ID=gene-DKM08_RS04960;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=DKM08_RS04960;old_locus_tag=DKM08_04950 NZ_QFYX01000001.1 Protein Homology CDS 961874 963760 . + 0 ID=cds-WP_003406099.1;Parent=gene-DKM08_RS04960;Dbxref=GenBank:WP_003406099.1;Name=WP_003406099.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215681.1;locus_tag=DKM08_RS04960;product=translational GTPase TypA;protein_id=WP_003406099.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 963858 965765 . + . ID=gene-DKM08_RS04965;Name=lpqW;gbkey=Gene;gene=lpqW;gene_biotype=protein_coding;locus_tag=DKM08_RS04965;old_locus_tag=DKM08_04955 NZ_QFYX01000001.1 Protein Homology CDS 963858 965765 . + 0 ID=cds-WP_003406102.1;Parent=gene-DKM08_RS04965;Dbxref=GenBank:WP_003406102.1;Name=WP_003406102.1;gbkey=CDS;gene=lpqW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215682.1;locus_tag=DKM08_RS04965;product=lipoarabinomannan biosynthesis protein LpqW;protein_id=WP_003406102.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 965793 966398 . - . ID=gene-DKM08_RS04970;Name=DKM08_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04970;old_locus_tag=DKM08_04960 NZ_QFYX01000001.1 Protein Homology CDS 965793 966398 . - 0 ID=cds-WP_003406104.1;Parent=gene-DKM08_RS04970;Dbxref=GenBank:WP_003406104.1;Name=WP_003406104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215683.1;locus_tag=DKM08_RS04970;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406104.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 966470 967511 . - . ID=gene-DKM08_RS21530;Name=DKM08_RS21530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21530;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 966470 967511 . - 0 ID=cds-DKM08_RS21530;Parent=gene-DKM08_RS21530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177791.1;locus_tag=DKM08_RS21530;product=PPE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 967529 967831 . - . ID=gene-DKM08_RS04985;Name=lipX;gbkey=Gene;gene=lipX;gene_biotype=protein_coding;gene_synonym=PE11;locus_tag=DKM08_RS04985;old_locus_tag=DKM08_04975 NZ_QFYX01000001.1 Protein Homology CDS 967529 967831 . - 0 ID=cds-WP_003898752.1;Parent=gene-DKM08_RS04985;Dbxref=GenBank:WP_003898752.1;Name=WP_003898752.1;gbkey=CDS;gene=lipX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177792.1;locus_tag=DKM08_RS04985;product=lipase/esterase LipX;protein_id=WP_003898752.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 968011 968922 . + . ID=gene-DKM08_RS04990;Name=mshB;gbkey=Gene;gene=mshB;gene_biotype=protein_coding;locus_tag=DKM08_RS04990;old_locus_tag=DKM08_04980 NZ_QFYX01000001.1 Protein Homology CDS 968011 968922 . + 0 ID=cds-WP_003406154.1;Parent=gene-DKM08_RS04990;Dbxref=GenBank:WP_003406154.1;Name=WP_003406154.1;Ontology_term=GO:0010125,GO:0035595;gbkey=CDS;gene=mshB;go_function=N-acetylglucosaminylinositol deacetylase activity|0035595||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215686.1;locus_tag=DKM08_RS04990;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=WP_003406154.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 969014 969454 . + . ID=gene-DKM08_RS04995;Name=DKM08_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS04995;old_locus_tag=DKM08_04985 NZ_QFYX01000001.1 Protein Homology CDS 969014 969454 . + 0 ID=cds-WP_003406163.1;Parent=gene-DKM08_RS04995;Dbxref=GenBank:WP_003406163.1;Name=WP_003406163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215687.2;locus_tag=DKM08_RS04995;product=hypothetical protein;protein_id=WP_003406163.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 969462 970388 . - . ID=gene-DKM08_RS05000;Name=DKM08_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05000;old_locus_tag=DKM08_04990 NZ_QFYX01000001.1 Protein Homology CDS 969462 970388 . - 0 ID=cds-WP_003406165.1;Parent=gene-DKM08_RS05000;Dbxref=GenBank:WP_003406165.1;Name=WP_003406165.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177793.1;locus_tag=DKM08_RS05000;product=PE family protein;protein_id=WP_003406165.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 970638 973208 . + . ID=gene-DKM08_RS05005;Name=fbiC;gbkey=Gene;gene=fbiC;gene_biotype=protein_coding;locus_tag=DKM08_RS05005;old_locus_tag=DKM08_04995 NZ_QFYX01000001.1 Protein Homology CDS 970638 973208 . + 0 ID=cds-WP_003406167.1;Parent=gene-DKM08_RS05005;Dbxref=GenBank:WP_003406167.1;Name=WP_003406167.1;Ontology_term=GO:0016765,GO:0051539;gbkey=CDS;gene=fbiC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215689.1;locus_tag=DKM08_RS05005;product=bifunctional FO biosynthesis protein CofGH;protein_id=WP_003406167.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 973314 973646 . - . ID=gene-DKM08_RS05010;Name=DKM08_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05010;old_locus_tag=DKM08_05000 NZ_QFYX01000001.1 Protein Homology CDS 973314 973646 . - 0 ID=cds-WP_003406169.1;Parent=gene-DKM08_RS05010;Dbxref=GenBank:WP_003406169.1;Name=WP_003406169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215690.1;locus_tag=DKM08_RS05010;product=hemophore-related protein;protein_id=WP_003406169.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 973847 975871 . - . ID=gene-DKM08_RS05015;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=DKM08_RS05015;old_locus_tag=DKM08_05005 NZ_QFYX01000001.1 Protein Homology CDS 973847 975871 . - 0 ID=cds-WP_023349489.1;Parent=gene-DKM08_RS05015;Dbxref=GenBank:WP_023349489.1;Name=WP_023349489.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fadH;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215691.1;locus_tag=DKM08_RS05015;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_023349489.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 975868 976437 . - . ID=gene-DKM08_RS05020;Name=DKM08_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05020;old_locus_tag=DKM08_05010 NZ_QFYX01000001.1 Protein Homology CDS 975868 976437 . - 0 ID=cds-WP_003406182.1;Parent=gene-DKM08_RS05020;Dbxref=GenBank:WP_003406182.1;Name=WP_003406182.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215692.1;locus_tag=DKM08_RS05020;product=PadR family transcriptional regulator;protein_id=WP_003406182.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 976650 976976 . + . ID=gene-DKM08_RS05025;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=DKM08_RS05025;old_locus_tag=DKM08_05015 NZ_QFYX01000001.1 Protein Homology CDS 976650 976976 . + 0 ID=cds-WP_003406185.1;Parent=gene-DKM08_RS05025;Dbxref=GenBank:WP_003406185.1;Name=WP_003406185.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215693.1;locus_tag=DKM08_RS05025;product=ferredoxin;protein_id=WP_003406185.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 977009 978097 . + . ID=gene-DKM08_RS05030;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=DKM08_RS05030;old_locus_tag=DKM08_05020 NZ_QFYX01000001.1 Protein Homology CDS 977009 978097 . + 0 ID=cds-WP_003903345.1;Parent=gene-DKM08_RS05030;Dbxref=GenBank:WP_003903345.1;Name=WP_003903345.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215694.1;locus_tag=DKM08_RS05030;product=succinyldiaminopimelate transaminase;protein_id=WP_003903345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 978125 980944 . - . ID=gene-DKM08_RS05035;Name=DKM08_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05035;old_locus_tag=DKM08_05025 NZ_QFYX01000001.1 Protein Homology CDS 978125 980944 . - 0 ID=cds-WP_003406189.1;Parent=gene-DKM08_RS05035;Dbxref=GenBank:WP_003406189.1;Name=WP_003406189.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215695.1;locus_tag=DKM08_RS05035;product=DEAD/DEAH box helicase family protein;protein_id=WP_003406189.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 981371 987628 . + . ID=gene-DKM08_RS05040;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=DKM08_RS05040;old_locus_tag=DKM08_05030 NZ_QFYX01000001.1 Protein Homology CDS 981371 987628 . + 0 ID=cds-WP_010950502.1;Parent=gene-DKM08_RS05040;Dbxref=GenBank:WP_010950502.1;Name=WP_010950502.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799162.1;locus_tag=DKM08_RS05040;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_010950502.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 987681 989099 . + . ID=gene-DKM08_RS05045;Name=papA3;gbkey=Gene;gene=papA3;gene_biotype=protein_coding;locus_tag=DKM08_RS05045;old_locus_tag=DKM08_05035 NZ_QFYX01000001.1 Protein Homology CDS 987681 989099 . + 0 ID=cds-WP_003898759.1;Parent=gene-DKM08_RS05045;Dbxref=GenBank:WP_003898759.1;Name=WP_003898759.1;gbkey=CDS;gene=papA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215698.1;locus_tag=DKM08_RS05045;product=acyltransferase PapA3;protein_id=WP_003898759.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 989121 992174 . + . ID=gene-DKM08_RS05050;Name=mmpL10;gbkey=Gene;gene=mmpL10;gene_biotype=protein_coding;locus_tag=DKM08_RS05050;old_locus_tag=DKM08_05040 NZ_QFYX01000001.1 Protein Homology CDS 989121 992174 . + 0 ID=cds-WP_256381313.1;Parent=gene-DKM08_RS05050;Dbxref=GenBank:WP_256381313.1;Name=WP_256381313.1;gbkey=CDS;gene=mmpL10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003889070.1;locus_tag=DKM08_RS05050;product=RND transporter MmpL10;protein_id=WP_256381313.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 992178 993257 . - . ID=gene-DKM08_RS05055;Name=chp2;gbkey=Gene;gene=chp2;gene_biotype=protein_coding;locus_tag=DKM08_RS05055;old_locus_tag=DKM08_05045 NZ_QFYX01000001.1 Protein Homology CDS 992178 993257 . - 0 ID=cds-WP_003406195.1;Parent=gene-DKM08_RS05055;Dbxref=GenBank:WP_003406195.1;Name=WP_003406195.1;gbkey=CDS;gene=chp2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215700.1;locus_tag=DKM08_RS05055;product=diacyltrehalose acyltransferase Chp2;protein_id=WP_003406195.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 993422 995158 . - . ID=gene-DKM08_RS05060;Name=fadD21;gbkey=Gene;gene=fadD21;gene_biotype=protein_coding;locus_tag=DKM08_RS05060;old_locus_tag=DKM08_05050 NZ_QFYX01000001.1 Protein Homology CDS 993422 995158 . - 0 ID=cds-WP_003406196.1;Parent=gene-DKM08_RS05060;Dbxref=GenBank:WP_003406196.1;Name=WP_003406196.1;gbkey=CDS;gene=fadD21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215701.1;locus_tag=DKM08_RS05060;product=fatty-acid--AMP ligase FAAL21/FadD21;protein_id=WP_003406196.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 995335 996951 . - . ID=gene-DKM08_RS05065;Name=DKM08_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05065;old_locus_tag=DKM08_05055 NZ_QFYX01000001.1 Protein Homology CDS 995335 996951 . - 0 ID=cds-WP_003406197.1;Parent=gene-DKM08_RS05065;Dbxref=GenBank:WP_003406197.1;Name=WP_003406197.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215702.1;locus_tag=DKM08_RS05065;product=PucR family transcriptional regulator;protein_id=WP_003406197.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 997036 998667 . + . ID=gene-DKM08_RS05070;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=DKM08_RS05070;old_locus_tag=DKM08_05060 NZ_QFYX01000001.1 Protein Homology CDS 997036 998667 . + 0 ID=cds-WP_003900286.1;Parent=gene-DKM08_RS05070;Dbxref=GenBank:WP_003900286.1;Name=WP_003900286.1;Ontology_term=GO:0010133,GO:0003842;gbkey=CDS;gene=pruA;go_function=1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA;go_process=proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215703.1;locus_tag=DKM08_RS05070;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_003900286.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 998667 999656 . + . ID=gene-DKM08_RS05075;Name=DKM08_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05075;old_locus_tag=DKM08_05065 NZ_QFYX01000001.1 Protein Homology CDS 998667 999656 . + 0 ID=cds-WP_003900287.1;Parent=gene-DKM08_RS05075;Dbxref=GenBank:WP_003900287.1;Name=WP_003900287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215704.1;locus_tag=DKM08_RS05075;product=proline dehydrogenase family protein;protein_id=WP_003900287.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 999738 1000610 . + . ID=gene-DKM08_RS05080;Name=sigI;gbkey=Gene;gene=sigI;gene_biotype=protein_coding;locus_tag=DKM08_RS05080;old_locus_tag=DKM08_05070 NZ_QFYX01000001.1 Protein Homology CDS 999738 1000610 . + 0 ID=cds-WP_003406207.1;Parent=gene-DKM08_RS05080;Dbxref=GenBank:WP_003406207.1;Name=WP_003406207.1;gbkey=CDS;gene=sigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215705.1;locus_tag=DKM08_RS05080;product=RNA polymerase sigma factor SigI;protein_id=WP_003406207.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1000626 1001504 . + . ID=gene-DKM08_RS05085;Name=DKM08_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05085;old_locus_tag=DKM08_05075 NZ_QFYX01000001.1 Protein Homology CDS 1000626 1001504 . + 0 ID=cds-WP_003406212.1;Parent=gene-DKM08_RS05085;Dbxref=GenBank:WP_003406212.1;Name=WP_003406212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215706.1;locus_tag=DKM08_RS05085;product=alpha/beta fold hydrolase;protein_id=WP_003406212.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1001577 1002491 . + . ID=gene-DKM08_RS05090;Name=DKM08_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05090;old_locus_tag=DKM08_05080 NZ_QFYX01000001.1 Protein Homology CDS 1001577 1002491 . + 0 ID=cds-WP_003406215.1;Parent=gene-DKM08_RS05090;Dbxref=GenBank:WP_003406215.1;Name=WP_003406215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215707.1;locus_tag=DKM08_RS05090;product=alpha/beta fold hydrolase;protein_id=WP_003406215.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1002573 1003400 . + . ID=gene-DKM08_RS05095;Name=DKM08_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05095;old_locus_tag=DKM08_05085 NZ_QFYX01000001.1 Protein Homology CDS 1002573 1003400 . + 0 ID=cds-WP_003898763.1;Parent=gene-DKM08_RS05095;Dbxref=GenBank:WP_003898763.1;Name=WP_003898763.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215708.1;locus_tag=DKM08_RS05095;product=esterase/lipase family protein;protein_id=WP_003898763.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1003440 1004861 . + . ID=gene-DKM08_RS05100;Name=DKM08_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05100;old_locus_tag=DKM08_05090 NZ_QFYX01000001.1 Protein Homology CDS 1003440 1004861 . + 0 ID=cds-WP_003406218.1;Parent=gene-DKM08_RS05100;Dbxref=GenBank:WP_003406218.1;Name=WP_003406218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215709.1;locus_tag=DKM08_RS05100;product=acyl-CoA synthetase;protein_id=WP_003406218.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1004894 1006159 . - . ID=gene-DKM08_RS05105;Name=DKM08_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05105;old_locus_tag=DKM08_05095 NZ_QFYX01000001.1 Protein Homology CDS 1004894 1006159 . - 0 ID=cds-WP_023349490.1;Parent=gene-DKM08_RS05105;Dbxref=GenBank:WP_023349490.1;Name=WP_023349490.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215710.1;locus_tag=DKM08_RS05105;product=PucR family transcriptional regulator;protein_id=WP_023349490.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1006649 1006948 . + . ID=gene-DKM08_RS05115;Name=DKM08_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05115;old_locus_tag=DKM08_05105 NZ_QFYX01000001.1 Protein Homology CDS 1006649 1006948 . + 0 ID=cds-WP_003406222.1;Parent=gene-DKM08_RS05115;Dbxref=GenBank:WP_003406222.1;Name=WP_003406222.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177794.1;locus_tag=DKM08_RS05115;product=PE family protein;protein_id=WP_003406222.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1006995 1008182 . + . ID=gene-DKM08_RS05120;Name=DKM08_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05120;old_locus_tag=DKM08_05110 NZ_QFYX01000001.1 Protein Homology CDS 1006995 1008182 . + 0 ID=cds-WP_147020887.1;Parent=gene-DKM08_RS05120;Dbxref=GenBank:WP_147020887.1;Name=WP_147020887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177795.1;locus_tag=DKM08_RS05120;product=PPE family protein;protein_id=WP_147020887.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1008317 1008613 . + . ID=gene-DKM08_RS05125;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=DKM08_RS05125;old_locus_tag=DKM08_05115 NZ_QFYX01000001.1 Protein Homology CDS 1008317 1008613 . + 0 ID=cds-WP_003405345.1-2;Parent=gene-DKM08_RS05125;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=DKM08_RS05125;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1008664 1008948 . + . ID=gene-DKM08_RS05130;Name=esxL;gbkey=Gene;gene=esxL;gene_biotype=protein_coding;locus_tag=DKM08_RS05130;old_locus_tag=DKM08_05120 NZ_QFYX01000001.1 Protein Homology CDS 1008664 1008948 . + 0 ID=cds-WP_003421606.1;Parent=gene-DKM08_RS05130;Dbxref=GenBank:WP_003421606.1;Name=WP_003421606.1;gbkey=CDS;gene=esxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215714.1;locus_tag=DKM08_RS05130;product=type VII secretion system ESX-5 protein EsxL;protein_id=WP_003421606.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1009016 1010263 . - . ID=gene-DKM08_RS05135;Name=DKM08_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05135;old_locus_tag=DKM08_05125 NZ_QFYX01000001.1 Protein Homology CDS 1009016 1010263 . - 0 ID=cds-WP_003904572.1-2;Parent=gene-DKM08_RS05135;Dbxref=GenBank:WP_003904572.1;Name=WP_003904572.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=DKM08_RS05135;product=IS256-like element IS1081 family transposase;protein_id=WP_003904572.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1010600 1011877 . + . ID=gene-DKM08_RS05145;Name=DKM08_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05145;old_locus_tag=DKM08_05135 NZ_QFYX01000001.1 Protein Homology CDS 1010600 1011877 . + 0 ID=cds-WP_023349493.1;Parent=gene-DKM08_RS05145;Dbxref=GenBank:WP_023349493.1;Name=WP_023349493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215716.1;locus_tag=DKM08_RS05145;product=MHS family MFS transporter;protein_id=WP_023349493.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1011874 1012827 . - . ID=gene-DKM08_RS05150;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=DKM08_RS05150;old_locus_tag=DKM08_05140 NZ_QFYX01000001.1 Protein Homology CDS 1011874 1012827 . - 0 ID=cds-WP_003898768.1;Parent=gene-DKM08_RS05150;Dbxref=GenBank:WP_003898768.1;Name=WP_003898768.1;Ontology_term=GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215717.1;locus_tag=DKM08_RS05150;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_003898768.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1012918 1013982 . + . ID=gene-DKM08_RS05155;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=DKM08_RS05155;old_locus_tag=DKM08_05145 NZ_QFYX01000001.1 Protein Homology CDS 1012918 1013982 . + 0 ID=cds-WP_003406235.1;Parent=gene-DKM08_RS05155;Dbxref=GenBank:WP_003406235.1;Name=WP_003406235.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177796.1;locus_tag=DKM08_RS05155;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_003406235.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1013979 1016282 . - . ID=gene-DKM08_RS05165;Name=DKM08_RS05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS05165;old_locus_tag=DKM08_05155;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1013979 1016282 . - 0 ID=cds-DKM08_RS05165;Parent=gene-DKM08_RS05165;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289657.1;locus_tag=DKM08_RS05165;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1016377 1016940 . + . ID=gene-DKM08_RS05170;Name=DKM08_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05170;old_locus_tag=DKM08_05160 NZ_QFYX01000001.1 Protein Homology CDS 1016377 1016940 . + 0 ID=cds-WP_003898770.1;Parent=gene-DKM08_RS05170;Dbxref=GenBank:WP_003898770.1;Name=WP_003898770.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215721.1;locus_tag=DKM08_RS05170;product=TIGR00730 family Rossman fold protein;protein_id=WP_003898770.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1016990 1018783 . + . ID=gene-DKM08_RS05175;Name=fadD6;gbkey=Gene;gene=fadD6;gene_biotype=protein_coding;locus_tag=DKM08_RS05175;old_locus_tag=DKM08_05165 NZ_QFYX01000001.1 Protein Homology CDS 1016990 1018783 . + 0 ID=cds-WP_003406240.1;Parent=gene-DKM08_RS05175;Dbxref=GenBank:WP_003406240.1;Name=WP_003406240.1;gbkey=CDS;gene=fadD6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215722.1;locus_tag=DKM08_RS05175;product=long-chain-acyl-CoA synthetase FadD6;protein_id=WP_003406240.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1018849 1019805 . + . ID=gene-DKM08_RS05180;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=DKM08_RS05180;old_locus_tag=DKM08_05170 NZ_QFYX01000001.1 Protein Homology CDS 1018849 1019805 . + 0 ID=cds-WP_023349494.1;Parent=gene-DKM08_RS05180;Dbxref=GenBank:WP_023349494.1;Name=WP_023349494.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215723.1;locus_tag=DKM08_RS05180;product=dihydropteroate synthase;protein_id=WP_023349494.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1019802 1020776 . + . ID=gene-DKM08_RS05185;Name=gpgS;gbkey=Gene;gene=gpgS;gene_biotype=protein_coding;locus_tag=DKM08_RS05185;old_locus_tag=DKM08_05175 NZ_QFYX01000001.1 Protein Homology CDS 1019802 1020776 . + 0 ID=cds-WP_003406242.1;Parent=gene-DKM08_RS05185;Dbxref=GenBank:WP_003406242.1;Name=WP_003406242.1;gbkey=CDS;gene=gpgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215724.1;locus_tag=DKM08_RS05185;product=glucosyl-3-phosphoglycerate synthase;protein_id=WP_003406242.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1020815 1021183 . + . ID=gene-DKM08_RS05190;Name=DKM08_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05190;old_locus_tag=DKM08_05180 NZ_QFYX01000001.1 Protein Homology CDS 1020815 1021183 . + 0 ID=cds-WP_003406243.1;Parent=gene-DKM08_RS05190;Dbxref=GenBank:WP_003406243.1;Name=WP_003406243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215725.1;locus_tag=DKM08_RS05190;product=DivIVA domain-containing protein;protein_id=WP_003406243.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1021180 1021794 . + . ID=gene-DKM08_RS05195;Name=tagA;gbkey=Gene;gene=tagA;gene_biotype=protein_coding;locus_tag=DKM08_RS05195;old_locus_tag=DKM08_05185 NZ_QFYX01000001.1 Protein Homology CDS 1021180 1021794 . + 0 ID=cds-WP_003406244.1;Parent=gene-DKM08_RS05195;Dbxref=GenBank:WP_003406244.1;Name=WP_003406244.1;gbkey=CDS;gene=tagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215726.1;locus_tag=DKM08_RS05195;product=DNA-3-methyladenine glycosylase I;protein_id=WP_003406244.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1021961 1022128 . + . ID=gene-DKM08_RS05200;Name=DKM08_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05200;old_locus_tag=DKM08_05190 NZ_QFYX01000001.1 Protein Homology CDS 1021961 1022128 . + 0 ID=cds-WP_003406247.1;Parent=gene-DKM08_RS05200;Dbxref=GenBank:WP_003406247.1;Name=WP_003406247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003945169.1;locus_tag=DKM08_RS05200;product=DUF3117 domain-containing protein;protein_id=WP_003406247.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1022156 1023319 . - . ID=gene-DKM08_RS05205;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=DKM08_RS05205;old_locus_tag=DKM08_05195 NZ_QFYX01000001.1 Protein Homology CDS 1022156 1023319 . - 0 ID=cds-WP_003406248.1;Parent=gene-DKM08_RS05205;Dbxref=GenBank:WP_003406248.1;Name=WP_003406248.1;Ontology_term=GO:0009250,GO:0004373,GO:0016740;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA,transferase activity|0016740||IEA;go_process=glucan biosynthetic process|0009250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215728.1;locus_tag=DKM08_RS05205;product=glycogen synthase;protein_id=WP_003406248.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1023494 1024708 . + . ID=gene-DKM08_RS05210;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=DKM08_RS05210;old_locus_tag=DKM08_05200 NZ_QFYX01000001.1 Protein Homology CDS 1023494 1024708 . + 0 ID=cds-WP_003406249.1;Parent=gene-DKM08_RS05210;Dbxref=GenBank:WP_003406249.1;Name=WP_003406249.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011781656.1;locus_tag=DKM08_RS05210;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_003406249.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1024807 1025322 . - . ID=gene-DKM08_RS21830;Name=DKM08_RS21830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21830;old_locus_tag=DKM08_05205;partial=true;pseudo=true;start_range=.,1024807 NZ_QFYX01000001.1 Protein Homology CDS 1024807 1025322 . - 0 ID=cds-DKM08_RS21830;Parent=gene-DKM08_RS21830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799154.1;locus_tag=DKM08_RS21830;partial=true;product=PE family protein;pseudo=true;start_range=.,1024807;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1025417 1027102 . - . ID=gene-DKM08_RS05220;Name=DKM08_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05220;old_locus_tag=DKM08_05210 NZ_QFYX01000001.1 Protein Homology CDS 1025417 1027102 . - 0 ID=cds-WP_003904576.1;Parent=gene-DKM08_RS05220;Dbxref=GenBank:WP_003904576.1;Name=WP_003904576.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215731.1;locus_tag=DKM08_RS05220;product=CocE/NonD family hydrolase;protein_id=WP_003904576.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1027130 1027804 . - . ID=gene-DKM08_RS05225;Name=DKM08_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05225;old_locus_tag=DKM08_05215 NZ_QFYX01000001.1 Protein Homology CDS 1027130 1027804 . - 0 ID=cds-WP_003406252.1;Parent=gene-DKM08_RS05225;Dbxref=GenBank:WP_003406252.1;Name=WP_003406252.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215732.1;locus_tag=DKM08_RS05225;product=methyltransferase family protein;protein_id=WP_003406252.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1027813 1029459 . - . ID=gene-DKM08_RS05230;Name=DKM08_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05230;old_locus_tag=DKM08_05220 NZ_QFYX01000001.1 Protein Homology CDS 1027813 1029459 . - 0 ID=cds-WP_010950505.1;Parent=gene-DKM08_RS05230;Dbxref=GenBank:WP_010950505.1;Name=WP_010950505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215733.1;locus_tag=DKM08_RS05230;product=multidrug efflux ABC transporter permease;protein_id=WP_010950505.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1029456 1030391 . - . ID=gene-DKM08_RS05235;Name=DKM08_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05235;old_locus_tag=DKM08_05225 NZ_QFYX01000001.1 Protein Homology CDS 1029456 1030391 . - 0 ID=cds-WP_003900295.1;Parent=gene-DKM08_RS05235;Dbxref=GenBank:WP_003900295.1;Name=WP_003900295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215734.1;locus_tag=DKM08_RS05235;product=multidrug efflux ABC transporter ATP-binding protein;protein_id=WP_003900295.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1030381 1031019 . - . ID=gene-DKM08_RS05240;Name=raaS;gbkey=Gene;gene=raaS;gene_biotype=protein_coding;locus_tag=DKM08_RS05240;old_locus_tag=DKM08_05230 NZ_QFYX01000001.1 Protein Homology CDS 1030381 1031019 . - 0 ID=cds-WP_003406254.1;Parent=gene-DKM08_RS05240;Dbxref=GenBank:WP_003406254.1;Name=WP_003406254.1;gbkey=CDS;gene=raaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215735.1;locus_tag=DKM08_RS05240;product=transcriptional regulator RaaS;protein_id=WP_003406254.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1031161 1031808 . - . ID=gene-DKM08_RS05245;Name=DKM08_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05245;old_locus_tag=DKM08_05235 NZ_QFYX01000001.1 Protein Homology CDS 1031161 1031808 . - 0 ID=cds-WP_003406255.1;Parent=gene-DKM08_RS05245;Dbxref=GenBank:WP_003406255.1;Name=WP_003406255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406255.1;locus_tag=DKM08_RS05245;product=SAM-dependent O-methyltransferase;protein_id=WP_003406255.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1032071 1032844 . + . ID=gene-DKM08_RS05250;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=DKM08_RS05250;old_locus_tag=DKM08_05240 NZ_QFYX01000001.1 Protein Homology CDS 1032071 1032844 . + 0 ID=cds-WP_003406257.1;Parent=gene-DKM08_RS05250;Dbxref=GenBank:WP_003406257.1;Name=WP_003406257.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigE;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215737.1;locus_tag=DKM08_RS05250;product=RNA polymerase sigma factor SigE;protein_id=WP_003406257.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1033002 1033466 . + . ID=gene-DKM08_RS05260;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=DKM08_RS05260;old_locus_tag=DKM08_05250 NZ_QFYX01000001.1 Protein Homology CDS 1033002 1033466 . + 0 ID=cds-WP_003406258.1;Parent=gene-DKM08_RS05260;Dbxref=GenBank:WP_003406258.1;Name=WP_003406258.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215738.1;locus_tag=DKM08_RS05260;product=anti-sigma E factor RseA;protein_id=WP_003406258.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1033607 1035121 . + . ID=gene-DKM08_RS05265;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=DKM08_RS05265;old_locus_tag=DKM08_05255 NZ_QFYX01000001.1 Protein Homology CDS 1033607 1035121 . + 0 ID=cds-WP_031652189.1;Parent=gene-DKM08_RS05265;Dbxref=GenBank:WP_031652189.1;Name=WP_031652189.1;gbkey=CDS;gene=htrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912936.1;locus_tag=DKM08_RS05265;product=serine protease HtrA;protein_id=WP_031652189.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1035123 1035518 . + . ID=gene-DKM08_RS05270;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=DKM08_RS05270;old_locus_tag=DKM08_05260 NZ_QFYX01000001.1 Protein Homology CDS 1035123 1035518 . + 0 ID=cds-WP_003406260.1;Parent=gene-DKM08_RS05270;Dbxref=GenBank:WP_003406260.1;Name=WP_003406260.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215740.1;locus_tag=DKM08_RS05270;product=Sec-independent protein translocase protein TatB;protein_id=WP_003406260.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1035551 1036381 . - . ID=gene-DKM08_RS05275;Name=DKM08_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05275;old_locus_tag=DKM08_05265 NZ_QFYX01000001.1 Protein Homology CDS 1035551 1036381 . - 0 ID=cds-WP_003406261.1;Parent=gene-DKM08_RS05275;Dbxref=GenBank:WP_003406261.1;Name=WP_003406261.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215741.1;locus_tag=DKM08_RS05275;product=HAD-IIA family hydrolase;protein_id=WP_003406261.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1036492 1037955 . - . ID=gene-DKM08_RS05280;Name=DKM08_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05280;old_locus_tag=DKM08_05270 NZ_QFYX01000001.1 Protein Homology CDS 1036492 1037955 . - 0 ID=cds-WP_003406262.1;Parent=gene-DKM08_RS05280;Dbxref=GenBank:WP_003406262.1;Name=WP_003406262.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215742.1;locus_tag=DKM08_RS05280;product=PH domain-containing protein;protein_id=WP_003406262.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1037952 1038485 . - . ID=gene-DKM08_RS05285;Name=DKM08_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05285;old_locus_tag=DKM08_05275 NZ_QFYX01000001.1 Protein Homology CDS 1037952 1038485 . - 0 ID=cds-WP_003406264.1;Parent=gene-DKM08_RS05285;Dbxref=GenBank:WP_003406264.1;Name=WP_003406264.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215743.1;locus_tag=DKM08_RS05285;product=PH domain-containing protein;protein_id=WP_003406264.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1038580 1039137 . + . ID=gene-DKM08_RS05290;Name=DKM08_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05290;old_locus_tag=DKM08_05280 NZ_QFYX01000001.1 Protein Homology CDS 1038580 1039137 . + 0 ID=cds-WP_003406266.1;Parent=gene-DKM08_RS05290;Dbxref=GenBank:WP_003406266.1;Name=WP_003406266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215744.1;locus_tag=DKM08_RS05290;product=hypothetical protein;protein_id=WP_003406266.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1039189 1039362 . + . ID=gene-DKM08_RS05295;Name=DKM08_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05295;old_locus_tag=DKM08_05285 NZ_QFYX01000001.1 Protein Homology CDS 1039189 1039362 . + 0 ID=cds-WP_072516052.1;Parent=gene-DKM08_RS05295;Dbxref=GenBank:WP_072516052.1;Name=WP_072516052.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030032.1;locus_tag=DKM08_RS05295;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_072516052.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1039437 1040609 . - . ID=gene-DKM08_RS05300;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=DKM08_RS05300;old_locus_tag=DKM08_05290 NZ_QFYX01000001.1 Protein Homology CDS 1039437 1040609 . - 0 ID=cds-WP_003406273.1;Parent=gene-DKM08_RS05300;Dbxref=GenBank:WP_003406273.1;Name=WP_003406273.1;gbkey=CDS;gene=mrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215745.1;locus_tag=DKM08_RS05300;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_003406273.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1040622 1041857 . - . ID=gene-DKM08_RS05305;Name=DKM08_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05305;old_locus_tag=DKM08_05295 NZ_QFYX01000001.1 Protein Homology CDS 1040622 1041857 . - 0 ID=cds-WP_010950506.1;Parent=gene-DKM08_RS05305;Dbxref=GenBank:WP_010950506.1;Name=WP_010950506.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215746.1;locus_tag=DKM08_RS05305;product=lytic transglycosylase domain-containing protein;protein_id=WP_010950506.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1041982 1042524 . - . ID=gene-DKM08_RS05310;Name=DKM08_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05310;old_locus_tag=DKM08_05300 NZ_QFYX01000001.1 Protein Homology CDS 1041982 1042524 . - 0 ID=cds-WP_003406283.1;Parent=gene-DKM08_RS05310;Dbxref=GenBank:WP_003406283.1;Name=WP_003406283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215747.1;locus_tag=DKM08_RS05310;product=DUF1003 domain-containing protein;protein_id=WP_003406283.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1042521 1043828 . - . ID=gene-DKM08_RS05315;Name=DKM08_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05315;old_locus_tag=DKM08_05305 NZ_QFYX01000001.1 Protein Homology CDS 1042521 1043828 . - 0 ID=cds-WP_003406286.1;Parent=gene-DKM08_RS05315;Dbxref=GenBank:WP_003406286.1;Name=WP_003406286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215748.1;locus_tag=DKM08_RS05315;product=magnesium transporter;protein_id=WP_003406286.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1043890 1044486 . - . ID=gene-DKM08_RS05320;Name=DKM08_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05320;old_locus_tag=DKM08_05310 NZ_QFYX01000001.1 Protein Homology CDS 1043890 1044486 . - 0 ID=cds-WP_010950507.1;Parent=gene-DKM08_RS05320;Dbxref=GenBank:WP_010950507.1;Name=WP_010950507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215749.1;locus_tag=DKM08_RS05320;product=DUF4190 domain-containing protein;protein_id=WP_010950507.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1044636 1045163 . + . ID=gene-DKM08_RS05325;Name=DKM08_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05325;old_locus_tag=DKM08_05315 NZ_QFYX01000001.1 Protein Homology CDS 1044636 1045163 . + 0 ID=cds-WP_003406290.1;Parent=gene-DKM08_RS05325;Dbxref=GenBank:WP_003406290.1;Name=WP_003406290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215750.1;locus_tag=DKM08_RS05325;product=general stress protein;protein_id=WP_003406290.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1045184 1046590 . + . ID=gene-DKM08_RS05330;Name=lpqY;gbkey=Gene;gene=lpqY;gene_biotype=protein_coding;locus_tag=DKM08_RS05330;old_locus_tag=DKM08_05320 NZ_QFYX01000001.1 Protein Homology CDS 1045184 1046590 . + 0 ID=cds-WP_003898783.1;Parent=gene-DKM08_RS05330;Dbxref=GenBank:WP_003898783.1;Name=WP_003898783.1;gbkey=CDS;gene=lpqY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215751.1;locus_tag=DKM08_RS05330;product=trehalose ABC transporter substrate-binding protein LpqY;protein_id=WP_003898783.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1046587 1047510 . + . ID=gene-DKM08_RS05335;Name=sugA;gbkey=Gene;gene=sugA;gene_biotype=protein_coding;locus_tag=DKM08_RS05335;old_locus_tag=DKM08_05325 NZ_QFYX01000001.1 Protein Homology CDS 1046587 1047510 . + 0 ID=cds-WP_003406295.1;Parent=gene-DKM08_RS05335;Dbxref=GenBank:WP_003406295.1;Name=WP_003406295.1;gbkey=CDS;gene=sugA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215752.1;locus_tag=DKM08_RS05335;product=trehalose ABC transporter permease SugA;protein_id=WP_003406295.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1047515 1048339 . + . ID=gene-DKM08_RS05340;Name=sugB;gbkey=Gene;gene=sugB;gene_biotype=protein_coding;locus_tag=DKM08_RS05340;old_locus_tag=DKM08_05330 NZ_QFYX01000001.1 Protein Homology CDS 1047515 1048339 . + 0 ID=cds-WP_003900298.1;Parent=gene-DKM08_RS05340;Dbxref=GenBank:WP_003900298.1;Name=WP_003900298.1;gbkey=CDS;gene=sugB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215753.1;locus_tag=DKM08_RS05340;product=trehalose ABC transporter permease SugB;protein_id=WP_003900298.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1048344 1049525 . + . ID=gene-DKM08_RS05345;Name=sugC;gbkey=Gene;gene=sugC;gene_biotype=protein_coding;locus_tag=DKM08_RS05345;old_locus_tag=DKM08_05335 NZ_QFYX01000001.1 Protein Homology CDS 1048344 1049525 . + 0 ID=cds-WP_003406299.1;Parent=gene-DKM08_RS05345;Dbxref=GenBank:WP_003406299.1;Name=WP_003406299.1;gbkey=CDS;gene=sugC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215754.1;locus_tag=DKM08_RS05345;product=trehalose ABC transporter ATP-binding protein SugC;protein_id=WP_003406299.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1049602 1050702 . - . ID=gene-DKM08_RS05350;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=DKM08_RS05350;old_locus_tag=DKM08_05340 NZ_QFYX01000001.1 Protein Homology CDS 1049602 1050702 . - 0 ID=cds-WP_003406300.1;Parent=gene-DKM08_RS05350;Dbxref=GenBank:WP_003406300.1;Name=WP_003406300.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215755.1;locus_tag=DKM08_RS05350;product=magnesium/cobalt transporter CorA;protein_id=WP_003406300.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1050873 1051862 . + . ID=gene-DKM08_RS05355;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=DKM08_RS05355;old_locus_tag=DKM08_05345 NZ_QFYX01000001.1 Protein Homology CDS 1050873 1051862 . + 0 ID=cds-WP_003406301.1;Parent=gene-DKM08_RS05355;Dbxref=GenBank:WP_003406301.1;Name=WP_003406301.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;gene=mdh;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215756.1;locus_tag=DKM08_RS05355;product=malate dehydrogenase;protein_id=WP_003406301.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1051938 1052198 . + . ID=gene-DKM08_RS05360;Name=vapB33;gbkey=Gene;gene=vapB33;gene_biotype=protein_coding;locus_tag=DKM08_RS05360;old_locus_tag=DKM08_05350 NZ_QFYX01000001.1 Protein Homology CDS 1051938 1052198 . + 0 ID=cds-WP_003406302.1;Parent=gene-DKM08_RS05360;Dbxref=GenBank:WP_003406302.1;Name=WP_003406302.1;gbkey=CDS;gene=vapB33;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215757.1;locus_tag=DKM08_RS05360;product=type II toxin-antitoxin system antitoxin VapB33;protein_id=WP_003406302.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1052195 1052626 . + . ID=gene-DKM08_RS05365;Name=DKM08_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05365;old_locus_tag=DKM08_05355 NZ_QFYX01000001.1 Protein Homology CDS 1052195 1052626 . + 0 ID=cds-WP_003406304.1;Parent=gene-DKM08_RS05365;Dbxref=GenBank:WP_003406304.1;Name=WP_003406304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215758.1;locus_tag=DKM08_RS05365;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003406304.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1052649 1054337 . - . ID=gene-DKM08_RS05370;Name=DKM08_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05370;old_locus_tag=DKM08_05360 NZ_QFYX01000001.1 Protein Homology CDS 1052649 1054337 . - 0 ID=cds-WP_003910308.1;Parent=gene-DKM08_RS05370;Dbxref=GenBank:WP_003910308.1;Name=WP_003910308.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177798.1;locus_tag=DKM08_RS05370;product=PE family protein;protein_id=WP_003910308.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1054517 1055377 . + . ID=gene-DKM08_RS05380;Name=lpqZ;gbkey=Gene;gene=lpqZ;gene_biotype=protein_coding;locus_tag=DKM08_RS05380;old_locus_tag=DKM08_05370 NZ_QFYX01000001.1 Protein Homology CDS 1054517 1055377 . + 0 ID=cds-WP_003406306.1;Parent=gene-DKM08_RS05380;Dbxref=GenBank:WP_003406306.1;Name=WP_003406306.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=lpqZ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215760.1;locus_tag=DKM08_RS05380;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_003406306.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1055458 1056288 . - . ID=gene-DKM08_RS05385;Name=DKM08_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05385;old_locus_tag=DKM08_05375 NZ_QFYX01000001.1 Protein Homology CDS 1055458 1056288 . - 0 ID=cds-WP_003898788.1;Parent=gene-DKM08_RS05385;Dbxref=GenBank:WP_003898788.1;Name=WP_003898788.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215761.1;locus_tag=DKM08_RS05385;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898788.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1056345 1056638 . - . ID=gene-DKM08_RS05390;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=DKM08_RS05390;old_locus_tag=DKM08_05380 NZ_QFYX01000001.1 Protein Homology CDS 1056345 1056638 . - 0 ID=cds-WP_003898789.1;Parent=gene-DKM08_RS05390;Dbxref=GenBank:WP_003898789.1;Name=WP_003898789.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215762.1;locus_tag=DKM08_RS05390;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_003898789.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1056635 1056904 . - . ID=gene-DKM08_RS05395;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=DKM08_RS05395;old_locus_tag=DKM08_05385 NZ_QFYX01000001.1 Protein Homology CDS 1056635 1056904 . - 0 ID=cds-WP_003406322.1;Parent=gene-DKM08_RS05395;Dbxref=GenBank:WP_003406322.1;Name=WP_003406322.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;gene=relB;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215763.1;locus_tag=DKM08_RS05395;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003406322.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1057017 1060712 . - . ID=gene-DKM08_RS05400;Name=DKM08_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05400;old_locus_tag=DKM08_05390 NZ_QFYX01000001.1 Protein Homology CDS 1057017 1060712 . - 0 ID=cds-WP_010950509.1;Parent=gene-DKM08_RS05400;Dbxref=GenBank:WP_010950509.1;Name=WP_010950509.1;Ontology_term=GO:0006099,GO:0004591,GO:0016746,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,acyltransferase activity|0016746||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215764.2;locus_tag=DKM08_RS05400;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;protein_id=WP_010950509.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1060854 1061642 . - . ID=gene-DKM08_RS05405;Name=DKM08_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05405;old_locus_tag=DKM08_05395 NZ_QFYX01000001.1 Protein Homology CDS 1060854 1061642 . - 0 ID=cds-WP_010950510.1;Parent=gene-DKM08_RS05405;Dbxref=GenBank:WP_010950510.1;Name=WP_010950510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215765.1;locus_tag=DKM08_RS05405;product=hypothetical protein;protein_id=WP_010950510.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1061839 1063578 . + . ID=gene-DKM08_RS05410;Name=DKM08_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05410;old_locus_tag=DKM08_05400 NZ_QFYX01000001.1 Protein Homology CDS 1061839 1063578 . + 0 ID=cds-WP_003406326.1;Parent=gene-DKM08_RS05410;Dbxref=GenBank:WP_003406326.1;Name=WP_003406326.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215766.1;locus_tag=DKM08_RS05410;product=MFS transporter;protein_id=WP_003406326.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1063481 1066900 . - . ID=gene-DKM08_RS05415;Name=DKM08_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05415;old_locus_tag=DKM08_05405 NZ_QFYX01000001.1 Protein Homology CDS 1063481 1066900 . - 0 ID=cds-WP_023349496.1;Parent=gene-DKM08_RS05415;Dbxref=GenBank:WP_023349496.1;Name=WP_023349496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215767.1;locus_tag=DKM08_RS05415;product=TM0106 family RecB-like putative nuclease;protein_id=WP_023349496.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1066956 1067564 . - . ID=gene-DKM08_RS05420;Name=lprE;gbkey=Gene;gene=lprE;gene_biotype=protein_coding;locus_tag=DKM08_RS05420;old_locus_tag=DKM08_05410 NZ_QFYX01000001.1 Protein Homology CDS 1066956 1067564 . - 0 ID=cds-WP_003406334.1;Parent=gene-DKM08_RS05420;Dbxref=GenBank:WP_003406334.1;Name=WP_003406334.1;gbkey=CDS;gene=lprE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215768.1;locus_tag=DKM08_RS05420;product=LppP/LprE family lipoprotein;protein_id=WP_003406334.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1067630 1069321 . + . ID=gene-DKM08_RS05425;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=DKM08_RS05425;old_locus_tag=DKM08_05415 NZ_QFYX01000001.1 Protein Homology CDS 1067630 1069321 . + 0 ID=cds-WP_003406344.1;Parent=gene-DKM08_RS05425;Dbxref=GenBank:WP_003406344.1;Name=WP_003406344.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215769.1;locus_tag=DKM08_RS05425;product=DEAD/DEAH box helicase;protein_id=WP_003406344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1069318 1070469 . + . ID=gene-DKM08_RS05430;Name=DKM08_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05430;old_locus_tag=DKM08_05420 NZ_QFYX01000001.1 Protein Homology CDS 1069318 1070469 . + 0 ID=cds-WP_003406347.1;Parent=gene-DKM08_RS05430;Dbxref=GenBank:WP_003406347.1;Name=WP_003406347.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215770.1;locus_tag=DKM08_RS05430;product=acyltransferase family protein;protein_id=WP_003406347.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1070567 1070737 . - . ID=gene-DKM08_RS22045;Name=DKM08_RS22045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22045;partial=true;pseudo=true;start_range=.,1070567 NZ_QFYX01000001.1 Protein Homology CDS 1070567 1070737 . - 0 ID=cds-DKM08_RS22045;Parent=gene-DKM08_RS22045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215773.1;locus_tag=DKM08_RS22045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1070567;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1070734 1071993 . - . ID=gene-DKM08_RS05440;Name=DKM08_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05440;old_locus_tag=DKM08_05430 NZ_QFYX01000001.1 Protein Homology CDS 1070734 1071993 . - 0 ID=cds-WP_003406359.1;Parent=gene-DKM08_RS05440;Dbxref=GenBank:WP_003406359.1;Name=WP_003406359.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215774.1;locus_tag=DKM08_RS05440;product=MFS transporter;protein_id=WP_003406359.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1072064 1072891 . + . ID=gene-DKM08_RS05445;Name=udgB;gbkey=Gene;gene=udgB;gene_biotype=protein_coding;locus_tag=DKM08_RS05445;old_locus_tag=DKM08_05435 NZ_QFYX01000001.1 Protein Homology CDS 1072064 1072891 . + 0 ID=cds-WP_003911466.1;Parent=gene-DKM08_RS05445;Dbxref=GenBank:WP_003911466.1;Name=WP_003911466.1;gbkey=CDS;gene=udgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724119.1;locus_tag=DKM08_RS05445;product=uracil-DNA glycosylase;protein_id=WP_003911466.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1072893 1074010 . + . ID=gene-DKM08_RS05450;Name=DKM08_RS05450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS05450;old_locus_tag=DKM08_05440;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1072893 1074010 . + 0 ID=cds-DKM08_RS05450;Parent=gene-DKM08_RS05450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215776.1;locus_tag=DKM08_RS05450;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1074136 1074585 . - . ID=gene-DKM08_RS05460;Name=DKM08_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05460;old_locus_tag=DKM08_05450 NZ_QFYX01000001.1 Protein Homology CDS 1074136 1074585 . - 0 ID=cds-WP_023349497.1;Parent=gene-DKM08_RS05460;Dbxref=GenBank:WP_023349497.1;Name=WP_023349497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215777.1;locus_tag=DKM08_RS05460;product=F420H(2)-dependent quinone reductase;protein_id=WP_023349497.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1074590 1075024 . - . ID=gene-DKM08_RS05465;Name=DKM08_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05465;old_locus_tag=DKM08_05455 NZ_QFYX01000001.1 Protein Homology CDS 1074590 1075024 . - 0 ID=cds-WP_003406366.1;Parent=gene-DKM08_RS05465;Dbxref=GenBank:WP_003406366.1;Name=WP_003406366.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215778.1;locus_tag=DKM08_RS05465;product=HIT family protein;protein_id=WP_003406366.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1075083 1076471 . + . ID=gene-DKM08_RS05470;Name=DKM08_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05470;old_locus_tag=DKM08_05460 NZ_QFYX01000001.1 Protein Homology CDS 1075083 1076471 . + 0 ID=cds-WP_003406369.1;Parent=gene-DKM08_RS05470;Dbxref=GenBank:WP_003406369.1;Name=WP_003406369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215779.1;locus_tag=DKM08_RS05470;product=amidase;protein_id=WP_003406369.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1076546 1077739 . + . ID=gene-DKM08_RS05475;Name=DKM08_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05475;old_locus_tag=DKM08_05465 NZ_QFYX01000001.1 Protein Homology CDS 1076546 1077739 . + 0 ID=cds-WP_010950513.1;Parent=gene-DKM08_RS05475;Dbxref=GenBank:WP_010950513.1;Name=WP_010950513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215780.1;locus_tag=DKM08_RS05475;product=adenylate cyclase;protein_id=WP_010950513.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1077912 1078592 . + . ID=gene-DKM08_RS05480;Name=abmR;gbkey=Gene;gene=abmR;gene_biotype=protein_coding;locus_tag=DKM08_RS05480;old_locus_tag=DKM08_05470 NZ_QFYX01000001.1 Protein Homology CDS 1077912 1078592 . + 0 ID=cds-WP_003406375.1;Parent=gene-DKM08_RS05480;Dbxref=GenBank:WP_003406375.1;Name=WP_003406375.1;gbkey=CDS;gene=abmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406375.1;locus_tag=DKM08_RS05480;product=transcriptional regulator AbmR;protein_id=WP_003406375.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1078612 1080402 . - . ID=gene-DKM08_RS05485;Name=pknH;gbkey=Gene;gene=pknH;gene_biotype=protein_coding;locus_tag=DKM08_RS05485;old_locus_tag=DKM08_05475 NZ_QFYX01000001.1 Protein Homology CDS 1078612 1080402 . - 0 ID=cds-WP_031662238.1;Parent=gene-DKM08_RS05485;Dbxref=GenBank:WP_031662238.1;Name=WP_031662238.1;gbkey=CDS;gene=pknH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215782.1;locus_tag=DKM08_RS05485;product=serine/threonine-protein kinase PknH/PknJ;protein_id=WP_031662238.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1080646 1083042 . - . ID=gene-DKM08_RS05490;Name=DKM08_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05490;old_locus_tag=DKM08_05480 NZ_QFYX01000001.1 Protein Homology CDS 1080646 1083042 . - 0 ID=cds-WP_043856373.1;Parent=gene-DKM08_RS05490;Dbxref=GenBank:WP_043856373.1;Name=WP_043856373.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014000690.1;locus_tag=DKM08_RS05490;product=FHA domain-containing protein;protein_id=WP_043856373.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1083053 1084783 . - . ID=gene-DKM08_RS05495;Name=DKM08_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05495;old_locus_tag=DKM08_05485 NZ_QFYX01000001.1 Protein Homology CDS 1083053 1084783 . - 0 ID=cds-WP_003908672.1;Parent=gene-DKM08_RS05495;Dbxref=GenBank:WP_003908672.1;Name=WP_003908672.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020788196.1;locus_tag=DKM08_RS05495;product=serine/threonine-protein kinase;protein_id=WP_003908672.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1085124 1086290 . - . ID=gene-DKM08_RS05500;Name=embR;gbkey=Gene;gene=embR;gene_biotype=protein_coding;locus_tag=DKM08_RS05500;old_locus_tag=DKM08_05490 NZ_QFYX01000001.1 Protein Homology CDS 1085124 1086290 . - 0 ID=cds-WP_003406553.1;Parent=gene-DKM08_RS05500;Dbxref=GenBank:WP_003406553.1;Name=WP_003406553.1;Note=Phosphorylation of EmbR by cognate serine/threonine kinase PknH leads to increased DNA-binding activity%2C increased expression of embCAB genes%2C and reduced senstivity to ethambutol.;gbkey=CDS;gene=embR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215783.1;locus_tag=DKM08_RS05500;product=ATPase/transcriptional regulator EmbR;protein_id=WP_003406553.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1086601 1087299 . - . ID=gene-DKM08_RS05510;Name=DKM08_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05510;old_locus_tag=DKM08_05500 NZ_QFYX01000001.1 Protein Homology CDS 1086601 1087299 . - 0 ID=cds-WP_003898800.1;Parent=gene-DKM08_RS05510;Dbxref=GenBank:WP_003898800.1;Name=WP_003898800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215784.1;locus_tag=DKM08_RS05510;product=C39 family peptidase;protein_id=WP_003898800.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1087522 1087896 . - . ID=gene-DKM08_RS05515;Name=DKM08_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05515;old_locus_tag=DKM08_05505 NZ_QFYX01000001.1 Protein Homology CDS 1087522 1087896 . - 0 ID=cds-WP_003406558.1;Parent=gene-DKM08_RS05515;Dbxref=GenBank:WP_003406558.1;Name=WP_003406558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215785.1;locus_tag=DKM08_RS05515;product=DUF4189 domain-containing protein;protein_id=WP_003406558.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1087957 1088691 . - . ID=gene-DKM08_RS05520;Name=lprA;gbkey=Gene;gene=lprA;gene_biotype=protein_coding;locus_tag=DKM08_RS05520;old_locus_tag=DKM08_05510 NZ_QFYX01000001.1 Protein Homology CDS 1087957 1088691 . - 0 ID=cds-WP_003406562.1;Parent=gene-DKM08_RS05520;Dbxref=GenBank:WP_003406562.1;Name=WP_003406562.1;gbkey=CDS;gene=lprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215786.1;locus_tag=DKM08_RS05520;product=TLR2 agonist LprA;protein_id=WP_003406562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1088904 1089245 . - . ID=gene-DKM08_RS05525;Name=DKM08_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05525;old_locus_tag=DKM08_05515 NZ_QFYX01000001.1 Protein Homology CDS 1088904 1089245 . - 0 ID=cds-WP_003406566.1;Parent=gene-DKM08_RS05525;Dbxref=GenBank:WP_003406566.1;Name=WP_003406566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215787.1;locus_tag=DKM08_RS05525;product=DUF732 domain-containing protein;protein_id=WP_003406566.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1089353 1091248 . - . ID=gene-DKM08_RS05530;Name=DKM08_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05530;old_locus_tag=DKM08_05520 NZ_QFYX01000001.1 Protein Homology CDS 1089353 1091248 . - 0 ID=cds-WP_003406569.1;Parent=gene-DKM08_RS05530;Dbxref=GenBank:WP_003406569.1;Name=WP_003406569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215788.1;locus_tag=DKM08_RS05530;product=fatty acid ABC transporter ATP-binding protein/permease;protein_id=WP_003406569.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1091245 1092993 . - . ID=gene-DKM08_RS05535;Name=DKM08_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05535;old_locus_tag=DKM08_05525 NZ_QFYX01000001.1 Protein Homology CDS 1091245 1092993 . - 0 ID=cds-WP_003406574.1;Parent=gene-DKM08_RS05535;Dbxref=GenBank:WP_003406574.1;Name=WP_003406574.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215789.1;locus_tag=DKM08_RS05535;product=ABC transporter ATP-binding protein;protein_id=WP_003406574.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1093140 1093697 . + . ID=gene-DKM08_RS05540;Name=lprB;gbkey=Gene;gene=lprB;gene_biotype=protein_coding;locus_tag=DKM08_RS05540;old_locus_tag=DKM08_05530 NZ_QFYX01000001.1 Protein Homology CDS 1093140 1093697 . + 0 ID=cds-WP_003406577.1;Parent=gene-DKM08_RS05540;Dbxref=GenBank:WP_003406577.1;Name=WP_003406577.1;gbkey=CDS;gene=lprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215790.1;locus_tag=DKM08_RS05540;product=DUF3558 domain-containing protein;protein_id=WP_003406577.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1093694 1094236 . + . ID=gene-DKM08_RS05545;Name=lprC;gbkey=Gene;gene=lprC;gene_biotype=protein_coding;locus_tag=DKM08_RS05545;old_locus_tag=DKM08_05535 NZ_QFYX01000001.1 Protein Homology CDS 1093694 1094236 . + 0 ID=cds-WP_003900308.1;Parent=gene-DKM08_RS05545;Dbxref=GenBank:WP_003900308.1;Name=WP_003900308.1;gbkey=CDS;gene=lprC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215791.1;locus_tag=DKM08_RS05545;product=DUF3558 domain-containing protein;protein_id=WP_003900308.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1094381 1094887 . - . ID=gene-DKM08_RS05555;Name=DKM08_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05555;old_locus_tag=DKM08_05545 NZ_QFYX01000001.1 Protein Homology CDS 1094381 1094887 . - 0 ID=cds-WP_015385265.1;Parent=gene-DKM08_RS05555;Dbxref=GenBank:WP_015385265.1;Name=WP_015385265.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385265.1;locus_tag=DKM08_RS05555;product=SixA phosphatase family protein;protein_id=WP_015385265.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1095209 1096360 . + . ID=gene-DKM08_RS05560;Name=DKM08_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05560;old_locus_tag=DKM08_05550 NZ_QFYX01000001.1 Protein Homology CDS 1095209 1096360 . + 0 ID=cds-WP_003911418.1;Parent=gene-DKM08_RS05560;Dbxref=GenBank:WP_003911418.1;Name=WP_003911418.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011741672.1;locus_tag=DKM08_RS05560;product=metallophosphoesterase family protein;protein_id=WP_003911418.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1096357 1098984 . + . ID=gene-DKM08_RS05565;Name=DKM08_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05565;old_locus_tag=DKM08_05555 NZ_QFYX01000001.1 Protein Homology CDS 1096357 1098984 . + 0 ID=cds-WP_003898806.1;Parent=gene-DKM08_RS05565;Dbxref=GenBank:WP_003898806.1;Name=WP_003898806.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215794.1;locus_tag=DKM08_RS05565;product=AAA family ATPase;protein_id=WP_003898806.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1099005 1100591 . + . ID=gene-DKM08_RS05570;Name=DKM08_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05570;old_locus_tag=DKM08_05560 NZ_QFYX01000001.1 Protein Homology CDS 1099005 1100591 . + 0 ID=cds-WP_003406598.1;Parent=gene-DKM08_RS05570;Dbxref=GenBank:WP_003406598.1;Name=WP_003406598.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215795.1;locus_tag=DKM08_RS05570;product=GMC family oxidoreductase;protein_id=WP_003406598.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1100608 1102383 . - . ID=gene-DKM08_RS05575;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=DKM08_RS05575;old_locus_tag=DKM08_05565 NZ_QFYX01000001.1 Protein Homology CDS 1100608 1102383 . - 0 ID=cds-WP_003900310.1;Parent=gene-DKM08_RS05575;Dbxref=GenBank:WP_003900310.1;Name=WP_003900310.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215796.1;locus_tag=DKM08_RS05575;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_003900310.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1102376 1104214 . - . ID=gene-DKM08_RS05580;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=DKM08_RS05580;old_locus_tag=DKM08_05570 NZ_QFYX01000001.1 Protein Homology CDS 1102376 1104214 . - 0 ID=cds-WP_003406602.1;Parent=gene-DKM08_RS05580;Dbxref=GenBank:WP_003406602.1;Name=WP_003406602.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215797.1;locus_tag=DKM08_RS05580;product=ABC transporter ATP-binding protein;protein_id=WP_003406602.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1104211 1105086 . - . ID=gene-DKM08_RS05585;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=DKM08_RS05585;old_locus_tag=DKM08_05575 NZ_QFYX01000001.1 Protein Homology CDS 1104211 1105086 . - 0 ID=cds-WP_003406607.1;Parent=gene-DKM08_RS05585;Dbxref=GenBank:WP_003406607.1;Name=WP_003406607.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=oppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215798.1;locus_tag=DKM08_RS05585;product=ABC transporter permease;protein_id=WP_003406607.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1105083 1106060 . - . ID=gene-DKM08_RS05590;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=DKM08_RS05590;old_locus_tag=DKM08_05580 NZ_QFYX01000001.1 Protein Homology CDS 1105083 1106060 . - 0 ID=cds-WP_003406613.1;Parent=gene-DKM08_RS05590;Dbxref=GenBank:WP_003406613.1;Name=WP_003406613.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215799.1;locus_tag=DKM08_RS05590;product=ABC transporter permease;protein_id=WP_003406613.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1106267 1106758 . + . ID=gene-DKM08_RS05595;Name=canA;gbkey=Gene;gene=canA;gene_biotype=protein_coding;locus_tag=DKM08_RS05595;old_locus_tag=DKM08_05585 NZ_QFYX01000001.1 Protein Homology CDS 1106267 1106758 . + 0 ID=cds-WP_003406616.1;Parent=gene-DKM08_RS05595;Dbxref=GenBank:WP_003406616.1;Name=WP_003406616.1;gbkey=CDS;gene=canA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215800.1;locus_tag=DKM08_RS05595;product=beta-carbonic anhydrase CanA;protein_id=WP_003406616.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1106852 1107850 . + . ID=gene-DKM08_RS05600;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=DKM08_RS05600;old_locus_tag=DKM08_05590 NZ_QFYX01000001.1 Protein Homology CDS 1106852 1107850 . + 0 ID=cds-WP_003406618.1;Parent=gene-DKM08_RS05600;Dbxref=GenBank:WP_003406618.1;Name=WP_003406618.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215801.1;locus_tag=DKM08_RS05600;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_003406618.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1107850 1109694 . + . ID=gene-DKM08_RS05605;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=DKM08_RS05605;old_locus_tag=DKM08_05595 NZ_QFYX01000001.1 Protein Homology CDS 1107850 1109694 . + 0 ID=cds-WP_003406621.1;Parent=gene-DKM08_RS05605;Dbxref=GenBank:WP_003406621.1;Name=WP_003406621.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215802.1;locus_tag=DKM08_RS05605;product=adenylyl-sulfate kinase;protein_id=WP_003406621.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1109748 1110233 . + . ID=gene-DKM08_RS05610;Name=DKM08_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05610;old_locus_tag=DKM08_05600 NZ_QFYX01000001.1 Protein Homology CDS 1109748 1110233 . + 0 ID=cds-WP_003406624.1;Parent=gene-DKM08_RS05610;Dbxref=GenBank:WP_003406624.1;Name=WP_003406624.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215803.1;locus_tag=DKM08_RS05610;product=Rrf2 family transcriptional regulator;protein_id=WP_003406624.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1110291 1111508 . + . ID=gene-DKM08_RS05615;Name=DKM08_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05615;old_locus_tag=DKM08_05605 NZ_QFYX01000001.1 Protein Homology CDS 1110291 1111508 . + 0 ID=cds-WP_010950518.1;Parent=gene-DKM08_RS05615;Dbxref=GenBank:WP_010950518.1;Name=WP_010950518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950518.1;locus_tag=DKM08_RS05615;product=alpha/beta hydrolase-fold protein;protein_id=WP_010950518.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1111557 1112189 . + . ID=gene-DKM08_RS05620;Name=DKM08_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05620;old_locus_tag=DKM08_05610 NZ_QFYX01000001.1 Protein Homology CDS 1111557 1112189 . + 0 ID=cds-WP_003406626.1;Parent=gene-DKM08_RS05620;Dbxref=GenBank:WP_003406626.1;Name=WP_003406626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215805.1;locus_tag=DKM08_RS05620;product=hypothetical protein;protein_id=WP_003406626.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1112328 1113893 . - . ID=gene-DKM08_RS05625;Name=DKM08_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05625;old_locus_tag=DKM08_05615 NZ_QFYX01000001.1 Protein Homology CDS 1112328 1113893 . - 0 ID=cds-WP_003406627.1;Parent=gene-DKM08_RS05625;Dbxref=GenBank:WP_003406627.1;Name=WP_003406627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215806.1;locus_tag=DKM08_RS05625;product=DUF2254 domain-containing protein;protein_id=WP_003406627.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1113904 1114218 . + . ID=gene-DKM08_RS05630;Name=DKM08_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05630;old_locus_tag=DKM08_05620 NZ_QFYX01000001.1 Protein Homology CDS 1113904 1114218 . + 0 ID=cds-WP_003406628.1;Parent=gene-DKM08_RS05630;Dbxref=GenBank:WP_003406628.1;Name=WP_003406628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177642.1;locus_tag=DKM08_RS05630;product=hypothetical protein;protein_id=WP_003406628.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1114345 1114680 . - . ID=gene-DKM08_RS05635;Name=DKM08_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05635;old_locus_tag=DKM08_05625 NZ_QFYX01000001.1 Protein Homology CDS 1114345 1114680 . - 0 ID=cds-WP_003406629.1;Parent=gene-DKM08_RS05635;Dbxref=GenBank:WP_003406629.1;Name=WP_003406629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215807.1;locus_tag=DKM08_RS05635;product=DUF732 domain-containing protein;protein_id=WP_003406629.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1115039 1115111 . - . ID=gene-DKM08_RS05640;Name=DKM08_RS05640;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS05640;old_locus_tag=DKM08_05630 NZ_QFYX01000001.1 tRNAscan-SE tRNA 1115039 1115111 . - . ID=rna-DKM08_RS05640;Parent=gene-DKM08_RS05640;anticodon=(pos:complement(1115076..1115078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS05640;product=tRNA-Arg NZ_QFYX01000001.1 tRNAscan-SE exon 1115039 1115111 . - . ID=exon-DKM08_RS05640-1;Parent=rna-DKM08_RS05640;anticodon=(pos:complement(1115076..1115078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS05640;product=tRNA-Arg NZ_QFYX01000001.1 RefSeq gene 1115225 1116877 . + . ID=gene-DKM08_RS05645;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=DKM08_RS05645;old_locus_tag=DKM08_05635 NZ_QFYX01000001.1 Protein Homology CDS 1115225 1116877 . + 0 ID=cds-WP_003406630.1;Parent=gene-DKM08_RS05645;Dbxref=GenBank:WP_003406630.1;Name=WP_003406630.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215808.1;locus_tag=DKM08_RS05645;product=arginine--tRNA ligase;protein_id=WP_003406630.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1116874 1118217 . + . ID=gene-DKM08_RS05650;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=DKM08_RS05650;old_locus_tag=DKM08_05640 NZ_QFYX01000001.1 Protein Homology CDS 1116874 1118217 . + 0 ID=cds-WP_003406632.1;Parent=gene-DKM08_RS05650;Dbxref=GenBank:WP_003406632.1;Name=WP_003406632.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215809.1;locus_tag=DKM08_RS05650;product=diaminopimelate decarboxylase;protein_id=WP_003406632.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1118221 1119546 . + . ID=gene-DKM08_RS05655;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=DKM08_RS05655;old_locus_tag=DKM08_05645 NZ_QFYX01000001.1 Protein Homology CDS 1118221 1119546 . + 0 ID=cds-WP_003406648.1;Parent=gene-DKM08_RS05655;Dbxref=GenBank:WP_003406648.1;Name=WP_003406648.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;gene=thrA;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215810.1;locus_tag=DKM08_RS05655;product=homoserine dehydrogenase;protein_id=WP_003406648.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1119543 1120625 . + . ID=gene-DKM08_RS05660;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=DKM08_RS05660;old_locus_tag=DKM08_05650 NZ_QFYX01000001.1 Protein Homology CDS 1119543 1120625 . + 0 ID=cds-WP_003406652.1;Parent=gene-DKM08_RS05660;Dbxref=GenBank:WP_003406652.1;Name=WP_003406652.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215811.1;locus_tag=DKM08_RS05660;product=threonine synthase;protein_id=WP_003406652.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1120843 1121793 . + . ID=gene-DKM08_RS05670;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=DKM08_RS05670;old_locus_tag=DKM08_05660 NZ_QFYX01000001.1 Protein Homology CDS 1120843 1121793 . + 0 ID=cds-WP_003406654.1;Parent=gene-DKM08_RS05670;Dbxref=GenBank:WP_003406654.1;Name=WP_003406654.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215812.1;locus_tag=DKM08_RS05670;product=homoserine kinase;protein_id=WP_003406654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1122050 1123858 . + . ID=gene-DKM08_RS05680;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=DKM08_RS05680;old_locus_tag=DKM08_05670 NZ_QFYX01000001.1 Protein Homology CDS 1122050 1123858 . + 0 ID=cds-WP_003898814.1;Parent=gene-DKM08_RS05680;Dbxref=GenBank:WP_003898814.1;Name=WP_003898814.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215813.1;locus_tag=DKM08_RS05680;product=transcription termination factor Rho;protein_id=WP_003898814.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1124009 1124251 . + . ID=gene-DKM08_RS05690;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=DKM08_RS05690;old_locus_tag=DKM08_05680 NZ_QFYX01000001.1 Protein Homology CDS 1124009 1124251 . + 0 ID=cds-WP_003406668.1;Parent=gene-DKM08_RS05690;Dbxref=GenBank:WP_003406668.1;Name=WP_003406668.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215814.1;locus_tag=DKM08_RS05690;product=50S ribosomal protein L31;protein_id=WP_003406668.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1124341 1125414 . + . ID=gene-DKM08_RS05695;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=DKM08_RS05695;old_locus_tag=DKM08_05685 NZ_QFYX01000001.1 Protein Homology CDS 1124341 1125414 . + 0 ID=cds-WP_003406670.1;Parent=gene-DKM08_RS05695;Dbxref=GenBank:WP_003406670.1;Name=WP_003406670.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215815.1;locus_tag=DKM08_RS05695;product=peptide chain release factor 1;protein_id=WP_003406670.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1125474 1126388 . + . ID=gene-DKM08_RS05700;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=DKM08_RS05700;old_locus_tag=DKM08_05690 NZ_QFYX01000001.1 Protein Homology CDS 1125474 1126388 . + 0 ID=cds-WP_003917449.1;Parent=gene-DKM08_RS05700;Dbxref=GenBank:WP_003917449.1;Name=WP_003917449.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003922247.1;locus_tag=DKM08_RS05700;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_003917449.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1126404 1127057 . + . ID=gene-DKM08_RS05705;Name=DKM08_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05705;old_locus_tag=DKM08_05695 NZ_QFYX01000001.1 Protein Homology CDS 1126404 1127057 . + 0 ID=cds-WP_003406678.1;Parent=gene-DKM08_RS05705;Dbxref=GenBank:WP_003406678.1;Name=WP_003406678.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215817.1;locus_tag=DKM08_RS05705;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_003406678.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1127141 1128355 . + . ID=gene-DKM08_RS05710;Name=rfe;gbkey=Gene;gene=rfe;gene_biotype=protein_coding;locus_tag=DKM08_RS05710;old_locus_tag=DKM08_05700 NZ_QFYX01000001.1 Protein Homology CDS 1127141 1128355 . + 0 ID=cds-WP_003406679.1;Parent=gene-DKM08_RS05710;Dbxref=GenBank:WP_003406679.1;Name=WP_003406679.1;gbkey=CDS;gene=rfe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215818.1;locus_tag=DKM08_RS05710;product=UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_003406679.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1128612 1129097 . + . ID=gene-DKM08_RS05715;Name=DKM08_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05715;old_locus_tag=DKM08_05705 NZ_QFYX01000001.1 Protein Homology CDS 1128612 1129097 . + 0 ID=cds-WP_003406680.1;Parent=gene-DKM08_RS05715;Dbxref=GenBank:WP_003406680.1;Name=WP_003406680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215819.1;locus_tag=DKM08_RS05715;product=ATP synthase subunit I;protein_id=WP_003406680.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1129090 1129842 . + . ID=gene-DKM08_RS05720;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=DKM08_RS05720;old_locus_tag=DKM08_05710 NZ_QFYX01000001.1 Protein Homology CDS 1129090 1129842 . + 0 ID=cds-WP_003406681.1;Parent=gene-DKM08_RS05720;Dbxref=GenBank:WP_003406681.1;Name=WP_003406681.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215820.1;locus_tag=DKM08_RS05720;product=F0F1 ATP synthase subunit A;protein_id=WP_003406681.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1129891 1130136 . + . ID=gene-DKM08_RS05725;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DKM08_RS05725;old_locus_tag=DKM08_05715 NZ_QFYX01000001.1 Protein Homology CDS 1129891 1130136 . + 0 ID=cds-WP_003406686.1;Parent=gene-DKM08_RS05725;Dbxref=GenBank:WP_003406686.1;Name=WP_003406686.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215821.1;locus_tag=DKM08_RS05725;product=F0F1 ATP synthase subunit C;protein_id=WP_003406686.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1130167 1130682 . + . ID=gene-DKM08_RS05730;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=DKM08_RS05730;old_locus_tag=DKM08_05720 NZ_QFYX01000001.1 Protein Homology CDS 1130167 1130682 . + 0 ID=cds-WP_003898818.1;Parent=gene-DKM08_RS05730;Dbxref=GenBank:WP_003898818.1;Name=WP_003898818.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215822.1;locus_tag=DKM08_RS05730;product=F0F1 ATP synthase subunit B;protein_id=WP_003898818.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1130689 1132029 . + . ID=gene-DKM08_RS05735;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=DKM08_RS05735;old_locus_tag=DKM08_05725 NZ_QFYX01000001.1 Protein Homology CDS 1130689 1132029 . + 0 ID=cds-WP_003406697.1;Parent=gene-DKM08_RS05735;Dbxref=GenBank:WP_003406697.1;Name=WP_003406697.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215823.1;locus_tag=DKM08_RS05735;product=F0F1 ATP synthase subunit B/delta;protein_id=WP_003406697.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1132074 1133723 . + . ID=gene-DKM08_RS05740;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=DKM08_RS05740;old_locus_tag=DKM08_05730 NZ_QFYX01000001.1 Protein Homology CDS 1132074 1133723 . + 0 ID=cds-WP_023349498.1;Parent=gene-DKM08_RS05740;Dbxref=GenBank:WP_023349498.1;Name=WP_023349498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215824.1;locus_tag=DKM08_RS05740;product=F0F1 ATP synthase subunit alpha;protein_id=WP_023349498.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1133730 1134647 . + . ID=gene-DKM08_RS05745;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=DKM08_RS05745;old_locus_tag=DKM08_05735 NZ_QFYX01000001.1 Protein Homology CDS 1133730 1134647 . + 0 ID=cds-WP_003898819.1;Parent=gene-DKM08_RS05745;Dbxref=GenBank:WP_003898819.1;Name=WP_003898819.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215825.1;locus_tag=DKM08_RS05745;product=F0F1 ATP synthase subunit gamma;protein_id=WP_003898819.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1134687 1136147 . + . ID=gene-DKM08_RS05750;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=DKM08_RS05750;old_locus_tag=DKM08_05740 NZ_QFYX01000001.1 Protein Homology CDS 1134687 1136147 . + 0 ID=cds-WP_003406701.1;Parent=gene-DKM08_RS05750;Dbxref=GenBank:WP_003406701.1;Name=WP_003406701.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215826.1;locus_tag=DKM08_RS05750;product=F0F1 ATP synthase subunit beta;protein_id=WP_003406701.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1136161 1136526 . + . ID=gene-DKM08_RS05755;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=DKM08_RS05755;old_locus_tag=DKM08_05745 NZ_QFYX01000001.1 Protein Homology CDS 1136161 1136526 . + 0 ID=cds-WP_003406708.1;Parent=gene-DKM08_RS05755;Dbxref=GenBank:WP_003406708.1;Name=WP_003406708.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215827.1;locus_tag=DKM08_RS05755;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_003406708.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1136534 1136975 . + . ID=gene-DKM08_RS05760;Name=DKM08_RS05760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS05760;old_locus_tag=DKM08_05750;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1136534 1136975 . + 0 ID=cds-DKM08_RS05760;Parent=gene-DKM08_RS05760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215828.1;locus_tag=DKM08_RS05760;product=DUF2550 domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1137015 1138338 . - . ID=gene-DKM08_RS05765;Name=DKM08_RS05765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS05765;old_locus_tag=DKM08_05755;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1137015 1138338 . - 0 ID=cds-DKM08_RS05765;Parent=gene-DKM08_RS05765;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=DKM08_RS05765;product=ISL3-like element IS1557 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1138504 1139085 . - . ID=gene-DKM08_RS05770;Name=DKM08_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05770;old_locus_tag=DKM08_05760 NZ_QFYX01000001.1 Protein Homology CDS 1138504 1139085 . - 0 ID=cds-WP_003406839.1;Parent=gene-DKM08_RS05770;Dbxref=GenBank:WP_003406839.1;Name=WP_003406839.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215830.1;locus_tag=DKM08_RS05770;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003406839.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1139154 1140410 . + . ID=gene-DKM08_RS05775;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=DKM08_RS05775;old_locus_tag=DKM08_05765 NZ_QFYX01000001.1 Protein Homology CDS 1139154 1140410 . + 0 ID=cds-WP_023349499.1;Parent=gene-DKM08_RS05775;Dbxref=GenBank:WP_023349499.1;Name=WP_023349499.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215831.1;locus_tag=DKM08_RS05775;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_023349499.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1140682 1142213 . + . ID=gene-DKM08_RS05780;Name=DKM08_RS05780;gbkey=Gene;gene_biotype=rRNA;locus_tag=DKM08_RS05780;old_locus_tag=DKM08_05770 NZ_QFYX01000001.1 cmsearch rRNA 1140682 1142213 . + . ID=rna-DKM08_RS05780;Parent=gene-DKM08_RS05780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS05780;product=16S ribosomal RNA NZ_QFYX01000001.1 cmsearch exon 1140682 1142213 . + . ID=exon-DKM08_RS05780-1;Parent=rna-DKM08_RS05780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS05780;product=16S ribosomal RNA NZ_QFYX01000001.1 RefSeq gene 1142491 1145628 . + . ID=gene-DKM08_RS05785;Name=DKM08_RS05785;gbkey=Gene;gene_biotype=rRNA;locus_tag=DKM08_RS05785;old_locus_tag=DKM08_05775 NZ_QFYX01000001.1 cmsearch rRNA 1142491 1145628 . + . ID=rna-DKM08_RS05785;Parent=gene-DKM08_RS05785;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS05785;product=23S ribosomal RNA NZ_QFYX01000001.1 cmsearch exon 1142491 1145628 . + . ID=exon-DKM08_RS05785-1;Parent=rna-DKM08_RS05785;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS05785;product=23S ribosomal RNA NZ_QFYX01000001.1 RefSeq gene 1145733 1145845 . + . ID=gene-DKM08_RS05790;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=DKM08_RS05790;old_locus_tag=DKM08_05780 NZ_QFYX01000001.1 cmsearch rRNA 1145733 1145845 . + . ID=rna-DKM08_RS05790;Parent=gene-DKM08_RS05790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS05790;product=5S ribosomal RNA NZ_QFYX01000001.1 cmsearch exon 1145733 1145845 . + . ID=exon-DKM08_RS05790-1;Parent=rna-DKM08_RS05790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS05790;product=5S ribosomal RNA NZ_QFYX01000001.1 RefSeq gene 1145967 1146464 . - . ID=gene-DKM08_RS05795;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=DKM08_RS05795;old_locus_tag=DKM08_05785 NZ_QFYX01000001.1 Protein Homology CDS 1145967 1146464 . - 0 ID=cds-WP_003406857.1;Parent=gene-DKM08_RS05795;Dbxref=GenBank:WP_003406857.1;Name=WP_003406857.1;gbkey=CDS;gene=ogt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215832.1;locus_tag=DKM08_RS05795;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_003406857.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1146461 1147951 . - . ID=gene-DKM08_RS05800;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=DKM08_RS05800;old_locus_tag=DKM08_05790 NZ_QFYX01000001.1 Protein Homology CDS 1146461 1147951 . - 0 ID=cds-WP_003406860.1;Parent=gene-DKM08_RS05800;Dbxref=GenBank:WP_003406860.1;Name=WP_003406860.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215833.1;locus_tag=DKM08_RS05800;product=bifunctional regulatory protein/DNA repair enzyme AlkA;protein_id=WP_003406860.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1148032 1149657 . - . ID=gene-DKM08_RS05805;Name=DKM08_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05805;old_locus_tag=DKM08_05795 NZ_QFYX01000001.1 Protein Homology CDS 1148032 1149657 . - 0 ID=cds-WP_003406864.1;Parent=gene-DKM08_RS05805;Dbxref=GenBank:WP_003406864.1;Name=WP_003406864.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215834.1;locus_tag=DKM08_RS05805;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003406864.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1149727 1151334 . - . ID=gene-DKM08_RS05810;Name=DKM08_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05810;old_locus_tag=DKM08_05800 NZ_QFYX01000001.1 Protein Homology CDS 1149727 1151334 . - 0 ID=cds-WP_003406867.1;Parent=gene-DKM08_RS05810;Dbxref=GenBank:WP_003406867.1;Name=WP_003406867.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=DKM08_RS05810;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003406867.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1151347 1153050 . - . ID=gene-DKM08_RS05815;Name=DKM08_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05815;old_locus_tag=DKM08_05805 NZ_QFYX01000001.1 Protein Homology CDS 1151347 1153050 . - 0 ID=cds-WP_003898821.1;Parent=gene-DKM08_RS05815;Dbxref=GenBank:WP_003898821.1;Name=WP_003898821.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215836.1;locus_tag=DKM08_RS05815;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003898821.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1153121 1153792 . + . ID=gene-DKM08_RS05820;Name=nucS;gbkey=Gene;gene=nucS;gene_biotype=protein_coding;locus_tag=DKM08_RS05820;old_locus_tag=DKM08_05810 NZ_QFYX01000001.1 Protein Homology CDS 1153121 1153792 . + 0 ID=cds-WP_003406872.1;Parent=gene-DKM08_RS05820;Dbxref=GenBank:WP_003406872.1;Name=WP_003406872.1;Ontology_term=GO:0004519;gbkey=CDS;gene=nucS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011893218.1;locus_tag=DKM08_RS05820;product=endonuclease NucS;protein_id=WP_003406872.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1153815 1154111 . + . ID=gene-DKM08_RS05825;Name=DKM08_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05825;old_locus_tag=DKM08_05815 NZ_QFYX01000001.1 Protein Homology CDS 1153815 1154111 . + 0 ID=cds-WP_003898823.1;Parent=gene-DKM08_RS05825;Dbxref=GenBank:WP_003898823.1;Name=WP_003898823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215838.1;locus_tag=DKM08_RS05825;product=hypothetical protein;protein_id=WP_003898823.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1154146 1154604 . - . ID=gene-DKM08_RS05830;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=DKM08_RS05830;old_locus_tag=DKM08_05820 NZ_QFYX01000001.1 Protein Homology CDS 1154146 1154604 . - 0 ID=cds-WP_003406879.1;Parent=gene-DKM08_RS05830;Dbxref=GenBank:WP_003406879.1;Name=WP_003406879.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177643.1;locus_tag=DKM08_RS05830;product=methylmalonyl-CoA epimerase;protein_id=WP_003406879.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1154683 1155864 . + . ID=gene-DKM08_RS05835;Name=DKM08_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05835;old_locus_tag=DKM08_05825 NZ_QFYX01000001.1 Protein Homology CDS 1154683 1155864 . + 0 ID=cds-WP_023637385.1;Parent=gene-DKM08_RS05835;Dbxref=GenBank:WP_023637385.1;Name=WP_023637385.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020726153.1;locus_tag=DKM08_RS05835;product=acetyl-CoA C-acetyltransferase;protein_id=WP_023637385.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1155994 1156908 . + . ID=gene-DKM08_RS05840;Name=DKM08_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05840;old_locus_tag=DKM08_05830 NZ_QFYX01000001.1 Protein Homology CDS 1155994 1156908 . + 0 ID=cds-WP_003406887.1;Parent=gene-DKM08_RS05840;Dbxref=GenBank:WP_003406887.1;Name=WP_003406887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215840.1;locus_tag=DKM08_RS05840;product=thioredoxin family protein;protein_id=WP_003406887.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1156987 1158798 . - . ID=gene-DKM08_RS05845;Name=DKM08_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05845;old_locus_tag=DKM08_05835 NZ_QFYX01000001.1 Protein Homology CDS 1156987 1158798 . - 0 ID=cds-WP_010950524.1;Parent=gene-DKM08_RS05845;Dbxref=GenBank:WP_010950524.1;Name=WP_010950524.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177799.1;locus_tag=DKM08_RS05845;product=PE family protein;protein_id=WP_010950524.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1158950 1161145 . - . ID=gene-DKM08_RS05850;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=DKM08_RS05850;old_locus_tag=DKM08_05840 NZ_QFYX01000001.1 Protein Homology CDS 1158950 1161145 . - 0 ID=cds-WP_003406892.1;Parent=gene-DKM08_RS05850;Dbxref=GenBank:WP_003406892.1;Name=WP_003406892.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215842.1;locus_tag=DKM08_RS05850;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_003406892.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1161153 1163219 . - . ID=gene-DKM08_RS05855;Name=glgE;gbkey=Gene;gene=glgE;gene_biotype=protein_coding;locus_tag=DKM08_RS05855;old_locus_tag=DKM08_05845 NZ_QFYX01000001.1 Protein Homology CDS 1161153 1163219 . - 0 ID=cds-WP_003915171.1;Parent=gene-DKM08_RS05855;Dbxref=GenBank:WP_003915171.1;Name=WP_003915171.1;gbkey=CDS;gene=glgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915171.1;locus_tag=DKM08_RS05855;product=alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase;protein_id=WP_003915171.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1163397 1165988 . + . ID=gene-DKM08_RS05860;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=DKM08_RS05860;old_locus_tag=DKM08_05850 NZ_QFYX01000001.1 Protein Homology CDS 1163397 1165988 . + 0 ID=cds-WP_010950525.1;Parent=gene-DKM08_RS05860;Dbxref=GenBank:WP_010950525.1;Name=WP_010950525.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215844.1;locus_tag=DKM08_RS05860;product=glycosyltransferase family 1 protein;protein_id=WP_010950525.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1166028 1168022 . - . ID=gene-DKM08_RS05865;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=DKM08_RS05865;old_locus_tag=DKM08_05855 NZ_QFYX01000001.1 Protein Homology CDS 1166028 1168022 . - 0 ID=cds-WP_003898827.1;Parent=gene-DKM08_RS05865;Dbxref=GenBank:WP_003898827.1;Name=WP_003898827.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215845.1;locus_tag=DKM08_RS05865;product=ATP-dependent helicase DinG;protein_id=WP_003898827.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1168046 1169392 . - . ID=gene-DKM08_RS05870;Name=DKM08_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05870;old_locus_tag=DKM08_05860 NZ_QFYX01000001.1 Protein Homology CDS 1168046 1169392 . - 0 ID=cds-WP_003900321.1;Parent=gene-DKM08_RS05870;Dbxref=GenBank:WP_003900321.1;Name=WP_003900321.1;Ontology_term=GO:0009435,GO:0004514,GO:0004516;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA,nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215846.2;locus_tag=DKM08_RS05870;product=nicotinate phosphoribosyltransferase;protein_id=WP_003900321.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1169494 1169799 . + . ID=gene-DKM08_RS05875;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=DKM08_RS05875;old_locus_tag=DKM08_05865 NZ_QFYX01000001.1 Protein Homology CDS 1169494 1169799 . + 0 ID=cds-WP_003406906.1;Parent=gene-DKM08_RS05875;Dbxref=GenBank:WP_003406906.1;Name=WP_003406906.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215847.1;locus_tag=DKM08_RS05875;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_003406906.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1169825 1170415 . + . ID=gene-DKM08_RS05880;Name=DKM08_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05880;old_locus_tag=DKM08_05870 NZ_QFYX01000001.1 Protein Homology CDS 1169825 1170415 . + 0 ID=cds-WP_003406907.1;Parent=gene-DKM08_RS05880;Dbxref=GenBank:WP_003406907.1;Name=WP_003406907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008254882.1;locus_tag=DKM08_RS05880;product=DUF2017 domain-containing protein;protein_id=WP_003406907.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1170432 1171466 . + . ID=gene-DKM08_RS05885;Name=DKM08_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05885;old_locus_tag=DKM08_05875 NZ_QFYX01000001.1 Protein Homology CDS 1170432 1171466 . + 0 ID=cds-WP_003406908.1;Parent=gene-DKM08_RS05885;Dbxref=GenBank:WP_003406908.1;Name=WP_003406908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215849.1;locus_tag=DKM08_RS05885;product=P1 family peptidase;protein_id=WP_003406908.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1171474 1171914 . + . ID=gene-DKM08_RS05890;Name=mec;gbkey=Gene;gene=mec;gene_biotype=protein_coding;locus_tag=DKM08_RS05890;old_locus_tag=DKM08_05880 NZ_QFYX01000001.1 Protein Homology CDS 1171474 1171914 . + 0 ID=cds-WP_003898830.1;Parent=gene-DKM08_RS05890;Dbxref=GenBank:WP_003898830.1;Name=WP_003898830.1;gbkey=CDS;gene=mec;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215850.1;locus_tag=DKM08_RS05890;product=CysO-cysteine peptidase;protein_id=WP_003898830.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1171936 1172217 . + . ID=gene-DKM08_RS05895;Name=cysO;gbkey=Gene;gene=cysO;gene_biotype=protein_coding;locus_tag=DKM08_RS05895;old_locus_tag=DKM08_05885 NZ_QFYX01000001.1 Protein Homology CDS 1171936 1172217 . + 0 ID=cds-WP_003406910.1;Parent=gene-DKM08_RS05895;Dbxref=GenBank:WP_003406910.1;Name=WP_003406910.1;gbkey=CDS;gene=cysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215851.1;locus_tag=DKM08_RS05895;product=sulfur carrier protein CysO;protein_id=WP_003406910.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1172227 1173198 . + . ID=gene-DKM08_RS05900;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=DKM08_RS05900;old_locus_tag=DKM08_05890 NZ_QFYX01000001.1 Protein Homology CDS 1172227 1173198 . + 0 ID=cds-WP_003406912.1;Parent=gene-DKM08_RS05900;Dbxref=GenBank:WP_003406912.1;Name=WP_003406912.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215852.1;locus_tag=DKM08_RS05900;product=O-phosphoserine sulfhydrylase;protein_id=WP_003406912.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1173189 1173911 . + . ID=gene-DKM08_RS05905;Name=DKM08_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05905;old_locus_tag=DKM08_05895 NZ_QFYX01000001.1 Protein Homology CDS 1173189 1173911 . + 0 ID=cds-WP_003898831.1;Parent=gene-DKM08_RS05905;Dbxref=GenBank:WP_003898831.1;Name=WP_003898831.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215853.1;locus_tag=DKM08_RS05905;product=rhomboid family intramembrane serine protease;protein_id=WP_003898831.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1173908 1174723 . + . ID=gene-DKM08_RS05910;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=DKM08_RS05910;old_locus_tag=DKM08_05900 NZ_QFYX01000001.1 Protein Homology CDS 1173908 1174723 . + 0 ID=cds-WP_003406919.1;Parent=gene-DKM08_RS05910;Dbxref=GenBank:WP_003406919.1;Name=WP_003406919.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215854.1;locus_tag=DKM08_RS05910;product=glutamate racemase;protein_id=WP_003406919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1174795 1175571 . + . ID=gene-DKM08_RS05915;Name=DKM08_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05915;old_locus_tag=DKM08_05905 NZ_QFYX01000001.1 Protein Homology CDS 1174795 1175571 . + 0 ID=cds-WP_009936344.1;Parent=gene-DKM08_RS05915;Dbxref=GenBank:WP_009936344.1;Name=WP_009936344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936344.1;locus_tag=DKM08_RS05915;product=cyclic nucleotide-degrading phosphodiesterase;protein_id=WP_009936344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1175588 1176367 . + . ID=gene-DKM08_RS05920;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=DKM08_RS05920;old_locus_tag=DKM08_05910 NZ_QFYX01000001.1 Protein Homology CDS 1175588 1176367 . + 0 ID=cds-WP_003406926.1;Parent=gene-DKM08_RS05920;Dbxref=GenBank:WP_003406926.1;Name=WP_003406926.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215856.1;locus_tag=DKM08_RS05920;product=ribonuclease PH;protein_id=WP_003406926.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1176406 1177020 . + . ID=gene-DKM08_RS05925;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=DKM08_RS05925;old_locus_tag=DKM08_05915 NZ_QFYX01000001.1 Protein Homology CDS 1176406 1177020 . + 0 ID=cds-WP_003406931.1;Parent=gene-DKM08_RS05925;Dbxref=GenBank:WP_003406931.1;Name=WP_003406931.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215857.1;locus_tag=DKM08_RS05925;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_003406931.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1177017 1177379 . - . ID=gene-DKM08_RS05930;Name=DKM08_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05930;old_locus_tag=DKM08_05920 NZ_QFYX01000001.1 Protein Homology CDS 1177017 1177379 . - 0 ID=cds-WP_003406937.1;Parent=gene-DKM08_RS05930;Dbxref=GenBank:WP_003406937.1;Name=WP_003406937.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177800.1;locus_tag=DKM08_RS05930;product=DUF3817 domain-containing protein;protein_id=WP_003406937.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1177376 1177756 . - . ID=gene-DKM08_RS05935;Name=DKM08_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05935;old_locus_tag=DKM08_05925 NZ_QFYX01000001.1 Protein Homology CDS 1177376 1177756 . - 0 ID=cds-WP_003406940.1;Parent=gene-DKM08_RS05935;Dbxref=GenBank:WP_003406940.1;Name=WP_003406940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215859.1;locus_tag=DKM08_RS05935;product=hypothetical protein;protein_id=WP_003406940.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1177867 1178121 . + . ID=gene-DKM08_RS05940;Name=DKM08_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05940;old_locus_tag=DKM08_05930 NZ_QFYX01000001.1 Protein Homology CDS 1177867 1178121 . + 0 ID=cds-WP_003911484.1;Parent=gene-DKM08_RS05940;Dbxref=GenBank:WP_003911484.1;Name=WP_003911484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911484.1;locus_tag=DKM08_RS05940;product=acyl carrier protein;protein_id=WP_003911484.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1178114 1179679 . + . ID=gene-DKM08_RS05945;Name=mbtM;gbkey=Gene;gene=mbtM;gene_biotype=protein_coding;locus_tag=DKM08_RS05945;old_locus_tag=DKM08_05935 NZ_QFYX01000001.1 Protein Homology CDS 1178114 1179679 . + 0 ID=cds-WP_003406950.1;Parent=gene-DKM08_RS05945;Dbxref=GenBank:WP_003406950.1;Name=WP_003406950.1;gbkey=CDS;gene=mbtM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215861.1;locus_tag=DKM08_RS05945;product=long-chain-fatty acid--ACP ligase MbtM;protein_id=WP_003406950.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1179679 1180839 . + . ID=gene-DKM08_RS05950;Name=mbtN;gbkey=Gene;gene=mbtN;gene_biotype=protein_coding;locus_tag=DKM08_RS05950;old_locus_tag=DKM08_05940 NZ_QFYX01000001.1 Protein Homology CDS 1179679 1180839 . + 0 ID=cds-WP_003406953.1;Parent=gene-DKM08_RS05950;Dbxref=GenBank:WP_003406953.1;Name=WP_003406953.1;gbkey=CDS;gene=mbtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215862.1;locus_tag=DKM08_RS05950;product=acyl-ACP dehydrogenase MbtN;protein_id=WP_003406953.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1180806 1181438 . - . ID=gene-DKM08_RS05955;Name=mbtK;gbkey=Gene;gene=mbtK;gene_biotype=protein_coding;locus_tag=DKM08_RS05955;old_locus_tag=DKM08_05945 NZ_QFYX01000001.1 Protein Homology CDS 1180806 1181438 . - 0 ID=cds-WP_003406956.1;Parent=gene-DKM08_RS05955;Dbxref=GenBank:WP_003406956.1;Name=WP_003406956.1;gbkey=CDS;gene=mbtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215863.1;locus_tag=DKM08_RS05955;product=lysine N-acyltransferase MbtK;protein_id=WP_003406956.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1181561 1181644 . + . ID=gene-DKM08_RS05960;Name=DKM08_RS05960;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS05960;old_locus_tag=DKM08_05950 NZ_QFYX01000001.1 tRNAscan-SE tRNA 1181561 1181644 . + . ID=rna-DKM08_RS05960;Parent=gene-DKM08_RS05960;anticodon=(pos:1181595..1181597);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS05960;product=tRNA-Leu NZ_QFYX01000001.1 tRNAscan-SE exon 1181561 1181644 . + . ID=exon-DKM08_RS05960-1;Parent=rna-DKM08_RS05960;anticodon=(pos:1181595..1181597);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS05960;product=tRNA-Leu NZ_QFYX01000001.1 RefSeq gene 1181880 1184459 . + . ID=gene-DKM08_RS05965;Name=irtA;gbkey=Gene;gene=irtA;gene_biotype=protein_coding;locus_tag=DKM08_RS05965;old_locus_tag=DKM08_05955 NZ_QFYX01000001.1 Protein Homology CDS 1181880 1184459 . + 0 ID=cds-WP_003406958.1;Parent=gene-DKM08_RS05965;Dbxref=GenBank:WP_003406958.1;Name=WP_003406958.1;gbkey=CDS;gene=irtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215864.1;locus_tag=DKM08_RS05965;product=iron ABC transporter ATP-binding protein/permease IrtA;protein_id=WP_003406958.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1184456 1186195 . + . ID=gene-DKM08_RS05970;Name=irtB;gbkey=Gene;gene=irtB;gene_biotype=protein_coding;locus_tag=DKM08_RS05970;old_locus_tag=DKM08_05960 NZ_QFYX01000001.1 Protein Homology CDS 1184456 1186195 . + 0 ID=cds-WP_003900322.1;Parent=gene-DKM08_RS05970;Dbxref=GenBank:WP_003900322.1;Name=WP_003900322.1;gbkey=CDS;gene=irtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215865.1;locus_tag=DKM08_RS05970;product=iron ABC transporter ATP-binding protein/permease IrtB;protein_id=WP_003900322.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1186188 1186358 . - . ID=gene-DKM08_RS05975;Name=DKM08_RS05975;end_range=1186358,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS05975;old_locus_tag=DKM08_05965;partial=true;pseudo=true;start_range=.,1186188 NZ_QFYX01000001.1 Protein Homology CDS 1186188 1186358 . - 0 ID=cds-DKM08_RS05975;Parent=gene-DKM08_RS05975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016627;end_range=1186358,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009952867.1;locus_tag=DKM08_RS05975;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,1186188;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1186324 1187067 . + . ID=gene-DKM08_RS05980;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=DKM08_RS05980;old_locus_tag=DKM08_05970 NZ_QFYX01000001.1 Protein Homology CDS 1186324 1187067 . + 0 ID=cds-WP_003406963.1;Parent=gene-DKM08_RS05980;Dbxref=GenBank:WP_003406963.1;Name=WP_003406963.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215866.1;locus_tag=DKM08_RS05980;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_003406963.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1187078 1187140 . + . ID=gene-DKM08_RS22500;Name=DKM08_RS22500;end_range=1187140,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22500;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1187078 1187140 . + 0 ID=cds-DKM08_RS22500;Parent=gene-DKM08_RS22500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1187140,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014790.6;locus_tag=DKM08_RS22500;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1187121 1187393 . + . ID=gene-DKM08_RS05985;Name=DKM08_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05985;old_locus_tag=DKM08_05975 NZ_QFYX01000001.1 Protein Homology CDS 1187121 1187393 . + 0 ID=cds-WP_003918231.1;Parent=gene-DKM08_RS05985;Dbxref=GenBank:WP_003918231.1;Name=WP_003918231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918231.1;locus_tag=DKM08_RS05985;product=hypothetical protein;protein_id=WP_003918231.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1187596 1187967 . + . ID=gene-DKM08_RS05995;Name=DKM08_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS05995;old_locus_tag=DKM08_05985 NZ_QFYX01000001.1 Protein Homology CDS 1187596 1187967 . + 0 ID=cds-WP_003406967.1;Parent=gene-DKM08_RS05995;Dbxref=GenBank:WP_003406967.1;Name=WP_003406967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215868.1;locus_tag=DKM08_RS05995;product=hypothetical protein;protein_id=WP_003406967.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1188033 1188818 . - . ID=gene-DKM08_RS06000;Name=DKM08_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06000;old_locus_tag=DKM08_05990 NZ_QFYX01000001.1 Protein Homology CDS 1188033 1188818 . - 0 ID=cds-WP_003898836.1;Parent=gene-DKM08_RS06000;Dbxref=GenBank:WP_003898836.1;Name=WP_003898836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215869.1;locus_tag=DKM08_RS06000;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003898836.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1188838 1190709 . - . ID=gene-DKM08_RS06005;Name=DKM08_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06005;old_locus_tag=DKM08_05995 NZ_QFYX01000001.1 Protein Homology CDS 1188838 1190709 . - 0 ID=cds-WP_003898837.1;Parent=gene-DKM08_RS06005;Dbxref=GenBank:WP_003898837.1;Name=WP_003898837.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215870.1;locus_tag=DKM08_RS06005;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_003898837.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1190718 1192865 . - . ID=gene-DKM08_RS06010;Name=moeY;gbkey=Gene;gene=moeY;gene_biotype=protein_coding;locus_tag=DKM08_RS06010;old_locus_tag=DKM08_06000 NZ_QFYX01000001.1 Protein Homology CDS 1190718 1192865 . - 0 ID=cds-WP_003909410.1;Parent=gene-DKM08_RS06010;Dbxref=GenBank:WP_003909410.1;Name=WP_003909410.1;Ontology_term=GO:0016491;gbkey=CDS;gene=moeY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215871.1;locus_tag=DKM08_RS06010;product=Rv1355c family protein;protein_id=WP_003909410.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1192862 1193617 . - . ID=gene-DKM08_RS06015;Name=DKM08_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06015;old_locus_tag=DKM08_06005 NZ_QFYX01000001.1 Protein Homology CDS 1192862 1193617 . - 0 ID=cds-WP_003911502.1;Parent=gene-DKM08_RS06015;Dbxref=GenBank:WP_003911502.1;Name=WP_003911502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911502.1;locus_tag=DKM08_RS06015;product=hypothetical protein;protein_id=WP_003911502.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1194126 1195049 . - . ID=gene-DKM08_RS06020;Name=DKM08_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06020;old_locus_tag=DKM08_06010 NZ_QFYX01000001.1 Protein Homology CDS 1194126 1195049 . - 0 ID=cds-WP_003406987.1;Parent=gene-DKM08_RS06020;Dbxref=GenBank:WP_003406987.1;Name=WP_003406987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215873.1;locus_tag=DKM08_RS06020;product=cyclic diguanylate phosphodiesterase;protein_id=WP_003406987.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1195069 1195209 . - . ID=gene-DKM08_RS21535;Name=DKM08_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21535 NZ_QFYX01000001.1 Protein Homology CDS 1195069 1195209 . - 0 ID=cds-WP_003406990.1;Parent=gene-DKM08_RS21535;Dbxref=GenBank:WP_003406990.1;Name=WP_003406990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940161.1;locus_tag=DKM08_RS21535;product=hypothetical protein;protein_id=WP_003406990.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1195445 1198924 . + . ID=gene-DKM08_RS06025;Name=DKM08_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06025;old_locus_tag=DKM08_06015 NZ_QFYX01000001.1 Protein Homology CDS 1195445 1198924 . + 0 ID=cds-WP_011799172.1;Parent=gene-DKM08_RS06025;Dbxref=GenBank:WP_011799172.1;Name=WP_011799172.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215874.1;locus_tag=DKM08_RS06025;product=helix-turn-helix transcriptional regulator;protein_id=WP_011799172.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1199120 1199758 . + . ID=gene-DKM08_RS06030;Name=DKM08_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06030;old_locus_tag=DKM08_06020 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 1199120 1199758 . + 0 ID=cds-WP_194164305.1;Parent=gene-DKM08_RS06030;Dbxref=GenBank:WP_194164305.1;Name=WP_194164305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS06030;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_194164305.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1199806 1200042 . - . ID=gene-DKM08_RS06035;Name=DKM08_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06035;old_locus_tag=DKM08_06025 NZ_QFYX01000001.1 Protein Homology CDS 1199806 1200042 . - 0 ID=cds-WP_003407054.1;Parent=gene-DKM08_RS06035;Dbxref=GenBank:WP_003407054.1;Name=WP_003407054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627344.1;locus_tag=DKM08_RS06035;product=hypothetical protein;protein_id=WP_003407054.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1200181 1201203 . + . ID=gene-DKM08_RS06040;Name=DKM08_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06040;old_locus_tag=DKM08_06030 NZ_QFYX01000001.1 Protein Homology CDS 1200181 1201203 . + 0 ID=cds-WP_003898842.1;Parent=gene-DKM08_RS06040;Dbxref=GenBank:WP_003898842.1;Name=WP_003898842.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215876.1;locus_tag=DKM08_RS06040;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003898842.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1201276 1202466 . - . ID=gene-DKM08_RS06045;Name=DKM08_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06045;old_locus_tag=DKM08_06035 NZ_QFYX01000001.1 Protein Homology CDS 1201276 1202466 . - 0 ID=cds-WP_011799173.1;Parent=gene-DKM08_RS06045;Dbxref=GenBank:WP_011799173.1;Name=WP_011799173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177801.1;locus_tag=DKM08_RS06045;product=PPE family protein;protein_id=WP_011799173.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1202781 1203443 . - . ID=gene-DKM08_RS06050;Name=DKM08_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06050;old_locus_tag=DKM08_06040 NZ_QFYX01000001.1 Protein Homology CDS 1202781 1203443 . - 0 ID=cds-WP_010950531.1;Parent=gene-DKM08_RS06050;Dbxref=GenBank:WP_010950531.1;Name=WP_010950531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215878.1;locus_tag=DKM08_RS06050;product=hypothetical protein;protein_id=WP_010950531.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1203440 1204225 . - . ID=gene-DKM08_RS06055;Name=DKM08_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06055;old_locus_tag=DKM08_06045 NZ_QFYX01000001.1 Protein Homology CDS 1203440 1204225 . - 0 ID=cds-WP_010950532.1;Parent=gene-DKM08_RS06055;Dbxref=GenBank:WP_010950532.1;Name=WP_010950532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215879.1;locus_tag=DKM08_RS06055;product=hypothetical protein;protein_id=WP_010950532.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1204516 1206477 . - . ID=gene-DKM08_RS06060;Name=DKM08_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06060;old_locus_tag=DKM08_06050 NZ_QFYX01000001.1 Protein Homology CDS 1204516 1206477 . - 0 ID=cds-WP_010950533.1;Parent=gene-DKM08_RS06060;Dbxref=GenBank:WP_010950533.1;Name=WP_010950533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177802.1;locus_tag=DKM08_RS06060;product=sigma-F factor regulator;protein_id=WP_010950533.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1206616 1207002 . - . ID=gene-DKM08_RS06065;Name=rsfA;gbkey=Gene;gene=rsfA;gene_biotype=protein_coding;locus_tag=DKM08_RS06065;old_locus_tag=DKM08_06055 NZ_QFYX01000001.1 Protein Homology CDS 1206616 1207002 . - 0 ID=cds-WP_003407162.1;Parent=gene-DKM08_RS06065;Dbxref=GenBank:WP_003407162.1;Name=WP_003407162.1;gbkey=CDS;gene=rsfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215881.1;locus_tag=DKM08_RS06065;product=anti-sigma-F factor antagonist RsfA;protein_id=WP_003407162.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1207223 1208044 . + . ID=gene-DKM08_RS06070;Name=DKM08_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06070;old_locus_tag=DKM08_06060 NZ_QFYX01000001.1 Protein Homology CDS 1207223 1208044 . + 0 ID=cds-WP_003407164.1;Parent=gene-DKM08_RS06070;Dbxref=GenBank:WP_003407164.1;Name=WP_003407164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215882.1;locus_tag=DKM08_RS06070;product=GTP pyrophosphokinase;protein_id=WP_003407164.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1208037 1208273 . + . ID=gene-DKM08_RS06075;Name=DKM08_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06075;old_locus_tag=DKM08_06065 NZ_QFYX01000001.1 Protein Homology CDS 1208037 1208273 . + 0 ID=cds-WP_003407167.1;Parent=gene-DKM08_RS06075;Dbxref=GenBank:WP_003407167.1;Name=WP_003407167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407167.1;locus_tag=DKM08_RS06075;product=hypothetical protein;protein_id=WP_003407167.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1208345 1209550 . - . ID=gene-DKM08_RS06080;Name=DKM08_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06080;old_locus_tag=DKM08_06070 NZ_QFYX01000001.1 Protein Homology CDS 1208345 1209550 . - 0 ID=cds-WP_003918234.1;Parent=gene-DKM08_RS06080;Dbxref=GenBank:WP_003918234.1;Name=WP_003918234.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355830.1;locus_tag=DKM08_RS06080;product=serine hydrolase domain-containing protein;protein_id=WP_003918234.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1209853 1210638 . + . ID=gene-DKM08_RS06085;Name=lprF;gbkey=Gene;gene=lprF;gene_biotype=protein_coding;locus_tag=DKM08_RS06085;old_locus_tag=DKM08_06075 NZ_QFYX01000001.1 Protein Homology CDS 1209853 1210638 . + 0 ID=cds-WP_003407180.1;Parent=gene-DKM08_RS06085;Dbxref=GenBank:WP_003407180.1;Name=WP_003407180.1;gbkey=CDS;gene=lprF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215884.1;locus_tag=DKM08_RS06085;product=lipoprotein LprF;protein_id=WP_003407180.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1210834 1212304 . + . ID=gene-DKM08_RS06095;Name=DKM08_RS06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS06095;old_locus_tag=DKM08_06085;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1210834 1212304 . + 0 ID=cds-DKM08_RS06095;Parent=gene-DKM08_RS06095;Note=frameshifted;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215887.1;locus_tag=DKM08_RS06095;product=fatty acid desaturase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1212301 1213482 . + . ID=gene-DKM08_RS06100;Name=DKM08_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06100;old_locus_tag=DKM08_06090 NZ_QFYX01000001.1 Protein Homology CDS 1212301 1213482 . + 0 ID=cds-WP_023349503.1;Parent=gene-DKM08_RS06100;Dbxref=GenBank:WP_023349503.1;Name=WP_023349503.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177803.1;locus_tag=DKM08_RS06100;product=type III polyketide synthase;protein_id=WP_023349503.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1213488 1214469 . + . ID=gene-DKM08_RS06105;Name=DKM08_RS06105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS06105;old_locus_tag=DKM08_06095;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1213488 1214469 . + 0 ID=cds-DKM08_RS06105;Parent=gene-DKM08_RS06105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215889.1;locus_tag=DKM08_RS06105;product=glycolipid sulfotransferase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1214549 1215007 . - . ID=gene-DKM08_RS06110;Name=DKM08_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06110;old_locus_tag=DKM08_06100 NZ_QFYX01000001.1 Protein Homology CDS 1214549 1215007 . - 0 ID=cds-WP_003901145.1;Parent=gene-DKM08_RS06110;Dbxref=GenBank:WP_003901145.1;Name=WP_003901145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215890.2;locus_tag=DKM08_RS06110;product=hypothetical protein;protein_id=WP_003901145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1215309 1216628 . + . ID=gene-DKM08_RS06115;Name=DKM08_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06115;old_locus_tag=DKM08_06105 NZ_QFYX01000001.1 Protein Homology CDS 1215309 1216628 . + 0 ID=cds-WP_010950535.1;Parent=gene-DKM08_RS06115;Dbxref=GenBank:WP_010950535.1;Name=WP_010950535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215891.1;locus_tag=DKM08_RS06115;product=YcaO-like family protein;protein_id=WP_010950535.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1216625 1218118 . + . ID=gene-DKM08_RS06120;Name=DKM08_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06120;old_locus_tag=DKM08_06110 NZ_QFYX01000001.1 Protein Homology CDS 1216625 1218118 . + 0 ID=cds-WP_003910339.1;Parent=gene-DKM08_RS06120;Dbxref=GenBank:WP_003910339.1;Name=WP_003910339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215892.1;locus_tag=DKM08_RS06120;product=TfuA-like protein;protein_id=WP_003910339.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1218056 1218694 . - . ID=gene-DKM08_RS06125;Name=DKM08_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06125;old_locus_tag=DKM08_06115 NZ_QFYX01000001.1 Protein Homology CDS 1218056 1218694 . - 0 ID=cds-WP_003898852.1;Parent=gene-DKM08_RS06125;Dbxref=GenBank:WP_003898852.1;Name=WP_003898852.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215893.1;locus_tag=DKM08_RS06125;product=class I SAM-dependent methyltransferase;protein_id=WP_003898852.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1218705 1219994 . - . ID=gene-DKM08_RS06130;Name=DKM08_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06130;old_locus_tag=DKM08_06120 NZ_QFYX01000001.1 Protein Homology CDS 1218705 1219994 . - 0 ID=cds-WP_003911527.1;Parent=gene-DKM08_RS06130;Dbxref=GenBank:WP_003911527.1;Name=WP_003911527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911527.1;locus_tag=DKM08_RS06130;product=HNH endonuclease;protein_id=WP_003911527.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1220131 1220712 . + . ID=gene-DKM08_RS06135;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=DKM08_RS06135;old_locus_tag=DKM08_06125 NZ_QFYX01000001.1 Protein Homology CDS 1220131 1220712 . + 0 ID=cds-WP_003407196.1;Parent=gene-DKM08_RS06135;Dbxref=GenBank:WP_003407196.1;Name=WP_003407196.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215895.1;locus_tag=DKM08_RS06135;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_003407196.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1220709 1221668 . + . ID=gene-DKM08_RS06140;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=DKM08_RS06140;old_locus_tag=DKM08_06130 NZ_QFYX01000001.1 Protein Homology CDS 1220709 1221668 . + 0 ID=cds-WP_003407200.1;Parent=gene-DKM08_RS06140;Dbxref=GenBank:WP_003407200.1;Name=WP_003407200.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215896.1;locus_tag=DKM08_RS06140;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_003407200.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1221665 1222957 . + . ID=gene-DKM08_RS06145;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=DKM08_RS06145;old_locus_tag=DKM08_06135 NZ_QFYX01000001.1 Protein Homology CDS 1221665 1222957 . + 0 ID=cds-WP_010950537.1;Parent=gene-DKM08_RS06145;Dbxref=GenBank:WP_010950537.1;Name=WP_010950537.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215897.1;locus_tag=DKM08_RS06145;product=dihydroorotase;protein_id=WP_010950537.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1222954 1223451 . + . ID=gene-DKM08_RS06150;Name=DKM08_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06150;old_locus_tag=DKM08_06140 NZ_QFYX01000001.1 Protein Homology CDS 1222954 1223451 . + 0 ID=cds-WP_003898853.1;Parent=gene-DKM08_RS06150;Dbxref=GenBank:WP_003898853.1;Name=WP_003898853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215898.1;locus_tag=DKM08_RS06150;product=hypothetical protein;protein_id=WP_003898853.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1223448 1224578 . + . ID=gene-DKM08_RS06155;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=DKM08_RS06155;old_locus_tag=DKM08_06145 NZ_QFYX01000001.1 Protein Homology CDS 1223448 1224578 . + 0 ID=cds-WP_010950538.1;Parent=gene-DKM08_RS06155;Dbxref=GenBank:WP_010950538.1;Name=WP_010950538.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215899.1;locus_tag=DKM08_RS06155;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_010950538.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1224578 1227925 . + . ID=gene-DKM08_RS06160;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DKM08_RS06160;old_locus_tag=DKM08_06150 NZ_QFYX01000001.1 Protein Homology CDS 1224578 1227925 . + 0 ID=cds-WP_003407211.1;Parent=gene-DKM08_RS06160;Dbxref=GenBank:WP_003407211.1;Name=WP_003407211.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177804.1;locus_tag=DKM08_RS06160;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_003407211.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1227922 1228746 . + . ID=gene-DKM08_RS06165;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=DKM08_RS06165;old_locus_tag=DKM08_06155 NZ_QFYX01000001.1 Protein Homology CDS 1227922 1228746 . + 0 ID=cds-WP_003407220.1;Parent=gene-DKM08_RS06165;Dbxref=GenBank:WP_003407220.1;Name=WP_003407220.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215901.1;locus_tag=DKM08_RS06165;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_003407220.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1228941 1229249 . + . ID=gene-DKM08_RS06170;Name=DKM08_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06170;old_locus_tag=DKM08_06160 NZ_QFYX01000001.1 Protein Homology CDS 1228941 1229249 . + 0 ID=cds-WP_003407225.1;Parent=gene-DKM08_RS06170;Dbxref=GenBank:WP_003407225.1;Name=WP_003407225.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177805.1;locus_tag=DKM08_RS06170;product=PE family protein;protein_id=WP_003407225.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1229246 1230865 . + . ID=gene-DKM08_RS06175;Name=DKM08_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06175;old_locus_tag=DKM08_06165 NZ_QFYX01000001.1 Protein Homology CDS 1229246 1230865 . + 0 ID=cds-WP_010950539.1;Parent=gene-DKM08_RS06175;Dbxref=GenBank:WP_010950539.1;Name=WP_010950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177806.1;locus_tag=DKM08_RS06175;product=PPE family protein;protein_id=WP_010950539.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1231426 1231743 . + . ID=gene-DKM08_RS06185;Name=mihF;gbkey=Gene;gene=mihF;gene_biotype=protein_coding;locus_tag=DKM08_RS06185;old_locus_tag=DKM08_06175 NZ_QFYX01000001.1 Protein Homology CDS 1231426 1231743 . + 0 ID=cds-WP_003407240.1;Parent=gene-DKM08_RS06185;Dbxref=GenBank:WP_003407240.1;Name=WP_003407240.1;gbkey=CDS;gene=mihF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907783.1;locus_tag=DKM08_RS06185;product=integration host factor%2C actinobacterial type;protein_id=WP_003407240.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1231878 1232504 . + . ID=gene-DKM08_RS06190;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=DKM08_RS06190;old_locus_tag=DKM08_06180 NZ_QFYX01000001.1 Protein Homology CDS 1231878 1232504 . + 0 ID=cds-WP_003900331.1;Parent=gene-DKM08_RS06190;Dbxref=GenBank:WP_003900331.1;Name=WP_003900331.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215905.1;locus_tag=DKM08_RS06190;product=guanylate kinase;protein_id=WP_003900331.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1232570 1232902 . + . ID=gene-DKM08_RS06195;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=DKM08_RS06195;old_locus_tag=DKM08_06185 NZ_QFYX01000001.1 Protein Homology CDS 1232570 1232902 . + 0 ID=cds-WP_023349504.1;Parent=gene-DKM08_RS06195;Dbxref=GenBank:WP_023349504.1;Name=WP_023349504.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215906.1;locus_tag=DKM08_RS06195;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_023349504.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1232918 1234174 . + . ID=gene-DKM08_RS06200;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=DKM08_RS06200;old_locus_tag=DKM08_06190 NZ_QFYX01000001.1 Protein Homology CDS 1232918 1234174 . + 0 ID=cds-WP_003898859.1;Parent=gene-DKM08_RS06200;Dbxref=GenBank:WP_003898859.1;Name=WP_003898859.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215907.1;locus_tag=DKM08_RS06200;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_003898859.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1234302 1235513 . + . ID=gene-DKM08_RS06205;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=DKM08_RS06205;old_locus_tag=DKM08_06195 NZ_QFYX01000001.1 Protein Homology CDS 1234302 1235513 . + 0 ID=cds-WP_003900333.1;Parent=gene-DKM08_RS06205;Dbxref=GenBank:WP_003900333.1;Name=WP_003900333.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393969.1;locus_tag=DKM08_RS06205;product=methionine adenosyltransferase;protein_id=WP_003900333.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1235586 1237064 . - . ID=gene-DKM08_RS06210;Name=DKM08_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06210;old_locus_tag=DKM08_06200 NZ_QFYX01000001.1 Protein Homology CDS 1235586 1237064 . - 0 ID=cds-WP_003407257.1;Parent=gene-DKM08_RS06210;Dbxref=GenBank:WP_003407257.1;Name=WP_003407257.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215909.1;locus_tag=DKM08_RS06210;product=flavin-containing monooxygenase;protein_id=WP_003407257.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1237061 1238446 . - . ID=gene-DKM08_RS06215;Name=DKM08_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06215;old_locus_tag=DKM08_06205 NZ_QFYX01000001.1 Protein Homology CDS 1237061 1238446 . - 0 ID=cds-WP_003407260.1;Parent=gene-DKM08_RS06215;Dbxref=GenBank:WP_003407260.1;Name=WP_003407260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177807.1;locus_tag=DKM08_RS06215;product=cytochrome P450;protein_id=WP_003407260.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1238524 1239558 . + . ID=gene-DKM08_RS06220;Name=DKM08_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06220;old_locus_tag=DKM08_06210 NZ_QFYX01000001.1 Protein Homology CDS 1238524 1239558 . + 0 ID=cds-WP_003407264.1;Parent=gene-DKM08_RS06220;Dbxref=GenBank:WP_003407264.1;Name=WP_003407264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177808.1;locus_tag=DKM08_RS06220;product=AraC family transcriptional regulator;protein_id=WP_003407264.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1239604 1240962 . - . ID=gene-DKM08_RS06225;Name=DKM08_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06225;old_locus_tag=DKM08_06215 NZ_QFYX01000001.1 Protein Homology CDS 1239604 1240962 . - 0 ID=cds-WP_147020889.1;Parent=gene-DKM08_RS06225;Dbxref=GenBank:WP_147020889.1;Name=WP_147020889.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177809.1;locus_tag=DKM08_RS06225;product=PE family protein;protein_id=WP_147020889.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1241217 1241618 . - . ID=gene-DKM08_RS06230;Name=DKM08_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06230;old_locus_tag=DKM08_06220 NZ_QFYX01000001.1 Protein Homology CDS 1241217 1241618 . - 0 ID=cds-WP_003407268.1;Parent=gene-DKM08_RS06230;Dbxref=GenBank:WP_003407268.1;Name=WP_003407268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215913.1;locus_tag=DKM08_RS06230;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003407268.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1241615 1241872 . - . ID=gene-DKM08_RS06235;Name=DKM08_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06235;old_locus_tag=DKM08_06225 NZ_QFYX01000001.1 Protein Homology CDS 1241615 1241872 . - 0 ID=cds-WP_003407272.1;Parent=gene-DKM08_RS06235;Dbxref=GenBank:WP_003407272.1;Name=WP_003407272.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215914.1;locus_tag=DKM08_RS06235;product=CopG family transcriptional regulator;protein_id=WP_003407272.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1241955 1242914 . - . ID=gene-DKM08_RS06240;Name=nlhH;gbkey=Gene;gene=nlhH;gene_biotype=protein_coding;locus_tag=DKM08_RS06240;old_locus_tag=DKM08_06230 NZ_QFYX01000001.1 Protein Homology CDS 1241955 1242914 . - 0 ID=cds-WP_003407276.1;Parent=gene-DKM08_RS06240;Dbxref=GenBank:WP_003407276.1;Name=WP_003407276.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nlhH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215915.1;locus_tag=DKM08_RS06240;product=alpha/beta hydrolase;protein_id=WP_003407276.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1242939 1243901 . - . ID=gene-DKM08_RS06245;Name=lipI;gbkey=Gene;gene=lipI;gene_biotype=protein_coding;locus_tag=DKM08_RS06245;old_locus_tag=DKM08_06235 NZ_QFYX01000001.1 Protein Homology CDS 1242939 1243901 . - 0 ID=cds-WP_003407279.1;Parent=gene-DKM08_RS06245;Dbxref=GenBank:WP_003407279.1;Name=WP_003407279.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipI;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215916.1;locus_tag=DKM08_RS06245;product=alpha/beta hydrolase;protein_id=WP_003407279.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1243852 1244637 . + . ID=gene-DKM08_RS06250;Name=DKM08_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06250;old_locus_tag=DKM08_06240 NZ_QFYX01000001.1 Protein Homology CDS 1243852 1244637 . + 0 ID=cds-WP_003898862.1;Parent=gene-DKM08_RS06250;Dbxref=GenBank:WP_003898862.1;Name=WP_003898862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898862.1;locus_tag=DKM08_RS06250;product=lysoplasmalogenase;protein_id=WP_003898862.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1244718 1246685 . + . ID=gene-DKM08_RS06255;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=DKM08_RS06255;old_locus_tag=DKM08_06245 NZ_QFYX01000001.1 Protein Homology CDS 1244718 1246685 . + 0 ID=cds-WP_003407285.1;Parent=gene-DKM08_RS06255;Dbxref=GenBank:WP_003407285.1;Name=WP_003407285.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013829229.1;locus_tag=DKM08_RS06255;product=primosomal protein N';protein_id=WP_003407285.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1246703 1247527 . - . ID=gene-DKM08_RS06260;Name=DKM08_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06260;old_locus_tag=DKM08_06250 NZ_QFYX01000001.1 Protein Homology CDS 1246703 1247527 . - 0 ID=cds-WP_003407292.1;Parent=gene-DKM08_RS06260;Dbxref=GenBank:WP_003407292.1;Name=WP_003407292.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215919.1;locus_tag=DKM08_RS06260;product=class I SAM-dependent methyltransferase;protein_id=WP_003407292.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1247696 1248178 . + . ID=gene-DKM08_RS06265;Name=DKM08_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06265;old_locus_tag=DKM08_06255 NZ_QFYX01000001.1 Protein Homology CDS 1247696 1248178 . + 0 ID=cds-WP_003407295.1;Parent=gene-DKM08_RS06265;Dbxref=GenBank:WP_003407295.1;Name=WP_003407295.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215920.1;locus_tag=DKM08_RS06265;product=MarR family transcriptional regulator;protein_id=WP_003407295.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1248250 1249074 . - . ID=gene-DKM08_RS06270;Name=DKM08_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06270;old_locus_tag=DKM08_06260 NZ_QFYX01000001.1 Protein Homology CDS 1248250 1249074 . - 0 ID=cds-WP_003407297.1;Parent=gene-DKM08_RS06270;Dbxref=GenBank:WP_003407297.1;Name=WP_003407297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215921.1;locus_tag=DKM08_RS06270;product=virulence-associated methyltransferase;protein_id=WP_003407297.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1249271 1250209 . + . ID=gene-DKM08_RS06275;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=DKM08_RS06275;old_locus_tag=DKM08_06265 NZ_QFYX01000001.1 Protein Homology CDS 1249271 1250209 . + 0 ID=cds-WP_003900336.1;Parent=gene-DKM08_RS06275;Dbxref=GenBank:WP_003900336.1;Name=WP_003900336.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215922.1;locus_tag=DKM08_RS06275;product=methionyl-tRNA formyltransferase;protein_id=WP_003900336.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1250206 1251579 . + . ID=gene-DKM08_RS06280;Name=fmu;gbkey=Gene;gene=fmu;gene_biotype=protein_coding;locus_tag=DKM08_RS06280;old_locus_tag=DKM08_06270 NZ_QFYX01000001.1 Protein Homology CDS 1250206 1251579 . + 0 ID=cds-WP_003407303.1;Parent=gene-DKM08_RS06280;Dbxref=GenBank:WP_003407303.1;Name=WP_003407303.1;gbkey=CDS;gene=fmu;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215923.1;locus_tag=DKM08_RS06280;product=16S rRNA m5C967 methyltransferase;protein_id=WP_003407303.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1251604 1252302 . + . ID=gene-DKM08_RS06285;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=DKM08_RS06285;old_locus_tag=DKM08_06275 NZ_QFYX01000001.1 Protein Homology CDS 1251604 1252302 . + 0 ID=cds-WP_003901153.1;Parent=gene-DKM08_RS06285;Dbxref=GenBank:WP_003901153.1;Name=WP_003901153.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215924.1;locus_tag=DKM08_RS06285;product=ribulose-phosphate 3-epimerase;protein_id=WP_003901153.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1252299 1253318 . + . ID=gene-DKM08_RS06290;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=DKM08_RS06290;old_locus_tag=DKM08_06280 NZ_QFYX01000001.1 Protein Homology CDS 1252299 1253318 . + 0 ID=cds-WP_003407308.1;Parent=gene-DKM08_RS06290;Dbxref=GenBank:WP_003407308.1;Name=WP_003407308.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215925.1;locus_tag=DKM08_RS06290;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_003407308.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1253315 1254871 . - . ID=gene-DKM08_RS06295;Name=DKM08_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06295;old_locus_tag=DKM08_06285 NZ_QFYX01000001.1 Protein Homology CDS 1253315 1254871 . - 0 ID=cds-WP_003407310.1;Parent=gene-DKM08_RS06295;Dbxref=GenBank:WP_003407310.1;Name=WP_003407310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215926.1;locus_tag=DKM08_RS06295;product=aminoglycoside/tetracycline transporter;protein_id=WP_003407310.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1254877 1255587 . - . ID=gene-DKM08_RS06300;Name=lprG;gbkey=Gene;gene=lprG;gene_biotype=protein_coding;locus_tag=DKM08_RS06300;old_locus_tag=DKM08_06290 NZ_QFYX01000001.1 Protein Homology CDS 1254877 1255587 . - 0 ID=cds-WP_003407315.1;Parent=gene-DKM08_RS06300;Dbxref=GenBank:WP_003407315.1;Name=WP_003407315.1;gbkey=CDS;gene=lprG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215927.1;locus_tag=DKM08_RS06300;product=lipoarabinomannan carrier protein LprG;protein_id=WP_003407315.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1255672 1256277 . + . ID=gene-DKM08_RS06305;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;locus_tag=DKM08_RS06305;old_locus_tag=DKM08_06295 NZ_QFYX01000001.1 Protein Homology CDS 1255672 1256277 . + 0 ID=cds-WP_003407318.1;Parent=gene-DKM08_RS06305;Dbxref=GenBank:WP_003407318.1;Name=WP_003407318.1;gbkey=CDS;gene=ribC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215928.1;locus_tag=DKM08_RS06305;product=riboflavin synthase;protein_id=WP_003407318.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1256304 1257397 . + . ID=gene-DKM08_RS21540;Name=DKM08_RS21540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21540;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1256304 1257397 . + 0 ID=cds-DKM08_RS21540;Parent=gene-DKM08_RS21540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292928.1;locus_tag=DKM08_RS21540;product=alanine racemase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1257502 1258779 . + . ID=gene-DKM08_RS06320;Name=DKM08_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06320;old_locus_tag=DKM08_06310 NZ_QFYX01000001.1 Protein Homology CDS 1257502 1258779 . + 0 ID=cds-WP_003407334.1;Parent=gene-DKM08_RS06320;Dbxref=GenBank:WP_003407334.1;Name=WP_003407334.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215931.1;locus_tag=DKM08_RS06320;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_003407334.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1258776 1259258 . + . ID=gene-DKM08_RS06325;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=DKM08_RS06325;old_locus_tag=DKM08_06315 NZ_QFYX01000001.1 Protein Homology CDS 1258776 1259258 . + 0 ID=cds-WP_003898872.1;Parent=gene-DKM08_RS06325;Dbxref=GenBank:WP_003898872.1;Name=WP_003898872.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215932.2;locus_tag=DKM08_RS06325;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_003898872.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1259255 1259719 . + . ID=gene-DKM08_RS06330;Name=DKM08_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06330;old_locus_tag=DKM08_06320 NZ_QFYX01000001.1 Protein Homology CDS 1259255 1259719 . + 0 ID=cds-WP_003407340.1;Parent=gene-DKM08_RS06330;Dbxref=GenBank:WP_003407340.1;Name=WP_003407340.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215933.1;locus_tag=DKM08_RS06330;product=PH domain-containing protein;protein_id=WP_003407340.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1259744 1260430 . + . ID=gene-DKM08_RS06335;Name=DKM08_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06335;old_locus_tag=DKM08_06325 NZ_QFYX01000001.1 Protein Homology CDS 1259744 1260430 . + 0 ID=cds-WP_003407343.1;Parent=gene-DKM08_RS06335;Dbxref=GenBank:WP_003407343.1;Name=WP_003407343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215934.1;locus_tag=DKM08_RS06335;product=hypothetical protein;protein_id=WP_003407343.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1260610 1261083 . + . ID=gene-DKM08_RS06340;Name=DKM08_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06340;old_locus_tag=DKM08_06330 NZ_QFYX01000001.1 Protein Homology CDS 1260610 1261083 . + 0 ID=cds-WP_003407345.1;Parent=gene-DKM08_RS06340;Dbxref=GenBank:WP_003407345.1;Name=WP_003407345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215935.1;locus_tag=DKM08_RS06340;product=lectin;protein_id=WP_003407345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1261147 1263087 . + . ID=gene-DKM08_RS06345;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=DKM08_RS06345;old_locus_tag=DKM08_06335 NZ_QFYX01000001.1 Protein Homology CDS 1261147 1263087 . + 0 ID=cds-WP_003407347.1;Parent=gene-DKM08_RS06345;Dbxref=GenBank:WP_003407347.1;Name=WP_003407347.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215936.1;locus_tag=DKM08_RS06345;product=excinuclease ABC subunit UvrC;protein_id=WP_003407347.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1263084 1263989 . + . ID=gene-DKM08_RS06350;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=DKM08_RS06350;old_locus_tag=DKM08_06340 NZ_QFYX01000001.1 Protein Homology CDS 1263084 1263989 . + 0 ID=cds-WP_003898873.1;Parent=gene-DKM08_RS06350;Dbxref=GenBank:WP_003898873.1;Name=WP_003898873.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215937.1;locus_tag=DKM08_RS06350;product=RNase adapter RapZ;protein_id=WP_003898873.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1263986 1265014 . + . ID=gene-DKM08_RS06355;Name=cuvA;gbkey=Gene;gene=cuvA;gene_biotype=protein_coding;locus_tag=DKM08_RS06355;old_locus_tag=DKM08_06345 NZ_QFYX01000001.1 Protein Homology CDS 1263986 1265014 . + 0 ID=cds-WP_010950542.1;Parent=gene-DKM08_RS06355;Dbxref=GenBank:WP_010950542.1;Name=WP_010950542.1;gbkey=CDS;gene=cuvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215938.1;locus_tag=DKM08_RS06355;product=carbon utilization/virulence protein CuvA;protein_id=WP_010950542.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1265011 1265988 . + . ID=gene-DKM08_RS06360;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=DKM08_RS06360;old_locus_tag=DKM08_06350 NZ_QFYX01000001.1 Protein Homology CDS 1265011 1265988 . + 0 ID=cds-WP_003901156.1;Parent=gene-DKM08_RS06360;Dbxref=GenBank:WP_003901156.1;Name=WP_003901156.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215939.1;locus_tag=DKM08_RS06360;product=DNA-binding protein WhiA;protein_id=WP_003901156.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1265998 1266759 . - . ID=gene-DKM08_RS06365;Name=DKM08_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06365;old_locus_tag=DKM08_06355 NZ_QFYX01000001.1 Protein Homology CDS 1265998 1266759 . - 0 ID=cds-WP_003407359.1;Parent=gene-DKM08_RS06365;Dbxref=GenBank:WP_003407359.1;Name=WP_003407359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215940.1;locus_tag=DKM08_RS06365;product=membrane protein;protein_id=WP_003407359.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1266763 1268142 . + . ID=gene-DKM08_RS06370;Name=DKM08_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06370;old_locus_tag=DKM08_06360 NZ_QFYX01000001.1 Protein Homology CDS 1266763 1268142 . + 0 ID=cds-WP_003407366.1;Parent=gene-DKM08_RS06370;Dbxref=GenBank:WP_003407366.1;Name=WP_003407366.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215941.1;locus_tag=DKM08_RS06370;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003407366.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1268164 1269426 . - . ID=gene-DKM08_RS06375;Name=lipO;gbkey=Gene;gene=lipO;gene_biotype=protein_coding;locus_tag=DKM08_RS06375;old_locus_tag=DKM08_06365 NZ_QFYX01000001.1 Protein Homology CDS 1268164 1269426 . - 0 ID=cds-WP_003407371.1;Parent=gene-DKM08_RS06375;Dbxref=GenBank:WP_003407371.1;Name=WP_003407371.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipO;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215942.1;locus_tag=DKM08_RS06375;product=alpha/beta hydrolase;protein_id=WP_003407371.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1269426 1271033 . - . ID=gene-DKM08_RS06380;Name=fadD12;gbkey=Gene;gene=fadD12;gene_biotype=protein_coding;locus_tag=DKM08_RS06380;old_locus_tag=DKM08_06370 NZ_QFYX01000001.1 Protein Homology CDS 1269426 1271033 . - 0 ID=cds-WP_003898876.1;Parent=gene-DKM08_RS06380;Dbxref=GenBank:WP_003898876.1;Name=WP_003898876.1;gbkey=CDS;gene=fadD12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215943.1;locus_tag=DKM08_RS06380;product=acyl-CoA ligase FadD12;protein_id=WP_003898876.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1271037 1271864 . - . ID=gene-DKM08_RS06385;Name=DKM08_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06385;old_locus_tag=DKM08_06375 NZ_QFYX01000001.1 Protein Homology CDS 1271037 1271864 . - 0 ID=cds-WP_003407374.1;Parent=gene-DKM08_RS06385;Dbxref=GenBank:WP_003407374.1;Name=WP_003407374.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215944.1;locus_tag=DKM08_RS06385;product=lysophospholipid acyltransferase family protein;protein_id=WP_003407374.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1271983 1273251 . + . ID=gene-DKM08_RS06390;Name=DKM08_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06390;old_locus_tag=DKM08_06380 NZ_QFYX01000001.1 Protein Homology CDS 1271983 1273251 . + 0 ID=cds-WP_003407376.1;Parent=gene-DKM08_RS06390;Dbxref=GenBank:WP_003407376.1;Name=WP_003407376.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215945.1;locus_tag=DKM08_RS06390;product=PucR family transcriptional regulator;protein_id=WP_003407376.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1273491 1275077 . + . ID=gene-DKM08_RS06395;Name=DKM08_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06395;old_locus_tag=DKM08_06385 NZ_QFYX01000001.1 Protein Homology CDS 1273491 1275077 . + 0 ID=cds-WP_003407378.1;Parent=gene-DKM08_RS06395;Dbxref=GenBank:WP_003407378.1;Name=WP_003407378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177810.1;locus_tag=DKM08_RS06395;product=esterase PE16;protein_id=WP_003407378.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1275188 1276957 . + . ID=gene-DKM08_RS06400;Name=DKM08_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06400;old_locus_tag=DKM08_06390 NZ_QFYX01000001.1 Protein Homology CDS 1275188 1276957 . + 0 ID=cds-WP_003407380.1;Parent=gene-DKM08_RS06400;Dbxref=GenBank:WP_003407380.1;Name=WP_003407380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215947.1;locus_tag=DKM08_RS06400;product=DUF3556 domain-containing protein;protein_id=WP_003407380.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1276954 1278375 . + . ID=gene-DKM08_RS06405;Name=DKM08_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06405;old_locus_tag=DKM08_06395 NZ_QFYX01000001.1 Protein Homology CDS 1276954 1278375 . + 0 ID=cds-WP_003407382.1;Parent=gene-DKM08_RS06405;Dbxref=GenBank:WP_003407382.1;Name=WP_003407382.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215948.1;locus_tag=DKM08_RS06405;product=phytoene desaturase family protein;protein_id=WP_003407382.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1278539 1279354 . + . ID=gene-DKM08_RS06410;Name=ldtMt3;gbkey=Gene;gene=ldtMt3;gene_biotype=protein_coding;locus_tag=DKM08_RS06410;old_locus_tag=DKM08_06400 NZ_QFYX01000001.1 Protein Homology CDS 1278539 1279354 . + 0 ID=cds-WP_003407384.1;Parent=gene-DKM08_RS06410;Dbxref=GenBank:WP_003407384.1;Name=WP_003407384.1;gbkey=CDS;gene=ldtMt3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215949.1;locus_tag=DKM08_RS06410;product=L%2CD-transpeptidase LdtMt3;protein_id=WP_003407384.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1279361 1279498 . + . ID=gene-DKM08_RS06415;Name=DKM08_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06415;old_locus_tag=DKM08_06405 NZ_QFYX01000001.1 Protein Homology CDS 1279361 1279498 . + 0 ID=cds-WP_003908693.1;Parent=gene-DKM08_RS06415;Dbxref=GenBank:WP_003908693.1;Name=WP_003908693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215950.1;locus_tag=DKM08_RS06415;product=hypothetical protein;protein_id=WP_003908693.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1279447 1280076 . - . ID=gene-DKM08_RS06420;Name=DKM08_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06420;old_locus_tag=DKM08_06410 NZ_QFYX01000001.1 Protein Homology CDS 1279447 1280076 . - 0 ID=cds-WP_010950543.1;Parent=gene-DKM08_RS06420;Dbxref=GenBank:WP_010950543.1;Name=WP_010950543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215951.1;locus_tag=DKM08_RS06420;product=hypothetical protein;protein_id=WP_010950543.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1280433 1281452 . + . ID=gene-DKM08_RS06430;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=DKM08_RS06430;old_locus_tag=DKM08_06420 NZ_QFYX01000001.1 Protein Homology CDS 1280433 1281452 . + 0 ID=cds-WP_003407390.1;Parent=gene-DKM08_RS06430;Dbxref=GenBank:WP_003407390.1;Name=WP_003407390.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215952.1;locus_tag=DKM08_RS06430;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_003407390.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1281455 1282693 . + . ID=gene-DKM08_RS06435;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=DKM08_RS06435;old_locus_tag=DKM08_06425 NZ_QFYX01000001.1 Protein Homology CDS 1281455 1282693 . + 0 ID=cds-WP_003900339.1;Parent=gene-DKM08_RS06435;Dbxref=GenBank:WP_003900339.1;Name=WP_003900339.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;gene=pgk;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215953.1;locus_tag=DKM08_RS06435;product=phosphoglycerate kinase;protein_id=WP_003900339.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1282690 1283475 . + . ID=gene-DKM08_RS06440;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=DKM08_RS06440;old_locus_tag=DKM08_06430 NZ_QFYX01000001.1 Protein Homology CDS 1282690 1283475 . + 0 ID=cds-WP_003407398.1;Parent=gene-DKM08_RS06440;Dbxref=GenBank:WP_003407398.1;Name=WP_003407398.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215954.1;locus_tag=DKM08_RS06440;product=triose-phosphate isomerase;protein_id=WP_003407398.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1283491 1283718 . - . ID=gene-DKM08_RS06445;Name=DKM08_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06445;old_locus_tag=DKM08_06435 NZ_QFYX01000001.1 Protein Homology CDS 1283491 1283718 . - 0 ID=cds-WP_003407402.1;Parent=gene-DKM08_RS06445;Dbxref=GenBank:WP_003407402.1;Name=WP_003407402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407402.1;locus_tag=DKM08_RS06445;product=hypothetical protein;protein_id=WP_003407402.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1283694 1283825 . - . ID=gene-DKM08_RS22670;Name=DKM08_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22670 NZ_QFYX01000001.1 Protein Homology CDS 1283694 1283825 . - 0 ID=cds-WP_349875721.1;Parent=gene-DKM08_RS22670;Dbxref=GenBank:WP_349875721.1;Name=WP_349875721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044451.3;locus_tag=DKM08_RS22670;product=hypothetical protein;protein_id=WP_349875721.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1283909 1284079 . - . ID=gene-DKM08_RS22675;Name=DKM08_RS22675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22675;old_locus_tag=DKM08_06440;partial=true;pseudo=true;start_range=.,1283909 NZ_QFYX01000001.1 Protein Homology CDS 1283909 1284079 . - 0 ID=cds-DKM08_RS22675;Parent=gene-DKM08_RS22675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012655.6;locus_tag=DKM08_RS22675;partial=true;product=TetR family transcriptional regulator;pseudo=true;start_range=.,1283909;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1284087 1284512 . - . ID=gene-DKM08_RS06455;Name=DKM08_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06455;old_locus_tag=DKM08_06445 NZ_QFYX01000001.1 Protein Homology CDS 1284087 1284512 . - 0 ID=cds-WP_003407404.1;Parent=gene-DKM08_RS06455;Dbxref=GenBank:WP_003407404.1;Name=WP_003407404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215955.1;locus_tag=DKM08_RS06455;product=nuclear transport factor 2 family protein;protein_id=WP_003407404.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1284963 1285196 . + . ID=gene-DKM08_RS06460;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=DKM08_RS06460;old_locus_tag=DKM08_06450 NZ_QFYX01000001.1 Protein Homology CDS 1284963 1285196 . + 0 ID=cds-WP_003407407.1;Parent=gene-DKM08_RS06460;Dbxref=GenBank:WP_003407407.1;Name=WP_003407407.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215956.2;locus_tag=DKM08_RS06460;product=preprotein translocase subunit SecG;protein_id=WP_003407407.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1285335 1286810 . - . ID=gene-DKM08_RS06465;Name=DKM08_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06465;old_locus_tag=DKM08_06455 NZ_QFYX01000001.1 Protein Homology CDS 1285335 1286810 . - 0 ID=cds-WP_010950544.1;Parent=gene-DKM08_RS06465;Dbxref=GenBank:WP_010950544.1;Name=WP_010950544.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177811.1;locus_tag=DKM08_RS06465;product=PE family protein;protein_id=WP_010950544.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1286917 1289217 . + . ID=gene-DKM08_RS06470;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=DKM08_RS06470;old_locus_tag=DKM08_06460 NZ_QFYX01000001.1 Protein Homology CDS 1286917 1289217 . + 0 ID=cds-WP_003407419.1;Parent=gene-DKM08_RS06470;Dbxref=GenBank:WP_003407419.1;Name=WP_003407419.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215958.1;locus_tag=DKM08_RS06470;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_003407419.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1289333 1289797 . - . ID=gene-DKM08_RS06475;Name=DKM08_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06475;old_locus_tag=DKM08_06465 NZ_QFYX01000001.1 Protein Homology CDS 1289333 1289797 . - 0 ID=cds-WP_014584749.1;Parent=gene-DKM08_RS06475;Dbxref=GenBank:WP_014584749.1;Name=WP_014584749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584749.1;locus_tag=DKM08_RS06475;product=hypothetical protein;protein_id=WP_014584749.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1289894 1290133 . + . ID=gene-DKM08_RS22510;Name=DKM08_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22510;old_locus_tag=DKM08_06470 NZ_QFYX01000001.1 Protein Homology CDS 1289894 1290133 . + 0 ID=cds-WP_003407426.1;Parent=gene-DKM08_RS22510;Dbxref=GenBank:WP_003407426.1;Name=WP_003407426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456255.1;locus_tag=DKM08_RS22510;product=hypothetical protein;protein_id=WP_003407426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1290432 1290842 . - . ID=gene-DKM08_RS06490;Name=DKM08_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06490;old_locus_tag=DKM08_06480 NZ_QFYX01000001.1 Protein Homology CDS 1290432 1290842 . - 0 ID=cds-WP_003898881.1;Parent=gene-DKM08_RS06490;Dbxref=GenBank:WP_003898881.1;Name=WP_003898881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011739930.1;locus_tag=DKM08_RS06490;product=hypothetical protein;protein_id=WP_003898881.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1290859 1291602 . - . ID=gene-DKM08_RS06495;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=DKM08_RS06495;old_locus_tag=DKM08_06485 NZ_QFYX01000001.1 Protein Homology CDS 1290859 1291602 . - 0 ID=cds-WP_003407433.1;Parent=gene-DKM08_RS06495;Dbxref=GenBank:WP_003407433.1;Name=WP_003407433.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215961.1;locus_tag=DKM08_RS06495;product=6-phosphogluconolactonase;protein_id=WP_003407433.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1291599 1292510 . - . ID=gene-DKM08_RS06500;Name=opcA;gbkey=Gene;gene=opcA;gene_biotype=protein_coding;locus_tag=DKM08_RS06500;old_locus_tag=DKM08_06490 NZ_QFYX01000001.1 Protein Homology CDS 1291599 1292510 . - 0 ID=cds-WP_003407437.1;Parent=gene-DKM08_RS06500;Dbxref=GenBank:WP_003407437.1;Name=WP_003407437.1;Ontology_term=GO:0006098,GO:0065003;gbkey=CDS;gene=opcA;go_process=pentose-phosphate shunt|0006098||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215962.1;locus_tag=DKM08_RS06500;product=glucose-6-phosphate dehydrogenase assembly protein OpcA;protein_id=WP_003407437.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1292563 1294107 . - . ID=gene-DKM08_RS06505;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=DKM08_RS06505;old_locus_tag=DKM08_06495 NZ_QFYX01000001.1 Protein Homology CDS 1292563 1294107 . - 0 ID=cds-WP_003407443.1;Parent=gene-DKM08_RS06505;Dbxref=GenBank:WP_003407443.1;Name=WP_003407443.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215963.1;locus_tag=DKM08_RS06505;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003407443.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1294104 1295225 . - . ID=gene-DKM08_RS06510;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=DKM08_RS06510;old_locus_tag=DKM08_06500 NZ_QFYX01000001.1 Protein Homology CDS 1294104 1295225 . - 0 ID=cds-WP_003407447.1;Parent=gene-DKM08_RS06510;Dbxref=GenBank:WP_003407447.1;Name=WP_003407447.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215964.1;locus_tag=DKM08_RS06510;product=transaldolase;protein_id=WP_003407447.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1295242 1297344 . - . ID=gene-DKM08_RS06515;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=DKM08_RS06515;old_locus_tag=DKM08_06505 NZ_QFYX01000001.1 Protein Homology CDS 1295242 1297344 . - 0 ID=cds-WP_003407451.1;Parent=gene-DKM08_RS06515;Dbxref=GenBank:WP_003407451.1;Name=WP_003407451.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215965.1;locus_tag=DKM08_RS06515;product=transketolase;protein_id=WP_003407451.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1297783 1301982 . - . ID=gene-DKM08_RS06525;Name=DKM08_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06525;old_locus_tag=DKM08_06515 NZ_QFYX01000001.1 Protein Homology CDS 1297783 1301982 . - 0 ID=cds-WP_147020891.1;Parent=gene-DKM08_RS06525;Dbxref=GenBank:WP_147020891.1;Name=WP_147020891.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799183.1;locus_tag=DKM08_RS06525;product=PE family protein;protein_id=WP_147020891.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1302384 1303310 . + . ID=gene-DKM08_RS06530;Name=ctaB;gbkey=Gene;gene=ctaB;gene_biotype=protein_coding;locus_tag=DKM08_RS06530;old_locus_tag=DKM08_06520 NZ_QFYX01000001.1 Protein Homology CDS 1302384 1303310 . + 0 ID=cds-WP_003422137.1;Parent=gene-DKM08_RS06530;Dbxref=GenBank:WP_003422137.1;Name=WP_003422137.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=ctaB;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215967.1;locus_tag=DKM08_RS06530;product=heme o synthase;protein_id=WP_003422137.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1303359 1305746 . - . ID=gene-DKM08_RS06535;Name=DKM08_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06535;old_locus_tag=DKM08_06525 NZ_QFYX01000001.1 Protein Homology CDS 1303359 1305746 . - 0 ID=cds-WP_010950546.1;Parent=gene-DKM08_RS06535;Dbxref=GenBank:WP_010950546.1;Name=WP_010950546.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950546.1;locus_tag=DKM08_RS06535;product=PE family protein;protein_id=WP_010950546.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1305898 1307163 . + . ID=gene-DKM08_RS06540;Name=DKM08_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06540;old_locus_tag=DKM08_06530 NZ_QFYX01000001.1 Protein Homology CDS 1305898 1307163 . + 0 ID=cds-WP_003904629.1;Parent=gene-DKM08_RS06540;Dbxref=GenBank:WP_003904629.1;Name=WP_003904629.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215969.2;locus_tag=DKM08_RS06540;product=PucR family transcriptional regulator;protein_id=WP_003904629.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1307191 1308177 . - . ID=gene-DKM08_RS06545;Name=qor;gbkey=Gene;gene=qor;gene_biotype=protein_coding;locus_tag=DKM08_RS06545;old_locus_tag=DKM08_06535 NZ_QFYX01000001.1 Protein Homology CDS 1307191 1308177 . - 0 ID=cds-WP_003407462.1;Parent=gene-DKM08_RS06545;Dbxref=GenBank:WP_003407462.1;Name=WP_003407462.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;gene=qor;go_function=NADPH:quinone reductase activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215970.1;locus_tag=DKM08_RS06545;product=quinone oxidoreductase family protein;protein_id=WP_003407462.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1308197 1309060 . + . ID=gene-DKM08_RS06550;Name=DKM08_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06550;old_locus_tag=DKM08_06540 NZ_QFYX01000001.1 Protein Homology CDS 1308197 1309060 . + 0 ID=cds-WP_003900341.1;Parent=gene-DKM08_RS06550;Dbxref=GenBank:WP_003900341.1;Name=WP_003900341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215971.1;locus_tag=DKM08_RS06550;product=hypothetical protein;protein_id=WP_003900341.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1309010 1309942 . - . ID=gene-DKM08_RS06555;Name=DKM08_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06555;old_locus_tag=DKM08_06545 NZ_QFYX01000001.1 Protein Homology CDS 1309010 1309942 . - 0 ID=cds-WP_003407466.1;Parent=gene-DKM08_RS06555;Dbxref=GenBank:WP_003407466.1;Name=WP_003407466.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215972.1;locus_tag=DKM08_RS06555;product=COX15/CtaA family protein;protein_id=WP_003407466.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1310054 1310839 . - . ID=gene-DKM08_RS06560;Name=DKM08_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06560;old_locus_tag=DKM08_06550 NZ_QFYX01000001.1 Protein Homology CDS 1310054 1310839 . - 0 ID=cds-WP_003407475.1;Parent=gene-DKM08_RS06560;Dbxref=GenBank:WP_003407475.1;Name=WP_003407475.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215973.1;locus_tag=DKM08_RS06560;product=ABC transporter permease;protein_id=WP_003407475.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1310836 1311777 . - . ID=gene-DKM08_RS06565;Name=DKM08_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06565;old_locus_tag=DKM08_06555 NZ_QFYX01000001.1 Protein Homology CDS 1310836 1311777 . - 0 ID=cds-WP_003407477.1;Parent=gene-DKM08_RS06565;Dbxref=GenBank:WP_003407477.1;Name=WP_003407477.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215974.1;locus_tag=DKM08_RS06565;product=ABC transporter ATP-binding protein;protein_id=WP_003407477.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1311880 1313655 . - . ID=gene-DKM08_RS06570;Name=mptB;gbkey=Gene;gene=mptB;gene_biotype=protein_coding;locus_tag=DKM08_RS06570;old_locus_tag=DKM08_06560 NZ_QFYX01000001.1 Protein Homology CDS 1311880 1313655 . - 0 ID=cds-WP_003407479.1;Parent=gene-DKM08_RS06570;Dbxref=GenBank:WP_003407479.1;Name=WP_003407479.1;gbkey=CDS;gene=mptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215975.1;locus_tag=DKM08_RS06570;product=polyprenol phosphomannose-dependent alpha 1%2C6 mannosyltransferase MptB;protein_id=WP_003407479.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1313703 1314509 . + . ID=gene-DKM08_RS06575;Name=sufR;gbkey=Gene;gene=sufR;gene_biotype=protein_coding;locus_tag=DKM08_RS06575;old_locus_tag=DKM08_06565 NZ_QFYX01000001.1 Protein Homology CDS 1313703 1314509 . + 0 ID=cds-WP_003407481.1;Parent=gene-DKM08_RS06575;Dbxref=GenBank:WP_003407481.1;Name=WP_003407481.1;gbkey=CDS;gene=sufR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215976.2;locus_tag=DKM08_RS06575;product=suf operon transcriptional regulator SufR;protein_id=WP_003407481.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1314506 1317046 . + . ID=gene-DKM08_RS06580;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=DKM08_RS06580;old_locus_tag=DKM08_06570 NZ_QFYX01000001.1 Protein Homology CDS 1314506 1317046 . + 0 ID=cds-WP_003407484.1;Parent=gene-DKM08_RS06580;Dbxref=GenBank:WP_003407484.1;Name=WP_003407484.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215977.1;locus_tag=DKM08_RS06580;product=intein-containing Fe-S cluster assembly protein SufB;protein_id=WP_003407484.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1317043 1318236 . + . ID=gene-DKM08_RS06585;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=DKM08_RS06585;old_locus_tag=DKM08_06575 NZ_QFYX01000001.1 Protein Homology CDS 1317043 1318236 . + 0 ID=cds-WP_003407487.1;Parent=gene-DKM08_RS06585;Dbxref=GenBank:WP_003407487.1;Name=WP_003407487.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215978.1;locus_tag=DKM08_RS06585;product=Fe-S cluster assembly protein SufD;protein_id=WP_003407487.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1318233 1319033 . + . ID=gene-DKM08_RS06590;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=DKM08_RS06590;old_locus_tag=DKM08_06580 NZ_QFYX01000001.1 Protein Homology CDS 1318233 1319033 . + 0 ID=cds-WP_003407489.1;Parent=gene-DKM08_RS06590;Dbxref=GenBank:WP_003407489.1;Name=WP_003407489.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215979.1;locus_tag=DKM08_RS06590;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_003407489.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1319035 1320288 . + . ID=gene-DKM08_RS06595;Name=csd;gbkey=Gene;gene=csd;gene_biotype=protein_coding;locus_tag=DKM08_RS06595;old_locus_tag=DKM08_06585 NZ_QFYX01000001.1 Protein Homology CDS 1319035 1320288 . + 0 ID=cds-WP_003407490.1;Parent=gene-DKM08_RS06595;Dbxref=GenBank:WP_003407490.1;Name=WP_003407490.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=csd;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215980.1;locus_tag=DKM08_RS06595;product=cysteine desulfurase;protein_id=WP_003407490.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1320285 1320773 . + . ID=gene-DKM08_RS06600;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=DKM08_RS06600;old_locus_tag=DKM08_06590 NZ_QFYX01000001.1 Protein Homology CDS 1320285 1320773 . + 0 ID=cds-WP_003407491.1;Parent=gene-DKM08_RS06600;Dbxref=GenBank:WP_003407491.1;Name=WP_003407491.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215981.1;locus_tag=DKM08_RS06600;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_003407491.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1320748 1321095 . + . ID=gene-DKM08_RS06605;Name=DKM08_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06605;old_locus_tag=DKM08_06595 NZ_QFYX01000001.1 Protein Homology CDS 1320748 1321095 . + 0 ID=cds-WP_003407492.1;Parent=gene-DKM08_RS06605;Dbxref=GenBank:WP_003407492.1;Name=WP_003407492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215982.1;locus_tag=DKM08_RS06605;product=metal-sulfur cluster assembly factor;protein_id=WP_003407492.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1321190 1323019 . - . ID=gene-DKM08_RS06610;Name=DKM08_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06610;old_locus_tag=DKM08_06600 NZ_QFYX01000001.1 Protein Homology CDS 1321190 1323019 . - 0 ID=cds-WP_003900343.1;Parent=gene-DKM08_RS06610;Dbxref=GenBank:WP_003900343.1;Name=WP_003900343.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215983.1;locus_tag=DKM08_RS06610;product=acyl-CoA dehydrogenase;protein_id=WP_003900343.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1323126 1324238 . - . ID=gene-DKM08_RS06615;Name=DKM08_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06615;old_locus_tag=DKM08_06605 NZ_QFYX01000001.1 Protein Homology CDS 1323126 1324238 . - 0 ID=cds-WP_003407494.1;Parent=gene-DKM08_RS06615;Dbxref=GenBank:WP_003407494.1;Name=WP_003407494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177814.1;locus_tag=DKM08_RS06615;product=PE-PGRS family ubiquitin-binding protein;protein_id=WP_003407494.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1324480 1326453 . + . ID=gene-DKM08_RS06620;Name=ctpD;gbkey=Gene;gene=ctpD;gene_biotype=protein_coding;locus_tag=DKM08_RS06620;old_locus_tag=DKM08_06610 NZ_QFYX01000001.1 Protein Homology CDS 1324480 1326453 . + 0 ID=cds-WP_003900344.1;Parent=gene-DKM08_RS06620;Dbxref=GenBank:WP_003900344.1;Name=WP_003900344.1;gbkey=CDS;gene=ctpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215985.1;locus_tag=DKM08_RS06620;product=cobalt-translocating P-type ATPase CtpD;protein_id=WP_003900344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1326497 1326871 . + . ID=gene-DKM08_RS06625;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DKM08_RS06625;old_locus_tag=DKM08_06615 NZ_QFYX01000001.1 Protein Homology CDS 1326497 1326871 . + 0 ID=cds-WP_003900345.1;Parent=gene-DKM08_RS06625;Dbxref=GenBank:WP_003900345.1;Name=WP_003900345.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215986.1;locus_tag=DKM08_RS06625;product=thioredoxin family protein;protein_id=WP_003900345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1326887 1327258 . + . ID=gene-DKM08_RS06630;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DKM08_RS06630;old_locus_tag=DKM08_06620 NZ_QFYX01000001.1 Protein Homology CDS 1326887 1327258 . + 0 ID=cds-WP_003407501.1;Parent=gene-DKM08_RS06630;Dbxref=GenBank:WP_003407501.1;Name=WP_003407501.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177815.1;locus_tag=DKM08_RS06630;product=thioredoxin;protein_id=WP_003407501.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1327280 1328137 . + . ID=gene-DKM08_RS06635;Name=DKM08_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06635;old_locus_tag=DKM08_06625 NZ_QFYX01000001.1 Protein Homology CDS 1327280 1328137 . + 0 ID=cds-WP_003407504.1;Parent=gene-DKM08_RS06635;Dbxref=GenBank:WP_003407504.1;Name=WP_003407504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215988.1;locus_tag=DKM08_RS06635;product=enoyl-CoA hydratase;protein_id=WP_003407504.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1328173 1329801 . + . ID=gene-DKM08_RS06640;Name=DKM08_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06640;old_locus_tag=DKM08_06630 NZ_QFYX01000001.1 Protein Homology CDS 1328173 1329801 . + 0 ID=cds-WP_003407507.1;Parent=gene-DKM08_RS06640;Dbxref=GenBank:WP_003407507.1;Name=WP_003407507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215989.1;locus_tag=DKM08_RS06640;product=macrolide ABC transporter ATP-binding protein;protein_id=WP_003407507.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1329898 1330089 . + . ID=gene-DKM08_RS06645;Name=DKM08_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06645;old_locus_tag=DKM08_06635 NZ_QFYX01000001.1 Protein Homology CDS 1329898 1330089 . + 0 ID=cds-WP_010950547.1;Parent=gene-DKM08_RS06645;Dbxref=GenBank:WP_010950547.1;Name=WP_010950547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177644.1;locus_tag=DKM08_RS06645;product=helix-turn-helix domain-containing protein;protein_id=WP_010950547.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1330158 1330721 . - . ID=gene-DKM08_RS06650;Name=DKM08_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06650;old_locus_tag=DKM08_06640 NZ_QFYX01000001.1 Protein Homology CDS 1330158 1330721 . - 0 ID=cds-WP_003407514.1;Parent=gene-DKM08_RS06650;Dbxref=GenBank:WP_003407514.1;Name=WP_003407514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215990.1;locus_tag=DKM08_RS06650;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407514.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1330732 1333563 . - . ID=gene-DKM08_RS06655;Name=acn;gbkey=Gene;gene=acn;gene_biotype=protein_coding;locus_tag=DKM08_RS06655;old_locus_tag=DKM08_06645 NZ_QFYX01000001.1 Protein Homology CDS 1330732 1333563 . - 0 ID=cds-WP_003898889.1;Parent=gene-DKM08_RS06655;Dbxref=GenBank:WP_003898889.1;Name=WP_003898889.1;gbkey=CDS;gene=acn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215991.1;locus_tag=DKM08_RS06655;product=iron-regulated aconitate hydratase Acn;protein_id=WP_003898889.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1333721 1334281 . + . ID=gene-DKM08_RS06660;Name=DKM08_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06660;old_locus_tag=DKM08_06650 NZ_QFYX01000001.1 Protein Homology CDS 1333721 1334281 . + 0 ID=cds-WP_003407520.1;Parent=gene-DKM08_RS06660;Dbxref=GenBank:WP_003407520.1;Name=WP_003407520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215992.1;locus_tag=DKM08_RS06660;product=DUF6676 family protein;protein_id=WP_003407520.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1334507 1335925 . + . ID=gene-DKM08_RS06665;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;locus_tag=DKM08_RS06665;old_locus_tag=DKM08_06655 NZ_QFYX01000001.1 Protein Homology CDS 1334507 1335925 . + 0 ID=cds-WP_003407523.1;Parent=gene-DKM08_RS06665;Dbxref=GenBank:WP_003407523.1;Name=WP_003407523.1;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215993.1;locus_tag=DKM08_RS06665;product=NlpC/P60 family peptidoglycan endopeptidase RipA;protein_id=WP_003407523.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1335936 1336661 . + . ID=gene-DKM08_RS06670;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=DKM08_RS06670;old_locus_tag=DKM08_06660 NZ_QFYX01000001.1 Protein Homology CDS 1335936 1336661 . + 0 ID=cds-WP_003407525.1;Parent=gene-DKM08_RS06670;Dbxref=GenBank:WP_003407525.1;Name=WP_003407525.1;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215994.1;locus_tag=DKM08_RS06670;product=NlpC/P60 family peptidoglycan endopeptidase RipB;protein_id=WP_003407525.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1336800 1337933 . + . ID=gene-DKM08_RS06675;Name=DKM08_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06675;old_locus_tag=DKM08_06665 NZ_QFYX01000001.1 Protein Homology CDS 1336800 1337933 . + 0 ID=cds-WP_003407527.1;Parent=gene-DKM08_RS06675;Dbxref=GenBank:WP_003407527.1;Name=WP_003407527.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177816.1;locus_tag=DKM08_RS06675;product=AAA family ATPase;protein_id=WP_003407527.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1337930 1338883 . + . ID=gene-DKM08_RS06680;Name=DKM08_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06680;old_locus_tag=DKM08_06670 NZ_QFYX01000001.1 Protein Homology CDS 1337930 1338883 . + 0 ID=cds-WP_003407529.1;Parent=gene-DKM08_RS06680;Dbxref=GenBank:WP_003407529.1;Name=WP_003407529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215996.1;locus_tag=DKM08_RS06680;product=DUF58 domain-containing protein;protein_id=WP_003407529.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1338894 1339901 . + . ID=gene-DKM08_RS06685;Name=DKM08_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06685;old_locus_tag=DKM08_06675 NZ_QFYX01000001.1 Protein Homology CDS 1338894 1339901 . + 0 ID=cds-WP_003407530.1;Parent=gene-DKM08_RS06685;Dbxref=GenBank:WP_003407530.1;Name=WP_003407530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215997.1;locus_tag=DKM08_RS06685;product=VWA domain-containing protein;protein_id=WP_003407530.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1339974 1340816 . - . ID=gene-DKM08_RS06690;Name=DKM08_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06690;old_locus_tag=DKM08_06680 NZ_QFYX01000001.1 Protein Homology CDS 1339974 1340816 . - 0 ID=cds-WP_003407537.1;Parent=gene-DKM08_RS06690;Dbxref=GenBank:WP_003407537.1;Name=WP_003407537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215998.2;locus_tag=DKM08_RS06690;product=hypothetical protein;protein_id=WP_003407537.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1340957 1341700 . + . ID=gene-DKM08_RS06695;Name=fabG1;gbkey=Gene;gene=fabG1;gene_biotype=protein_coding;gene_synonym=mabA;locus_tag=DKM08_RS06695;old_locus_tag=DKM08_06685 NZ_QFYX01000001.1 Protein Homology CDS 1340957 1341700 . + 0 ID=cds-WP_003898892.1;Parent=gene-DKM08_RS06695;Dbxref=GenBank:WP_003898892.1;Name=WP_003898892.1;gbkey=CDS;gene=fabG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215999.1;locus_tag=DKM08_RS06695;product=3-oxoacyl-ACP reductase FabG1;protein_id=WP_003898892.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1341719 1342528 . + . ID=gene-DKM08_RS06700;Name=inhA;gbkey=Gene;gene=inhA;gene_biotype=protein_coding;locus_tag=DKM08_RS06700;old_locus_tag=DKM08_06690 NZ_QFYX01000001.1 Protein Homology CDS 1341719 1342528 . + 0 ID=cds-WP_003407553.1;Parent=gene-DKM08_RS06700;Dbxref=GenBank:WP_003407553.1;Name=WP_003407553.1;Ontology_term=GO:0071768;gbkey=CDS;gene=inhA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216000.1;locus_tag=DKM08_RS06700;product=NADH-dependent enoyl-ACP reductase InhA;protein_id=WP_003407553.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1342534 1343568 . + . ID=gene-DKM08_RS06705;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=DKM08_RS06705;old_locus_tag=DKM08_06695 NZ_QFYX01000001.1 Protein Homology CDS 1342534 1343568 . + 0 ID=cds-WP_003407559.1;Parent=gene-DKM08_RS06705;Dbxref=GenBank:WP_003407559.1;Name=WP_003407559.1;Ontology_term=GO:0006783,GO:0004325;gbkey=CDS;gene=hemZ;go_function=ferrochelatase activity|0004325||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216001.1;locus_tag=DKM08_RS06705;product=ferrochelatase;protein_id=WP_003407559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1343534 1344400 . - . ID=gene-DKM08_RS06710;Name=DKM08_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06710;old_locus_tag=DKM08_06700 NZ_QFYX01000001.1 Protein Homology CDS 1343534 1344400 . - 0 ID=cds-WP_003902086.1;Parent=gene-DKM08_RS06710;Dbxref=GenBank:WP_003902086.1;Name=WP_003902086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216002.2;locus_tag=DKM08_RS06710;product=hypothetical protein;protein_id=WP_003902086.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1344458 1344892 . + . ID=gene-DKM08_RS06715;Name=DKM08_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06715;old_locus_tag=DKM08_06705 NZ_QFYX01000001.1 Protein Homology CDS 1344458 1344892 . + 0 ID=cds-WP_003407562.1;Parent=gene-DKM08_RS06715;Dbxref=GenBank:WP_003407562.1;Name=WP_003407562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216003.1;locus_tag=DKM08_RS06715;product=NfeD family protein;protein_id=WP_003407562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1344914 1346059 . + . ID=gene-DKM08_RS06720;Name=DKM08_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06720;old_locus_tag=DKM08_06710 NZ_QFYX01000001.1 Protein Homology CDS 1344914 1346059 . + 0 ID=cds-WP_003407571.1;Parent=gene-DKM08_RS06720;Dbxref=GenBank:WP_003407571.1;Name=WP_003407571.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216004.1;locus_tag=DKM08_RS06720;product=SPFH domain-containing protein;protein_id=WP_003407571.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1346069 1346425 . + . ID=gene-DKM08_RS06725;Name=DKM08_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06725;old_locus_tag=DKM08_06715 NZ_QFYX01000001.1 Protein Homology CDS 1346069 1346425 . + 0 ID=cds-WP_003900347.1;Parent=gene-DKM08_RS06725;Dbxref=GenBank:WP_003900347.1;Name=WP_003900347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177645.1;locus_tag=DKM08_RS06725;product=DoxX family protein;protein_id=WP_003900347.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1346471 1346650 . + . ID=gene-DKM08_RS06730;Name=DKM08_RS06730;end_range=1346650,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS06730;old_locus_tag=DKM08_06720;partial=true;pseudo=true;start_range=.,1346471 NZ_QFYX01000001.1 Protein Homology CDS 1346471 1346650 . + 0 ID=cds-DKM08_RS06730;Parent=gene-DKM08_RS06730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1346650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903477.1;locus_tag=DKM08_RS06730;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1346471;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1346839 1348146 . + . ID=gene-DKM08_RS06735;Name=DKM08_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06735;old_locus_tag=DKM08_06725 NZ_QFYX01000001.1 Protein Homology CDS 1346839 1348146 . + 0 ID=cds-WP_003898896.1;Parent=gene-DKM08_RS06735;Dbxref=GenBank:WP_003898896.1;Name=WP_003898896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216006.1;locus_tag=DKM08_RS06735;product=membrane protein;protein_id=WP_003898896.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1348187 1348378 . + . ID=gene-DKM08_RS22680;Name=DKM08_RS22680;end_range=1348378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22680;partial=true;pseudo=true;start_range=.,1348187 NZ_QFYX01000001.1 Protein Homology CDS 1348187 1348378 . + 0 ID=cds-DKM08_RS22680;Parent=gene-DKM08_RS22680;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1348378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289458.1;locus_tag=DKM08_RS22680;partial=true;product=transposase;pseudo=true;start_range=.,1348187;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1348725 1349483 . - . ID=gene-DKM08_RS06745;Name=DKM08_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06745;old_locus_tag=DKM08_06735 NZ_QFYX01000001.1 Protein Homology CDS 1348725 1349483 . - 0 ID=cds-WP_003407583.1;Parent=gene-DKM08_RS06745;Dbxref=GenBank:WP_003407583.1;Name=WP_003407583.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216007.1;locus_tag=DKM08_RS06745;product=TVP38/TMEM64 family protein;protein_id=WP_003407583.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1349674 1351521 . + . ID=gene-DKM08_RS06750;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=DKM08_RS06750;old_locus_tag=DKM08_06740 NZ_QFYX01000001.1 Protein Homology CDS 1349674 1351521 . + 0 ID=cds-WP_003407585.1;Parent=gene-DKM08_RS06750;Dbxref=GenBank:WP_003407585.1;Name=WP_003407585.1;Ontology_term=GO:0019652,GO:0004494;gbkey=CDS;gene=mutA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA;go_process=lactate fermentation to propionate and acetate|0019652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216008.1;locus_tag=DKM08_RS06750;product=methylmalonyl-CoA mutase small subunit;protein_id=WP_003407585.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1351522 1353774 . + . ID=gene-DKM08_RS06755;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=DKM08_RS06755;old_locus_tag=DKM08_06745 NZ_QFYX01000001.1 Protein Homology CDS 1351522 1353774 . + 0 ID=cds-WP_003407587.1;Parent=gene-DKM08_RS06755;Dbxref=GenBank:WP_003407587.1;Name=WP_003407587.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216009.1;locus_tag=DKM08_RS06755;product=methylmalonyl-CoA mutase;protein_id=WP_003407587.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1353788 1354090 . + . ID=gene-DKM08_RS06760;Name=mazE4;gbkey=Gene;gene=mazE4;gene_biotype=protein_coding;locus_tag=DKM08_RS06760;old_locus_tag=DKM08_06750 NZ_QFYX01000001.1 Protein Homology CDS 1353788 1354090 . + 0 ID=cds-WP_003900349.1;Parent=gene-DKM08_RS06760;Dbxref=GenBank:WP_003900349.1;Name=WP_003900349.1;gbkey=CDS;gene=mazE4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216010.1;locus_tag=DKM08_RS06760;product=type II toxin-antitoxin system antitoxin MazE4;protein_id=WP_003900349.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1354087 1354404 . + . ID=gene-DKM08_RS06765;Name=mazF4;gbkey=Gene;gene=mazF4;gene_biotype=protein_coding;gene_synonym=mazF-mt7;locus_tag=DKM08_RS06765;old_locus_tag=DKM08_06755 NZ_QFYX01000001.1 Protein Homology CDS 1354087 1354404 . + 0 ID=cds-WP_003407593.1;Parent=gene-DKM08_RS06765;Dbxref=GenBank:WP_003407593.1;Name=WP_003407593.1;gbkey=CDS;gene=mazF4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216011.1;locus_tag=DKM08_RS06765;product=type II toxin-antitoxin system toxin endoribonuclease MazF4;protein_id=WP_003407593.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1354401 1355405 . + . ID=gene-DKM08_RS06770;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=DKM08_RS06770;old_locus_tag=DKM08_06760 NZ_QFYX01000001.1 Protein Homology CDS 1354401 1355405 . + 0 ID=cds-WP_003407596.1;Parent=gene-DKM08_RS06770;Dbxref=GenBank:WP_003407596.1;Name=WP_003407596.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216012.1;locus_tag=DKM08_RS06770;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_003407596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1355458 1356747 . + . ID=gene-DKM08_RS06775;Name=lipL;gbkey=Gene;gene=lipL;gene_biotype=protein_coding;locus_tag=DKM08_RS06775;old_locus_tag=DKM08_06765 NZ_QFYX01000001.1 Protein Homology CDS 1355458 1356747 . + 0 ID=cds-WP_003407599.1;Parent=gene-DKM08_RS06775;Dbxref=GenBank:WP_003407599.1;Name=WP_003407599.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipL;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216013.1;locus_tag=DKM08_RS06775;product=serine hydrolase domain-containing protein;protein_id=WP_003407599.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1356820 1357596 . - . ID=gene-DKM08_RS06780;Name=DKM08_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06780;old_locus_tag=DKM08_06770 NZ_QFYX01000001.1 Protein Homology CDS 1356820 1357596 . - 0 ID=cds-WP_305953045.1;Parent=gene-DKM08_RS06780;Dbxref=GenBank:WP_305953045.1;Name=WP_305953045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898898.1;locus_tag=DKM08_RS06780;product=class I SAM-dependent methyltransferase;protein_id=WP_305953045.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1357651 1357860 . - . ID=gene-DKM08_RS06785;Name=DKM08_RS06785;end_range=1357860,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS06785;old_locus_tag=DKM08_06775;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1357651 1357860 . - 0 ID=cds-DKM08_RS06785;Parent=gene-DKM08_RS06785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000166;end_range=1357860,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177647.1;locus_tag=DKM08_RS06785;partial=true;product=dodecin;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1357873 1358175 . - . ID=gene-DKM08_RS22685;Name=DKM08_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22685 NZ_QFYX01000001.1 Protein Homology CDS 1357873 1358175 . - 0 ID=cds-WP_003407610.1;Parent=gene-DKM08_RS22685;Dbxref=GenBank:WP_003407610.1;Name=WP_003407610.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.6;locus_tag=DKM08_RS22685;product=NUDIX domain-containing protein;protein_id=WP_003407610.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1358367 1359395 . + . ID=gene-DKM08_RS06795;Name=DKM08_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06795;old_locus_tag=DKM08_06785 NZ_QFYX01000001.1 Protein Homology CDS 1358367 1359395 . + 0 ID=cds-WP_003407612.1;Parent=gene-DKM08_RS06795;Dbxref=GenBank:WP_003407612.1;Name=WP_003407612.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216016.1;locus_tag=DKM08_RS06795;product=glycosyltransferase family 2 protein;protein_id=WP_003407612.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1359407 1360228 . + . ID=gene-DKM08_RS06800;Name=DKM08_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06800;old_locus_tag=DKM08_06790 NZ_QFYX01000001.1 Protein Homology CDS 1359407 1360228 . + 0 ID=cds-WP_003898901.1;Parent=gene-DKM08_RS06800;Dbxref=GenBank:WP_003898901.1;Name=WP_003898901.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216017.1;locus_tag=DKM08_RS06800;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_003898901.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1360441 1361340 . + . ID=gene-DKM08_RS06805;Name=DKM08_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06805;old_locus_tag=DKM08_06795 NZ_QFYX01000001.1 Protein Homology CDS 1360441 1361340 . + 0 ID=cds-WP_003407616.1;Parent=gene-DKM08_RS06805;Dbxref=GenBank:WP_003407616.1;Name=WP_003407616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216018.1;locus_tag=DKM08_RS06805;product=hypothetical protein;protein_id=WP_003407616.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1361513 1362625 . - . ID=gene-DKM08_RS06810;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=DKM08_RS06810;old_locus_tag=DKM08_06800 NZ_QFYX01000001.1 Protein Homology CDS 1361513 1362625 . - 0 ID=cds-WP_003910381.1;Parent=gene-DKM08_RS06810;Dbxref=GenBank:WP_003910381.1;Name=WP_003910381.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351436.1;locus_tag=DKM08_RS06810;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_003910381.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1362798 1363463 . - . ID=gene-DKM08_RS06815;Name=DKM08_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06815;old_locus_tag=DKM08_06805 NZ_QFYX01000001.1 Protein Homology CDS 1362798 1363463 . - 0 ID=cds-WP_003407619.1;Parent=gene-DKM08_RS06815;Dbxref=GenBank:WP_003407619.1;Name=WP_003407619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216021.1;locus_tag=DKM08_RS06815;product=acetyltransferase;protein_id=WP_003407619.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1363656 1364420 . + . ID=gene-DKM08_RS06825;Name=DKM08_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06825;old_locus_tag=DKM08_06815 NZ_QFYX01000001.1 Protein Homology CDS 1363656 1364420 . + 0 ID=cds-WP_003407654.1;Parent=gene-DKM08_RS06825;Dbxref=GenBank:WP_003407654.1;Name=WP_003407654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216033.1;locus_tag=DKM08_RS06825;product=GAP family protein;protein_id=WP_003407654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1364429 1365388 . + . ID=gene-DKM08_RS06830;Name=DKM08_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06830;old_locus_tag=DKM08_06820 NZ_QFYX01000001.1 Protein Homology CDS 1364429 1365388 . + 0 ID=cds-WP_010950551.1;Parent=gene-DKM08_RS06830;Dbxref=GenBank:WP_010950551.1;Name=WP_010950551.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216034.1;locus_tag=DKM08_RS06830;product=glycosyltransferase family 2 protein;protein_id=WP_010950551.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1365635 1365787 . + . ID=gene-DKM08_RS21550;Name=DKM08_RS21550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21550;partial=true;pseudo=true;start_range=.,1365635 NZ_QFYX01000001.1 Protein Homology CDS 1365635 1365787 . + 0 ID=cds-DKM08_RS21550;Parent=gene-DKM08_RS21550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=DKM08_RS21550;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;start_range=.,1365635;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1365813 1366853 . + . ID=gene-DKM08_RS06840;Name=DKM08_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06840;old_locus_tag=DKM08_06830 NZ_QFYX01000001.1 Protein Homology CDS 1365813 1366853 . + 0 ID=cds-WP_003407657.1;Parent=gene-DKM08_RS06840;Dbxref=GenBank:WP_003407657.1;Name=WP_003407657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216036.3;locus_tag=DKM08_RS06840;product=glycosyltransferase;protein_id=WP_003407657.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1367087 1368838 . + . ID=gene-DKM08_RS06850;Name=fadD25;gbkey=Gene;gene=fadD25;gene_biotype=protein_coding;gene_synonym=faaL25;locus_tag=DKM08_RS06850;old_locus_tag=DKM08_06840 NZ_QFYX01000001.1 Protein Homology CDS 1367087 1368838 . + 0 ID=cds-WP_010950552.1;Parent=gene-DKM08_RS06850;Dbxref=GenBank:WP_010950552.1;Name=WP_010950552.1;gbkey=CDS;gene=fadD25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216037.1;locus_tag=DKM08_RS06850;product=fatty-acid--AMP ligase FAAL25/FadD25;protein_id=WP_010950552.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1368957 1372397 . - . ID=gene-DKM08_RS06855;Name=mmpL12;gbkey=Gene;gene=mmpL12;gene_biotype=pseudogene;locus_tag=DKM08_RS06855;old_locus_tag=DKM08_06845;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1368957 1372397 . - 0 ID=cds-DKM08_RS06855;Parent=gene-DKM08_RS06855;Note=internal stop;gbkey=CDS;gene=mmpL12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216038.1;locus_tag=DKM08_RS06855;product=RND transporter MmpL12;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1372438 1373481 . + . ID=gene-DKM08_RS06860;Name=DKM08_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06860;old_locus_tag=DKM08_06850 NZ_QFYX01000001.1 Protein Homology CDS 1372438 1373481 . + 0 ID=cds-WP_003407670.1;Parent=gene-DKM08_RS06860;Dbxref=GenBank:WP_003407670.1;Name=WP_003407670.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216039.1;locus_tag=DKM08_RS06860;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003407670.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1373511 1374755 . + . ID=gene-DKM08_RS06865;Name=DKM08_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06865;old_locus_tag=DKM08_06855 NZ_QFYX01000001.1 Protein Homology CDS 1373511 1374755 . + 0 ID=cds-WP_003407671.1;Parent=gene-DKM08_RS06865;Dbxref=GenBank:WP_003407671.1;Name=WP_003407671.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216040.1;locus_tag=DKM08_RS06865;product=glycosyltransferase;protein_id=WP_003407671.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1374802 1375587 . + . ID=gene-DKM08_RS06870;Name=DKM08_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06870;old_locus_tag=DKM08_06860 NZ_QFYX01000001.1 Protein Homology CDS 1374802 1375587 . + 0 ID=cds-WP_003407672.1;Parent=gene-DKM08_RS06870;Dbxref=GenBank:WP_003407672.1;Name=WP_003407672.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216041.1;locus_tag=DKM08_RS06870;product=glycosyltransferase family 2 protein;protein_id=WP_003407672.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1375565 1376845 . - . ID=gene-DKM08_RS06875;Name=DKM08_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06875;old_locus_tag=DKM08_06865 NZ_QFYX01000001.1 Protein Homology CDS 1375565 1376845 . - 0 ID=cds-WP_003407676.1;Parent=gene-DKM08_RS06875;Dbxref=GenBank:WP_003407676.1;Name=WP_003407676.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216042.1;locus_tag=DKM08_RS06875;product=glycosyltransferase;protein_id=WP_003407676.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1376868 1383186 . - . ID=gene-DKM08_RS06880;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=pseudogene;locus_tag=DKM08_RS06880;old_locus_tag=DKM08_06870;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1376868 1383186 . - 0 ID=cds-DKM08_RS06880;Parent=gene-DKM08_RS06880;Note=frameshifted;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216043.1;locus_tag=DKM08_RS06880;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1383730 1384227 . - . ID=gene-DKM08_RS06885;Name=DKM08_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06885;old_locus_tag=DKM08_06875 NZ_QFYX01000001.1 Protein Homology CDS 1383730 1384227 . - 0 ID=cds-WP_003898919.1;Parent=gene-DKM08_RS06885;Dbxref=GenBank:WP_003898919.1;Name=WP_003898919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216044.1;locus_tag=DKM08_RS06885;product=polyketide synthase;protein_id=WP_003898919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1384279 1386033 . + . ID=gene-DKM08_RS06890;Name=fadD24;gbkey=Gene;gene=fadD24;gene_biotype=protein_coding;gene_synonym=faaL24;locus_tag=DKM08_RS06890;old_locus_tag=DKM08_06880 NZ_QFYX01000001.1 Protein Homology CDS 1384279 1386033 . + 0 ID=cds-WP_003898920.1;Parent=gene-DKM08_RS06890;Dbxref=GenBank:WP_003898920.1;Name=WP_003898920.1;gbkey=CDS;gene=fadD24;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216045.1;locus_tag=DKM08_RS06890;product=fatty-acid--AMP ligase FAAL24/FadD24;protein_id=WP_003898920.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1386150 1387253 . + . ID=gene-DKM08_RS06895;Name=adh;gbkey=Gene;gene=adh;gene_biotype=protein_coding;locus_tag=DKM08_RS06895;old_locus_tag=DKM08_06885 NZ_QFYX01000001.1 Protein Homology CDS 1386150 1387253 . + 0 ID=cds-WP_003407690.1;Parent=gene-DKM08_RS06895;Dbxref=GenBank:WP_003407690.1;Name=WP_003407690.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=adh;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216046.1;locus_tag=DKM08_RS06895;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_003407690.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1387250 1387816 . + . ID=gene-DKM08_RS06900;Name=DKM08_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06900;old_locus_tag=DKM08_06890 NZ_QFYX01000001.1 Protein Homology CDS 1387250 1387816 . + 0 ID=cds-WP_003407692.1;Parent=gene-DKM08_RS06900;Dbxref=GenBank:WP_003407692.1;Name=WP_003407692.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216047.1;locus_tag=DKM08_RS06900;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003407692.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1387893 1388327 . - . ID=gene-DKM08_RS06905;Name=DKM08_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06905;old_locus_tag=DKM08_06895 NZ_QFYX01000001.1 Protein Homology CDS 1387893 1388327 . - 0 ID=cds-WP_003407695.1;Parent=gene-DKM08_RS06905;Dbxref=GenBank:WP_003407695.1;Name=WP_003407695.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216048.1;locus_tag=DKM08_RS06905;product=PaaI family thioesterase;protein_id=WP_003407695.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1388387 1389514 . + . ID=gene-DKM08_RS06910;Name=DKM08_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06910;old_locus_tag=DKM08_06900 NZ_QFYX01000001.1 Protein Homology CDS 1388387 1389514 . + 0 ID=cds-WP_023349518.1;Parent=gene-DKM08_RS06910;Dbxref=GenBank:WP_023349518.1;Name=WP_023349518.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216049.1;locus_tag=DKM08_RS06910;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_023349518.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1389511 1390188 . + . ID=gene-DKM08_RS06915;Name=DKM08_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06915;old_locus_tag=DKM08_06905 NZ_QFYX01000001.1 Protein Homology CDS 1389511 1390188 . + 0 ID=cds-WP_003407700.1;Parent=gene-DKM08_RS06915;Dbxref=GenBank:WP_003407700.1;Name=WP_003407700.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216050.1;locus_tag=DKM08_RS06915;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407700.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 1390286 1390455 . + . ID=id-NZ_QFYX01000001.1:1390286..1390455;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 1390753 1390989 . + . ID=gene-DKM08_RS06920;Name=DKM08_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06920;old_locus_tag=DKM08_06910 NZ_QFYX01000001.1 Protein Homology CDS 1390753 1390989 . + 0 ID=cds-WP_003407710.1;Parent=gene-DKM08_RS06920;Dbxref=GenBank:WP_003407710.1;Name=WP_003407710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216051.1;locus_tag=DKM08_RS06920;product=Rv1535 family protein;protein_id=WP_003407710.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1391296 1394421 . + . ID=gene-DKM08_RS06925;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=DKM08_RS06925;old_locus_tag=DKM08_06915 NZ_QFYX01000001.1 Protein Homology CDS 1391296 1394421 . + 0 ID=cds-WP_010950555.1;Parent=gene-DKM08_RS06925;Dbxref=GenBank:WP_010950555.1;Name=WP_010950555.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216052.1;locus_tag=DKM08_RS06925;product=isoleucine--tRNA ligase;protein_id=WP_010950555.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1394633 1396024 . + . ID=gene-DKM08_RS06930;Name=dinX;gbkey=Gene;gene=dinX;gene_biotype=protein_coding;locus_tag=DKM08_RS06930;old_locus_tag=DKM08_06920 NZ_QFYX01000001.1 Protein Homology CDS 1394633 1396024 . + 0 ID=cds-WP_003904641.1;Parent=gene-DKM08_RS06930;Dbxref=GenBank:WP_003904641.1;Name=WP_003904641.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=dinX;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216053.3;locus_tag=DKM08_RS06930;product=DNA polymerase IV;protein_id=WP_003904641.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1395989 1396969 . - . ID=gene-DKM08_RS06935;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=DKM08_RS06935;old_locus_tag=DKM08_06925 NZ_QFYX01000001.1 Protein Homology CDS 1395989 1396969 . - 0 ID=cds-WP_003407720.1;Parent=gene-DKM08_RS06935;Dbxref=GenBank:WP_003407720.1;Name=WP_003407720.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216054.1;locus_tag=DKM08_RS06935;product=asparaginase;protein_id=WP_003407720.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1397021 1397629 . + . ID=gene-DKM08_RS06940;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=DKM08_RS06940;old_locus_tag=DKM08_06930 NZ_QFYX01000001.1 Protein Homology CDS 1397021 1397629 . + 0 ID=cds-WP_003407722.1;Parent=gene-DKM08_RS06940;Dbxref=GenBank:WP_003407722.1;Name=WP_003407722.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216055.1;locus_tag=DKM08_RS06940;product=signal peptidase II;protein_id=WP_003407722.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1397622 1398548 . + . ID=gene-DKM08_RS06945;Name=DKM08_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06945;old_locus_tag=DKM08_06935 NZ_QFYX01000001.1 Protein Homology CDS 1397622 1398548 . + 0 ID=cds-WP_003407723.1;Parent=gene-DKM08_RS06945;Dbxref=GenBank:WP_003407723.1;Name=WP_003407723.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216056.1;locus_tag=DKM08_RS06945;product=RluA family pseudouridine synthase;protein_id=WP_003407723.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1398555 1399148 . - . ID=gene-DKM08_RS06950;Name=lprI;gbkey=Gene;gene=lprI;gene_biotype=protein_coding;locus_tag=DKM08_RS06950;old_locus_tag=DKM08_06940 NZ_QFYX01000001.1 Protein Homology CDS 1398555 1399148 . - 0 ID=cds-WP_003407725.1;Parent=gene-DKM08_RS06950;Dbxref=GenBank:WP_003407725.1;Name=WP_003407725.1;gbkey=CDS;gene=lprI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216057.1;locus_tag=DKM08_RS06950;product=lysozyme inhibitor LprI family protein;protein_id=WP_003407725.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1399203 1399613 . - . ID=gene-DKM08_RS06955;Name=glbN;gbkey=Gene;gene=glbN;gene_biotype=protein_coding;locus_tag=DKM08_RS06955;old_locus_tag=DKM08_06945 NZ_QFYX01000001.1 Protein Homology CDS 1399203 1399613 . - 0 ID=cds-WP_003407730.1;Parent=gene-DKM08_RS06955;Dbxref=GenBank:WP_003407730.1;Name=WP_003407730.1;gbkey=CDS;gene=glbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216058.1;locus_tag=DKM08_RS06955;product=group 1 truncated hemoglobin GlbN;protein_id=WP_003407730.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1399841 1400866 . + . ID=gene-DKM08_RS06960;Name=DKM08_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06960;old_locus_tag=DKM08_06950 NZ_QFYX01000001.1 Protein Homology CDS 1399841 1400866 . + 0 ID=cds-WP_147020895.1;Parent=gene-DKM08_RS06960;Dbxref=GenBank:WP_147020895.1;Name=WP_147020895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216059.1;locus_tag=DKM08_RS06960;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_147020895.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1400871 1401674 . + . ID=gene-DKM08_RS06965;Name=DKM08_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06965;old_locus_tag=DKM08_06955 NZ_QFYX01000001.1 Protein Homology CDS 1400871 1401674 . + 0 ID=cds-WP_003407737.1;Parent=gene-DKM08_RS06965;Dbxref=GenBank:WP_003407737.1;Name=WP_003407737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216060.1;locus_tag=DKM08_RS06965;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407737.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1401696 1401923 . + . ID=gene-DKM08_RS06970;Name=DKM08_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06970;old_locus_tag=DKM08_06960 NZ_QFYX01000001.1 Protein Homology CDS 1401696 1401923 . + 0 ID=cds-WP_003901194.1;Parent=gene-DKM08_RS06970;Dbxref=GenBank:WP_003901194.1;Name=WP_003901194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216061.1;locus_tag=DKM08_RS06970;product=hypothetical protein;protein_id=WP_003901194.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1401972 1402403 . + . ID=gene-DKM08_RS06975;Name=DKM08_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06975;old_locus_tag=DKM08_06965 NZ_QFYX01000001.1 Protein Homology CDS 1401972 1402403 . + 0 ID=cds-WP_003407748.1;Parent=gene-DKM08_RS06975;Dbxref=GenBank:WP_003407748.1;Name=WP_003407748.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216062.1;locus_tag=DKM08_RS06975;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003407748.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1402471 1406025 . + . ID=gene-DKM08_RS06980;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=DKM08_RS06980;old_locus_tag=DKM08_06970 NZ_QFYX01000001.1 Protein Homology CDS 1402471 1406025 . + 0 ID=cds-WP_003407751.1;Parent=gene-DKM08_RS06980;Dbxref=GenBank:WP_003407751.1;Name=WP_003407751.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216063.1;locus_tag=DKM08_RS06980;product=DNA polymerase III subunit alpha;protein_id=WP_003407751.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1406074 1408110 . - . ID=gene-DKM08_RS06985;Name=DKM08_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06985;old_locus_tag=DKM08_06975 NZ_QFYX01000001.1 Protein Homology CDS 1406074 1408110 . - 0 ID=cds-WP_003903497.1;Parent=gene-DKM08_RS06985;Dbxref=GenBank:WP_003903497.1;Name=WP_003903497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177817.1;locus_tag=DKM08_RS06985;product=PPE family protein;protein_id=WP_003903497.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1408384 1410210 . + . ID=gene-DKM08_RS06990;Name=fadD11;gbkey=Gene;gene=fadD11;gene_biotype=protein_coding;locus_tag=DKM08_RS06990;old_locus_tag=DKM08_06980 NZ_QFYX01000001.1 Protein Homology CDS 1408384 1410210 . + 0 ID=cds-WP_024456068.1;Parent=gene-DKM08_RS06990;Dbxref=GenBank:WP_024456068.1;Name=WP_024456068.1;gbkey=CDS;gene=fadD11;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014380383.1;locus_tag=DKM08_RS06990;product=fatty acid--CoA ligase FadD11;protein_id=WP_024456068.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1410224 1412089 . + . ID=gene-DKM08_RS06995;Name=DKM08_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS06995;old_locus_tag=DKM08_06985 NZ_QFYX01000001.1 Protein Homology CDS 1410224 1412089 . + 0 ID=cds-WP_003407762.1;Parent=gene-DKM08_RS06995;Dbxref=GenBank:WP_003407762.1;Name=WP_003407762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216067.1;locus_tag=DKM08_RS06995;product=lysophospholipid acyltransferase;protein_id=WP_003407762.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1412217 1412450 . + . ID=gene-DKM08_RS07000;Name=DKM08_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07000;old_locus_tag=DKM08_06990 NZ_QFYX01000001.1 Protein Homology CDS 1412217 1412450 . + 0 ID=cds-WP_003407763.1;Parent=gene-DKM08_RS07000;Dbxref=GenBank:WP_003407763.1;Name=WP_003407763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407763.1;locus_tag=DKM08_RS07000;product=hypothetical protein;protein_id=WP_003407763.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1412460 1414211 . + . ID=gene-DKM08_RS07005;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=DKM08_RS07005;old_locus_tag=DKM08_06995 NZ_QFYX01000001.1 Protein Homology CDS 1412460 1414211 . + 0 ID=cds-WP_003898925.1;Parent=gene-DKM08_RS07005;Dbxref=GenBank:WP_003898925.1;Name=WP_003898925.1;Ontology_term=GO:0009061,GO:0000104;gbkey=CDS;gene=frdA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216068.1;locus_tag=DKM08_RS07005;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_003898925.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1414214 1414954 . + . ID=gene-DKM08_RS22070;Name=sdhB;end_range=1414954,.;gbkey=Gene;gene=sdhB;gene_biotype=pseudogene;locus_tag=DKM08_RS22070;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1414214 1414954 . + 0 ID=cds-DKM08_RS22070;Parent=gene-DKM08_RS22070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1414954,.;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216069.1;locus_tag=DKM08_RS22070;partial=true;product=succinate dehydrogenase iron-sulfur subunit;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1414959 1415339 . + . ID=gene-DKM08_RS22075;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=DKM08_RS22075 NZ_QFYX01000001.1 Protein Homology CDS 1414959 1415339 . + 0 ID=cds-WP_003407768.1;Parent=gene-DKM08_RS22075;Dbxref=GenBank:WP_003407768.1;Name=WP_003407768.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216070.1;locus_tag=DKM08_RS22075;product=fumarate reductase subunit C;protein_id=WP_003407768.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1415336 1415713 . + . ID=gene-DKM08_RS22080;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=DKM08_RS22080 NZ_QFYX01000001.1 Protein Homology CDS 1415336 1415713 . + 0 ID=cds-WP_003407771.1;Parent=gene-DKM08_RS22080;Dbxref=GenBank:WP_003407771.1;Name=WP_003407771.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216071.1;locus_tag=DKM08_RS22080;product=fumarate reductase subunit FrdD;protein_id=WP_003407771.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1415781 1416389 . + . ID=gene-DKM08_RS07015;Name=DKM08_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07015;old_locus_tag=DKM08_07005 NZ_QFYX01000001.1 Protein Homology CDS 1415781 1416389 . + 0 ID=cds-WP_003407773.1;Parent=gene-DKM08_RS07015;Dbxref=GenBank:WP_003407773.1;Name=WP_003407773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216072.1;locus_tag=DKM08_RS07015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407773.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1416528 1416974 . + . ID=gene-DKM08_RS07020;Name=DKM08_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07020;old_locus_tag=DKM08_07010 NZ_QFYX01000001.1 Protein Homology CDS 1416528 1416974 . + 0 ID=cds-WP_003903500.1;Parent=gene-DKM08_RS07020;Dbxref=GenBank:WP_003903500.1;Name=WP_003903500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407774.1;locus_tag=DKM08_RS07020;product=MmpS family transport accessory protein;protein_id=WP_003903500.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1416971 1419874 . + . ID=gene-DKM08_RS07025;Name=DKM08_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07025;old_locus_tag=DKM08_07015 NZ_QFYX01000001.1 Protein Homology CDS 1416971 1419874 . + 0 ID=cds-WP_003407779.1;Parent=gene-DKM08_RS07025;Dbxref=GenBank:WP_003407779.1;Name=WP_003407779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293038.1;locus_tag=DKM08_RS07025;product=RND family transporter;protein_id=WP_003407779.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1419884 1420330 . + . ID=gene-DKM08_RS07030;Name=DKM08_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07030;old_locus_tag=DKM08_07020 NZ_QFYX01000001.1 Protein Homology CDS 1419884 1420330 . + 0 ID=cds-WP_003407780.1;Parent=gene-DKM08_RS07030;Dbxref=GenBank:WP_003407780.1;Name=WP_003407780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216074.1;locus_tag=DKM08_RS07030;product=F420H(2)-dependent quinone reductase;protein_id=WP_003407780.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1420365 1421654 . + . ID=gene-DKM08_RS07035;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=DKM08_RS07035;old_locus_tag=DKM08_07025 NZ_QFYX01000001.1 Protein Homology CDS 1420365 1421654 . + 0 ID=cds-WP_003407781.1;Parent=gene-DKM08_RS07035;Dbxref=GenBank:WP_003407781.1;Name=WP_003407781.1;Ontology_term=GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216075.1;locus_tag=DKM08_RS07035;product=threonine ammonia-lyase;protein_id=WP_003407781.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1421707 1421910 . + . ID=gene-DKM08_RS07040;Name=DKM08_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07040;old_locus_tag=DKM08_07030 NZ_QFYX01000001.1 Protein Homology CDS 1421707 1421910 . + 0 ID=cds-WP_009935474.1;Parent=gene-DKM08_RS07040;Dbxref=GenBank:WP_009935474.1;Name=WP_009935474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935474.1;locus_tag=DKM08_RS07040;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_009935474.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1421916 1422320 . + . ID=gene-DKM08_RS07045;Name=vapc11;gbkey=Gene;gene=vapc11;gene_biotype=protein_coding;locus_tag=DKM08_RS07045;old_locus_tag=DKM08_07035 NZ_QFYX01000001.1 Protein Homology CDS 1421916 1422320 . + 0 ID=cds-WP_003407786.1;Parent=gene-DKM08_RS07045;Dbxref=GenBank:WP_003407786.1;Name=WP_003407786.1;gbkey=CDS;gene=vapc11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216077.1;locus_tag=DKM08_RS07045;product=type II toxin-antitoxin system toxin ribonuclease VapC11;protein_id=WP_003407786.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1422337 1424079 . - . ID=gene-DKM08_RS07050;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=DKM08_RS07050;old_locus_tag=DKM08_07040 NZ_QFYX01000001.1 Protein Homology CDS 1422337 1424079 . - 0 ID=cds-WP_010950559.1;Parent=gene-DKM08_RS07050;Dbxref=GenBank:WP_010950559.1;Name=WP_010950559.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177819.1;locus_tag=DKM08_RS07050;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_010950559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1424072 1425563 . - . ID=gene-DKM08_RS07055;Name=DKM08_RS07055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS07055;old_locus_tag=DKM08_07045;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1424072 1425563 . - 0 ID=cds-DKM08_RS07055;Parent=gene-DKM08_RS07055;Note=frameshifted;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169656.1;locus_tag=DKM08_RS07055;product=alpha-amylase family glycosyl hydrolase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1425567 1427732 . - . ID=gene-DKM08_RS07060;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=DKM08_RS07060;old_locus_tag=DKM08_07050 NZ_QFYX01000001.1 Protein Homology CDS 1425567 1427732 . - 0 ID=cds-WP_023349519.1;Parent=gene-DKM08_RS07060;Dbxref=GenBank:WP_023349519.1;Name=WP_023349519.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177821.1;locus_tag=DKM08_RS07060;product=glycogen debranching protein GlgX;protein_id=WP_023349519.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1427771 1429960 . - . ID=gene-DKM08_RS07065;Name=DKM08_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07065;old_locus_tag=DKM08_07055 NZ_QFYX01000001.1 Protein Homology CDS 1427771 1429960 . - 0 ID=cds-WP_003407794.1;Parent=gene-DKM08_RS07065;Dbxref=GenBank:WP_003407794.1;Name=WP_003407794.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216081.1;locus_tag=DKM08_RS07065;product=acyltransferase family protein;protein_id=WP_003407794.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1430059 1430751 . - . ID=gene-DKM08_RS07070;Name=ripD;gbkey=Gene;gene=ripD;gene_biotype=protein_coding;locus_tag=DKM08_RS07070;old_locus_tag=DKM08_07060 NZ_QFYX01000001.1 Protein Homology CDS 1430059 1430751 . - 0 ID=cds-WP_003407798.1;Parent=gene-DKM08_RS07070;Dbxref=GenBank:WP_003407798.1;Name=WP_003407798.1;gbkey=CDS;gene=ripD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216082.1;locus_tag=DKM08_RS07070;product=NlpC/P60 family peptidoglycan-binding protein RipD;protein_id=WP_003407798.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1430991 1431440 . - . ID=gene-DKM08_RS21555;Name=DKM08_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21555 NZ_QFYX01000001.1 Protein Homology CDS 1430991 1431440 . - 0 ID=cds-WP_020424437.1;Parent=gene-DKM08_RS21555;Dbxref=GenBank:WP_020424437.1;Name=WP_020424437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020424437.1;locus_tag=DKM08_RS21555;product=hypothetical protein;protein_id=WP_020424437.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1431523 1432836 . + . ID=gene-DKM08_RS07080;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=DKM08_RS07080;old_locus_tag=DKM08_07070 NZ_QFYX01000001.1 Protein Homology CDS 1431523 1432836 . + 0 ID=cds-WP_003407803.1;Parent=gene-DKM08_RS07080;Dbxref=GenBank:WP_003407803.1;Name=WP_003407803.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216084.1;locus_tag=DKM08_RS07080;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_003407803.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1432833 1433993 . + . ID=gene-DKM08_RS07085;Name=DKM08_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07085;old_locus_tag=DKM08_07075 NZ_QFYX01000001.1 Protein Homology CDS 1432833 1433993 . + 0 ID=cds-WP_003407805.1;Parent=gene-DKM08_RS07085;Dbxref=GenBank:WP_003407805.1;Name=WP_003407805.1;Ontology_term=GO:0009102,GO:0008710,GO:0030170,GO:0042803;gbkey=CDS;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA,pyridoxal phosphate binding|0030170||IEA,protein homodimerization activity|0042803||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177822.1;locus_tag=DKM08_RS07085;product=8-amino-7-oxononanoate synthase;protein_id=WP_003407805.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1433990 1434670 . + . ID=gene-DKM08_RS07090;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=DKM08_RS07090;old_locus_tag=DKM08_07080 NZ_QFYX01000001.1 Protein Homology CDS 1433990 1434670 . + 0 ID=cds-WP_003407806.1;Parent=gene-DKM08_RS07090;Dbxref=GenBank:WP_003407806.1;Name=WP_003407806.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216086.1;locus_tag=DKM08_RS07090;product=dethiobiotin synthase;protein_id=WP_003407806.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1434670 1435179 . + . ID=gene-DKM08_RS07095;Name=DKM08_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07095;old_locus_tag=DKM08_07085 NZ_QFYX01000001.1 Protein Homology CDS 1434670 1435179 . + 0 ID=cds-WP_003407809.1;Parent=gene-DKM08_RS07095;Dbxref=GenBank:WP_003407809.1;Name=WP_003407809.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216087.1;locus_tag=DKM08_RS07095;product=2'-5' RNA ligase family protein;protein_id=WP_003407809.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1435445 1435855 . + . ID=gene-DKM08_RS07110;Name=DKM08_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07110;old_locus_tag=DKM08_07100 NZ_QFYX01000001.1 Protein Homology CDS 1435445 1435855 . + 0 ID=cds-WP_003904648.1;Parent=gene-DKM08_RS07110;Dbxref=GenBank:WP_003904648.1;Name=WP_003904648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216089.1;locus_tag=DKM08_RS07110;product=hypothetical protein;protein_id=WP_003904648.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1435821 1436372 . + . ID=gene-DKM08_RS21835;Name=DKM08_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21835 NZ_QFYX01000001.1 Protein Homology CDS 1435821 1436372 . + 0 ID=cds-WP_144080268.1;Parent=gene-DKM08_RS21835;Dbxref=GenBank:WP_144080268.1;Name=WP_144080268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914987.1;locus_tag=DKM08_RS21835;product=hypothetical protein;protein_id=WP_144080268.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1436401 1436553 . - . ID=gene-DKM08_RS21560;Name=DKM08_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21560 NZ_QFYX01000001.1 Protein Homology CDS 1436401 1436553 . - 0 ID=cds-WP_017351282.1;Parent=gene-DKM08_RS21560;Dbxref=GenBank:WP_017351282.1;Name=WP_017351282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351282.1;locus_tag=DKM08_RS21560;product=hypothetical protein;protein_id=WP_017351282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1436774 1438195 . - . ID=gene-DKM08_RS07125;Name=DKM08_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07125;old_locus_tag=DKM08_07115 NZ_QFYX01000001.1 Protein Homology CDS 1436774 1438195 . - 0 ID=cds-WP_010950563.1;Parent=gene-DKM08_RS07125;Dbxref=GenBank:WP_010950563.1;Name=WP_010950563.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216092.1;locus_tag=DKM08_RS07125;product=phage major capsid protein;protein_id=WP_010950563.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1438203 1438736 . - . ID=gene-DKM08_RS07130;Name=DKM08_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07130;old_locus_tag=DKM08_07120 NZ_QFYX01000001.1 Protein Homology CDS 1438203 1438736 . - 0 ID=cds-WP_003914984.1;Parent=gene-DKM08_RS07130;Dbxref=GenBank:WP_003914984.1;Name=WP_003914984.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217167.1;locus_tag=DKM08_RS07130;product=HK97 family phage prohead protease;protein_id=WP_003914984.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1438889 1439359 . - . ID=gene-DKM08_RS07135;Name=DKM08_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07135;old_locus_tag=DKM08_07125 NZ_QFYX01000001.1 Protein Homology CDS 1438889 1439359 . - 0 ID=cds-WP_003900701.1;Parent=gene-DKM08_RS07135;Dbxref=GenBank:WP_003900701.1;Name=WP_003900701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216094.1;locus_tag=DKM08_RS07135;product=phage terminase small subunit P27 family;protein_id=WP_003900701.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1439440 1439754 . - . ID=gene-DKM08_RS07140;Name=DKM08_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07140;old_locus_tag=DKM08_07130 NZ_QFYX01000001.1 Protein Homology CDS 1439440 1439754 . - 0 ID=cds-WP_003900700.1;Parent=gene-DKM08_RS07140;Dbxref=GenBank:WP_003900700.1;Name=WP_003900700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216095.1;locus_tag=DKM08_RS07140;product=hypothetical protein;protein_id=WP_003900700.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1439751 1440023 . - . ID=gene-DKM08_RS07145;Name=DKM08_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07145;old_locus_tag=DKM08_07135 NZ_QFYX01000001.1 Protein Homology CDS 1439751 1440023 . - 0 ID=cds-WP_003900699.1;Parent=gene-DKM08_RS07145;Dbxref=GenBank:WP_003900699.1;Name=WP_003900699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216096.1;locus_tag=DKM08_RS07145;product=hypothetical protein;protein_id=WP_003900699.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1440037 1440432 . - . ID=gene-DKM08_RS07150;Name=DKM08_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07150;old_locus_tag=DKM08_07140 NZ_QFYX01000001.1 Protein Homology CDS 1440037 1440432 . - 0 ID=cds-WP_003900698.1;Parent=gene-DKM08_RS07150;Dbxref=GenBank:WP_003900698.1;Name=WP_003900698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216097.1;locus_tag=DKM08_RS07150;product=hypothetical protein;protein_id=WP_003900698.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1440628 1442043 . - . ID=gene-DKM08_RS07155;Name=DKM08_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07155;old_locus_tag=DKM08_07145 NZ_QFYX01000001.1 Protein Homology CDS 1440628 1442043 . - 0 ID=cds-WP_010950564.1;Parent=gene-DKM08_RS07155;Dbxref=GenBank:WP_010950564.1;Name=WP_010950564.1;Ontology_term=GO:0006260,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216098.1;locus_tag=DKM08_RS07155;product=phage/plasmid primase%2C P4 family;protein_id=WP_010950564.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1442043 1442441 . - . ID=gene-DKM08_RS07160;Name=DKM08_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07160;old_locus_tag=DKM08_07150 NZ_QFYX01000001.1 Protein Homology CDS 1442043 1442441 . - 0 ID=cds-WP_010950565.1;Parent=gene-DKM08_RS07160;Dbxref=GenBank:WP_010950565.1;Name=WP_010950565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216099.1;locus_tag=DKM08_RS07160;product=DUF2742 domain-containing protein;protein_id=WP_010950565.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1442438 1442659 . - . ID=gene-DKM08_RS07165;Name=DKM08_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07165;old_locus_tag=DKM08_07155 NZ_QFYX01000001.1 Protein Homology CDS 1442438 1442659 . - 0 ID=cds-WP_003900694.1;Parent=gene-DKM08_RS07165;Dbxref=GenBank:WP_003900694.1;Name=WP_003900694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216100.1;locus_tag=DKM08_RS07165;product=hypothetical protein;protein_id=WP_003900694.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1442715 1443230 . - . ID=gene-DKM08_RS07170;Name=DKM08_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07170;old_locus_tag=DKM08_07160 NZ_QFYX01000001.1 Protein Homology CDS 1442715 1443230 . - 0 ID=cds-WP_003903978.1;Parent=gene-DKM08_RS07170;Dbxref=GenBank:WP_003903978.1;Name=WP_003903978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216101.1;locus_tag=DKM08_RS07170;product=hypothetical protein;protein_id=WP_003903978.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1443227 1444636 . - . ID=gene-DKM08_RS07175;Name=DKM08_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07175;old_locus_tag=DKM08_07165 NZ_QFYX01000001.1 Protein Homology CDS 1443227 1444636 . - 0 ID=cds-WP_003903979.1;Parent=gene-DKM08_RS07175;Dbxref=GenBank:WP_003903979.1;Name=WP_003903979.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216102.1;locus_tag=DKM08_RS07175;product=recombinase family protein;protein_id=WP_003903979.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1444623 1445967 . - . ID=gene-DKM08_RS21565;Name=DKM08_RS21565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21565;old_locus_tag=DKM08_07170;partial=true;pseudo=true;start_range=.,1444623 NZ_QFYX01000001.1 Protein Homology CDS 1444623 1445967 . - 0 ID=cds-DKM08_RS21565;Parent=gene-DKM08_RS21565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=DKM08_RS21565;partial=true;product=HNH endonuclease signature motif containing protein;pseudo=true;start_range=.,1444623;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1446415 1447464 . + . ID=gene-DKM08_RS07190;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=DKM08_RS07190;old_locus_tag=DKM08_07180 NZ_QFYX01000001.1 Protein Homology CDS 1446415 1447464 . + 0 ID=cds-WP_003898934.1;Parent=gene-DKM08_RS07190;Dbxref=GenBank:WP_003898934.1;Name=WP_003898934.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216105.1;locus_tag=DKM08_RS07190;product=biotin synthase BioB;protein_id=WP_003898934.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1447465 1447704 . + . ID=gene-DKM08_RS07195;Name=DKM08_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07195;old_locus_tag=DKM08_07185 NZ_QFYX01000001.1 Protein Homology CDS 1447465 1447704 . + 0 ID=cds-WP_003407914.1;Parent=gene-DKM08_RS07195;Dbxref=GenBank:WP_003407914.1;Name=WP_003407914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216106.1;locus_tag=DKM08_RS07195;product=hypothetical protein;protein_id=WP_003407914.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1447701 1448366 . + . ID=gene-DKM08_RS07200;Name=DKM08_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07200;old_locus_tag=DKM08_07190 NZ_QFYX01000001.1 Protein Homology CDS 1447701 1448366 . + 0 ID=cds-WP_003407924.1;Parent=gene-DKM08_RS07200;Dbxref=GenBank:WP_003407924.1;Name=WP_003407924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216107.1;locus_tag=DKM08_RS07200;product=DUF2567 domain-containing protein;protein_id=WP_003407924.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1448531 1449871 . - . ID=gene-DKM08_RS07205;Name=DKM08_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07205;old_locus_tag=DKM08_07195 NZ_QFYX01000001.1 Protein Homology CDS 1448531 1449871 . - 0 ID=cds-WP_003407926.1;Parent=gene-DKM08_RS07205;Dbxref=GenBank:WP_003407926.1;Name=WP_003407926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216108.1;locus_tag=DKM08_RS07205;product=lipase family protein;protein_id=WP_003407926.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1450128 1450838 . - . ID=gene-DKM08_RS07210;Name=DKM08_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07210;old_locus_tag=DKM08_07200 NZ_QFYX01000001.1 Protein Homology CDS 1450128 1450838 . - 0 ID=cds-WP_003898937.1;Parent=gene-DKM08_RS07210;Dbxref=GenBank:WP_003898937.1;Name=WP_003898937.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216109.1;locus_tag=DKM08_RS07210;product=NUDIX hydrolase;protein_id=WP_003898937.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1450887 1451936 . + . ID=gene-DKM08_RS07215;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=DKM08_RS07215;old_locus_tag=DKM08_07205 NZ_QFYX01000001.1 Protein Homology CDS 1450887 1451936 . + 0 ID=cds-WP_003407931.1;Parent=gene-DKM08_RS07215;Dbxref=GenBank:WP_003407931.1;Name=WP_003407931.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011894476.1;locus_tag=DKM08_RS07215;product=quinolinate synthase NadA;protein_id=WP_003407931.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1451936 1453519 . + . ID=gene-DKM08_RS07220;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=DKM08_RS07220;old_locus_tag=DKM08_07210 NZ_QFYX01000001.1 Protein Homology CDS 1451936 1453519 . + 0 ID=cds-WP_003901204.1;Parent=gene-DKM08_RS07220;Dbxref=GenBank:WP_003901204.1;Name=WP_003901204.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216111.1;locus_tag=DKM08_RS07220;product=L-aspartate oxidase;protein_id=WP_003901204.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1453519 1454376 . + . ID=gene-DKM08_RS07225;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=DKM08_RS07225;old_locus_tag=DKM08_07215 NZ_QFYX01000001.1 Protein Homology CDS 1453519 1454376 . + 0 ID=cds-WP_003407935.1;Parent=gene-DKM08_RS07225;Dbxref=GenBank:WP_003407935.1;Name=WP_003407935.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216112.1;locus_tag=DKM08_RS07225;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_003407935.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1454425 1455183 . + . ID=gene-DKM08_RS07230;Name=DKM08_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07230;old_locus_tag=DKM08_07220 NZ_QFYX01000001.1 Protein Homology CDS 1454425 1455183 . + 0 ID=cds-WP_003898940.1;Parent=gene-DKM08_RS07230;Dbxref=GenBank:WP_003898940.1;Name=WP_003898940.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216113.1;locus_tag=DKM08_RS07230;product=methyltransferase domain-containing protein;protein_id=WP_003898940.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1455204 1455614 . - . ID=gene-DKM08_RS07235;Name=DKM08_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07235;old_locus_tag=DKM08_07225 NZ_QFYX01000001.1 Protein Homology CDS 1455204 1455614 . - 0 ID=cds-WP_003407939.1;Parent=gene-DKM08_RS07235;Dbxref=GenBank:WP_003407939.1;Name=WP_003407939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216114.1;locus_tag=DKM08_RS07235;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003407939.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1455714 1457030 . + . ID=gene-DKM08_RS07240;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=DKM08_RS07240;old_locus_tag=DKM08_07230 NZ_QFYX01000001.1 Protein Homology CDS 1455714 1457030 . + 0 ID=cds-WP_003407943.1;Parent=gene-DKM08_RS07240;Dbxref=GenBank:WP_003407943.1;Name=WP_003407943.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216115.1;locus_tag=DKM08_RS07240;product=histidinol dehydrogenase;protein_id=WP_003407943.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1457027 1458169 . + . ID=gene-DKM08_RS07245;Name=DKM08_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07245;old_locus_tag=DKM08_07235 NZ_QFYX01000001.1 Protein Homology CDS 1457027 1458169 . + 0 ID=cds-WP_003407947.1;Parent=gene-DKM08_RS07245;Dbxref=GenBank:WP_003407947.1;Name=WP_003407947.1;Ontology_term=GO:0000105,GO:0004400,GO:0030170;gbkey=CDS;go_function=histidinol-phosphate transaminase activity|0004400||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177823.1;locus_tag=DKM08_RS07245;product=histidinol-phosphate transaminase;protein_id=WP_003407947.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1458166 1458798 . + . ID=gene-DKM08_RS07250;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=DKM08_RS07250;old_locus_tag=DKM08_07240 NZ_QFYX01000001.1 Protein Homology CDS 1458166 1458798 . + 0 ID=cds-WP_003407950.1;Parent=gene-DKM08_RS07250;Dbxref=GenBank:WP_003407950.1;Name=WP_003407950.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216117.1;locus_tag=DKM08_RS07250;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_003407950.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1458795 1459415 . + . ID=gene-DKM08_RS07255;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=DKM08_RS07255;old_locus_tag=DKM08_07245 NZ_QFYX01000001.1 Protein Homology CDS 1458795 1459415 . + 0 ID=cds-WP_003407952.1;Parent=gene-DKM08_RS07255;Dbxref=GenBank:WP_003407952.1;Name=WP_003407952.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216118.1;locus_tag=DKM08_RS07255;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_003407952.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1459425 1460162 . + . ID=gene-DKM08_RS07260;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=DKM08_RS07260;old_locus_tag=DKM08_07250 NZ_QFYX01000001.1 Protein Homology CDS 1459425 1460162 . + 0 ID=cds-WP_003900374.1;Parent=gene-DKM08_RS07260;Dbxref=GenBank:WP_003900374.1;Name=WP_003900374.1;Ontology_term=GO:0000105,GO:0000162,GO:0003949,GO:0004640,GO:0005737;gbkey=CDS;gene=priA;go_component=cytoplasm|0005737||IEA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-histidine biosynthetic process|0000105||IEA,L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216119.1;locus_tag=DKM08_RS07260;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=WP_003900374.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1460170 1460982 . + . ID=gene-DKM08_RS07265;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=DKM08_RS07265;old_locus_tag=DKM08_07255 NZ_QFYX01000001.1 Protein Homology CDS 1460170 1460982 . + 0 ID=cds-WP_010950567.1;Parent=gene-DKM08_RS07265;Dbxref=GenBank:WP_010950567.1;Name=WP_010950567.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216120.1;locus_tag=DKM08_RS07265;product=inositol monophosphatase family protein;protein_id=WP_010950567.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1460984 1461787 . + . ID=gene-DKM08_RS07270;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=DKM08_RS07270;old_locus_tag=DKM08_07260 NZ_QFYX01000001.1 Protein Homology CDS 1460984 1461787 . + 0 ID=cds-WP_003407959.1;Parent=gene-DKM08_RS07270;Dbxref=GenBank:WP_003407959.1;Name=WP_003407959.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216121.1;locus_tag=DKM08_RS07270;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_003407959.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1461784 1462131 . + . ID=gene-DKM08_RS07275;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=DKM08_RS07275;old_locus_tag=DKM08_07265 NZ_QFYX01000001.1 Protein Homology CDS 1461784 1462131 . + 0 ID=cds-WP_003407963.1;Parent=gene-DKM08_RS07275;Dbxref=GenBank:WP_003407963.1;Name=WP_003407963.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216638.2;locus_tag=DKM08_RS07275;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_003407963.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1462312 1463394 . + . ID=gene-DKM08_RS07280;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=DKM08_RS07280;old_locus_tag=DKM08_07270 NZ_QFYX01000001.1 Protein Homology CDS 1462312 1463394 . + 0 ID=cds-WP_023349521.1;Parent=gene-DKM08_RS07280;Dbxref=GenBank:WP_023349521.1;Name=WP_023349521.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216123.1;locus_tag=DKM08_RS07280;product=calcium:proton antiporter;protein_id=WP_023349521.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1463429 1463893 . - . ID=gene-DKM08_RS07285;Name=bcpB;gbkey=Gene;gene=bcpB;gene_biotype=protein_coding;locus_tag=DKM08_RS07285;old_locus_tag=DKM08_07275 NZ_QFYX01000001.1 Protein Homology CDS 1463429 1463893 . - 0 ID=cds-WP_003407974.1;Parent=gene-DKM08_RS07285;Dbxref=GenBank:WP_003407974.1;Name=WP_003407974.1;gbkey=CDS;gene=bcpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216124.1;locus_tag=DKM08_RS07285;product=peroxiredoxin BcpB;protein_id=WP_003407974.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1464034 1465584 . + . ID=gene-DKM08_RS07290;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=DKM08_RS07290;old_locus_tag=DKM08_07280 NZ_QFYX01000001.1 Protein Homology CDS 1464034 1465584 . + 0 ID=cds-WP_003407977.1;Parent=gene-DKM08_RS07290;Dbxref=GenBank:WP_003407977.1;Name=WP_003407977.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216125.1;locus_tag=DKM08_RS07290;product=anthranilate synthase component I;protein_id=WP_003407977.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1465574 1466281 . + . ID=gene-DKM08_RS07295;Name=DKM08_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07295;old_locus_tag=DKM08_07285 NZ_QFYX01000001.1 Protein Homology CDS 1465574 1466281 . + 0 ID=cds-WP_003407980.1;Parent=gene-DKM08_RS07295;Dbxref=GenBank:WP_003407980.1;Name=WP_003407980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216126.1;locus_tag=DKM08_RS07295;product=TIGR02234 family membrane protein;protein_id=WP_003407980.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1466371 1467189 . + . ID=gene-DKM08_RS07300;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=DKM08_RS07300;old_locus_tag=DKM08_07290 NZ_QFYX01000001.1 Protein Homology CDS 1466371 1467189 . + 0 ID=cds-WP_003407990.1;Parent=gene-DKM08_RS07300;Dbxref=GenBank:WP_003407990.1;Name=WP_003407990.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216127.1;locus_tag=DKM08_RS07300;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_003407990.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1467225 1468490 . + . ID=gene-DKM08_RS07305;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=DKM08_RS07305;old_locus_tag=DKM08_07295 NZ_QFYX01000001.1 Protein Homology CDS 1467225 1468490 . + 0 ID=cds-WP_016721143.1;Parent=gene-DKM08_RS07305;Dbxref=GenBank:WP_016721143.1;Name=WP_016721143.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016721143.1;locus_tag=DKM08_RS07305;product=tryptophan synthase subunit beta;protein_id=WP_016721143.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1468490 1469302 . + . ID=gene-DKM08_RS07310;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=DKM08_RS07310;old_locus_tag=DKM08_07300 NZ_QFYX01000001.1 Protein Homology CDS 1468490 1469302 . + 0 ID=cds-WP_003407999.1;Parent=gene-DKM08_RS07310;Dbxref=GenBank:WP_003407999.1;Name=WP_003407999.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216129.1;locus_tag=DKM08_RS07310;product=tryptophan synthase subunit alpha;protein_id=WP_003407999.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1469302 1470708 . + . ID=gene-DKM08_RS07315;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=DKM08_RS07315;old_locus_tag=DKM08_07305 NZ_QFYX01000001.1 Protein Homology CDS 1469302 1470708 . + 0 ID=cds-WP_003408002.1;Parent=gene-DKM08_RS07315;Dbxref=GenBank:WP_003408002.1;Name=WP_003408002.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216130.1;locus_tag=DKM08_RS07315;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_003408002.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1471384 1471824 . + . ID=gene-DKM08_RS07325;Name=DKM08_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07325;old_locus_tag=DKM08_07315 NZ_QFYX01000001.1 Protein Homology CDS 1471384 1471824 . + 0 ID=cds-WP_003408004.1;Parent=gene-DKM08_RS07325;Dbxref=GenBank:WP_003408004.1;Name=WP_003408004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216131.1;locus_tag=DKM08_RS07325;product=NINE protein;protein_id=WP_003408004.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1471814 1472212 . + . ID=gene-DKM08_RS07330;Name=DKM08_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07330;old_locus_tag=DKM08_07320 NZ_QFYX01000001.1 Protein Homology CDS 1471814 1472212 . + 0 ID=cds-WP_003408005.1;Parent=gene-DKM08_RS07330;Dbxref=GenBank:WP_003408005.1;Name=WP_003408005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216132.1;locus_tag=DKM08_RS07330;product=DUF2752 domain-containing protein;protein_id=WP_003408005.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1472320 1473738 . + . ID=gene-DKM08_RS07335;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=DKM08_RS07335;old_locus_tag=DKM08_07325 NZ_QFYX01000001.1 Protein Homology CDS 1472320 1473738 . + 0 ID=cds-WP_003898945.1;Parent=gene-DKM08_RS07335;Dbxref=GenBank:WP_003898945.1;Name=WP_003898945.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216133.1;locus_tag=DKM08_RS07335;product=pyruvate kinase;protein_id=WP_003898945.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1473746 1474648 . + . ID=gene-DKM08_RS07340;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=DKM08_RS07340;old_locus_tag=DKM08_07330 NZ_QFYX01000001.1 Protein Homology CDS 1473746 1474648 . + 0 ID=cds-WP_003408017.1;Parent=gene-DKM08_RS07340;Dbxref=GenBank:WP_003408017.1;Name=WP_003408017.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216134.1;locus_tag=DKM08_RS07340;product=acyl-CoA thioesterase II;protein_id=WP_003408017.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1474706 1476160 . + . ID=gene-DKM08_RS07345;Name=DKM08_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07345;old_locus_tag=DKM08_07335 NZ_QFYX01000001.1 Protein Homology CDS 1474706 1476160 . + 0 ID=cds-WP_003900378.1;Parent=gene-DKM08_RS07345;Dbxref=GenBank:WP_003900378.1;Name=WP_003900378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216135.1;locus_tag=DKM08_RS07345;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_003900378.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1476094 1477824 . - . ID=gene-DKM08_RS07350;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=DKM08_RS07350;old_locus_tag=DKM08_07340 NZ_QFYX01000001.1 Protein Homology CDS 1476094 1477824 . - 0 ID=cds-WP_003908715.1;Parent=gene-DKM08_RS07350;Dbxref=GenBank:WP_003908715.1;Name=WP_003908715.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216136.1;locus_tag=DKM08_RS07350;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_003908715.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1477821 1479428 . - . ID=gene-DKM08_RS07355;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=DKM08_RS07355;old_locus_tag=DKM08_07345 NZ_QFYX01000001.1 Protein Homology CDS 1477821 1479428 . - 0 ID=cds-WP_071854213.1;Parent=gene-DKM08_RS07355;Dbxref=GenBank:WP_071854213.1;Name=WP_071854213.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020725080.1;locus_tag=DKM08_RS07355;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_071854213.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1479491 1480531 . - . ID=gene-DKM08_RS07360;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=DKM08_RS07360;old_locus_tag=DKM08_07350 NZ_QFYX01000001.1 Protein Homology CDS 1479491 1480531 . - 0 ID=cds-WP_003408024.1;Parent=gene-DKM08_RS07360;Dbxref=GenBank:WP_003408024.1;Name=WP_003408024.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216138.1;locus_tag=DKM08_RS07360;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_003408024.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1480561 1482018 . - . ID=gene-DKM08_RS07365;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=DKM08_RS07365;old_locus_tag=DKM08_07355 NZ_QFYX01000001.1 Protein Homology CDS 1480561 1482018 . - 0 ID=cds-WP_003408027.1;Parent=gene-DKM08_RS07365;Dbxref=GenBank:WP_003408027.1;Name=WP_003408027.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;gene=cydA;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177824.1;locus_tag=DKM08_RS07365;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_003408027.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1482129 1482716 . - . ID=gene-DKM08_RS07370;Name=DKM08_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07370;old_locus_tag=DKM08_07360 NZ_QFYX01000001.1 Protein Homology CDS 1482129 1482716 . - 0 ID=cds-WP_003408030.1;Parent=gene-DKM08_RS07370;Dbxref=GenBank:WP_003408030.1;Name=WP_003408030.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216140.1;locus_tag=DKM08_RS07370;product=HdeD family acid-resistance protein;protein_id=WP_003408030.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1482745 1484071 . - . ID=gene-DKM08_RS07375;Name=cya;gbkey=Gene;gene=cya;gene_biotype=pseudogene;locus_tag=DKM08_RS07375;old_locus_tag=DKM08_07365;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1482745 1484071 . - 0 ID=cds-DKM08_RS07375;Parent=gene-DKM08_RS07375;Note=frameshifted;gbkey=CDS;gene=cya;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216141.2;locus_tag=DKM08_RS07375;product=adenylate cyclase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1484138 1484214 . - . ID=gene-DKM08_RS07380;Name=DKM08_RS07380;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS07380;old_locus_tag=DKM08_07370 NZ_QFYX01000001.1 tRNAscan-SE tRNA 1484138 1484214 . - . ID=rna-DKM08_RS07380;Parent=gene-DKM08_RS07380;anticodon=(pos:complement(1484178..1484180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS07380;product=tRNA-Leu NZ_QFYX01000001.1 tRNAscan-SE exon 1484138 1484214 . - . ID=exon-DKM08_RS07380-1;Parent=rna-DKM08_RS07380;anticodon=(pos:complement(1484178..1484180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS07380;product=tRNA-Leu NZ_QFYX01000001.1 RefSeq gene 1484306 1484923 . + . ID=gene-DKM08_RS07385;Name=DKM08_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07385;old_locus_tag=DKM08_07375 NZ_QFYX01000001.1 Protein Homology CDS 1484306 1484923 . + 0 ID=cds-WP_003408045.1;Parent=gene-DKM08_RS07385;Dbxref=GenBank:WP_003408045.1;Name=WP_003408045.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216142.1;locus_tag=DKM08_RS07385;product=ANTAR domain-containing response regulator;protein_id=WP_003408045.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1484991 1486199 . - . ID=gene-DKM08_RS07390;Name=DKM08_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07390;old_locus_tag=DKM08_07380 NZ_QFYX01000001.1 Protein Homology CDS 1484991 1486199 . - 0 ID=cds-WP_003408054.1;Parent=gene-DKM08_RS07390;Dbxref=GenBank:WP_003408054.1;Name=WP_003408054.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216143.1;locus_tag=DKM08_RS07390;product=lipid-transfer protein;protein_id=WP_003408054.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1486196 1486687 . - . ID=gene-DKM08_RS07395;Name=DKM08_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07395;old_locus_tag=DKM08_07385 NZ_QFYX01000001.1 Protein Homology CDS 1486196 1486687 . - 0 ID=cds-WP_003408058.1;Parent=gene-DKM08_RS07395;Dbxref=GenBank:WP_003408058.1;Name=WP_003408058.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216144.1;locus_tag=DKM08_RS07395;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003408058.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1486791 1489505 . + . ID=gene-DKM08_RS07400;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=DKM08_RS07400;old_locus_tag=DKM08_07390 NZ_QFYX01000001.1 Protein Homology CDS 1486791 1489505 . + 0 ID=cds-WP_003408063.1;Parent=gene-DKM08_RS07400;Dbxref=GenBank:WP_003408063.1;Name=WP_003408063.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216145.1;locus_tag=DKM08_RS07400;product=DNA polymerase I;protein_id=WP_003408063.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1489668 1491113 . + . ID=gene-DKM08_RS07405;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=DKM08_RS07405;old_locus_tag=DKM08_07395 NZ_QFYX01000001.1 Protein Homology CDS 1489668 1491113 . + 0 ID=cds-WP_010950568.1;Parent=gene-DKM08_RS07405;Dbxref=GenBank:WP_010950568.1;Name=WP_010950568.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216146.1;locus_tag=DKM08_RS07405;product=30S ribosomal protein S1;protein_id=WP_010950568.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1491139 1492362 . + . ID=gene-DKM08_RS07410;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=DKM08_RS07410;old_locus_tag=DKM08_07400 NZ_QFYX01000001.1 Protein Homology CDS 1491139 1492362 . + 0 ID=cds-WP_003408069.1;Parent=gene-DKM08_RS07410;Dbxref=GenBank:WP_003408069.1;Name=WP_003408069.1;Ontology_term=GO:0015937,GO:0004140,GO:0005524;gbkey=CDS;gene=coaE;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216147.1;locus_tag=DKM08_RS07410;product=dephospho-CoA kinase;protein_id=WP_003408069.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1492401 1492517 . + . ID=gene-DKM08_RS22690;Name=DKM08_RS22690;end_range=1492517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22690;old_locus_tag=DKM08_07405;partial=true;pseudo=true;start_range=.,1492401 NZ_QFYX01000001.1 Protein Homology CDS 1492401 1492517 . + 0 ID=cds-DKM08_RS22690;Parent=gene-DKM08_RS22690;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1492517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=DKM08_RS22690;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1492401;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1492513 1492956 . - . ID=gene-DKM08_RS07420;Name=DKM08_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07420;old_locus_tag=DKM08_07410 NZ_QFYX01000001.1 Protein Homology CDS 1492513 1492956 . - 0 ID=cds-WP_003898953.1;Parent=gene-DKM08_RS07420;Dbxref=GenBank:WP_003898953.1;Name=WP_003898953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216148.1;locus_tag=DKM08_RS07420;product=DUF402 domain-containing protein;protein_id=WP_003898953.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1493138 1495297 . + . ID=gene-DKM08_RS07430;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=DKM08_RS07430;old_locus_tag=DKM08_07420 NZ_QFYX01000001.1 Protein Homology CDS 1493138 1495297 . + 0 ID=cds-WP_003911575.1;Parent=gene-DKM08_RS07430;Dbxref=GenBank:WP_003911575.1;Name=WP_003911575.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019731486.1;locus_tag=DKM08_RS07430;product=excinuclease ABC subunit UvrB;protein_id=WP_003911575.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1495294 1496709 . + . ID=gene-DKM08_RS07435;Name=DKM08_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07435;old_locus_tag=DKM08_07425 NZ_QFYX01000001.1 Protein Homology CDS 1495294 1496709 . + 0 ID=cds-WP_003408079.1;Parent=gene-DKM08_RS07435;Dbxref=GenBank:WP_003408079.1;Name=WP_003408079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216150.1;locus_tag=DKM08_RS07435;product=MFS transporter;protein_id=WP_003408079.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1496698 1498368 . - . ID=gene-DKM08_RS07440;Name=DKM08_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07440;old_locus_tag=DKM08_07430 NZ_QFYX01000001.1 Protein Homology CDS 1496698 1498368 . - 0 ID=cds-WP_003408080.1;Parent=gene-DKM08_RS07440;Dbxref=GenBank:WP_003408080.1;Name=WP_003408080.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216151.1;locus_tag=DKM08_RS07440;product=glycosyltransferase family 39 protein;protein_id=WP_003408080.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1498577 1499017 . + . ID=gene-DKM08_RS07450;Name=DKM08_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07450;old_locus_tag=DKM08_07440 NZ_QFYX01000001.1 Protein Homology CDS 1498577 1499017 . + 0 ID=cds-WP_003408085.1;Parent=gene-DKM08_RS07450;Dbxref=GenBank:WP_003408085.1;Name=WP_003408085.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216152.1;locus_tag=DKM08_RS07450;product=universal stress protein;protein_id=WP_003408085.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1499024 1499701 . - . ID=gene-DKM08_RS07455;Name=DKM08_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07455;old_locus_tag=DKM08_07445 NZ_QFYX01000001.1 Protein Homology CDS 1499024 1499701 . - 0 ID=cds-WP_003408088.1;Parent=gene-DKM08_RS07455;Dbxref=GenBank:WP_003408088.1;Name=WP_003408088.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003408088.1;locus_tag=DKM08_RS07455;product=MBL fold metallo-hydrolase;protein_id=WP_003408088.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1499867 1502785 . + . ID=gene-DKM08_RS07460;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=DKM08_RS07460;old_locus_tag=DKM08_07450 NZ_QFYX01000001.1 Protein Homology CDS 1499867 1502785 . + 0 ID=cds-WP_003408092.1;Parent=gene-DKM08_RS07460;Dbxref=GenBank:WP_003408092.1;Name=WP_003408092.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216154.1;locus_tag=DKM08_RS07460;product=excinuclease ABC subunit UvrA;protein_id=WP_003408092.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1502842 1503099 . - . ID=gene-DKM08_RS07465;Name=DKM08_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07465;old_locus_tag=DKM08_07455 NZ_QFYX01000001.1 Protein Homology CDS 1502842 1503099 . - 0 ID=cds-WP_003408096.1;Parent=gene-DKM08_RS07465;Dbxref=GenBank:WP_003408096.1;Name=WP_003408096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177650.1;locus_tag=DKM08_RS07465;product=hypothetical protein;protein_id=WP_003408096.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1503115 1504584 . - . ID=gene-DKM08_RS07470;Name=DKM08_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07470;old_locus_tag=DKM08_07460 NZ_QFYX01000001.1 Protein Homology CDS 1503115 1504584 . - 0 ID=cds-WP_003408099.1;Parent=gene-DKM08_RS07470;Dbxref=GenBank:WP_003408099.1;Name=WP_003408099.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216155.1;locus_tag=DKM08_RS07470;product=alpha/beta hydrolase;protein_id=WP_003408099.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1504643 1507978 . - . ID=gene-DKM08_RS07475;Name=lysX;gbkey=Gene;gene=lysX;gene_biotype=protein_coding;locus_tag=DKM08_RS07475;old_locus_tag=DKM08_07465 NZ_QFYX01000001.1 Protein Homology CDS 1504643 1507978 . - 0 ID=cds-WP_031702140.1;Parent=gene-DKM08_RS07475;Dbxref=GenBank:WP_031702140.1;Name=WP_031702140.1;Ontology_term=GO:0006430,GO:0000166,GO:0003676,GO:0004824,GO:0005524;gbkey=CDS;gene=lysX;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011560376.1;locus_tag=DKM08_RS07475;product=bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX;protein_id=WP_031702140.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1508398 1509003 . + . ID=gene-DKM08_RS07480;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=DKM08_RS07480;old_locus_tag=DKM08_07470 NZ_QFYX01000001.1 Protein Homology CDS 1508398 1509003 . + 0 ID=cds-WP_003901217.1;Parent=gene-DKM08_RS07480;Dbxref=GenBank:WP_003901217.1;Name=WP_003901217.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216157.1;locus_tag=DKM08_RS07480;product=translation initiation factor IF-3;protein_id=WP_003901217.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1509053 1509247 . + . ID=gene-DKM08_RS07485;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=DKM08_RS07485;old_locus_tag=DKM08_07475 NZ_QFYX01000001.1 Protein Homology CDS 1509053 1509247 . + 0 ID=cds-WP_003408106.1;Parent=gene-DKM08_RS07485;Dbxref=GenBank:WP_003408106.1;Name=WP_003408106.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876267.1;locus_tag=DKM08_RS07485;product=50S ribosomal protein L35;protein_id=WP_003408106.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1509309 1509698 . + . ID=gene-DKM08_RS07490;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=DKM08_RS07490;old_locus_tag=DKM08_07480 NZ_QFYX01000001.1 Protein Homology CDS 1509309 1509698 . + 0 ID=cds-WP_003408108.1;Parent=gene-DKM08_RS07490;Dbxref=GenBank:WP_003408108.1;Name=WP_003408108.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216159.1;locus_tag=DKM08_RS07490;product=50S ribosomal protein L20;protein_id=WP_003408108.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1509731 1510513 . + . ID=gene-DKM08_RS07495;Name=tsnR;gbkey=Gene;gene=tsnR;gene_biotype=protein_coding;locus_tag=DKM08_RS07495;old_locus_tag=DKM08_07485 NZ_QFYX01000001.1 Protein Homology CDS 1509731 1510513 . + 0 ID=cds-WP_003408112.1;Parent=gene-DKM08_RS07495;Dbxref=GenBank:WP_003408112.1;Name=WP_003408112.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;gene=tsnR;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216160.1;locus_tag=DKM08_RS07495;product=TrmH family RNA methyltransferase;protein_id=WP_003408112.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1510524 1511579 . - . ID=gene-DKM08_RS07500;Name=DKM08_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07500;old_locus_tag=DKM08_07490 NZ_QFYX01000001.1 Protein Homology CDS 1510524 1511579 . - 0 ID=cds-WP_003408141.1;Parent=gene-DKM08_RS07500;Dbxref=GenBank:WP_003408141.1;Name=WP_003408141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216161.1;locus_tag=DKM08_RS07500;product=oxygenase MpaB family protein;protein_id=WP_003408141.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1511889 1512821 . + . ID=gene-DKM08_RS07505;Name=DKM08_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07505;old_locus_tag=DKM08_07495 NZ_QFYX01000001.1 Protein Homology CDS 1511889 1512821 . + 0 ID=cds-WP_003900384.1;Parent=gene-DKM08_RS07505;Dbxref=GenBank:WP_003900384.1;Name=WP_003900384.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177825.1;locus_tag=DKM08_RS07505;product=PE family protein;protein_id=WP_003900384.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1512935 1513849 . + . ID=gene-DKM08_RS07510;Name=DKM08_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07510;old_locus_tag=DKM08_07500 NZ_QFYX01000001.1 Protein Homology CDS 1512935 1513849 . + 0 ID=cds-WP_003913695.1;Parent=gene-DKM08_RS07510;Dbxref=GenBank:WP_003913695.1;Name=WP_003913695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913695.1;locus_tag=DKM08_RS07510;product=adenylate cyclase;protein_id=WP_003913695.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1513856 1514662 . + . ID=gene-DKM08_RS07515;Name=DKM08_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07515;old_locus_tag=DKM08_07505 NZ_QFYX01000001.1 Protein Homology CDS 1513856 1514662 . + 0 ID=cds-WP_003408145.1;Parent=gene-DKM08_RS07515;Dbxref=GenBank:WP_003408145.1;Name=WP_003408145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216164.1;locus_tag=DKM08_RS07515;product=rhomboid-like protein;protein_id=WP_003408145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1514858 1515883 . + . ID=gene-DKM08_RS07520;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=DKM08_RS07520;old_locus_tag=DKM08_07510 NZ_QFYX01000001.1 Protein Homology CDS 1514858 1515883 . + 0 ID=cds-WP_003901219.1;Parent=gene-DKM08_RS07520;Dbxref=GenBank:WP_003901219.1;Name=WP_003901219.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920416.1;locus_tag=DKM08_RS07520;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_003901219.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1515883 1518378 . + . ID=gene-DKM08_RS07525;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=DKM08_RS07525;old_locus_tag=DKM08_07515 NZ_QFYX01000001.1 Protein Homology CDS 1515883 1518378 . + 0 ID=cds-WP_003408148.1;Parent=gene-DKM08_RS07525;Dbxref=GenBank:WP_003408148.1;Name=WP_003408148.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216166.1;locus_tag=DKM08_RS07525;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_003408148.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1518472 1521528 . - . ID=gene-DKM08_RS07530;Name=DKM08_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07530;old_locus_tag=DKM08_07520 NZ_QFYX01000001.1 Protein Homology CDS 1518472 1521528 . - 0 ID=cds-WP_031355549.1;Parent=gene-DKM08_RS07530;Dbxref=GenBank:WP_031355549.1;Name=WP_031355549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177826.1;locus_tag=DKM08_RS07530;product=PE domain-containing protein;protein_id=WP_031355549.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1521722 1522780 . + . ID=gene-DKM08_RS07535;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=DKM08_RS07535;old_locus_tag=DKM08_07525 NZ_QFYX01000001.1 Protein Homology CDS 1521722 1522780 . + 0 ID=cds-WP_003898960.1;Parent=gene-DKM08_RS07535;Dbxref=GenBank:WP_003898960.1;Name=WP_003898960.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216168.1;locus_tag=DKM08_RS07535;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_003898960.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1522777 1523991 . + . ID=gene-DKM08_RS07540;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=DKM08_RS07540;old_locus_tag=DKM08_07530 NZ_QFYX01000001.1 Protein Homology CDS 1522777 1523991 . + 0 ID=cds-WP_003408160.1;Parent=gene-DKM08_RS07540;Dbxref=GenBank:WP_003408160.1;Name=WP_003408160.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216169.1;locus_tag=DKM08_RS07540;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_003408160.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1523988 1524872 . + . ID=gene-DKM08_RS07545;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=DKM08_RS07545;old_locus_tag=DKM08_07535 NZ_QFYX01000001.1 Protein Homology CDS 1523988 1524872 . + 0 ID=cds-WP_003408161.1;Parent=gene-DKM08_RS07545;Dbxref=GenBank:WP_003408161.1;Name=WP_003408161.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216170.1;locus_tag=DKM08_RS07545;product=acetylglutamate kinase;protein_id=WP_003408161.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1524869 1526071 . + . ID=gene-DKM08_RS07550;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=DKM08_RS07550;old_locus_tag=DKM08_07540 NZ_QFYX01000001.1 Protein Homology CDS 1524869 1526071 . + 0 ID=cds-WP_003408163.1;Parent=gene-DKM08_RS07550;Dbxref=GenBank:WP_003408163.1;Name=WP_003408163.1;Ontology_term=GO:0006525,GO:0008483,GO:0030170;gbkey=CDS;gene=argD;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216171.1;locus_tag=DKM08_RS07550;product=acetylornithine transaminase;protein_id=WP_003408163.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1526068 1526991 . + . ID=gene-DKM08_RS07555;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=DKM08_RS07555;old_locus_tag=DKM08_07545 NZ_QFYX01000001.1 Protein Homology CDS 1526068 1526991 . + 0 ID=cds-WP_003408165.1;Parent=gene-DKM08_RS07555;Dbxref=GenBank:WP_003408165.1;Name=WP_003408165.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216172.1;locus_tag=DKM08_RS07555;product=ornithine carbamoyltransferase;protein_id=WP_003408165.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1526988 1527500 . + . ID=gene-DKM08_RS07560;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=DKM08_RS07560;old_locus_tag=DKM08_07550 NZ_QFYX01000001.1 Protein Homology CDS 1526988 1527500 . + 0 ID=cds-WP_003408178.1;Parent=gene-DKM08_RS07560;Dbxref=GenBank:WP_003408178.1;Name=WP_003408178.1;Ontology_term=GO:0006355,GO:0006525,GO:0003700;gbkey=CDS;gene=argR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216173.1;locus_tag=DKM08_RS07560;product=arginine repressor;protein_id=WP_003408178.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1527509 1528705 . + . ID=gene-DKM08_RS07565;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=DKM08_RS07565;old_locus_tag=DKM08_07555 NZ_QFYX01000001.1 Protein Homology CDS 1527509 1528705 . + 0 ID=cds-WP_003408179.1;Parent=gene-DKM08_RS07565;Dbxref=GenBank:WP_003408179.1;Name=WP_003408179.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216174.1;locus_tag=DKM08_RS07565;product=argininosuccinate synthase;protein_id=WP_003408179.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1528785 1530197 . + . ID=gene-DKM08_RS07570;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=DKM08_RS07570;old_locus_tag=DKM08_07560 NZ_QFYX01000001.1 Protein Homology CDS 1528785 1530197 . + 0 ID=cds-WP_003408180.1;Parent=gene-DKM08_RS07570;Dbxref=GenBank:WP_003408180.1;Name=WP_003408180.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216175.1;locus_tag=DKM08_RS07570;product=argininosuccinate lyase;protein_id=WP_003408180.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1530306 1531367 . + . ID=gene-DKM08_RS07575;Name=DKM08_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07575;old_locus_tag=DKM08_07565 NZ_QFYX01000001.1 Protein Homology CDS 1530306 1531367 . + 0 ID=cds-WP_003408181.1;Parent=gene-DKM08_RS07575;Dbxref=GenBank:WP_003408181.1;Name=WP_003408181.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216176.1;locus_tag=DKM08_RS07575;product=type III polyketide synthase;protein_id=WP_003408181.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1531450 1537830 . + . ID=gene-DKM08_RS07580;Name=DKM08_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07580;old_locus_tag=DKM08_07570 NZ_QFYX01000001.1 Protein Homology CDS 1531450 1537830 . + 0 ID=cds-WP_010950571.1;Parent=gene-DKM08_RS07580;Dbxref=GenBank:WP_010950571.1;Name=WP_010950571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216177.1;locus_tag=DKM08_RS07580;product=type I polyketide synthase;protein_id=WP_010950571.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1537850 1542658 . + . ID=gene-DKM08_RS07585;Name=DKM08_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07585;old_locus_tag=DKM08_07575 NZ_QFYX01000001.1 Protein Homology CDS 1537850 1542658 . + 0 ID=cds-WP_010950572.1;Parent=gene-DKM08_RS07585;Dbxref=GenBank:WP_010950572.1;Name=WP_010950572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216178.1;locus_tag=DKM08_RS07585;product=type I polyketide synthase;protein_id=WP_010950572.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1542634 1544166 . + . ID=gene-DKM08_RS22085;Name=DKM08_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22085;old_locus_tag=DKM08_07580 NZ_QFYX01000001.1 Protein Homology CDS 1542634 1544166 . + 0 ID=cds-WP_003901230.1;Parent=gene-DKM08_RS22085;Dbxref=GenBank:WP_003901230.1;Name=WP_003901230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.6;locus_tag=DKM08_RS22085;product=type I polyketide synthase;protein_id=WP_003901230.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1544172 1547225 . + . ID=gene-DKM08_RS07595;Name=DKM08_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07595;old_locus_tag=DKM08_07585 NZ_QFYX01000001.1 Protein Homology CDS 1544172 1547225 . + 0 ID=cds-WP_003910414.1;Parent=gene-DKM08_RS07595;Dbxref=GenBank:WP_003910414.1;Name=WP_003910414.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216180.1;locus_tag=DKM08_RS07595;product=type I polyketide synthase;protein_id=WP_003910414.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1547372 1548433 . + . ID=gene-DKM08_RS07600;Name=DKM08_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07600;old_locus_tag=DKM08_07590 NZ_QFYX01000001.1 Protein Homology CDS 1547372 1548433 . + 0 ID=cds-WP_003408248.1;Parent=gene-DKM08_RS07600;Dbxref=GenBank:WP_003408248.1;Name=WP_003408248.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216181.1;locus_tag=DKM08_RS07600;product=type III polyketide synthase;protein_id=WP_003408248.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1548416 1549708 . - . ID=gene-DKM08_RS07605;Name=DKM08_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07605;old_locus_tag=DKM08_07595 NZ_QFYX01000001.1 Protein Homology CDS 1548416 1549708 . - 0 ID=cds-WP_003901231.1;Parent=gene-DKM08_RS07605;Dbxref=GenBank:WP_003901231.1;Name=WP_003901231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216182.1;locus_tag=DKM08_RS07605;product=cytochrome P450;protein_id=WP_003901231.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1549723 1551498 . - . ID=gene-DKM08_RS07610;Name=DKM08_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07610;old_locus_tag=DKM08_07600 NZ_QFYX01000001.1 Protein Homology CDS 1549723 1551498 . - 0 ID=cds-WP_003408257.1;Parent=gene-DKM08_RS07610;Dbxref=GenBank:WP_003408257.1;Name=WP_003408257.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303143.1;locus_tag=DKM08_RS07610;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_003408257.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1551881 1552243 . + . ID=gene-DKM08_RS07615;Name=DKM08_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07615;old_locus_tag=DKM08_07605 NZ_QFYX01000001.1 Protein Homology CDS 1551881 1552243 . + 0 ID=cds-WP_003901232.1;Parent=gene-DKM08_RS07615;Dbxref=GenBank:WP_003901232.1;Name=WP_003901232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216185.1;locus_tag=DKM08_RS07615;product=hypothetical protein;protein_id=WP_003901232.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1552276 1552623 . + . ID=gene-DKM08_RS07620;Name=DKM08_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07620;old_locus_tag=DKM08_07610 NZ_QFYX01000001.1 Protein Homology CDS 1552276 1552623 . + 0 ID=cds-WP_003408261.1;Parent=gene-DKM08_RS07620;Dbxref=GenBank:WP_003408261.1;Name=WP_003408261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216186.1;locus_tag=DKM08_RS07620;product=DUF427 domain-containing protein;protein_id=WP_003408261.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1552631 1553023 . + . ID=gene-DKM08_RS07625;Name=DKM08_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07625;old_locus_tag=DKM08_07615 NZ_QFYX01000001.1 Protein Homology CDS 1552631 1553023 . + 0 ID=cds-WP_003408263.1;Parent=gene-DKM08_RS07625;Dbxref=GenBank:WP_003408263.1;Name=WP_003408263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216187.1;locus_tag=DKM08_RS07625;product=hypothetical protein;protein_id=WP_003408263.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1553032 1554363 . - . ID=gene-DKM08_RS07630;Name=DKM08_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07630;old_locus_tag=DKM08_07620 NZ_QFYX01000001.1 Protein Homology CDS 1553032 1554363 . - 0 ID=cds-WP_003408264.1;Parent=gene-DKM08_RS07630;Dbxref=GenBank:WP_003408264.1;Name=WP_003408264.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216188.1;locus_tag=DKM08_RS07630;product=MFS transporter;protein_id=WP_003408264.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1554456 1555388 . - . ID=gene-DKM08_RS07635;Name=DKM08_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07635;old_locus_tag=DKM08_07625 NZ_QFYX01000001.1 Protein Homology CDS 1554456 1555388 . - 0 ID=cds-WP_003408265.1;Parent=gene-DKM08_RS07635;Dbxref=GenBank:WP_003408265.1;Name=WP_003408265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216189.1;locus_tag=DKM08_RS07635;product=transglutaminase-like domain-containing protein;protein_id=WP_003408265.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1555416 1556072 . - . ID=gene-DKM08_RS07640;Name=DKM08_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07640;old_locus_tag=DKM08_07630 NZ_QFYX01000001.1 Protein Homology CDS 1555416 1556072 . - 0 ID=cds-WP_003408266.1;Parent=gene-DKM08_RS07640;Dbxref=GenBank:WP_003408266.1;Name=WP_003408266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216190.1;locus_tag=DKM08_RS07640;product=ArsR/SmtB family transcription factor;protein_id=WP_003408266.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1556257 1556403 . + . ID=gene-DKM08_RS21570;Name=DKM08_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21570 NZ_QFYX01000001.1 Protein Homology CDS 1556257 1556403 . + 0 ID=cds-WP_003408267.1;Parent=gene-DKM08_RS21570;Dbxref=GenBank:WP_003408267.1;Name=WP_003408267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303146.1;locus_tag=DKM08_RS21570;product=hypothetical protein;protein_id=WP_003408267.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1556397 1557131 . - . ID=gene-DKM08_RS07645;Name=cmr;gbkey=Gene;gene=cmr;gene_biotype=protein_coding;locus_tag=DKM08_RS07645;old_locus_tag=DKM08_07635 NZ_QFYX01000001.1 Protein Homology CDS 1556397 1557131 . - 0 ID=cds-WP_003408268.1;Parent=gene-DKM08_RS07645;Dbxref=GenBank:WP_003408268.1;Name=WP_003408268.1;gbkey=CDS;gene=cmr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216191.1;locus_tag=DKM08_RS07645;product=HTH-type transcriptional regulator Cmr;protein_id=WP_003408268.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1557203 1557907 . + . ID=gene-DKM08_RS07650;Name=DKM08_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07650;old_locus_tag=DKM08_07640 NZ_QFYX01000001.1 Protein Homology CDS 1557203 1557907 . + 0 ID=cds-WP_003408270.1;Parent=gene-DKM08_RS07650;Dbxref=GenBank:WP_003408270.1;Name=WP_003408270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216192.1;locus_tag=DKM08_RS07650;product=peroxiredoxin-like family protein;protein_id=WP_003408270.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1557904 1558452 . + . ID=gene-DKM08_RS07655;Name=dsbF;gbkey=Gene;gene=dsbF;gene_biotype=protein_coding;locus_tag=DKM08_RS07655;old_locus_tag=DKM08_07645 NZ_QFYX01000001.1 Protein Homology CDS 1557904 1558452 . + 0 ID=cds-WP_003408271.1;Parent=gene-DKM08_RS07655;Dbxref=GenBank:WP_003408271.1;Name=WP_003408271.1;gbkey=CDS;gene=dsbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216193.1;locus_tag=DKM08_RS07655;product=protein disulfide oxidoreductase;protein_id=WP_003408271.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1558553 1559455 . + . ID=gene-DKM08_RS07660;Name=DKM08_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07660;old_locus_tag=DKM08_07650 NZ_QFYX01000001.1 Protein Homology CDS 1558553 1559455 . + 0 ID=cds-WP_003408272.1;Parent=gene-DKM08_RS07660;Dbxref=GenBank:WP_003408272.1;Name=WP_003408272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216194.1;locus_tag=DKM08_RS07660;product=Rv1678 family membrane protein;protein_id=WP_003408272.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1559455 1560576 . + . ID=gene-DKM08_RS07665;Name=fadE16;gbkey=Gene;gene=fadE16;gene_biotype=protein_coding;locus_tag=DKM08_RS07665;old_locus_tag=DKM08_07655 NZ_QFYX01000001.1 Protein Homology CDS 1559455 1560576 . + 0 ID=cds-WP_003408274.1;Parent=gene-DKM08_RS07665;Dbxref=GenBank:WP_003408274.1;Name=WP_003408274.1;gbkey=CDS;gene=fadE16;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216195.1;locus_tag=DKM08_RS07665;product=Rv1679 family acyl-CoA dehydrogenase;protein_id=WP_003408274.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1560585 1561409 . + . ID=gene-DKM08_RS07670;Name=DKM08_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07670;old_locus_tag=DKM08_07660 NZ_QFYX01000001.1 Protein Homology CDS 1560585 1561409 . + 0 ID=cds-WP_003898971.1;Parent=gene-DKM08_RS07670;Dbxref=GenBank:WP_003898971.1;Name=WP_003898971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216196.1;locus_tag=DKM08_RS07670;product=Rv1680 family SBP-like protein;protein_id=WP_003898971.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1561406 1562398 . + . ID=gene-DKM08_RS07675;Name=moeX;gbkey=Gene;gene=moeX;gene_biotype=protein_coding;locus_tag=DKM08_RS07675;old_locus_tag=DKM08_07665 NZ_QFYX01000001.1 Protein Homology CDS 1561406 1562398 . + 0 ID=cds-WP_003408279.1;Parent=gene-DKM08_RS07675;Dbxref=GenBank:WP_003408279.1;Name=WP_003408279.1;gbkey=CDS;gene=moeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216197.1;locus_tag=DKM08_RS07675;product=Rv1681 family radical SAM protein;protein_id=WP_003408279.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1562628 1563476 . + . ID=gene-DKM08_RS07680;Name=DKM08_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07680;old_locus_tag=DKM08_07670 NZ_QFYX01000001.1 Protein Homology CDS 1562628 1563476 . + 0 ID=cds-WP_003898973.1;Parent=gene-DKM08_RS07680;Dbxref=GenBank:WP_003898973.1;Name=WP_003898973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898973.1;locus_tag=DKM08_RS07680;product=DivIVA domain-containing protein;protein_id=WP_003898973.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1563694 1566693 . + . ID=gene-DKM08_RS07685;Name=DKM08_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07685;old_locus_tag=DKM08_07675 NZ_QFYX01000001.1 Protein Homology CDS 1563694 1566693 . + 0 ID=cds-WP_003408360.1;Parent=gene-DKM08_RS07685;Dbxref=GenBank:WP_003408360.1;Name=WP_003408360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216199.1;locus_tag=DKM08_RS07685;product=acyl-CoA synthetase;protein_id=WP_003408360.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1566686 1566910 . + . ID=gene-DKM08_RS07690;Name=DKM08_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07690;old_locus_tag=DKM08_07680 NZ_QFYX01000001.1 Protein Homology CDS 1566686 1566910 . + 0 ID=cds-WP_003408362.1;Parent=gene-DKM08_RS07690;Dbxref=GenBank:WP_003408362.1;Name=WP_003408362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216200.1;locus_tag=DKM08_RS07690;product=Trm112 family protein;protein_id=WP_003408362.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1566876 1567499 . - . ID=gene-DKM08_RS07695;Name=DKM08_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07695;old_locus_tag=DKM08_07685 NZ_QFYX01000001.1 Protein Homology CDS 1566876 1567499 . - 0 ID=cds-WP_003408366.1;Parent=gene-DKM08_RS07695;Dbxref=GenBank:WP_003408366.1;Name=WP_003408366.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216201.1;locus_tag=DKM08_RS07695;product=TetR family transcriptional regulator;protein_id=WP_003408366.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1567501 1568250 . - . ID=gene-DKM08_RS07700;Name=DKM08_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07700;old_locus_tag=DKM08_07690 NZ_QFYX01000001.1 Protein Homology CDS 1567501 1568250 . - 0 ID=cds-WP_181005459.1;Parent=gene-DKM08_RS07700;Dbxref=GenBank:WP_181005459.1;Name=WP_181005459.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912666.1;locus_tag=DKM08_RS07700;product=ABC transporter permease;protein_id=WP_181005459.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1568253 1569020 . - . ID=gene-DKM08_RS07705;Name=DKM08_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07705;old_locus_tag=DKM08_07695 NZ_QFYX01000001.1 Protein Homology CDS 1568253 1569020 . - 0 ID=cds-WP_003898975.1;Parent=gene-DKM08_RS07705;Dbxref=GenBank:WP_003898975.1;Name=WP_003898975.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216203.1;locus_tag=DKM08_RS07705;product=ABC transporter ATP-binding protein;protein_id=WP_003898975.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1569079 1569690 . + . ID=gene-DKM08_RS07710;Name=mpg;gbkey=Gene;gene=mpg;gene_biotype=protein_coding;locus_tag=DKM08_RS07710;old_locus_tag=DKM08_07700 NZ_QFYX01000001.1 Protein Homology CDS 1569079 1569690 . + 0 ID=cds-WP_003408373.1;Parent=gene-DKM08_RS07710;Dbxref=GenBank:WP_003408373.1;Name=WP_003408373.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;gene=mpg;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216204.1;locus_tag=DKM08_RS07710;product=DNA-3-methyladenine glycosylase;protein_id=WP_003408373.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1569702 1570976 . + . ID=gene-DKM08_RS07715;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=DKM08_RS07715;old_locus_tag=DKM08_07705 NZ_QFYX01000001.1 Protein Homology CDS 1569702 1570976 . + 0 ID=cds-WP_003408375.1;Parent=gene-DKM08_RS07715;Dbxref=GenBank:WP_003408375.1;Name=WP_003408375.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216205.1;locus_tag=DKM08_RS07715;product=tyrosine--tRNA ligase;protein_id=WP_003408375.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1571593 1572012 . + . ID=gene-DKM08_RS07720;Name=DKM08_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07720;old_locus_tag=DKM08_07710 NZ_QFYX01000001.1 Protein Homology CDS 1571593 1572012 . + 0 ID=cds-WP_010950574.1;Parent=gene-DKM08_RS07720;Dbxref=GenBank:WP_010950574.1;Name=WP_010950574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011739788.1;locus_tag=DKM08_RS07720;product=DUF732 domain-containing protein;protein_id=WP_010950574.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1572051 1572803 . + . ID=gene-DKM08_RS07725;Name=DKM08_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07725;old_locus_tag=DKM08_07715 NZ_QFYX01000001.1 Protein Homology CDS 1572051 1572803 . + 0 ID=cds-WP_003408379.1;Parent=gene-DKM08_RS07725;Dbxref=GenBank:WP_003408379.1;Name=WP_003408379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216207.1;locus_tag=DKM08_RS07725;product=hypothetical protein;protein_id=WP_003408379.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1572800 1573861 . + . ID=gene-DKM08_RS07730;Name=DKM08_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07730;old_locus_tag=DKM08_07720 NZ_QFYX01000001.1 Protein Homology CDS 1572800 1573861 . + 0 ID=cds-WP_003408380.1;Parent=gene-DKM08_RS07730;Dbxref=GenBank:WP_003408380.1;Name=WP_003408380.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216208.1;locus_tag=DKM08_RS07730;product=HAD-IIA family hydrolase;protein_id=WP_003408380.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1573858 1574034 . + . ID=gene-DKM08_RS07735;Name=DKM08_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07735;old_locus_tag=DKM08_07725 NZ_QFYX01000001.1 Protein Homology CDS 1573858 1574034 . + 0 ID=cds-WP_003408381.1;Parent=gene-DKM08_RS07735;Dbxref=GenBank:WP_003408381.1;Name=WP_003408381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216209.1;locus_tag=DKM08_RS07735;product=hypothetical protein;protein_id=WP_003408381.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1574042 1574848 . + . ID=gene-DKM08_RS07740;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=DKM08_RS07740;old_locus_tag=DKM08_07730 NZ_QFYX01000001.1 Protein Homology CDS 1574042 1574848 . + 0 ID=cds-WP_003408382.1;Parent=gene-DKM08_RS07740;Dbxref=GenBank:WP_003408382.1;Name=WP_003408382.1;gbkey=CDS;gene=tlyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216210.1;locus_tag=DKM08_RS07740;product=16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=WP_003408382.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1574848 1575771 . + . ID=gene-DKM08_RS07745;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=DKM08_RS07745;old_locus_tag=DKM08_07735 NZ_QFYX01000001.1 Protein Homology CDS 1574848 1575771 . + 0 ID=cds-WP_003408383.1;Parent=gene-DKM08_RS07745;Dbxref=GenBank:WP_003408383.1;Name=WP_003408383.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;gene=ppnK;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA,NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216211.1;locus_tag=DKM08_RS07745;product=NAD kinase;protein_id=WP_003408383.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1575785 1577548 . + . ID=gene-DKM08_RS07750;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=DKM08_RS07750;old_locus_tag=DKM08_07740 NZ_QFYX01000001.1 Protein Homology CDS 1575785 1577548 . + 0 ID=cds-WP_003408385.1;Parent=gene-DKM08_RS07750;Dbxref=GenBank:WP_003408385.1;Name=WP_003408385.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216212.1;locus_tag=DKM08_RS07750;product=DNA repair protein RecN;protein_id=WP_003408385.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1577644 1578825 . + . ID=gene-DKM08_RS07755;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=DKM08_RS07755;old_locus_tag=DKM08_07745 NZ_QFYX01000001.1 Protein Homology CDS 1577644 1578825 . + 0 ID=cds-WP_003408387.1;Parent=gene-DKM08_RS07755;Dbxref=GenBank:WP_003408387.1;Name=WP_003408387.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216213.1;locus_tag=DKM08_RS07755;product=putative cytokinetic ring protein SteA;protein_id=WP_003408387.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1578847 1579791 . + . ID=gene-DKM08_RS07760;Name=mctB;gbkey=Gene;gene=mctB;gene_biotype=protein_coding;locus_tag=DKM08_RS07760;old_locus_tag=DKM08_07750 NZ_QFYX01000001.1 Protein Homology CDS 1578847 1579791 . + 0 ID=cds-WP_003408390.1;Parent=gene-DKM08_RS07760;Dbxref=GenBank:WP_003408390.1;Name=WP_003408390.1;gbkey=CDS;gene=mctB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216214.1;locus_tag=DKM08_RS07760;product=copper transporter MctB;protein_id=WP_003408390.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1579931 1581691 . + . ID=gene-DKM08_RS07765;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=DKM08_RS07765;old_locus_tag=DKM08_07755 NZ_QFYX01000001.1 Protein Homology CDS 1579931 1581691 . + 0 ID=cds-WP_147020898.1;Parent=gene-DKM08_RS07765;Dbxref=GenBank:WP_147020898.1;Name=WP_147020898.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216215.1;locus_tag=DKM08_RS07765;product=CTP synthase;protein_id=WP_147020898.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1581684 1582307 . + . ID=gene-DKM08_RS07770;Name=DKM08_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07770;old_locus_tag=DKM08_07760 NZ_QFYX01000001.1 Protein Homology CDS 1581684 1582307 . + 0 ID=cds-WP_003408399.1;Parent=gene-DKM08_RS07770;Dbxref=GenBank:WP_003408399.1;Name=WP_003408399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216216.1;locus_tag=DKM08_RS07770;product=ADP-ribose diphosphatase;protein_id=WP_003408399.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1582304 1583239 . + . ID=gene-DKM08_RS07775;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=DKM08_RS07775;old_locus_tag=DKM08_07765 NZ_QFYX01000001.1 Protein Homology CDS 1582304 1583239 . + 0 ID=cds-WP_003408401.1;Parent=gene-DKM08_RS07775;Dbxref=GenBank:WP_003408401.1;Name=WP_003408401.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216217.1;locus_tag=DKM08_RS07775;product=site-specific tyrosine recombinase XerD;protein_id=WP_003408401.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1583313 1584677 . - . ID=gene-DKM08_RS07780;Name=DKM08_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07780;old_locus_tag=DKM08_07770 NZ_QFYX01000001.1 Protein Homology CDS 1583313 1584677 . - 0 ID=cds-WP_003898977.1;Parent=gene-DKM08_RS07780;Dbxref=GenBank:WP_003898977.1;Name=WP_003898977.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216218.1;locus_tag=DKM08_RS07780;product=HNH endonuclease signature motif containing protein;protein_id=WP_003898977.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1584938 1585099 . - . ID=gene-DKM08_RS21575;Name=DKM08_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21575 NZ_QFYX01000001.1 Protein Homology CDS 1584938 1585099 . - 0 ID=cds-WP_009939761.1;Parent=gene-DKM08_RS21575;Dbxref=GenBank:WP_009939761.1;Name=WP_009939761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939761.1;locus_tag=DKM08_RS21575;product=hypothetical protein;protein_id=WP_009939761.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1585232 1585981 . - . ID=gene-DKM08_RS07785;Name=DKM08_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07785;old_locus_tag=DKM08_07775 NZ_QFYX01000001.1 Protein Homology CDS 1585232 1585981 . - 0 ID=cds-WP_014848103.1;Parent=gene-DKM08_RS07785;Dbxref=GenBank:WP_014848103.1;Name=WP_014848103.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216219.4;locus_tag=DKM08_RS07785;product=O-methyltransferase;protein_id=WP_014848103.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1585887 1587557 . - . ID=gene-DKM08_RS07790;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;locus_tag=DKM08_RS07790;old_locus_tag=DKM08_07780 NZ_QFYX01000001.1 Protein Homology CDS 1585887 1587557 . - 0 ID=cds-WP_003408413.1;Parent=gene-DKM08_RS07790;Dbxref=GenBank:WP_003408413.1;Name=WP_003408413.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216220.1;locus_tag=DKM08_RS07790;product=amino acid permease;protein_id=WP_003408413.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1587598 1588755 . - . ID=gene-DKM08_RS07795;Name=DKM08_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07795;old_locus_tag=DKM08_07785 NZ_QFYX01000001.1 Protein Homology CDS 1587598 1588755 . - 0 ID=cds-WP_003408416.1;Parent=gene-DKM08_RS07795;Dbxref=GenBank:WP_003408416.1;Name=WP_003408416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177827.1;locus_tag=DKM08_RS07795;product=PPE family protein;protein_id=WP_003408416.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1588795 1589829 . - . ID=gene-DKM08_RS07800;Name=DKM08_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07800;old_locus_tag=DKM08_07790 NZ_QFYX01000001.1 Protein Homology CDS 1588795 1589829 . - 0 ID=cds-WP_003918302.1;Parent=gene-DKM08_RS07800;Dbxref=GenBank:WP_003918302.1;Name=WP_003918302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=DKM08_RS07800;product=PPE family protein;protein_id=WP_003918302.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1590583 1590750 . - . ID=gene-DKM08_RS07805;Name=DKM08_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07805;old_locus_tag=DKM08_07795 NZ_QFYX01000001.1 Protein Homology CDS 1590583 1590750 . - 0 ID=cds-WP_003408420.1;Parent=gene-DKM08_RS07805;Dbxref=GenBank:WP_003408420.1;Name=WP_003408420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177651.1;locus_tag=DKM08_RS07805;product=hypothetical protein;protein_id=WP_003408420.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1590983 1592443 . + . ID=gene-DKM08_RS07810;Name=DKM08_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07810;old_locus_tag=DKM08_07800 NZ_QFYX01000001.1 Protein Homology CDS 1590983 1592443 . + 0 ID=cds-WP_010950576.1;Parent=gene-DKM08_RS07810;Dbxref=GenBank:WP_010950576.1;Name=WP_010950576.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216223.1;locus_tag=DKM08_RS07810;product=SulP family inorganic anion transporter;protein_id=WP_010950576.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1592554 1593417 . + . ID=gene-DKM08_RS07815;Name=DKM08_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07815;old_locus_tag=DKM08_07805 NZ_QFYX01000001.1 Protein Homology CDS 1592554 1593417 . + 0 ID=cds-WP_031652244.1;Parent=gene-DKM08_RS07815;Dbxref=GenBank:WP_031652244.1;Name=WP_031652244.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911586.1;locus_tag=DKM08_RS07815;product=ParA family protein;protein_id=WP_031652244.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1593414 1594250 . + . ID=gene-DKM08_RS07820;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=DKM08_RS07820;old_locus_tag=DKM08_07810 NZ_QFYX01000001.1 Protein Homology CDS 1593414 1594250 . + 0 ID=cds-WP_003408432.1;Parent=gene-DKM08_RS07820;Dbxref=GenBank:WP_003408432.1;Name=WP_003408432.1;gbkey=CDS;gene=scpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216225.1;locus_tag=DKM08_RS07820;product=segregation/condensation protein A;protein_id=WP_003408432.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1594247 1594942 . + . ID=gene-DKM08_RS07825;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=DKM08_RS07825;old_locus_tag=DKM08_07815 NZ_QFYX01000001.1 Protein Homology CDS 1594247 1594942 . + 0 ID=cds-WP_003408436.1;Parent=gene-DKM08_RS07825;Dbxref=GenBank:WP_003408436.1;Name=WP_003408436.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216226.1;locus_tag=DKM08_RS07825;product=SMC-Scp complex subunit ScpB;protein_id=WP_003408436.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1594939 1595703 . + . ID=gene-DKM08_RS07830;Name=DKM08_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07830;old_locus_tag=DKM08_07820 NZ_QFYX01000001.1 Protein Homology CDS 1594939 1595703 . + 0 ID=cds-WP_003408439.1;Parent=gene-DKM08_RS07830;Dbxref=GenBank:WP_003408439.1;Name=WP_003408439.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216227.1;locus_tag=DKM08_RS07830;product=pseudouridine synthase;protein_id=WP_003408439.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1595700 1596392 . + . ID=gene-DKM08_RS07835;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=DKM08_RS07835;old_locus_tag=DKM08_07825 NZ_QFYX01000001.1 Protein Homology CDS 1595700 1596392 . + 0 ID=cds-WP_003408441.1;Parent=gene-DKM08_RS07835;Dbxref=GenBank:WP_003408441.1;Name=WP_003408441.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216228.1;locus_tag=DKM08_RS07835;product=(d)CMP kinase;protein_id=WP_003408441.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1596389 1597780 . + . ID=gene-DKM08_RS07840;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=DKM08_RS07840;old_locus_tag=DKM08_07830 NZ_QFYX01000001.1 Protein Homology CDS 1596389 1597780 . + 0 ID=cds-WP_003898984.1;Parent=gene-DKM08_RS07840;Dbxref=GenBank:WP_003898984.1;Name=WP_003898984.1;Ontology_term=GO:0005525;gbkey=CDS;gene=der;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216229.1;locus_tag=DKM08_RS07840;product=ribosome biogenesis GTPase Der;protein_id=WP_003898984.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1597954 1598766 . + . ID=gene-DKM08_RS07845;Name=DKM08_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07845;old_locus_tag=DKM08_07835 NZ_QFYX01000001.1 Protein Homology CDS 1597954 1598766 . + 0 ID=cds-WP_003408444.1;Parent=gene-DKM08_RS07845;Dbxref=GenBank:WP_003408444.1;Name=WP_003408444.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216230.1;locus_tag=DKM08_RS07845;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003408444.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1598760 1599674 . + . ID=gene-DKM08_RS07850;Name=DKM08_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07850;old_locus_tag=DKM08_07840 NZ_QFYX01000001.1 Protein Homology CDS 1598760 1599674 . + 0 ID=cds-WP_003898985.1;Parent=gene-DKM08_RS07850;Dbxref=GenBank:WP_003898985.1;Name=WP_003898985.1;Ontology_term=GO:0006635,GO:0003857,GO:0070403;gbkey=CDS;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177829.1;locus_tag=DKM08_RS07850;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_003898985.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1599677 1600507 . + . ID=gene-DKM08_RS07855;Name=DKM08_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07855;old_locus_tag=DKM08_07845 NZ_QFYX01000001.1 Protein Homology CDS 1599677 1600507 . + 0 ID=cds-WP_003408448.1;Parent=gene-DKM08_RS07855;Dbxref=GenBank:WP_003408448.1;Name=WP_003408448.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907750.1;locus_tag=DKM08_RS07855;product=cyclase family protein;protein_id=WP_003408448.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1600507 1600857 . + . ID=gene-DKM08_RS07860;Name=DKM08_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07860;old_locus_tag=DKM08_07850 NZ_QFYX01000001.1 Protein Homology CDS 1600507 1600857 . + 0 ID=cds-WP_003898986.1;Parent=gene-DKM08_RS07860;Dbxref=GenBank:WP_003898986.1;Name=WP_003898986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216233.1;locus_tag=DKM08_RS07860;product=cupin domain-containing protein;protein_id=WP_003898986.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1600910 1601727 . + . ID=gene-DKM08_RS07865;Name=DKM08_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS07865;old_locus_tag=DKM08_07855;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1600910 1601727 . + 0 ID=cds-DKM08_RS07865;Parent=gene-DKM08_RS07865;Note=frameshifted;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine catabolic process to acetate|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216234.1;locus_tag=DKM08_RS07865;product=3-keto-5-aminohexanoate cleavage protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1601741 1602520 . + . ID=gene-DKM08_RS07870;Name=DKM08_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07870;old_locus_tag=DKM08_07860 NZ_QFYX01000001.1 Protein Homology CDS 1601741 1602520 . + 0 ID=cds-WP_003408460.1;Parent=gene-DKM08_RS07870;Dbxref=GenBank:WP_003408460.1;Name=WP_003408460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216235.1;locus_tag=DKM08_RS07870;product=IclR family transcriptional regulator;protein_id=WP_003408460.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1602713 1602786 . + . ID=gene-DKM08_RS07875;Name=DKM08_RS07875;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS07875;old_locus_tag=DKM08_07865 NZ_QFYX01000001.1 tRNAscan-SE tRNA 1602713 1602786 . + . ID=rna-DKM08_RS07875;Parent=gene-DKM08_RS07875;anticodon=(pos:1602747..1602749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS07875;product=tRNA-Pro NZ_QFYX01000001.1 tRNAscan-SE exon 1602713 1602786 . + . ID=exon-DKM08_RS07875-1;Parent=rna-DKM08_RS07875;anticodon=(pos:1602747..1602749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS07875;product=tRNA-Pro NZ_QFYX01000001.1 RefSeq gene 1603130 1603519 . - . ID=gene-DKM08_RS07880;Name=DKM08_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07880;old_locus_tag=DKM08_07870 NZ_QFYX01000001.1 Protein Homology CDS 1603130 1603519 . - 0 ID=cds-WP_003408465.1;Parent=gene-DKM08_RS07880;Dbxref=GenBank:WP_003408465.1;Name=WP_003408465.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216236.1;locus_tag=DKM08_RS07880;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003408465.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1603516 1603743 . - . ID=gene-DKM08_RS07885;Name=DKM08_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07885;old_locus_tag=DKM08_07875 NZ_QFYX01000001.1 Protein Homology CDS 1603516 1603743 . - 0 ID=cds-WP_003408469.1;Parent=gene-DKM08_RS07885;Dbxref=GenBank:WP_003408469.1;Name=WP_003408469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216237.2;locus_tag=DKM08_RS07885;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003408469.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1603961 1605445 . + . ID=gene-DKM08_RS07890;Name=DKM08_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07890;old_locus_tag=DKM08_07880 NZ_QFYX01000001.1 Protein Homology CDS 1603961 1605445 . + 0 ID=cds-WP_010950580.1;Parent=gene-DKM08_RS07890;Dbxref=GenBank:WP_010950580.1;Name=WP_010950580.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216238.1;locus_tag=DKM08_RS07890;product=biotin carboxylase;protein_id=WP_010950580.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1605442 1606689 . + . ID=gene-DKM08_RS07895;Name=DKM08_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07895;old_locus_tag=DKM08_07885 NZ_QFYX01000001.1 Protein Homology CDS 1605442 1606689 . + 0 ID=cds-WP_003408476.1;Parent=gene-DKM08_RS07895;Dbxref=GenBank:WP_003408476.1;Name=WP_003408476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216239.1;locus_tag=DKM08_RS07895;product=serine hydrolase domain-containing protein;protein_id=WP_003408476.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1606732 1607151 . - . ID=gene-DKM08_RS07900;Name=DKM08_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07900;old_locus_tag=DKM08_07890 NZ_QFYX01000001.1 Protein Homology CDS 1606732 1607151 . - 0 ID=cds-WP_003408483.1;Parent=gene-DKM08_RS07900;Dbxref=GenBank:WP_003408483.1;Name=WP_003408483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216240.1;locus_tag=DKM08_RS07900;product=hypothetical protein;protein_id=WP_003408483.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1607141 1607851 . - . ID=gene-DKM08_RS07905;Name=DKM08_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07905;old_locus_tag=DKM08_07895 NZ_QFYX01000001.1 Protein Homology CDS 1607141 1607851 . - 0 ID=cds-WP_003408486.1;Parent=gene-DKM08_RS07905;Dbxref=GenBank:WP_003408486.1;Name=WP_003408486.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216241.1;locus_tag=DKM08_RS07905;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003408486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1607952 1609337 . + . ID=gene-DKM08_RS07910;Name=DKM08_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07910;old_locus_tag=DKM08_07900 NZ_QFYX01000001.1 Protein Homology CDS 1607952 1609337 . + 0 ID=cds-WP_023349522.1;Parent=gene-DKM08_RS07910;Dbxref=GenBank:WP_023349522.1;Name=WP_023349522.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=DKM08_RS07910;product=FAD-binding oxidoreductase;protein_id=WP_023349522.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1609370 1609939 . + . ID=gene-DKM08_RS07915;Name=DKM08_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07915;old_locus_tag=DKM08_07905 NZ_QFYX01000001.1 Protein Homology CDS 1609370 1609939 . + 0 ID=cds-WP_003408493.1;Parent=gene-DKM08_RS07915;Dbxref=GenBank:WP_003408493.1;Name=WP_003408493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216243.1;locus_tag=DKM08_RS07915;product=TIGR03086 family metal-binding protein;protein_id=WP_003408493.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1609964 1610734 . - . ID=gene-DKM08_RS07920;Name=DKM08_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07920;old_locus_tag=DKM08_07910 NZ_QFYX01000001.1 Protein Homology CDS 1609964 1610734 . - 0 ID=cds-WP_147020919.1;Parent=gene-DKM08_RS07920;Dbxref=GenBank:WP_147020919.1;Name=WP_147020919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216244.1;locus_tag=DKM08_RS07920;product=glycoside hydrolase;protein_id=WP_147020919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1610731 1611669 . - . ID=gene-DKM08_RS07925;Name=DKM08_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07925;old_locus_tag=DKM08_07915 NZ_QFYX01000001.1 Protein Homology CDS 1610731 1611669 . - 0 ID=cds-WP_003408497.1;Parent=gene-DKM08_RS07925;Dbxref=GenBank:WP_003408497.1;Name=WP_003408497.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216245.1;locus_tag=DKM08_RS07925;product=class I SAM-dependent methyltransferase;protein_id=WP_003408497.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1611792 1613345 . - . ID=gene-DKM08_RS07930;Name=DKM08_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07930;old_locus_tag=DKM08_07920 NZ_QFYX01000001.1 Protein Homology CDS 1611792 1613345 . - 0 ID=cds-WP_003408499.1;Parent=gene-DKM08_RS07930;Dbxref=GenBank:WP_003408499.1;Name=WP_003408499.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216246.1;locus_tag=DKM08_RS07930;product=serine hydrolase domain-containing protein;protein_id=WP_003408499.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1613495 1613624 . + . ID=gene-DKM08_RS22695;Name=DKM08_RS22695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22695;partial=true;pseudo=true;start_range=.,1613495 NZ_QFYX01000001.1 Protein Homology CDS 1613495 1613624 . + 0 ID=cds-DKM08_RS22695;Parent=gene-DKM08_RS22695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=DKM08_RS22695;partial=true;product=galactofuranosyl transferase;pseudo=true;start_range=.,1613495;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1613777 1615333 . + . ID=gene-DKM08_RS07935;Name=DKM08_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07935;old_locus_tag=DKM08_07925 NZ_QFYX01000001.1 Protein Homology CDS 1613777 1615333 . + 0 ID=cds-WP_003898989.1;Parent=gene-DKM08_RS07935;Dbxref=GenBank:WP_003898989.1;Name=WP_003898989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214748.2;locus_tag=DKM08_RS07935;product=succinic semialdehyde dehydrogenase;protein_id=WP_003898989.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1615343 1615891 . - . ID=gene-DKM08_RS07940;Name=DKM08_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07940;old_locus_tag=DKM08_07930 NZ_QFYX01000001.1 Protein Homology CDS 1615343 1615891 . - 0 ID=cds-WP_003408503.1;Parent=gene-DKM08_RS07940;Dbxref=GenBank:WP_003408503.1;Name=WP_003408503.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216248.1;locus_tag=DKM08_RS07940;product=thioredoxin family protein;protein_id=WP_003408503.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1615955 1616587 . - . ID=gene-DKM08_RS07945;Name=DKM08_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07945;old_locus_tag=DKM08_07935 NZ_QFYX01000001.1 Protein Homology CDS 1615955 1616587 . - 0 ID=cds-WP_003408506.1;Parent=gene-DKM08_RS07945;Dbxref=GenBank:WP_003408506.1;Name=WP_003408506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216249.1;locus_tag=DKM08_RS07945;product=Rv1733c family protein;protein_id=WP_003408506.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1616874 1617116 . - . ID=gene-DKM08_RS07950;Name=DKM08_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07950;old_locus_tag=DKM08_07940 NZ_QFYX01000001.1 Protein Homology CDS 1616874 1617116 . - 0 ID=cds-WP_010950582.1;Parent=gene-DKM08_RS07950;Dbxref=GenBank:WP_010950582.1;Name=WP_010950582.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014000907.1;locus_tag=DKM08_RS07950;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_010950582.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1617391 1617984 . - . ID=gene-DKM08_RS07960;Name=DKM08_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07960;old_locus_tag=DKM08_07950 NZ_QFYX01000001.1 Protein Homology CDS 1617391 1617984 . - 0 ID=cds-WP_003898991.1;Parent=gene-DKM08_RS07960;Dbxref=GenBank:WP_003898991.1;Name=WP_003898991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015552.6;locus_tag=DKM08_RS07960;product=tellurite resistance/C4-dicarboxylate transporter family protein;protein_id=WP_003898991.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1617987 1618229 . - . ID=gene-DKM08_RS07965;Name=DKM08_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07965;old_locus_tag=DKM08_07955 NZ_QFYX01000001.1 Protein Homology CDS 1617987 1618229 . - 0 ID=cds-WP_003408513.1;Parent=gene-DKM08_RS07965;Dbxref=GenBank:WP_003408513.1;Name=WP_003408513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030033.1;locus_tag=DKM08_RS07965;product=hypothetical protein;protein_id=WP_003408513.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1618328 1620286 . - . ID=gene-DKM08_RS07970;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=DKM08_RS07970;old_locus_tag=DKM08_07960 NZ_QFYX01000001.1 Protein Homology CDS 1618328 1620286 . - 0 ID=cds-WP_010950583.1;Parent=gene-DKM08_RS07970;Dbxref=GenBank:WP_010950583.1;Name=WP_010950583.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216252.1;locus_tag=DKM08_RS07970;product=respiratory nitrate reductase subunit gamma;protein_id=WP_010950583.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1620283 1621470 . - . ID=gene-DKM08_RS07975;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=DKM08_RS07975;old_locus_tag=DKM08_07965 NZ_QFYX01000001.1 Protein Homology CDS 1620283 1621470 . - 0 ID=cds-WP_003898992.1;Parent=gene-DKM08_RS07975;Dbxref=GenBank:WP_003898992.1;Name=WP_003898992.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216253.1;locus_tag=DKM08_RS07975;product=nitrate transporter NarK;protein_id=WP_003898992.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1621757 1622041 . + . ID=gene-DKM08_RS07980;Name=DKM08_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07980;old_locus_tag=DKM08_07970 NZ_QFYX01000001.1 Protein Homology CDS 1621757 1622041 . + 0 ID=cds-WP_003408522.1;Parent=gene-DKM08_RS07980;Dbxref=GenBank:WP_003408522.1;Name=WP_003408522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216254.1;locus_tag=DKM08_RS07980;product=DUF1876 domain-containing protein;protein_id=WP_003408522.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1622055 1623737 . - . ID=gene-DKM08_RS07985;Name=DKM08_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07985;old_locus_tag=DKM08_07975 NZ_QFYX01000001.1 Protein Homology CDS 1622055 1623737 . - 0 ID=cds-WP_003898994.1;Parent=gene-DKM08_RS07985;Dbxref=GenBank:WP_003898994.1;Name=WP_003898994.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216255.1;locus_tag=DKM08_RS07985;product=SulP family inorganic anion transporter;protein_id=WP_003898994.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1623805 1624017 . + . ID=gene-DKM08_RS07990;Name=DKM08_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07990;old_locus_tag=DKM08_07980 NZ_QFYX01000001.1 Protein Homology CDS 1623805 1624017 . + 0 ID=cds-WP_003408528.1;Parent=gene-DKM08_RS07990;Dbxref=GenBank:WP_003408528.1;Name=WP_003408528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216256.1;locus_tag=DKM08_RS07990;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003408528.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1624017 1624265 . + . ID=gene-DKM08_RS07995;Name=DKM08_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS07995;old_locus_tag=DKM08_07985 NZ_QFYX01000001.1 Protein Homology CDS 1624017 1624265 . + 0 ID=cds-WP_003408531.1;Parent=gene-DKM08_RS07995;Dbxref=GenBank:WP_003408531.1;Name=WP_003408531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216257.1;locus_tag=DKM08_RS07995;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003408531.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1624273 1625011 . + . ID=gene-DKM08_RS08000;Name=DKM08_RS08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08000;old_locus_tag=DKM08_07990;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1624273 1625011 . + 0 ID=cds-DKM08_RS08000;Parent=gene-DKM08_RS08000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216258.1;locus_tag=DKM08_RS08000;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1625105 1626805 . + . ID=gene-DKM08_RS08005;Name=pknE;gbkey=Gene;gene=pknE;gene_biotype=protein_coding;locus_tag=DKM08_RS08005;old_locus_tag=DKM08_07995 NZ_QFYX01000001.1 Protein Homology CDS 1625105 1626805 . + 0 ID=cds-WP_003898998.1;Parent=gene-DKM08_RS08005;Dbxref=GenBank:WP_003898998.1;Name=WP_003898998.1;gbkey=CDS;gene=pknE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216259.1;locus_tag=DKM08_RS08005;product=serine/threonine protein kinase PknE;protein_id=WP_003898998.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1627090 1627491 . - . ID=gene-DKM08_RS08010;Name=DKM08_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08010;old_locus_tag=DKM08_08000 NZ_QFYX01000001.1 Protein Homology CDS 1627090 1627491 . - 0 ID=cds-WP_010950586.1;Parent=gene-DKM08_RS08010;Dbxref=GenBank:WP_010950586.1;Name=WP_010950586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216260.1;locus_tag=DKM08_RS08010;product=hypothetical protein;protein_id=WP_010950586.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1627481 1628092 . - . ID=gene-DKM08_RS08015;Name=idi;gbkey=Gene;gene=idi;gene_biotype=pseudogene;locus_tag=DKM08_RS08015;old_locus_tag=DKM08_08005;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1627481 1628092 . - 0 ID=cds-DKM08_RS08015;Parent=gene-DKM08_RS08015;Note=internal stop;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216261.1;locus_tag=DKM08_RS08015;product=isopentenyl-diphosphate Delta-isomerase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1628239 1629669 . + . ID=gene-DKM08_RS08020;Name=pknF;gbkey=Gene;gene=pknF;gene_biotype=protein_coding;locus_tag=DKM08_RS08020;old_locus_tag=DKM08_08010 NZ_QFYX01000001.1 Protein Homology CDS 1628239 1629669 . + 0 ID=cds-WP_010950588.1;Parent=gene-DKM08_RS08020;Dbxref=GenBank:WP_010950588.1;Name=WP_010950588.1;gbkey=CDS;gene=pknF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216262.1;locus_tag=DKM08_RS08020;product=serine/threonine protein kinase PknF;protein_id=WP_010950588.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1629731 1632328 . + . ID=gene-DKM08_RS08025;Name=DKM08_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08025;old_locus_tag=DKM08_08015 NZ_QFYX01000001.1 Protein Homology CDS 1629731 1632328 . + 0 ID=cds-WP_003408545.1;Parent=gene-DKM08_RS08025;Dbxref=GenBank:WP_003408545.1;Name=WP_003408545.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216263.1;locus_tag=DKM08_RS08025;product=ATP transporter ATP-binding protein/permease;protein_id=WP_003408545.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1632761 1633432 . + . ID=gene-DKM08_RS08030;Name=DKM08_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08030;old_locus_tag=DKM08_08020 NZ_QFYX01000001.1 Protein Homology CDS 1632761 1633432 . + 0 ID=cds-WP_003899001.1;Parent=gene-DKM08_RS08030;Dbxref=GenBank:WP_003899001.1;Name=WP_003899001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303192.1;locus_tag=DKM08_RS08030;product=hypothetical protein;protein_id=WP_003899001.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1633429 1633986 . - . ID=gene-DKM08_RS08035;Name=DKM08_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08035;old_locus_tag=DKM08_08025 NZ_QFYX01000001.1 Protein Homology CDS 1633429 1633986 . - 0 ID=cds-WP_003408556.1;Parent=gene-DKM08_RS08035;Dbxref=GenBank:WP_003408556.1;Name=WP_003408556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216265.1;locus_tag=DKM08_RS08035;product=DUF6790 family protein;protein_id=WP_003408556.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1634070 1635668 . - . ID=gene-DKM08_RS08040;Name=fadD1;gbkey=Gene;gene=fadD1;gene_biotype=protein_coding;locus_tag=DKM08_RS08040;old_locus_tag=DKM08_08030 NZ_QFYX01000001.1 Protein Homology CDS 1634070 1635668 . - 0 ID=cds-WP_003408558.1;Parent=gene-DKM08_RS08040;Dbxref=GenBank:WP_003408558.1;Name=WP_003408558.1;gbkey=CDS;gene=fadD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216266.1;locus_tag=DKM08_RS08040;product=fatty-acid--CoA ligase FadD1;protein_id=WP_003408558.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1635866 1637104 . + . ID=gene-DKM08_RS08045;Name=DKM08_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08045;old_locus_tag=DKM08_08035 NZ_QFYX01000001.1 Protein Homology CDS 1635866 1637104 . + 0 ID=cds-WP_181146647.1;Parent=gene-DKM08_RS08045;Dbxref=GenBank:WP_181146647.1;Name=WP_181146647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911631.1;locus_tag=DKM08_RS08045;product=FAD-dependent oxidoreductase;protein_id=WP_181146647.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1637213 1637648 . + . ID=gene-DKM08_RS08050;Name=DKM08_RS08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08050;old_locus_tag=DKM08_08040;partial=true;pseudo=true;start_range=.,1637213 NZ_QFYX01000001.1 Protein Homology CDS 1637213 1637648 . + 0 ID=cds-DKM08_RS08050;Parent=gene-DKM08_RS08050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355438.1;locus_tag=DKM08_RS08050;partial=true;product=Gfo/Idh/MocA family protein;pseudo=true;start_range=.,1637213;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1637715 1640642 . - . ID=gene-DKM08_RS08055;Name=DKM08_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08055;old_locus_tag=DKM08_08045 NZ_QFYX01000001.1 Protein Homology CDS 1637715 1640642 . - 0 ID=cds-WP_009938414.1;Parent=gene-DKM08_RS08055;Dbxref=GenBank:WP_009938414.1;Name=WP_009938414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177830.1;locus_tag=DKM08_RS08055;product=PPE family protein;protein_id=WP_009938414.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1640846 1642537 . - . ID=gene-DKM08_RS08060;Name=DKM08_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08060;old_locus_tag=DKM08_08050 NZ_QFYX01000001.1 Protein Homology CDS 1640846 1642537 . - 0 ID=cds-WP_003408678.1;Parent=gene-DKM08_RS08060;Dbxref=GenBank:WP_003408678.1;Name=WP_003408678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216270.1;locus_tag=DKM08_RS08060;product=DUF4185 domain-containing protein;protein_id=WP_003408678.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1642721 1644298 . - . ID=gene-DKM08_RS08065;Name=DKM08_RS08065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08065;old_locus_tag=DKM08_08055;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1642721 1644298 . - 0 ID=cds-DKM08_RS08065;Parent=gene-DKM08_RS08065;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916028.1;locus_tag=DKM08_RS08065;product=alkaline phosphatase family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1644394 1645538 . - . ID=gene-DKM08_RS08070;Name=DKM08_RS08070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08070;old_locus_tag=DKM08_08060;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1644394 1645538 . - 0 ID=cds-DKM08_RS08070;Parent=gene-DKM08_RS08070;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007171006.1;locus_tag=DKM08_RS08070;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1645764 1646867 . + . ID=gene-DKM08_RS08075;Name=DKM08_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08075;old_locus_tag=DKM08_08065 NZ_QFYX01000001.1 Protein Homology CDS 1645764 1646867 . + 0 ID=cds-WP_003911638.1;Parent=gene-DKM08_RS08075;Dbxref=GenBank:WP_003911638.1;Name=WP_003911638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293176.1;locus_tag=DKM08_RS08075;product=sulfite oxidase;protein_id=WP_003911638.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1647286 1649904 . + . ID=gene-DKM08_RS08080;Name=DKM08_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08080;old_locus_tag=DKM08_08070 NZ_QFYX01000001.1 Protein Homology CDS 1647286 1649904 . + 0 ID=cds-WP_234886453.1;Parent=gene-DKM08_RS08080;Dbxref=GenBank:WP_234886453.1;Name=WP_234886453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00833.1;locus_tag=DKM08_RS08080;product=RND family transporter;protein_id=WP_234886453.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1650225 1650881 . + . ID=gene-DKM08_RS08085;Name=cut1;gbkey=Gene;gene=cut1;gene_biotype=protein_coding;locus_tag=DKM08_RS08085;old_locus_tag=DKM08_08075 NZ_QFYX01000001.1 Protein Homology CDS 1650225 1650881 . + 0 ID=cds-WP_010950592.1;Parent=gene-DKM08_RS08085;Dbxref=GenBank:WP_010950592.1;Name=WP_010950592.1;gbkey=CDS;gene=cut1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288154.1;locus_tag=DKM08_RS08085;product=cutinase Cut1;protein_id=WP_010950592.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1651148 1653130 . - . ID=gene-DKM08_RS08090;Name=DKM08_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08090;old_locus_tag=DKM08_08080 NZ_QFYX01000001.1 Protein Homology CDS 1651148 1653130 . - 0 ID=cds-WP_147020901.1;Parent=gene-DKM08_RS08090;Dbxref=GenBank:WP_147020901.1;Name=WP_147020901.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177831.1;locus_tag=DKM08_RS08090;product=PE family protein;protein_id=WP_147020901.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1653808 1655213 . + . ID=gene-DKM08_RS08095;Name=DKM08_RS08095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08095;old_locus_tag=DKM08_08085;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1653808 1655213 . + 0 ID=cds-DKM08_RS08095;Parent=gene-DKM08_RS08095;Note=frameshifted;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911649.1;locus_tag=DKM08_RS08095;product=WS/DGAT/MGAT family O-acyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1655223 1655606 . - . ID=gene-DKM08_RS08100;Name=DKM08_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08100;old_locus_tag=DKM08_08090 NZ_QFYX01000001.1 Protein Homology CDS 1655223 1655606 . - 0 ID=cds-WP_003899008.1;Parent=gene-DKM08_RS08100;Dbxref=GenBank:WP_003899008.1;Name=WP_003899008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216277.1;locus_tag=DKM08_RS08100;product=DUF5073 family protein;protein_id=WP_003899008.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1655606 1656394 . - . ID=gene-DKM08_RS08105;Name=DKM08_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08105;old_locus_tag=DKM08_08095 NZ_QFYX01000001.1 Protein Homology CDS 1655606 1656394 . - 0 ID=cds-WP_003899009.1;Parent=gene-DKM08_RS08105;Dbxref=GenBank:WP_003899009.1;Name=WP_003899009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216278.1;locus_tag=DKM08_RS08105;product=heavy metal-binding domain-containing protein;protein_id=WP_003899009.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1656534 1657001 . - . ID=gene-DKM08_RS08110;Name=DKM08_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08110;old_locus_tag=DKM08_08100 NZ_QFYX01000001.1 Protein Homology CDS 1656534 1657001 . - 0 ID=cds-WP_003899010.1;Parent=gene-DKM08_RS08110;Dbxref=GenBank:WP_003899010.1;Name=WP_003899010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899010.1;locus_tag=DKM08_RS08110;product=hypothetical protein;protein_id=WP_003899010.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1657412 1658668 . - . ID=gene-DKM08_RS08115;Name=DKM08_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08115;old_locus_tag=DKM08_08105 NZ_QFYX01000001.1 Protein Homology CDS 1657412 1658668 . - 0 ID=cds-WP_023349530.1;Parent=gene-DKM08_RS08115;Dbxref=GenBank:WP_023349530.1;Name=WP_023349530.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=DKM08_RS08115;product=HNH endonuclease signature motif containing protein;protein_id=WP_023349530.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1659089 1659223 . + . ID=gene-DKM08_RS22410;Name=DKM08_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22410 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 1659089 1659223 . + 0 ID=cds-WP_009939418.1;Parent=gene-DKM08_RS22410;Dbxref=GenBank:WP_009939418.1;Name=WP_009939418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22410;product=hypothetical protein;protein_id=WP_009939418.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1659295 1659534 . - . ID=gene-DKM08_RS22700;Name=DKM08_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22700;old_locus_tag=DKM08_08110 NZ_QFYX01000001.1 Protein Homology CDS 1659295 1659534 . - 0 ID=cds-WP_078396687.1;Parent=gene-DKM08_RS22700;Dbxref=GenBank:WP_078396687.1;Name=WP_078396687.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=DKM08_RS22700;product=DDE-type integrase/transposase/recombinase;protein_id=WP_078396687.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1659568 1659687 . - . ID=gene-DKM08_RS22705;Name=DKM08_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22705;old_locus_tag=DKM08_08115 NZ_QFYX01000001.1 Protein Homology CDS 1659568 1659687 . - 0 ID=cds-WP_021083427.1;Parent=gene-DKM08_RS22705;Dbxref=GenBank:WP_021083427.1;Name=WP_021083427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.6;locus_tag=DKM08_RS22705;product=hypothetical protein;protein_id=WP_021083427.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1659890 1660159 . + . ID=gene-DKM08_RS08135;Name=DKM08_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08135;old_locus_tag=DKM08_08125 NZ_QFYX01000001.1 Protein Homology CDS 1659890 1660159 . + 0 ID=cds-WP_003899012.1;Parent=gene-DKM08_RS08135;Dbxref=GenBank:WP_003899012.1;Name=WP_003899012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216282.2;locus_tag=DKM08_RS08135;product=metal-sensitive transcriptional regulator;protein_id=WP_003899012.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1660227 1660586 . + . ID=gene-DKM08_RS08140;Name=DKM08_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08140;old_locus_tag=DKM08_08130 NZ_QFYX01000001.1 Protein Homology CDS 1660227 1660586 . + 0 ID=cds-WP_003408743.1;Parent=gene-DKM08_RS08140;Dbxref=GenBank:WP_003408743.1;Name=WP_003408743.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216283.1;locus_tag=DKM08_RS08140;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003408743.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1660767 1662642 . + . ID=gene-DKM08_RS08145;Name=DKM08_RS08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08145;old_locus_tag=DKM08_08135;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1660767 1662642 . + 0 ID=cds-DKM08_RS08145;Parent=gene-DKM08_RS08145;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177832.1;locus_tag=DKM08_RS08145;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1662798 1664042 . + . ID=gene-DKM08_RS08150;Name=DKM08_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08150;old_locus_tag=DKM08_08140 NZ_QFYX01000001.1 Protein Homology CDS 1662798 1664042 . + 0 ID=cds-WP_003904700.1;Parent=gene-DKM08_RS08150;Dbxref=GenBank:WP_003904700.1;Name=WP_003904700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216285.1;locus_tag=DKM08_RS08150;product=amino acid deaminase/aldolase;protein_id=WP_003904700.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1664131 1665336 . + . ID=gene-DKM08_RS08155;Name=DKM08_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08155;old_locus_tag=DKM08_08145 NZ_QFYX01000001.1 Protein Homology CDS 1664131 1665336 . + 0 ID=cds-WP_003911655.1;Parent=gene-DKM08_RS08155;Dbxref=GenBank:WP_003911655.1;Name=WP_003911655.1;Ontology_term=GO:0006508,GO:0008235,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911655.1;locus_tag=DKM08_RS08155;product=M28 family metallopeptidase;protein_id=WP_003911655.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1665333 1666619 . + . ID=gene-DKM08_RS08160;Name=DKM08_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08160;old_locus_tag=DKM08_08150 NZ_QFYX01000001.1 Protein Homology CDS 1665333 1666619 . + 0 ID=cds-WP_003408749.1;Parent=gene-DKM08_RS08160;Dbxref=GenBank:WP_003408749.1;Name=WP_003408749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216287.1;locus_tag=DKM08_RS08160;product=L-gulono-1%2C4-lactone dehydrogenase;protein_id=WP_003408749.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1666808 1667119 . + . ID=gene-DKM08_RS08165;Name=DKM08_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08165;old_locus_tag=DKM08_08155 NZ_QFYX01000001.1 Protein Homology CDS 1666808 1667119 . + 0 ID=cds-WP_003408753.1;Parent=gene-DKM08_RS08165;Dbxref=GenBank:WP_003408753.1;Name=WP_003408753.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216288.1;locus_tag=DKM08_RS08165;product=ANTAR domain-containing protein;protein_id=WP_003408753.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1667192 1667938 . - . ID=gene-DKM08_RS08170;Name=DKM08_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08170;old_locus_tag=DKM08_08160 NZ_QFYX01000001.1 Protein Homology CDS 1667192 1667938 . - 0 ID=cds-WP_003408754.1;Parent=gene-DKM08_RS08170;Dbxref=GenBank:WP_003408754.1;Name=WP_003408754.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216289.1;locus_tag=DKM08_RS08170;product=IclR family transcriptional regulator;protein_id=WP_003408754.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1668004 1669344 . + . ID=gene-DKM08_RS08175;Name=DKM08_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08175;old_locus_tag=DKM08_08165 NZ_QFYX01000001.1 Protein Homology CDS 1668004 1669344 . + 0 ID=cds-WP_003899017.1;Parent=gene-DKM08_RS08175;Dbxref=GenBank:WP_003899017.1;Name=WP_003899017.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216290.1;locus_tag=DKM08_RS08175;product=FAD-binding oxidoreductase;protein_id=WP_003899017.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1669344 1670162 . + . ID=gene-DKM08_RS08180;Name=DKM08_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08180;old_locus_tag=DKM08_08170 NZ_QFYX01000001.1 Protein Homology CDS 1669344 1670162 . + 0 ID=cds-WP_003408760.1;Parent=gene-DKM08_RS08180;Dbxref=GenBank:WP_003408760.1;Name=WP_003408760.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216291.1;locus_tag=DKM08_RS08180;product=DAPG hydrolase family protein;protein_id=WP_003408760.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1670167 1670727 . - . ID=gene-DKM08_RS08185;Name=DKM08_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08185;old_locus_tag=DKM08_08175 NZ_QFYX01000001.1 Protein Homology CDS 1670167 1670727 . - 0 ID=cds-WP_003899018.1;Parent=gene-DKM08_RS08185;Dbxref=GenBank:WP_003899018.1;Name=WP_003899018.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216292.1;locus_tag=DKM08_RS08185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899018.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1670918 1672132 . + . ID=gene-DKM08_RS08190;Name=cyp144;gbkey=Gene;gene=cyp144;gene_biotype=protein_coding;locus_tag=DKM08_RS08190;old_locus_tag=DKM08_08180 NZ_QFYX01000001.1 Protein Homology CDS 1670918 1672132 . + 0 ID=cds-WP_031657261.1;Parent=gene-DKM08_RS08190;Dbxref=GenBank:WP_031657261.1;Name=WP_031657261.1;gbkey=CDS;gene=cyp144;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911660.1;locus_tag=DKM08_RS08190;product=cytochrome P450 Cyp144;protein_id=WP_031657261.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1672253 1672702 . - . ID=gene-DKM08_RS08195;Name=DKM08_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08195;old_locus_tag=DKM08_08185 NZ_QFYX01000001.1 Protein Homology CDS 1672253 1672702 . - 0 ID=cds-WP_003408775.1;Parent=gene-DKM08_RS08195;Dbxref=GenBank:WP_003408775.1;Name=WP_003408775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216294.1;locus_tag=DKM08_RS08195;product=DUF6941 family protein;protein_id=WP_003408775.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1672858 1674651 . - . ID=gene-DKM08_RS08200;Name=DKM08_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08200;old_locus_tag=DKM08_08190 NZ_QFYX01000001.1 Protein Homology CDS 1672858 1674651 . - 0 ID=cds-WP_003408781.1;Parent=gene-DKM08_RS08200;Dbxref=GenBank:WP_003408781.1;Name=WP_003408781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216295.1;locus_tag=DKM08_RS08200;product=DUF4407 domain-containing protein;protein_id=WP_003408781.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1674871 1675434 . + . ID=gene-DKM08_RS08205;Name=DKM08_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08205;old_locus_tag=DKM08_08195 NZ_QFYX01000001.1 Protein Homology CDS 1674871 1675434 . + 0 ID=cds-WP_003408792.1;Parent=gene-DKM08_RS08205;Dbxref=GenBank:WP_003408792.1;Name=WP_003408792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216296.1;locus_tag=DKM08_RS08205;product=hypothetical protein;protein_id=WP_003408792.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1675474 1677648 . - . ID=gene-DKM08_RS08210;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=DKM08_RS08210;old_locus_tag=DKM08_08200 NZ_QFYX01000001.1 Protein Homology CDS 1675474 1677648 . - 0 ID=cds-WP_003408795.1;Parent=gene-DKM08_RS08210;Dbxref=GenBank:WP_003408795.1;Name=WP_003408795.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216297.1;locus_tag=DKM08_RS08210;product=4-alpha-glucanotransferase;protein_id=WP_003408795.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1677912 1679432 . + . ID=gene-DKM08_RS08215;Name=eccB5;gbkey=Gene;gene=eccB5;gene_biotype=protein_coding;locus_tag=DKM08_RS08215;old_locus_tag=DKM08_08205 NZ_QFYX01000001.1 Protein Homology CDS 1677912 1679432 . + 0 ID=cds-WP_003408797.1;Parent=gene-DKM08_RS08215;Dbxref=GenBank:WP_003408797.1;Name=WP_003408797.1;gbkey=CDS;gene=eccB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216298.1;locus_tag=DKM08_RS08215;product=type VII secretion system ESX-5 subunit EccB5;protein_id=WP_003408797.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1679429 1683604 . + . ID=gene-DKM08_RS08220;Name=eccC5;gbkey=Gene;gene=eccC5;gene_biotype=protein_coding;locus_tag=DKM08_RS08220;old_locus_tag=DKM08_08210 NZ_QFYX01000001.1 Protein Homology CDS 1679429 1683604 . + 0 ID=cds-WP_010950600.1;Parent=gene-DKM08_RS08220;Dbxref=GenBank:WP_010950600.1;Name=WP_010950600.1;gbkey=CDS;gene=eccC5;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410461.1;locus_tag=DKM08_RS08220;product=type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5;protein_id=WP_010950600.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1683619 1684800 . - . ID=gene-DKM08_RS08225;Name=DKM08_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08225;old_locus_tag=DKM08_08215 NZ_QFYX01000001.1 Protein Homology CDS 1683619 1684800 . - 0 ID=cds-WP_003408802.1;Parent=gene-DKM08_RS08225;Dbxref=GenBank:WP_003408802.1;Name=WP_003408802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216301.1;locus_tag=DKM08_RS08225;product=cytochrome P450;protein_id=WP_003408802.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1685000 1685203 . + . ID=gene-DKM08_RS08230;Name=DKM08_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08230;old_locus_tag=DKM08_08220 NZ_QFYX01000001.1 Protein Homology CDS 1685000 1685203 . + 0 ID=cds-WP_003408803.1;Parent=gene-DKM08_RS08230;Dbxref=GenBank:WP_003408803.1;Name=WP_003408803.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216302.1;locus_tag=DKM08_RS08230;product=ferredoxin;protein_id=WP_003408803.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1685473 1686567 . + . ID=gene-DKM08_RS08235;Name=DKM08_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08235;old_locus_tag=DKM08_08225 NZ_QFYX01000001.1 Protein Homology CDS 1685473 1686567 . + 0 ID=cds-WP_010950601.1;Parent=gene-DKM08_RS08235;Dbxref=GenBank:WP_010950601.1;Name=WP_010950601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=DKM08_RS08235;product=type VII secretion system ESX-5 target PPE25;protein_id=WP_010950601.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1686646 1686945 . + . ID=gene-DKM08_RS08240;Name=DKM08_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08240;old_locus_tag=DKM08_08230 NZ_QFYX01000001.1 Protein Homology CDS 1686646 1686945 . + 0 ID=cds-WP_003408976.1;Parent=gene-DKM08_RS08240;Dbxref=GenBank:WP_003408976.1;Name=WP_003408976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177834.1;locus_tag=DKM08_RS08240;product=type VII secretion system ESX-5 target PE18;protein_id=WP_003408976.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1686959 1688140 . + . ID=gene-DKM08_RS08245;Name=DKM08_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08245;old_locus_tag=DKM08_08235 NZ_QFYX01000001.1 Protein Homology CDS 1686959 1688140 . + 0 ID=cds-WP_010950602.1;Parent=gene-DKM08_RS08245;Dbxref=GenBank:WP_010950602.1;Name=WP_010950602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177835.1;locus_tag=DKM08_RS08245;product=type VII secretion system ESX-5 target PPE26;protein_id=WP_010950602.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1688594 1689646 . + . ID=gene-DKM08_RS08255;Name=DKM08_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08255;old_locus_tag=DKM08_08245 NZ_QFYX01000001.1 Protein Homology CDS 1688594 1689646 . + 0 ID=cds-WP_010950603.1;Parent=gene-DKM08_RS08255;Dbxref=GenBank:WP_010950603.1;Name=WP_010950603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177836.1;locus_tag=DKM08_RS08255;product=type VII secretion system ESX-5 target PPE27;protein_id=WP_010950603.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1690073 1690372 . + . ID=gene-DKM08_RS08260;Name=DKM08_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08260;old_locus_tag=DKM08_08250 NZ_QFYX01000001.1 Protein Homology CDS 1690073 1690372 . + 0 ID=cds-WP_003408807.1;Parent=gene-DKM08_RS08260;Dbxref=GenBank:WP_003408807.1;Name=WP_003408807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177837.1;locus_tag=DKM08_RS08260;product=type VII secretion system ESX-5 target PE19;protein_id=WP_003408807.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1690516 1690812 . + . ID=gene-DKM08_RS08265;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=DKM08_RS08265;old_locus_tag=DKM08_08255 NZ_QFYX01000001.1 Protein Homology CDS 1690516 1690812 . + 0 ID=cds-WP_003408810.1;Parent=gene-DKM08_RS08265;Dbxref=GenBank:WP_003408810.1;Name=WP_003408810.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=DKM08_RS08265;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003408810.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1690863 1691147 . + . ID=gene-DKM08_RS08270;Name=esxN;gbkey=Gene;gene=esxN;gene_biotype=protein_coding;locus_tag=DKM08_RS08270;old_locus_tag=DKM08_08260 NZ_QFYX01000001.1 Protein Homology CDS 1690863 1691147 . + 0 ID=cds-WP_003408840.1;Parent=gene-DKM08_RS08270;Dbxref=GenBank:WP_003408840.1;Name=WP_003408840.1;gbkey=CDS;gene=esxN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177838.1;locus_tag=DKM08_RS08270;product=effector;protein_id=WP_003408840.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1691235 1692137 . + . ID=gene-DKM08_RS08275;Name=DKM08_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08275;old_locus_tag=DKM08_08265 NZ_QFYX01000001.1 Protein Homology CDS 1691235 1692137 . + 0 ID=cds-WP_003408846.1;Parent=gene-DKM08_RS08275;Dbxref=GenBank:WP_003408846.1;Name=WP_003408846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216310.1;locus_tag=DKM08_RS08275;product=ESX secretion-associated protein EspG;protein_id=WP_003408846.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1692409 1693920 . + . ID=gene-DKM08_RS08280;Name=eccD5;gbkey=Gene;gene=eccD5;gene_biotype=protein_coding;locus_tag=DKM08_RS08280;old_locus_tag=DKM08_08270 NZ_QFYX01000001.1 Protein Homology CDS 1692409 1693920 . + 0 ID=cds-WP_023349532.1;Parent=gene-DKM08_RS08280;Dbxref=GenBank:WP_023349532.1;Name=WP_023349532.1;gbkey=CDS;gene=eccD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216311.1;locus_tag=DKM08_RS08280;product=type VII secretion system ESX-5 subunit EccD5;protein_id=WP_023349532.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1693898 1695655 . + . ID=gene-DKM08_RS08285;Name=mycP5;gbkey=Gene;gene=mycP5;gene_biotype=protein_coding;locus_tag=DKM08_RS08285;old_locus_tag=DKM08_08275 NZ_QFYX01000001.1 Protein Homology CDS 1693898 1695655 . + 0 ID=cds-WP_003408854.1;Parent=gene-DKM08_RS08285;Dbxref=GenBank:WP_003408854.1;Name=WP_003408854.1;gbkey=CDS;gene=mycP5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216312.1;locus_tag=DKM08_RS08285;product=type VII secretion system ESX-5 serine protease mycosin MycP5;protein_id=WP_003408854.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1695652 1696872 . + . ID=gene-DKM08_RS08290;Name=eccE5;gbkey=Gene;gene=eccE5;gene_biotype=protein_coding;locus_tag=DKM08_RS08290;old_locus_tag=DKM08_08280 NZ_QFYX01000001.1 Protein Homology CDS 1695652 1696872 . + 0 ID=cds-WP_003408859.1;Parent=gene-DKM08_RS08290;Dbxref=GenBank:WP_003408859.1;Name=WP_003408859.1;gbkey=CDS;gene=eccE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216313.1;locus_tag=DKM08_RS08290;product=type VII secretion system ESX-5 subunit EccE5;protein_id=WP_003408859.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1696869 1698701 . + . ID=gene-DKM08_RS08295;Name=eccA5;gbkey=Gene;gene=eccA5;gene_biotype=protein_coding;locus_tag=DKM08_RS08295;old_locus_tag=DKM08_08285 NZ_QFYX01000001.1 Protein Homology CDS 1696869 1698701 . + 0 ID=cds-WP_003408868.1;Parent=gene-DKM08_RS08295;Dbxref=GenBank:WP_003408868.1;Name=WP_003408868.1;gbkey=CDS;gene=eccA5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216314.1;locus_tag=DKM08_RS08295;product=type VII secretion system ESX-5 AAA family ATPase EccA5;protein_id=WP_003408868.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1699328 1699519 . + . ID=gene-DKM08_RS08300;Name=DKM08_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08300;old_locus_tag=DKM08_08290 NZ_QFYX01000001.1 Protein Homology CDS 1699328 1699519 . + 0 ID=cds-WP_003899024.1;Parent=gene-DKM08_RS08300;Dbxref=GenBank:WP_003899024.1;Name=WP_003899024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216315.1;locus_tag=DKM08_RS08300;product=hypothetical protein;protein_id=WP_003899024.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1699622 1701589 . + . ID=gene-DKM08_RS08305;Name=DKM08_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08305;old_locus_tag=DKM08_08295 NZ_QFYX01000001.1 Protein Homology CDS 1699622 1701589 . + 0 ID=cds-WP_010950605.1;Parent=gene-DKM08_RS08305;Dbxref=GenBank:WP_010950605.1;Name=WP_010950605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177839.1;locus_tag=DKM08_RS08305;product=PPE family protein;protein_id=WP_010950605.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1702170 1703314 . + . ID=gene-DKM08_RS08315;Name=DKM08_RS08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08315;old_locus_tag=DKM08_08305;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1702170 1703314 . + 0 ID=cds-DKM08_RS08315;Parent=gene-DKM08_RS08315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177840.1;locus_tag=DKM08_RS08315;product=PPE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1703426 1704817 . + . ID=gene-DKM08_RS08320;Name=DKM08_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08320;old_locus_tag=DKM08_08310 NZ_QFYX01000001.1 Protein Homology CDS 1703426 1704817 . + 0 ID=cds-WP_003409061.1;Parent=gene-DKM08_RS08320;Dbxref=GenBank:WP_003409061.1;Name=WP_003409061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177841.1;locus_tag=DKM08_RS08320;product=PPE family protein;protein_id=WP_003409061.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1704965 1706884 . - . ID=gene-DKM08_RS21580;Name=DKM08_RS21580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21580;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1704965 1706884 . - 0 ID=cds-DKM08_RS21580;Parent=gene-DKM08_RS21580;Note=internal stop;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177842.1;locus_tag=DKM08_RS21580;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1707065 1707391 . - . ID=gene-DKM08_RS08340;Name=DKM08_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08340;old_locus_tag=DKM08_08330 NZ_QFYX01000001.1 Protein Homology CDS 1707065 1707391 . - 0 ID=cds-WP_003409065.1;Parent=gene-DKM08_RS08340;Dbxref=GenBank:WP_003409065.1;Name=WP_003409065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216320.1;locus_tag=DKM08_RS08340;product=DUF732 domain-containing protein;protein_id=WP_003409065.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 1707637 1707811 . + . ID=id-NZ_QFYX01000001.1:1707637..1707811;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 1708114 1708413 . + . ID=gene-DKM08_RS08350;Name=DKM08_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08350;old_locus_tag=DKM08_08340 NZ_QFYX01000001.1 Protein Homology CDS 1708114 1708413 . + 0 ID=cds-WP_003900412.1;Parent=gene-DKM08_RS08350;Dbxref=GenBank:WP_003900412.1;Name=WP_003900412.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177843.1;locus_tag=DKM08_RS08350;product=PE family protein;protein_id=WP_003900412.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1708428 1709639 . + . ID=gene-DKM08_RS08355;Name=DKM08_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08355;old_locus_tag=DKM08_08345 NZ_QFYX01000001.1 Protein Homology CDS 1708428 1709639 . + 0 ID=cds-WP_003409179.1;Parent=gene-DKM08_RS08355;Dbxref=GenBank:WP_003409179.1;Name=WP_003409179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916893.1;locus_tag=DKM08_RS08355;product=PPE family protein;protein_id=WP_003409179.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1709963 1711192 . + . ID=gene-DKM08_RS08360;Name=DKM08_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08360;old_locus_tag=DKM08_08350 NZ_QFYX01000001.1 Protein Homology CDS 1709963 1711192 . + 0 ID=cds-WP_003901258.1;Parent=gene-DKM08_RS08360;Dbxref=GenBank:WP_003901258.1;Name=WP_003901258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177844.1;locus_tag=DKM08_RS08360;product=PPE family protein;protein_id=WP_003901258.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1711324 1712736 . + . ID=gene-DKM08_RS08365;Name=DKM08_RS08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08365;old_locus_tag=DKM08_08355;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1711324 1712736 . + 0 ID=cds-DKM08_RS08365;Parent=gene-DKM08_RS08365;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910448.1;locus_tag=DKM08_RS08365;product=PPE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1713011 1713331 . + . ID=gene-DKM08_RS08370;Name=DKM08_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08370;old_locus_tag=DKM08_08360 NZ_QFYX01000001.1 Protein Homology CDS 1713011 1713331 . + 0 ID=cds-WP_015288168.1;Parent=gene-DKM08_RS08370;Dbxref=GenBank:WP_015288168.1;Name=WP_015288168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288168.1;locus_tag=DKM08_RS08370;product=DUF732 domain-containing protein;protein_id=WP_015288168.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1713485 1714189 . + . ID=gene-DKM08_RS08375;Name=mgtC;gbkey=Gene;gene=mgtC;gene_biotype=protein_coding;locus_tag=DKM08_RS08375;old_locus_tag=DKM08_08365 NZ_QFYX01000001.1 Protein Homology CDS 1713485 1714189 . + 0 ID=cds-WP_003899032.1;Parent=gene-DKM08_RS08375;Dbxref=GenBank:WP_003899032.1;Name=WP_003899032.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mgtC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216327.1;locus_tag=DKM08_RS08375;product=MgtC/SapB family protein;protein_id=WP_003899032.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1714199 1715401 . - . ID=gene-DKM08_RS08380;Name=DKM08_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08380;old_locus_tag=DKM08_08370 NZ_QFYX01000001.1 Protein Homology CDS 1714199 1715401 . - 0 ID=cds-WP_003409193.1;Parent=gene-DKM08_RS08380;Dbxref=GenBank:WP_003409193.1;Name=WP_003409193.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216328.1;locus_tag=DKM08_RS08380;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409193.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1715723 1716154 . - . ID=gene-DKM08_RS08385;Name=DKM08_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08385;old_locus_tag=DKM08_08375 NZ_QFYX01000001.1 Protein Homology CDS 1715723 1716154 . - 0 ID=cds-WP_003409199.1;Parent=gene-DKM08_RS08385;Dbxref=GenBank:WP_003409199.1;Name=WP_003409199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216329.1;locus_tag=DKM08_RS08385;product=DUF4189 domain-containing protein;protein_id=WP_003409199.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1716521 1717465 . + . ID=gene-DKM08_RS08390;Name=DKM08_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08390;old_locus_tag=DKM08_08380 NZ_QFYX01000001.1 Protein Homology CDS 1716521 1717465 . + 0 ID=cds-WP_003899033.1;Parent=gene-DKM08_RS08390;Dbxref=GenBank:WP_003899033.1;Name=WP_003899033.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283784.1;locus_tag=DKM08_RS08390;product=sterol desaturase family protein;protein_id=WP_003899033.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1717570 1718235 . + . ID=gene-DKM08_RS08395;Name=DKM08_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08395;old_locus_tag=DKM08_08385 NZ_QFYX01000001.1 Protein Homology CDS 1717570 1718235 . + 0 ID=cds-WP_003409204.1;Parent=gene-DKM08_RS08395;Dbxref=GenBank:WP_003409204.1;Name=WP_003409204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216331.1;locus_tag=DKM08_RS08395;product=hypothetical protein;protein_id=WP_003409204.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1718316 1719002 . + . ID=gene-DKM08_RS08400;Name=DKM08_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08400;old_locus_tag=DKM08_08390 NZ_QFYX01000001.1 Protein Homology CDS 1718316 1719002 . + 0 ID=cds-WP_003899034.1;Parent=gene-DKM08_RS08400;Dbxref=GenBank:WP_003899034.1;Name=WP_003899034.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725120.1;locus_tag=DKM08_RS08400;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899034.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1719141 1719418 . + . ID=gene-DKM08_RS22095;Name=DKM08_RS22095;end_range=1719418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22095;old_locus_tag=DKM08_08395;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1719141 1719418 . + 0 ID=cds-DKM08_RS22095;Parent=gene-DKM08_RS22095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1719418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977032.1;locus_tag=DKM08_RS22095;partial=true;product=VOC family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1719489 1719563 . + . ID=gene-DKM08_RS08410;Name=DKM08_RS08410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08410;old_locus_tag=DKM08_08400;partial=true;pseudo=true;start_range=.,1719489 NZ_QFYX01000001.1 Protein Homology CDS 1719489 1719563 . + 0 ID=cds-DKM08_RS08410;Parent=gene-DKM08_RS08410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=DKM08_RS08410;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,1719489;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1719637 1721100 . + . ID=gene-DKM08_RS08415;Name=DKM08_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08415;old_locus_tag=DKM08_08405 NZ_QFYX01000001.1 Protein Homology CDS 1719637 1721100 . + 0 ID=cds-WP_003409207.1;Parent=gene-DKM08_RS08415;Dbxref=GenBank:WP_003409207.1;Name=WP_003409207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216333.1;locus_tag=DKM08_RS08415;product=FAD-binding protein;protein_id=WP_003409207.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1722204 1722725 . - . ID=gene-DKM08_RS22105;Name=DKM08_RS22105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22105;partial=true;pseudo=true;start_range=.,1722204 NZ_QFYX01000001.1 Protein Homology CDS 1722204 1722725 . - 0 ID=cds-DKM08_RS22105;Parent=gene-DKM08_RS22105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=DKM08_RS22105;partial=true;product=PE family protein;pseudo=true;start_range=.,1722204;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1722860 1724779 . - . ID=gene-DKM08_RS08425;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=DKM08_RS08425;old_locus_tag=DKM08_08415 NZ_QFYX01000001.1 Protein Homology CDS 1722860 1724779 . - 0 ID=cds-WP_003903636.1;Parent=gene-DKM08_RS08425;Dbxref=GenBank:WP_003903636.1;Name=WP_003903636.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216335.1;locus_tag=DKM08_RS08425;product=vitamin B12 ABC transporter ATP-binding protein BacA;protein_id=WP_003903636.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1724850 1726493 . + . ID=gene-DKM08_RS08430;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=DKM08_RS08430;old_locus_tag=DKM08_08420 NZ_QFYX01000001.1 Protein Homology CDS 1724850 1726493 . + 0 ID=cds-WP_003409218.1;Parent=gene-DKM08_RS08430;Dbxref=GenBank:WP_003409218.1;Name=WP_003409218.1;gbkey=CDS;gene=ilvG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216336.1;locus_tag=DKM08_RS08430;product=acetolactate synthase;protein_id=WP_003409218.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1726598 1728934 . + . ID=gene-DKM08_RS08435;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=DKM08_RS08435;old_locus_tag=DKM08_08425 NZ_QFYX01000001.1 Protein Homology CDS 1726598 1728934 . + 0 ID=cds-WP_003911668.1;Parent=gene-DKM08_RS08435;Dbxref=GenBank:WP_003911668.1;Name=WP_003911668.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524,GO:0016020;gbkey=CDS;gene=secA2;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908708.1;locus_tag=DKM08_RS08435;product=accessory Sec system translocase SecA2;protein_id=WP_003911668.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1729131 1729760 . + . ID=gene-DKM08_RS08440;Name=DKM08_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08440;old_locus_tag=DKM08_08430 NZ_QFYX01000001.1 Protein Homology CDS 1729131 1729760 . + 0 ID=cds-WP_003409227.1;Parent=gene-DKM08_RS08440;Dbxref=GenBank:WP_003409227.1;Name=WP_003409227.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216338.1;locus_tag=DKM08_RS08440;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_003409227.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1729753 1730676 . + . ID=gene-DKM08_RS08445;Name=DKM08_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08445;old_locus_tag=DKM08_08435 NZ_QFYX01000001.1 Protein Homology CDS 1729753 1730676 . + 0 ID=cds-WP_003901262.1;Parent=gene-DKM08_RS08445;Dbxref=GenBank:WP_003901262.1;Name=WP_003901262.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216339.1;locus_tag=DKM08_RS08445;product=DUF881 domain-containing protein;protein_id=WP_003901262.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1730705 1731070 . + . ID=gene-DKM08_RS08450;Name=DKM08_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08450;old_locus_tag=DKM08_08440 NZ_QFYX01000001.1 Protein Homology CDS 1730705 1731070 . + 0 ID=cds-WP_003899037.1;Parent=gene-DKM08_RS08450;Dbxref=GenBank:WP_003899037.1;Name=WP_003899037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216340.1;locus_tag=DKM08_RS08450;product=small basic family protein;protein_id=WP_003899037.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1731087 1731965 . + . ID=gene-DKM08_RS08455;Name=DKM08_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08455;old_locus_tag=DKM08_08445 NZ_QFYX01000001.1 Protein Homology CDS 1731087 1731965 . + 0 ID=cds-WP_003899038.1;Parent=gene-DKM08_RS08455;Dbxref=GenBank:WP_003899038.1;Name=WP_003899038.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216341.1;locus_tag=DKM08_RS08455;product=DUF881 domain-containing protein;protein_id=WP_003899038.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1732003 1732407 . + . ID=gene-DKM08_RS08460;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=DKM08_RS08460;old_locus_tag=DKM08_08450 NZ_QFYX01000001.1 Protein Homology CDS 1732003 1732407 . + 0 ID=cds-WP_003409234.1;Parent=gene-DKM08_RS08460;Dbxref=GenBank:WP_003409234.1;Name=WP_003409234.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216342.1;locus_tag=DKM08_RS08460;product=glycine cleavage system protein GcvH;protein_id=WP_003409234.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1732647 1733135 . + . ID=gene-DKM08_RS08465;Name=garA;gbkey=Gene;gene=garA;gene_biotype=protein_coding;locus_tag=DKM08_RS08465;old_locus_tag=DKM08_08455 NZ_QFYX01000001.1 Protein Homology CDS 1732647 1733135 . + 0 ID=cds-WP_003899041.1;Parent=gene-DKM08_RS08465;Dbxref=GenBank:WP_003899041.1;Name=WP_003899041.1;gbkey=CDS;gene=garA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216343.1;locus_tag=DKM08_RS08465;product=glycogen accumulation regulator GarA;protein_id=WP_003899041.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1733132 1733875 . + . ID=gene-DKM08_RS08470;Name=DKM08_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08470;old_locus_tag=DKM08_08460 NZ_QFYX01000001.1 Protein Homology CDS 1733132 1733875 . + 0 ID=cds-WP_003409239.1;Parent=gene-DKM08_RS08470;Dbxref=GenBank:WP_003409239.1;Name=WP_003409239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216344.1;locus_tag=DKM08_RS08470;product=MerR family transcriptional regulator;protein_id=WP_003409239.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1733994 1734488 . + . ID=gene-DKM08_RS08475;Name=DKM08_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08475;old_locus_tag=DKM08_08465 NZ_QFYX01000001.1 Protein Homology CDS 1733994 1734488 . + 0 ID=cds-WP_010950612.1;Parent=gene-DKM08_RS08475;Dbxref=GenBank:WP_010950612.1;Name=WP_010950612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409242.1;locus_tag=DKM08_RS08475;product=bifunctional nuclease family protein;protein_id=WP_010950612.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1734825 1735457 . + . ID=gene-DKM08_RS08480;Name=DKM08_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08480;old_locus_tag=DKM08_08470 NZ_QFYX01000001.1 Protein Homology CDS 1734825 1735457 . + 0 ID=cds-WP_003911669.1;Parent=gene-DKM08_RS08480;Dbxref=GenBank:WP_003911669.1;Name=WP_003911669.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771372.1;locus_tag=DKM08_RS08480;product=MerR family transcriptional regulator;protein_id=WP_003911669.1;transl_table=11 NZ_QFYX01000001.1 cmsearch riboswitch 1735552 1735649 . + . ID=id-NZ_QFYX01000001.1:1735552..1735649;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 cmsearch riboswitch 1735650 1735783 . + . ID=id-NZ_QFYX01000001.1:1735650..1735783;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000001.1 RefSeq gene 1735816 1738641 . + . ID=gene-DKM08_RS08485;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=DKM08_RS08485;old_locus_tag=DKM08_08475 NZ_QFYX01000001.1 Protein Homology CDS 1735816 1738641 . + 0 ID=cds-WP_010950613.1;Parent=gene-DKM08_RS08485;Dbxref=GenBank:WP_010950613.1;Name=WP_010950613.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216348.1;locus_tag=DKM08_RS08485;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_010950613.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1738868 1739728 . - . ID=gene-DKM08_RS08490;Name=DKM08_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08490;old_locus_tag=DKM08_08480 NZ_QFYX01000001.1 Protein Homology CDS 1738868 1739728 . - 0 ID=cds-WP_003409254.1;Parent=gene-DKM08_RS08490;Dbxref=GenBank:WP_003409254.1;Name=WP_003409254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216349.1;locus_tag=DKM08_RS08490;product=haloalkane dehalogenase;protein_id=WP_003409254.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1739769 1740635 . + . ID=gene-DKM08_RS08495;Name=lipZ;gbkey=Gene;gene=lipZ;gene_biotype=protein_coding;locus_tag=DKM08_RS08495;old_locus_tag=DKM08_08485 NZ_QFYX01000001.1 Protein Homology CDS 1739769 1740635 . + 0 ID=cds-WP_003409255.1;Parent=gene-DKM08_RS08495;Dbxref=GenBank:WP_003409255.1;Name=WP_003409255.1;gbkey=CDS;gene=lipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216350.1;locus_tag=DKM08_RS08495;product=alpha/beta fold hydrolase;protein_id=WP_003409255.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1740640 1742526 . - . ID=gene-DKM08_RS08500;Name=DKM08_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08500;old_locus_tag=DKM08_08490 NZ_QFYX01000001.1 Protein Homology CDS 1740640 1742526 . - 0 ID=cds-WP_003409258.1;Parent=gene-DKM08_RS08500;Dbxref=GenBank:WP_003409258.1;Name=WP_003409258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216351.1;locus_tag=DKM08_RS08500;product=CocE/NonD family hydrolase;protein_id=WP_003409258.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1742542 1744575 . - . ID=gene-DKM08_RS08505;Name=DKM08_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08505;old_locus_tag=DKM08_08495 NZ_QFYX01000001.1 Protein Homology CDS 1742542 1744575 . - 0 ID=cds-WP_010950615.1;Parent=gene-DKM08_RS08505;Dbxref=GenBank:WP_010950615.1;Name=WP_010950615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216352.1;locus_tag=DKM08_RS08505;product=substrate-binding domain-containing protein;protein_id=WP_010950615.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1744695 1746920 . - . ID=gene-DKM08_RS08515;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=DKM08_RS08515;old_locus_tag=DKM08_08505 NZ_QFYX01000001.1 Protein Homology CDS 1744695 1746920 . - 0 ID=cds-WP_003409271.1;Parent=gene-DKM08_RS08515;Dbxref=GenBank:WP_003409271.1;Name=WP_003409271.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216353.1;locus_tag=DKM08_RS08515;product=malate synthase G;protein_id=WP_003409271.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1747196 1747591 . - . ID=gene-DKM08_RS08520;Name=DKM08_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08520;old_locus_tag=DKM08_08510 NZ_QFYX01000001.1 Protein Homology CDS 1747196 1747591 . - 0 ID=cds-WP_003409273.1;Parent=gene-DKM08_RS08520;Dbxref=GenBank:WP_003409273.1;Name=WP_003409273.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216354.1;locus_tag=DKM08_RS08520;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409273.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1747588 1747851 . - . ID=gene-DKM08_RS08525;Name=DKM08_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08525;old_locus_tag=DKM08_08515 NZ_QFYX01000001.1 Protein Homology CDS 1747588 1747851 . - 0 ID=cds-WP_003409276.1;Parent=gene-DKM08_RS08525;Dbxref=GenBank:WP_003409276.1;Name=WP_003409276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216355.1;locus_tag=DKM08_RS08525;product=antitoxin;protein_id=WP_003409276.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1747910 1749457 . - . ID=gene-DKM08_RS08530;Name=DKM08_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08530;old_locus_tag=DKM08_08520 NZ_QFYX01000001.1 Protein Homology CDS 1747910 1749457 . - 0 ID=cds-WP_003904712.1;Parent=gene-DKM08_RS08530;Dbxref=GenBank:WP_003904712.1;Name=WP_003904712.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177847.1;locus_tag=DKM08_RS08530;product=PE family protein;protein_id=WP_003904712.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1749620 1750669 . - . ID=gene-DKM08_RS08535;Name=DKM08_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08535;old_locus_tag=DKM08_08525 NZ_QFYX01000001.1 Protein Homology CDS 1749620 1750669 . - 0 ID=cds-WP_003409281.1;Parent=gene-DKM08_RS08535;Dbxref=GenBank:WP_003409281.1;Name=WP_003409281.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216357.1;locus_tag=DKM08_RS08535;product=hemolysin family protein;protein_id=WP_003409281.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1750669 1752036 . - . ID=gene-DKM08_RS08540;Name=DKM08_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08540;old_locus_tag=DKM08_08530 NZ_QFYX01000001.1 Protein Homology CDS 1750669 1752036 . - 0 ID=cds-WP_003409282.1;Parent=gene-DKM08_RS08540;Dbxref=GenBank:WP_003409282.1;Name=WP_003409282.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216358.1;locus_tag=DKM08_RS08540;product=hemolysin family protein;protein_id=WP_003409282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1752210 1753649 . - . ID=gene-DKM08_RS08545;Name=DKM08_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08545;old_locus_tag=DKM08_08535 NZ_QFYX01000001.1 Protein Homology CDS 1752210 1753649 . - 0 ID=cds-WP_023349537.1;Parent=gene-DKM08_RS08545;Dbxref=GenBank:WP_023349537.1;Name=WP_023349537.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216359.1;locus_tag=DKM08_RS08545;product=GuaB1 family IMP dehydrogenase-related protein;protein_id=WP_023349537.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1753682 1755132 . - . ID=gene-DKM08_RS08550;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=pseudogene;locus_tag=DKM08_RS08550;old_locus_tag=DKM08_08540;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1753682 1755132 . - 0 ID=cds-DKM08_RS08550;Parent=gene-DKM08_RS08550;Note=frameshifted;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177848.1;locus_tag=DKM08_RS08550;product=NADP-dependent phosphogluconate dehydrogenase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1755162 1756112 . - . ID=gene-DKM08_RS08555;Name=blaR;gbkey=Gene;gene=blaR;gene_biotype=protein_coding;locus_tag=DKM08_RS08555;old_locus_tag=DKM08_08545 NZ_QFYX01000001.1 Protein Homology CDS 1755162 1756112 . - 0 ID=cds-WP_003409298.1;Parent=gene-DKM08_RS08555;Dbxref=GenBank:WP_003409298.1;Name=WP_003409298.1;Ontology_term=GO:0008233,GO:0046872,GO:0016020;gbkey=CDS;gene=blaR;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216361.1;locus_tag=DKM08_RS08555;product=M56 family metallopeptidase;protein_id=WP_003409298.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1756127 1756543 . - . ID=gene-DKM08_RS08560;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=DKM08_RS08560;old_locus_tag=DKM08_08550 NZ_QFYX01000001.1 Protein Homology CDS 1756127 1756543 . - 0 ID=cds-WP_010950618.1;Parent=gene-DKM08_RS08560;Dbxref=GenBank:WP_010950618.1;Name=WP_010950618.1;gbkey=CDS;gene=blaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216362.1;locus_tag=DKM08_RS08560;product=transcriptional repressor BlaI;protein_id=WP_010950618.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1756821 1757243 . + . ID=gene-DKM08_RS08565;Name=DKM08_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08565;old_locus_tag=DKM08_08555 NZ_QFYX01000001.1 Protein Homology CDS 1756821 1757243 . + 0 ID=cds-WP_003903650.1;Parent=gene-DKM08_RS08565;Dbxref=GenBank:WP_003903650.1;Name=WP_003903650.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216363.1;locus_tag=DKM08_RS08565;product=PaaI family thioesterase;protein_id=WP_003903650.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1757292 1757594 . + . ID=gene-DKM08_RS08570;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=DKM08_RS08570;old_locus_tag=DKM08_08560 NZ_QFYX01000001.1 Protein Homology CDS 1757292 1757594 . + 0 ID=cds-WP_003409305.1;Parent=gene-DKM08_RS08570;Dbxref=GenBank:WP_003409305.1;Name=WP_003409305.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216364.1;locus_tag=DKM08_RS08570;product=urease subunit gamma;protein_id=WP_003409305.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1757591 1757905 . + . ID=gene-DKM08_RS08575;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=DKM08_RS08575;old_locus_tag=DKM08_08565 NZ_QFYX01000001.1 Protein Homology CDS 1757591 1757905 . + 0 ID=cds-WP_003409308.1;Parent=gene-DKM08_RS08575;Dbxref=GenBank:WP_003409308.1;Name=WP_003409308.1;gbkey=CDS;gene=ureB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216365.1;locus_tag=DKM08_RS08575;product=urease subunit beta;protein_id=WP_003409308.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1757905 1759638 . + . ID=gene-DKM08_RS08580;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=DKM08_RS08580;old_locus_tag=DKM08_08570 NZ_QFYX01000001.1 Protein Homology CDS 1757905 1759638 . + 0 ID=cds-WP_003899049.1;Parent=gene-DKM08_RS08580;Dbxref=GenBank:WP_003899049.1;Name=WP_003899049.1;Ontology_term=GO:0008152,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216366.1;locus_tag=DKM08_RS08580;product=urease subunit alpha;protein_id=WP_003899049.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1759638 1760273 . + . ID=gene-DKM08_RS08585;Name=ureF;gbkey=Gene;gene=ureF;gene_biotype=protein_coding;locus_tag=DKM08_RS08585;old_locus_tag=DKM08_08575 NZ_QFYX01000001.1 Protein Homology CDS 1759638 1760273 . + 0 ID=cds-WP_010950619.1;Parent=gene-DKM08_RS08585;Dbxref=GenBank:WP_010950619.1;Name=WP_010950619.1;Ontology_term=GO:0016151;gbkey=CDS;gene=ureF;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216367.1;locus_tag=DKM08_RS08585;product=urease accessory protein UreF;protein_id=WP_010950619.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1760284 1760958 . + . ID=gene-DKM08_RS08590;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=DKM08_RS08590;old_locus_tag=DKM08_08580 NZ_QFYX01000001.1 Protein Homology CDS 1760284 1760958 . + 0 ID=cds-WP_003409313.1;Parent=gene-DKM08_RS08590;Dbxref=GenBank:WP_003409313.1;Name=WP_003409313.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216368.1;locus_tag=DKM08_RS08590;product=urease accessory protein UreG;protein_id=WP_003409313.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1760948 1761592 . + . ID=gene-DKM08_RS08595;Name=ureD;gbkey=Gene;gene=ureD;gene_biotype=protein_coding;locus_tag=DKM08_RS08595;old_locus_tag=DKM08_08585 NZ_QFYX01000001.1 Protein Homology CDS 1760948 1761592 . + 0 ID=cds-WP_003900422.1;Parent=gene-DKM08_RS08595;Dbxref=GenBank:WP_003900422.1;Name=WP_003900422.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;gene=ureD;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900422.1;locus_tag=DKM08_RS08595;product=urease accessory protein UreD;protein_id=WP_003900422.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1761595 1762986 . - . ID=gene-DKM08_RS08600;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=DKM08_RS08600;old_locus_tag=DKM08_08590 NZ_QFYX01000001.1 Protein Homology CDS 1761595 1762986 . - 0 ID=cds-WP_003409317.1;Parent=gene-DKM08_RS08600;Dbxref=GenBank:WP_003409317.1;Name=WP_003409317.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndh;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216370.1;locus_tag=DKM08_RS08600;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409317.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1763127 1764050 . - . ID=gene-DKM08_RS08605;Name=DKM08_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08605;old_locus_tag=DKM08_08595 NZ_QFYX01000001.1 Protein Homology CDS 1763127 1764050 . - 0 ID=cds-WP_003409319.1;Parent=gene-DKM08_RS08605;Dbxref=GenBank:WP_003409319.1;Name=WP_003409319.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216371.1;locus_tag=DKM08_RS08605;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003409319.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1764089 1764766 . - . ID=gene-DKM08_RS08610;Name=DKM08_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08610;old_locus_tag=DKM08_08600 NZ_QFYX01000001.1 Protein Homology CDS 1764089 1764766 . - 0 ID=cds-WP_010950621.1;Parent=gene-DKM08_RS08610;Dbxref=GenBank:WP_010950621.1;Name=WP_010950621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216372.1;locus_tag=DKM08_RS08610;product=SDR family oxidoreductase;protein_id=WP_010950621.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1764928 1765713 . + . ID=gene-DKM08_RS08615;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=DKM08_RS08615;old_locus_tag=DKM08_08605 NZ_QFYX01000001.1 Protein Homology CDS 1764928 1765713 . + 0 ID=cds-WP_023349538.1;Parent=gene-DKM08_RS08615;Dbxref=GenBank:WP_023349538.1;Name=WP_023349538.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216373.1;locus_tag=DKM08_RS08615;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_023349538.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1765716 1766510 . + . ID=gene-DKM08_RS08620;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=DKM08_RS08620;old_locus_tag=DKM08_08610 NZ_QFYX01000001.1 Protein Homology CDS 1765716 1766510 . + 0 ID=cds-WP_003409329.1;Parent=gene-DKM08_RS08620;Dbxref=GenBank:WP_003409329.1;Name=WP_003409329.1;Ontology_term=GO:0055085,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216374.1;locus_tag=DKM08_RS08620;product=ABC transporter permease;protein_id=WP_003409329.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1766517 1767626 . + . ID=gene-DKM08_RS08625;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=DKM08_RS08625;old_locus_tag=DKM08_08615 NZ_QFYX01000001.1 Protein Homology CDS 1766517 1767626 . + 0 ID=cds-WP_003910464.1;Parent=gene-DKM08_RS08625;Dbxref=GenBank:WP_003910464.1;Name=WP_003910464.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=modC;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216375.1;locus_tag=DKM08_RS08625;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003910464.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1767679 1768656 . + . ID=gene-DKM08_RS08630;Name=apa;gbkey=Gene;gene=apa;gene_biotype=protein_coding;locus_tag=DKM08_RS08630;old_locus_tag=DKM08_08620 NZ_QFYX01000001.1 Protein Homology CDS 1767679 1768656 . + 0 ID=cds-WP_003409337.1;Parent=gene-DKM08_RS08630;Dbxref=GenBank:WP_003409337.1;Name=WP_003409337.1;gbkey=CDS;gene=apa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177849.1;locus_tag=DKM08_RS08630;product=adhesin Apa;protein_id=WP_003409337.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1769108 1769413 . + . ID=gene-DKM08_RS08635;Name=DKM08_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08635;old_locus_tag=DKM08_08625 NZ_QFYX01000001.1 Protein Homology CDS 1769108 1769413 . + 0 ID=cds-WP_003409339.1;Parent=gene-DKM08_RS08635;Dbxref=GenBank:WP_003409339.1;Name=WP_003409339.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216377.1;locus_tag=DKM08_RS08635;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_003409339.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1769488 1770528 . + . ID=gene-DKM08_RS08640;Name=adhA;gbkey=Gene;gene=adhA;gene_biotype=protein_coding;locus_tag=DKM08_RS08640;old_locus_tag=DKM08_08630 NZ_QFYX01000001.1 Protein Homology CDS 1769488 1770528 . + 0 ID=cds-WP_003409345.1;Parent=gene-DKM08_RS08640;Dbxref=GenBank:WP_003409345.1;Name=WP_003409345.1;Ontology_term=GO:0006113,GO:0004022,GO:0008270;gbkey=CDS;gene=adhA;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216378.1;locus_tag=DKM08_RS08640;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_003409345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1770535 1771305 . - . ID=gene-DKM08_RS08645;Name=DKM08_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08645;old_locus_tag=DKM08_08635 NZ_QFYX01000001.1 Protein Homology CDS 1770535 1771305 . - 0 ID=cds-WP_003899053.1;Parent=gene-DKM08_RS08645;Dbxref=GenBank:WP_003899053.1;Name=WP_003899053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003927504.1;locus_tag=DKM08_RS08645;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003899053.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1771298 1771984 . - . ID=gene-DKM08_RS08650;Name=DKM08_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08650;old_locus_tag=DKM08_08640 NZ_QFYX01000001.1 Protein Homology CDS 1771298 1771984 . - 0 ID=cds-WP_003911693.1;Parent=gene-DKM08_RS08650;Dbxref=GenBank:WP_003911693.1;Name=WP_003911693.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911693.1;locus_tag=DKM08_RS08650;product=MOSC domain-containing protein;protein_id=WP_003911693.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1772050 1772910 . - . ID=gene-DKM08_RS08655;Name=DKM08_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08655;old_locus_tag=DKM08_08645 NZ_QFYX01000001.1 Protein Homology CDS 1772050 1772910 . - 0 ID=cds-WP_003409355.1;Parent=gene-DKM08_RS08655;Dbxref=GenBank:WP_003409355.1;Name=WP_003409355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216381.1;locus_tag=DKM08_RS08655;product=SDR family oxidoreductase;protein_id=WP_003409355.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1773006 1775420 . + . ID=gene-DKM08_RS08660;Name=DKM08_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08660;old_locus_tag=DKM08_08650 NZ_QFYX01000001.1 Protein Homology CDS 1773006 1775420 . + 0 ID=cds-WP_015385278.1;Parent=gene-DKM08_RS08660;Dbxref=GenBank:WP_015385278.1;Name=WP_015385278.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924453.1;locus_tag=DKM08_RS08660;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_015385278.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1775708 1777192 . + . ID=gene-DKM08_RS08670;Name=DKM08_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08670;old_locus_tag=DKM08_08660 NZ_QFYX01000001.1 Protein Homology CDS 1775708 1777192 . + 0 ID=cds-WP_003409362.1;Parent=gene-DKM08_RS08670;Dbxref=GenBank:WP_003409362.1;Name=WP_003409362.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216383.1;locus_tag=DKM08_RS08670;product=acetyl-CoA acetyltransferase;protein_id=WP_003409362.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1777291 1779390 . + . ID=gene-DKM08_RS08675;Name=DKM08_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08675;old_locus_tag=DKM08_08665 NZ_QFYX01000001.1 Protein Homology CDS 1777291 1779390 . + 0 ID=cds-WP_003409374.1;Parent=gene-DKM08_RS08675;Dbxref=GenBank:WP_003409374.1;Name=WP_003409374.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216384.1;locus_tag=DKM08_RS08675;product=NAD(P)H-binding protein;protein_id=WP_003409374.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1779404 1780639 . - . ID=gene-DKM08_RS08680;Name=DKM08_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08680;old_locus_tag=DKM08_08670 NZ_QFYX01000001.1 Protein Homology CDS 1779404 1780639 . - 0 ID=cds-WP_003899055.1;Parent=gene-DKM08_RS08680;Dbxref=GenBank:WP_003899055.1;Name=WP_003899055.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216385.1;locus_tag=DKM08_RS08680;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003899055.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1780706 1781353 . - . ID=gene-DKM08_RS08685;Name=DKM08_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08685;old_locus_tag=DKM08_08675 NZ_QFYX01000001.1 Protein Homology CDS 1780706 1781353 . - 0 ID=cds-WP_003409378.1;Parent=gene-DKM08_RS08685;Dbxref=GenBank:WP_003409378.1;Name=WP_003409378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409378.1;locus_tag=DKM08_RS08685;product=hypothetical protein;protein_id=WP_003409378.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1781439 1781828 . - . ID=gene-DKM08_RS08690;Name=DKM08_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08690;old_locus_tag=DKM08_08680 NZ_QFYX01000001.1 Protein Homology CDS 1781439 1781828 . - 0 ID=cds-WP_003409380.1;Parent=gene-DKM08_RS08690;Dbxref=GenBank:WP_003409380.1;Name=WP_003409380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216387.1;locus_tag=DKM08_RS08690;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003409380.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1781851 1783095 . - . ID=gene-DKM08_RS08695;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=DKM08_RS08695;old_locus_tag=DKM08_08685 NZ_QFYX01000001.1 Protein Homology CDS 1781851 1783095 . - 0 ID=cds-WP_003409382.1;Parent=gene-DKM08_RS08695;Dbxref=GenBank:WP_003409382.1;Name=WP_003409382.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216388.1;locus_tag=DKM08_RS08695;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_003409382.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1783118 1783555 . + . ID=gene-DKM08_RS08700;Name=DKM08_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08700;old_locus_tag=DKM08_08690 NZ_QFYX01000001.1 Protein Homology CDS 1783118 1783555 . + 0 ID=cds-WP_003409385.1;Parent=gene-DKM08_RS08700;Dbxref=GenBank:WP_003409385.1;Name=WP_003409385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216389.1;locus_tag=DKM08_RS08700;product=DUF1810 domain-containing protein;protein_id=WP_003409385.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1783610 1784314 . + . ID=gene-DKM08_RS08705;Name=DKM08_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08705;old_locus_tag=DKM08_08695 NZ_QFYX01000001.1 Protein Homology CDS 1783610 1784314 . + 0 ID=cds-WP_003899058.1;Parent=gene-DKM08_RS08705;Dbxref=GenBank:WP_003899058.1;Name=WP_003899058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=DKM08_RS08705;product=EthD domain-containing protein;protein_id=WP_003899058.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1784325 1784768 . + . ID=gene-DKM08_RS08710;Name=DKM08_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08710;old_locus_tag=DKM08_08700 NZ_QFYX01000001.1 Protein Homology CDS 1784325 1784768 . + 0 ID=cds-WP_003899059.1;Parent=gene-DKM08_RS08710;Dbxref=GenBank:WP_003899059.1;Name=WP_003899059.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216391.1;locus_tag=DKM08_RS08710;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899059.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1784774 1784986 . - . ID=gene-DKM08_RS08715;Name=DKM08_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08715;old_locus_tag=DKM08_08705 NZ_QFYX01000001.1 Protein Homology CDS 1784774 1784986 . - 0 ID=cds-WP_003910872.1;Parent=gene-DKM08_RS08715;Dbxref=GenBank:WP_003910872.1;Name=WP_003910872.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910872.1;locus_tag=DKM08_RS08715;product=(2Fe-2S)-binding protein;protein_id=WP_003910872.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1785284 1785763 . + . ID=gene-DKM08_RS08725;Name=bfrA;gbkey=Gene;gene=bfrA;gene_biotype=protein_coding;locus_tag=DKM08_RS08725;old_locus_tag=DKM08_08715 NZ_QFYX01000001.1 Protein Homology CDS 1785284 1785763 . + 0 ID=cds-WP_003409398.1;Parent=gene-DKM08_RS08725;Dbxref=GenBank:WP_003409398.1;Name=WP_003409398.1;gbkey=CDS;gene=bfrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876561.1;locus_tag=DKM08_RS08725;product=bacterioferritin BfrA;protein_id=WP_003409398.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1785848 1787912 . + . ID=gene-DKM08_RS08730;Name=DKM08_RS08730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08730;old_locus_tag=DKM08_08720;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1785848 1787912 . + 0 ID=cds-DKM08_RS08730;Parent=gene-DKM08_RS08730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216393.1;locus_tag=DKM08_RS08730;product=Rv1877 family multidrug efflux MFS transporter;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1787967 1789319 . + . ID=gene-DKM08_RS08735;Name=DKM08_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08735;old_locus_tag=DKM08_08725 NZ_QFYX01000001.1 Protein Homology CDS 1787967 1789319 . + 0 ID=cds-WP_010950627.1;Parent=gene-DKM08_RS08735;Dbxref=GenBank:WP_010950627.1;Name=WP_010950627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216394.1;locus_tag=DKM08_RS08735;product=glutamine synthetase family protein;protein_id=WP_010950627.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1789322 1790458 . + . ID=gene-DKM08_RS08740;Name=DKM08_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08740;old_locus_tag=DKM08_08730 NZ_QFYX01000001.1 Protein Homology CDS 1789322 1790458 . + 0 ID=cds-WP_003899061.1;Parent=gene-DKM08_RS08740;Dbxref=GenBank:WP_003899061.1;Name=WP_003899061.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216395.1;locus_tag=DKM08_RS08740;product=amidohydrolase family protein;protein_id=WP_003899061.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1790486 1791802 . - . ID=gene-DKM08_RS08745;Name=DKM08_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08745;old_locus_tag=DKM08_08735 NZ_QFYX01000001.1 Protein Homology CDS 1790486 1791802 . - 0 ID=cds-WP_003409406.1;Parent=gene-DKM08_RS08745;Dbxref=GenBank:WP_003409406.1;Name=WP_003409406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216396.3;locus_tag=DKM08_RS08745;product=cytochrome P450;protein_id=WP_003409406.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1791852 1792274 . - . ID=gene-DKM08_RS08750;Name=lppE;gbkey=Gene;gene=lppE;gene_biotype=protein_coding;locus_tag=DKM08_RS08750;old_locus_tag=DKM08_08740 NZ_QFYX01000001.1 Protein Homology CDS 1791852 1792274 . - 0 ID=cds-WP_003409409.1;Parent=gene-DKM08_RS08750;Dbxref=GenBank:WP_003409409.1;Name=WP_003409409.1;gbkey=CDS;gene=lppE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216397.1;locus_tag=DKM08_RS08750;product=lipoprotein LpqH;protein_id=WP_003409409.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1792315 1793148 . - . ID=gene-DKM08_RS08755;Name=DKM08_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08755;old_locus_tag=DKM08_08745 NZ_QFYX01000001.1 Protein Homology CDS 1792315 1793148 . - 0 ID=cds-WP_003409413.1;Parent=gene-DKM08_RS08755;Dbxref=GenBank:WP_003409413.1;Name=WP_003409413.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216398.1;locus_tag=DKM08_RS08755;product=SDR family oxidoreductase;protein_id=WP_003409413.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1793176 1793652 . - . ID=gene-DKM08_RS08760;Name=DKM08_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08760;old_locus_tag=DKM08_08750 NZ_QFYX01000001.1 Protein Homology CDS 1793176 1793652 . - 0 ID=cds-WP_003409417.1;Parent=gene-DKM08_RS08760;Dbxref=GenBank:WP_003409417.1;Name=WP_003409417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216399.1;locus_tag=DKM08_RS08760;product=SRPBCC family protein;protein_id=WP_003409417.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1793691 1794221 . - . ID=gene-DKM08_RS08765;Name=rpfC;gbkey=Gene;gene=rpfC;gene_biotype=protein_coding;locus_tag=DKM08_RS08765;old_locus_tag=DKM08_08755 NZ_QFYX01000001.1 Protein Homology CDS 1793691 1794221 . - 0 ID=cds-WP_003409420.1;Parent=gene-DKM08_RS08765;Dbxref=GenBank:WP_003409420.1;Name=WP_003409420.1;Ontology_term=GO:0009372,GO:0042127,GO:0016787;gbkey=CDS;gene=rpfC;go_function=hydrolase activity|0016787||IEA;go_process=quorum sensing|0009372||IEA,regulation of cell population proliferation|0042127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216400.1;locus_tag=DKM08_RS08765;product=resuscitation-promoting factor RpfC;protein_id=WP_003409420.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1794233 1794832 . - . ID=gene-DKM08_RS08770;Name=DKM08_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08770;old_locus_tag=DKM08_08760 NZ_QFYX01000001.1 Protein Homology CDS 1794233 1794832 . - 0 ID=cds-WP_003899064.1;Parent=gene-DKM08_RS08770;Dbxref=GenBank:WP_003899064.1;Name=WP_003899064.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216401.1;locus_tag=DKM08_RS08770;product=chorismate mutase;protein_id=WP_003899064.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1794850 1795827 . - . ID=gene-DKM08_RS08775;Name=ag85B;gbkey=Gene;gene=ag85B;gene_biotype=protein_coding;gene_synonym=fbpB;locus_tag=DKM08_RS08775;old_locus_tag=DKM08_08765 NZ_QFYX01000001.1 Protein Homology CDS 1794850 1795827 . - 0 ID=cds-WP_003409456.1;Parent=gene-DKM08_RS08775;Dbxref=GenBank:WP_003409456.1;Name=WP_003409456.1;gbkey=CDS;gene=ag85B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216402.1;locus_tag=DKM08_RS08775;product=diacylglycerol acyltransferase/mycolyltransferase Ag85B;protein_id=WP_003409456.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1796218 1797360 . + . ID=gene-DKM08_RS08785;Name=DKM08_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08785;old_locus_tag=DKM08_08775 NZ_QFYX01000001.1 Protein Homology CDS 1796218 1797360 . + 0 ID=cds-WP_003899065.1;Parent=gene-DKM08_RS08785;Dbxref=GenBank:WP_003899065.1;Name=WP_003899065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216403.1;locus_tag=DKM08_RS08785;product=DUF7159 family protein;protein_id=WP_003899065.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1797330 1798049 . - . ID=gene-DKM08_RS08790;Name=DKM08_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08790;old_locus_tag=DKM08_08780 NZ_QFYX01000001.1 Protein Homology CDS 1797330 1798049 . - 0 ID=cds-WP_003409492.1;Parent=gene-DKM08_RS08790;Dbxref=GenBank:WP_003409492.1;Name=WP_003409492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409492.1;locus_tag=DKM08_RS08790;product=DUF4389 domain-containing protein;protein_id=WP_003409492.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1798144 1798987 . - . ID=gene-DKM08_RS21840;Name=DKM08_RS21840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21840;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1798144 1798987 . - 0 ID=cds-DKM08_RS21840;Parent=gene-DKM08_RS21840;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020786876.1;locus_tag=DKM08_RS21840;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1799046 1799597 . - . ID=gene-DKM08_RS08810;Name=DKM08_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08810;old_locus_tag=DKM08_08800 NZ_QFYX01000001.1 Protein Homology CDS 1799046 1799597 . - 0 ID=cds-WP_003911699.1;Parent=gene-DKM08_RS08810;Dbxref=GenBank:WP_003911699.1;Name=WP_003911699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911699.1;locus_tag=DKM08_RS08810;product=YceI family protein;protein_id=WP_003911699.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1799711 1800118 . + . ID=gene-DKM08_RS08815;Name=DKM08_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08815;old_locus_tag=DKM08_08805 NZ_QFYX01000001.1 Protein Homology CDS 1799711 1800118 . + 0 ID=cds-WP_003409509.1;Parent=gene-DKM08_RS08815;Dbxref=GenBank:WP_003409509.1;Name=WP_003409509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216407.1;locus_tag=DKM08_RS08815;product=hypothetical protein;protein_id=WP_003409509.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1800135 1800446 . + . ID=gene-DKM08_RS08820;Name=DKM08_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08820;old_locus_tag=DKM08_08810 NZ_QFYX01000001.1 Protein Homology CDS 1800135 1800446 . + 0 ID=cds-WP_003409512.1;Parent=gene-DKM08_RS08820;Dbxref=GenBank:WP_003409512.1;Name=WP_003409512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216408.1;locus_tag=DKM08_RS08820;product=hypothetical protein;protein_id=WP_003409512.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1800456 1800674 . + . ID=gene-DKM08_RS08825;Name=DKM08_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08825;old_locus_tag=DKM08_08815 NZ_QFYX01000001.1 Protein Homology CDS 1800456 1800674 . + 0 ID=cds-WP_003409515.1;Parent=gene-DKM08_RS08825;Dbxref=GenBank:WP_003409515.1;Name=WP_003409515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216409.1;locus_tag=DKM08_RS08825;product=hypothetical protein;protein_id=WP_003409515.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1800709 1801839 . - . ID=gene-DKM08_RS08830;Name=DKM08_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08830;old_locus_tag=DKM08_08820 NZ_QFYX01000001.1 Protein Homology CDS 1800709 1801839 . - 0 ID=cds-WP_003409518.1;Parent=gene-DKM08_RS08830;Dbxref=GenBank:WP_003409518.1;Name=WP_003409518.1;Ontology_term=GO:0010181,GO:0018580;gbkey=CDS;go_function=FMN binding|0010181||IEA,nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216410.1;locus_tag=DKM08_RS08830;product=nitronate monooxygenase;protein_id=WP_003409518.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1801887 1802060 . - . ID=gene-DKM08_RS21585;Name=DKM08_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21585 NZ_QFYX01000001.1 Protein Homology CDS 1801887 1802060 . - 0 ID=cds-WP_015456321.1;Parent=gene-DKM08_RS21585;Dbxref=GenBank:WP_015456321.1;Name=WP_015456321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456321.1;locus_tag=DKM08_RS21585;product=hypothetical protein;protein_id=WP_015456321.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1802491 1803515 . + . ID=gene-DKM08_RS08845;Name=DKM08_RS08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08845;old_locus_tag=DKM08_08835;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1802491 1803515 . + 0 ID=cds-DKM08_RS08845;Parent=gene-DKM08_RS08845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771251.1;locus_tag=DKM08_RS08845;product=alcohol dehydrogenase family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1803505 1804416 . - . ID=gene-DKM08_RS08850;Name=DKM08_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08850;old_locus_tag=DKM08_08840 NZ_QFYX01000001.1 Protein Homology CDS 1803505 1804416 . - 0 ID=cds-WP_003409526.1;Parent=gene-DKM08_RS08850;Dbxref=GenBank:WP_003409526.1;Name=WP_003409526.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216412.1;locus_tag=DKM08_RS08850;product=class I SAM-dependent methyltransferase;protein_id=WP_003409526.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1804421 1804852 . - . ID=gene-DKM08_RS08855;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=DKM08_RS08855;old_locus_tag=DKM08_08845 NZ_QFYX01000001.1 Protein Homology CDS 1804421 1804852 . - 0 ID=cds-WP_003409533.1;Parent=gene-DKM08_RS08855;Dbxref=GenBank:WP_003409533.1;Name=WP_003409533.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216413.1;locus_tag=DKM08_RS08855;product=D-aminoacyl-tRNA deacylase;protein_id=WP_003409533.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1804910 1805218 . + . ID=gene-DKM08_RS08860;Name=DKM08_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08860;old_locus_tag=DKM08_08850 NZ_QFYX01000001.1 Protein Homology CDS 1804910 1805218 . + 0 ID=cds-WP_003409536.1;Parent=gene-DKM08_RS08860;Dbxref=GenBank:WP_003409536.1;Name=WP_003409536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216414.1;locus_tag=DKM08_RS08860;product=MTH1187 family thiamine-binding protein;protein_id=WP_003409536.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1805184 1805699 . - . ID=gene-DKM08_RS21590;Name=DKM08_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21590 NZ_QFYX01000001.1 Protein Homology CDS 1805184 1805699 . - 0 ID=cds-WP_003409537.1;Parent=gene-DKM08_RS21590;Dbxref=GenBank:WP_003409537.1;Name=WP_003409537.1;Ontology_term=GO:0072570;gbkey=CDS;go_function=ADP-D-ribose binding|0072570||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303272.1;locus_tag=DKM08_RS21590;product=macro domain-containing protein;protein_id=WP_003409537.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1805940 1806263 . + . ID=gene-DKM08_RS21595;Name=DKM08_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21595 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 1805940 1806263 . + 0 ID=cds-WP_128882532.1;Parent=gene-DKM08_RS21595;Dbxref=GenBank:WP_128882532.1;Name=WP_128882532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21595;product=hypothetical protein;protein_id=WP_128882532.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1806260 1807648 . - . ID=gene-DKM08_RS08870;Name=lipJ;gbkey=Gene;gene=lipJ;gene_biotype=protein_coding;locus_tag=DKM08_RS08870;old_locus_tag=DKM08_08860 NZ_QFYX01000001.1 Protein Homology CDS 1806260 1807648 . - 0 ID=cds-WP_010950630.1;Parent=gene-DKM08_RS08870;Dbxref=GenBank:WP_010950630.1;Name=WP_010950630.1;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;gene=lipJ;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216416.1;locus_tag=DKM08_RS08870;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_010950630.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1807677 1808969 . + . ID=gene-DKM08_RS08875;Name=cinA;gbkey=Gene;gene=cinA;gene_biotype=protein_coding;locus_tag=DKM08_RS08875;old_locus_tag=DKM08_08865 NZ_QFYX01000001.1 Protein Homology CDS 1807677 1808969 . + 0 ID=cds-WP_003900426.1;Parent=gene-DKM08_RS08875;Dbxref=GenBank:WP_003900426.1;Name=WP_003900426.1;gbkey=CDS;gene=cinA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216417.1;locus_tag=DKM08_RS08875;product=competence/damage-inducible protein A;protein_id=WP_003900426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1809021 1810289 . - . ID=gene-DKM08_RS08880;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=DKM08_RS08880;old_locus_tag=DKM08_08870 NZ_QFYX01000001.1 Protein Homology CDS 1809021 1810289 . - 0 ID=cds-WP_003900427.1;Parent=gene-DKM08_RS08880;Dbxref=GenBank:WP_003900427.1;Name=WP_003900427.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;gene=nanT;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216418.1;locus_tag=DKM08_RS08880;product=sialate:H+ symport family MFS transporter;protein_id=WP_003900427.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1810379 1810783 . + . ID=gene-DKM08_RS08885;Name=DKM08_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08885;old_locus_tag=DKM08_08875 NZ_QFYX01000001.1 Protein Homology CDS 1810379 1810783 . + 0 ID=cds-WP_003409542.1;Parent=gene-DKM08_RS08885;Dbxref=GenBank:WP_003409542.1;Name=WP_003409542.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216419.1;locus_tag=DKM08_RS08885;product=phage holin family protein;protein_id=WP_003409542.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1810969 1811400 . + . ID=gene-DKM08_RS08890;Name=DKM08_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08890;old_locus_tag=DKM08_08880 NZ_QFYX01000001.1 Protein Homology CDS 1810969 1811400 . + 0 ID=cds-WP_010950631.1;Parent=gene-DKM08_RS08890;Dbxref=GenBank:WP_010950631.1;Name=WP_010950631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216420.1;locus_tag=DKM08_RS08890;product=anti-sigma factor antagonist;protein_id=WP_010950631.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1811448 1812410 . - . ID=gene-DKM08_RS08895;Name=aao;gbkey=Gene;gene=aao;gene_biotype=protein_coding;locus_tag=DKM08_RS08895;old_locus_tag=DKM08_08885 NZ_QFYX01000001.1 Protein Homology CDS 1811448 1812410 . - 0 ID=cds-WP_003409545.1;Parent=gene-DKM08_RS08895;Dbxref=GenBank:WP_003409545.1;Name=WP_003409545.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=aao;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216421.1;locus_tag=DKM08_RS08895;product=FAD-dependent oxidoreductase;protein_id=WP_003409545.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1812440 1812910 . - . ID=gene-DKM08_RS08900;Name=DKM08_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08900;old_locus_tag=DKM08_08890 NZ_QFYX01000001.1 Protein Homology CDS 1812440 1812910 . - 0 ID=cds-WP_003900428.1;Parent=gene-DKM08_RS08900;Dbxref=GenBank:WP_003900428.1;Name=WP_003900428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216422.1;locus_tag=DKM08_RS08900;product=hypothetical protein;protein_id=WP_003900428.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1813250 1813714 . - . ID=gene-DKM08_RS08905;Name=DKM08_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08905;old_locus_tag=DKM08_08895 NZ_QFYX01000001.1 Protein Homology CDS 1813250 1813714 . - 0 ID=cds-WP_014585239.1;Parent=gene-DKM08_RS08905;Dbxref=GenBank:WP_014585239.1;Name=WP_014585239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585239.1;locus_tag=DKM08_RS08905;product=DUF4262 domain-containing protein;protein_id=WP_014585239.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1813904 1816126 . - . ID=gene-DKM08_RS08910;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=DKM08_RS08910;old_locus_tag=DKM08_08900 NZ_QFYX01000001.1 Protein Homology CDS 1813904 1816126 . - 0 ID=cds-WP_003901285.1;Parent=gene-DKM08_RS08910;Dbxref=GenBank:WP_003901285.1;Name=WP_003901285.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216424.1;locus_tag=DKM08_RS08910;product=catalase/peroxidase HPI;protein_id=WP_003901285.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1816164 1816607 . - . ID=gene-DKM08_RS08915;Name=furA;gbkey=Gene;gene=furA;gene_biotype=protein_coding;locus_tag=DKM08_RS08915;old_locus_tag=DKM08_08905 NZ_QFYX01000001.1 Protein Homology CDS 1816164 1816607 . - 0 ID=cds-WP_003899076.1;Parent=gene-DKM08_RS08915;Dbxref=GenBank:WP_003899076.1;Name=WP_003899076.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=furA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216425.2;locus_tag=DKM08_RS08915;product=Fur family transcriptional regulator;protein_id=WP_003899076.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1816721 1817314 . - . ID=gene-DKM08_RS08920;Name=DKM08_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08920;old_locus_tag=DKM08_08910 NZ_QFYX01000001.1 Protein Homology CDS 1816721 1817314 . - 0 ID=cds-WP_003409566.1;Parent=gene-DKM08_RS08920;Dbxref=GenBank:WP_003409566.1;Name=WP_003409566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216426.1;locus_tag=DKM08_RS08920;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409566.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1817397 1818002 . - . ID=gene-DKM08_RS08925;Name=lppC;gbkey=Gene;gene=lppC;gene_biotype=protein_coding;locus_tag=DKM08_RS08925;old_locus_tag=DKM08_08915 NZ_QFYX01000001.1 Protein Homology CDS 1817397 1818002 . - 0 ID=cds-WP_003409568.1;Parent=gene-DKM08_RS08925;Dbxref=GenBank:WP_003409568.1;Name=WP_003409568.1;gbkey=CDS;gene=lppC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216427.1;locus_tag=DKM08_RS08925;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409568.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1818102 1819106 . - . ID=gene-DKM08_RS08930;Name=DKM08_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08930;old_locus_tag=DKM08_08920 NZ_QFYX01000001.1 Protein Homology CDS 1818102 1819106 . - 0 ID=cds-WP_003409570.1;Parent=gene-DKM08_RS08930;Dbxref=GenBank:WP_003409570.1;Name=WP_003409570.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216428.1;locus_tag=DKM08_RS08930;product=synaptic vesicle VAT-1 family membrane protein;protein_id=WP_003409570.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1819206 1819958 . + . ID=gene-DKM08_RS08935;Name=DKM08_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08935;old_locus_tag=DKM08_08925 NZ_QFYX01000001.1 Protein Homology CDS 1819206 1819958 . + 0 ID=cds-WP_003409574.1;Parent=gene-DKM08_RS08935;Dbxref=GenBank:WP_003409574.1;Name=WP_003409574.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216429.1;locus_tag=DKM08_RS08935;product=MBL fold metallo-hydrolase;protein_id=WP_003409574.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1819936 1820343 . - . ID=gene-DKM08_RS08940;Name=DKM08_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08940;old_locus_tag=DKM08_08930 NZ_QFYX01000001.1 Protein Homology CDS 1819936 1820343 . - 0 ID=cds-WP_003409577.1;Parent=gene-DKM08_RS08940;Dbxref=GenBank:WP_003409577.1;Name=WP_003409577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216430.1;locus_tag=DKM08_RS08940;product=hypothetical protein;protein_id=WP_003409577.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1820478 1822778 . + . ID=gene-DKM08_RS08945;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=DKM08_RS08945;old_locus_tag=DKM08_08935 NZ_QFYX01000001.1 Protein Homology CDS 1820478 1822778 . + 0 ID=cds-WP_003409584.1;Parent=gene-DKM08_RS08945;Dbxref=GenBank:WP_003409584.1;Name=WP_003409584.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409584.1;locus_tag=DKM08_RS08945;product=isocitrate lyase ICL2;protein_id=WP_003409584.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1822948 1828041 . - . ID=gene-DKM08_RS08950;Name=DKM08_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08950;old_locus_tag=DKM08_08940 NZ_QFYX01000001.1 Protein Homology CDS 1822948 1828041 . - 0 ID=cds-WP_147020907.1;Parent=gene-DKM08_RS08950;Dbxref=GenBank:WP_147020907.1;Name=WP_147020907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293293.1;locus_tag=DKM08_RS08950;product=PPE family protein;protein_id=WP_147020907.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1828379 1831343 . - . ID=gene-DKM08_RS08955;Name=DKM08_RS08955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS08955;old_locus_tag=DKM08_08945;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1828379 1831343 . - 0 ID=cds-DKM08_RS08955;Parent=gene-DKM08_RS08955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177850.1;locus_tag=DKM08_RS08955;product=PPE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1831792 1832256 . - . ID=gene-DKM08_RS08960;Name=DKM08_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08960;old_locus_tag=DKM08_08950 NZ_QFYX01000001.1 Protein Homology CDS 1831792 1832256 . - 0 ID=cds-WP_003899082.1;Parent=gene-DKM08_RS08960;Dbxref=GenBank:WP_003899082.1;Name=WP_003899082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216435.1;locus_tag=DKM08_RS08960;product=SRPBCC family protein;protein_id=WP_003899082.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1832354 1833217 . + . ID=gene-DKM08_RS08965;Name=DKM08_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08965;old_locus_tag=DKM08_08955 NZ_QFYX01000001.1 Protein Homology CDS 1832354 1833217 . + 0 ID=cds-WP_003409654.1;Parent=gene-DKM08_RS08965;Dbxref=GenBank:WP_003409654.1;Name=WP_003409654.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216436.1;locus_tag=DKM08_RS08965;product=lysophospholipid acyltransferase family protein;protein_id=WP_003409654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1833255 1834526 . - . ID=gene-DKM08_RS08970;Name=lppF;gbkey=Gene;gene=lppF;gene_biotype=protein_coding;locus_tag=DKM08_RS08970;old_locus_tag=DKM08_08960 NZ_QFYX01000001.1 Protein Homology CDS 1833255 1834526 . - 0 ID=cds-WP_003409666.1;Parent=gene-DKM08_RS08970;Dbxref=GenBank:WP_003409666.1;Name=WP_003409666.1;gbkey=CDS;gene=lppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216437.1;locus_tag=DKM08_RS08970;product=haloacid dehalogenase-like hydrolase;protein_id=WP_003409666.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1834798 1835913 . + . ID=gene-DKM08_RS08975;Name=DKM08_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08975;old_locus_tag=DKM08_08965 NZ_QFYX01000001.1 Protein Homology CDS 1834798 1835913 . + 0 ID=cds-WP_003409667.1;Parent=gene-DKM08_RS08975;Dbxref=GenBank:WP_003409667.1;Name=WP_003409667.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216438.1;locus_tag=DKM08_RS08975;product=serine hydrolase domain-containing protein;protein_id=WP_003409667.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1835964 1837244 . + . ID=gene-DKM08_RS08980;Name=lipD;gbkey=Gene;gene=lipD;gene_biotype=protein_coding;locus_tag=DKM08_RS08980;old_locus_tag=DKM08_08970 NZ_QFYX01000001.1 Protein Homology CDS 1835964 1837244 . + 0 ID=cds-WP_031657265.1;Parent=gene-DKM08_RS08980;Dbxref=GenBank:WP_031657265.1;Name=WP_031657265.1;gbkey=CDS;gene=lipD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911710.1;locus_tag=DKM08_RS08980;product=lipase LipD;protein_id=WP_031657265.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1837281 1837661 . - . ID=gene-DKM08_RS08985;Name=DKM08_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS08985;old_locus_tag=DKM08_08975 NZ_QFYX01000001.1 Protein Homology CDS 1837281 1837661 . - 0 ID=cds-WP_003900434.1;Parent=gene-DKM08_RS08985;Dbxref=GenBank:WP_003900434.1;Name=WP_003900434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216440.1;locus_tag=DKM08_RS08985;product=hypothetical protein;protein_id=WP_003900434.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1837818 1839680 . + . ID=gene-DKM08_RS08990;Name=fadD31;gbkey=Gene;gene=fadD31;gene_biotype=protein_coding;gene_synonym=faaL31;locus_tag=DKM08_RS08990;old_locus_tag=DKM08_08980 NZ_QFYX01000001.1 Protein Homology CDS 1837818 1839680 . + 0 ID=cds-WP_003409680.1;Parent=gene-DKM08_RS08990;Dbxref=GenBank:WP_003409680.1;Name=WP_003409680.1;gbkey=CDS;gene=fadD31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216441.2;locus_tag=DKM08_RS08990;product=fatty-acid--AMP ligase FAAL31/FadD31;protein_id=WP_003409680.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1839688 1840167 . - . ID=gene-DKM08_RS08995;Name=mpt63;gbkey=Gene;gene=mpt63;gene_biotype=protein_coding;locus_tag=DKM08_RS08995;old_locus_tag=DKM08_08985 NZ_QFYX01000001.1 Protein Homology CDS 1839688 1840167 . - 0 ID=cds-WP_003409684.1;Parent=gene-DKM08_RS08995;Dbxref=GenBank:WP_003409684.1;Name=WP_003409684.1;gbkey=CDS;gene=mpt63;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216442.1;locus_tag=DKM08_RS08995;product=immunoprotective protein Mpt63;protein_id=WP_003409684.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1840404 1841177 . + . ID=gene-DKM08_RS09000;Name=DKM08_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09000;old_locus_tag=DKM08_08990 NZ_QFYX01000001.1 Protein Homology CDS 1840404 1841177 . + 0 ID=cds-WP_031355555.1;Parent=gene-DKM08_RS09000;Dbxref=GenBank:WP_031355555.1;Name=WP_031355555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216443.1;locus_tag=DKM08_RS09000;product=YqjF family protein;protein_id=WP_031355555.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1841181 1841948 . - . ID=gene-DKM08_RS09005;Name=DKM08_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09005;old_locus_tag=DKM08_08995 NZ_QFYX01000001.1 Protein Homology CDS 1841181 1841948 . - 0 ID=cds-WP_003409686.1;Parent=gene-DKM08_RS09005;Dbxref=GenBank:WP_003409686.1;Name=WP_003409686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216444.1;locus_tag=DKM08_RS09005;product=SDR family oxidoreductase;protein_id=WP_003409686.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1841993 1842637 . - . ID=gene-DKM08_RS09010;Name=DKM08_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09010;old_locus_tag=DKM08_09000 NZ_QFYX01000001.1 Protein Homology CDS 1841993 1842637 . - 0 ID=cds-WP_003409689.1;Parent=gene-DKM08_RS09010;Dbxref=GenBank:WP_003409689.1;Name=WP_003409689.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216445.1;locus_tag=DKM08_RS09010;product=TIGR03085 family metal-binding protein;protein_id=WP_003409689.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1842649 1843173 . - . ID=gene-DKM08_RS09015;Name=DKM08_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09015;old_locus_tag=DKM08_09005 NZ_QFYX01000001.1 Protein Homology CDS 1842649 1843173 . - 0 ID=cds-WP_003409694.1;Parent=gene-DKM08_RS09015;Dbxref=GenBank:WP_003409694.1;Name=WP_003409694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216446.1;locus_tag=DKM08_RS09015;product=hypothetical protein;protein_id=WP_003409694.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1843191 1843970 . - . ID=gene-DKM08_RS09020;Name=DKM08_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09020;old_locus_tag=DKM08_09010 NZ_QFYX01000001.1 Protein Homology CDS 1843191 1843970 . - 0 ID=cds-WP_003899087.1;Parent=gene-DKM08_RS09020;Dbxref=GenBank:WP_003899087.1;Name=WP_003899087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899087.1;locus_tag=DKM08_RS09020;product=HTH-type transcriptional regulator;protein_id=WP_003899087.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1844103 1844600 . + . ID=gene-DKM08_RS09025;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=DKM08_RS09025;old_locus_tag=DKM08_09015 NZ_QFYX01000001.1 Protein Homology CDS 1844103 1844600 . + 0 ID=cds-WP_003409700.1;Parent=gene-DKM08_RS09025;Dbxref=GenBank:WP_003409700.1;Name=WP_003409700.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216448.1;locus_tag=DKM08_RS09025;product=thiol peroxidase;protein_id=WP_003409700.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1844597 1845688 . - . ID=gene-DKM08_RS09030;Name=DKM08_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09030;old_locus_tag=DKM08_09020 NZ_QFYX01000001.1 Protein Homology CDS 1844597 1845688 . - 0 ID=cds-WP_003900437.1;Parent=gene-DKM08_RS09030;Dbxref=GenBank:WP_003900437.1;Name=WP_003900437.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216449.1;locus_tag=DKM08_RS09030;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900437.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1845690 1846919 . - . ID=gene-DKM08_RS09035;Name=DKM08_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09035;old_locus_tag=DKM08_09025 NZ_QFYX01000001.1 Protein Homology CDS 1845690 1846919 . - 0 ID=cds-WP_003900438.1;Parent=gene-DKM08_RS09035;Dbxref=GenBank:WP_003900438.1;Name=WP_003900438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216450.1;locus_tag=DKM08_RS09035;product=acyl-CoA dehydrogenase;protein_id=WP_003900438.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1846934 1847890 . - . ID=gene-DKM08_RS09040;Name=DKM08_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09040;old_locus_tag=DKM08_09030 NZ_QFYX01000001.1 Protein Homology CDS 1846934 1847890 . - 0 ID=cds-WP_003409707.1;Parent=gene-DKM08_RS09040;Dbxref=GenBank:WP_003409707.1;Name=WP_003409707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216451.1;locus_tag=DKM08_RS09040;product=enoyl-CoA hydratase;protein_id=WP_003409707.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1848115 1849224 . + . ID=gene-DKM08_RS09050;Name=DKM08_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09050;old_locus_tag=DKM08_09040 NZ_QFYX01000001.1 Protein Homology CDS 1848115 1849224 . + 0 ID=cds-WP_003904740.1;Parent=gene-DKM08_RS09050;Dbxref=GenBank:WP_003904740.1;Name=WP_003904740.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216452.1;locus_tag=DKM08_RS09050;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003904740.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1849227 1851746 . + . ID=gene-DKM08_RS09055;Name=DKM08_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09055;old_locus_tag=DKM08_09045 NZ_QFYX01000001.1 Protein Homology CDS 1849227 1851746 . + 0 ID=cds-WP_003409714.1;Parent=gene-DKM08_RS09055;Dbxref=GenBank:WP_003409714.1;Name=WP_003409714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216453.1;locus_tag=DKM08_RS09055;product=FAD-binding oxidoreductase;protein_id=WP_003409714.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1851758 1852828 . + . ID=gene-DKM08_RS09060;Name=ephB;gbkey=Gene;gene=ephB;gene_biotype=protein_coding;locus_tag=DKM08_RS09060;old_locus_tag=DKM08_09050 NZ_QFYX01000001.1 Protein Homology CDS 1851758 1852828 . + 0 ID=cds-WP_003899091.1;Parent=gene-DKM08_RS09060;Dbxref=GenBank:WP_003899091.1;Name=WP_003899091.1;gbkey=CDS;gene=ephB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216454.1;locus_tag=DKM08_RS09060;product=epoxide hydrolase EphB;protein_id=WP_003899091.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1852825 1853340 . + . ID=gene-DKM08_RS09065;Name=DKM08_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09065;old_locus_tag=DKM08_09055 NZ_QFYX01000001.1 Protein Homology CDS 1852825 1853340 . + 0 ID=cds-WP_003409718.1;Parent=gene-DKM08_RS09065;Dbxref=GenBank:WP_003409718.1;Name=WP_003409718.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216455.1;locus_tag=DKM08_RS09065;product=flavin reductase family protein;protein_id=WP_003409718.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1853337 1854398 . + . ID=gene-DKM08_RS09070;Name=DKM08_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09070;old_locus_tag=DKM08_09060 NZ_QFYX01000001.1 Protein Homology CDS 1853337 1854398 . + 0 ID=cds-WP_003899092.1;Parent=gene-DKM08_RS09070;Dbxref=GenBank:WP_003899092.1;Name=WP_003899092.1;Ontology_term=GO:0008686;gbkey=CDS;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177851.1;locus_tag=DKM08_RS09070;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_003899092.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1854395 1855165 . + . ID=gene-DKM08_RS09075;Name=DKM08_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09075;old_locus_tag=DKM08_09065 NZ_QFYX01000001.1 Protein Homology CDS 1854395 1855165 . + 0 ID=cds-WP_003409775.1;Parent=gene-DKM08_RS09075;Dbxref=GenBank:WP_003409775.1;Name=WP_003409775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216457.1;locus_tag=DKM08_RS09075;product=SDR family oxidoreductase;protein_id=WP_003409775.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1855375 1855704 . - . ID=gene-DKM08_RS09080;Name=DKM08_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09080;old_locus_tag=DKM08_09070 NZ_QFYX01000001.1 Protein Homology CDS 1855375 1855704 . - 0 ID=cds-WP_003409778.1;Parent=gene-DKM08_RS09080;Dbxref=GenBank:WP_003409778.1;Name=WP_003409778.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216458.1;locus_tag=DKM08_RS09080;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003409778.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1855701 1856078 . - . ID=gene-DKM08_RS09085;Name=mazE5;gbkey=Gene;gene=mazE5;gene_biotype=protein_coding;locus_tag=DKM08_RS09085;old_locus_tag=DKM08_09075 NZ_QFYX01000001.1 Protein Homology CDS 1855701 1856078 . - 0 ID=cds-WP_023349542.1;Parent=gene-DKM08_RS09085;Dbxref=GenBank:WP_023349542.1;Name=WP_023349542.1;gbkey=CDS;gene=mazE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216459.1;locus_tag=DKM08_RS09085;product=type II toxin-antitoxin system antitoxin MazE5;protein_id=WP_023349542.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1856075 1856665 . - . ID=gene-DKM08_RS09090;Name=DKM08_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09090;old_locus_tag=DKM08_09080 NZ_QFYX01000001.1 Protein Homology CDS 1856075 1856665 . - 0 ID=cds-WP_003409784.1;Parent=gene-DKM08_RS09090;Dbxref=GenBank:WP_003409784.1;Name=WP_003409784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216460.1;locus_tag=DKM08_RS09090;product=SEC-C domain-containing protein;protein_id=WP_003409784.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1856720 1858084 . + . ID=gene-DKM08_RS09095;Name=DKM08_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09095;old_locus_tag=DKM08_09085 NZ_QFYX01000001.1 Protein Homology CDS 1856720 1858084 . + 0 ID=cds-WP_003910878.1;Parent=gene-DKM08_RS09095;Dbxref=GenBank:WP_003910878.1;Name=WP_003910878.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=DKM08_RS09095;product=HNH endonuclease signature motif containing protein;protein_id=WP_003910878.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1858239 1858691 . - . ID=gene-DKM08_RS09100;Name=lppG;gbkey=Gene;gene=lppG;gene_biotype=protein_coding;locus_tag=DKM08_RS09100;old_locus_tag=DKM08_09090 NZ_QFYX01000001.1 Protein Homology CDS 1858239 1858691 . - 0 ID=cds-WP_010950636.1;Parent=gene-DKM08_RS09100;Dbxref=GenBank:WP_010950636.1;Name=WP_010950636.1;gbkey=CDS;gene=lppG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216462.1;locus_tag=DKM08_RS09100;product=lipoprotein;protein_id=WP_010950636.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1858755 1859156 . + . ID=gene-DKM08_RS09105;Name=DKM08_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09105;old_locus_tag=DKM08_09095 NZ_QFYX01000001.1 Protein Homology CDS 1858755 1859156 . + 0 ID=cds-WP_003409869.1;Parent=gene-DKM08_RS09105;Dbxref=GenBank:WP_003409869.1;Name=WP_003409869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216463.1;locus_tag=DKM08_RS09105;product=hypothetical protein;protein_id=WP_003409869.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1859149 1859331 . - . ID=gene-DKM08_RS09110;Name=DKM08_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09110;old_locus_tag=DKM08_09100 NZ_QFYX01000001.1 Protein Homology CDS 1859149 1859331 . - 0 ID=cds-WP_003409870.1;Parent=gene-DKM08_RS09110;Dbxref=GenBank:WP_003409870.1;Name=WP_003409870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409870.1;locus_tag=DKM08_RS09110;product=hypothetical protein;protein_id=WP_003409870.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1859445 1859795 . - . ID=gene-DKM08_RS09115;Name=DKM08_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09115;old_locus_tag=DKM08_09105 NZ_QFYX01000001.1 Protein Homology CDS 1859445 1859795 . - 0 ID=cds-WP_003409871.1;Parent=gene-DKM08_RS09115;Dbxref=GenBank:WP_003409871.1;Name=WP_003409871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=DKM08_RS09115;product=hypothetical protein;protein_id=WP_003409871.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1859806 1860708 . - . ID=gene-DKM08_RS09120;Name=DKM08_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09120;old_locus_tag=DKM08_09110 NZ_QFYX01000001.1 Protein Homology CDS 1859806 1860708 . - 0 ID=cds-WP_003409874.1;Parent=gene-DKM08_RS09120;Dbxref=GenBank:WP_003409874.1;Name=WP_003409874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409874.1;locus_tag=DKM08_RS09120;product=hypothetical protein;protein_id=WP_003409874.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1860729 1860920 . - . ID=gene-DKM08_RS09125;Name=DKM08_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09125;old_locus_tag=DKM08_09115 NZ_QFYX01000001.1 Protein Homology CDS 1860729 1860920 . - 0 ID=cds-WP_003409876.1;Parent=gene-DKM08_RS09125;Dbxref=GenBank:WP_003409876.1;Name=WP_003409876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216466.1;locus_tag=DKM08_RS09125;product=hypothetical protein;protein_id=WP_003409876.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1860921 1861217 . - . ID=gene-DKM08_RS09130;Name=DKM08_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09130;old_locus_tag=DKM08_09120 NZ_QFYX01000001.1 Protein Homology CDS 1860921 1861217 . - 0 ID=cds-WP_003409877.1;Parent=gene-DKM08_RS09130;Dbxref=GenBank:WP_003409877.1;Name=WP_003409877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216467.1;locus_tag=DKM08_RS09130;product=hypothetical protein;protein_id=WP_003409877.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1861457 1861672 . + . ID=gene-DKM08_RS09135;Name=DKM08_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09135;old_locus_tag=DKM08_09125 NZ_QFYX01000001.1 Protein Homology CDS 1861457 1861672 . + 0 ID=cds-WP_003409878.1;Parent=gene-DKM08_RS09135;Dbxref=GenBank:WP_003409878.1;Name=WP_003409878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216468.1;locus_tag=DKM08_RS09135;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003409878.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1861669 1861980 . + . ID=gene-DKM08_RS09140;Name=DKM08_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09140;old_locus_tag=DKM08_09130 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 1861669 1861980 . + 0 ID=cds-WP_003409881.1;Parent=gene-DKM08_RS09140;Dbxref=GenBank:WP_003409881.1;Name=WP_003409881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS09140;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409881.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1861954 1862475 . - . ID=gene-DKM08_RS21600;Name=DKM08_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21600 NZ_QFYX01000001.1 Protein Homology CDS 1861954 1862475 . - 0 ID=cds-WP_010950637.1;Parent=gene-DKM08_RS21600;Dbxref=GenBank:WP_010950637.1;Name=WP_010950637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216470.1;locus_tag=DKM08_RS21600;product=hypothetical protein;protein_id=WP_010950637.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1862450 1862827 . + . ID=gene-DKM08_RS09150;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=DKM08_RS09150;old_locus_tag=DKM08_09140 NZ_QFYX01000001.1 Protein Homology CDS 1862450 1862827 . + 0 ID=cds-WP_010886136.1;Parent=gene-DKM08_RS09150;Dbxref=GenBank:WP_010886136.1;Name=WP_010886136.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216471.2;locus_tag=DKM08_RS09150;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_010886136.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1862869 1863318 . + . ID=gene-DKM08_RS09155;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=DKM08_RS09155;old_locus_tag=DKM08_09145 NZ_QFYX01000001.1 Protein Homology CDS 1862869 1863318 . + 0 ID=cds-WP_003409886.1;Parent=gene-DKM08_RS09155;Dbxref=GenBank:WP_003409886.1;Name=WP_003409886.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216472.1;locus_tag=DKM08_RS09155;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_003409886.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1863315 1863860 . + . ID=gene-DKM08_RS09160;Name=DKM08_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09160;old_locus_tag=DKM08_09150 NZ_QFYX01000001.1 Protein Homology CDS 1863315 1863860 . + 0 ID=cds-WP_003409891.1;Parent=gene-DKM08_RS09160;Dbxref=GenBank:WP_003409891.1;Name=WP_003409891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216473.1;locus_tag=DKM08_RS09160;product=SecB-like chaperone;protein_id=WP_003409891.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1863749 1864363 . - . ID=gene-DKM08_RS09165;Name=DKM08_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09165;old_locus_tag=DKM08_09155 NZ_QFYX01000001.1 Protein Homology CDS 1863749 1864363 . - 0 ID=cds-WP_003901296.1;Parent=gene-DKM08_RS09165;Dbxref=GenBank:WP_003901296.1;Name=WP_003901296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216474.1;locus_tag=DKM08_RS09165;product=hypothetical protein;protein_id=WP_003901296.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1864412 1864708 . - . ID=gene-DKM08_RS09170;Name=DKM08_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09170;old_locus_tag=DKM08_09160 NZ_QFYX01000001.1 Protein Homology CDS 1864412 1864708 . - 0 ID=cds-WP_003409896.1;Parent=gene-DKM08_RS09170;Dbxref=GenBank:WP_003409896.1;Name=WP_003409896.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216475.1;locus_tag=DKM08_RS09170;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003409896.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1864705 1864956 . - . ID=gene-DKM08_RS09175;Name=DKM08_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09175;old_locus_tag=DKM08_09165 NZ_QFYX01000001.1 Protein Homology CDS 1864705 1864956 . - 0 ID=cds-WP_003409899.1;Parent=gene-DKM08_RS09175;Dbxref=GenBank:WP_003409899.1;Name=WP_003409899.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216476.1;locus_tag=DKM08_RS09175;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_003409899.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1864943 1865437 . + . ID=gene-DKM08_RS09180;Name=DKM08_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09180;old_locus_tag=DKM08_09170 NZ_QFYX01000001.1 Protein Homology CDS 1864943 1865437 . + 0 ID=cds-WP_003899099.1;Parent=gene-DKM08_RS09180;Dbxref=GenBank:WP_003899099.1;Name=WP_003899099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216477.1;locus_tag=DKM08_RS09180;product=hypothetical protein;protein_id=WP_003899099.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1865597 1866004 . - . ID=gene-DKM08_RS09185;Name=DKM08_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09185;old_locus_tag=DKM08_09175 NZ_QFYX01000001.1 Protein Homology CDS 1865597 1866004 . - 0 ID=cds-WP_003409913.1;Parent=gene-DKM08_RS09185;Dbxref=GenBank:WP_003409913.1;Name=WP_003409913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216478.1;locus_tag=DKM08_RS09185;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409913.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1866008 1866280 . - . ID=gene-DKM08_RS09190;Name=DKM08_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09190;old_locus_tag=DKM08_09180 NZ_QFYX01000001.1 Protein Homology CDS 1866008 1866280 . - 0 ID=cds-WP_003899100.1;Parent=gene-DKM08_RS09190;Dbxref=GenBank:WP_003899100.1;Name=WP_003899100.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410641.1;locus_tag=DKM08_RS09190;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899100.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1866313 1867533 . - . ID=gene-DKM08_RS09195;Name=mce3R;gbkey=Gene;gene=mce3R;gene_biotype=protein_coding;locus_tag=DKM08_RS09195;old_locus_tag=DKM08_09185 NZ_QFYX01000001.1 Protein Homology CDS 1866313 1867533 . - 0 ID=cds-WP_003409919.1;Parent=gene-DKM08_RS09195;Dbxref=GenBank:WP_003409919.1;Name=WP_003409919.1;gbkey=CDS;gene=mce3R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216479.1;locus_tag=DKM08_RS09195;product=TetR family transcriptional regulator Mce3R;protein_id=WP_003409919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1868432 1868737 . + . ID=gene-DKM08_RS09210;Name=DKM08_RS09210;end_range=1868737,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS09210;old_locus_tag=DKM08_09200;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1868432 1868737 . + 0 ID=cds-DKM08_RS09210;Parent=gene-DKM08_RS09210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1868737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216480.1;locus_tag=DKM08_RS09210;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1868733 1868813 . + . ID=gene-DKM08_RS22110;Name=DKM08_RS22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22110;partial=true;pseudo=true;start_range=.,1868733 NZ_QFYX01000001.1 Protein Homology CDS 1868733 1868813 . + 0 ID=cds-DKM08_RS22110;Parent=gene-DKM08_RS22110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216493.1;locus_tag=DKM08_RS22110;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1868733;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1868921 1869769 . + . ID=gene-DKM08_RS09215;Name=DKM08_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09215;old_locus_tag=DKM08_09205 NZ_QFYX01000001.1 Protein Homology CDS 1868921 1869769 . + 0 ID=cds-WP_003409942.1;Parent=gene-DKM08_RS09215;Dbxref=GenBank:WP_003409942.1;Name=WP_003409942.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216494.1;locus_tag=DKM08_RS09215;product=class I SAM-dependent methyltransferase;protein_id=WP_003409942.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1869732 1871177 . - . ID=gene-DKM08_RS09220;Name=DKM08_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09220;old_locus_tag=DKM08_09210 NZ_QFYX01000001.1 Protein Homology CDS 1869732 1871177 . - 0 ID=cds-WP_003409946.1;Parent=gene-DKM08_RS09220;Dbxref=GenBank:WP_003409946.1;Name=WP_003409946.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216495.2;locus_tag=DKM08_RS09220;product=APC family permease;protein_id=WP_003409946.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1871356 1872042 . - . ID=gene-DKM08_RS09225;Name=mpt64;gbkey=Gene;gene=mpt64;gene_biotype=protein_coding;locus_tag=DKM08_RS09225;old_locus_tag=DKM08_09215 NZ_QFYX01000001.1 Protein Homology CDS 1871356 1872042 . - 0 ID=cds-WP_003409954.1;Parent=gene-DKM08_RS09225;Dbxref=GenBank:WP_003409954.1;Name=WP_003409954.1;gbkey=CDS;gene=mpt64;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216496.1;locus_tag=DKM08_RS09225;product=immunoprotective protein Mpt64;protein_id=WP_003409954.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1872233 1873201 . - . ID=gene-DKM08_RS09230;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=DKM08_RS09230;old_locus_tag=DKM08_09220 NZ_QFYX01000001.1 Protein Homology CDS 1872233 1873201 . - 0 ID=cds-WP_003409956.1;Parent=gene-DKM08_RS09230;Dbxref=GenBank:WP_003409956.1;Name=WP_003409956.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177853.1;locus_tag=DKM08_RS09230;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003409956.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1873426 1873845 . - . ID=gene-DKM08_RS09235;Name=DKM08_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09235;old_locus_tag=DKM08_09225 NZ_QFYX01000001.1 Protein Homology CDS 1873426 1873845 . - 0 ID=cds-WP_003409958.1;Parent=gene-DKM08_RS09235;Dbxref=GenBank:WP_003409958.1;Name=WP_003409958.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216498.1;locus_tag=DKM08_RS09235;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409958.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1873854 1874114 . - . ID=gene-DKM08_RS09240;Name=DKM08_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09240;old_locus_tag=DKM08_09230 NZ_QFYX01000001.1 Protein Homology CDS 1873854 1874114 . - 0 ID=cds-WP_003409968.1;Parent=gene-DKM08_RS09240;Dbxref=GenBank:WP_003409968.1;Name=WP_003409968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837054.1;locus_tag=DKM08_RS09240;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003409968.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1874257 1875933 . + . ID=gene-DKM08_RS09245;Name=DKM08_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09245;old_locus_tag=DKM08_09235 NZ_QFYX01000001.1 Protein Homology CDS 1874257 1875933 . + 0 ID=cds-WP_010950639.1;Parent=gene-DKM08_RS09245;Dbxref=GenBank:WP_010950639.1;Name=WP_010950639.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177854.1;locus_tag=DKM08_RS09245;product=PecA family PE domain-processing aspartic protease;protein_id=WP_010950639.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1875921 1876574 . - . ID=gene-DKM08_RS09250;Name=cfp21;gbkey=Gene;gene=cfp21;gene_biotype=protein_coding;locus_tag=DKM08_RS09250;old_locus_tag=DKM08_09240 NZ_QFYX01000001.1 Protein Homology CDS 1875921 1876574 . - 0 ID=cds-WP_003409976.1;Parent=gene-DKM08_RS09250;Dbxref=GenBank:WP_003409976.1;Name=WP_003409976.1;gbkey=CDS;gene=cfp21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216500.1;locus_tag=DKM08_RS09250;product=cutinase Cfp21;protein_id=WP_003409976.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1876689 1876919 . + . ID=gene-DKM08_RS09255;Name=DKM08_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09255;old_locus_tag=DKM08_09245 NZ_QFYX01000001.1 Protein Homology CDS 1876689 1876919 . + 0 ID=cds-WP_003409980.1;Parent=gene-DKM08_RS09255;Dbxref=GenBank:WP_003409980.1;Name=WP_003409980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012394608.1;locus_tag=DKM08_RS09255;product=DUF167 domain-containing protein;protein_id=WP_003409980.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1877004 1877915 . - . ID=gene-DKM08_RS09260;Name=DKM08_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09260;old_locus_tag=DKM08_09250 NZ_QFYX01000001.1 Protein Homology CDS 1877004 1877915 . - 0 ID=cds-WP_003409986.1;Parent=gene-DKM08_RS09260;Dbxref=GenBank:WP_003409986.1;Name=WP_003409986.1;Ontology_term=GO:0006351,GO:0008156,GO:0043200,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,negative regulation of DNA replication|0008156||IEA,response to amino acid|0043200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216501.1;locus_tag=DKM08_RS09260;product=ArgP/LysG family DNA-binding transcriptional regulator;protein_id=WP_003409986.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1878024 1878623 . + . ID=gene-DKM08_RS09265;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=DKM08_RS09265;old_locus_tag=DKM08_09255 NZ_QFYX01000001.1 Protein Homology CDS 1878024 1878623 . + 0 ID=cds-WP_003409989.1;Parent=gene-DKM08_RS09265;Dbxref=GenBank:WP_003409989.1;Name=WP_003409989.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216502.1;locus_tag=DKM08_RS09265;product=L-lysine exporter;protein_id=WP_003409989.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1879039 1879467 . + . ID=gene-DKM08_RS09270;Name=DKM08_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09270;old_locus_tag=DKM08_09260 NZ_QFYX01000001.1 Protein Homology CDS 1879039 1879467 . + 0 ID=cds-WP_003409992.1;Parent=gene-DKM08_RS09270;Dbxref=GenBank:WP_003409992.1;Name=WP_003409992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216503.1;locus_tag=DKM08_RS09270;product=cellulose-binding protein;protein_id=WP_003409992.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1879693 1880232 . + . ID=gene-DKM08_RS09275;Name=erm(37);gbkey=Gene;gene=erm(37);gene_biotype=protein_coding;locus_tag=DKM08_RS09275;old_locus_tag=DKM08_09265 NZ_QFYX01000001.1 Protein Homology CDS 1879693 1880232 . + 0 ID=cds-WP_003900446.1;Parent=gene-DKM08_RS09275;Dbxref=GenBank:WP_003900446.1;Name=WP_003900446.1;gbkey=CDS;gene=erm(37);inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900446.1;locus_tag=DKM08_RS09275;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37);protein_id=WP_003900446.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1880412 1880684 . + . ID=gene-DKM08_RS22520;Name=DKM08_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22520;old_locus_tag=DKM08_09270 NZ_QFYX01000001.1 Protein Homology CDS 1880412 1880684 . + 0 ID=cds-WP_003409997.1;Parent=gene-DKM08_RS22520;Dbxref=GenBank:WP_003409997.1;Name=WP_003409997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.6;locus_tag=DKM08_RS22520;product=PIN domain-containing protein;protein_id=WP_003409997.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1880752 1881312 . - . ID=gene-DKM08_RS09285;Name=DKM08_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09285;old_locus_tag=DKM08_09275 NZ_QFYX01000001.1 Protein Homology CDS 1880752 1881312 . - 0 ID=cds-WP_003410001.1;Parent=gene-DKM08_RS09285;Dbxref=GenBank:WP_003410001.1;Name=WP_003410001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216505.1;locus_tag=DKM08_RS09285;product=RES family NAD+ phosphorylase;protein_id=WP_003410001.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1881309 1881650 . - . ID=gene-DKM08_RS09290;Name=DKM08_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09290;old_locus_tag=DKM08_09280 NZ_QFYX01000001.1 Protein Homology CDS 1881309 1881650 . - 0 ID=cds-WP_003410003.1;Parent=gene-DKM08_RS09290;Dbxref=GenBank:WP_003410003.1;Name=WP_003410003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216506.1;locus_tag=DKM08_RS09290;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003410003.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1881736 1881993 . + . ID=gene-DKM08_RS09295;Name=DKM08_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09295;old_locus_tag=DKM08_09285 NZ_QFYX01000001.1 Protein Homology CDS 1881736 1881993 . + 0 ID=cds-WP_003410006.1;Parent=gene-DKM08_RS09295;Dbxref=GenBank:WP_003410006.1;Name=WP_003410006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917558.1;locus_tag=DKM08_RS09295;product=hypothetical protein;protein_id=WP_003410006.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1882142 1882229 . - . ID=gene-DKM08_RS22710;Name=DKM08_RS22710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22710;partial=true;pseudo=true;start_range=.,1882142 NZ_QFYX01000001.1 Protein Homology CDS 1882142 1882229 . - 0 ID=cds-DKM08_RS22710;Parent=gene-DKM08_RS22710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191102.1;locus_tag=DKM08_RS22710;partial=true;product=dehydrogenase;pseudo=true;start_range=.,1882142;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1882318 1882662 . - . ID=gene-DKM08_RS09305;Name=mazF6;gbkey=Gene;gene=mazF6;gene_biotype=protein_coding;gene_synonym=mazF-mt3;locus_tag=DKM08_RS09305;old_locus_tag=DKM08_09295 NZ_QFYX01000001.1 Protein Homology CDS 1882318 1882662 . - 0 ID=cds-WP_003410010.1;Parent=gene-DKM08_RS09305;Dbxref=GenBank:WP_003410010.1;Name=WP_003410010.1;gbkey=CDS;gene=mazF6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216507.1;locus_tag=DKM08_RS09305;product=type II toxin-antitoxin system toxin endoribonuclease MazF6;protein_id=WP_003410010.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1882656 1882904 . - . ID=gene-DKM08_RS09310;Name=DKM08_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09310;old_locus_tag=DKM08_09300 NZ_QFYX01000001.1 Protein Homology CDS 1882656 1882904 . - 0 ID=cds-WP_003410014.1;Parent=gene-DKM08_RS09310;Dbxref=GenBank:WP_003410014.1;Name=WP_003410014.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410673.1;locus_tag=DKM08_RS09310;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003410014.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1883004 1885319 . - . ID=gene-DKM08_RS09315;Name=ctpG;gbkey=Gene;gene=ctpG;gene_biotype=protein_coding;locus_tag=DKM08_RS09315;old_locus_tag=DKM08_09305 NZ_QFYX01000001.1 Protein Homology CDS 1883004 1885319 . - 0 ID=cds-WP_003899120.1;Parent=gene-DKM08_RS09315;Dbxref=GenBank:WP_003899120.1;Name=WP_003899120.1;gbkey=CDS;gene=ctpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216508.1;locus_tag=DKM08_RS09315;product=cation transporter ATPase CptG;protein_id=WP_003899120.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1885316 1885588 . - . ID=gene-DKM08_RS09320;Name=DKM08_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09320;old_locus_tag=DKM08_09310 NZ_QFYX01000001.1 Protein Homology CDS 1885316 1885588 . - 0 ID=cds-WP_003410017.1;Parent=gene-DKM08_RS09320;Dbxref=GenBank:WP_003410017.1;Name=WP_003410017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216509.1;locus_tag=DKM08_RS09320;product=DUF1490 family protein;protein_id=WP_003410017.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1885641 1885997 . - . ID=gene-DKM08_RS09325;Name=cmtR;gbkey=Gene;gene=cmtR;gene_biotype=protein_coding;locus_tag=DKM08_RS09325;old_locus_tag=DKM08_09315 NZ_QFYX01000001.1 Protein Homology CDS 1885641 1885997 . - 0 ID=cds-WP_003410018.1;Parent=gene-DKM08_RS09325;Dbxref=GenBank:WP_003410018.1;Name=WP_003410018.1;Ontology_term=GO:0006355,GO:0010288,GO:0046686,GO:0003700,GO:0032791,GO:0046870,GO:0097063;gbkey=CDS;gene=cmtR;go_function=DNA-binding transcription factor activity|0003700||IEA,lead ion binding|0032791||IEA,cadmium ion binding|0046870||IEA,cadmium ion sensor activity|0097063||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to lead ion|0010288||IEA,response to cadmium ion|0046686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216510.1;locus_tag=DKM08_RS09325;product=Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR;protein_id=WP_003410018.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1886154 1886921 . + . ID=gene-DKM08_RS09330;Name=DKM08_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09330;old_locus_tag=DKM08_09320 NZ_QFYX01000001.1 Protein Homology CDS 1886154 1886921 . + 0 ID=cds-WP_003410019.1;Parent=gene-DKM08_RS09330;Dbxref=GenBank:WP_003410019.1;Name=WP_003410019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216511.1;locus_tag=DKM08_RS09330;product=hemerythrin domain-containing protein;protein_id=WP_003410019.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1887017 1887970 . + . ID=gene-DKM08_RS09335;Name=DKM08_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09335;old_locus_tag=DKM08_09325 NZ_QFYX01000001.1 Protein Homology CDS 1887017 1887970 . + 0 ID=cds-WP_003899121.1;Parent=gene-DKM08_RS09335;Dbxref=GenBank:WP_003899121.1;Name=WP_003899121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216512.1;locus_tag=DKM08_RS09335;product=universal stress protein;protein_id=WP_003899121.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1888172 1890889 . + . ID=gene-DKM08_RS09340;Name=ctpF;gbkey=Gene;gene=ctpF;gene_biotype=protein_coding;locus_tag=DKM08_RS09340;old_locus_tag=DKM08_09330 NZ_QFYX01000001.1 Protein Homology CDS 1888172 1890889 . + 0 ID=cds-WP_003410027.1;Parent=gene-DKM08_RS09340;Dbxref=GenBank:WP_003410027.1;Name=WP_003410027.1;gbkey=CDS;gene=ctpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216513.1;locus_tag=DKM08_RS09340;product=cation-transporting P-type ATPase;protein_id=WP_003410027.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1890958 1891734 . - . ID=gene-DKM08_RS09345;Name=DKM08_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09345;old_locus_tag=DKM08_09335 NZ_QFYX01000001.1 Protein Homology CDS 1890958 1891734 . - 0 ID=cds-WP_003410037.1;Parent=gene-DKM08_RS09345;Dbxref=GenBank:WP_003410037.1;Name=WP_003410037.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216514.1;locus_tag=DKM08_RS09345;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_003410037.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1891829 1893151 . - . ID=gene-DKM08_RS09350;Name=DKM08_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09350;old_locus_tag=DKM08_09340 NZ_QFYX01000001.1 Protein Homology CDS 1891829 1893151 . - 0 ID=cds-WP_003410039.1;Parent=gene-DKM08_RS09350;Dbxref=GenBank:WP_003410039.1;Name=WP_003410039.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216515.1;locus_tag=DKM08_RS09350;product=APC family permease;protein_id=WP_003410039.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1893222 1894835 . + . ID=gene-DKM08_RS09355;Name=DKM08_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09355;old_locus_tag=DKM08_09345 NZ_QFYX01000001.1 Protein Homology CDS 1893222 1894835 . + 0 ID=cds-WP_003410042.1;Parent=gene-DKM08_RS09355;Dbxref=GenBank:WP_003410042.1;Name=WP_003410042.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216516.1;locus_tag=DKM08_RS09355;product=NAD(P)-binding protein;protein_id=WP_003410042.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1894845 1895597 . + . ID=gene-DKM08_RS09360;Name=DKM08_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09360;old_locus_tag=DKM08_09350 NZ_QFYX01000001.1 Protein Homology CDS 1894845 1895597 . + 0 ID=cds-WP_010950640.1;Parent=gene-DKM08_RS09360;Dbxref=GenBank:WP_010950640.1;Name=WP_010950640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216517.1;locus_tag=DKM08_RS09360;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_010950640.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1895673 1896455 . + . ID=gene-DKM08_RS09365;Name=DKM08_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09365;old_locus_tag=DKM08_09355 NZ_QFYX01000001.1 Protein Homology CDS 1895673 1896455 . + 0 ID=cds-WP_003410047.1;Parent=gene-DKM08_RS09365;Dbxref=GenBank:WP_003410047.1;Name=WP_003410047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216518.1;locus_tag=DKM08_RS09365;product=SDR family oxidoreductase;protein_id=WP_003410047.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1896576 1897265 . - . ID=gene-DKM08_RS09370;Name=DKM08_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09370;old_locus_tag=DKM08_09360 NZ_QFYX01000001.1 Protein Homology CDS 1896576 1897265 . - 0 ID=cds-WP_003899125.1;Parent=gene-DKM08_RS09370;Dbxref=GenBank:WP_003899125.1;Name=WP_003899125.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899125.1;locus_tag=DKM08_RS09370;product=class I SAM-dependent methyltransferase;protein_id=WP_003899125.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1897273 1897470 . - . ID=gene-DKM08_RS21605;Name=DKM08_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21605 NZ_QFYX01000001.1 Protein Homology CDS 1897273 1897470 . - 0 ID=cds-WP_003410051.1;Parent=gene-DKM08_RS21605;Dbxref=GenBank:WP_003410051.1;Name=WP_003410051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410051.1;locus_tag=DKM08_RS21605;product=phosphoenolpyruvate synthase;protein_id=WP_003410051.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1897491 1898987 . - . ID=gene-DKM08_RS09375;Name=DKM08_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09375;old_locus_tag=DKM08_09365 NZ_QFYX01000001.1 Protein Homology CDS 1897491 1898987 . - 0 ID=cds-WP_003410057.1;Parent=gene-DKM08_RS09375;Dbxref=GenBank:WP_003410057.1;Name=WP_003410057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216520.1;locus_tag=DKM08_RS09375;product=AAA family ATPase;protein_id=WP_003410057.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1899009 1899896 . - . ID=gene-DKM08_RS09380;Name=DKM08_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09380;old_locus_tag=DKM08_09370 NZ_QFYX01000001.1 Protein Homology CDS 1899009 1899896 . - 0 ID=cds-WP_003410060.1;Parent=gene-DKM08_RS09380;Dbxref=GenBank:WP_003410060.1;Name=WP_003410060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216521.1;locus_tag=DKM08_RS09380;product=universal stress protein;protein_id=WP_003410060.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1900015 1903998 . + . ID=gene-DKM08_RS09385;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=DKM08_RS09385;old_locus_tag=DKM08_09375 NZ_QFYX01000001.1 Protein Homology CDS 1900015 1903998 . + 0 ID=cds-WP_011799236.1;Parent=gene-DKM08_RS09385;Dbxref=GenBank:WP_011799236.1;Name=WP_011799236.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177855.1;locus_tag=DKM08_RS09385;product=trehalose-phosphatase;protein_id=WP_011799236.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1904097 1904441 . - . ID=gene-DKM08_RS09390;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=DKM08_RS09390;old_locus_tag=DKM08_09380 NZ_QFYX01000001.1 Protein Homology CDS 1904097 1904441 . - 0 ID=cds-WP_003410065.1;Parent=gene-DKM08_RS09390;Dbxref=GenBank:WP_003410065.1;Name=WP_003410065.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216523.1;locus_tag=DKM08_RS09390;product=ferredoxin;protein_id=WP_003410065.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1904630 1905799 . - . ID=gene-DKM08_RS09395;Name=DKM08_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09395;old_locus_tag=DKM08_09385 NZ_QFYX01000001.1 Protein Homology CDS 1904630 1905799 . - 0 ID=cds-WP_003899126.1;Parent=gene-DKM08_RS09395;Dbxref=GenBank:WP_003899126.1;Name=WP_003899126.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899126.1;locus_tag=DKM08_RS09395;product=ATP-binding protein;protein_id=WP_003899126.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1906058 1906285 . + . ID=gene-DKM08_RS09400;Name=DKM08_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09400;old_locus_tag=DKM08_09390 NZ_QFYX01000001.1 Protein Homology CDS 1906058 1906285 . + 0 ID=cds-WP_019283586.1;Parent=gene-DKM08_RS09400;Dbxref=GenBank:WP_019283586.1;Name=WP_019283586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283586.1;locus_tag=DKM08_RS09400;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_019283586.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1906286 1906684 . + . ID=gene-DKM08_RS09405;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=DKM08_RS09405;old_locus_tag=DKM08_09395 NZ_QFYX01000001.1 Protein Homology CDS 1906286 1906684 . + 0 ID=cds-WP_003410075.1;Parent=gene-DKM08_RS09405;Dbxref=GenBank:WP_003410075.1;Name=WP_003410075.1;Ontology_term=GO:0004518,GO:0110001;gbkey=CDS;gene=vapC;go_component=toxin-antitoxin complex|0110001||IEA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216526.1;locus_tag=DKM08_RS09405;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003410075.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1906867 1907298 . - . ID=gene-DKM08_RS09410;Name=DKM08_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09410;old_locus_tag=DKM08_09400 NZ_QFYX01000001.1 Protein Homology CDS 1906867 1907298 . - 0 ID=cds-WP_003410078.1;Parent=gene-DKM08_RS09410;Dbxref=GenBank:WP_003410078.1;Name=WP_003410078.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216527.1;locus_tag=DKM08_RS09410;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003410078.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1907399 1907833 . + . ID=gene-DKM08_RS09415;Name=DKM08_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09415;old_locus_tag=DKM08_09405 NZ_QFYX01000001.1 Protein Homology CDS 1907399 1907833 . + 0 ID=cds-WP_003914358.1;Parent=gene-DKM08_RS09415;Dbxref=GenBank:WP_003914358.1;Name=WP_003914358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914358.1;locus_tag=DKM08_RS09415;product=DUF1398 domain-containing protein;protein_id=WP_003914358.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1907969 1908228 . - . ID=gene-DKM08_RS22715;Name=DKM08_RS22715;end_range=1908228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22715;old_locus_tag=DKM08_09415;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1907969 1908228 . - 0 ID=cds-DKM08_RS22715;Parent=gene-DKM08_RS22715;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1908228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=DKM08_RS22715;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1908270 1908452 . - . ID=gene-DKM08_RS09430;Name=DKM08_RS09430;end_range=1908452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS09430;old_locus_tag=DKM08_09420;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1908270 1908452 . - 0 ID=cds-DKM08_RS09430;Parent=gene-DKM08_RS09430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1908452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=DKM08_RS09430;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1908474 1909701 . + . ID=gene-DKM08_RS22720;Name=DKM08_RS22720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22720;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1908474 1909701 . + 0 ID=cds-DKM08_RS22720;Parent=gene-DKM08_RS22720;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007168642.1;locus_tag=DKM08_RS22720;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1909829 1911085 . - . ID=gene-DKM08_RS09445;Name=DKM08_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09445;old_locus_tag=DKM08_09435 NZ_QFYX01000001.1 Protein Homology CDS 1909829 1911085 . - 0 ID=cds-WP_023349530.1-2;Parent=gene-DKM08_RS09445;Dbxref=GenBank:WP_023349530.1;Name=WP_023349530.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=DKM08_RS09445;product=HNH endonuclease signature motif containing protein;protein_id=WP_023349530.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1911439 1912014 . + . ID=gene-DKM08_RS09455;Name=DKM08_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09455;old_locus_tag=DKM08_09445 NZ_QFYX01000001.1 Protein Homology CDS 1911439 1912014 . + 0 ID=cds-WP_003410100.1;Parent=gene-DKM08_RS09455;Dbxref=GenBank:WP_003410100.1;Name=WP_003410100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216532.1;locus_tag=DKM08_RS09455;product=hypothetical protein;protein_id=WP_003410100.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1912011 1913051 . + . ID=gene-DKM08_RS09460;Name=DKM08_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09460;old_locus_tag=DKM08_09450 NZ_QFYX01000001.1 Protein Homology CDS 1912011 1913051 . + 0 ID=cds-WP_003410103.1;Parent=gene-DKM08_RS09460;Dbxref=GenBank:WP_003410103.1;Name=WP_003410103.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216533.1;locus_tag=DKM08_RS09460;product=helix-turn-helix domain-containing protein;protein_id=WP_003410103.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1913293 1914012 . + . ID=gene-DKM08_RS09465;Name=DKM08_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09465;old_locus_tag=DKM08_09455 NZ_QFYX01000001.1 Protein Homology CDS 1913293 1914012 . + 0 ID=cds-WP_010950643.1;Parent=gene-DKM08_RS09465;Dbxref=GenBank:WP_010950643.1;Name=WP_010950643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216534.1;locus_tag=DKM08_RS09465;product=DUF433 domain-containing protein;protein_id=WP_010950643.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1914002 1914418 . + . ID=gene-DKM08_RS09470;Name=DKM08_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09470;old_locus_tag=DKM08_09460 NZ_QFYX01000001.1 Protein Homology CDS 1914002 1914418 . + 0 ID=cds-WP_003410114.1;Parent=gene-DKM08_RS09470;Dbxref=GenBank:WP_003410114.1;Name=WP_003410114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216535.1;locus_tag=DKM08_RS09470;product=hypothetical protein;protein_id=WP_003410114.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1914434 1914733 . - . ID=gene-DKM08_RS09475;Name=DKM08_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09475;old_locus_tag=DKM08_09465 NZ_QFYX01000001.1 Protein Homology CDS 1914434 1914733 . - 0 ID=cds-WP_003410120.1;Parent=gene-DKM08_RS09475;Dbxref=GenBank:WP_003410120.1;Name=WP_003410120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410120.1;locus_tag=DKM08_RS09475;product=type ISP restriction/modification enzyme;protein_id=WP_003410120.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1914818 1915123 . - . ID=gene-DKM08_RS09480;Name=DKM08_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09480;old_locus_tag=DKM08_09470 NZ_QFYX01000001.1 Protein Homology CDS 1914818 1915123 . - 0 ID=cds-WP_003410124.1;Parent=gene-DKM08_RS09480;Dbxref=GenBank:WP_003410124.1;Name=WP_003410124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216537.1;locus_tag=DKM08_RS09480;product=helix-turn-helix domain-containing protein;protein_id=WP_003410124.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1915132 1915737 . - . ID=gene-DKM08_RS09485;Name=DKM08_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09485;old_locus_tag=DKM08_09475 NZ_QFYX01000001.1 Protein Homology CDS 1915132 1915737 . - 0 ID=cds-WP_003900449.1;Parent=gene-DKM08_RS09485;Dbxref=GenBank:WP_003900449.1;Name=WP_003900449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216538.1;locus_tag=DKM08_RS09485;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003900449.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1915900 1916178 . - . ID=gene-DKM08_RS22725;Name=DKM08_RS22725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22725;partial=true;pseudo=true;start_range=.,1915900 NZ_QFYX01000001.1 Protein Homology CDS 1915900 1916178 . - 0 ID=cds-DKM08_RS22725;Parent=gene-DKM08_RS22725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_374101691.1;locus_tag=DKM08_RS22725;partial=true;product=IS1380 family transposase;pseudo=true;start_range=.,1915900;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1916281 1916958 . - . ID=gene-DKM08_RS09495;Name=DKM08_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09495;old_locus_tag=DKM08_09485 NZ_QFYX01000001.1 Protein Homology CDS 1916281 1916958 . - 0 ID=cds-WP_003900450.1;Parent=gene-DKM08_RS09495;Dbxref=GenBank:WP_003900450.1;Name=WP_003900450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904758.1;locus_tag=DKM08_RS09495;product=hypothetical protein;protein_id=WP_003900450.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1916910 1917146 . - . ID=gene-DKM08_RS09500;Name=DKM08_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09500;old_locus_tag=DKM08_09490 NZ_QFYX01000001.1 Protein Homology CDS 1916910 1917146 . - 0 ID=cds-WP_003410133.1;Parent=gene-DKM08_RS09500;Dbxref=GenBank:WP_003410133.1;Name=WP_003410133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410133.1;locus_tag=DKM08_RS09500;product=hypothetical protein;protein_id=WP_003410133.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1917353 1918249 . - . ID=gene-DKM08_RS09505;Name=DKM08_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09505;old_locus_tag=DKM08_09495 NZ_QFYX01000001.1 Protein Homology CDS 1917353 1918249 . - 0 ID=cds-WP_003410136.1;Parent=gene-DKM08_RS09505;Dbxref=GenBank:WP_003410136.1;Name=WP_003410136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917565.1;locus_tag=DKM08_RS09505;product=hypothetical protein;protein_id=WP_003410136.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1918433 1923253 . - . ID=gene-DKM08_RS09510;Name=DKM08_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09510;old_locus_tag=DKM08_09500 NZ_QFYX01000001.1 Protein Homology CDS 1918433 1923253 . - 0 ID=cds-WP_011799239.1;Parent=gene-DKM08_RS09510;Dbxref=GenBank:WP_011799239.1;Name=WP_011799239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=DKM08_RS09510;product=DEAD/DEAH box helicase;protein_id=WP_011799239.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1923556 1923789 . + . ID=gene-DKM08_RS22730;Name=DKM08_RS22730;end_range=1923789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22730;partial=true;pseudo=true;start_range=.,1923556 NZ_QFYX01000001.1 Protein Homology CDS 1923556 1923789 . + 0 ID=cds-DKM08_RS22730;Parent=gene-DKM08_RS22730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1923789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611777.1;locus_tag=DKM08_RS22730;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1923556;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1923763 1924761 . - . ID=gene-DKM08_RS09515;Name=DKM08_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09515;old_locus_tag=DKM08_09505 NZ_QFYX01000001.1 Protein Homology CDS 1923763 1924761 . - 0 ID=cds-WP_003410146.1;Parent=gene-DKM08_RS09515;Dbxref=GenBank:WP_003410146.1;Name=WP_003410146.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216541.1;locus_tag=DKM08_RS09515;product=cation diffusion facilitator family transporter;protein_id=WP_003410146.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1924876 1925760 . - . ID=gene-DKM08_RS09520;Name=DKM08_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09520;old_locus_tag=DKM08_09510 NZ_QFYX01000001.1 Protein Homology CDS 1924876 1925760 . - 0 ID=cds-WP_003410150.1;Parent=gene-DKM08_RS09520;Dbxref=GenBank:WP_003410150.1;Name=WP_003410150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216542.1;locus_tag=DKM08_RS09520;product=universal stress protein;protein_id=WP_003410150.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1925800 1927521 . - . ID=gene-DKM08_RS09525;Name=dosT;gbkey=Gene;gene=dosT;gene_biotype=protein_coding;locus_tag=DKM08_RS09525;old_locus_tag=DKM08_09515 NZ_QFYX01000001.1 Protein Homology CDS 1925800 1927521 . - 0 ID=cds-WP_003410152.1;Parent=gene-DKM08_RS09525;Dbxref=GenBank:WP_003410152.1;Name=WP_003410152.1;gbkey=CDS;gene=dosT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216543.1;locus_tag=DKM08_RS09525;product=two-component system sensor histidine kinase DosT;protein_id=WP_003410152.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1927582 1928421 . - . ID=gene-DKM08_RS09530;Name=DKM08_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09530;old_locus_tag=DKM08_09520 NZ_QFYX01000001.1 Protein Homology CDS 1927582 1928421 . - 0 ID=cds-WP_003410171.1;Parent=gene-DKM08_RS09530;Dbxref=GenBank:WP_003410171.1;Name=WP_003410171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216544.1;locus_tag=DKM08_RS09530;product=universal stress protein;protein_id=WP_003410171.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1928418 1929437 . - . ID=gene-DKM08_RS09535;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=DKM08_RS09535;old_locus_tag=DKM08_09525 NZ_QFYX01000001.1 Protein Homology CDS 1928418 1929437 . - 0 ID=cds-WP_003899139.1;Parent=gene-DKM08_RS09535;Dbxref=GenBank:WP_003899139.1;Name=WP_003899139.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;gene=pfkB;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216545.1;locus_tag=DKM08_RS09535;product=1-phosphofructokinase family hexose kinase;protein_id=WP_003899139.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1929454 1931499 . - . ID=gene-DKM08_RS09540;Name=DKM08_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09540;old_locus_tag=DKM08_09530 NZ_QFYX01000001.1 Protein Homology CDS 1929454 1931499 . - 0 ID=cds-WP_003410178.1;Parent=gene-DKM08_RS09540;Dbxref=GenBank:WP_003410178.1;Name=WP_003410178.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216546.1;locus_tag=DKM08_RS09540;product=erythromycin esterase family protein;protein_id=WP_003410178.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1931511 1931945 . - . ID=gene-DKM08_RS09545;Name=hspX;gbkey=Gene;gene=hspX;gene_biotype=protein_coding;gene_synonym=acr;locus_tag=DKM08_RS09545;old_locus_tag=DKM08_09535 NZ_QFYX01000001.1 Protein Homology CDS 1931511 1931945 . - 0 ID=cds-WP_003410189.1;Parent=gene-DKM08_RS09545;Dbxref=GenBank:WP_003410189.1;Name=WP_003410189.1;gbkey=CDS;gene=hspX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216547.1;locus_tag=DKM08_RS09545;product=alpha-crystallin HspX;protein_id=WP_003410189.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1932142 1933137 . + . ID=gene-DKM08_RS09550;Name=acg;gbkey=Gene;gene=acg;gene_biotype=protein_coding;locus_tag=DKM08_RS09550;old_locus_tag=DKM08_09540 NZ_QFYX01000001.1 Protein Homology CDS 1932142 1933137 . + 0 ID=cds-WP_010950647.1;Parent=gene-DKM08_RS09550;Dbxref=GenBank:WP_010950647.1;Name=WP_010950647.1;gbkey=CDS;gene=acg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216548.1;locus_tag=DKM08_RS09550;product=FMN-binding protein Acg;protein_id=WP_010950647.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1933253 1934095 . - . ID=gene-DKM08_RS09555;Name=DKM08_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09555;old_locus_tag=DKM08_09545 NZ_QFYX01000001.1 Protein Homology CDS 1933253 1934095 . - 0 ID=cds-WP_003410196.1;Parent=gene-DKM08_RS09555;Dbxref=GenBank:WP_003410196.1;Name=WP_003410196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216549.1;locus_tag=DKM08_RS09555;product=DUF3097 domain-containing protein;protein_id=WP_003410196.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1934307 1934630 . + . ID=gene-DKM08_RS09560;Name=DKM08_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09560;old_locus_tag=DKM08_09550 NZ_QFYX01000001.1 Protein Homology CDS 1934307 1934630 . + 0 ID=cds-WP_003410200.1;Parent=gene-DKM08_RS09560;Dbxref=GenBank:WP_003410200.1;Name=WP_003410200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216550.1;locus_tag=DKM08_RS09560;product=ArsR/SmtB family transcription factor;protein_id=WP_003410200.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1934627 1935115 . + . ID=gene-DKM08_RS09565;Name=DKM08_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09565;old_locus_tag=DKM08_09555 NZ_QFYX01000001.1 Protein Homology CDS 1934627 1935115 . + 0 ID=cds-WP_003899141.1;Parent=gene-DKM08_RS09565;Dbxref=GenBank:WP_003899141.1;Name=WP_003899141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216551.1;locus_tag=DKM08_RS09565;product=SRPBCC family protein;protein_id=WP_003899141.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1935112 1935753 . + . ID=gene-DKM08_RS09570;Name=DKM08_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09570;old_locus_tag=DKM08_09560 NZ_QFYX01000001.1 Protein Homology CDS 1935112 1935753 . + 0 ID=cds-WP_003410207.1;Parent=gene-DKM08_RS09570;Dbxref=GenBank:WP_003410207.1;Name=WP_003410207.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216552.1;locus_tag=DKM08_RS09570;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003410207.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1935760 1936734 . - . ID=gene-DKM08_RS09575;Name=DKM08_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09575;old_locus_tag=DKM08_09565 NZ_QFYX01000001.1 Protein Homology CDS 1935760 1936734 . - 0 ID=cds-WP_023349545.1;Parent=gene-DKM08_RS09575;Dbxref=GenBank:WP_023349545.1;Name=WP_023349545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216553.1;locus_tag=DKM08_RS09575;product=patatin-like phospholipase family protein;protein_id=WP_023349545.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1936736 1937809 . - . ID=gene-DKM08_RS09580;Name=DKM08_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09580;old_locus_tag=DKM08_09570 NZ_QFYX01000001.1 Protein Homology CDS 1936736 1937809 . - 0 ID=cds-WP_003410218.1;Parent=gene-DKM08_RS09580;Dbxref=GenBank:WP_003410218.1;Name=WP_003410218.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216554.1;locus_tag=DKM08_RS09580;product=ABC transporter ATP-binding protein;protein_id=WP_003410218.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1937812 1938654 . - . ID=gene-DKM08_RS09585;Name=DKM08_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09585;old_locus_tag=DKM08_09575 NZ_QFYX01000001.1 Protein Homology CDS 1937812 1938654 . - 0 ID=cds-WP_003410221.1;Parent=gene-DKM08_RS09585;Dbxref=GenBank:WP_003410221.1;Name=WP_003410221.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216555.1;locus_tag=DKM08_RS09585;product=carbohydrate ABC transporter permease;protein_id=WP_003410221.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1938641 1939543 . - . ID=gene-DKM08_RS09590;Name=DKM08_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09590;old_locus_tag=DKM08_09580 NZ_QFYX01000001.1 Protein Homology CDS 1938641 1939543 . - 0 ID=cds-WP_003410224.1;Parent=gene-DKM08_RS09590;Dbxref=GenBank:WP_003410224.1;Name=WP_003410224.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216556.1;locus_tag=DKM08_RS09590;product=carbohydrate ABC transporter permease;protein_id=WP_003410224.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1939540 1940859 . - . ID=gene-DKM08_RS09595;Name=DKM08_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09595;old_locus_tag=DKM08_09585 NZ_QFYX01000001.1 Protein Homology CDS 1939540 1940859 . - 0 ID=cds-WP_010950648.1;Parent=gene-DKM08_RS09595;Dbxref=GenBank:WP_010950648.1;Name=WP_010950648.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216557.1;locus_tag=DKM08_RS09595;product=ABC transporter substrate-binding protein;protein_id=WP_010950648.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1940897 1941694 . - . ID=gene-DKM08_RS09600;Name=DKM08_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09600;old_locus_tag=DKM08_09590 NZ_QFYX01000001.1 Protein Homology CDS 1940897 1941694 . - 0 ID=cds-WP_003899143.1;Parent=gene-DKM08_RS09600;Dbxref=GenBank:WP_003899143.1;Name=WP_003899143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216558.1;locus_tag=DKM08_RS09600;product=ketosteroid isomerase family protein;protein_id=WP_003899143.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1941694 1942254 . - . ID=gene-DKM08_RS09605;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=DKM08_RS09605;old_locus_tag=DKM08_09595 NZ_QFYX01000001.1 Protein Homology CDS 1941694 1942254 . - 0 ID=cds-WP_010950649.1;Parent=gene-DKM08_RS09605;Dbxref=GenBank:WP_010950649.1;Name=WP_010950649.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216559.1;locus_tag=DKM08_RS09605;product=pyrazinamidase PncA;protein_id=WP_010950649.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1942295 1942645 . - . ID=gene-DKM08_RS09610;Name=DKM08_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09610;old_locus_tag=DKM08_09600 NZ_QFYX01000001.1 Protein Homology CDS 1942295 1942645 . - 0 ID=cds-WP_003902241.1;Parent=gene-DKM08_RS09610;Dbxref=GenBank:WP_003902241.1;Name=WP_003902241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902241.1;locus_tag=DKM08_RS09610;product=DUF2784 domain-containing protein;protein_id=WP_003902241.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1942698 1944203 . - . ID=gene-DKM08_RS09615;Name=lipT;gbkey=Gene;gene=lipT;gene_biotype=protein_coding;locus_tag=DKM08_RS09615;old_locus_tag=DKM08_09605 NZ_QFYX01000001.1 Protein Homology CDS 1942698 1944203 . - 0 ID=cds-WP_003916923.1;Parent=gene-DKM08_RS09615;Dbxref=GenBank:WP_003916923.1;Name=WP_003916923.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;gene=lipT;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940658.1;locus_tag=DKM08_RS09615;product=carboxylesterase/lipase family protein;protein_id=WP_003916923.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1944282 1944938 . + . ID=gene-DKM08_RS09620;Name=DKM08_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09620;old_locus_tag=DKM08_09610 NZ_QFYX01000001.1 Protein Homology CDS 1944282 1944938 . + 0 ID=cds-WP_010950650.1;Parent=gene-DKM08_RS09620;Dbxref=GenBank:WP_010950650.1;Name=WP_010950650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216562.1;locus_tag=DKM08_RS09620;product=hypothetical protein;protein_id=WP_010950650.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1944975 1947539 . - . ID=gene-DKM08_RS09625;Name=DKM08_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09625;old_locus_tag=DKM08_09615 NZ_QFYX01000001.1 Protein Homology CDS 1944975 1947539 . - 0 ID=cds-WP_003410309.1;Parent=gene-DKM08_RS09625;Dbxref=GenBank:WP_003410309.1;Name=WP_003410309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216563.1;locus_tag=DKM08_RS09625;product=sugar epimerase family protein;protein_id=WP_003410309.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1947544 1959999 . - . ID=gene-DKM08_RS09630;Name=DKM08_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09630;old_locus_tag=DKM08_09620 NZ_QFYX01000001.1 Protein Homology CDS 1947544 1959999 . - 0 ID=cds-WP_147020908.1;Parent=gene-DKM08_RS09630;Dbxref=GenBank:WP_147020908.1;Name=WP_147020908.1;Ontology_term=GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216564.2;locus_tag=DKM08_RS09630;product=type I polyketide synthase;protein_id=WP_147020908.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1960306 1960656 . - . ID=gene-DKM08_RS21610;Name=DKM08_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21610 NZ_QFYX01000001.1 Protein Homology CDS 1960306 1960656 . - 0 ID=cds-WP_003912718.1;Parent=gene-DKM08_RS21610;Dbxref=GenBank:WP_003912718.1;Name=WP_003912718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912718.1;locus_tag=DKM08_RS21610;product=hypothetical protein;protein_id=WP_003912718.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1960834 1961169 . + . ID=gene-DKM08_RS09640;Name=rbpA;gbkey=Gene;gene=rbpA;gene_biotype=protein_coding;locus_tag=DKM08_RS09640;old_locus_tag=DKM08_09630 NZ_QFYX01000001.1 Protein Homology CDS 1960834 1961169 . + 0 ID=cds-WP_003410601.1;Parent=gene-DKM08_RS09640;Dbxref=GenBank:WP_003410601.1;Name=WP_003410601.1;gbkey=CDS;gene=rbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216566.1;locus_tag=DKM08_RS09640;product=RNA polymerase-binding protein RbpA;protein_id=WP_003410601.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1961144 1963768 . - . ID=gene-DKM08_RS09645;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=DKM08_RS09645;old_locus_tag=DKM08_09635 NZ_QFYX01000001.1 Protein Homology CDS 1961144 1963768 . - 0 ID=cds-WP_003902238.1;Parent=gene-DKM08_RS09645;Dbxref=GenBank:WP_003902238.1;Name=WP_003902238.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216567.1;locus_tag=DKM08_RS09645;product=apolipoprotein N-acyltransferase;protein_id=WP_003902238.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1963926 1965530 . - . ID=gene-DKM08_RS09650;Name=DKM08_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09650;old_locus_tag=DKM08_09640 NZ_QFYX01000001.1 Protein Homology CDS 1963926 1965530 . - 0 ID=cds-WP_003410605.1;Parent=gene-DKM08_RS09650;Dbxref=GenBank:WP_003410605.1;Name=WP_003410605.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216568.1;locus_tag=DKM08_RS09650;product=amidohydrolase;protein_id=WP_003410605.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1965535 1966062 . - . ID=gene-DKM08_RS09655;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=DKM08_RS09655;old_locus_tag=DKM08_09645 NZ_QFYX01000001.1 Protein Homology CDS 1965535 1966062 . - 0 ID=cds-WP_003410608.1;Parent=gene-DKM08_RS09655;Dbxref=GenBank:WP_003410608.1;Name=WP_003410608.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216569.1;locus_tag=DKM08_RS09655;product=FxsA family protein;protein_id=WP_003410608.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1966138 1966851 . + . ID=gene-DKM08_RS09660;Name=DKM08_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09660;old_locus_tag=DKM08_09650 NZ_QFYX01000001.1 Protein Homology CDS 1966138 1966851 . + 0 ID=cds-WP_003410610.1;Parent=gene-DKM08_RS09660;Dbxref=GenBank:WP_003410610.1;Name=WP_003410610.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216570.1;locus_tag=DKM08_RS09660;product=dienelactone hydrolase family protein;protein_id=WP_003410610.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1967100 1967366 . - . ID=gene-DKM08_RS09665;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DKM08_RS09665;old_locus_tag=DKM08_09655 NZ_QFYX01000001.1 Protein Homology CDS 1967100 1967366 . - 0 ID=cds-WP_003410619.1;Parent=gene-DKM08_RS09665;Dbxref=GenBank:WP_003410619.1;Name=WP_003410619.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216571.1;locus_tag=DKM08_RS09665;product=30S ribosomal protein S18;protein_id=WP_003410619.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1967367 1967672 . - . ID=gene-DKM08_RS09670;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=DKM08_RS09670;old_locus_tag=DKM08_09660 NZ_QFYX01000001.1 Protein Homology CDS 1967367 1967672 . - 0 ID=cds-WP_003410624.1;Parent=gene-DKM08_RS09670;Dbxref=GenBank:WP_003410624.1;Name=WP_003410624.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216572.1;locus_tag=DKM08_RS09670;product=30S ribosomal protein S14;protein_id=WP_003410624.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1967674 1967838 . - . ID=gene-DKM08_RS09675;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DKM08_RS09675;old_locus_tag=DKM08_09665 NZ_QFYX01000001.1 Protein Homology CDS 1967674 1967838 . - 0 ID=cds-WP_003410628.1;Parent=gene-DKM08_RS09675;Dbxref=GenBank:WP_003410628.1;Name=WP_003410628.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=DKM08_RS09675;product=50S ribosomal protein L33;protein_id=WP_003410628.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1967838 1968074 . - . ID=gene-DKM08_RS09680;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DKM08_RS09680;old_locus_tag=DKM08_09670 NZ_QFYX01000001.1 Protein Homology CDS 1967838 1968074 . - 0 ID=cds-WP_003410631.1;Parent=gene-DKM08_RS09680;Dbxref=GenBank:WP_003410631.1;Name=WP_003410631.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216574.1;locus_tag=DKM08_RS09680;product=50S ribosomal protein L28;protein_id=WP_003410631.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1968472 1969161 . + . ID=gene-DKM08_RS22115;Name=DKM08_RS22115;end_range=1969161,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22115;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1968472 1969161 . + 0 ID=cds-DKM08_RS22115;Parent=gene-DKM08_RS22115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046872;end_range=1969161,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.6;locus_tag=DKM08_RS22115;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1969301 1969693 . + . ID=gene-DKM08_RS22120;Name=DKM08_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22120 NZ_QFYX01000001.1 Protein Homology CDS 1969301 1969693 . + 0 ID=cds-WP_229303073.1;Parent=gene-DKM08_RS22120;Dbxref=GenBank:WP_229303073.1;Name=WP_229303073.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013143.6;locus_tag=DKM08_RS22120;product=metal ABC transporter permease;protein_id=WP_229303073.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1969694 1970098 . - . ID=gene-DKM08_RS09690;Name=DKM08_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09690;old_locus_tag=DKM08_09680 NZ_QFYX01000001.1 Protein Homology CDS 1969694 1970098 . - 0 ID=cds-WP_003410645.1;Parent=gene-DKM08_RS09690;Dbxref=GenBank:WP_003410645.1;Name=WP_003410645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216577.1;locus_tag=DKM08_RS09690;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003410645.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1970182 1973766 . - . ID=gene-DKM08_RS09695;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=DKM08_RS09695;old_locus_tag=DKM08_09685 NZ_QFYX01000001.1 Protein Homology CDS 1970182 1973766 . - 0 ID=cds-WP_010950652.1;Parent=gene-DKM08_RS09695;Dbxref=GenBank:WP_010950652.1;Name=WP_010950652.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216578.1;locus_tag=DKM08_RS09695;product=cobaltochelatase subunit CobN;protein_id=WP_010950652.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1973844 1974077 . + . ID=gene-DKM08_RS09700;Name=mazE7;gbkey=Gene;gene=mazE7;gene_biotype=protein_coding;locus_tag=DKM08_RS09700;old_locus_tag=DKM08_09690 NZ_QFYX01000001.1 Protein Homology CDS 1973844 1974077 . + 0 ID=cds-WP_003410651.1;Parent=gene-DKM08_RS09700;Dbxref=GenBank:WP_003410651.1;Name=WP_003410651.1;gbkey=CDS;gene=mazE7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177657.1;locus_tag=DKM08_RS09700;product=type II toxin-antitoxin system antitoxin MazE7;protein_id=WP_003410651.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1974070 1974480 . + . ID=gene-DKM08_RS09705;Name=mazF7;gbkey=Gene;gene=mazF7;gene_biotype=protein_coding;gene_synonym=mazF-mt9;locus_tag=DKM08_RS09705;old_locus_tag=DKM08_09695 NZ_QFYX01000001.1 Protein Homology CDS 1974070 1974480 . + 0 ID=cds-WP_003410654.1;Parent=gene-DKM08_RS09705;Dbxref=GenBank:WP_003410654.1;Name=WP_003410654.1;gbkey=CDS;gene=mazF7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837055.2;locus_tag=DKM08_RS09705;product=type II toxin-antitoxin system toxin endoribonuclease MazF7;protein_id=WP_003410654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1974464 1975555 . + . ID=gene-DKM08_RS09710;Name=cobG;gbkey=Gene;gene=cobG;gene_biotype=protein_coding;locus_tag=DKM08_RS09710;old_locus_tag=DKM08_09700 NZ_QFYX01000001.1 Protein Homology CDS 1974464 1975555 . + 0 ID=cds-WP_003900454.1;Parent=gene-DKM08_RS09710;Dbxref=GenBank:WP_003900454.1;Name=WP_003900454.1;Ontology_term=GO:0019250,GO:0016709;gbkey=CDS;gene=cobG;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=aerobic cobalamin biosynthetic process|0019250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216580.1;locus_tag=DKM08_RS09710;product=precorrin-3B synthase;protein_id=WP_003900454.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1975565 1976191 . + . ID=gene-DKM08_RS09715;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=DKM08_RS09715;old_locus_tag=DKM08_09705 NZ_QFYX01000001.1 Protein Homology CDS 1975565 1976191 . + 0 ID=cds-WP_003410658.1;Parent=gene-DKM08_RS09715;Dbxref=GenBank:WP_003410658.1;Name=WP_003410658.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;gene=cobH;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216581.1;locus_tag=DKM08_RS09715;product=precorrin-8X methylmutase;protein_id=WP_003410658.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1976188 1977714 . + . ID=gene-DKM08_RS09720;Name=cobI;gbkey=Gene;gene=cobI;gene_biotype=protein_coding;locus_tag=DKM08_RS09720;old_locus_tag=DKM08_09710 NZ_QFYX01000001.1 Protein Homology CDS 1976188 1977714 . + 0 ID=cds-WP_003410659.1;Parent=gene-DKM08_RS09720;Dbxref=GenBank:WP_003410659.1;Name=WP_003410659.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;gene=cobI;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216582.1;locus_tag=DKM08_RS09720;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_003410659.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1977660 1978883 . - . ID=gene-DKM08_RS09725;Name=DKM08_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09725;old_locus_tag=DKM08_09715 NZ_QFYX01000001.1 Protein Homology CDS 1977660 1978883 . - 0 ID=cds-WP_003901321.1;Parent=gene-DKM08_RS09725;Dbxref=GenBank:WP_003901321.1;Name=WP_003901321.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216583.1;locus_tag=DKM08_RS09725;product=class I SAM-dependent methyltransferase;protein_id=WP_003901321.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1978899 1979822 . - . ID=gene-DKM08_RS09730;Name=blaC;gbkey=Gene;gene=blaC;gene_biotype=protein_coding;locus_tag=DKM08_RS09730;old_locus_tag=DKM08_09720 NZ_QFYX01000001.1 Protein Homology CDS 1978899 1979822 . - 0 ID=cds-WP_003410677.1;Parent=gene-DKM08_RS09730;Dbxref=GenBank:WP_003410677.1;Name=WP_003410677.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410677.1;locus_tag=DKM08_RS09730;product=class A beta-lactamase BlaC;protein_id=WP_003410677.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1979957 1980514 . + . ID=gene-DKM08_RS09735;Name=sigC;gbkey=Gene;gene=sigC;gene_biotype=protein_coding;locus_tag=DKM08_RS09735;old_locus_tag=DKM08_09725 NZ_QFYX01000001.1 Protein Homology CDS 1979957 1980514 . + 0 ID=cds-WP_003410678.1;Parent=gene-DKM08_RS09735;Dbxref=GenBank:WP_003410678.1;Name=WP_003410678.1;gbkey=CDS;gene=sigC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216585.1;locus_tag=DKM08_RS09735;product=RNA polymerase sigma factor SigC;protein_id=WP_003410678.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1980504 1981239 . - . ID=gene-DKM08_RS09740;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=pseudogene;locus_tag=DKM08_RS09740;old_locus_tag=DKM08_09730;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1980504 1981239 . - 0 ID=cds-DKM08_RS09740;Parent=gene-DKM08_RS09740;Note=frameshifted;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;gene=cobK;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216586.1;locus_tag=DKM08_RS09740;product=cobalt-precorrin-6A reductase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1981236 1981991 . - . ID=gene-DKM08_RS09745;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=DKM08_RS09745;old_locus_tag=DKM08_09735 NZ_QFYX01000001.1 Protein Homology CDS 1981236 1981991 . - 0 ID=cds-WP_003410682.1;Parent=gene-DKM08_RS09745;Dbxref=GenBank:WP_003410682.1;Name=WP_003410682.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216587.1;locus_tag=DKM08_RS09745;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_003410682.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1981988 1983086 . - . ID=gene-DKM08_RS09750;Name=cbiE;end_range=1983086,.;gbkey=Gene;gene=cbiE;gene_biotype=pseudogene;locus_tag=DKM08_RS09750;old_locus_tag=DKM08_09740;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1981988 1983086 . - 0 ID=cds-DKM08_RS09750;Parent=gene-DKM08_RS09750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009236,GO:0046140,GO:0046025;end_range=1983086,.;gbkey=CDS;gene=cbiE;go_function=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) activity|0046025||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,corrin biosynthetic process|0046140||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216588.1;locus_tag=DKM08_RS09750;partial=true;product=precorrin-6y C5%2C15-methyltransferase (decarboxylating) subunit CbiE;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1983089 1983865 . - . ID=gene-DKM08_RS09760;Name=DKM08_RS09760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS09760;old_locus_tag=DKM08_09750;partial=true;pseudo=true;start_range=.,1983089 NZ_QFYX01000001.1 Protein Homology CDS 1983089 1983865 . - 0 ID=cds-DKM08_RS09760;Parent=gene-DKM08_RS09760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216591.1;locus_tag=DKM08_RS09760;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1983089;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1984309 1985280 . - . ID=gene-DKM08_RS09770;Name=DKM08_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09770;old_locus_tag=DKM08_09760 NZ_QFYX01000001.1 Protein Homology CDS 1984309 1985280 . - 0 ID=cds-WP_003899159.1;Parent=gene-DKM08_RS09770;Dbxref=GenBank:WP_003899159.1;Name=WP_003899159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216593.1;locus_tag=DKM08_RS09770;product=hypothetical protein;protein_id=WP_003899159.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1985281 1985580 . - . ID=gene-DKM08_RS09775;Name=DKM08_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09775;old_locus_tag=DKM08_09765 NZ_QFYX01000001.1 Protein Homology CDS 1985281 1985580 . - 0 ID=cds-WP_003410695.1;Parent=gene-DKM08_RS09775;Dbxref=GenBank:WP_003410695.1;Name=WP_003410695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177658.1;locus_tag=DKM08_RS09775;product=hypothetical protein;protein_id=WP_003410695.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1986045 1986359 . + . ID=gene-DKM08_RS09780;Name=DKM08_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09780;old_locus_tag=DKM08_09770 NZ_QFYX01000001.1 Protein Homology CDS 1986045 1986359 . + 0 ID=cds-WP_003410700.1;Parent=gene-DKM08_RS09780;Dbxref=GenBank:WP_003410700.1;Name=WP_003410700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216594.1;locus_tag=DKM08_RS09780;product=DUF2563 family protein;protein_id=WP_003410700.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1986341 1988311 . + . ID=gene-DKM08_RS09785;Name=DKM08_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09785;old_locus_tag=DKM08_09775 NZ_QFYX01000001.1 Protein Homology CDS 1986341 1988311 . + 0 ID=cds-WP_010950653.1;Parent=gene-DKM08_RS09785;Dbxref=GenBank:WP_010950653.1;Name=WP_010950653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216595.1;locus_tag=DKM08_RS09785;product=alpha/beta hydrolase;protein_id=WP_010950653.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1988292 1988855 . + . ID=gene-DKM08_RS09790;Name=DKM08_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09790;old_locus_tag=DKM08_09780 NZ_QFYX01000001.1 Protein Homology CDS 1988292 1988855 . + 0 ID=cds-WP_003410707.1;Parent=gene-DKM08_RS09790;Dbxref=GenBank:WP_003410707.1;Name=WP_003410707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216596.1;locus_tag=DKM08_RS09790;product=hypothetical protein;protein_id=WP_003410707.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1988920 1989084 . + . ID=gene-DKM08_RS22125;Name=DKM08_RS22125;end_range=1989084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22125;partial=true;pseudo=true;start_range=.,1988920 NZ_QFYX01000001.1 Protein Homology CDS 1988920 1989084 . + 0 ID=cds-DKM08_RS22125;Parent=gene-DKM08_RS22125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1989084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=DKM08_RS22125;partial=true;product=DUF5631 domain-containing protein;pseudo=true;start_range=.,1988920;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1989051 1989431 . - . ID=gene-DKM08_RS22130;Name=DKM08_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22130;old_locus_tag=DKM08_09785 NZ_QFYX01000001.1 Protein Homology CDS 1989051 1989431 . - 0 ID=cds-WP_225936777.1;Parent=gene-DKM08_RS22130;Dbxref=GenBank:WP_225936777.1;Name=WP_225936777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216597.1;locus_tag=DKM08_RS22130;product=hypothetical protein;protein_id=WP_225936777.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1989313 1989705 . + . ID=gene-DKM08_RS21620;Name=DKM08_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21620 NZ_QFYX01000001.1 Protein Homology CDS 1989313 1989705 . + 0 ID=cds-WP_223695514.1;Parent=gene-DKM08_RS21620;Dbxref=GenBank:WP_223695514.1;Name=WP_223695514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909575.1;locus_tag=DKM08_RS21620;product=hypothetical protein;protein_id=WP_223695514.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1989695 1991860 . + . ID=gene-DKM08_RS09805;Name=DKM08_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09805;old_locus_tag=DKM08_09795 NZ_QFYX01000001.1 Protein Homology CDS 1989695 1991860 . + 0 ID=cds-WP_010950655.1;Parent=gene-DKM08_RS09805;Dbxref=GenBank:WP_010950655.1;Name=WP_010950655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=DKM08_RS09805;product=DUF5631 domain-containing protein;protein_id=WP_010950655.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1991857 1992801 . + . ID=gene-DKM08_RS09810;Name=DKM08_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09810;old_locus_tag=DKM08_09800 NZ_QFYX01000001.1 Protein Homology CDS 1991857 1992801 . + 0 ID=cds-WP_003903746.1;Parent=gene-DKM08_RS09810;Dbxref=GenBank:WP_003903746.1;Name=WP_003903746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216599.1;locus_tag=DKM08_RS09810;product=hypothetical protein;protein_id=WP_003903746.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1992794 1993941 . + . ID=gene-DKM08_RS09815;Name=DKM08_RS09815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS09815;old_locus_tag=DKM08_09805;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 1992794 1993941 . + 0 ID=cds-DKM08_RS09815;Parent=gene-DKM08_RS09815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216600.1;locus_tag=DKM08_RS09815;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 1994144 1995221 . + . ID=gene-DKM08_RS22135;Name=DKM08_RS22135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22135;partial=true;pseudo=true;start_range=.,1994144 NZ_QFYX01000001.1 Protein Homology CDS 1994144 1995221 . + 0 ID=cds-DKM08_RS22135;Parent=gene-DKM08_RS22135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611776.1;locus_tag=DKM08_RS22135;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1994144;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1995408 1997177 . + . ID=gene-DKM08_RS09830;Name=pknJ;gbkey=Gene;gene=pknJ;gene_biotype=protein_coding;locus_tag=DKM08_RS09830;old_locus_tag=DKM08_09820 NZ_QFYX01000001.1 Protein Homology CDS 1995408 1997177 . + 0 ID=cds-WP_003410735.1;Parent=gene-DKM08_RS09830;Dbxref=GenBank:WP_003410735.1;Name=WP_003410735.1;gbkey=CDS;gene=pknJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216604.1;locus_tag=DKM08_RS09830;product=serine/threonine protein kinase PknJ;protein_id=WP_003410735.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1997194 1998321 . - . ID=gene-DKM08_RS09835;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=DKM08_RS09835;old_locus_tag=DKM08_09825 NZ_QFYX01000001.1 Protein Homology CDS 1997194 1998321 . - 0 ID=cds-WP_003410743.1;Parent=gene-DKM08_RS09835;Dbxref=GenBank:WP_003410743.1;Name=WP_003410743.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepE;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216605.1;locus_tag=DKM08_RS09835;product=M24 family metallopeptidase;protein_id=WP_003410743.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1998538 1999494 . + . ID=gene-DKM08_RS09840;Name=DKM08_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09840;old_locus_tag=DKM08_09830 NZ_QFYX01000001.1 Protein Homology CDS 1998538 1999494 . + 0 ID=cds-WP_003410750.1;Parent=gene-DKM08_RS09840;Dbxref=GenBank:WP_003410750.1;Name=WP_003410750.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705407.1;locus_tag=DKM08_RS09840;product=5'-3' exonuclease;protein_id=WP_003410750.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 1999498 2000232 . - . ID=gene-DKM08_RS09845;Name=DKM08_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09845;old_locus_tag=DKM08_09835 NZ_QFYX01000001.1 Protein Homology CDS 1999498 2000232 . - 0 ID=cds-WP_003410762.1;Parent=gene-DKM08_RS09845;Dbxref=GenBank:WP_003410762.1;Name=WP_003410762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216607.1;locus_tag=DKM08_RS09845;product=DUF4333 domain-containing protein;protein_id=WP_003410762.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2000274 2002994 . - . ID=gene-DKM08_RS09850;Name=helY;gbkey=Gene;gene=helY;gene_biotype=protein_coding;locus_tag=DKM08_RS09850;old_locus_tag=DKM08_09840 NZ_QFYX01000001.1 Protein Homology CDS 2000274 2002994 . - 0 ID=cds-WP_003410763.1;Parent=gene-DKM08_RS09850;Dbxref=GenBank:WP_003410763.1;Name=WP_003410763.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helY;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216608.1;locus_tag=DKM08_RS09850;product=DEAD/DEAH box helicase;protein_id=WP_003410763.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2003043 2003969 . - . ID=gene-DKM08_RS09855;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=DKM08_RS09855;old_locus_tag=DKM08_09845 NZ_QFYX01000001.1 Protein Homology CDS 2003043 2003969 . - 0 ID=cds-WP_003410764.1;Parent=gene-DKM08_RS09855;Dbxref=GenBank:WP_003410764.1;Name=WP_003410764.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216609.1;locus_tag=DKM08_RS09855;product=twin-arginine translocase subunit TatC;protein_id=WP_003410764.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2003986 2004237 . - . ID=gene-DKM08_RS09860;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=DKM08_RS09860;old_locus_tag=DKM08_09850 NZ_QFYX01000001.1 Protein Homology CDS 2003986 2004237 . - 0 ID=cds-WP_003410768.1;Parent=gene-DKM08_RS09860;Dbxref=GenBank:WP_003410768.1;Name=WP_003410768.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216610.1;locus_tag=DKM08_RS09860;product=Sec-independent protein translocase subunit TatA;protein_id=WP_003410768.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2004305 2005255 . - . ID=gene-DKM08_RS09865;Name=pafC;gbkey=Gene;gene=pafC;gene_biotype=protein_coding;locus_tag=DKM08_RS09865;old_locus_tag=DKM08_09855 NZ_QFYX01000001.1 Protein Homology CDS 2004305 2005255 . - 0 ID=cds-WP_003410772.1;Parent=gene-DKM08_RS09865;Dbxref=GenBank:WP_003410772.1;Name=WP_003410772.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216611.1;locus_tag=DKM08_RS09865;product=helix-turn-helix transcriptional regulator;protein_id=WP_003410772.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2005252 2006250 . - . ID=gene-DKM08_RS09870;Name=pafB;gbkey=Gene;gene=pafB;gene_biotype=protein_coding;locus_tag=DKM08_RS09870;old_locus_tag=DKM08_09860 NZ_QFYX01000001.1 Protein Homology CDS 2005252 2006250 . - 0 ID=cds-WP_003410775.1;Parent=gene-DKM08_RS09870;Dbxref=GenBank:WP_003410775.1;Name=WP_003410775.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216612.1;locus_tag=DKM08_RS09870;product=helix-turn-helix transcriptional regulator;protein_id=WP_003410775.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2006259 2007617 . - . ID=gene-DKM08_RS09875;Name=pafA;gbkey=Gene;gene=pafA;gene_biotype=protein_coding;locus_tag=DKM08_RS09875;old_locus_tag=DKM08_09865 NZ_QFYX01000001.1 Protein Homology CDS 2006259 2007617 . - 0 ID=cds-WP_003410781.1;Parent=gene-DKM08_RS09875;Dbxref=GenBank:WP_003410781.1;Name=WP_003410781.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0016879;gbkey=CDS;gene=pafA;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216613.1;locus_tag=DKM08_RS09875;product=Pup--protein ligase;protein_id=WP_003410781.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2007669 2009144 . - . ID=gene-DKM08_RS09880;Name=DKM08_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09880;old_locus_tag=DKM08_09870 NZ_QFYX01000001.1 Protein Homology CDS 2007669 2009144 . - 0 ID=cds-WP_003410786.1;Parent=gene-DKM08_RS09880;Dbxref=GenBank:WP_003410786.1;Name=WP_003410786.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410786.1;locus_tag=DKM08_RS09880;product=PE family protein;protein_id=WP_003410786.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2009441 2010979 . + . ID=gene-DKM08_RS09885;Name=DKM08_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09885;old_locus_tag=DKM08_09875 NZ_QFYX01000001.1 Protein Homology CDS 2009441 2010979 . + 0 ID=cds-WP_023637436.1;Parent=gene-DKM08_RS09885;Dbxref=GenBank:WP_023637436.1;Name=WP_023637436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003926636.1;locus_tag=DKM08_RS09885;product=HNH endonuclease signature motif containing protein;protein_id=WP_023637436.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2011178 2014219 . + . ID=gene-DKM08_RS09890;Name=helZ;gbkey=Gene;gene=helZ;gene_biotype=protein_coding;locus_tag=DKM08_RS09890;old_locus_tag=DKM08_09880 NZ_QFYX01000001.1 Protein Homology CDS 2011178 2014219 . + 0 ID=cds-WP_010950658.1;Parent=gene-DKM08_RS09890;Dbxref=GenBank:WP_010950658.1;Name=WP_010950658.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helZ;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216617.2;locus_tag=DKM08_RS09890;product=DEAD/DEAH box helicase;protein_id=WP_010950658.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2014212 2015045 . + . ID=gene-DKM08_RS09895;Name=DKM08_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09895;old_locus_tag=DKM08_09885 NZ_QFYX01000001.1 Protein Homology CDS 2014212 2015045 . + 0 ID=cds-WP_003899172.1;Parent=gene-DKM08_RS09895;Dbxref=GenBank:WP_003899172.1;Name=WP_003899172.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351184.1;locus_tag=DKM08_RS09895;product=SWIM zinc finger family protein;protein_id=WP_003899172.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2015024 2015458 . - . ID=gene-DKM08_RS09900;Name=DKM08_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09900;old_locus_tag=DKM08_09890 NZ_QFYX01000001.1 Protein Homology CDS 2015024 2015458 . - 0 ID=cds-WP_003410811.1;Parent=gene-DKM08_RS09900;Dbxref=GenBank:WP_003410811.1;Name=WP_003410811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216619.1;locus_tag=DKM08_RS09900;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003410811.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2015465 2015719 . - . ID=gene-DKM08_RS09905;Name=DKM08_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09905;old_locus_tag=DKM08_09895 NZ_QFYX01000001.1 Protein Homology CDS 2015465 2015719 . - 0 ID=cds-WP_003410814.1;Parent=gene-DKM08_RS09905;Dbxref=GenBank:WP_003410814.1;Name=WP_003410814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216620.1;locus_tag=DKM08_RS09905;product=antitoxin;protein_id=WP_003410814.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2015735 2015992 . - . ID=gene-DKM08_RS09910;Name=DKM08_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09910;old_locus_tag=DKM08_09900 NZ_QFYX01000001.1 Protein Homology CDS 2015735 2015992 . - 0 ID=cds-WP_003410816.1;Parent=gene-DKM08_RS09910;Dbxref=GenBank:WP_003410816.1;Name=WP_003410816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030035.1;locus_tag=DKM08_RS09910;product=hypothetical protein;protein_id=WP_003410816.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2016939 2017235 . + . ID=gene-DKM08_RS09920;Name=DKM08_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09920;old_locus_tag=DKM08_09910 NZ_QFYX01000001.1 Protein Homology CDS 2016939 2017235 . + 0 ID=cds-WP_003410820.1;Parent=gene-DKM08_RS09920;Dbxref=GenBank:WP_003410820.1;Name=WP_003410820.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177858.1;locus_tag=DKM08_RS09920;product=PE family protein;protein_id=WP_003410820.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2017291 2018022 . + . ID=gene-DKM08_RS09925;Name=DKM08_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09925;old_locus_tag=DKM08_09915 NZ_QFYX01000001.1 Protein Homology CDS 2017291 2018022 . + 0 ID=cds-WP_003900467.1;Parent=gene-DKM08_RS09925;Dbxref=GenBank:WP_003900467.1;Name=WP_003900467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177859.1;locus_tag=DKM08_RS09925;product=PPE family protein;protein_id=WP_003900467.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2018562 2019308 . - . ID=gene-DKM08_RS09930;Name=prcA;gbkey=Gene;gene=prcA;gene_biotype=protein_coding;locus_tag=DKM08_RS09930;old_locus_tag=DKM08_09920 NZ_QFYX01000001.1 Protein Homology CDS 2018562 2019308 . - 0 ID=cds-WP_003901330.1;Parent=gene-DKM08_RS09930;Dbxref=GenBank:WP_003901330.1;Name=WP_003901330.1;Ontology_term=GO:0051603,GO:0004298,GO:0019773;gbkey=CDS;gene=prcA;go_component=proteasome core complex%2C alpha-subunit complex|0019773||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216625.1;locus_tag=DKM08_RS09930;product=proteasome subunit alpha;protein_id=WP_003901330.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2019305 2020180 . - . ID=gene-DKM08_RS09935;Name=prcB;gbkey=Gene;gene=prcB;gene_biotype=protein_coding;locus_tag=DKM08_RS09935;old_locus_tag=DKM08_09925 NZ_QFYX01000001.1 Protein Homology CDS 2019305 2020180 . - 0 ID=cds-WP_003411023.1;Parent=gene-DKM08_RS09935;Dbxref=GenBank:WP_003411023.1;Name=WP_003411023.1;Ontology_term=GO:0010498,GO:0004298,GO:0005839;gbkey=CDS;gene=prcB;go_component=proteasome core complex|0005839||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteasomal protein catabolic process|0010498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216626.1;locus_tag=DKM08_RS09935;product=proteasome subunit beta;protein_id=WP_003411023.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2020177 2020371 . - . ID=gene-DKM08_RS09940;Name=pup;gbkey=Gene;gene=pup;gene_biotype=protein_coding;locus_tag=DKM08_RS09940;old_locus_tag=DKM08_09930 NZ_QFYX01000001.1 Protein Homology CDS 2020177 2020371 . - 0 ID=cds-WP_003411026.1;Parent=gene-DKM08_RS09940;Dbxref=GenBank:WP_003411026.1;Name=WP_003411026.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0031386,GO:0070628;gbkey=CDS;gene=pup;go_function=protein tag activity|0031386||IEA,proteasome binding|0070628||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003887572.1;locus_tag=DKM08_RS09940;product=ubiquitin-like protein Pup;protein_id=WP_003411026.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2020484 2022001 . - . ID=gene-DKM08_RS09945;Name=dop;gbkey=Gene;gene=dop;gene_biotype=protein_coding;locus_tag=DKM08_RS09945;old_locus_tag=DKM08_09935 NZ_QFYX01000001.1 Protein Homology CDS 2020484 2022001 . - 0 ID=cds-WP_003411029.1;Parent=gene-DKM08_RS09945;Dbxref=GenBank:WP_003411029.1;Name=WP_003411029.1;gbkey=CDS;gene=dop;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411029.1;locus_tag=DKM08_RS09945;product=pup deamidase/depupylase;protein_id=WP_003411029.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2022152 2023345 . + . ID=gene-DKM08_RS09950;Name=DKM08_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09950;old_locus_tag=DKM08_09940 NZ_QFYX01000001.1 Protein Homology CDS 2022152 2023345 . + 0 ID=cds-WP_011799245.1;Parent=gene-DKM08_RS09950;Dbxref=GenBank:WP_011799245.1;Name=WP_011799245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216629.1;locus_tag=DKM08_RS09950;product=hypothetical protein;protein_id=WP_011799245.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2023356 2023979 . + . ID=gene-DKM08_RS09955;Name=DKM08_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09955;old_locus_tag=DKM08_09945 NZ_QFYX01000001.1 Protein Homology CDS 2023356 2023979 . + 0 ID=cds-WP_003411033.1;Parent=gene-DKM08_RS09955;Dbxref=GenBank:WP_003411033.1;Name=WP_003411033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216630.1;locus_tag=DKM08_RS09955;product=hypothetical protein;protein_id=WP_003411033.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2023983 2025812 . - . ID=gene-DKM08_RS09960;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=DKM08_RS09960;old_locus_tag=DKM08_09950 NZ_QFYX01000001.1 Protein Homology CDS 2023983 2025812 . - 0 ID=cds-WP_003411035.1;Parent=gene-DKM08_RS09960;Dbxref=GenBank:WP_003411035.1;Name=WP_003411035.1;Ontology_term=GO:0010498,GO:0019941,GO:0016887,GO:0000502;gbkey=CDS;gene=arc;go_component=proteasome complex|0000502||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216631.1;locus_tag=DKM08_RS09960;product=proteasome ATPase;protein_id=WP_003411035.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2026093 2026662 . + . ID=gene-DKM08_RS09965;Name=DKM08_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09965;old_locus_tag=DKM08_09955 NZ_QFYX01000001.1 Protein Homology CDS 2026093 2026662 . + 0 ID=cds-WP_003900470.1;Parent=gene-DKM08_RS09965;Dbxref=GenBank:WP_003900470.1;Name=WP_003900470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216632.1;locus_tag=DKM08_RS09965;product=hypothetical protein;protein_id=WP_003900470.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2026670 2026963 . + . ID=gene-DKM08_RS09970;Name=DKM08_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09970;old_locus_tag=DKM08_09960 NZ_QFYX01000001.1 Protein Homology CDS 2026670 2026963 . + 0 ID=cds-WP_003411038.1;Parent=gene-DKM08_RS09970;Dbxref=GenBank:WP_003411038.1;Name=WP_003411038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216633.1;locus_tag=DKM08_RS09970;product=DUF503 domain-containing protein;protein_id=WP_003411038.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2026992 2027834 . - . ID=gene-DKM08_RS09975;Name=trmI;gbkey=Gene;gene=trmI;gene_biotype=protein_coding;locus_tag=DKM08_RS09975;old_locus_tag=DKM08_09965 NZ_QFYX01000001.1 Protein Homology CDS 2026992 2027834 . - 0 ID=cds-WP_003411041.1;Parent=gene-DKM08_RS09975;Dbxref=GenBank:WP_003411041.1;Name=WP_003411041.1;gbkey=CDS;gene=trmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216634.1;locus_tag=DKM08_RS09975;product=tRNA (adenine(58)-N(1))-methyltransferase TrmI;protein_id=WP_003411041.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2027908 2028744 . + . ID=gene-DKM08_RS09980;Name=DKM08_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09980;old_locus_tag=DKM08_09970 NZ_QFYX01000001.1 Protein Homology CDS 2027908 2028744 . + 0 ID=cds-WP_003899178.1;Parent=gene-DKM08_RS09980;Dbxref=GenBank:WP_003899178.1;Name=WP_003899178.1;Ontology_term=GO:0003677,GO:0003678,GO:0004518,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,nuclease activity|0004518||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216635.1;locus_tag=DKM08_RS09980;product=RecB family exonuclease;protein_id=WP_003899178.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2028767 2029249 . - . ID=gene-DKM08_RS09985;Name=DKM08_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS09985;old_locus_tag=DKM08_09975 NZ_QFYX01000001.1 Protein Homology CDS 2028767 2029249 . - 0 ID=cds-WP_003900471.1;Parent=gene-DKM08_RS09985;Dbxref=GenBank:WP_003900471.1;Name=WP_003900471.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216636.1;locus_tag=DKM08_RS09985;product=glycine zipper 2TM domain-containing protein;protein_id=WP_003900471.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2029328 2030182 . - . ID=gene-DKM08_RS09990;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=DKM08_RS09990;old_locus_tag=DKM08_09980 NZ_QFYX01000001.1 Protein Homology CDS 2029328 2030182 . - 0 ID=cds-WP_003411047.1;Parent=gene-DKM08_RS09990;Dbxref=GenBank:WP_003411047.1;Name=WP_003411047.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216637.1;locus_tag=DKM08_RS09990;product=ATP phosphoribosyltransferase;protein_id=WP_003411047.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2030185 2030466 . - . ID=gene-DKM08_RS09995;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=DKM08_RS09995;old_locus_tag=DKM08_09985 NZ_QFYX01000001.1 Protein Homology CDS 2030185 2030466 . - 0 ID=cds-WP_003899180.1;Parent=gene-DKM08_RS09995;Dbxref=GenBank:WP_003899180.1;Name=WP_003899180.1;Ontology_term=GO:0004636;gbkey=CDS;gene=hisE;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177860.1;locus_tag=DKM08_RS09995;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_003899180.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2030593 2031987 . + . ID=gene-DKM08_RS10000;Name=DKM08_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10000;old_locus_tag=DKM08_09990 NZ_QFYX01000001.1 Protein Homology CDS 2030593 2031987 . + 0 ID=cds-WP_010950660.1;Parent=gene-DKM08_RS10000;Dbxref=GenBank:WP_010950660.1;Name=WP_010950660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177861.1;locus_tag=DKM08_RS10000;product=PPE family protein;protein_id=WP_010950660.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2031984 2035562 . - . ID=gene-DKM08_RS10005;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=DKM08_RS10005;old_locus_tag=DKM08_09995 NZ_QFYX01000001.1 Protein Homology CDS 2031984 2035562 . - 0 ID=cds-WP_003411056.1;Parent=gene-DKM08_RS10005;Dbxref=GenBank:WP_003411056.1;Name=WP_003411056.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216640.1;locus_tag=DKM08_RS10005;product=methionine synthase;protein_id=WP_003411056.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2035788 2036666 . + . ID=gene-DKM08_RS10010;Name=DKM08_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10010;old_locus_tag=DKM08_10000 NZ_QFYX01000001.1 Protein Homology CDS 2035788 2036666 . + 0 ID=cds-WP_003411060.1;Parent=gene-DKM08_RS10010;Dbxref=GenBank:WP_003411060.1;Name=WP_003411060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216641.1;locus_tag=DKM08_RS10010;product=PAC2 family protein;protein_id=WP_003411060.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2036697 2037467 . - . ID=gene-DKM08_RS10015;Name=DKM08_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10015;old_locus_tag=DKM08_10005 NZ_QFYX01000001.1 Protein Homology CDS 2036697 2037467 . - 0 ID=cds-WP_003411064.1;Parent=gene-DKM08_RS10015;Dbxref=GenBank:WP_003411064.1;Name=WP_003411064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177862.1;locus_tag=DKM08_RS10015;product=PGRS repeat-containing protein;protein_id=WP_003411064.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2037464 2037730 . - . ID=gene-DKM08_RS22140;Name=DKM08_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22140 NZ_QFYX01000001.1 Protein Homology CDS 2037464 2037730 . - 0 ID=cds-WP_003411067.1;Parent=gene-DKM08_RS22140;Dbxref=GenBank:WP_003411067.1;Name=WP_003411067.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=DKM08_RS22140;product=PE family protein;protein_id=WP_003411067.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2038111 2039580 . + . ID=gene-DKM08_RS10020;Name=DKM08_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10020;old_locus_tag=DKM08_10010 NZ_QFYX01000001.1 Protein Homology CDS 2038111 2039580 . + 0 ID=cds-WP_010950662.1;Parent=gene-DKM08_RS10020;Dbxref=GenBank:WP_010950662.1;Name=WP_010950662.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177863.1;locus_tag=DKM08_RS10020;product=amino acid permease;protein_id=WP_010950662.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2039580 2039783 . + . ID=gene-DKM08_RS10025;Name=DKM08_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10025;old_locus_tag=DKM08_10015 NZ_QFYX01000001.1 Protein Homology CDS 2039580 2039783 . + 0 ID=cds-WP_003411082.1;Parent=gene-DKM08_RS10025;Dbxref=GenBank:WP_003411082.1;Name=WP_003411082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216644.1;locus_tag=DKM08_RS10025;product=hypothetical protein;protein_id=WP_003411082.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2039803 2040684 . - . ID=gene-DKM08_RS10030;Name=DKM08_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10030;old_locus_tag=DKM08_10020 NZ_QFYX01000001.1 Protein Homology CDS 2039803 2040684 . - 0 ID=cds-WP_003411086.1;Parent=gene-DKM08_RS10030;Dbxref=GenBank:WP_003411086.1;Name=WP_003411086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216645.1;locus_tag=DKM08_RS10030;product=SDR family oxidoreductase;protein_id=WP_003411086.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2040710 2041954 . - . ID=gene-DKM08_RS10035;Name=mshC;gbkey=Gene;gene=mshC;gene_biotype=protein_coding;locus_tag=DKM08_RS10035;old_locus_tag=DKM08_10025 NZ_QFYX01000001.1 Protein Homology CDS 2040710 2041954 . - 0 ID=cds-WP_003411091.1;Parent=gene-DKM08_RS10035;Dbxref=GenBank:WP_003411091.1;Name=WP_003411091.1;Ontology_term=GO:0010125,GO:0035446;gbkey=CDS;gene=mshC;go_function=cysteine-glucosaminylinositol ligase activity|0035446||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216646.1;locus_tag=DKM08_RS10035;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=WP_003411091.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2042012 2042815 . - . ID=gene-DKM08_RS10040;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=DKM08_RS10040;old_locus_tag=DKM08_10030 NZ_QFYX01000001.1 Protein Homology CDS 2042012 2042815 . - 0 ID=cds-WP_003411096.1;Parent=gene-DKM08_RS10040;Dbxref=GenBank:WP_003411096.1;Name=WP_003411096.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216647.1;locus_tag=DKM08_RS10040;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_003411096.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2042906 2043136 . + . ID=gene-DKM08_RS10045;Name=DKM08_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10045;old_locus_tag=DKM08_10035 NZ_QFYX01000001.1 Protein Homology CDS 2042906 2043136 . + 0 ID=cds-WP_003411099.1;Parent=gene-DKM08_RS10045;Dbxref=GenBank:WP_003411099.1;Name=WP_003411099.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216648.1;locus_tag=DKM08_RS10045;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003411099.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2043346 2044161 . - . ID=gene-DKM08_RS10050;Name=DKM08_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10050;old_locus_tag=DKM08_10040 NZ_QFYX01000001.1 Protein Homology CDS 2043346 2044161 . - 0 ID=cds-WP_003900473.1;Parent=gene-DKM08_RS10050;Dbxref=GenBank:WP_003900473.1;Name=WP_003900473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019306174.1;locus_tag=DKM08_RS10050;product=SCO1664 family protein;protein_id=WP_003900473.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2044145 2044732 . - . ID=gene-DKM08_RS10055;Name=DKM08_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10055;old_locus_tag=DKM08_10045 NZ_QFYX01000001.1 Protein Homology CDS 2044145 2044732 . - 0 ID=cds-WP_003411102.1;Parent=gene-DKM08_RS10055;Dbxref=GenBank:WP_003411102.1;Name=WP_003411102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170405.1;locus_tag=DKM08_RS10055;product=DUF3090 domain-containing protein;protein_id=WP_003411102.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2044796 2045506 . - . ID=gene-DKM08_RS10060;Name=DKM08_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10060;old_locus_tag=DKM08_10050 NZ_QFYX01000001.1 Protein Homology CDS 2044796 2045506 . - 0 ID=cds-WP_003411103.1;Parent=gene-DKM08_RS10060;Dbxref=GenBank:WP_003411103.1;Name=WP_003411103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216651.1;locus_tag=DKM08_RS10060;product=histidine phosphatase family protein;protein_id=WP_003411103.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2045503 2046333 . - . ID=gene-DKM08_RS10065;Name=DKM08_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10065;old_locus_tag=DKM08_10055 NZ_QFYX01000001.1 Protein Homology CDS 2045503 2046333 . - 0 ID=cds-WP_003411105.1;Parent=gene-DKM08_RS10065;Dbxref=GenBank:WP_003411105.1;Name=WP_003411105.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216652.1;locus_tag=DKM08_RS10065;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_003411105.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2046397 2046705 . - . ID=gene-DKM08_RS10070;Name=DKM08_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10070;old_locus_tag=DKM08_10060 NZ_QFYX01000001.1 Protein Homology CDS 2046397 2046705 . - 0 ID=cds-WP_003899184.1;Parent=gene-DKM08_RS10070;Dbxref=GenBank:WP_003899184.1;Name=WP_003899184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872207.1;locus_tag=DKM08_RS10070;product=hypothetical protein;protein_id=WP_003899184.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2046825 2047901 . + . ID=gene-DKM08_RS10075;Name=lppL;gbkey=Gene;gene=lppL;gene_biotype=protein_coding;locus_tag=DKM08_RS10075;old_locus_tag=DKM08_10065 NZ_QFYX01000001.1 Protein Homology CDS 2046825 2047901 . + 0 ID=cds-WP_003411110.1;Parent=gene-DKM08_RS10075;Dbxref=GenBank:WP_003411110.1;Name=WP_003411110.1;gbkey=CDS;gene=lppL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216654.1;locus_tag=DKM08_RS10075;product=YncE family protein;protein_id=WP_003411110.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2047898 2048179 . + . ID=gene-DKM08_RS10080;Name=DKM08_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10080;old_locus_tag=DKM08_10070 NZ_QFYX01000001.1 Protein Homology CDS 2047898 2048179 . + 0 ID=cds-WP_003411112.1;Parent=gene-DKM08_RS10080;Dbxref=GenBank:WP_003411112.1;Name=WP_003411112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283661.1;locus_tag=DKM08_RS10080;product=DUF5703 family protein;protein_id=WP_003411112.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2048215 2049288 . + . ID=gene-DKM08_RS10085;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=DKM08_RS10085;old_locus_tag=DKM08_10075 NZ_QFYX01000001.1 Protein Homology CDS 2048215 2049288 . + 0 ID=cds-WP_003411116.1;Parent=gene-DKM08_RS10085;Dbxref=GenBank:WP_003411116.1;Name=WP_003411116.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216655.1;locus_tag=DKM08_RS10085;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_003411116.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2049293 2049823 . - . ID=gene-DKM08_RS10090;Name=DKM08_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10090;old_locus_tag=DKM08_10080 NZ_QFYX01000001.1 Protein Homology CDS 2049293 2049823 . - 0 ID=cds-WP_003411119.1;Parent=gene-DKM08_RS10090;Dbxref=GenBank:WP_003411119.1;Name=WP_003411119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216656.1;locus_tag=DKM08_RS10090;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003411119.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2049871 2051217 . - . ID=gene-DKM08_RS10095;Name=DKM08_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10095;old_locus_tag=DKM08_10085 NZ_QFYX01000001.1 Protein Homology CDS 2049871 2051217 . - 0 ID=cds-WP_003411121.1;Parent=gene-DKM08_RS10095;Dbxref=GenBank:WP_003411121.1;Name=WP_003411121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177864.1;locus_tag=DKM08_RS10095;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_003411121.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2051598 2051683 . + . ID=gene-DKM08_RS10100;Name=DKM08_RS10100;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS10100;old_locus_tag=DKM08_10090 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2051598 2051683 . + . ID=rna-DKM08_RS10100;Parent=gene-DKM08_RS10100;anticodon=(pos:2051631..2051633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS10100;product=tRNA-Leu NZ_QFYX01000001.1 tRNAscan-SE exon 2051598 2051683 . + . ID=exon-DKM08_RS10100-1;Parent=rna-DKM08_RS10100;anticodon=(pos:2051631..2051633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS10100;product=tRNA-Leu NZ_QFYX01000001.1 RefSeq gene 2051804 2052121 . - . ID=gene-DKM08_RS10105;Name=DKM08_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10105;old_locus_tag=DKM08_10095 NZ_QFYX01000001.1 Protein Homology CDS 2051804 2052121 . - 0 ID=cds-WP_003411124.1;Parent=gene-DKM08_RS10105;Dbxref=GenBank:WP_003411124.1;Name=WP_003411124.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216658.1;locus_tag=DKM08_RS10105;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003411124.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2052118 2052333 . - . ID=gene-DKM08_RS10110;Name=DKM08_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10110;old_locus_tag=DKM08_10100 NZ_QFYX01000001.1 Protein Homology CDS 2052118 2052333 . - 0 ID=cds-WP_003411127.1;Parent=gene-DKM08_RS10110;Dbxref=GenBank:WP_003411127.1;Name=WP_003411127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410825.1;locus_tag=DKM08_RS10110;product=antitoxin ParD2;protein_id=WP_003411127.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2052588 2053646 . + . ID=gene-DKM08_RS10115;Name=DKM08_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10115;old_locus_tag=DKM08_10105 NZ_QFYX01000001.1 Protein Homology CDS 2052588 2053646 . + 0 ID=cds-WP_003411129.1;Parent=gene-DKM08_RS10115;Dbxref=GenBank:WP_003411129.1;Name=WP_003411129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216659.1;locus_tag=DKM08_RS10115;product=phosphoribosyltransferase;protein_id=WP_003411129.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2053776 2054132 . - . ID=gene-DKM08_RS10120;Name=DKM08_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10120;old_locus_tag=DKM08_10110 NZ_QFYX01000001.1 Protein Homology CDS 2053776 2054132 . - 0 ID=cds-WP_003411130.1;Parent=gene-DKM08_RS10120;Dbxref=GenBank:WP_003411130.1;Name=WP_003411130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216660.1;locus_tag=DKM08_RS10120;product=hypothetical protein;protein_id=WP_003411130.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2054227 2055009 . - . ID=gene-DKM08_RS10125;Name=wag31;gbkey=Gene;gene=wag31;gene_biotype=protein_coding;locus_tag=DKM08_RS10125;old_locus_tag=DKM08_10115 NZ_QFYX01000001.1 Protein Homology CDS 2054227 2055009 . - 0 ID=cds-WP_003411131.1;Parent=gene-DKM08_RS10125;Dbxref=GenBank:WP_003411131.1;Name=WP_003411131.1;gbkey=CDS;gene=wag31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216661.1;locus_tag=DKM08_RS10125;product=cell wall synthesis protein Wag31;protein_id=WP_003411131.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2055277 2055567 . - . ID=gene-DKM08_RS10130;Name=DKM08_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10130;old_locus_tag=DKM08_10120 NZ_QFYX01000001.1 Protein Homology CDS 2055277 2055567 . - 0 ID=cds-WP_003900476.1;Parent=gene-DKM08_RS10130;Dbxref=GenBank:WP_003900476.1;Name=WP_003900476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216662.1;locus_tag=DKM08_RS10130;product=YggT family protein;protein_id=WP_003900476.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2055729 2056385 . - . ID=gene-DKM08_RS10135;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=DKM08_RS10135;old_locus_tag=DKM08_10125 NZ_QFYX01000001.1 Protein Homology CDS 2055729 2056385 . - 0 ID=cds-WP_003411133.1;Parent=gene-DKM08_RS10135;Dbxref=GenBank:WP_003411133.1;Name=WP_003411133.1;gbkey=CDS;gene=sepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878111.1;locus_tag=DKM08_RS10135;product=cell division protein SepF;protein_id=WP_003411133.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2056451 2057227 . - . ID=gene-DKM08_RS10140;Name=DKM08_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10140;old_locus_tag=DKM08_10130 NZ_QFYX01000001.1 Protein Homology CDS 2056451 2057227 . - 0 ID=cds-WP_003411137.1;Parent=gene-DKM08_RS10140;Dbxref=GenBank:WP_003411137.1;Name=WP_003411137.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216664.1;locus_tag=DKM08_RS10140;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_003411137.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2057233 2057940 . - . ID=gene-DKM08_RS10145;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=DKM08_RS10145;old_locus_tag=DKM08_10135 NZ_QFYX01000001.1 Protein Homology CDS 2057233 2057940 . - 0 ID=cds-WP_003911777.1;Parent=gene-DKM08_RS10145;Dbxref=GenBank:WP_003911777.1;Name=WP_003911777.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911777.1;locus_tag=DKM08_RS10145;product=peptidoglycan editing factor PgeF;protein_id=WP_003911777.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2057996 2059135 . - . ID=gene-DKM08_RS10150;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=DKM08_RS10150;old_locus_tag=DKM08_10140 NZ_QFYX01000001.1 Protein Homology CDS 2057996 2059135 . - 0 ID=cds-WP_003411144.1;Parent=gene-DKM08_RS10150;Dbxref=GenBank:WP_003411144.1;Name=WP_003411144.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216666.1;locus_tag=DKM08_RS10150;product=cell division protein FtsZ;protein_id=WP_003411144.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2059308 2060252 . - . ID=gene-DKM08_RS10155;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=DKM08_RS10155;old_locus_tag=DKM08_10145 NZ_QFYX01000001.1 Protein Homology CDS 2059308 2060252 . - 0 ID=cds-WP_003411157.1;Parent=gene-DKM08_RS10155;Dbxref=GenBank:WP_003411157.1;Name=WP_003411157.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216667.1;locus_tag=DKM08_RS10155;product=cell division protein FtsQ;protein_id=WP_003411157.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2060249 2061733 . - . ID=gene-DKM08_RS10160;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=DKM08_RS10160;old_locus_tag=DKM08_10150 NZ_QFYX01000001.1 Protein Homology CDS 2060249 2061733 . - 0 ID=cds-WP_003411159.1;Parent=gene-DKM08_RS10160;Dbxref=GenBank:WP_003411159.1;Name=WP_003411159.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216668.1;locus_tag=DKM08_RS10160;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_003411159.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2061730 2062962 . - . ID=gene-DKM08_RS10165;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=DKM08_RS10165;old_locus_tag=DKM08_10155 NZ_QFYX01000001.1 Protein Homology CDS 2061730 2062962 . - 0 ID=cds-WP_010950665.1;Parent=gene-DKM08_RS10165;Dbxref=GenBank:WP_010950665.1;Name=WP_010950665.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216669.1;locus_tag=DKM08_RS10165;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_010950665.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2062959 2064533 . - . ID=gene-DKM08_RS10170;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=DKM08_RS10170;old_locus_tag=DKM08_10160 NZ_QFYX01000001.1 Protein Homology CDS 2062959 2064533 . - 0 ID=cds-WP_003411165.1;Parent=gene-DKM08_RS10170;Dbxref=GenBank:WP_003411165.1;Name=WP_003411165.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216670.1;locus_tag=DKM08_RS10170;product=putative lipid II flippase FtsW;protein_id=WP_003411165.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2064545 2066005 . - . ID=gene-DKM08_RS10175;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=DKM08_RS10175;old_locus_tag=DKM08_10165 NZ_QFYX01000001.1 Protein Homology CDS 2064545 2066005 . - 0 ID=cds-WP_003901342.1;Parent=gene-DKM08_RS10175;Dbxref=GenBank:WP_003901342.1;Name=WP_003901342.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216671.3;locus_tag=DKM08_RS10175;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_003901342.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2066007 2067086 . - . ID=gene-DKM08_RS10180;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=DKM08_RS10180;old_locus_tag=DKM08_10170 NZ_QFYX01000001.1 Protein Homology CDS 2066007 2067086 . - 0 ID=cds-WP_003411171.1;Parent=gene-DKM08_RS10180;Dbxref=GenBank:WP_003411171.1;Name=WP_003411171.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216672.1;locus_tag=DKM08_RS10180;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_003411171.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2067083 2068615 . - . ID=gene-DKM08_RS10185;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=DKM08_RS10185;old_locus_tag=DKM08_10175 NZ_QFYX01000001.1 Protein Homology CDS 2067083 2068615 . - 0 ID=cds-WP_003411187.1;Parent=gene-DKM08_RS10185;Dbxref=GenBank:WP_003411187.1;Name=WP_003411187.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216673.1;locus_tag=DKM08_RS10185;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_003411187.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2068612 2070219 . - . ID=gene-DKM08_RS10190;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=DKM08_RS10190;old_locus_tag=DKM08_10180 NZ_QFYX01000001.1 Protein Homology CDS 2068612 2070219 . - 0 ID=cds-WP_003411189.1;Parent=gene-DKM08_RS10190;Dbxref=GenBank:WP_003411189.1;Name=WP_003411189.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216674.1;locus_tag=DKM08_RS10190;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_003411189.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2070242 2071276 . - . ID=gene-DKM08_RS10195;Name=DKM08_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10195;old_locus_tag=DKM08_10185 NZ_QFYX01000001.1 Protein Homology CDS 2070242 2071276 . - 0 ID=cds-WP_003899194.1;Parent=gene-DKM08_RS10195;Dbxref=GenBank:WP_003899194.1;Name=WP_003899194.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216675.1;locus_tag=DKM08_RS10195;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003899194.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2071273 2071893 . - . ID=gene-DKM08_RS10200;Name=DKM08_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10200;old_locus_tag=DKM08_10190 NZ_QFYX01000001.1 Protein Homology CDS 2071273 2071893 . - 0 ID=cds-WP_003411199.1;Parent=gene-DKM08_RS10200;Dbxref=GenBank:WP_003411199.1;Name=WP_003411199.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411199.1;locus_tag=DKM08_RS10200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411199.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2071886 2072752 . - . ID=gene-DKM08_RS10205;Name=DKM08_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10205;old_locus_tag=DKM08_10195 NZ_QFYX01000001.1 Protein Homology CDS 2071886 2072752 . - 0 ID=cds-WP_003411201.1;Parent=gene-DKM08_RS10205;Dbxref=GenBank:WP_003411201.1;Name=WP_003411201.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216677.1;locus_tag=DKM08_RS10205;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003411201.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2072855 2074327 . - . ID=gene-DKM08_RS10210;Name=DKM08_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10210;old_locus_tag=DKM08_10200 NZ_QFYX01000001.1 Protein Homology CDS 2072855 2074327 . - 0 ID=cds-WP_147020909.1;Parent=gene-DKM08_RS10210;Dbxref=GenBank:WP_147020909.1;Name=WP_147020909.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177865.1;locus_tag=DKM08_RS10210;product=PE family protein;protein_id=WP_147020909.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2074537 2076576 . - . ID=gene-DKM08_RS10215;Name=pbpB;gbkey=Gene;gene=pbpB;gene_biotype=protein_coding;locus_tag=DKM08_RS10215;old_locus_tag=DKM08_10205 NZ_QFYX01000001.1 Protein Homology CDS 2074537 2076576 . - 0 ID=cds-WP_003411214.1;Parent=gene-DKM08_RS10215;Dbxref=GenBank:WP_003411214.1;Name=WP_003411214.1;gbkey=CDS;gene=pbpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216679.1;locus_tag=DKM08_RS10215;product=D%2CD-transpeptidase PbpB;protein_id=WP_003411214.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2076573 2077727 . - . ID=gene-DKM08_RS10220;Name=DKM08_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10220;old_locus_tag=DKM08_10210 NZ_QFYX01000001.1 Protein Homology CDS 2076573 2077727 . - 0 ID=cds-WP_003899197.1;Parent=gene-DKM08_RS10220;Dbxref=GenBank:WP_003899197.1;Name=WP_003899197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216680.1;locus_tag=DKM08_RS10220;product=hypothetical protein;protein_id=WP_003899197.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2077724 2078914 . - . ID=gene-DKM08_RS10225;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=DKM08_RS10225;old_locus_tag=DKM08_10215 NZ_QFYX01000001.1 Protein Homology CDS 2077724 2078914 . - 0 ID=cds-WP_023349550.1;Parent=gene-DKM08_RS10225;Dbxref=GenBank:WP_023349550.1;Name=WP_023349550.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216681.4;locus_tag=DKM08_RS10225;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_023349550.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2078916 2079347 . - . ID=gene-DKM08_RS10230;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=DKM08_RS10230;old_locus_tag=DKM08_10220 NZ_QFYX01000001.1 Protein Homology CDS 2078916 2079347 . - 0 ID=cds-WP_003411225.1;Parent=gene-DKM08_RS10230;Dbxref=GenBank:WP_003411225.1;Name=WP_003411225.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216682.1;locus_tag=DKM08_RS10230;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_003411225.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2079696 2080100 . - . ID=gene-DKM08_RS10235;Name=DKM08_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10235;old_locus_tag=DKM08_10225 NZ_QFYX01000001.1 Protein Homology CDS 2079696 2080100 . - 0 ID=cds-WP_003411231.1;Parent=gene-DKM08_RS10235;Dbxref=GenBank:WP_003411231.1;Name=WP_003411231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216685.1;locus_tag=DKM08_RS10235;product=DUF3040 domain-containing protein;protein_id=WP_003411231.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2080366 2080986 . + . ID=gene-DKM08_RS10240;Name=DKM08_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10240;old_locus_tag=DKM08_10230 NZ_QFYX01000001.1 Protein Homology CDS 2080366 2080986 . + 0 ID=cds-WP_003411235.1;Parent=gene-DKM08_RS10240;Dbxref=GenBank:WP_003411235.1;Name=WP_003411235.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216686.1;locus_tag=DKM08_RS10240;product=GNAT family N-acetyltransferase;protein_id=WP_003411235.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2081082 2081765 . + . ID=gene-DKM08_RS10245;Name=lppM;gbkey=Gene;gene=lppM;gene_biotype=protein_coding;locus_tag=DKM08_RS10245;old_locus_tag=DKM08_10235 NZ_QFYX01000001.1 Protein Homology CDS 2081082 2081765 . + 0 ID=cds-WP_003411238.1;Parent=gene-DKM08_RS10245;Dbxref=GenBank:WP_003411238.1;Name=WP_003411238.1;gbkey=CDS;gene=lppM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216687.1;locus_tag=DKM08_RS10245;product=lipoprotein LppM;protein_id=WP_003411238.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2081762 2082667 . - . ID=gene-DKM08_RS10250;Name=DKM08_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10250;old_locus_tag=DKM08_10240 NZ_QFYX01000001.1 Protein Homology CDS 2081762 2082667 . - 0 ID=cds-WP_003411241.1;Parent=gene-DKM08_RS10250;Dbxref=GenBank:WP_003411241.1;Name=WP_003411241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216688.1;locus_tag=DKM08_RS10250;product=mycobacterial-type methylenetetrahydrofolate reductase;protein_id=WP_003411241.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2082978 2084036 . + . ID=gene-DKM08_RS10255;Name=idsA2;gbkey=Gene;gene=idsA2;gene_biotype=protein_coding;locus_tag=DKM08_RS10255;old_locus_tag=DKM08_10245 NZ_QFYX01000001.1 Protein Homology CDS 2082978 2084036 . + 0 ID=cds-WP_003411245.1;Parent=gene-DKM08_RS10255;Dbxref=GenBank:WP_003411245.1;Name=WP_003411245.1;Ontology_term=GO:0008299,GO:0033384,GO:0004161,GO:0004337,GO:0004659;gbkey=CDS;gene=idsA2;go_function=dimethylallyltranstransferase activity|0004161||IEA,(2E%2C6E)-farnesyl diphosphate synthase activity|0004337||IEA,prenyltransferase activity|0004659||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,geranyl diphosphate biosynthetic process|0033384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216689.1;locus_tag=DKM08_RS10255;product=bifunctional (2E%2C6E)-farnesyl/geranyl diphosphate synthase;protein_id=WP_003411245.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2084040 2085590 . + . ID=gene-DKM08_RS10260;Name=mptA;gbkey=Gene;gene=mptA;gene_biotype=protein_coding;locus_tag=DKM08_RS10260;old_locus_tag=DKM08_10250 NZ_QFYX01000001.1 Protein Homology CDS 2084040 2085590 . + 0 ID=cds-WP_003903784.1;Parent=gene-DKM08_RS10260;Dbxref=GenBank:WP_003903784.1;Name=WP_003903784.1;gbkey=CDS;gene=mptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216690.1;locus_tag=DKM08_RS10260;product=alpha-(1->6)-mannopyranosyltransferase A;protein_id=WP_003903784.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2085577 2085981 . - . ID=gene-DKM08_RS10265;Name=DKM08_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10265;old_locus_tag=DKM08_10255 NZ_QFYX01000001.1 Protein Homology CDS 2085577 2085981 . - 0 ID=cds-WP_003411249.1;Parent=gene-DKM08_RS10265;Dbxref=GenBank:WP_003411249.1;Name=WP_003411249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020787128.1;locus_tag=DKM08_RS10265;product=Rv2175c family DNA-binding protein;protein_id=WP_003411249.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2086072 2087271 . + . ID=gene-DKM08_RS10270;Name=pknL;gbkey=Gene;gene=pknL;gene_biotype=protein_coding;locus_tag=DKM08_RS10270;old_locus_tag=DKM08_10260 NZ_QFYX01000001.1 Protein Homology CDS 2086072 2087271 . + 0 ID=cds-WP_003910517.1;Parent=gene-DKM08_RS10270;Dbxref=GenBank:WP_003910517.1;Name=WP_003910517.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknL;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216692.1;locus_tag=DKM08_RS10270;product=protein kinase domain-containing protein;protein_id=WP_003910517.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2087413 2088012 . - . ID=gene-DKM08_RS10275;Name=DKM08_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10275;old_locus_tag=DKM08_10265 NZ_QFYX01000001.1 Protein Homology CDS 2087413 2088012 . - 0 ID=cds-WP_186806993.1;Parent=gene-DKM08_RS10275;Dbxref=GenBank:WP_186806993.1;Name=WP_186806993.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.6;locus_tag=DKM08_RS10275;product=transposase;protein_id=WP_186806993.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2088012 2088194 . - . ID=gene-DKM08_RS10280;Name=DKM08_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10280;old_locus_tag=DKM08_10270 NZ_QFYX01000001.1 Protein Homology CDS 2088012 2088194 . - 0 ID=cds-WP_003905774.1;Parent=gene-DKM08_RS10280;Dbxref=GenBank:WP_003905774.1;Name=WP_003905774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905774.1;locus_tag=DKM08_RS10280;product=hypothetical protein;protein_id=WP_003905774.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2088463 2089851 . - . ID=gene-DKM08_RS10285;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=DKM08_RS10285;old_locus_tag=DKM08_10275 NZ_QFYX01000001.1 Protein Homology CDS 2088463 2089851 . - 0 ID=cds-WP_003411323.1;Parent=gene-DKM08_RS10285;Dbxref=GenBank:WP_003411323.1;Name=WP_003411323.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216694.1;locus_tag=DKM08_RS10285;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_003411323.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2089942 2090448 . - . ID=gene-DKM08_RS10290;Name=DKM08_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10290;old_locus_tag=DKM08_10280 NZ_QFYX01000001.1 Protein Homology CDS 2089942 2090448 . - 0 ID=cds-WP_003411331.1;Parent=gene-DKM08_RS10290;Dbxref=GenBank:WP_003411331.1;Name=WP_003411331.1;Ontology_term=GO:0000287,GO:0008408;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216695.1;locus_tag=DKM08_RS10290;product=polyadenylate-specific 3'-exoribonuclease AS;protein_id=WP_003411331.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2090458 2091345 . - . ID=gene-DKM08_RS10295;Name=DKM08_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10295;old_locus_tag=DKM08_10285 NZ_QFYX01000001.1 Protein Homology CDS 2090458 2091345 . - 0 ID=cds-WP_010950668.1;Parent=gene-DKM08_RS10295;Dbxref=GenBank:WP_010950668.1;Name=WP_010950668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216696.1;locus_tag=DKM08_RS10295;product=hypothetical protein;protein_id=WP_010950668.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2091433 2092716 . + . ID=gene-DKM08_RS10300;Name=DKM08_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10300;old_locus_tag=DKM08_10290 NZ_QFYX01000001.1 Protein Homology CDS 2091433 2092716 . + 0 ID=cds-WP_003411339.1;Parent=gene-DKM08_RS10300;Dbxref=GenBank:WP_003411339.1;Name=WP_003411339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216697.1;locus_tag=DKM08_RS10300;product=alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase;protein_id=WP_003411339.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2092717 2093460 . - . ID=gene-DKM08_RS10305;Name=DKM08_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10305;old_locus_tag=DKM08_10295 NZ_QFYX01000001.1 Protein Homology CDS 2092717 2093460 . - 0 ID=cds-WP_003411341.1;Parent=gene-DKM08_RS10305;Dbxref=GenBank:WP_003411341.1;Name=WP_003411341.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216698.1;locus_tag=DKM08_RS10305;product=lysophospholipid acyltransferase family protein;protein_id=WP_003411341.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2093546 2093941 . - . ID=gene-DKM08_RS10310;Name=DKM08_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10310;old_locus_tag=DKM08_10300 NZ_QFYX01000001.1 Protein Homology CDS 2093546 2093941 . - 0 ID=cds-WP_003411344.1;Parent=gene-DKM08_RS10310;Dbxref=GenBank:WP_003411344.1;Name=WP_003411344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216699.1;locus_tag=DKM08_RS10310;product=hypothetical protein;protein_id=WP_003411344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2093938 2095200 . - . ID=gene-DKM08_RS10315;Name=DKM08_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10315;old_locus_tag=DKM08_10305 NZ_QFYX01000001.1 Protein Homology CDS 2093938 2095200 . - 0 ID=cds-WP_003914048.1;Parent=gene-DKM08_RS10315;Dbxref=GenBank:WP_003914048.1;Name=WP_003914048.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914048.1;locus_tag=DKM08_RS10315;product=ArsA family ATPase;protein_id=WP_003914048.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2095197 2095631 . - . ID=gene-DKM08_RS10320;Name=DKM08_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10320;old_locus_tag=DKM08_10310 NZ_QFYX01000001.1 Protein Homology CDS 2095197 2095631 . - 0 ID=cds-WP_003411354.1;Parent=gene-DKM08_RS10320;Dbxref=GenBank:WP_003411354.1;Name=WP_003411354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216701.1;locus_tag=DKM08_RS10320;product=SRPBCC family protein;protein_id=WP_003411354.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2095736 2096125 . - . ID=gene-DKM08_RS10325;Name=DKM08_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10325;old_locus_tag=DKM08_10315 NZ_QFYX01000001.1 Protein Homology CDS 2095736 2096125 . - 0 ID=cds-WP_003411357.1;Parent=gene-DKM08_RS10325;Dbxref=GenBank:WP_003411357.1;Name=WP_003411357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216702.1;locus_tag=DKM08_RS10325;product=hypothetical protein;protein_id=WP_003411357.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2096291 2098092 . + . ID=gene-DKM08_RS10335;Name=DKM08_RS10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS10335;old_locus_tag=DKM08_10325;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2096291 2098092 . + 0 ID=cds-DKM08_RS10335;Parent=gene-DKM08_RS10335;Note=frameshifted;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216703.1;locus_tag=DKM08_RS10335;product=AMP-dependent synthetase/ligase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2098123 2099280 . - . ID=gene-DKM08_RS10340;Name=pimB;gbkey=Gene;gene=pimB;gene_biotype=protein_coding;locus_tag=DKM08_RS10340;old_locus_tag=DKM08_10330 NZ_QFYX01000001.1 Protein Homology CDS 2098123 2099280 . - 0 ID=cds-WP_003411369.1;Parent=gene-DKM08_RS10340;Dbxref=GenBank:WP_003411369.1;Name=WP_003411369.1;gbkey=CDS;gene=pimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216704.2;locus_tag=DKM08_RS10340;product=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;protein_id=WP_003411369.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2099377 2100150 . - . ID=gene-DKM08_RS10345;Name=DKM08_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10345;old_locus_tag=DKM08_10335 NZ_QFYX01000001.1 Protein Homology CDS 2099377 2100150 . - 0 ID=cds-WP_003411371.1;Parent=gene-DKM08_RS10345;Dbxref=GenBank:WP_003411371.1;Name=WP_003411371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216705.1;locus_tag=DKM08_RS10345;product=hypothetical protein;protein_id=WP_003411371.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2100245 2101402 . - . ID=gene-DKM08_RS10350;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=DKM08_RS10350;old_locus_tag=DKM08_10340 NZ_QFYX01000001.1 Protein Homology CDS 2100245 2101402 . - 0 ID=cds-WP_003411373.1;Parent=gene-DKM08_RS10350;Dbxref=GenBank:WP_003411373.1;Name=WP_003411373.1;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216706.1;locus_tag=DKM08_RS10350;product=peptidoglycan hydrolase RipC;protein_id=WP_003411373.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2101588 2101866 . - . ID=gene-DKM08_RS10355;Name=DKM08_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10355;old_locus_tag=DKM08_10345 NZ_QFYX01000001.1 Protein Homology CDS 2101588 2101866 . - 0 ID=cds-WP_003908818.1;Parent=gene-DKM08_RS10355;Dbxref=GenBank:WP_003908818.1;Name=WP_003908818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908818.1;locus_tag=DKM08_RS10355;product=hypothetical protein;protein_id=WP_003908818.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2101973 2103823 . + . ID=gene-DKM08_RS10360;Name=DKM08_RS10360;end_range=2103823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS10360;old_locus_tag=DKM08_10350;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2101973 2103823 . + 0 ID=cds-DKM08_RS10360;Parent=gene-DKM08_RS10360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2103823,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005903.0;locus_tag=DKM08_RS10360;partial=true;product=DEDD exonuclease domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2103761 2104873 . - . ID=gene-DKM08_RS10365;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=DKM08_RS10365;old_locus_tag=DKM08_10355 NZ_QFYX01000001.1 Protein Homology CDS 2103761 2104873 . - 0 ID=cds-WP_003411387.1;Parent=gene-DKM08_RS10365;Dbxref=GenBank:WP_003411387.1;Name=WP_003411387.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216708.1;locus_tag=DKM08_RS10365;product=anthranilate phosphoribosyltransferase;protein_id=WP_003411387.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2105031 2105642 . + . ID=gene-DKM08_RS10370;Name=ctaE;gbkey=Gene;gene=ctaE;gene_biotype=protein_coding;locus_tag=DKM08_RS10370;old_locus_tag=DKM08_10360 NZ_QFYX01000001.1 Protein Homology CDS 2105031 2105642 . + 0 ID=cds-WP_003411389.1;Parent=gene-DKM08_RS10370;Dbxref=GenBank:WP_003411389.1;Name=WP_003411389.1;Ontology_term=GO:0009060,GO:0019646,GO:0004129,GO:0009055;gbkey=CDS;gene=ctaE;go_function=cytochrome-c oxidase activity|0004129||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA,aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216709.1;locus_tag=DKM08_RS10370;product=cytochrome c oxidase subunit 3;protein_id=WP_003411389.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2105683 2106525 . + . ID=gene-DKM08_RS10375;Name=qcrC;gbkey=Gene;gene=qcrC;gene_biotype=protein_coding;locus_tag=DKM08_RS10375;old_locus_tag=DKM08_10365 NZ_QFYX01000001.1 Protein Homology CDS 2105683 2106525 . + 0 ID=cds-WP_003411392.1;Parent=gene-DKM08_RS10375;Dbxref=GenBank:WP_003411392.1;Name=WP_003411392.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;gene=qcrC;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216710.1;locus_tag=DKM08_RS10375;product=c-type cytochrome;protein_id=WP_003411392.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2106528 2106599 . + . ID=gene-DKM08_RS22735;Name=DKM08_RS22735;end_range=2106599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22735;partial=true;pseudo=true;start_range=.,2106528 NZ_QFYX01000001.1 Protein Homology CDS 2106528 2106599 . + 0 ID=cds-DKM08_RS22735;Parent=gene-DKM08_RS22735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2106599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=DKM08_RS22735;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,2106528;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2106600 2107811 . + . ID=gene-DKM08_RS10380;Name=DKM08_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10380;old_locus_tag=DKM08_10370 NZ_QFYX01000001.1 Protein Homology CDS 2106600 2107811 . + 0 ID=cds-WP_031657271.1;Parent=gene-DKM08_RS10380;Dbxref=GenBank:WP_031657271.1;Name=WP_031657271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911816.1;locus_tag=DKM08_RS10380;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_031657271.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2107808 2109457 . + . ID=gene-DKM08_RS10385;Name=qcrB;gbkey=Gene;gene=qcrB;gene_biotype=protein_coding;locus_tag=DKM08_RS10385;old_locus_tag=DKM08_10375 NZ_QFYX01000001.1 Protein Homology CDS 2107808 2109457 . + 0 ID=cds-WP_003899212.1;Parent=gene-DKM08_RS10385;Dbxref=GenBank:WP_003899212.1;Name=WP_003899212.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;gene=qcrB;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216712.1;locus_tag=DKM08_RS10385;product=cytochrome b;protein_id=WP_003899212.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2109748 2110392 . - . ID=gene-DKM08_RS10390;Name=DKM08_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10390;old_locus_tag=DKM08_10380 NZ_QFYX01000001.1 Protein Homology CDS 2109748 2110392 . - 0 ID=cds-WP_003411401.1;Parent=gene-DKM08_RS10390;Dbxref=GenBank:WP_003411401.1;Name=WP_003411401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216713.1;locus_tag=DKM08_RS10390;product=DUF2561 family protein;protein_id=WP_003411401.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2110392 2111291 . - . ID=gene-DKM08_RS10395;Name=DKM08_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10395;old_locus_tag=DKM08_10385 NZ_QFYX01000001.1 Protein Homology CDS 2110392 2111291 . - 0 ID=cds-WP_003411405.1;Parent=gene-DKM08_RS10395;Dbxref=GenBank:WP_003411405.1;Name=WP_003411405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216714.1;locus_tag=DKM08_RS10395;product=MmpS family transport accessory protein;protein_id=WP_003411405.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2111477 2111896 . - . ID=gene-DKM08_RS10400;Name=DKM08_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10400;old_locus_tag=DKM08_10390 NZ_QFYX01000001.1 Protein Homology CDS 2111477 2111896 . - 0 ID=cds-WP_003411408.1;Parent=gene-DKM08_RS10400;Dbxref=GenBank:WP_003411408.1;Name=WP_003411408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216715.1;locus_tag=DKM08_RS10400;product=cytochrome c oxidase subunit 4;protein_id=WP_003411408.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2111904 2112995 . - . ID=gene-DKM08_RS10405;Name=ctaC;gbkey=Gene;gene=ctaC;gene_biotype=protein_coding;locus_tag=DKM08_RS10405;old_locus_tag=DKM08_10395 NZ_QFYX01000001.1 Protein Homology CDS 2111904 2112995 . - 0 ID=cds-WP_003899214.1;Parent=gene-DKM08_RS10405;Dbxref=GenBank:WP_003899214.1;Name=WP_003899214.1;Ontology_term=GO:0042773,GO:0004129,GO:0005507,GO:0020037;gbkey=CDS;gene=ctaC;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216716.1;locus_tag=DKM08_RS10405;product=cytochrome c oxidase subunit II;protein_id=WP_003899214.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2113241 2115199 . + . ID=gene-DKM08_RS10410;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=DKM08_RS10410;old_locus_tag=DKM08_10400 NZ_QFYX01000001.1 Protein Homology CDS 2113241 2115199 . + 0 ID=cds-WP_003411413.1;Parent=gene-DKM08_RS10410;Dbxref=GenBank:WP_003411413.1;Name=WP_003411413.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216717.1;locus_tag=DKM08_RS10410;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_003411413.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2115297 2116271 . - . ID=gene-DKM08_RS10415;Name=adoK;gbkey=Gene;gene=adoK;gene_biotype=protein_coding;locus_tag=DKM08_RS10415;old_locus_tag=DKM08_10405 NZ_QFYX01000001.1 Protein Homology CDS 2115297 2116271 . - 0 ID=cds-WP_003411414.1;Parent=gene-DKM08_RS10415;Dbxref=GenBank:WP_003411414.1;Name=WP_003411414.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=adoK;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216718.1;locus_tag=DKM08_RS10415;product=carbohydrate kinase family protein;protein_id=WP_003411414.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2116475 2117167 . + . ID=gene-DKM08_RS10420;Name=DKM08_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10420;old_locus_tag=DKM08_10410 NZ_QFYX01000001.1 Protein Homology CDS 2116475 2117167 . + 0 ID=cds-WP_003411415.1;Parent=gene-DKM08_RS10420;Dbxref=GenBank:WP_003411415.1;Name=WP_003411415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216719.1;locus_tag=DKM08_RS10420;product=membrane protein;protein_id=WP_003411415.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2117175 2117531 . - . ID=gene-DKM08_RS10425;Name=DKM08_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10425;old_locus_tag=DKM08_10415 NZ_QFYX01000001.1 Protein Homology CDS 2117175 2117531 . - 0 ID=cds-WP_003411418.1;Parent=gene-DKM08_RS10425;Dbxref=GenBank:WP_003411418.1;Name=WP_003411418.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216720.1;locus_tag=DKM08_RS10425;product=HesB/IscA family protein;protein_id=WP_003411418.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2117631 2118707 . - . ID=gene-DKM08_RS10430;Name=DKM08_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10430;old_locus_tag=DKM08_10420 NZ_QFYX01000001.1 Protein Homology CDS 2117631 2118707 . - 0 ID=cds-WP_003411420.1;Parent=gene-DKM08_RS10430;Dbxref=GenBank:WP_003411420.1;Name=WP_003411420.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216721.2;locus_tag=DKM08_RS10430;product=glycerate kinase;protein_id=WP_003411420.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2118866 2119576 . + . ID=gene-DKM08_RS10435;Name=DKM08_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10435;old_locus_tag=DKM08_10425 NZ_QFYX01000001.1 Protein Homology CDS 2118866 2119576 . + 0 ID=cds-WP_003411425.1;Parent=gene-DKM08_RS10435;Dbxref=GenBank:WP_003411425.1;Name=WP_003411425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216722.2;locus_tag=DKM08_RS10435;product=DUF3043 domain-containing protein;protein_id=WP_003411425.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2119655 2120740 . + . ID=gene-DKM08_RS10440;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=DKM08_RS10440;old_locus_tag=DKM08_10430 NZ_QFYX01000001.1 Protein Homology CDS 2119655 2120740 . + 0 ID=cds-WP_003411429.1;Parent=gene-DKM08_RS10440;Dbxref=GenBank:WP_003411429.1;Name=WP_003411429.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216723.1;locus_tag=DKM08_RS10440;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_003411429.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2120737 2121486 . + . ID=gene-DKM08_RS10445;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=DKM08_RS10445;old_locus_tag=DKM08_10435 NZ_QFYX01000001.1 Protein Homology CDS 2120737 2121486 . + 0 ID=cds-WP_003411433.1;Parent=gene-DKM08_RS10445;Dbxref=GenBank:WP_003411433.1;Name=WP_003411433.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216724.1;locus_tag=DKM08_RS10445;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_003411433.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2121644 2123182 . + . ID=gene-DKM08_RS10450;Name=DKM08_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10450;old_locus_tag=DKM08_10440 NZ_QFYX01000001.1 Protein Homology CDS 2121644 2123182 . + 0 ID=cds-WP_003899218.1;Parent=gene-DKM08_RS10450;Dbxref=GenBank:WP_003899218.1;Name=WP_003899218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216725.1;locus_tag=DKM08_RS10450;product=hypothetical protein;protein_id=WP_003899218.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2123108 2124214 . - . ID=gene-DKM08_RS10455;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=DKM08_RS10455;old_locus_tag=DKM08_10445 NZ_QFYX01000001.1 Protein Homology CDS 2123108 2124214 . - 0 ID=cds-WP_010950673.1;Parent=gene-DKM08_RS10455;Dbxref=GenBank:WP_010950673.1;Name=WP_010950673.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216726.1;locus_tag=DKM08_RS10455;product=branched-chain amino acid aminotransferase;protein_id=WP_010950673.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2124286 2125389 . - . ID=gene-DKM08_RS10460;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=DKM08_RS10460;old_locus_tag=DKM08_10450 NZ_QFYX01000001.1 Protein Homology CDS 2124286 2125389 . - 0 ID=cds-WP_003899219.1;Parent=gene-DKM08_RS10460;Dbxref=GenBank:WP_003899219.1;Name=WP_003899219.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907977.1;locus_tag=DKM08_RS10460;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_003899219.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2125434 2126570 . + . ID=gene-DKM08_RS10465;Name=DKM08_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10465;old_locus_tag=DKM08_10455 NZ_QFYX01000001.1 Protein Homology CDS 2125434 2126570 . + 0 ID=cds-WP_003411442.1;Parent=gene-DKM08_RS10465;Dbxref=GenBank:WP_003411442.1;Name=WP_003411442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216728.1;locus_tag=DKM08_RS10465;product=adenylyl cyclase;protein_id=WP_003411442.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2126582 2128129 . + . ID=gene-DKM08_RS10470;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=DKM08_RS10470;old_locus_tag=DKM08_10460 NZ_QFYX01000001.1 Protein Homology CDS 2126582 2128129 . + 0 ID=cds-WP_003411444.1;Parent=gene-DKM08_RS10470;Dbxref=GenBank:WP_003411444.1;Name=WP_003411444.1;Ontology_term=GO:0006508,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216729.1;locus_tag=DKM08_RS10470;product=leucyl aminopeptidase;protein_id=WP_003411444.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2128167 2129945 . - . ID=gene-DKM08_RS10475;Name=ephD;gbkey=Gene;gene=ephD;gene_biotype=protein_coding;locus_tag=DKM08_RS10475;old_locus_tag=DKM08_10465 NZ_QFYX01000001.1 Protein Homology CDS 2128167 2129945 . - 0 ID=cds-WP_003411445.1;Parent=gene-DKM08_RS10475;Dbxref=GenBank:WP_003411445.1;Name=WP_003411445.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ephD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216730.1;locus_tag=DKM08_RS10475;product=SDR family oxidoreductase;protein_id=WP_003411445.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2130209 2131870 . + . ID=gene-DKM08_RS10480;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=DKM08_RS10480;old_locus_tag=DKM08_10470 NZ_QFYX01000001.1 Protein Homology CDS 2130209 2131870 . + 0 ID=cds-WP_003411450.1;Parent=gene-DKM08_RS10480;Dbxref=GenBank:WP_003411450.1;Name=WP_003411450.1;Ontology_term=GO:0016746;gbkey=CDS;gene=sucB;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216731.1;locus_tag=DKM08_RS10480;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=WP_003411450.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2131870 2132775 . + . ID=gene-DKM08_RS10485;Name=DKM08_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10485;old_locus_tag=DKM08_10475 NZ_QFYX01000001.1 Protein Homology CDS 2131870 2132775 . + 0 ID=cds-WP_003411454.1;Parent=gene-DKM08_RS10485;Dbxref=GenBank:WP_003411454.1;Name=WP_003411454.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216732.1;locus_tag=DKM08_RS10485;product=TIGR01777 family oxidoreductase;protein_id=WP_003411454.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2132828 2133520 . + . ID=gene-DKM08_RS10490;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=DKM08_RS10490;old_locus_tag=DKM08_10480 NZ_QFYX01000001.1 Protein Homology CDS 2132828 2133520 . + 0 ID=cds-WP_010950674.1;Parent=gene-DKM08_RS10490;Dbxref=GenBank:WP_010950674.1;Name=WP_010950674.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216733.1;locus_tag=DKM08_RS10490;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_010950674.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2133517 2134452 . + . ID=gene-DKM08_RS10495;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=DKM08_RS10495;old_locus_tag=DKM08_10485 NZ_QFYX01000001.1 Protein Homology CDS 2133517 2134452 . + 0 ID=cds-WP_003411460.1;Parent=gene-DKM08_RS10495;Dbxref=GenBank:WP_003411460.1;Name=WP_003411460.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216734.1;locus_tag=DKM08_RS10495;product=lipoyl synthase;protein_id=WP_003411460.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2134479 2135231 . + . ID=gene-DKM08_RS10500;Name=DKM08_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10500;old_locus_tag=DKM08_10490 NZ_QFYX01000001.1 Protein Homology CDS 2134479 2135231 . + 0 ID=cds-WP_010950675.1;Parent=gene-DKM08_RS10500;Dbxref=GenBank:WP_010950675.1;Name=WP_010950675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216735.1;locus_tag=DKM08_RS10500;product=DUF4191 domain-containing protein;protein_id=WP_010950675.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2135238 2135660 . - . ID=gene-DKM08_RS10505;Name=DKM08_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10505;old_locus_tag=DKM08_10495 NZ_QFYX01000001.1 Protein Homology CDS 2135238 2135660 . - 0 ID=cds-WP_003411466.1;Parent=gene-DKM08_RS10505;Dbxref=GenBank:WP_003411466.1;Name=WP_003411466.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177661.1;locus_tag=DKM08_RS10505;product=RDD family protein;protein_id=WP_003411466.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2135859 2137295 . + . ID=gene-DKM08_RS10510;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=DKM08_RS10510;old_locus_tag=DKM08_10500 NZ_QFYX01000001.1 Protein Homology CDS 2135859 2137295 . + 0 ID=cds-WP_003411475.1;Parent=gene-DKM08_RS10510;Dbxref=GenBank:WP_003411475.1;Name=WP_003411475.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216736.1;locus_tag=DKM08_RS10510;product=type I glutamate--ammonia ligase;protein_id=WP_003411475.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2137613 2140597 . - . ID=gene-DKM08_RS10515;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=DKM08_RS10515;old_locus_tag=DKM08_10505 NZ_QFYX01000001.1 Protein Homology CDS 2137613 2140597 . - 0 ID=cds-WP_003411478.1;Parent=gene-DKM08_RS10515;Dbxref=GenBank:WP_003411478.1;Name=WP_003411478.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216737.1;locus_tag=DKM08_RS10515;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;protein_id=WP_003411478.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2140646 2141986 . - . ID=gene-DKM08_RS10520;Name=DKM08_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10520;old_locus_tag=DKM08_10510 NZ_QFYX01000001.1 Protein Homology CDS 2140646 2141986 . - 0 ID=cds-WP_003411482.1;Parent=gene-DKM08_RS10520;Dbxref=GenBank:WP_003411482.1;Name=WP_003411482.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216738.1;locus_tag=DKM08_RS10520;product=glutamine synthetase family protein;protein_id=WP_003411482.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2142081 2143643 . - . ID=gene-DKM08_RS10525;Name=caeB;gbkey=Gene;gene=caeB;gene_biotype=protein_coding;locus_tag=DKM08_RS10525;old_locus_tag=DKM08_10515 NZ_QFYX01000001.1 Protein Homology CDS 2142081 2143643 . - 0 ID=cds-WP_003411484.1;Parent=gene-DKM08_RS10525;Dbxref=GenBank:WP_003411484.1;Name=WP_003411484.1;gbkey=CDS;gene=caeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216739.1;locus_tag=DKM08_RS10525;product=carboxylesterase CaeB;protein_id=WP_003411484.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2143705 2145267 . - . ID=gene-DKM08_RS10530;Name=caeA;gbkey=Gene;gene=caeA;gene_biotype=protein_coding;locus_tag=DKM08_RS10530;old_locus_tag=DKM08_10520 NZ_QFYX01000001.1 Protein Homology CDS 2143705 2145267 . - 0 ID=cds-WP_003411486.1;Parent=gene-DKM08_RS10530;Dbxref=GenBank:WP_003411486.1;Name=WP_003411486.1;gbkey=CDS;gene=caeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216740.1;locus_tag=DKM08_RS10530;product=carboxylesterase CaeA;protein_id=WP_003411486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2145469 2145690 . - . ID=gene-DKM08_RS10535;Name=DKM08_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10535;old_locus_tag=DKM08_10525 NZ_QFYX01000001.1 Protein Homology CDS 2145469 2145690 . - 0 ID=cds-WP_012054189.1;Parent=gene-DKM08_RS10535;Dbxref=GenBank:WP_012054189.1;Name=WP_012054189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030036.1;locus_tag=DKM08_RS10535;product=hypothetical protein;protein_id=WP_012054189.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2145986 2146831 . + . ID=gene-DKM08_RS10540;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=DKM08_RS10540;old_locus_tag=DKM08_10530 NZ_QFYX01000001.1 Protein Homology CDS 2145986 2146831 . + 0 ID=cds-WP_003411489.1;Parent=gene-DKM08_RS10540;Dbxref=GenBank:WP_003411489.1;Name=WP_003411489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216741.1;locus_tag=DKM08_RS10540;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_003411489.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2147076 2148617 . + . ID=gene-DKM08_RS10545;Name=DKM08_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10545;old_locus_tag=DKM08_10535 NZ_QFYX01000001.1 Protein Homology CDS 2147076 2148617 . + 0 ID=cds-WP_010950676.1;Parent=gene-DKM08_RS10545;Dbxref=GenBank:WP_010950676.1;Name=WP_010950676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216742.1;locus_tag=DKM08_RS10545;product=CYTH and CHAD domain-containing protein;protein_id=WP_010950676.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2148630 2149058 . - . ID=gene-DKM08_RS10550;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=DKM08_RS10550;old_locus_tag=DKM08_10540 NZ_QFYX01000001.1 cmsearch RNase_P_RNA 2148630 2149058 . - . ID=rna-DKM08_RS10550;Parent=gene-DKM08_RS10550;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS10550;product=RNase P RNA component class A NZ_QFYX01000001.1 cmsearch exon 2148630 2149058 . - . ID=exon-DKM08_RS10550-1;Parent=rna-DKM08_RS10550;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS10550;product=RNase P RNA component class A NZ_QFYX01000001.1 RefSeq gene 2149167 2149877 . + . ID=gene-DKM08_RS10555;Name=DKM08_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10555;old_locus_tag=DKM08_10545 NZ_QFYX01000001.1 Protein Homology CDS 2149167 2149877 . + 0 ID=cds-WP_015385284.1;Parent=gene-DKM08_RS10555;Dbxref=GenBank:WP_015385284.1;Name=WP_015385284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170864.1;locus_tag=DKM08_RS10555;product=2OG-Fe(II) oxygenase;protein_id=WP_015385284.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2149889 2150983 . - . ID=gene-DKM08_RS10560;Name=DKM08_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10560;old_locus_tag=DKM08_10550 NZ_QFYX01000001.1 Protein Homology CDS 2149889 2150983 . - 0 ID=cds-WP_003899226.1;Parent=gene-DKM08_RS10560;Dbxref=GenBank:WP_003899226.1;Name=WP_003899226.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872350.1;locus_tag=DKM08_RS10560;product=bifunctional RNase H/acid phosphatase;protein_id=WP_003899226.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2150980 2151717 . - . ID=gene-DKM08_RS10565;Name=DKM08_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10565;old_locus_tag=DKM08_10555 NZ_QFYX01000001.1 Protein Homology CDS 2150980 2151717 . - 0 ID=cds-WP_010950678.1;Parent=gene-DKM08_RS10565;Dbxref=GenBank:WP_010950678.1;Name=WP_010950678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216745.1;locus_tag=DKM08_RS10565;product=zinc ribbon domain-containing protein;protein_id=WP_010950678.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2151714 2152853 . - . ID=gene-DKM08_RS10570;Name=DKM08_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10570;old_locus_tag=DKM08_10560 NZ_QFYX01000001.1 Protein Homology CDS 2151714 2152853 . - 0 ID=cds-WP_003411502.1;Parent=gene-DKM08_RS10570;Dbxref=GenBank:WP_003411502.1;Name=WP_003411502.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216746.1;locus_tag=DKM08_RS10570;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_003411502.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2152850 2153935 . - . ID=gene-DKM08_RS10575;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=DKM08_RS10575;old_locus_tag=DKM08_10565 NZ_QFYX01000001.1 Protein Homology CDS 2152850 2153935 . - 0 ID=cds-WP_079092157.1;Parent=gene-DKM08_RS10575;Dbxref=GenBank:WP_079092157.1;Name=WP_079092157.1;Ontology_term=GO:0009236,GO:0030170;gbkey=CDS;gene=cobC;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF005915.0;locus_tag=DKM08_RS10575;product=Rv2231c family pyridoxal phosphate-dependent protein CobC;protein_id=WP_079092157.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2153981 2154406 . - . ID=gene-DKM08_RS10580;Name=DKM08_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10580;old_locus_tag=DKM08_10570 NZ_QFYX01000001.1 Protein Homology CDS 2153981 2154406 . - 0 ID=cds-WP_010886140.1;Parent=gene-DKM08_RS10580;Dbxref=GenBank:WP_010886140.1;Name=WP_010886140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410917.1;locus_tag=DKM08_RS10580;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_010886140.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2154452 2154628 . - . ID=gene-DKM08_RS21625;Name=DKM08_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21625 NZ_QFYX01000001.1 Protein Homology CDS 2154452 2154628 . - 0 ID=cds-WP_003903810.1;Parent=gene-DKM08_RS21625;Dbxref=GenBank:WP_003903810.1;Name=WP_003903810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410918.1;locus_tag=DKM08_RS21625;product=antitoxin VapB16;protein_id=WP_003903810.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2154673 2155398 . + . ID=gene-DKM08_RS10590;Name=ptkA;gbkey=Gene;gene=ptkA;gene_biotype=protein_coding;locus_tag=DKM08_RS10590;old_locus_tag=DKM08_10580 NZ_QFYX01000001.1 Protein Homology CDS 2154673 2155398 . + 0 ID=cds-WP_015288273.1;Parent=gene-DKM08_RS10590;Dbxref=GenBank:WP_015288273.1;Name=WP_015288273.1;gbkey=CDS;gene=ptkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290517.1;locus_tag=DKM08_RS10590;product=Rv2232 family HAD-type protein-tyrosine kinase;protein_id=WP_015288273.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2155391 2155882 . + . ID=gene-DKM08_RS10595;Name=ptpA;gbkey=Gene;gene=ptpA;gene_biotype=protein_coding;locus_tag=DKM08_RS10595;old_locus_tag=DKM08_10585 NZ_QFYX01000001.1 Protein Homology CDS 2155391 2155882 . + 0 ID=cds-WP_003411510.1;Parent=gene-DKM08_RS10595;Dbxref=GenBank:WP_003411510.1;Name=WP_003411510.1;gbkey=CDS;gene=ptpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216750.1;locus_tag=DKM08_RS10595;product=protein-tyrosine-phosphatase;protein_id=WP_003411510.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2155882 2156697 . + . ID=gene-DKM08_RS10600;Name=DKM08_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10600;old_locus_tag=DKM08_10590 NZ_QFYX01000001.1 Protein Homology CDS 2155882 2156697 . + 0 ID=cds-WP_003411514.1;Parent=gene-DKM08_RS10600;Dbxref=GenBank:WP_003411514.1;Name=WP_003411514.1;Ontology_term=GO:0033617,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=mitochondrial cytochrome c oxidase assembly|0033617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216751.1;locus_tag=DKM08_RS10600;product=SURF1 family protein;protein_id=WP_003411514.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2156679 2157620 . - . ID=gene-DKM08_RS10605;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=DKM08_RS10605;old_locus_tag=DKM08_10595 NZ_QFYX01000001.1 Protein Homology CDS 2156679 2157620 . - 0 ID=cds-WP_003411516.1;Parent=gene-DKM08_RS10605;Dbxref=GenBank:WP_003411516.1;Name=WP_003411516.1;Ontology_term=GO:0009236,GO:0048472;gbkey=CDS;gene=cobD;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216752.1;locus_tag=DKM08_RS10605;product=cobalamin biosynthesis protein;protein_id=WP_003411516.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2157686 2158501 . + . ID=gene-DKM08_RS10610;Name=DKM08_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10610;old_locus_tag=DKM08_10600 NZ_QFYX01000001.1 Protein Homology CDS 2157686 2158501 . + 0 ID=cds-WP_003411520.1;Parent=gene-DKM08_RS10610;Dbxref=GenBank:WP_003411520.1;Name=WP_003411520.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411520.1;locus_tag=DKM08_RS10610;product=oxygenase MpaB family protein;protein_id=WP_003411520.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2158596 2158721 . - . ID=gene-DKM08_RS22415;Name=DKM08_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22415 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 2158596 2158721 . - 0 ID=cds-WP_009936466.1;Parent=gene-DKM08_RS22415;Dbxref=GenBank:WP_009936466.1;Name=WP_009936466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22415;product=hypothetical protein;protein_id=WP_009936466.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2158843 2158914 . - . ID=gene-DKM08_RS10620;Name=DKM08_RS10620;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS10620;old_locus_tag=DKM08_10610 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2158843 2158914 . - . ID=rna-DKM08_RS10620;Parent=gene-DKM08_RS10620;anticodon=(pos:complement(2158880..2158882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS10620;product=tRNA-Val NZ_QFYX01000001.1 tRNAscan-SE exon 2158843 2158914 . - . ID=exon-DKM08_RS10620-1;Parent=rna-DKM08_RS10620;anticodon=(pos:complement(2158880..2158882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS10620;product=tRNA-Val NZ_QFYX01000001.1 RefSeq gene 2158960 2159421 . - . ID=gene-DKM08_RS10625;Name=ahpE;gbkey=Gene;gene=ahpE;gene_biotype=protein_coding;locus_tag=DKM08_RS10625;old_locus_tag=DKM08_10615 NZ_QFYX01000001.1 Protein Homology CDS 2158960 2159421 . - 0 ID=cds-WP_003411527.1;Parent=gene-DKM08_RS10625;Dbxref=GenBank:WP_003411527.1;Name=WP_003411527.1;gbkey=CDS;gene=ahpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216754.1;locus_tag=DKM08_RS10625;product=peroxiredoxin AhpE;protein_id=WP_003411527.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2159421 2159843 . - . ID=gene-DKM08_RS10630;Name=DKM08_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10630;old_locus_tag=DKM08_10620 NZ_QFYX01000001.1 Protein Homology CDS 2159421 2159843 . - 0 ID=cds-WP_003911787.1;Parent=gene-DKM08_RS10630;Dbxref=GenBank:WP_003911787.1;Name=WP_003911787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911787.1;locus_tag=DKM08_RS10630;product=DUF3052 domain-containing protein;protein_id=WP_003911787.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2159935 2160525 . - . ID=gene-DKM08_RS10635;Name=DKM08_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10635;old_locus_tag=DKM08_10625 NZ_QFYX01000001.1 Protein Homology CDS 2159935 2160525 . - 0 ID=cds-WP_031652337.1;Parent=gene-DKM08_RS10635;Dbxref=GenBank:WP_031652337.1;Name=WP_031652337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216756.2;locus_tag=DKM08_RS10635;product=hypothetical protein;protein_id=WP_031652337.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2160696 2163488 . + . ID=gene-DKM08_RS10640;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=DKM08_RS10640;old_locus_tag=DKM08_10630 NZ_QFYX01000001.1 Protein Homology CDS 2160696 2163488 . + 0 ID=cds-WP_003911788.1;Parent=gene-DKM08_RS10640;Dbxref=GenBank:WP_003911788.1;Name=WP_003911788.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911788.1;locus_tag=DKM08_RS10640;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_003911788.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2163548 2164792 . + . ID=gene-DKM08_RS10645;Name=DKM08_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10645;old_locus_tag=DKM08_10635 NZ_QFYX01000001.1 Protein Homology CDS 2163548 2164792 . + 0 ID=cds-WP_003411543.1;Parent=gene-DKM08_RS10645;Dbxref=GenBank:WP_003411543.1;Name=WP_003411543.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216758.1;locus_tag=DKM08_RS10645;product=PucR family transcriptional regulator;protein_id=WP_003411543.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2165031 2165939 . + . ID=gene-DKM08_RS10650;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=DKM08_RS10650;old_locus_tag=DKM08_10640 NZ_QFYX01000001.1 Protein Homology CDS 2165031 2165939 . + 0 ID=cds-WP_003411559.1;Parent=gene-DKM08_RS10650;Dbxref=GenBank:WP_003411559.1;Name=WP_003411559.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216759.1;locus_tag=DKM08_RS10650;product=malonyl CoA-acyl carrier protein transacylase;protein_id=WP_003411559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2166015 2166362 . + . ID=gene-DKM08_RS10655;Name=acpM;gbkey=Gene;gene=acpM;gene_biotype=protein_coding;locus_tag=DKM08_RS10655;old_locus_tag=DKM08_10645 NZ_QFYX01000001.1 Protein Homology CDS 2166015 2166362 . + 0 ID=cds-WP_003411565.1;Parent=gene-DKM08_RS10655;Dbxref=GenBank:WP_003411565.1;Name=WP_003411565.1;Ontology_term=GO:0071768;gbkey=CDS;gene=acpM;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216760.1;locus_tag=DKM08_RS10655;product=meromycolate extension acyl carrier protein AcpM;protein_id=WP_003411565.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2166359 2167609 . + . ID=gene-DKM08_RS10660;Name=kasA;gbkey=Gene;gene=kasA;gene_biotype=protein_coding;locus_tag=DKM08_RS10660;old_locus_tag=DKM08_10650 NZ_QFYX01000001.1 Protein Homology CDS 2166359 2167609 . + 0 ID=cds-WP_003411571.1;Parent=gene-DKM08_RS10660;Dbxref=GenBank:WP_003411571.1;Name=WP_003411571.1;gbkey=CDS;gene=kasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216761.1;locus_tag=DKM08_RS10660;product=3-oxoacyl-ACP synthase KasA;protein_id=WP_003411571.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2167703 2168956 . + . ID=gene-DKM08_RS10665;Name=kasB;gbkey=Gene;gene=kasB;gene_biotype=protein_coding;locus_tag=DKM08_RS10665;old_locus_tag=DKM08_10655 NZ_QFYX01000001.1 Protein Homology CDS 2167703 2168956 . + 0 ID=cds-WP_003411576.1;Parent=gene-DKM08_RS10665;Dbxref=GenBank:WP_003411576.1;Name=WP_003411576.1;gbkey=CDS;gene=kasB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411576.1;locus_tag=DKM08_RS10665;product=3-oxoacyl-ACP synthase KasB;protein_id=WP_003411576.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2168987 2170408 . + . ID=gene-DKM08_RS10670;Name=DKM08_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10670;old_locus_tag=DKM08_10660 NZ_QFYX01000001.1 Protein Homology CDS 2168987 2170408 . + 0 ID=cds-WP_003900487.1;Parent=gene-DKM08_RS10670;Dbxref=GenBank:WP_003900487.1;Name=WP_003900487.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216763.1;locus_tag=DKM08_RS10670;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003900487.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2170444 2171331 . + . ID=gene-DKM08_RS10675;Name=DKM08_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10675;old_locus_tag=DKM08_10665 NZ_QFYX01000001.1 Protein Homology CDS 2170444 2171331 . + 0 ID=cds-WP_003900488.1;Parent=gene-DKM08_RS10675;Dbxref=GenBank:WP_003900488.1;Name=WP_003900488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584819.1;locus_tag=DKM08_RS10675;product=hypothetical protein;protein_id=WP_003900488.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2171400 2172950 . - . ID=gene-DKM08_RS10680;Name=DKM08_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10680;old_locus_tag=DKM08_10670 NZ_QFYX01000001.1 Protein Homology CDS 2171400 2172950 . - 0 ID=cds-WP_147020911.1;Parent=gene-DKM08_RS10680;Dbxref=GenBank:WP_147020911.1;Name=WP_147020911.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216765.1;locus_tag=DKM08_RS10680;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_147020911.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2172944 2173513 . - . ID=gene-DKM08_RS10685;Name=DKM08_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10685;old_locus_tag=DKM08_10675 NZ_QFYX01000001.1 Protein Homology CDS 2172944 2173513 . - 0 ID=cds-WP_003411595.1;Parent=gene-DKM08_RS10685;Dbxref=GenBank:WP_003411595.1;Name=WP_003411595.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216766.2;locus_tag=DKM08_RS10685;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411595.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2173561 2175150 . + . ID=gene-DKM08_RS10690;Name=DKM08_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10690;old_locus_tag=DKM08_10680 NZ_QFYX01000001.1 Protein Homology CDS 2173561 2175150 . + 0 ID=cds-WP_003411596.1;Parent=gene-DKM08_RS10690;Dbxref=GenBank:WP_003411596.1;Name=WP_003411596.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575176.1;locus_tag=DKM08_RS10690;product=FAD-binding oxidoreductase;protein_id=WP_003411596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2175147 2176076 . + . ID=gene-DKM08_RS10695;Name=DKM08_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10695;old_locus_tag=DKM08_10685 NZ_QFYX01000001.1 Protein Homology CDS 2175147 2176076 . + 0 ID=cds-WP_003411603.1;Parent=gene-DKM08_RS10695;Dbxref=GenBank:WP_003411603.1;Name=WP_003411603.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216768.1;locus_tag=DKM08_RS10695;product=diacylglycerol kinase;protein_id=WP_003411603.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2176142 2176645 . + . ID=gene-DKM08_RS10700;Name=DKM08_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10700;old_locus_tag=DKM08_10690 NZ_QFYX01000001.1 Protein Homology CDS 2176142 2176645 . + 0 ID=cds-WP_003411608.1;Parent=gene-DKM08_RS10700;Dbxref=GenBank:WP_003411608.1;Name=WP_003411608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216769.1;locus_tag=DKM08_RS10700;product=hypothetical protein;protein_id=WP_003411608.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2176678 2177133 . - . ID=gene-DKM08_RS10705;Name=DKM08_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10705;old_locus_tag=DKM08_10695 NZ_QFYX01000001.1 Protein Homology CDS 2176678 2177133 . - 0 ID=cds-WP_010950682.1;Parent=gene-DKM08_RS10705;Dbxref=GenBank:WP_010950682.1;Name=WP_010950682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216770.1;locus_tag=DKM08_RS10705;product=LysE family transporter;protein_id=WP_010950682.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2177138 2177332 . - . ID=gene-DKM08_RS10710;Name=DKM08_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10710;old_locus_tag=DKM08_10700 NZ_QFYX01000001.1 Protein Homology CDS 2177138 2177332 . - 0 ID=cds-WP_003902152.1;Parent=gene-DKM08_RS10710;Dbxref=GenBank:WP_003902152.1;Name=WP_003902152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030037.1;locus_tag=DKM08_RS10710;product=hypothetical protein;protein_id=WP_003902152.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2177252 2177470 . + . ID=gene-DKM08_RS10715;Name=DKM08_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10715;old_locus_tag=DKM08_10705 NZ_QFYX01000001.1 Protein Homology CDS 2177252 2177470 . + 0 ID=cds-WP_023349553.1;Parent=gene-DKM08_RS10715;Dbxref=GenBank:WP_023349553.1;Name=WP_023349553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411612.1;locus_tag=DKM08_RS10715;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_023349553.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2177499 2178011 . - . ID=gene-DKM08_RS10720;Name=DKM08_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10720;old_locus_tag=DKM08_10710 NZ_QFYX01000001.1 Protein Homology CDS 2177499 2178011 . - 0 ID=cds-WP_031657273.1;Parent=gene-DKM08_RS10720;Dbxref=GenBank:WP_031657273.1;Name=WP_031657273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005085219.1;locus_tag=DKM08_RS10720;product=DUF3145 domain-containing protein;protein_id=WP_031657273.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2178162 2178980 . - . ID=gene-DKM08_RS10725;Name=DKM08_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10725;old_locus_tag=DKM08_10715 NZ_QFYX01000001.1 Protein Homology CDS 2178162 2178980 . - 0 ID=cds-WP_023349554.1;Parent=gene-DKM08_RS10725;Dbxref=GenBank:WP_023349554.1;Name=WP_023349554.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216773.1;locus_tag=DKM08_RS10725;product=serine hydrolase domain-containing protein;protein_id=WP_023349554.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2178994 2180055 . - . ID=gene-DKM08_RS10730;Name=DKM08_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10730;old_locus_tag=DKM08_10720 NZ_QFYX01000001.1 Protein Homology CDS 2178994 2180055 . - 0 ID=cds-WP_023349555.1;Parent=gene-DKM08_RS10730;Dbxref=GenBank:WP_023349555.1;Name=WP_023349555.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216774.1;locus_tag=DKM08_RS10730;product=class I SAM-dependent methyltransferase;protein_id=WP_023349555.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2180297 2181382 . + . ID=gene-DKM08_RS10735;Name=mscR;gbkey=Gene;gene=mscR;gene_biotype=protein_coding;locus_tag=DKM08_RS10735;old_locus_tag=DKM08_10725 NZ_QFYX01000001.1 Protein Homology CDS 2180297 2181382 . + 0 ID=cds-WP_003899236.1;Parent=gene-DKM08_RS10735;Dbxref=GenBank:WP_003899236.1;Name=WP_003899236.1;Ontology_term=GO:0010127,GO:0050607;gbkey=CDS;gene=mscR;go_function=mycothiol-dependent formaldehyde dehydrogenase activity|0050607||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216775.1;locus_tag=DKM08_RS10735;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=WP_003899236.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2181382 2182017 . + . ID=gene-DKM08_RS10740;Name=DKM08_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10740;old_locus_tag=DKM08_10730 NZ_QFYX01000001.1 Protein Homology CDS 2181382 2182017 . + 0 ID=cds-WP_003411632.1;Parent=gene-DKM08_RS10740;Dbxref=GenBank:WP_003411632.1;Name=WP_003411632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216776.1;locus_tag=DKM08_RS10740;product=MBL fold metallo-hydrolase;protein_id=WP_003411632.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2182094 2183602 . - . ID=gene-DKM08_RS10745;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=DKM08_RS10745;old_locus_tag=DKM08_10735 NZ_QFYX01000001.1 Protein Homology CDS 2182094 2183602 . - 0 ID=cds-WP_003901363.1;Parent=gene-DKM08_RS10745;Dbxref=GenBank:WP_003901363.1;Name=WP_003901363.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901363.1;locus_tag=DKM08_RS10745;product=apolipoprotein N-acyltransferase;protein_id=WP_003901363.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2183691 2184644 . + . ID=gene-DKM08_RS10750;Name=DKM08_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10750;old_locus_tag=DKM08_10740 NZ_QFYX01000001.1 Protein Homology CDS 2183691 2184644 . + 0 ID=cds-WP_003899238.1;Parent=gene-DKM08_RS10750;Dbxref=GenBank:WP_003899238.1;Name=WP_003899238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216779.1;locus_tag=DKM08_RS10750;product=SDR family oxidoreductase;protein_id=WP_003899238.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2184622 2186400 . - . ID=gene-DKM08_RS10755;Name=DKM08_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10755;old_locus_tag=DKM08_10745 NZ_QFYX01000001.1 Protein Homology CDS 2184622 2186400 . - 0 ID=cds-WP_147020912.1;Parent=gene-DKM08_RS10755;Dbxref=GenBank:WP_147020912.1;Name=WP_147020912.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216780.1;locus_tag=DKM08_RS10755;product=Hsp70 family protein;protein_id=WP_147020912.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2186750 2187979 . + . ID=gene-DKM08_RS10760;Name=DKM08_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10760;old_locus_tag=DKM08_10750 NZ_QFYX01000001.1 Protein Homology CDS 2186750 2187979 . + 0 ID=cds-WP_003899241.1;Parent=gene-DKM08_RS10760;Dbxref=GenBank:WP_003899241.1;Name=WP_003899241.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216781.1;locus_tag=DKM08_RS10760;product=MFS transporter;protein_id=WP_003899241.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2188154 2189440 . + . ID=gene-DKM08_RS10765;Name=cyp124;gbkey=Gene;gene=cyp124;gene_biotype=protein_coding;locus_tag=DKM08_RS10765;old_locus_tag=DKM08_10755 NZ_QFYX01000001.1 Protein Homology CDS 2188154 2189440 . + 0 ID=cds-WP_003411654.1;Parent=gene-DKM08_RS10765;Dbxref=GenBank:WP_003411654.1;Name=WP_003411654.1;gbkey=CDS;gene=cyp124;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216782.1;locus_tag=DKM08_RS10765;product=methyl-branched lipid omega-hydroxylase Cyp124;protein_id=WP_003411654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2189694 2190860 . - . ID=gene-DKM08_RS10770;Name=DKM08_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10770;old_locus_tag=DKM08_10760 NZ_QFYX01000001.1 Protein Homology CDS 2189694 2190860 . - 0 ID=cds-WP_003411661.1;Parent=gene-DKM08_RS10770;Dbxref=GenBank:WP_003411661.1;Name=WP_003411661.1;Ontology_term=GO:0008146,GO:0050656,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfotransferase activity|0008146||IEA,3'-phosphoadenosine 5'-phosphosulfate binding|0050656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216783.1;locus_tag=DKM08_RS10770;product=sulfotransferase family protein;protein_id=WP_003411661.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2190857 2192326 . - . ID=gene-DKM08_RS10775;Name=DKM08_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10775;old_locus_tag=DKM08_10765 NZ_QFYX01000001.1 Protein Homology CDS 2190857 2192326 . - 0 ID=cds-WP_003411663.1;Parent=gene-DKM08_RS10775;Dbxref=GenBank:WP_003411663.1;Name=WP_003411663.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216784.1;locus_tag=DKM08_RS10775;product=cytochrome P450;protein_id=WP_003411663.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2192339 2192671 . - . ID=gene-DKM08_RS10780;Name=DKM08_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10780;old_locus_tag=DKM08_10770 NZ_QFYX01000001.1 Protein Homology CDS 2192339 2192671 . - 0 ID=cds-WP_003902155.1;Parent=gene-DKM08_RS10780;Dbxref=GenBank:WP_003902155.1;Name=WP_003902155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216785.1;locus_tag=DKM08_RS10780;product=hypothetical protein;protein_id=WP_003902155.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2192748 2193275 . + . ID=gene-DKM08_RS10785;Name=DKM08_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10785;old_locus_tag=DKM08_10775 NZ_QFYX01000001.1 Protein Homology CDS 2192748 2193275 . + 0 ID=cds-WP_003411668.1;Parent=gene-DKM08_RS10785;Dbxref=GenBank:WP_003411668.1;Name=WP_003411668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216786.1;locus_tag=DKM08_RS10785;product=hypothetical protein;protein_id=WP_003411668.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2193382 2193681 . + . ID=gene-DKM08_RS10790;Name=DKM08_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10790;old_locus_tag=DKM08_10780 NZ_QFYX01000001.1 Protein Homology CDS 2193382 2193681 . + 0 ID=cds-WP_003899242.1;Parent=gene-DKM08_RS10790;Dbxref=GenBank:WP_003899242.1;Name=WP_003899242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216787.1;locus_tag=DKM08_RS10790;product=DUF2695 domain-containing protein;protein_id=WP_003899242.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2193787 2194155 . + . ID=gene-DKM08_RS10795;Name=DKM08_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10795;old_locus_tag=DKM08_10785 NZ_QFYX01000001.1 Protein Homology CDS 2193787 2194155 . + 0 ID=cds-WP_003411674.1;Parent=gene-DKM08_RS10795;Dbxref=GenBank:WP_003411674.1;Name=WP_003411674.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216788.1;locus_tag=DKM08_RS10795;product=YidH family protein;protein_id=WP_003411674.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2194152 2194481 . + . ID=gene-DKM08_RS10800;Name=DKM08_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10800;old_locus_tag=DKM08_10790 NZ_QFYX01000001.1 Protein Homology CDS 2194152 2194481 . + 0 ID=cds-WP_003411678.1;Parent=gene-DKM08_RS10800;Dbxref=GenBank:WP_003411678.1;Name=WP_003411678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216789.1;locus_tag=DKM08_RS10800;product=DUF202 domain-containing protein;protein_id=WP_003411678.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2194538 2194855 . - . ID=gene-DKM08_RS10805;Name=DKM08_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10805;old_locus_tag=DKM08_10795 NZ_QFYX01000001.1 Protein Homology CDS 2194538 2194855 . - 0 ID=cds-WP_010950685.1;Parent=gene-DKM08_RS10805;Dbxref=GenBank:WP_010950685.1;Name=WP_010950685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216790.1;locus_tag=DKM08_RS10805;product=toxin;protein_id=WP_010950685.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2194889 2195137 . - . ID=gene-DKM08_RS22145;Name=mazE8;gbkey=Gene;gene=mazE8;gene_biotype=protein_coding;locus_tag=DKM08_RS22145 NZ_QFYX01000001.1 Protein Homology CDS 2194889 2195137 . - 0 ID=cds-WP_003903832.1;Parent=gene-DKM08_RS22145;Dbxref=GenBank:WP_003903832.1;Name=WP_003903832.1;gbkey=CDS;gene=mazE8;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410963.1;locus_tag=DKM08_RS22145;product=type II toxin-antitoxin system antitoxin MazE8;protein_id=WP_003903832.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2195158 2195802 . + . ID=gene-DKM08_RS10810;Name=DKM08_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10810;old_locus_tag=DKM08_10800 NZ_QFYX01000001.1 Protein Homology CDS 2195158 2195802 . + 0 ID=cds-WP_229303148.1;Parent=gene-DKM08_RS10810;Dbxref=GenBank:WP_229303148.1;Name=WP_229303148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04539.1;locus_tag=DKM08_RS10810;product=tRNA-dependent cyclodipeptide synthase;protein_id=WP_229303148.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2195799 2196989 . + . ID=gene-DKM08_RS10815;Name=cyp121;gbkey=Gene;gene=cyp121;gene_biotype=protein_coding;locus_tag=DKM08_RS10815;old_locus_tag=DKM08_10805 NZ_QFYX01000001.1 Protein Homology CDS 2195799 2196989 . + 0 ID=cds-WP_023349556.1;Parent=gene-DKM08_RS10815;Dbxref=GenBank:WP_023349556.1;Name=WP_023349556.1;gbkey=CDS;gene=cyp121;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216792.1;locus_tag=DKM08_RS10815;product=mycocyclosin synthase Cyp121;protein_id=WP_023349556.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2197174 2198073 . - . ID=gene-DKM08_RS10820;Name=DKM08_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10820;old_locus_tag=DKM08_10810 NZ_QFYX01000001.1 Protein Homology CDS 2197174 2198073 . - 0 ID=cds-WP_003411688.1;Parent=gene-DKM08_RS10820;Dbxref=GenBank:WP_003411688.1;Name=WP_003411688.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411688.1;locus_tag=DKM08_RS10820;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003411688.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2198252 2199631 . + . ID=gene-DKM08_RS10825;Name=DKM08_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10825;old_locus_tag=DKM08_10815 NZ_QFYX01000001.1 Protein Homology CDS 2198252 2199631 . + 0 ID=cds-WP_003411690.1;Parent=gene-DKM08_RS10825;Dbxref=GenBank:WP_003411690.1;Name=WP_003411690.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293581.1;locus_tag=DKM08_RS10825;product=FAD-binding oxidoreductase;protein_id=WP_003411690.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2199865 2201523 . + . ID=gene-DKM08_RS10830;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=DKM08_RS10830;old_locus_tag=DKM08_10820 NZ_QFYX01000001.1 Protein Homology CDS 2199865 2201523 . + 0 ID=cds-WP_003411694.1;Parent=gene-DKM08_RS10830;Dbxref=GenBank:WP_003411694.1;Name=WP_003411694.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;gene=pitB;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216797.1;locus_tag=DKM08_RS10830;product=inorganic phosphate transporter;protein_id=WP_003411694.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2201630 2202568 . - . ID=gene-DKM08_RS10835;Name=DKM08_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10835;old_locus_tag=DKM08_10825 NZ_QFYX01000001.1 Protein Homology CDS 2201630 2202568 . - 0 ID=cds-WP_003411696.1;Parent=gene-DKM08_RS10835;Dbxref=GenBank:WP_003411696.1;Name=WP_003411696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216798.1;locus_tag=DKM08_RS10835;product=LysR family transcriptional regulator;protein_id=WP_003411696.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2202617 2202838 . - . ID=gene-DKM08_RS22740;Name=DKM08_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22740 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 2202617 2202838 . - 0 ID=cds-WP_413671172.1;Parent=gene-DKM08_RS22740;Dbxref=GenBank:WP_413671172.1;Name=WP_413671172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22740;product=hypothetical protein;protein_id=WP_413671172.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2202837 2204132 . + . ID=gene-DKM08_RS10845;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=DKM08_RS10845;old_locus_tag=DKM08_10835 NZ_QFYX01000001.1 Protein Homology CDS 2202837 2204132 . + 0 ID=cds-WP_003899248.1;Parent=gene-DKM08_RS10845;Dbxref=GenBank:WP_003899248.1;Name=WP_003899248.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216800.1;locus_tag=DKM08_RS10845;product=alpha/beta hydrolase;protein_id=WP_003899248.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2204165 2205502 . + . ID=gene-DKM08_RS10850;Name=DKM08_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10850;old_locus_tag=DKM08_10840 NZ_QFYX01000001.1 Protein Homology CDS 2204165 2205502 . + 0 ID=cds-WP_003411704.1;Parent=gene-DKM08_RS10850;Dbxref=GenBank:WP_003411704.1;Name=WP_003411704.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216801.1;locus_tag=DKM08_RS10850;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003411704.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2205569 2206261 . - . ID=gene-DKM08_RS21630;Name=DKM08_RS21630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21630;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2205569 2206261 . - 0 ID=cds-DKM08_RS21630;Parent=gene-DKM08_RS21630;Note=internal stop;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216802.1;locus_tag=DKM08_RS21630;product=DsbA family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2206431 2208023 . + . ID=gene-DKM08_RS10865;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=DKM08_RS10865;old_locus_tag=DKM08_10855 NZ_QFYX01000001.1 Protein Homology CDS 2206431 2208023 . + 0 ID=cds-WP_003916985.1;Parent=gene-DKM08_RS10865;Dbxref=GenBank:WP_003916985.1;Name=WP_003916985.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916985.1;locus_tag=DKM08_RS10865;product=Na+/H+ antiporter;protein_id=WP_003916985.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2208020 2208397 . + . ID=gene-DKM08_RS10870;Name=DKM08_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10870;old_locus_tag=DKM08_10860 NZ_QFYX01000001.1 Protein Homology CDS 2208020 2208397 . + 0 ID=cds-WP_003900492.1;Parent=gene-DKM08_RS10870;Dbxref=GenBank:WP_003900492.1;Name=WP_003900492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216804.1;locus_tag=DKM08_RS10870;product=hypothetical protein;protein_id=WP_003900492.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2208367 2209149 . + . ID=gene-DKM08_RS10875;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=DKM08_RS10875;old_locus_tag=DKM08_10865 NZ_QFYX01000001.1 Protein Homology CDS 2208367 2209149 . + 0 ID=cds-WP_003411717.1;Parent=gene-DKM08_RS10875;Dbxref=GenBank:WP_003411717.1;Name=WP_003411717.1;gbkey=CDS;gene=cdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216805.1;locus_tag=DKM08_RS10875;product=CDP-diacylglycerol diphosphatase;protein_id=WP_003411717.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2209291 2209805 . + . ID=gene-DKM08_RS10885;Name=lppO;gbkey=Gene;gene=lppO;gene_biotype=pseudogene;locus_tag=DKM08_RS10885;old_locus_tag=DKM08_10875;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2209291 2209805 . + 0 ID=cds-DKM08_RS10885;Parent=gene-DKM08_RS10885;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=lppO;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216806.1;locus_tag=DKM08_RS10885;product=lipoprotein LpqH;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2209865 2210719 . + . ID=gene-DKM08_RS10890;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=DKM08_RS10890;old_locus_tag=DKM08_10880 NZ_QFYX01000001.1 Protein Homology CDS 2209865 2210719 . + 0 ID=cds-WP_003411722.1;Parent=gene-DKM08_RS10890;Dbxref=GenBank:WP_003411722.1;Name=WP_003411722.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseB;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216807.1;locus_tag=DKM08_RS10890;product=sulfurtransferase;protein_id=WP_003411722.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2210720 2211694 . - . ID=gene-DKM08_RS10895;Name=DKM08_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10895;old_locus_tag=DKM08_10885 NZ_QFYX01000001.1 Protein Homology CDS 2210720 2211694 . - 0 ID=cds-WP_003901369.1;Parent=gene-DKM08_RS10895;Dbxref=GenBank:WP_003901369.1;Name=WP_003901369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901369.1;locus_tag=DKM08_RS10895;product=hypothetical protein;protein_id=WP_003901369.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2212019 2213242 . + . ID=gene-DKM08_RS10905;Name=DKM08_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10905;old_locus_tag=DKM08_10895 NZ_QFYX01000001.1 Protein Homology CDS 2212019 2213242 . + 0 ID=cds-WP_003899255.1;Parent=gene-DKM08_RS10905;Dbxref=GenBank:WP_003899255.1;Name=WP_003899255.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216810.1;locus_tag=DKM08_RS10905;product=MalY/PatB family protein;protein_id=WP_003899255.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2213465 2214103 . + . ID=gene-DKM08_RS10910;Name=DKM08_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10910;old_locus_tag=DKM08_10900 NZ_QFYX01000001.1 Protein Homology CDS 2213465 2214103 . + 0 ID=cds-WP_003899256.1;Parent=gene-DKM08_RS10910;Dbxref=GenBank:WP_003899256.1;Name=WP_003899256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216811.1;locus_tag=DKM08_RS10910;product=CbrC family protein;protein_id=WP_003899256.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2214197 2215099 . + . ID=gene-DKM08_RS10915;Name=DKM08_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10915;old_locus_tag=DKM08_10905 NZ_QFYX01000001.1 Protein Homology CDS 2214197 2215099 . + 0 ID=cds-WP_003411849.1;Parent=gene-DKM08_RS10915;Dbxref=GenBank:WP_003411849.1;Name=WP_003411849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216812.1;locus_tag=DKM08_RS10915;product=haloalkane dehalogenase;protein_id=WP_003411849.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2215131 2215583 . + . ID=gene-DKM08_RS10920;Name=DKM08_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10920;old_locus_tag=DKM08_10910 NZ_QFYX01000001.1 Protein Homology CDS 2215131 2215583 . + 0 ID=cds-WP_003411851.1;Parent=gene-DKM08_RS10920;Dbxref=GenBank:WP_003411851.1;Name=WP_003411851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216813.1;locus_tag=DKM08_RS10920;product=hypothetical protein;protein_id=WP_003411851.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2215775 2216746 . + . ID=gene-DKM08_RS10925;Name=DKM08_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10925;old_locus_tag=DKM08_10915 NZ_QFYX01000001.1 Protein Homology CDS 2215775 2216746 . + 0 ID=cds-WP_003902161.1;Parent=gene-DKM08_RS10925;Dbxref=GenBank:WP_003902161.1;Name=WP_003902161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216814.1;locus_tag=DKM08_RS10925;product=aldo/keto reductase;protein_id=WP_003902161.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2216752 2218695 . - . ID=gene-DKM08_RS10930;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=DKM08_RS10930;old_locus_tag=DKM08_10920 NZ_QFYX01000001.1 Protein Homology CDS 2216752 2218695 . - 0 ID=cds-WP_023349559.1;Parent=gene-DKM08_RS10930;Dbxref=GenBank:WP_023349559.1;Name=WP_023349559.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216815.1;locus_tag=DKM08_RS10930;product=molecular chaperone HtpG;protein_id=WP_023349559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2218769 2219551 . - . ID=gene-DKM08_RS10935;Name=DKM08_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10935;old_locus_tag=DKM08_10925 NZ_QFYX01000001.1 Protein Homology CDS 2218769 2219551 . - 0 ID=cds-WP_003911838.1;Parent=gene-DKM08_RS10935;Dbxref=GenBank:WP_003911838.1;Name=WP_003911838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911838.1;locus_tag=DKM08_RS10935;product=MBL fold metallo-hydrolase;protein_id=WP_003911838.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2219708 2220400 . + . ID=gene-DKM08_RS10940;Name=DKM08_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10940;old_locus_tag=DKM08_10930 NZ_QFYX01000001.1 Protein Homology CDS 2219708 2220400 . + 0 ID=cds-WP_003411863.1;Parent=gene-DKM08_RS10940;Dbxref=GenBank:WP_003411863.1;Name=WP_003411863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216817.2;locus_tag=DKM08_RS10940;product=cutinase family protein;protein_id=WP_003411863.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2220506 2220748 . + . ID=gene-DKM08_RS10945;Name=DKM08_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10945;old_locus_tag=DKM08_10935 NZ_QFYX01000001.1 Protein Homology CDS 2220506 2220748 . + 0 ID=cds-WP_003411866.1;Parent=gene-DKM08_RS10945;Dbxref=GenBank:WP_003411866.1;Name=WP_003411866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216818.1;locus_tag=DKM08_RS10945;product=DUF1918 domain-containing protein;protein_id=WP_003411866.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2220789 2221712 . - . ID=gene-DKM08_RS10950;Name=DKM08_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10950;old_locus_tag=DKM08_10940 NZ_QFYX01000001.1 Protein Homology CDS 2220789 2221712 . - 0 ID=cds-WP_003411868.1;Parent=gene-DKM08_RS10950;Dbxref=GenBank:WP_003411868.1;Name=WP_003411868.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216819.1;locus_tag=DKM08_RS10950;product=amidohydrolase family protein;protein_id=WP_003411868.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2221709 2221918 . - . ID=gene-DKM08_RS10955;Name=DKM08_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10955;old_locus_tag=DKM08_10945 NZ_QFYX01000001.1 Protein Homology CDS 2221709 2221918 . - 0 ID=cds-WP_003411870.1;Parent=gene-DKM08_RS10955;Dbxref=GenBank:WP_003411870.1;Name=WP_003411870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216820.1;locus_tag=DKM08_RS10955;product=hypothetical protein;protein_id=WP_003411870.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2222502 2223791 . + . ID=gene-DKM08_RS10965;Name=DKM08_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10965;old_locus_tag=DKM08_10955 NZ_QFYX01000001.1 Protein Homology CDS 2222502 2223791 . + 0 ID=cds-WP_003411871.1;Parent=gene-DKM08_RS10965;Dbxref=GenBank:WP_003411871.1;Name=WP_003411871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216821.1;locus_tag=DKM08_RS10965;product=hypothetical protein;protein_id=WP_003411871.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2223801 2224456 . + . ID=gene-DKM08_RS21845;Name=DKM08_RS21845;end_range=2224456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21845;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2223801 2224456 . + 0 ID=cds-DKM08_RS21845;Parent=gene-DKM08_RS21845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=2224456,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015305669.1;locus_tag=DKM08_RS21845;partial=true;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2224544 2225389 . - . ID=gene-DKM08_RS10975;Name=DKM08_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10975;old_locus_tag=DKM08_10970 NZ_QFYX01000001.1 Protein Homology CDS 2224544 2225389 . - 0 ID=cds-WP_003411880.1;Parent=gene-DKM08_RS10975;Dbxref=GenBank:WP_003411880.1;Name=WP_003411880.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216823.1;locus_tag=DKM08_RS10975;product=alpha/beta hydrolase;protein_id=WP_003411880.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2225546 2225890 . - . ID=gene-DKM08_RS10980;Name=DKM08_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10980;old_locus_tag=DKM08_10975 NZ_QFYX01000001.1 Protein Homology CDS 2225546 2225890 . - 0 ID=cds-WP_071854221.1;Parent=gene-DKM08_RS10980;Dbxref=GenBank:WP_071854221.1;Name=WP_071854221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024001.6;locus_tag=DKM08_RS10980;product=DUF3761 domain-containing protein;protein_id=WP_071854221.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2225921 2226112 . - . ID=gene-DKM08_RS10985;Name=DKM08_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10985;old_locus_tag=DKM08_10980 NZ_QFYX01000001.1 Protein Homology CDS 2225921 2226112 . - 0 ID=cds-WP_003899264.1;Parent=gene-DKM08_RS10985;Dbxref=GenBank:WP_003899264.1;Name=WP_003899264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177665.1;locus_tag=DKM08_RS10985;product=hypothetical protein;protein_id=WP_003899264.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2226197 2226628 . - . ID=gene-DKM08_RS10990;Name=DKM08_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10990;old_locus_tag=DKM08_10985 NZ_QFYX01000001.1 Protein Homology CDS 2226197 2226628 . - 0 ID=cds-WP_003899265.1;Parent=gene-DKM08_RS10990;Dbxref=GenBank:WP_003899265.1;Name=WP_003899265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177666.1;locus_tag=DKM08_RS10990;product=hypothetical protein;protein_id=WP_003899265.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2226721 2226903 . - . ID=gene-DKM08_RS10995;Name=DKM08_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS10995;old_locus_tag=DKM08_10990 NZ_QFYX01000001.1 Protein Homology CDS 2226721 2226903 . - 0 ID=cds-WP_003902166.1;Parent=gene-DKM08_RS10995;Dbxref=GenBank:WP_003902166.1;Name=WP_003902166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177667.1;locus_tag=DKM08_RS10995;product=hypothetical protein;protein_id=WP_003902166.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2227112 2227828 . + . ID=gene-DKM08_RS11000;Name=DKM08_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11000;old_locus_tag=DKM08_10995 NZ_QFYX01000001.1 Protein Homology CDS 2227112 2227828 . + 0 ID=cds-WP_010950692.1;Parent=gene-DKM08_RS11000;Dbxref=GenBank:WP_010950692.1;Name=WP_010950692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216824.1;locus_tag=DKM08_RS11000;product=DUF433 domain-containing protein;protein_id=WP_010950692.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2227838 2228170 . + . ID=gene-DKM08_RS11005;Name=DKM08_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11005;old_locus_tag=DKM08_11000 NZ_QFYX01000001.1 Protein Homology CDS 2227838 2228170 . + 0 ID=cds-WP_003411888.1;Parent=gene-DKM08_RS11005;Dbxref=GenBank:WP_003411888.1;Name=WP_003411888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030038.1;locus_tag=DKM08_RS11005;product=hypothetical protein;protein_id=WP_003411888.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2228457 2228530 . - . ID=gene-DKM08_RS11010;Name=DKM08_RS11010;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS11010;old_locus_tag=DKM08_11005 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2228457 2228530 . - . ID=rna-DKM08_RS11010;Parent=gene-DKM08_RS11010;anticodon=(pos:complement(2228494..2228496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11010;product=tRNA-Ile NZ_QFYX01000001.1 tRNAscan-SE exon 2228457 2228530 . - . ID=exon-DKM08_RS11010-1;Parent=rna-DKM08_RS11010;anticodon=(pos:complement(2228494..2228496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11010;product=tRNA-Ile NZ_QFYX01000001.1 RefSeq gene 2228536 2228991 . - . ID=gene-DKM08_RS11015;Name=DKM08_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11015;old_locus_tag=DKM08_11010 NZ_QFYX01000001.1 Protein Homology CDS 2228536 2228991 . - 0 ID=cds-WP_003899267.1;Parent=gene-DKM08_RS11015;Dbxref=GenBank:WP_003899267.1;Name=WP_003899267.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901373.1;locus_tag=DKM08_RS11015;product=site-specific integrase;protein_id=WP_003899267.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2229008 2229133 . - . ID=gene-DKM08_RS11020;Name=DKM08_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11020;old_locus_tag=DKM08_11015 NZ_QFYX01000001.1 Protein Homology CDS 2229008 2229133 . - 0 ID=cds-WP_003909645.1;Parent=gene-DKM08_RS11020;Dbxref=GenBank:WP_003909645.1;Name=WP_003909645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909645.1;locus_tag=DKM08_RS11020;product=hypothetical protein;protein_id=WP_003909645.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2229170 2229337 . - . ID=gene-DKM08_RS21635;Name=DKM08_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21635 NZ_QFYX01000001.1 Protein Homology CDS 2229170 2229337 . - 0 ID=cds-WP_003907913.1;Parent=gene-DKM08_RS21635;Dbxref=GenBank:WP_003907913.1;Name=WP_003907913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907913.1;locus_tag=DKM08_RS21635;product=hypothetical protein;protein_id=WP_003907913.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2229738 2230025 . + . ID=gene-DKM08_RS11030;Name=DKM08_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11030;old_locus_tag=DKM08_11025 NZ_QFYX01000001.1 Protein Homology CDS 2229738 2230025 . + 0 ID=cds-WP_010950693.1;Parent=gene-DKM08_RS11030;Dbxref=GenBank:WP_010950693.1;Name=WP_010950693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177668.1;locus_tag=DKM08_RS11030;product=hypothetical protein;protein_id=WP_010950693.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2230131 2230472 . + . ID=gene-DKM08_RS11035;Name=DKM08_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11035;old_locus_tag=DKM08_11030 NZ_QFYX01000001.1 Protein Homology CDS 2230131 2230472 . + 0 ID=cds-WP_003901374.1;Parent=gene-DKM08_RS11035;Dbxref=GenBank:WP_003901374.1;Name=WP_003901374.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901374.1;locus_tag=DKM08_RS11035;product=helix-turn-helix domain-containing protein;protein_id=WP_003901374.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2230505 2231101 . + . ID=gene-DKM08_RS11040;Name=DKM08_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11040;old_locus_tag=DKM08_11035 NZ_QFYX01000001.1 Protein Homology CDS 2230505 2231101 . + 0 ID=cds-WP_003899268.1;Parent=gene-DKM08_RS11040;Dbxref=GenBank:WP_003899268.1;Name=WP_003899268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585278.1;locus_tag=DKM08_RS11040;product=hypothetical protein;protein_id=WP_003899268.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2231179 2231448 . + . ID=gene-DKM08_RS11045;Name=DKM08_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11045;old_locus_tag=DKM08_11040 NZ_QFYX01000001.1 Protein Homology CDS 2231179 2231448 . + 0 ID=cds-WP_003411919.1;Parent=gene-DKM08_RS11045;Dbxref=GenBank:WP_003411919.1;Name=WP_003411919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216828.1;locus_tag=DKM08_RS11045;product=hypothetical protein;protein_id=WP_003411919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2231745 2232599 . - . ID=gene-DKM08_RS11050;Name=DKM08_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11050;old_locus_tag=DKM08_11045 NZ_QFYX01000001.1 Protein Homology CDS 2231745 2232599 . - 0 ID=cds-WP_003411924.1;Parent=gene-DKM08_RS11050;Dbxref=GenBank:WP_003411924.1;Name=WP_003411924.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216829.1;locus_tag=DKM08_RS11050;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003411924.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2232610 2233983 . - . ID=gene-DKM08_RS11055;Name=DKM08_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11055;old_locus_tag=DKM08_11050 NZ_QFYX01000001.1 Protein Homology CDS 2232610 2233983 . - 0 ID=cds-WP_003899270.1;Parent=gene-DKM08_RS11055;Dbxref=GenBank:WP_003899270.1;Name=WP_003899270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216830.1;locus_tag=DKM08_RS11055;product=TldD/PmbA family protein;protein_id=WP_003899270.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2233980 2235497 . - . ID=gene-DKM08_RS11060;Name=DKM08_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11060;old_locus_tag=DKM08_11055 NZ_QFYX01000001.1 Protein Homology CDS 2233980 2235497 . - 0 ID=cds-WP_003411929.1;Parent=gene-DKM08_RS11060;Dbxref=GenBank:WP_003411929.1;Name=WP_003411929.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216831.1;locus_tag=DKM08_RS11060;product=TldD/PmbA family protein;protein_id=WP_003411929.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2235531 2236403 . + . ID=gene-DKM08_RS11065;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=DKM08_RS11065;old_locus_tag=DKM08_11060 NZ_QFYX01000001.1 Protein Homology CDS 2235531 2236403 . + 0 ID=cds-WP_003411940.1;Parent=gene-DKM08_RS11065;Dbxref=GenBank:WP_003411940.1;Name=WP_003411940.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=uspA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216832.1;locus_tag=DKM08_RS11065;product=carbohydrate ABC transporter permease;protein_id=WP_003411940.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2236390 2237214 . + . ID=gene-DKM08_RS11070;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=DKM08_RS11070;old_locus_tag=DKM08_11065 NZ_QFYX01000001.1 Protein Homology CDS 2236390 2237214 . + 0 ID=cds-WP_003411946.1;Parent=gene-DKM08_RS11070;Dbxref=GenBank:WP_003411946.1;Name=WP_003411946.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=uspB;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177866.1;locus_tag=DKM08_RS11070;product=carbohydrate ABC transporter permease;protein_id=WP_003411946.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2237211 2238533 . + . ID=gene-DKM08_RS11075;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=DKM08_RS11075;old_locus_tag=DKM08_11070 NZ_QFYX01000001.1 Protein Homology CDS 2237211 2238533 . + 0 ID=cds-WP_010950694.1;Parent=gene-DKM08_RS11075;Dbxref=GenBank:WP_010950694.1;Name=WP_010950694.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=uspC;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216834.1;locus_tag=DKM08_RS11075;product=ABC transporter substrate-binding protein;protein_id=WP_010950694.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2238541 2239419 . - . ID=gene-DKM08_RS11080;Name=DKM08_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11080;old_locus_tag=DKM08_11075 NZ_QFYX01000001.1 Protein Homology CDS 2238541 2239419 . - 0 ID=cds-WP_003411952.1;Parent=gene-DKM08_RS11080;Dbxref=GenBank:WP_003411952.1;Name=WP_003411952.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216835.1;locus_tag=DKM08_RS11080;product=universal stress protein;protein_id=WP_003411952.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2239416 2240846 . - . ID=gene-DKM08_RS11085;Name=rocE;gbkey=Gene;gene=rocE;gene_biotype=protein_coding;locus_tag=DKM08_RS11085;old_locus_tag=DKM08_11080 NZ_QFYX01000001.1 Protein Homology CDS 2239416 2240846 . - 0 ID=cds-WP_003411955.1;Parent=gene-DKM08_RS11085;Dbxref=GenBank:WP_003411955.1;Name=WP_003411955.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rocE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216836.1;locus_tag=DKM08_RS11085;product=amino acid permease;protein_id=WP_003411955.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2240847 2242057 . - . ID=gene-DKM08_RS22745;Name=DKM08_RS22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22745;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2240847 2242057 . - 0 ID=cds-DKM08_RS22745;Parent=gene-DKM08_RS22745;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.6;locus_tag=DKM08_RS22745;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2242054 2242902 . - . ID=gene-DKM08_RS11100;Name=ddaH;gbkey=Gene;gene=ddaH;gene_biotype=protein_coding;locus_tag=DKM08_RS11100;old_locus_tag=DKM08_11095 NZ_QFYX01000001.1 Protein Homology CDS 2242054 2242902 . - 0 ID=cds-WP_031657274.1;Parent=gene-DKM08_RS11100;Dbxref=GenBank:WP_031657274.1;Name=WP_031657274.1;Ontology_term=GO:0016403;gbkey=CDS;gene=ddaH;go_function=dimethylargininase activity|0016403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872468.1;locus_tag=DKM08_RS11100;product=dimethylargininase;protein_id=WP_031657274.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2243027 2243473 . + . ID=gene-DKM08_RS11105;Name=DKM08_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11105;old_locus_tag=DKM08_11100 NZ_QFYX01000001.1 Protein Homology CDS 2243027 2243473 . + 0 ID=cds-WP_003411963.1;Parent=gene-DKM08_RS11105;Dbxref=GenBank:WP_003411963.1;Name=WP_003411963.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216840.1;locus_tag=DKM08_RS11105;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_003411963.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2243702 2244550 . - . ID=gene-DKM08_RS11110;Name=DKM08_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11110;old_locus_tag=DKM08_11105 NZ_QFYX01000001.1 Protein Homology CDS 2243702 2244550 . - 0 ID=cds-WP_003411966.1;Parent=gene-DKM08_RS11110;Dbxref=GenBank:WP_003411966.1;Name=WP_003411966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216841.1;locus_tag=DKM08_RS11110;product=CbiQ family ECF transporter T component;protein_id=WP_003411966.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2244547 2246595 . - . ID=gene-DKM08_RS11115;Name=DKM08_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11115;old_locus_tag=DKM08_11110 NZ_QFYX01000001.1 Protein Homology CDS 2244547 2246595 . - 0 ID=cds-WP_369810405.1;Parent=gene-DKM08_RS11115;Dbxref=GenBank:WP_369810405.1;Name=WP_369810405.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014816547.1;locus_tag=DKM08_RS11115;product=ATP-binding cassette domain-containing protein;protein_id=WP_369810405.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2246681 2247172 . + . ID=gene-DKM08_RS11120;Name=DKM08_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11120;old_locus_tag=DKM08_11115 NZ_QFYX01000001.1 Protein Homology CDS 2246681 2247172 . + 0 ID=cds-WP_003411970.1;Parent=gene-DKM08_RS11120;Dbxref=GenBank:WP_003411970.1;Name=WP_003411970.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216843.1;locus_tag=DKM08_RS11120;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003411970.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2247207 2247395 . + . ID=gene-DKM08_RS22535;Name=DKM08_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22535;old_locus_tag=DKM08_11120 NZ_QFYX01000001.1 Protein Homology CDS 2247207 2247395 . + 0 ID=cds-WP_003411971.1;Parent=gene-DKM08_RS22535;Dbxref=GenBank:WP_003411971.1;Name=WP_003411971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411971.1;locus_tag=DKM08_RS22535;product=hypothetical protein;protein_id=WP_003411971.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2247424 2248572 . + . ID=gene-DKM08_RS11130;Name=DKM08_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11130;old_locus_tag=DKM08_11125 NZ_QFYX01000001.1 Protein Homology CDS 2247424 2248572 . + 0 ID=cds-WP_003411972.1;Parent=gene-DKM08_RS11130;Dbxref=GenBank:WP_003411972.1;Name=WP_003411972.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177867.1;locus_tag=DKM08_RS11130;product=PE family protein;protein_id=WP_003411972.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2248607 2250154 . - . ID=gene-DKM08_RS11135;Name=DKM08_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11135;old_locus_tag=DKM08_11130 NZ_QFYX01000001.1 Protein Homology CDS 2248607 2250154 . - 0 ID=cds-WP_003411973.1;Parent=gene-DKM08_RS11135;Dbxref=GenBank:WP_003411973.1;Name=WP_003411973.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216845.1;locus_tag=DKM08_RS11135;product=nitrate/nitrite transporter;protein_id=WP_003411973.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2250388 2250915 . - . ID=gene-DKM08_RS11140;Name=lppP;gbkey=Gene;gene=lppP;gene_biotype=protein_coding;locus_tag=DKM08_RS11140;old_locus_tag=DKM08_11135 NZ_QFYX01000001.1 Protein Homology CDS 2250388 2250915 . - 0 ID=cds-WP_003411974.1;Parent=gene-DKM08_RS11140;Dbxref=GenBank:WP_003411974.1;Name=WP_003411974.1;gbkey=CDS;gene=lppP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216846.1;locus_tag=DKM08_RS11140;product=LppP/LprE family lipoprotein;protein_id=WP_003411974.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2250990 2251376 . + . ID=gene-DKM08_RS11145;Name=DKM08_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11145;old_locus_tag=DKM08_11140 NZ_QFYX01000001.1 Protein Homology CDS 2250990 2251376 . + 0 ID=cds-WP_003411975.1;Parent=gene-DKM08_RS11145;Dbxref=GenBank:WP_003411975.1;Name=WP_003411975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216847.1;locus_tag=DKM08_RS11145;product=hypothetical protein;protein_id=WP_003411975.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2251643 2251771 . + . ID=gene-DKM08_RS22420;Name=DKM08_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22420 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 2251643 2251771 . + 0 ID=cds-WP_003916988.1;Parent=gene-DKM08_RS22420;Dbxref=GenBank:WP_003916988.1;Name=WP_003916988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22420;product=hypothetical protein;protein_id=WP_003916988.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2251801 2253447 . + . ID=gene-DKM08_RS11155;Name=mez;gbkey=Gene;gene=mez;gene_biotype=protein_coding;locus_tag=DKM08_RS11155;old_locus_tag=DKM08_11150 NZ_QFYX01000001.1 Protein Homology CDS 2251801 2253447 . + 0 ID=cds-WP_010950697.1;Parent=gene-DKM08_RS11155;Dbxref=GenBank:WP_010950697.1;Name=WP_010950697.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;gene=mez;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216848.2;locus_tag=DKM08_RS11155;product=NAD-dependent malic enzyme;protein_id=WP_010950697.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2253401 2255015 . - . ID=gene-DKM08_RS11160;Name=stp;gbkey=Gene;gene=stp;gene_biotype=pseudogene;locus_tag=DKM08_RS11160;old_locus_tag=DKM08_11155;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2253401 2255015 . - 0 ID=cds-DKM08_RS11160;Parent=gene-DKM08_RS11160;Note=frameshifted;gbkey=CDS;gene=stp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216849.1;locus_tag=DKM08_RS11160;product=multidrug resistance protein Stp;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2255220 2255288 . + . ID=gene-DKM08_RS22750;Name=DKM08_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22750 NZ_QFYX01000001.1 Protein Homology CDS 2255220 2255288 . + 0 ID=cds-WP_306921051.1;Parent=gene-DKM08_RS22750;Dbxref=GenBank:WP_306921051.1;Name=WP_306921051.1;Note=Zero WPs at creation%2C it seemed. Model will need a rebuild once some become available. Manually created WP_306921051.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042939.1;locus_tag=DKM08_RS22750;product=Rv2334A family Cys-rich leader peptide;protein_id=WP_306921051.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2255490 2256422 . + . ID=gene-DKM08_RS11165;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=DKM08_RS11165;old_locus_tag=DKM08_11160 NZ_QFYX01000001.1 Protein Homology CDS 2255490 2256422 . + 0 ID=cds-WP_003899275.1;Parent=gene-DKM08_RS11165;Dbxref=GenBank:WP_003899275.1;Name=WP_003899275.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177868.1;locus_tag=DKM08_RS11165;product=O-acetylserine sulfhydrylase;protein_id=WP_003899275.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2256426 2257115 . + . ID=gene-DKM08_RS11170;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=DKM08_RS11170;old_locus_tag=DKM08_11165 NZ_QFYX01000001.1 Protein Homology CDS 2256426 2257115 . + 0 ID=cds-WP_003411985.1;Parent=gene-DKM08_RS11170;Dbxref=GenBank:WP_003411985.1;Name=WP_003411985.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=DKM08_RS11170;product=serine O-acetyltransferase;protein_id=WP_003411985.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2257531 2258499 . + . ID=gene-DKM08_RS11175;Name=DKM08_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11175;old_locus_tag=DKM08_11170 NZ_QFYX01000001.1 Protein Homology CDS 2257531 2258499 . + 0 ID=cds-WP_003411992.1;Parent=gene-DKM08_RS11175;Dbxref=GenBank:WP_003411992.1;Name=WP_003411992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216852.1;locus_tag=DKM08_RS11175;product=hypothetical protein;protein_id=WP_003411992.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2258563 2259681 . - . ID=gene-DKM08_RS11180;Name=DKM08_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11180;old_locus_tag=DKM08_11175 NZ_QFYX01000001.1 Protein Homology CDS 2258563 2259681 . - 0 ID=cds-WP_003412001.1;Parent=gene-DKM08_RS11180;Dbxref=GenBank:WP_003412001.1;Name=WP_003412001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216853.1;locus_tag=DKM08_RS11180;product=hypothetical protein;protein_id=WP_003412001.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2259801 2260757 . - . ID=gene-DKM08_RS11185;Name=moeW;gbkey=Gene;gene=moeW;gene_biotype=protein_coding;locus_tag=DKM08_RS11185;old_locus_tag=DKM08_11180 NZ_QFYX01000001.1 Protein Homology CDS 2259801 2260757 . - 0 ID=cds-WP_003412005.1;Parent=gene-DKM08_RS11185;Dbxref=GenBank:WP_003412005.1;Name=WP_003412005.1;gbkey=CDS;gene=moeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216854.1;locus_tag=DKM08_RS11185;product=ThiF family adenylyltransferase;protein_id=WP_003412005.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2261388 2264276 . + . ID=gene-DKM08_RS11195;Name=mmpL9;gbkey=Gene;gene=mmpL9;gene_biotype=pseudogene;locus_tag=DKM08_RS11195;old_locus_tag=DKM08_11190;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2261388 2264276 . + 0 ID=cds-DKM08_RS11195;Parent=gene-DKM08_RS11195;Note=internal stop;gbkey=CDS;gene=mmpL9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216855.1;locus_tag=DKM08_RS11195;product=RND transporter MmpL9;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2264224 2264332 . + . ID=gene-DKM08_RS11205;Name=DKM08_RS11205;end_range=2264332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS11205;old_locus_tag=DKM08_11200;partial=true;pseudo=true;start_range=.,2264224 NZ_QFYX01000001.1 Protein Homology CDS 2264224 2264332 . + 0 ID=cds-DKM08_RS11205;Parent=gene-DKM08_RS11205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2264332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=DKM08_RS11205;partial=true;product=serine O-acetyltransferase;pseudo=true;start_range=.,2264224;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2264362 2265603 . - . ID=gene-DKM08_RS11210;Name=DKM08_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11210;old_locus_tag=DKM08_11205 NZ_QFYX01000001.1 Protein Homology CDS 2264362 2265603 . - 0 ID=cds-WP_003412039.1;Parent=gene-DKM08_RS11210;Dbxref=GenBank:WP_003412039.1;Name=WP_003412039.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177869.1;locus_tag=DKM08_RS11210;product=PE family protein;protein_id=WP_003412039.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2266102 2266174 . - . ID=gene-DKM08_RS11215;Name=DKM08_RS11215;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS11215;old_locus_tag=DKM08_11210 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2266102 2266174 . - . ID=rna-DKM08_RS11215;Parent=gene-DKM08_RS11215;anticodon=(pos:complement(2266139..2266141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11215;product=tRNA-Asn NZ_QFYX01000001.1 tRNAscan-SE exon 2266102 2266174 . - . ID=exon-DKM08_RS11215-1;Parent=rna-DKM08_RS11215;anticodon=(pos:complement(2266139..2266141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11215;product=tRNA-Asn NZ_QFYX01000001.1 RefSeq gene 2266292 2266711 . + . ID=gene-DKM08_RS11220;Name=DKM08_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11220;old_locus_tag=DKM08_11215 NZ_QFYX01000001.1 Protein Homology CDS 2266292 2266711 . + 0 ID=cds-WP_003412042.1;Parent=gene-DKM08_RS11220;Dbxref=GenBank:WP_003412042.1;Name=WP_003412042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216857.1;locus_tag=DKM08_RS11220;product=hypothetical protein;protein_id=WP_003412042.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2266967 2267224 . + . ID=gene-DKM08_RS11225;Name=DKM08_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11225;old_locus_tag=DKM08_11220 NZ_QFYX01000001.1 Protein Homology CDS 2266967 2267224 . + 0 ID=cds-WP_003412045.1;Parent=gene-DKM08_RS11225;Dbxref=GenBank:WP_003412045.1;Name=WP_003412045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216858.1;locus_tag=DKM08_RS11225;product=hypothetical protein;protein_id=WP_003412045.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2267228 2269147 . - . ID=gene-DKM08_RS11230;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=DKM08_RS11230;old_locus_tag=DKM08_11225 NZ_QFYX01000001.1 Protein Homology CDS 2267228 2269147 . - 0 ID=cds-WP_003412049.1;Parent=gene-DKM08_RS11230;Dbxref=GenBank:WP_003412049.1;Name=WP_003412049.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216859.1;locus_tag=DKM08_RS11230;product=DNA primase;protein_id=WP_003412049.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2269152 2270447 . - . ID=gene-DKM08_RS11235;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=DKM08_RS11235;old_locus_tag=DKM08_11230 NZ_QFYX01000001.1 Protein Homology CDS 2269152 2270447 . - 0 ID=cds-WP_003899281.1;Parent=gene-DKM08_RS11235;Dbxref=GenBank:WP_003899281.1;Name=WP_003899281.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832,GO:0016793;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA,triphosphoric monoester hydrolase activity|0016793||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216860.1;locus_tag=DKM08_RS11235;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_003899281.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2270516 2272498 . + . ID=gene-DKM08_RS11240;Name=DKM08_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11240;old_locus_tag=DKM08_11235 NZ_QFYX01000001.1 Protein Homology CDS 2270516 2272498 . + 0 ID=cds-WP_003899282.1;Parent=gene-DKM08_RS11240;Dbxref=GenBank:WP_003899282.1;Name=WP_003899282.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216861.1;locus_tag=DKM08_RS11240;product=TPM domain-containing protein;protein_id=WP_003899282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2272583 2272771 . - . ID=gene-DKM08_RS11245;Name=DKM08_RS11245;end_range=2272771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS11245;old_locus_tag=DKM08_11240;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2272583 2272771 . - 0 ID=cds-DKM08_RS11245;Parent=gene-DKM08_RS11245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2272771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216862.1;locus_tag=DKM08_RS11245;partial=true;product=WXG100 family type VII secretion target;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2272752 2274125 . - . ID=gene-DKM08_RS22425;Name=DKM08_RS22425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22425;old_locus_tag=DKM08_11245;partial=true;pseudo=true;start_range=.,2272752 NZ_QFYX01000001.1 Protein Homology CDS 2272752 2274125 . - 0 ID=cds-DKM08_RS22425;Parent=gene-DKM08_RS22425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290607.1;locus_tag=DKM08_RS22425;partial=true;product=PPE domain-containing protein;pseudo=true;start_range=.,2272752;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2274863 2276707 . - . ID=gene-DKM08_RS11260;Name=DKM08_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11260;old_locus_tag=DKM08_11255 NZ_QFYX01000001.1 Protein Homology CDS 2274863 2276707 . - 0 ID=cds-WP_010950703.1;Parent=gene-DKM08_RS11260;Dbxref=GenBank:WP_010950703.1;Name=WP_010950703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939045.1;locus_tag=DKM08_RS11260;product=PPE family protein;protein_id=WP_010950703.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2276845 2278236 . - . ID=gene-DKM08_RS11265;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=DKM08_RS11265;old_locus_tag=DKM08_11260 NZ_QFYX01000001.1 Protein Homology CDS 2276845 2278236 . - 0 ID=cds-WP_003412200.1;Parent=gene-DKM08_RS11265;Dbxref=GenBank:WP_003412200.1;Name=WP_003412200.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;gene=glyS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216873.1;locus_tag=DKM08_RS11265;product=glycine--tRNA ligase;protein_id=WP_003412200.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2278418 2278825 . + . ID=gene-DKM08_RS11275;Name=smtB;gbkey=Gene;gene=smtB;gene_biotype=protein_coding;locus_tag=DKM08_RS11275;old_locus_tag=DKM08_11265 NZ_QFYX01000001.1 Protein Homology CDS 2278418 2278825 . + 0 ID=cds-WP_023349560.1;Parent=gene-DKM08_RS11275;Dbxref=GenBank:WP_023349560.1;Name=WP_023349560.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=smtB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216874.1;locus_tag=DKM08_RS11275;product=ArsR/SmtB family transcription factor;protein_id=WP_023349560.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2278822 2279214 . + . ID=gene-DKM08_RS11280;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=DKM08_RS11280;old_locus_tag=DKM08_11270 NZ_QFYX01000001.1 Protein Homology CDS 2278822 2279214 . + 0 ID=cds-WP_003903860.1;Parent=gene-DKM08_RS11280;Dbxref=GenBank:WP_003903860.1;Name=WP_003903860.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216875.1;locus_tag=DKM08_RS11280;product=zinc uptake transcriptional repressor Zur;protein_id=WP_003903860.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2279322 2279750 . - . ID=gene-DKM08_RS11285;Name=DKM08_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11285;old_locus_tag=DKM08_11275 NZ_QFYX01000001.1 Protein Homology CDS 2279322 2279750 . - 0 ID=cds-WP_003412208.1;Parent=gene-DKM08_RS11285;Dbxref=GenBank:WP_003412208.1;Name=WP_003412208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216876.1;locus_tag=DKM08_RS11285;product=hypothetical protein;protein_id=WP_003412208.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2279750 2280640 . - . ID=gene-DKM08_RS11290;Name=DKM08_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11290;old_locus_tag=DKM08_11280 NZ_QFYX01000001.1 Protein Homology CDS 2279750 2280640 . - 0 ID=cds-WP_003412212.1;Parent=gene-DKM08_RS11290;Dbxref=GenBank:WP_003412212.1;Name=WP_003412212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216877.1;locus_tag=DKM08_RS11290;product=decaprenyl diphosphate synthase;protein_id=WP_003412212.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2280633 2281430 . - . ID=gene-DKM08_RS11295;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=DKM08_RS11295;old_locus_tag=DKM08_11285 NZ_QFYX01000001.1 Protein Homology CDS 2280633 2281430 . - 0 ID=cds-WP_003412222.1;Parent=gene-DKM08_RS11295;Dbxref=GenBank:WP_003412222.1;Name=WP_003412222.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216878.1;locus_tag=DKM08_RS11295;product=DNA repair protein RecO;protein_id=WP_003412222.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2281492 2282946 . + . ID=gene-DKM08_RS11300;Name=DKM08_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11300;old_locus_tag=DKM08_11290 NZ_QFYX01000001.1 Protein Homology CDS 2281492 2282946 . + 0 ID=cds-WP_003412223.1;Parent=gene-DKM08_RS11300;Dbxref=GenBank:WP_003412223.1;Name=WP_003412223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216879.1;locus_tag=DKM08_RS11300;product=amidase;protein_id=WP_003412223.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2282943 2283845 . - . ID=gene-DKM08_RS11305;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=DKM08_RS11305;old_locus_tag=DKM08_11295 NZ_QFYX01000001.1 Protein Homology CDS 2282943 2283845 . - 0 ID=cds-WP_003412224.1;Parent=gene-DKM08_RS11305;Dbxref=GenBank:WP_003412224.1;Name=WP_003412224.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177873.1;locus_tag=DKM08_RS11305;product=GTPase Era;protein_id=WP_003412224.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2283919 2284260 . - . ID=gene-DKM08_RS11310;Name=DKM08_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11310;old_locus_tag=DKM08_11300 NZ_QFYX01000001.1 Protein Homology CDS 2283919 2284260 . - 0 ID=cds-WP_003412226.1;Parent=gene-DKM08_RS11310;Dbxref=GenBank:WP_003412226.1;Name=WP_003412226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216881.1;locus_tag=DKM08_RS11310;product=hypothetical protein;protein_id=WP_003412226.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2284232 2285539 . - . ID=gene-DKM08_RS11315;Name=DKM08_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11315;old_locus_tag=DKM08_11305 NZ_QFYX01000001.1 Protein Homology CDS 2284232 2285539 . - 0 ID=cds-WP_023349561.1;Parent=gene-DKM08_RS11315;Dbxref=GenBank:WP_023349561.1;Name=WP_023349561.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216882.1;locus_tag=DKM08_RS11315;product=hemolysin family protein;protein_id=WP_023349561.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2285536 2286069 . - . ID=gene-DKM08_RS11320;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=DKM08_RS11320;old_locus_tag=DKM08_11310 NZ_QFYX01000001.1 Protein Homology CDS 2285536 2286069 . - 0 ID=cds-WP_003899292.1;Parent=gene-DKM08_RS11320;Dbxref=GenBank:WP_003899292.1;Name=WP_003899292.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412232.1;locus_tag=DKM08_RS11320;product=rRNA maturation RNase YbeY;protein_id=WP_003899292.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2286088 2287146 . - . ID=gene-DKM08_RS11325;Name=DKM08_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11325;old_locus_tag=DKM08_11315 NZ_QFYX01000001.1 Protein Homology CDS 2286088 2287146 . - 0 ID=cds-WP_003412235.1;Parent=gene-DKM08_RS11325;Dbxref=GenBank:WP_003412235.1;Name=WP_003412235.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177874.1;locus_tag=DKM08_RS11325;product=PhoH family protein;protein_id=WP_003412235.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2287118 2287420 . - . ID=gene-DKM08_RS11330;Name=DKM08_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11330;old_locus_tag=DKM08_11320 NZ_QFYX01000001.1 Protein Homology CDS 2287118 2287420 . - 0 ID=cds-WP_003902257.1;Parent=gene-DKM08_RS11330;Dbxref=GenBank:WP_003902257.1;Name=WP_003902257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216885.1;locus_tag=DKM08_RS11330;product=hypothetical protein;protein_id=WP_003902257.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2287417 2288730 . - . ID=gene-DKM08_RS11335;Name=DKM08_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11335;old_locus_tag=DKM08_11325 NZ_QFYX01000001.1 Protein Homology CDS 2287417 2288730 . - 0 ID=cds-WP_003899293.1;Parent=gene-DKM08_RS11335;Dbxref=GenBank:WP_003899293.1;Name=WP_003899293.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216886.1;locus_tag=DKM08_RS11335;product=PucR family transcriptional regulator;protein_id=WP_003899293.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2288925 2289107 . + . ID=gene-DKM08_RS22160;Name=DKM08_RS22160;end_range=2289107,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22160;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2288925 2289107 . + 0 ID=cds-DKM08_RS22160;Parent=gene-DKM08_RS22160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=2289107,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177812.1;locus_tag=DKM08_RS22160;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2289209 2289997 . - . ID=gene-DKM08_RS11345;Name=DKM08_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11345;old_locus_tag=DKM08_11335 NZ_QFYX01000001.1 Protein Homology CDS 2289209 2289997 . - 0 ID=cds-WP_003900509.1;Parent=gene-DKM08_RS11345;Dbxref=GenBank:WP_003900509.1;Name=WP_003900509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216888.1;locus_tag=DKM08_RS11345;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_003900509.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2290011 2291159 . - . ID=gene-DKM08_RS11350;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=DKM08_RS11350;old_locus_tag=DKM08_11340 NZ_QFYX01000001.1 Protein Homology CDS 2290011 2291159 . - 0 ID=cds-WP_003899294.1;Parent=gene-DKM08_RS11350;Dbxref=GenBank:WP_003899294.1;Name=WP_003899294.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216889.1;locus_tag=DKM08_RS11350;product=molecular chaperone DnaJ;protein_id=WP_003899294.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2291234 2292265 . - . ID=gene-DKM08_RS11355;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=DKM08_RS11355;old_locus_tag=DKM08_11345 NZ_QFYX01000001.1 Protein Homology CDS 2291234 2292265 . - 0 ID=cds-WP_003412252.1;Parent=gene-DKM08_RS11355;Dbxref=GenBank:WP_003412252.1;Name=WP_003412252.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216890.1;locus_tag=DKM08_RS11355;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_003412252.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2292437 2292754 . + . ID=gene-DKM08_RS11360;Name=DKM08_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11360;old_locus_tag=DKM08_11350 NZ_QFYX01000001.1 Protein Homology CDS 2292437 2292754 . + 0 ID=cds-WP_003412258.1;Parent=gene-DKM08_RS11360;Dbxref=GenBank:WP_003412258.1;Name=WP_003412258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216891.1;locus_tag=DKM08_RS11360;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003412258.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2292781 2293287 . - . ID=gene-DKM08_RS11365;Name=DKM08_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11365;old_locus_tag=DKM08_11355 NZ_QFYX01000001.1 Protein Homology CDS 2292781 2293287 . - 0 ID=cds-WP_003412264.1;Parent=gene-DKM08_RS11365;Dbxref=GenBank:WP_003412264.1;Name=WP_003412264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216892.1;locus_tag=DKM08_RS11365;product=Low molecular weight antigen MTB12;protein_id=WP_003412264.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2293387 2293602 . - . ID=gene-DKM08_RS11370;Name=mbtH;gbkey=Gene;gene=mbtH;gene_biotype=protein_coding;locus_tag=DKM08_RS11370;old_locus_tag=DKM08_11360 NZ_QFYX01000001.1 Protein Homology CDS 2293387 2293602 . - 0 ID=cds-WP_003412265.1;Parent=gene-DKM08_RS11370;Dbxref=GenBank:WP_003412265.1;Name=WP_003412265.1;gbkey=CDS;gene=mbtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216893.1;locus_tag=DKM08_RS11370;product=mycobactin NRPS accessory protein MbtH;protein_id=WP_003412265.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2293580 2294875 . - . ID=gene-DKM08_RS11375;Name=mbtG;gbkey=Gene;gene=mbtG;gene_biotype=protein_coding;locus_tag=DKM08_RS11375;old_locus_tag=DKM08_11365 NZ_QFYX01000001.1 Protein Homology CDS 2293580 2294875 . - 0 ID=cds-WP_003899296.1;Parent=gene-DKM08_RS11375;Dbxref=GenBank:WP_003899296.1;Name=WP_003899296.1;gbkey=CDS;gene=mbtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216894.1;locus_tag=DKM08_RS11375;product=NADPH-dependent L-lysine N(6)-monooxygenase MbtG;protein_id=WP_003899296.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2294872 2299242 . - . ID=gene-DKM08_RS11380;Name=mbtF;gbkey=Gene;gene=mbtF;gene_biotype=protein_coding;locus_tag=DKM08_RS11380;old_locus_tag=DKM08_11370 NZ_QFYX01000001.1 Protein Homology CDS 2294872 2299242 . - 0 ID=cds-WP_031657277.1;Parent=gene-DKM08_RS11380;Dbxref=GenBank:WP_031657277.1;Name=WP_031657277.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtF;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917623.1;locus_tag=DKM08_RS11380;product=mycobactin non-ribosomal peptide synthetase MbtF;protein_id=WP_031657277.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2299239 2304434 . - . ID=gene-DKM08_RS11385;Name=mbtE;gbkey=Gene;gene=mbtE;gene_biotype=protein_coding;locus_tag=DKM08_RS11385;old_locus_tag=DKM08_11375 NZ_QFYX01000001.1 Protein Homology CDS 2299239 2304434 . - 0 ID=cds-WP_003899297.1;Parent=gene-DKM08_RS11385;Dbxref=GenBank:WP_003899297.1;Name=WP_003899297.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtE;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899297.1;locus_tag=DKM08_RS11385;product=mycobactin non-ribosomal peptide synthetase MbtE;protein_id=WP_003899297.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2304427 2307441 . - . ID=gene-DKM08_RS11390;Name=mbtD;gbkey=Gene;gene=mbtD;gene_biotype=protein_coding;locus_tag=DKM08_RS11390;old_locus_tag=DKM08_11380 NZ_QFYX01000001.1 Protein Homology CDS 2304427 2307441 . - 0 ID=cds-WP_003412277.1;Parent=gene-DKM08_RS11390;Dbxref=GenBank:WP_003412277.1;Name=WP_003412277.1;gbkey=CDS;gene=mbtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216897.1;locus_tag=DKM08_RS11390;product=mycobactin polyketide synthase MbtD;protein_id=WP_003412277.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2307441 2308775 . - . ID=gene-DKM08_RS11395;Name=mbtC;gbkey=Gene;gene=mbtC;gene_biotype=protein_coding;locus_tag=DKM08_RS11395;old_locus_tag=DKM08_11385 NZ_QFYX01000001.1 Protein Homology CDS 2307441 2308775 . - 0 ID=cds-WP_003412278.1;Parent=gene-DKM08_RS11395;Dbxref=GenBank:WP_003412278.1;Name=WP_003412278.1;gbkey=CDS;gene=mbtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216898.1;locus_tag=DKM08_RS11395;product=polyketide synthetase MbtC;protein_id=WP_003412278.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2308765 2313009 . - . ID=gene-DKM08_RS11400;Name=mbtB;gbkey=Gene;gene=mbtB;gene_biotype=protein_coding;locus_tag=DKM08_RS11400;old_locus_tag=DKM08_11390 NZ_QFYX01000001.1 Protein Homology CDS 2308765 2313009 . - 0 ID=cds-WP_010950705.1;Parent=gene-DKM08_RS11400;Dbxref=GenBank:WP_010950705.1;Name=WP_010950705.1;gbkey=CDS;gene=mbtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216899.1;locus_tag=DKM08_RS11400;product=phenyloxazoline synthase MbtB;protein_id=WP_010950705.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2313108 2314805 . + . ID=gene-DKM08_RS11405;Name=mbtA;gbkey=Gene;gene=mbtA;gene_biotype=protein_coding;locus_tag=DKM08_RS11405;old_locus_tag=DKM08_11395 NZ_QFYX01000001.1 Protein Homology CDS 2313108 2314805 . + 0 ID=cds-WP_003412282.1;Parent=gene-DKM08_RS11405;Dbxref=GenBank:WP_003412282.1;Name=WP_003412282.1;gbkey=CDS;gene=mbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216900.1;locus_tag=DKM08_RS11405;product=bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase MbtA;protein_id=WP_003412282.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2314838 2315821 . + . ID=gene-DKM08_RS11410;Name=mbtJ;gbkey=Gene;gene=mbtJ;gene_biotype=protein_coding;gene_synonym=lipK;locus_tag=DKM08_RS11410;old_locus_tag=DKM08_11400 NZ_QFYX01000001.1 Protein Homology CDS 2314838 2315821 . + 0 ID=cds-WP_003899300.1;Parent=gene-DKM08_RS11410;Dbxref=GenBank:WP_003899300.1;Name=WP_003899300.1;gbkey=CDS;gene=mbtJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899300.1;locus_tag=DKM08_RS11410;product=acetyl hydrolase/esterase MbtJ;protein_id=WP_003899300.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2315825 2317177 . - . ID=gene-DKM08_RS11415;Name=mbtI;gbkey=Gene;gene=mbtI;gene_biotype=protein_coding;locus_tag=DKM08_RS11415;old_locus_tag=DKM08_11405 NZ_QFYX01000001.1 Protein Homology CDS 2315825 2317177 . - 0 ID=cds-WP_003412287.1;Parent=gene-DKM08_RS11415;Dbxref=GenBank:WP_003412287.1;Name=WP_003412287.1;gbkey=CDS;gene=mbtI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177877.1;locus_tag=DKM08_RS11415;product=mycobactin biosynthesis salicylate synthase MbtI;protein_id=WP_003412287.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2317630 2317839 . + . ID=gene-DKM08_RS11420;Name=DKM08_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11420;old_locus_tag=DKM08_11410 NZ_QFYX01000001.1 Protein Homology CDS 2317630 2317839 . + 0 ID=cds-WP_003899302.1;Parent=gene-DKM08_RS11420;Dbxref=GenBank:WP_003899302.1;Name=WP_003899302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030039.1;locus_tag=DKM08_RS11420;product=hypothetical protein;protein_id=WP_003899302.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2317937 2319190 . + . ID=gene-DKM08_RS11425;Name=DKM08_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11425;old_locus_tag=DKM08_11415 NZ_QFYX01000001.1 Protein Homology CDS 2317937 2319190 . + 0 ID=cds-WP_003412289.1;Parent=gene-DKM08_RS11425;Dbxref=GenBank:WP_003412289.1;Name=WP_003412289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216903.1;locus_tag=DKM08_RS11425;product=sodium-dependent bicarbonate transport family permease;protein_id=WP_003412289.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2319187 2320359 . - . ID=gene-DKM08_RS11430;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=DKM08_RS11430;old_locus_tag=DKM08_11420 NZ_QFYX01000001.1 Protein Homology CDS 2319187 2320359 . - 0 ID=cds-WP_015385289.1;Parent=gene-DKM08_RS11430;Dbxref=GenBank:WP_015385289.1;Name=WP_015385289.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631433.1;locus_tag=DKM08_RS11430;product=radical SAM family heme chaperone HemW;protein_id=WP_015385289.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2320420 2320884 . - . ID=gene-DKM08_RS11435;Name=rpfD;gbkey=Gene;gene=rpfD;gene_biotype=protein_coding;locus_tag=DKM08_RS11435;old_locus_tag=DKM08_11425 NZ_QFYX01000001.1 Protein Homology CDS 2320420 2320884 . - 0 ID=cds-WP_003412293.1;Parent=gene-DKM08_RS11435;Dbxref=GenBank:WP_003412293.1;Name=WP_003412293.1;gbkey=CDS;gene=rpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216905.1;locus_tag=DKM08_RS11435;product=resuscitation-promoting factor protein RpfD;protein_id=WP_003412293.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2320881 2321438 . - . ID=gene-DKM08_RS11440;Name=DKM08_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11440;old_locus_tag=DKM08_11430 NZ_QFYX01000001.1 Protein Homology CDS 2320881 2321438 . - 0 ID=cds-WP_023349562.1;Parent=gene-DKM08_RS11440;Dbxref=GenBank:WP_023349562.1;Name=WP_023349562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216906.1;locus_tag=DKM08_RS11440;product=hypothetical protein;protein_id=WP_023349562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2321704 2321760 . + . ID=gene-DKM08_RS22755;Name=DKM08_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22755 NZ_QFYX01000001.1 Protein Homology CDS 2321704 2321760 . + 0 ID=cds-WP_349814673.1;Parent=gene-DKM08_RS22755;Dbxref=GenBank:WP_349814673.1;Name=WP_349814673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042936.1;locus_tag=DKM08_RS22755;product=Ms4527A family Cys-rich leader peptide;protein_id=WP_349814673.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2321875 2323542 . + . ID=gene-DKM08_RS11445;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;locus_tag=DKM08_RS11445;old_locus_tag=DKM08_11435 NZ_QFYX01000001.1 Protein Homology CDS 2321875 2323542 . + 0 ID=cds-WP_003899303.1;Parent=gene-DKM08_RS11445;Dbxref=GenBank:WP_003899303.1;Name=WP_003899303.1;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899303.1;locus_tag=DKM08_RS11445;product=sulfite reductase SirA;protein_id=WP_003899303.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2323539 2324303 . + . ID=gene-DKM08_RS11450;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=DKM08_RS11450;old_locus_tag=DKM08_11440 NZ_QFYX01000001.1 Protein Homology CDS 2323539 2324303 . + 0 ID=cds-WP_003412303.1;Parent=gene-DKM08_RS11450;Dbxref=GenBank:WP_003412303.1;Name=WP_003412303.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;gene=cysH;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216908.1;locus_tag=DKM08_RS11450;product=phosphoadenylyl-sulfate reductase;protein_id=WP_003412303.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2324333 2325199 . + . ID=gene-DKM08_RS11455;Name=DKM08_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11455;old_locus_tag=DKM08_11445 NZ_QFYX01000001.1 Protein Homology CDS 2324333 2325199 . + 0 ID=cds-WP_003903876.1;Parent=gene-DKM08_RS11455;Dbxref=GenBank:WP_003903876.1;Name=WP_003903876.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903876.1;locus_tag=DKM08_RS11455;product=sirohydrochlorin chelatase;protein_id=WP_003903876.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2325236 2327167 . + . ID=gene-DKM08_RS11460;Name=ggtB;gbkey=Gene;gene=ggtB;gene_biotype=protein_coding;locus_tag=DKM08_RS11460;old_locus_tag=DKM08_11450 NZ_QFYX01000001.1 Protein Homology CDS 2325236 2327167 . + 0 ID=cds-WP_003412309.1;Parent=gene-DKM08_RS11460;Dbxref=GenBank:WP_003412309.1;Name=WP_003412309.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ggtB;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216910.1;locus_tag=DKM08_RS11460;product=gamma-glutamyltransferase family protein;protein_id=WP_003412309.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2327298 2329302 . + . ID=gene-DKM08_RS11465;Name=DKM08_RS11465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS11465;old_locus_tag=DKM08_11455;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2327298 2329302 . + 0 ID=cds-DKM08_RS11465;Parent=gene-DKM08_RS11465;Note=frameshifted;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216911.1;locus_tag=DKM08_RS11465;product=OPT family oligopeptide transporter;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2329451 2329666 . + . ID=gene-DKM08_RS11470;Name=aprA;gbkey=Gene;gene=aprA;gene_biotype=protein_coding;locus_tag=DKM08_RS11470;old_locus_tag=DKM08_11460 NZ_QFYX01000001.1 Protein Homology CDS 2329451 2329666 . + 0 ID=cds-WP_003899306.1;Parent=gene-DKM08_RS11470;Dbxref=GenBank:WP_003899306.1;Name=WP_003899306.1;gbkey=CDS;gene=aprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411091.1;locus_tag=DKM08_RS11470;product=acid and phagosome regulated protein AprA;protein_id=WP_003899306.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2329778 2329942 . + . ID=gene-DKM08_RS11475;Name=aprB;gbkey=Gene;gene=aprB;gene_biotype=protein_coding;locus_tag=DKM08_RS11475;old_locus_tag=DKM08_11465 NZ_QFYX01000001.1 Protein Homology CDS 2329778 2329942 . + 0 ID=cds-WP_003907942.1;Parent=gene-DKM08_RS11475;Dbxref=GenBank:WP_003907942.1;Name=WP_003907942.1;gbkey=CDS;gene=aprB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411092.1;locus_tag=DKM08_RS11475;product=acid and phagosome regulated protein AprB;protein_id=WP_003907942.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2330026 2331108 . + . ID=gene-DKM08_RS11480;Name=DKM08_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11480;old_locus_tag=DKM08_11470 NZ_QFYX01000001.1 Protein Homology CDS 2330026 2331108 . + 0 ID=cds-WP_147020913.1;Parent=gene-DKM08_RS11480;Dbxref=GenBank:WP_147020913.1;Name=WP_147020913.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177878.1;locus_tag=DKM08_RS11480;product=PE family protein;protein_id=WP_147020913.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2331133 2332188 . - . ID=gene-DKM08_RS11485;Name=DKM08_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11485;old_locus_tag=DKM08_11475 NZ_QFYX01000001.1 Protein Homology CDS 2331133 2332188 . - 0 ID=cds-WP_003412325.1;Parent=gene-DKM08_RS11485;Dbxref=GenBank:WP_003412325.1;Name=WP_003412325.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177879.1;locus_tag=DKM08_RS11485;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003412325.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2332205 2333023 . - . ID=gene-DKM08_RS11490;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=DKM08_RS11490;old_locus_tag=DKM08_11480 NZ_QFYX01000001.1 Protein Homology CDS 2332205 2333023 . - 0 ID=cds-WP_003412329.1;Parent=gene-DKM08_RS11490;Dbxref=GenBank:WP_003412329.1;Name=WP_003412329.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216914.1;locus_tag=DKM08_RS11490;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_003412329.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2333020 2333871 . - . ID=gene-DKM08_RS11495;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=DKM08_RS11495;old_locus_tag=DKM08_11485 NZ_QFYX01000001.1 Protein Homology CDS 2333020 2333871 . - 0 ID=cds-WP_003412332.1;Parent=gene-DKM08_RS11495;Dbxref=GenBank:WP_003412332.1;Name=WP_003412332.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216915.1;locus_tag=DKM08_RS11495;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_003412332.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2333868 2334938 . - . ID=gene-DKM08_RS11500;Name=subI;gbkey=Gene;gene=subI;gene_biotype=protein_coding;locus_tag=DKM08_RS11500;old_locus_tag=DKM08_11490 NZ_QFYX01000001.1 Protein Homology CDS 2333868 2334938 . - 0 ID=cds-WP_003412335.1;Parent=gene-DKM08_RS11500;Dbxref=GenBank:WP_003412335.1;Name=WP_003412335.1;gbkey=CDS;gene=subI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216916.1;locus_tag=DKM08_RS11500;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_003412335.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2334952 2335281 . + . ID=gene-DKM08_RS11505;Name=DKM08_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11505;old_locus_tag=DKM08_11495 NZ_QFYX01000001.1 Protein Homology CDS 2334952 2335281 . + 0 ID=cds-WP_003900513.1;Parent=gene-DKM08_RS11505;Dbxref=GenBank:WP_003900513.1;Name=WP_003900513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216917.2;locus_tag=DKM08_RS11505;product=hypothetical protein;protein_id=WP_003900513.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2335266 2335469 . - . ID=gene-DKM08_RS11510;Name=DKM08_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11510;old_locus_tag=DKM08_11500 NZ_QFYX01000001.1 Protein Homology CDS 2335266 2335469 . - 0 ID=cds-WP_003412337.1;Parent=gene-DKM08_RS11510;Dbxref=GenBank:WP_003412337.1;Name=WP_003412337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177670.1;locus_tag=DKM08_RS11510;product=hypothetical protein;protein_id=WP_003412337.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2335639 2337681 . + . ID=gene-DKM08_RS11515;Name=DKM08_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11515;old_locus_tag=DKM08_11505 NZ_QFYX01000001.1 Protein Homology CDS 2335639 2337681 . + 0 ID=cds-WP_003913344.1;Parent=gene-DKM08_RS11515;Dbxref=GenBank:WP_003913344.1;Name=WP_003913344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875915.1;locus_tag=DKM08_RS11515;product=glycoside hydrolase family 15 protein;protein_id=WP_003913344.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2337759 2338514 . - . ID=gene-DKM08_RS11520;Name=lppR;gbkey=Gene;gene=lppR;gene_biotype=protein_coding;locus_tag=DKM08_RS11520;old_locus_tag=DKM08_11510 NZ_QFYX01000001.1 Protein Homology CDS 2337759 2338514 . - 0 ID=cds-WP_010950712.1;Parent=gene-DKM08_RS11520;Dbxref=GenBank:WP_010950712.1;Name=WP_010950712.1;gbkey=CDS;gene=lppR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216919.1;locus_tag=DKM08_RS11520;product=sensor domain-containing protein;protein_id=WP_010950712.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2338511 2340472 . - . ID=gene-DKM08_RS11525;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=DKM08_RS11525;old_locus_tag=DKM08_11515 NZ_QFYX01000001.1 Protein Homology CDS 2338511 2340472 . - 0 ID=cds-WP_003900516.1;Parent=gene-DKM08_RS11525;Dbxref=GenBank:WP_003900516.1;Name=WP_003900516.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216920.1;locus_tag=DKM08_RS11525;product=translation elongation factor 4;protein_id=WP_003900516.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2340460 2341062 . + . ID=gene-DKM08_RS11530;Name=DKM08_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11530;old_locus_tag=DKM08_11520 NZ_QFYX01000001.1 Protein Homology CDS 2340460 2341062 . + 0 ID=cds-WP_003899311.1;Parent=gene-DKM08_RS11530;Dbxref=GenBank:WP_003899311.1;Name=WP_003899311.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899311.1;locus_tag=DKM08_RS11530;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003899311.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2341233 2341661 . - . ID=gene-DKM08_RS11535;Name=DKM08_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11535;old_locus_tag=DKM08_11525 NZ_QFYX01000001.1 Protein Homology CDS 2341233 2341661 . - 0 ID=cds-WP_003412347.1;Parent=gene-DKM08_RS11535;Dbxref=GenBank:WP_003412347.1;Name=WP_003412347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216922.1;locus_tag=DKM08_RS11535;product=CBS domain-containing protein;protein_id=WP_003412347.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2341690 2341827 . - . ID=gene-DKM08_RS21850;Name=DKM08_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21850 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 2341690 2341827 . - 0 ID=cds-WP_015456387.1;Parent=gene-DKM08_RS21850;Dbxref=GenBank:WP_015456387.1;Name=WP_015456387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21850;product=hypothetical protein;protein_id=WP_015456387.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2341921 2342763 . + . ID=gene-DKM08_RS11540;Name=DKM08_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11540;old_locus_tag=DKM08_11530 NZ_QFYX01000001.1 Protein Homology CDS 2341921 2342763 . + 0 ID=cds-WP_003412350.1;Parent=gene-DKM08_RS11540;Dbxref=GenBank:WP_003412350.1;Name=WP_003412350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216923.1;locus_tag=DKM08_RS11540;product=Rv2407 family type 3 sulfatase;protein_id=WP_003412350.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2343404 2343607 . + . ID=gene-DKM08_RS22165;Name=DKM08_RS22165;end_range=2343607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22165;old_locus_tag=DKM08_11540;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2343404 2343607 . + 0 ID=cds-DKM08_RS22165;Parent=gene-DKM08_RS22165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=2343607,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=DKM08_RS22165;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2343833 2344672 . - . ID=gene-DKM08_RS11555;Name=DKM08_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11555;old_locus_tag=DKM08_11545 NZ_QFYX01000001.1 Protein Homology CDS 2343833 2344672 . - 0 ID=cds-WP_003412357.1;Parent=gene-DKM08_RS11555;Dbxref=GenBank:WP_003412357.1;Name=WP_003412357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216925.1;locus_tag=DKM08_RS11555;product=transglutaminase-like domain-containing protein;protein_id=WP_003412357.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2344672 2345649 . - . ID=gene-DKM08_RS11560;Name=DKM08_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11560;old_locus_tag=DKM08_11550 NZ_QFYX01000001.1 Protein Homology CDS 2344672 2345649 . - 0 ID=cds-WP_003412359.1;Parent=gene-DKM08_RS11560;Dbxref=GenBank:WP_003412359.1;Name=WP_003412359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216926.1;locus_tag=DKM08_RS11560;product=alpha-E domain-containing protein;protein_id=WP_003412359.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2345649 2347304 . - . ID=gene-DKM08_RS11565;Name=DKM08_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11565;old_locus_tag=DKM08_11555 NZ_QFYX01000001.1 Protein Homology CDS 2345649 2347304 . - 0 ID=cds-WP_003412363.1;Parent=gene-DKM08_RS11565;Dbxref=GenBank:WP_003412363.1;Name=WP_003412363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216927.1;locus_tag=DKM08_RS11565;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003412363.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2347414 2347674 . + . ID=gene-DKM08_RS11570;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=DKM08_RS11570;old_locus_tag=DKM08_11560 NZ_QFYX01000001.1 Protein Homology CDS 2347414 2347674 . + 0 ID=cds-WP_003899314.1;Parent=gene-DKM08_RS11570;Dbxref=GenBank:WP_003899314.1;Name=WP_003899314.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216928.1;locus_tag=DKM08_RS11570;product=30S ribosomal protein S20;protein_id=WP_003899314.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2347690 2348640 . - . ID=gene-DKM08_RS11575;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=DKM08_RS11575;old_locus_tag=DKM08_11565 NZ_QFYX01000001.1 Protein Homology CDS 2347690 2348640 . - 0 ID=cds-WP_003903885.1;Parent=gene-DKM08_RS11575;Dbxref=GenBank:WP_003903885.1;Name=WP_003903885.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216929.3;locus_tag=DKM08_RS11575;product=DNA polymerase III subunit delta;protein_id=WP_003903885.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2348671 2350215 . - . ID=gene-DKM08_RS11580;Name=DKM08_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11580;old_locus_tag=DKM08_11570 NZ_QFYX01000001.1 Protein Homology CDS 2348671 2350215 . - 0 ID=cds-WP_003412371.1;Parent=gene-DKM08_RS11580;Dbxref=GenBank:WP_003412371.1;Name=WP_003412371.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216930.1;locus_tag=DKM08_RS11580;product=ComEC/Rec2 family competence protein;protein_id=WP_003412371.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2350230 2351123 . - . ID=gene-DKM08_RS11585;Name=DKM08_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11585;old_locus_tag=DKM08_11575 NZ_QFYX01000001.1 Protein Homology CDS 2350230 2351123 . - 0 ID=cds-WP_003412373.1;Parent=gene-DKM08_RS11585;Dbxref=GenBank:WP_003412373.1;Name=WP_003412373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216931.1;locus_tag=DKM08_RS11585;product=ComEA family DNA-binding protein;protein_id=WP_003412373.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2351463 2352689 . - . ID=gene-DKM08_RS11590;Name=eis;gbkey=Gene;gene=eis;gene_biotype=protein_coding;locus_tag=DKM08_RS11590;old_locus_tag=DKM08_11580 NZ_QFYX01000001.1 Protein Homology CDS 2351463 2352689 . - 0 ID=cds-WP_010950714.1;Parent=gene-DKM08_RS11590;Dbxref=GenBank:WP_010950714.1;Name=WP_010950714.1;gbkey=CDS;gene=eis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950714.1;locus_tag=DKM08_RS11590;product=enhanced intracellular survival protein Eis;protein_id=WP_010950714.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2352811 2353653 . - . ID=gene-DKM08_RS11595;Name=DKM08_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11595;old_locus_tag=DKM08_11585 NZ_QFYX01000001.1 Protein Homology CDS 2352811 2353653 . - 0 ID=cds-WP_003412381.1;Parent=gene-DKM08_RS11595;Dbxref=GenBank:WP_003412381.1;Name=WP_003412381.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216933.1;locus_tag=DKM08_RS11595;product=DegV family protein;protein_id=WP_003412381.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2353734 2354477 . - . ID=gene-DKM08_RS11600;Name=octT;gbkey=Gene;gene=octT;gene_biotype=protein_coding;locus_tag=DKM08_RS11600;old_locus_tag=DKM08_11590 NZ_QFYX01000001.1 Protein Homology CDS 2353734 2354477 . - 0 ID=cds-WP_003412384.1;Parent=gene-DKM08_RS11600;Dbxref=GenBank:WP_003412384.1;Name=WP_003412384.1;Ontology_term=GO:0016414;gbkey=CDS;gene=octT;go_function=diglucosylglycerate octanoyltransferase activity|0016414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216934.1;locus_tag=DKM08_RS11600;product=diglucosylglycerate octanoyltransferase;protein_id=WP_003412384.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2354467 2355138 . - . ID=gene-DKM08_RS11605;Name=gpgP;gbkey=Gene;gene=gpgP;gene_biotype=protein_coding;locus_tag=DKM08_RS11605;old_locus_tag=DKM08_11595 NZ_QFYX01000001.1 Protein Homology CDS 2354467 2355138 . - 0 ID=cds-WP_010950715.1;Parent=gene-DKM08_RS11605;Dbxref=GenBank:WP_010950715.1;Name=WP_010950715.1;gbkey=CDS;gene=gpgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216935.1;locus_tag=DKM08_RS11605;product=glucosyl-3-phosphoglycerate phosphatase;protein_id=WP_010950715.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2355135 2355515 . - . ID=gene-DKM08_RS11610;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=DKM08_RS11610;old_locus_tag=DKM08_11600 NZ_QFYX01000001.1 Protein Homology CDS 2355135 2355515 . - 0 ID=cds-WP_003412394.1;Parent=gene-DKM08_RS11610;Dbxref=GenBank:WP_003412394.1;Name=WP_003412394.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216936.1;locus_tag=DKM08_RS11610;product=ribosome silencing factor;protein_id=WP_003412394.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2355512 2356156 . - . ID=gene-DKM08_RS11615;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=DKM08_RS11615;old_locus_tag=DKM08_11605 NZ_QFYX01000001.1 Protein Homology CDS 2355512 2356156 . - 0 ID=cds-WP_256381315.1;Parent=gene-DKM08_RS11615;Dbxref=GenBank:WP_256381315.1;Name=WP_256381315.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169525.1;locus_tag=DKM08_RS11615;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_256381315.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2356183 2356386 . - . ID=gene-DKM08_RS22540;Name=DKM08_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22540;old_locus_tag=DKM08_11610 NZ_QFYX01000001.1 Protein Homology CDS 2356183 2356386 . - 0 ID=cds-WP_003412401.1;Parent=gene-DKM08_RS22540;Dbxref=GenBank:WP_003412401.1;Name=WP_003412401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412401.1;locus_tag=DKM08_RS22540;product=hypothetical protein;protein_id=WP_003412401.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2356422 2356694 . + . ID=gene-DKM08_RS11625;Name=DKM08_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11625;old_locus_tag=DKM08_11615 NZ_QFYX01000001.1 Protein Homology CDS 2356422 2356694 . + 0 ID=cds-WP_003412405.1;Parent=gene-DKM08_RS11625;Dbxref=GenBank:WP_003412405.1;Name=WP_003412405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216938.1;locus_tag=DKM08_RS11625;product=hypothetical protein;protein_id=WP_003412405.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2356936 2357982 . + . ID=gene-DKM08_RS11630;Name=DKM08_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11630;old_locus_tag=DKM08_11620 NZ_QFYX01000001.1 Protein Homology CDS 2356936 2357982 . + 0 ID=cds-WP_003412408.1;Parent=gene-DKM08_RS11630;Dbxref=GenBank:WP_003412408.1;Name=WP_003412408.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216939.1;locus_tag=DKM08_RS11630;product=class I SAM-dependent methyltransferase;protein_id=WP_003412408.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2358115 2358915 . - . ID=gene-DKM08_RS11635;Name=DKM08_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11635;old_locus_tag=DKM08_11625 NZ_QFYX01000001.1 Protein Homology CDS 2358115 2358915 . - 0 ID=cds-WP_108016176.1;Parent=gene-DKM08_RS11635;Dbxref=GenBank:WP_108016176.1;Name=WP_108016176.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.6;locus_tag=DKM08_RS11635;product=transposase;protein_id=WP_108016176.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2359203 2360645 . - . ID=gene-DKM08_RS11640;Name=DKM08_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11640;old_locus_tag=DKM08_11630 NZ_QFYX01000001.1 Protein Homology CDS 2359203 2360645 . - 0 ID=cds-WP_003412513.1;Parent=gene-DKM08_RS11640;Dbxref=GenBank:WP_003412513.1;Name=WP_003412513.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216941.1;locus_tag=DKM08_RS11640;product=vWA domain-containing protein;protein_id=WP_003412513.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2360645 2361520 . - . ID=gene-DKM08_RS11645;Name=DKM08_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11645;old_locus_tag=DKM08_11635 NZ_QFYX01000001.1 Protein Homology CDS 2360645 2361520 . - 0 ID=cds-WP_010950719.1;Parent=gene-DKM08_RS11645;Dbxref=GenBank:WP_010950719.1;Name=WP_010950719.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216942.1;locus_tag=DKM08_RS11645;product=AAA family ATPase;protein_id=WP_010950719.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2361547 2362794 . - . ID=gene-DKM08_RS11650;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=DKM08_RS11650;old_locus_tag=DKM08_11640 NZ_QFYX01000001.1 Protein Homology CDS 2361547 2362794 . - 0 ID=cds-WP_003412516.1;Parent=gene-DKM08_RS11650;Dbxref=GenBank:WP_003412516.1;Name=WP_003412516.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216943.1;locus_tag=DKM08_RS11650;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_003412516.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2362877 2363262 . - . ID=gene-DKM08_RS22545;Name=DKM08_RS22545;end_range=2363262,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22545;old_locus_tag=DKM08_11645;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2362877 2363262 . - 0 ID=cds-DKM08_RS22545;Parent=gene-DKM08_RS22545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2363262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908684.1;locus_tag=DKM08_RS22545;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2363510 2364097 . + . ID=gene-DKM08_RS11665;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=DKM08_RS11665;old_locus_tag=DKM08_11655 NZ_QFYX01000001.1 Protein Homology CDS 2363510 2364097 . + 0 ID=cds-WP_003412529.1;Parent=gene-DKM08_RS11665;Dbxref=GenBank:WP_003412529.1;Name=WP_003412529.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216944.1;locus_tag=DKM08_RS11665;product=peroxiredoxin AhpC;protein_id=WP_003412529.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2364123 2364656 . + . ID=gene-DKM08_RS11670;Name=ahpD;gbkey=Gene;gene=ahpD;gene_biotype=protein_coding;locus_tag=DKM08_RS11670;old_locus_tag=DKM08_11660 NZ_QFYX01000001.1 Protein Homology CDS 2364123 2364656 . + 0 ID=cds-WP_003412536.1;Parent=gene-DKM08_RS11670;Dbxref=GenBank:WP_003412536.1;Name=WP_003412536.1;gbkey=CDS;gene=ahpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216945.1;locus_tag=DKM08_RS11670;product=alkyl hydroperoxide reductase;protein_id=WP_003412536.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2364653 2365237 . - . ID=gene-DKM08_RS11675;Name=DKM08_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11675;old_locus_tag=DKM08_11665 NZ_QFYX01000001.1 Protein Homology CDS 2364653 2365237 . - 0 ID=cds-WP_003412549.1;Parent=gene-DKM08_RS11675;Dbxref=GenBank:WP_003412549.1;Name=WP_003412549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177881.1;locus_tag=DKM08_RS11675;product=PPE family protein;protein_id=WP_003412549.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2365284 2365583 . - . ID=gene-DKM08_RS11680;Name=DKM08_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11680;old_locus_tag=DKM08_11670 NZ_QFYX01000001.1 Protein Homology CDS 2365284 2365583 . - 0 ID=cds-WP_003412551.1;Parent=gene-DKM08_RS11680;Dbxref=GenBank:WP_003412551.1;Name=WP_003412551.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177882.1;locus_tag=DKM08_RS11680;product=PE family protein;protein_id=WP_003412551.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2365754 2366164 . - . ID=gene-DKM08_RS11685;Name=DKM08_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11685;old_locus_tag=DKM08_11675 NZ_QFYX01000001.1 Protein Homology CDS 2365754 2366164 . - 0 ID=cds-WP_003900520.1;Parent=gene-DKM08_RS11685;Dbxref=GenBank:WP_003900520.1;Name=WP_003900520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216948.1;locus_tag=DKM08_RS11685;product=hypothetical protein;protein_id=WP_003900520.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2366161 2366451 . - . ID=gene-DKM08_RS11690;Name=nrtS;gbkey=Gene;gene=nrtS;gene_biotype=protein_coding;locus_tag=DKM08_RS11690;old_locus_tag=DKM08_11680 NZ_QFYX01000001.1 Protein Homology CDS 2366161 2366451 . - 0 ID=cds-WP_003412553.1;Parent=gene-DKM08_RS11690;Dbxref=GenBank:WP_003412553.1;Name=WP_003412553.1;gbkey=CDS;gene=nrtS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216949.1;locus_tag=DKM08_RS11690;product=nitrate/nitrite transporter NrtS;protein_id=WP_003412553.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2366432 2367877 . - . ID=gene-DKM08_RS11695;Name=DKM08_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11695;old_locus_tag=DKM08_11685 NZ_QFYX01000001.1 Protein Homology CDS 2366432 2367877 . - 0 ID=cds-WP_003900521.1;Parent=gene-DKM08_RS11695;Dbxref=GenBank:WP_003900521.1;Name=WP_003900521.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216950.1;locus_tag=DKM08_RS11695;product=mechanosensitive ion channel domain-containing protein;protein_id=WP_003900521.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2367874 2370066 . - . ID=gene-DKM08_RS11700;Name=DKM08_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11700;old_locus_tag=DKM08_11690 NZ_QFYX01000001.1 Protein Homology CDS 2367874 2370066 . - 0 ID=cds-WP_003412557.1;Parent=gene-DKM08_RS11700;Dbxref=GenBank:WP_003412557.1;Name=WP_003412557.1;Ontology_term=GO:0009190,GO:0035556;gbkey=CDS;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216951.1;locus_tag=DKM08_RS11700;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003412557.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2370547 2371461 . + . ID=gene-DKM08_RS11710;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=DKM08_RS11710;old_locus_tag=DKM08_11700 NZ_QFYX01000001.1 Protein Homology CDS 2370547 2371461 . + 0 ID=cds-WP_010950720.1;Parent=gene-DKM08_RS11710;Dbxref=GenBank:WP_010950720.1;Name=WP_010950720.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216952.1;locus_tag=DKM08_RS11710;product=ribokinase RbsK;protein_id=WP_010950720.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2371693 2372112 . + . ID=gene-DKM08_RS11720;Name=DKM08_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11720;old_locus_tag=DKM08_11710 NZ_QFYX01000001.1 Protein Homology CDS 2371693 2372112 . + 0 ID=cds-WP_003412563.1;Parent=gene-DKM08_RS11720;Dbxref=GenBank:WP_003412563.1;Name=WP_003412563.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216953.1;locus_tag=DKM08_RS11720;product=methyltransferase family protein;protein_id=WP_003412563.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2372109 2374115 . - . ID=gene-DKM08_RS11725;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=DKM08_RS11725;old_locus_tag=DKM08_11715 NZ_QFYX01000001.1 Protein Homology CDS 2372109 2374115 . - 0 ID=cds-WP_055381138.1;Parent=gene-DKM08_RS11725;Dbxref=GenBank:WP_055381138.1;Name=WP_055381138.1;Ontology_term=GO:0008152,GO:0009435,GO:0003952,GO:0004359,GO:0005524;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,ATP binding|0005524||IEA;go_process=metabolic process|0008152||IEA,NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216954.2;locus_tag=DKM08_RS11725;product=NAD(+) synthase;protein_id=WP_055381138.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2374026 2374304 . + . ID=gene-DKM08_RS22175;Name=DKM08_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22175 NZ_QFYX01000001.1 Protein Homology CDS 2374026 2374304 . + 0 ID=cds-WP_010886145.1;Parent=gene-DKM08_RS22175;Dbxref=GenBank:WP_010886145.1;Name=WP_010886145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177671.1;locus_tag=DKM08_RS22175;product=hypothetical protein;protein_id=WP_010886145.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2374434 2375564 . - . ID=gene-DKM08_RS11730;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=DKM08_RS11730;old_locus_tag=DKM08_11720 NZ_QFYX01000001.1 Protein Homology CDS 2374434 2375564 . - 0 ID=cds-WP_003412568.1;Parent=gene-DKM08_RS11730;Dbxref=GenBank:WP_003412568.1;Name=WP_003412568.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216955.1;locus_tag=DKM08_RS11730;product=glutamate 5-kinase;protein_id=WP_003412568.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2375564 2377003 . - . ID=gene-DKM08_RS11735;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=DKM08_RS11735;old_locus_tag=DKM08_11725 NZ_QFYX01000001.1 Protein Homology CDS 2375564 2377003 . - 0 ID=cds-WP_003901405.1;Parent=gene-DKM08_RS11735;Dbxref=GenBank:WP_003901405.1;Name=WP_003901405.1;Ontology_term=GO:0000166,GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216956.1;locus_tag=DKM08_RS11735;product=GTPase ObgE;protein_id=WP_003901405.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2377089 2377349 . - . ID=gene-DKM08_RS11740;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=DKM08_RS11740;old_locus_tag=DKM08_11730 NZ_QFYX01000001.1 Protein Homology CDS 2377089 2377349 . - 0 ID=cds-WP_003412574.1;Parent=gene-DKM08_RS11740;Dbxref=GenBank:WP_003412574.1;Name=WP_003412574.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216957.1;locus_tag=DKM08_RS11740;product=50S ribosomal protein L27;protein_id=WP_003412574.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2377364 2377678 . - . ID=gene-DKM08_RS11745;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=DKM08_RS11745;old_locus_tag=DKM08_11735 NZ_QFYX01000001.1 Protein Homology CDS 2377364 2377678 . - 0 ID=cds-WP_003412578.1;Parent=gene-DKM08_RS11745;Dbxref=GenBank:WP_003412578.1;Name=WP_003412578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216958.1;locus_tag=DKM08_RS11745;product=50S ribosomal protein L21;protein_id=WP_003412578.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2378026 2379501 . + . ID=gene-DKM08_RS11755;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=DKM08_RS11755;old_locus_tag=DKM08_11745 NZ_QFYX01000001.1 Protein Homology CDS 2378026 2379501 . + 0 ID=cds-WP_003412582.1;Parent=gene-DKM08_RS11755;Dbxref=GenBank:WP_003412582.1;Name=WP_003412582.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216959.1;locus_tag=DKM08_RS11755;product=cation:dicarboxylate symporter family transporter;protein_id=WP_003412582.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2379440 2382301 . - . ID=gene-DKM08_RS11760;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=DKM08_RS11760;old_locus_tag=DKM08_11750 NZ_QFYX01000001.1 Protein Homology CDS 2379440 2382301 . - 0 ID=cds-WP_003899322.1;Parent=gene-DKM08_RS11760;Dbxref=GenBank:WP_003899322.1;Name=WP_003899322.1;Ontology_term=GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216960.1;locus_tag=DKM08_RS11760;product=Rne/Rng family ribonuclease;protein_id=WP_003899322.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2382631 2383041 . - . ID=gene-DKM08_RS11765;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=DKM08_RS11765;old_locus_tag=DKM08_11755 NZ_QFYX01000001.1 Protein Homology CDS 2382631 2383041 . - 0 ID=cds-WP_003412592.1;Parent=gene-DKM08_RS11765;Dbxref=GenBank:WP_003412592.1;Name=WP_003412592.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216961.1;locus_tag=DKM08_RS11765;product=nucleoside-diphosphate kinase;protein_id=WP_003412592.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2383084 2383455 . - . ID=gene-DKM08_RS11770;Name=DKM08_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11770;old_locus_tag=DKM08_11760 NZ_QFYX01000001.1 Protein Homology CDS 2383084 2383455 . - 0 ID=cds-WP_003412596.1;Parent=gene-DKM08_RS11770;Dbxref=GenBank:WP_003412596.1;Name=WP_003412596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216962.1;locus_tag=DKM08_RS11770;product=DUF4233 domain-containing protein;protein_id=WP_003412596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2383452 2384915 . - . ID=gene-DKM08_RS11775;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=DKM08_RS11775;old_locus_tag=DKM08_11765 NZ_QFYX01000001.1 Protein Homology CDS 2383452 2384915 . - 0 ID=cds-WP_003899324.1;Parent=gene-DKM08_RS11775;Dbxref=GenBank:WP_003899324.1;Name=WP_003899324.1;Ontology_term=GO:0009396,GO:0046654,GO:0004326,GO:0008841;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,dihydrofolate synthase activity|0008841||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216963.1;locus_tag=DKM08_RS11775;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_003899324.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2384912 2387572 . - . ID=gene-DKM08_RS11780;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=DKM08_RS11780;old_locus_tag=DKM08_11770 NZ_QFYX01000001.1 Protein Homology CDS 2384912 2387572 . - 0 ID=cds-WP_003412604.1;Parent=gene-DKM08_RS11780;Dbxref=GenBank:WP_003412604.1;Name=WP_003412604.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908358.1;locus_tag=DKM08_RS11780;product=valine--tRNA ligase;protein_id=WP_003412604.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2387630 2388889 . - . ID=gene-DKM08_RS11785;Name=DKM08_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11785;old_locus_tag=DKM08_11775 NZ_QFYX01000001.1 Protein Homology CDS 2387630 2388889 . - 0 ID=cds-WP_003412609.1;Parent=gene-DKM08_RS11785;Dbxref=GenBank:WP_003412609.1;Name=WP_003412609.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216965.1;locus_tag=DKM08_RS11785;product=saccharopine dehydrogenase family protein;protein_id=WP_003412609.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2388979 2389497 . - . ID=gene-DKM08_RS11790;Name=rpfE;gbkey=Gene;gene=rpfE;gene_biotype=protein_coding;locus_tag=DKM08_RS11790;old_locus_tag=DKM08_11780 NZ_QFYX01000001.1 Protein Homology CDS 2388979 2389497 . - 0 ID=cds-WP_003412613.1;Parent=gene-DKM08_RS11790;Dbxref=GenBank:WP_003412613.1;Name=WP_003412613.1;gbkey=CDS;gene=rpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216966.1;locus_tag=DKM08_RS11790;product=resuscitation-promoting factor protein RpfE;protein_id=WP_003412613.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2389579 2389977 . + . ID=gene-DKM08_RS11795;Name=DKM08_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11795;old_locus_tag=DKM08_11785 NZ_QFYX01000001.1 Protein Homology CDS 2389579 2389977 . + 0 ID=cds-WP_010950721.1;Parent=gene-DKM08_RS11795;Dbxref=GenBank:WP_010950721.1;Name=WP_010950721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216967.1;locus_tag=DKM08_RS11795;product=hypothetical protein;protein_id=WP_010950721.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2390165 2390311 . - . ID=gene-DKM08_RS11800;Name=DKM08_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11800;old_locus_tag=DKM08_11790 NZ_QFYX01000001.1 Protein Homology CDS 2390165 2390311 . - 0 ID=cds-WP_003908854.1;Parent=gene-DKM08_RS11800;Dbxref=GenBank:WP_003908854.1;Name=WP_003908854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216968.1;locus_tag=DKM08_RS11800;product=hypothetical protein;protein_id=WP_003908854.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2390335 2390940 . - . ID=gene-DKM08_RS11805;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=DKM08_RS11805;old_locus_tag=DKM08_11795 NZ_QFYX01000001.1 Protein Homology CDS 2390335 2390940 . - 0 ID=cds-WP_003412618.1;Parent=gene-DKM08_RS11805;Dbxref=GenBank:WP_003412618.1;Name=WP_003412618.1;Ontology_term=GO:0006777,GO:0061603;gbkey=CDS;gene=mobA;go_function=molybdenum cofactor guanylyltransferase activity|0061603||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216969.1;locus_tag=DKM08_RS11805;product=molybdenum cofactor guanylyltransferase;protein_id=WP_003412618.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2390942 2392063 . - . ID=gene-DKM08_RS11810;Name=DKM08_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11810;old_locus_tag=DKM08_11800 NZ_QFYX01000001.1 Protein Homology CDS 2390942 2392063 . - 0 ID=cds-WP_003412624.1;Parent=gene-DKM08_RS11810;Dbxref=GenBank:WP_003412624.1;Name=WP_003412624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216970.1;locus_tag=DKM08_RS11810;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_003412624.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2392060 2394021 . - . ID=gene-DKM08_RS11815;Name=DKM08_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11815;old_locus_tag=DKM08_11805 NZ_QFYX01000001.1 Protein Homology CDS 2392060 2394021 . - 0 ID=cds-WP_003412627.1;Parent=gene-DKM08_RS11815;Dbxref=GenBank:WP_003412627.1;Name=WP_003412627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216971.1;locus_tag=DKM08_RS11815;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_003412627.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2394253 2395509 . - . ID=gene-DKM08_RS11820;Name=DKM08_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11820;old_locus_tag=DKM08_11810 NZ_QFYX01000001.1 Protein Homology CDS 2394253 2395509 . - 0 ID=cds-WP_003412631.1;Parent=gene-DKM08_RS11820;Dbxref=GenBank:WP_003412631.1;Name=WP_003412631.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216972.1;locus_tag=DKM08_RS11820;product=MFS transporter;protein_id=WP_003412631.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2395525 2396805 . - . ID=gene-DKM08_RS11825;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=DKM08_RS11825;old_locus_tag=DKM08_11815 NZ_QFYX01000001.1 Protein Homology CDS 2395525 2396805 . - 0 ID=cds-WP_003412634.1;Parent=gene-DKM08_RS11825;Dbxref=GenBank:WP_003412634.1;Name=WP_003412634.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216973.1;locus_tag=DKM08_RS11825;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_003412634.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2397096 2398004 . + . ID=gene-DKM08_RS11830;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=DKM08_RS11830;old_locus_tag=DKM08_11820 NZ_QFYX01000001.1 Protein Homology CDS 2397096 2398004 . + 0 ID=cds-WP_003412639.1;Parent=gene-DKM08_RS11830;Dbxref=GenBank:WP_003412639.1;Name=WP_003412639.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216974.1;locus_tag=DKM08_RS11830;product=homocysteine S-methyltransferase;protein_id=WP_003412639.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2398171 2399697 . + . ID=gene-DKM08_RS11835;Name=jefA;gbkey=Gene;gene=jefA;gene_biotype=protein_coding;locus_tag=DKM08_RS11835;old_locus_tag=DKM08_11825 NZ_QFYX01000001.1 Protein Homology CDS 2398171 2399697 . + 0 ID=cds-WP_010950722.1;Parent=gene-DKM08_RS11835;Dbxref=GenBank:WP_010950722.1;Name=WP_010950722.1;gbkey=CDS;gene=jefA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216975.1;locus_tag=DKM08_RS11835;product=multidrug efflux pump JefA;protein_id=WP_010950722.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2399848 2400492 . - . ID=gene-DKM08_RS11840;Name=clpP2;gbkey=Gene;gene=clpP2;gene_biotype=protein_coding;locus_tag=DKM08_RS11840;old_locus_tag=DKM08_11830 NZ_QFYX01000001.1 Protein Homology CDS 2399848 2400492 . - 0 ID=cds-WP_003412648.1;Parent=gene-DKM08_RS11840;Dbxref=GenBank:WP_003412648.1;Name=WP_003412648.1;gbkey=CDS;gene=clpP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216976.1;locus_tag=DKM08_RS11840;product=ATP-dependent CLP protease proteolytic subunit ClpP2;protein_id=WP_003412648.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2400489 2401091 . - . ID=gene-DKM08_RS11845;Name=clpP1;gbkey=Gene;gene=clpP1;gene_biotype=protein_coding;locus_tag=DKM08_RS11845;old_locus_tag=DKM08_11835 NZ_QFYX01000001.1 Protein Homology CDS 2400489 2401091 . - 0 ID=cds-WP_003412650.1;Parent=gene-DKM08_RS11845;Dbxref=GenBank:WP_003412650.1;Name=WP_003412650.1;gbkey=CDS;gene=clpP1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177883.1;locus_tag=DKM08_RS11845;product=ATP-dependent CLP protease proteolytic subunit ClpP1;protein_id=WP_003412650.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2401208 2402608 . - . ID=gene-DKM08_RS11850;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=DKM08_RS11850;old_locus_tag=DKM08_11840 NZ_QFYX01000001.1 Protein Homology CDS 2401208 2402608 . - 0 ID=cds-WP_023349567.1;Parent=gene-DKM08_RS11850;Dbxref=GenBank:WP_023349567.1;Name=WP_023349567.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216978.1;locus_tag=DKM08_RS11850;product=trigger factor;protein_id=WP_023349567.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2402645 2402721 . - . ID=gene-DKM08_RS11855;Name=DKM08_RS11855;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS11855;old_locus_tag=DKM08_11845 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2402645 2402721 . - . ID=rna-DKM08_RS11855;Parent=gene-DKM08_RS11855;anticodon=(pos:complement(2402685..2402687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11855;product=tRNA-Pro NZ_QFYX01000001.1 tRNAscan-SE exon 2402645 2402721 . - . ID=exon-DKM08_RS11855-1;Parent=rna-DKM08_RS11855;anticodon=(pos:complement(2402685..2402687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11855;product=tRNA-Pro NZ_QFYX01000001.1 RefSeq gene 2402858 2402928 . + . ID=gene-DKM08_RS11860;Name=DKM08_RS11860;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS11860;old_locus_tag=DKM08_11850 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2402858 2402928 . + . ID=rna-DKM08_RS11860;Parent=gene-DKM08_RS11860;anticodon=(pos:2402890..2402892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11860;product=tRNA-Gly NZ_QFYX01000001.1 tRNAscan-SE exon 2402858 2402928 . + . ID=exon-DKM08_RS11860-1;Parent=rna-DKM08_RS11860;anticodon=(pos:2402890..2402892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11860;product=tRNA-Gly NZ_QFYX01000001.1 RefSeq gene 2402972 2404156 . + . ID=gene-DKM08_RS11865;Name=lipP;gbkey=Gene;gene=lipP;gene_biotype=protein_coding;locus_tag=DKM08_RS11865;old_locus_tag=DKM08_11855 NZ_QFYX01000001.1 Protein Homology CDS 2402972 2404156 . + 0 ID=cds-WP_003412656.1;Parent=gene-DKM08_RS11865;Dbxref=GenBank:WP_003412656.1;Name=WP_003412656.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipP;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216979.1;locus_tag=DKM08_RS11865;product=serine hydrolase domain-containing protein;protein_id=WP_003412656.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2404176 2404982 . - . ID=gene-DKM08_RS11870;Name=DKM08_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11870;old_locus_tag=DKM08_11860 NZ_QFYX01000001.1 Protein Homology CDS 2404176 2404982 . - 0 ID=cds-WP_003412657.1;Parent=gene-DKM08_RS11870;Dbxref=GenBank:WP_003412657.1;Name=WP_003412657.1;Ontology_term=GO:0006281,GO:0006284,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0140078;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216980.1;locus_tag=DKM08_RS11870;product=Fpg/Nei family DNA glycosylase;protein_id=WP_003412657.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2404988 2405467 . - . ID=gene-DKM08_RS11875;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=DKM08_RS11875;old_locus_tag=DKM08_11865 NZ_QFYX01000001.1 Protein Homology CDS 2404988 2405467 . - 0 ID=cds-WP_003412660.1;Parent=gene-DKM08_RS11875;Dbxref=GenBank:WP_003412660.1;Name=WP_003412660.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=rpiB;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019738062.1;locus_tag=DKM08_RS11875;product=ribose-5-phosphate isomerase;protein_id=WP_003412660.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2405578 2406201 . - . ID=gene-DKM08_RS11880;Name=DKM08_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11880;old_locus_tag=DKM08_11870 NZ_QFYX01000001.1 Protein Homology CDS 2405578 2406201 . - 0 ID=cds-WP_003412664.1;Parent=gene-DKM08_RS11880;Dbxref=GenBank:WP_003412664.1;Name=WP_003412664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216982.1;locus_tag=DKM08_RS11880;product=Rv2466c family mycothiol-dependent reductase;protein_id=WP_003412664.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2406303 2408888 . + . ID=gene-DKM08_RS11885;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=DKM08_RS11885;old_locus_tag=DKM08_11875 NZ_QFYX01000001.1 Protein Homology CDS 2406303 2408888 . + 0 ID=cds-WP_003412666.1;Parent=gene-DKM08_RS11885;Dbxref=GenBank:WP_003412666.1;Name=WP_003412666.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177885.1;locus_tag=DKM08_RS11885;product=aminopeptidase N;protein_id=WP_003412666.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2408961 2409428 . - . ID=gene-DKM08_RS11890;Name=DKM08_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11890;old_locus_tag=DKM08_11880 NZ_QFYX01000001.1 Protein Homology CDS 2408961 2409428 . - 0 ID=cds-WP_003904843.1;Parent=gene-DKM08_RS11890;Dbxref=GenBank:WP_003904843.1;Name=WP_003904843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904843.1;locus_tag=DKM08_RS11890;product=DUF5130 domain-containing protein;protein_id=WP_003904843.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2409415 2409648 . - . ID=gene-DKM08_RS11895;Name=DKM08_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11895;old_locus_tag=DKM08_11885 NZ_QFYX01000001.1 Protein Homology CDS 2409415 2409648 . - 0 ID=cds-WP_003412671.1;Parent=gene-DKM08_RS11895;Dbxref=GenBank:WP_003412671.1;Name=WP_003412671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411168.1;locus_tag=DKM08_RS11895;product=hypothetical protein;protein_id=WP_003412671.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2409684 2410352 . - . ID=gene-DKM08_RS11900;Name=DKM08_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11900;old_locus_tag=DKM08_11890 NZ_QFYX01000001.1 Protein Homology CDS 2409684 2410352 . - 0 ID=cds-WP_003910562.1;Parent=gene-DKM08_RS11900;Dbxref=GenBank:WP_003910562.1;Name=WP_003910562.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216985.1;locus_tag=DKM08_RS11900;product=HNH endonuclease;protein_id=WP_003910562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2410495 2410881 . + . ID=gene-DKM08_RS11905;Name=glbO;gbkey=Gene;gene=glbO;gene_biotype=protein_coding;locus_tag=DKM08_RS11905;old_locus_tag=DKM08_11895 NZ_QFYX01000001.1 Protein Homology CDS 2410495 2410881 . + 0 ID=cds-WP_003412688.1;Parent=gene-DKM08_RS11905;Dbxref=GenBank:WP_003412688.1;Name=WP_003412688.1;gbkey=CDS;gene=glbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216986.1;locus_tag=DKM08_RS11905;product=group 2 truncated hemoglobin GlbO;protein_id=WP_003412688.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2410881 2412521 . + . ID=gene-DKM08_RS11910;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;locus_tag=DKM08_RS11910;old_locus_tag=DKM08_11900 NZ_QFYX01000001.1 Protein Homology CDS 2410881 2412521 . + 0 ID=cds-WP_010950723.1;Parent=gene-DKM08_RS11910;Dbxref=GenBank:WP_010950723.1;Name=WP_010950723.1;gbkey=CDS;gene=aglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216987.1;locus_tag=DKM08_RS11910;product=glycoside hydrolase family 13 protein;protein_id=WP_010950723.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2412589 2412882 . + . ID=gene-DKM08_RS11915;Name=DKM08_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11915;old_locus_tag=DKM08_11905 NZ_QFYX01000001.1 Protein Homology CDS 2412589 2412882 . + 0 ID=cds-WP_003899337.1;Parent=gene-DKM08_RS11915;Dbxref=GenBank:WP_003899337.1;Name=WP_003899337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216988.1;locus_tag=DKM08_RS11915;product=hypothetical protein;protein_id=WP_003899337.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2412885 2413601 . + . ID=gene-DKM08_RS11920;Name=DKM08_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11920;old_locus_tag=DKM08_11910 NZ_QFYX01000001.1 Protein Homology CDS 2412885 2413601 . + 0 ID=cds-WP_003412695.1;Parent=gene-DKM08_RS11920;Dbxref=GenBank:WP_003412695.1;Name=WP_003412695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216989.1;locus_tag=DKM08_RS11920;product=hypothetical protein;protein_id=WP_003412695.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2413633 2414286 . - . ID=gene-DKM08_RS11925;Name=DKM08_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11925;old_locus_tag=DKM08_11915 NZ_QFYX01000001.1 Protein Homology CDS 2413633 2414286 . - 0 ID=cds-WP_010950724.1;Parent=gene-DKM08_RS11925;Dbxref=GenBank:WP_010950724.1;Name=WP_010950724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216990.1;locus_tag=DKM08_RS11925;product=hypothetical protein;protein_id=WP_010950724.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2414292 2414708 . - . ID=gene-DKM08_RS11930;Name=DKM08_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11930;old_locus_tag=DKM08_11920 NZ_QFYX01000001.1 Protein Homology CDS 2414292 2414708 . - 0 ID=cds-WP_003412703.1;Parent=gene-DKM08_RS11930;Dbxref=GenBank:WP_003412703.1;Name=WP_003412703.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216991.1;locus_tag=DKM08_RS11930;product=acyl-CoA thioesterase;protein_id=WP_003412703.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2414705 2419576 . - . ID=gene-DKM08_RS11935;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=DKM08_RS11935;old_locus_tag=DKM08_11925 NZ_QFYX01000001.1 Protein Homology CDS 2414705 2419576 . - 0 ID=cds-WP_003910563.1;Parent=gene-DKM08_RS11935;Dbxref=GenBank:WP_003910563.1;Name=WP_003910563.1;Ontology_term=GO:0004352;gbkey=CDS;gene=gdh;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216992.1;locus_tag=DKM08_RS11935;product=NAD-glutamate dehydrogenase;protein_id=WP_003910563.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2419680 2421356 . - . ID=gene-DKM08_RS11940;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=DKM08_RS11940;old_locus_tag=DKM08_11930 NZ_QFYX01000001.1 Protein Homology CDS 2419680 2421356 . - 0 ID=cds-WP_003412708.1;Parent=gene-DKM08_RS11940;Dbxref=GenBank:WP_003412708.1;Name=WP_003412708.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216993.1;locus_tag=DKM08_RS11940;product=energy-dependent translational throttle protein EttA;protein_id=WP_003412708.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2421437 2421943 . - . ID=gene-DKM08_RS11945;Name=DKM08_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11945;old_locus_tag=DKM08_11935 NZ_QFYX01000001.1 Protein Homology CDS 2421437 2421943 . - 0 ID=cds-WP_003900529.1;Parent=gene-DKM08_RS11945;Dbxref=GenBank:WP_003900529.1;Name=WP_003900529.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900529.1;locus_tag=DKM08_RS11945;product=single-stranded DNA-binding protein;protein_id=WP_003900529.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2422531 2422854 . - . ID=gene-DKM08_RS11955;Name=DKM08_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11955;old_locus_tag=DKM08_11945 NZ_QFYX01000001.1 Protein Homology CDS 2422531 2422854 . - 0 ID=cds-WP_003902275.1;Parent=gene-DKM08_RS11955;Dbxref=GenBank:WP_003902275.1;Name=WP_003902275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216997.1;locus_tag=DKM08_RS11955;product=hypothetical protein;protein_id=WP_003902275.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2422870 2425239 . - . ID=gene-DKM08_RS11960;Name=DKM08_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11960;old_locus_tag=DKM08_11950 NZ_QFYX01000001.1 Protein Homology CDS 2422870 2425239 . - 0 ID=cds-WP_003901413.1;Parent=gene-DKM08_RS11960;Dbxref=GenBank:WP_003901413.1;Name=WP_003901413.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216998.1;locus_tag=DKM08_RS11960;product=glycerol-3-phosphate 1-O-acyltransferase;protein_id=WP_003901413.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2425236 2426978 . - . ID=gene-DKM08_RS11965;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=DKM08_RS11965;old_locus_tag=DKM08_11955 NZ_QFYX01000001.1 Protein Homology CDS 2425236 2426978 . - 0 ID=cds-WP_003412713.1;Parent=gene-DKM08_RS11965;Dbxref=GenBank:WP_003412713.1;Name=WP_003412713.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;gene=plsC;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216999.1;locus_tag=DKM08_RS11965;product=HAD-IB family hydrolase/lysophospholipid acyltransferase family protein;protein_id=WP_003412713.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2426975 2428450 . - . ID=gene-DKM08_RS11970;Name=DKM08_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11970;old_locus_tag=DKM08_11960 NZ_QFYX01000001.1 Protein Homology CDS 2426975 2428450 . - 0 ID=cds-WP_003412717.1;Parent=gene-DKM08_RS11970;Dbxref=GenBank:WP_003412717.1;Name=WP_003412717.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217000.1;locus_tag=DKM08_RS11970;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003412717.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2428679 2429944 . - . ID=gene-DKM08_RS11975;Name=lipQ;gbkey=Gene;gene=lipQ;gene_biotype=protein_coding;locus_tag=DKM08_RS11975;old_locus_tag=DKM08_11965 NZ_QFYX01000001.1 Protein Homology CDS 2428679 2429944 . - 0 ID=cds-WP_003412725.1;Parent=gene-DKM08_RS11975;Dbxref=GenBank:WP_003412725.1;Name=WP_003412725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipQ;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217001.1;locus_tag=DKM08_RS11975;product=alpha/beta hydrolase;protein_id=WP_003412725.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2430132 2430205 . + . ID=gene-DKM08_RS11980;Name=DKM08_RS11980;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS11980;old_locus_tag=DKM08_11970 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2430132 2430205 . + . ID=rna-DKM08_RS11980;Parent=gene-DKM08_RS11980;anticodon=(pos:2430166..2430168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11980;product=tRNA-Arg NZ_QFYX01000001.1 tRNAscan-SE exon 2430132 2430205 . + . ID=exon-DKM08_RS11980-1;Parent=rna-DKM08_RS11980;anticodon=(pos:2430166..2430168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS11980;product=tRNA-Arg NZ_QFYX01000001.1 RefSeq gene 2430306 2431076 . + . ID=gene-DKM08_RS11985;Name=DKM08_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11985;old_locus_tag=DKM08_11975 NZ_QFYX01000001.1 Protein Homology CDS 2430306 2431076 . + 0 ID=cds-WP_003412728.1;Parent=gene-DKM08_RS11985;Dbxref=GenBank:WP_003412728.1;Name=WP_003412728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217002.1;locus_tag=DKM08_RS11985;product=enoyl-CoA hydratase;protein_id=WP_003412728.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2431256 2433339 . - . ID=gene-DKM08_RS11990;Name=DKM08_RS11990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS11990;old_locus_tag=DKM08_11980;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2431256 2433339 . - 0 ID=cds-DKM08_RS11990;Parent=gene-DKM08_RS11990;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177886.1;locus_tag=DKM08_RS11990;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2433421 2436762 . - . ID=gene-DKM08_RS11995;Name=DKM08_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS11995;old_locus_tag=DKM08_11985 NZ_QFYX01000001.1 Protein Homology CDS 2433421 2436762 . - 0 ID=cds-WP_003902279.1;Parent=gene-DKM08_RS11995;Dbxref=GenBank:WP_003902279.1;Name=WP_003902279.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303515.1;locus_tag=DKM08_RS11995;product=LuxR family transcriptional regulator;protein_id=WP_003902279.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2436800 2437099 . - . ID=gene-DKM08_RS12000;Name=DKM08_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12000;old_locus_tag=DKM08_11990 NZ_QFYX01000001.1 Protein Homology CDS 2436800 2437099 . - 0 ID=cds-WP_003899346.1;Parent=gene-DKM08_RS12000;Dbxref=GenBank:WP_003899346.1;Name=WP_003899346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217005.1;locus_tag=DKM08_RS12000;product=hypothetical protein;protein_id=WP_003899346.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2437208 2442189 . - . ID=gene-DKM08_RS12005;Name=DKM08_RS12005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS12005;old_locus_tag=DKM08_11995;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2437208 2442189 . - 0 ID=cds-DKM08_RS12005;Parent=gene-DKM08_RS12005;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177887.1;locus_tag=DKM08_RS12005;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2442276 2442482 . - . ID=gene-DKM08_RS12010;Name=DKM08_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12010;old_locus_tag=DKM08_12000 NZ_QFYX01000001.1 Protein Homology CDS 2442276 2442482 . - 0 ID=cds-WP_003899347.1;Parent=gene-DKM08_RS12010;Dbxref=GenBank:WP_003899347.1;Name=WP_003899347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030040.1;locus_tag=DKM08_RS12010;product=hypothetical protein;protein_id=WP_003899347.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2442618 2443241 . + . ID=gene-DKM08_RS12015;Name=DKM08_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12015;old_locus_tag=DKM08_12005 NZ_QFYX01000001.1 Protein Homology CDS 2442618 2443241 . + 0 ID=cds-WP_003900858.1;Parent=gene-DKM08_RS12015;Dbxref=GenBank:WP_003900858.1;Name=WP_003900858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217007.1;locus_tag=DKM08_RS12015;product=TIGR00725 family protein;protein_id=WP_003900858.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2443231 2443983 . + . ID=gene-DKM08_RS12020;Name=DKM08_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12020;old_locus_tag=DKM08_12010 NZ_QFYX01000001.1 Protein Homology CDS 2443231 2443983 . + 0 ID=cds-WP_003901416.1;Parent=gene-DKM08_RS12020;Dbxref=GenBank:WP_003901416.1;Name=WP_003901416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217008.1;locus_tag=DKM08_RS12020;product=hypothetical protein;protein_id=WP_003901416.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2444036 2444257 . + . ID=gene-DKM08_RS12025;Name=DKM08_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12025;old_locus_tag=DKM08_12015 NZ_QFYX01000001.1 Protein Homology CDS 2444036 2444257 . + 0 ID=cds-WP_003412749.1;Parent=gene-DKM08_RS12025;Dbxref=GenBank:WP_003412749.1;Name=WP_003412749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217009.1;locus_tag=DKM08_RS12025;product=antitoxin;protein_id=WP_003412749.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2444263 2444688 . + . ID=gene-DKM08_RS12030;Name=DKM08_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12030;old_locus_tag=DKM08_12020 NZ_QFYX01000001.1 Protein Homology CDS 2444263 2444688 . + 0 ID=cds-WP_003412752.1;Parent=gene-DKM08_RS12030;Dbxref=GenBank:WP_003412752.1;Name=WP_003412752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217010.1;locus_tag=DKM08_RS12030;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003412752.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2444711 2445892 . - . ID=gene-DKM08_RS12035;Name=bkdC;gbkey=Gene;gene=bkdC;gene_biotype=protein_coding;locus_tag=DKM08_RS12035;old_locus_tag=DKM08_12025 NZ_QFYX01000001.1 Protein Homology CDS 2444711 2445892 . - 0 ID=cds-WP_010950729.1;Parent=gene-DKM08_RS12035;Dbxref=GenBank:WP_010950729.1;Name=WP_010950729.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;gene=bkdC;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217011.1;locus_tag=DKM08_RS12035;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_010950729.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2445889 2446935 . - . ID=gene-DKM08_RS12040;Name=bkdB;gbkey=Gene;gene=bkdB;gene_biotype=protein_coding;locus_tag=DKM08_RS12040;old_locus_tag=DKM08_12030 NZ_QFYX01000001.1 Protein Homology CDS 2445889 2446935 . - 0 ID=cds-WP_010950730.1;Parent=gene-DKM08_RS12040;Dbxref=GenBank:WP_010950730.1;Name=WP_010950730.1;gbkey=CDS;gene=bkdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217012.1;locus_tag=DKM08_RS12040;product=3-methyl-2-oxobutanoate dehydrogenase subunit beta;protein_id=WP_010950730.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2446946 2448049 . - . ID=gene-DKM08_RS12045;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=DKM08_RS12045;old_locus_tag=DKM08_12035 NZ_QFYX01000001.1 Protein Homology CDS 2446946 2448049 . - 0 ID=cds-WP_003412761.1;Parent=gene-DKM08_RS12045;Dbxref=GenBank:WP_003412761.1;Name=WP_003412761.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217013.1;locus_tag=DKM08_RS12045;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_003412761.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2448308 2449129 . - . ID=gene-DKM08_RS12050;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=DKM08_RS12050;old_locus_tag=DKM08_12040 NZ_QFYX01000001.1 Protein Homology CDS 2448308 2449129 . - 0 ID=cds-WP_003412766.1;Parent=gene-DKM08_RS12050;Dbxref=GenBank:WP_003412766.1;Name=WP_003412766.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217014.1;locus_tag=DKM08_RS12050;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_003412766.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2449126 2449683 . - . ID=gene-DKM08_RS12055;Name=DKM08_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12055;old_locus_tag=DKM08_12045 NZ_QFYX01000001.1 Protein Homology CDS 2449126 2449683 . - 0 ID=cds-WP_003412768.1;Parent=gene-DKM08_RS12055;Dbxref=GenBank:WP_003412768.1;Name=WP_003412768.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217015.1;locus_tag=DKM08_RS12055;product=MaoC family dehydratase;protein_id=WP_003412768.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2449680 2450864 . - . ID=gene-DKM08_RS12060;Name=DKM08_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12060;old_locus_tag=DKM08_12050 NZ_QFYX01000001.1 Protein Homology CDS 2449680 2450864 . - 0 ID=cds-WP_003412771.1;Parent=gene-DKM08_RS12060;Dbxref=GenBank:WP_003412771.1;Name=WP_003412771.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217016.1;locus_tag=DKM08_RS12060;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003412771.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2450869 2452833 . - . ID=gene-DKM08_RS12065;Name=DKM08_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12065;old_locus_tag=DKM08_12055 NZ_QFYX01000001.1 Protein Homology CDS 2450869 2452833 . - 0 ID=cds-WP_003899356.1;Parent=gene-DKM08_RS12065;Dbxref=GenBank:WP_003899356.1;Name=WP_003899356.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217017.1;locus_tag=DKM08_RS12065;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003899356.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2452838 2454427 . - . ID=gene-DKM08_RS12070;Name=DKM08_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12070;old_locus_tag=DKM08_12060 NZ_QFYX01000001.1 Protein Homology CDS 2452838 2454427 . - 0 ID=cds-WP_010950731.1;Parent=gene-DKM08_RS12070;Dbxref=GenBank:WP_010950731.1;Name=WP_010950731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217018.1;locus_tag=DKM08_RS12070;product=carboxyl transferase domain-containing protein;protein_id=WP_010950731.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2454424 2455080 . - . ID=gene-DKM08_RS12075;Name=scoB;gbkey=Gene;gene=scoB;gene_biotype=protein_coding;locus_tag=DKM08_RS12075;old_locus_tag=DKM08_12065 NZ_QFYX01000001.1 Protein Homology CDS 2454424 2455080 . - 0 ID=cds-WP_003412782.1;Parent=gene-DKM08_RS12075;Dbxref=GenBank:WP_003412782.1;Name=WP_003412782.1;gbkey=CDS;gene=scoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217019.1;locus_tag=DKM08_RS12075;product=succinyl-CoA--3-ketoacid CoA transferase subunit B;protein_id=WP_003412782.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2455077 2455823 . - . ID=gene-DKM08_RS12080;Name=scoA;gbkey=Gene;gene=scoA;gene_biotype=protein_coding;locus_tag=DKM08_RS12080;old_locus_tag=DKM08_12070 NZ_QFYX01000001.1 Protein Homology CDS 2455077 2455823 . - 0 ID=cds-WP_003412786.1;Parent=gene-DKM08_RS12080;Dbxref=GenBank:WP_003412786.1;Name=WP_003412786.1;gbkey=CDS;gene=scoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217020.1;locus_tag=DKM08_RS12080;product=succinyl-CoA--3-ketoacid CoA transferase subunit A;protein_id=WP_003412786.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2455906 2457549 . - . ID=gene-DKM08_RS12085;Name=DKM08_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12085;old_locus_tag=DKM08_12075 NZ_QFYX01000001.1 Protein Homology CDS 2455906 2457549 . - 0 ID=cds-WP_003899357.1;Parent=gene-DKM08_RS12085;Dbxref=GenBank:WP_003899357.1;Name=WP_003899357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217021.1;locus_tag=DKM08_RS12085;product=AMP-binding protein;protein_id=WP_003899357.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2457665 2458312 . + . ID=gene-DKM08_RS12090;Name=DKM08_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12090;old_locus_tag=DKM08_12080 NZ_QFYX01000001.1 Protein Homology CDS 2457665 2458312 . + 0 ID=cds-WP_003412790.1;Parent=gene-DKM08_RS12090;Dbxref=GenBank:WP_003412790.1;Name=WP_003412790.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217022.1;locus_tag=DKM08_RS12090;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003412790.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2458391 2459212 . + . ID=gene-DKM08_RS12095;Name=DKM08_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12095;old_locus_tag=DKM08_12085 NZ_QFYX01000001.1 Protein Homology CDS 2458391 2459212 . + 0 ID=cds-WP_003412795.1;Parent=gene-DKM08_RS12095;Dbxref=GenBank:WP_003412795.1;Name=WP_003412795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217023.1;locus_tag=DKM08_RS12095;product=MmpS family transport accessory protein;protein_id=WP_003412795.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2459209 2460546 . - . ID=gene-DKM08_RS12100;Name=DKM08_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12100;old_locus_tag=DKM08_12090 NZ_QFYX01000001.1 Protein Homology CDS 2459209 2460546 . - 0 ID=cds-WP_003412798.1;Parent=gene-DKM08_RS12100;Dbxref=GenBank:WP_003412798.1;Name=WP_003412798.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217024.1;locus_tag=DKM08_RS12100;product=MFS transporter;protein_id=WP_003412798.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2460631 2461437 . + . ID=gene-DKM08_RS12105;Name=cmrA;gbkey=Gene;gene=cmrA;gene_biotype=protein_coding;locus_tag=DKM08_RS12105;old_locus_tag=DKM08_12095 NZ_QFYX01000001.1 Protein Homology CDS 2460631 2461437 . + 0 ID=cds-WP_003412799.1;Parent=gene-DKM08_RS12105;Dbxref=GenBank:WP_003412799.1;Name=WP_003412799.1;Note=Catalyzes the final step in mycolic acid biosynthesis.;Ontology_term=GO:0071768;gbkey=CDS;gene=cmrA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217025.1;locus_tag=DKM08_RS12105;product=mycolate reductase;protein_id=WP_003412799.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2461441 2463042 . - . ID=gene-DKM08_RS12110;Name=DKM08_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12110;old_locus_tag=DKM08_12100 NZ_QFYX01000001.1 Protein Homology CDS 2461441 2463042 . - 0 ID=cds-WP_003412803.1;Parent=gene-DKM08_RS12110;Dbxref=GenBank:WP_003412803.1;Name=WP_003412803.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217026.1;locus_tag=DKM08_RS12110;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_003412803.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2463110 2463757 . + . ID=gene-DKM08_RS12115;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=DKM08_RS12115;old_locus_tag=DKM08_12105 NZ_QFYX01000001.1 Protein Homology CDS 2463110 2463757 . + 0 ID=cds-WP_003899361.1;Parent=gene-DKM08_RS12115;Dbxref=GenBank:WP_003899361.1;Name=WP_003899361.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217027.1;locus_tag=DKM08_RS12115;product=oligoribonuclease;protein_id=WP_003899361.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2463807 2463882 . + . ID=gene-DKM08_RS12120;Name=DKM08_RS12120;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS12120;old_locus_tag=DKM08_12110 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2463807 2463882 . + . ID=rna-DKM08_RS12120;Parent=gene-DKM08_RS12120;anticodon=(pos:2463840..2463842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12120;product=tRNA-His NZ_QFYX01000001.1 tRNAscan-SE exon 2463807 2463882 . + . ID=exon-DKM08_RS12120-1;Parent=rna-DKM08_RS12120;anticodon=(pos:2463840..2463842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12120;product=tRNA-His NZ_QFYX01000001.1 RefSeq gene 2464509 2465756 . - . ID=gene-DKM08_RS12130;Name=DKM08_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12130;old_locus_tag=DKM08_12120 NZ_QFYX01000001.1 Protein Homology CDS 2464509 2465756 . - 0 ID=cds-WP_003904572.1-3;Parent=gene-DKM08_RS12130;Dbxref=GenBank:WP_003904572.1;Name=WP_003904572.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=DKM08_RS12130;product=IS256-like element IS1081 family transposase;protein_id=WP_003904572.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2466114 2466536 . + . ID=gene-DKM08_RS12145;Name=DKM08_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12145;old_locus_tag=DKM08_12135 NZ_QFYX01000001.1 Protein Homology CDS 2466114 2466536 . + 0 ID=cds-WP_003412921.1;Parent=gene-DKM08_RS12145;Dbxref=GenBank:WP_003412921.1;Name=WP_003412921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217029.1;locus_tag=DKM08_RS12145;product=hypothetical protein;protein_id=WP_003412921.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2466830 2467291 . - . ID=gene-DKM08_RS12155;Name=DKM08_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12155;old_locus_tag=DKM08_12145 NZ_QFYX01000001.1 Protein Homology CDS 2466830 2467291 . - 0 ID=cds-WP_003899362.1;Parent=gene-DKM08_RS12155;Dbxref=GenBank:WP_003899362.1;Name=WP_003899362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217030.1;locus_tag=DKM08_RS12155;product=DUF4411 family protein;protein_id=WP_003899362.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2467297 2468544 . - . ID=gene-DKM08_RS12160;Name=DKM08_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12160;old_locus_tag=DKM08_12150 NZ_QFYX01000001.1 Protein Homology CDS 2467297 2468544 . - 0 ID=cds-WP_003412926.1;Parent=gene-DKM08_RS12160;Dbxref=GenBank:WP_003412926.1;Name=WP_003412926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217031.1;locus_tag=DKM08_RS12160;product=XRE family transcriptional regulator;protein_id=WP_003412926.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2468663 2469466 . - . ID=gene-DKM08_RS12165;Name=DKM08_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12165;old_locus_tag=DKM08_12155 NZ_QFYX01000001.1 Protein Homology CDS 2468663 2469466 . - 0 ID=cds-WP_003412932.1;Parent=gene-DKM08_RS12165;Dbxref=GenBank:WP_003412932.1;Name=WP_003412932.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217032.2;locus_tag=DKM08_RS12165;product=helix-turn-helix transcriptional regulator;protein_id=WP_003412932.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2469463 2469714 . - . ID=gene-DKM08_RS12170;Name=DKM08_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12170;old_locus_tag=DKM08_12160 NZ_QFYX01000001.1 Protein Homology CDS 2469463 2469714 . - 0 ID=cds-WP_003412936.1;Parent=gene-DKM08_RS12170;Dbxref=GenBank:WP_003412936.1;Name=WP_003412936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217033.1;locus_tag=DKM08_RS12170;product=hypothetical protein;protein_id=WP_003412936.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2470062 2471288 . - . ID=gene-DKM08_RS12180;Name=ldtMt2;gbkey=Gene;gene=ldtMt2;gene_biotype=protein_coding;locus_tag=DKM08_RS12180;old_locus_tag=DKM08_12170 NZ_QFYX01000001.1 Protein Homology CDS 2470062 2471288 . - 0 ID=cds-WP_003412938.1;Parent=gene-DKM08_RS12180;Dbxref=GenBank:WP_003412938.1;Name=WP_003412938.1;gbkey=CDS;gene=ldtMt2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217034.1;locus_tag=DKM08_RS12180;product=L%2CD-transpeptidase LdtMt2;protein_id=WP_003412938.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2471447 2471519 . + . ID=gene-DKM08_RS12185;Name=DKM08_RS12185;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS12185;old_locus_tag=DKM08_12175 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2471447 2471519 . + . ID=rna-DKM08_RS12185;Parent=gene-DKM08_RS12185;anticodon=(pos:2471480..2471482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12185;product=tRNA-Lys NZ_QFYX01000001.1 tRNAscan-SE exon 2471447 2471519 . + . ID=exon-DKM08_RS12185-1;Parent=rna-DKM08_RS12185;anticodon=(pos:2471480..2471482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12185;product=tRNA-Lys NZ_QFYX01000001.1 RefSeq gene 2471738 2473216 . + . ID=gene-DKM08_RS12190;Name=DKM08_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12190;old_locus_tag=DKM08_12180 NZ_QFYX01000001.1 Protein Homology CDS 2471738 2473216 . + 0 ID=cds-WP_003900842.1;Parent=gene-DKM08_RS12190;Dbxref=GenBank:WP_003900842.1;Name=WP_003900842.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177888.1;locus_tag=DKM08_RS12190;product=PecA family PE domain-processing aspartic protease;protein_id=WP_003900842.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2473341 2473568 . - . ID=gene-DKM08_RS12195;Name=DKM08_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12195;old_locus_tag=DKM08_12185 NZ_QFYX01000001.1 Protein Homology CDS 2473341 2473568 . - 0 ID=cds-WP_003412942.1;Parent=gene-DKM08_RS12195;Dbxref=GenBank:WP_003412942.1;Name=WP_003412942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217036.1;locus_tag=DKM08_RS12195;product=DUF3618 domain-containing protein;protein_id=WP_003412942.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2473637 2474110 . + . ID=gene-DKM08_RS12200;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=DKM08_RS12200;old_locus_tag=DKM08_12190 NZ_QFYX01000001.1 Protein Homology CDS 2473637 2474110 . + 0 ID=cds-WP_003412944.1;Parent=gene-DKM08_RS12200;Dbxref=GenBank:WP_003412944.1;Name=WP_003412944.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217037.1;locus_tag=DKM08_RS12200;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_003412944.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2474082 2475494 . - . ID=gene-DKM08_RS12205;Name=DKM08_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12205;old_locus_tag=DKM08_12195 NZ_QFYX01000001.1 Protein Homology CDS 2474082 2475494 . - 0 ID=cds-WP_003412946.1;Parent=gene-DKM08_RS12205;Dbxref=GenBank:WP_003412946.1;Name=WP_003412946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217038.1;locus_tag=DKM08_RS12205;product=dipeptidase;protein_id=WP_003412946.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2475491 2475883 . - . ID=gene-DKM08_RS12210;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=DKM08_RS12210;old_locus_tag=DKM08_12200 NZ_QFYX01000001.1 Protein Homology CDS 2475491 2475883 . - 0 ID=cds-WP_003412952.1;Parent=gene-DKM08_RS12210;Dbxref=GenBank:WP_003412952.1;Name=WP_003412952.1;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217039.1;locus_tag=DKM08_RS12210;product=holo-ACP synthase;protein_id=WP_003412952.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2476076 2485285 . - . ID=gene-DKM08_RS12215;Name=fas;gbkey=Gene;gene=fas;gene_biotype=protein_coding;locus_tag=DKM08_RS12215;old_locus_tag=DKM08_12205 NZ_QFYX01000001.1 Protein Homology CDS 2476076 2485285 . - 0 ID=cds-WP_003901420.1;Parent=gene-DKM08_RS12215;Dbxref=GenBank:WP_003901420.1;Name=WP_003901420.1;gbkey=CDS;gene=fas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217040.1;locus_tag=DKM08_RS12215;product=fatty acid synthase;protein_id=WP_003901420.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2485805 2486527 . - . ID=gene-DKM08_RS12225;Name=DKM08_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12225;old_locus_tag=DKM08_12215 NZ_QFYX01000001.1 Protein Homology CDS 2485805 2486527 . - 0 ID=cds-WP_003412957.1;Parent=gene-DKM08_RS12225;Dbxref=GenBank:WP_003412957.1;Name=WP_003412957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217041.1;locus_tag=DKM08_RS12225;product=DUF1906 domain-containing protein;protein_id=WP_003412957.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2487044 2487271 . + . ID=gene-DKM08_RS12235;Name=DKM08_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12235;old_locus_tag=DKM08_12225 NZ_QFYX01000001.1 Protein Homology CDS 2487044 2487271 . + 0 ID=cds-WP_003412960.1;Parent=gene-DKM08_RS12235;Dbxref=GenBank:WP_003412960.1;Name=WP_003412960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217042.1;locus_tag=DKM08_RS12235;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003412960.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2487268 2487669 . + . ID=gene-DKM08_RS12240;Name=DKM08_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12240;old_locus_tag=DKM08_12230 NZ_QFYX01000001.1 Protein Homology CDS 2487268 2487669 . + 0 ID=cds-WP_003412963.1;Parent=gene-DKM08_RS12240;Dbxref=GenBank:WP_003412963.1;Name=WP_003412963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217043.1;locus_tag=DKM08_RS12240;product=PIN domain-containing protein;protein_id=WP_003412963.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2487704 2488624 . - . ID=gene-DKM08_RS12245;Name=mrr;gbkey=Gene;gene=mrr;gene_biotype=protein_coding;locus_tag=DKM08_RS12245;old_locus_tag=DKM08_12235 NZ_QFYX01000001.1 Protein Homology CDS 2487704 2488624 . - 0 ID=cds-WP_003412965.1;Parent=gene-DKM08_RS12245;Dbxref=GenBank:WP_003412965.1;Name=WP_003412965.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;gene=mrr;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217044.1;locus_tag=DKM08_RS12245;product=restriction endonuclease;protein_id=WP_003412965.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2488965 2489210 . - . ID=gene-DKM08_RS21645;Name=DKM08_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21645 NZ_QFYX01000001.1 Protein Homology CDS 2488965 2489210 . - 0 ID=cds-WP_162146607.1;Parent=gene-DKM08_RS21645;Dbxref=GenBank:WP_162146607.1;Name=WP_162146607.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014588586.1;locus_tag=DKM08_RS21645;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_162146607.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2489269 2490219 . + . ID=gene-DKM08_RS12250;Name=DKM08_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12250;old_locus_tag=DKM08_12240 NZ_QFYX01000001.1 Protein Homology CDS 2489269 2490219 . + 0 ID=cds-WP_003911916.1;Parent=gene-DKM08_RS12250;Dbxref=GenBank:WP_003911916.1;Name=WP_003911916.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830685.1;locus_tag=DKM08_RS12250;product=ERCC4 domain-containing protein;protein_id=WP_003911916.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2490220 2490639 . - . ID=gene-DKM08_RS12255;Name=DKM08_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12255;old_locus_tag=DKM08_12245 NZ_QFYX01000001.1 Protein Homology CDS 2490220 2490639 . - 0 ID=cds-WP_003412970.1;Parent=gene-DKM08_RS12255;Dbxref=GenBank:WP_003412970.1;Name=WP_003412970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217046.1;locus_tag=DKM08_RS12255;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003412970.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2490636 2490860 . - . ID=gene-DKM08_RS12260;Name=DKM08_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12260;old_locus_tag=DKM08_12250 NZ_QFYX01000001.1 Protein Homology CDS 2490636 2490860 . - 0 ID=cds-WP_003412975.1;Parent=gene-DKM08_RS12260;Dbxref=GenBank:WP_003412975.1;Name=WP_003412975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177672.1;locus_tag=DKM08_RS12260;product=antitoxin VapB39;protein_id=WP_003412975.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2490891 2493734 . - . ID=gene-DKM08_RS12265;Name=DKM08_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12265;old_locus_tag=DKM08_12255 NZ_QFYX01000001.1 Protein Homology CDS 2490891 2493734 . - 0 ID=cds-WP_003899363.1;Parent=gene-DKM08_RS12265;Dbxref=GenBank:WP_003899363.1;Name=WP_003899363.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177889.1;locus_tag=DKM08_RS12265;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003899363.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2493806 2494207 . - . ID=gene-DKM08_RS12270;Name=DKM08_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12270;old_locus_tag=DKM08_12260 NZ_QFYX01000001.1 Protein Homology CDS 2493806 2494207 . - 0 ID=cds-WP_003412981.1;Parent=gene-DKM08_RS12270;Dbxref=GenBank:WP_003412981.1;Name=WP_003412981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217048.1;locus_tag=DKM08_RS12270;product=hypothetical protein;protein_id=WP_003412981.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2494207 2494677 . - . ID=gene-DKM08_RS12275;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=DKM08_RS12275;old_locus_tag=DKM08_12265 NZ_QFYX01000001.1 Protein Homology CDS 2494207 2494677 . - 0 ID=cds-WP_003412985.1;Parent=gene-DKM08_RS12275;Dbxref=GenBank:WP_003412985.1;Name=WP_003412985.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217049.1;locus_tag=DKM08_RS12275;product=transcription antitermination factor NusB;protein_id=WP_003412985.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2494680 2495243 . - . ID=gene-DKM08_RS12280;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=DKM08_RS12280;old_locus_tag=DKM08_12270 NZ_QFYX01000001.1 Protein Homology CDS 2494680 2495243 . - 0 ID=cds-WP_003412989.1;Parent=gene-DKM08_RS12280;Dbxref=GenBank:WP_003412989.1;Name=WP_003412989.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559756.1;locus_tag=DKM08_RS12280;product=elongation factor P;protein_id=WP_003412989.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2495253 2496371 . - . ID=gene-DKM08_RS12285;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=DKM08_RS12285;old_locus_tag=DKM08_12275 NZ_QFYX01000001.1 Protein Homology CDS 2495253 2496371 . - 0 ID=cds-WP_003412996.1;Parent=gene-DKM08_RS12285;Dbxref=GenBank:WP_003412996.1;Name=WP_003412996.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepQ;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217051.1;locus_tag=DKM08_RS12285;product=M24 family metallopeptidase;protein_id=WP_003412996.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2496405 2497097 . + . ID=gene-DKM08_RS12290;Name=DKM08_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12290;old_locus_tag=DKM08_12280 NZ_QFYX01000001.1 Protein Homology CDS 2496405 2497097 . + 0 ID=cds-WP_003412998.1;Parent=gene-DKM08_RS12290;Dbxref=GenBank:WP_003412998.1;Name=WP_003412998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217052.1;locus_tag=DKM08_RS12290;product=B-4DMT family transporter;protein_id=WP_003412998.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2497101 2497544 . - . ID=gene-DKM08_RS12295;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=DKM08_RS12295;old_locus_tag=DKM08_12285 NZ_QFYX01000001.1 Protein Homology CDS 2497101 2497544 . - 0 ID=cds-WP_003413001.1;Parent=gene-DKM08_RS12295;Dbxref=GenBank:WP_003413001.1;Name=WP_003413001.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217053.1;locus_tag=DKM08_RS12295;product=type II 3-dehydroquinate dehydratase;protein_id=WP_003413001.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2497541 2498629 . - . ID=gene-DKM08_RS12300;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=DKM08_RS12300;old_locus_tag=DKM08_12290 NZ_QFYX01000001.1 Protein Homology CDS 2497541 2498629 . - 0 ID=cds-WP_003413008.1;Parent=gene-DKM08_RS12300;Dbxref=GenBank:WP_003413008.1;Name=WP_003413008.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217054.1;locus_tag=DKM08_RS12300;product=3-dehydroquinate synthase;protein_id=WP_003413008.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2498626 2499156 . - . ID=gene-DKM08_RS12305;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=DKM08_RS12305;old_locus_tag=DKM08_12295 NZ_QFYX01000001.1 Protein Homology CDS 2498626 2499156 . - 0 ID=cds-WP_003413021.1;Parent=gene-DKM08_RS12305;Dbxref=GenBank:WP_003413021.1;Name=WP_003413021.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217055.1;locus_tag=DKM08_RS12305;product=shikimate kinase AroK;protein_id=WP_003413021.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2499160 2500365 . - . ID=gene-DKM08_RS12310;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=DKM08_RS12310;old_locus_tag=DKM08_12300 NZ_QFYX01000001.1 Protein Homology CDS 2499160 2500365 . - 0 ID=cds-WP_003413027.1;Parent=gene-DKM08_RS12310;Dbxref=GenBank:WP_003413027.1;Name=WP_003413027.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217056.1;locus_tag=DKM08_RS12310;product=chorismate synthase;protein_id=WP_003413027.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2500473 2500787 . + . ID=gene-DKM08_RS12315;Name=DKM08_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12315;old_locus_tag=DKM08_12305 NZ_QFYX01000001.1 Protein Homology CDS 2500473 2500787 . + 0 ID=cds-WP_009937839.1;Parent=gene-DKM08_RS12315;Dbxref=GenBank:WP_009937839.1;Name=WP_009937839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293767.1;locus_tag=DKM08_RS12315;product=hypothetical protein;protein_id=WP_009937839.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2501083 2502294 . + . ID=gene-DKM08_RS12320;Name=DKM08_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12320;old_locus_tag=DKM08_12310 NZ_QFYX01000001.1 Protein Homology CDS 2501083 2502294 . + 0 ID=cds-WP_003900845.1;Parent=gene-DKM08_RS12320;Dbxref=GenBank:WP_003900845.1;Name=WP_003900845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217058.1;locus_tag=DKM08_RS12320;product=alpha/beta hydrolase family protein;protein_id=WP_003900845.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2502421 2503080 . + . ID=gene-DKM08_RS12330;Name=lppA;gbkey=Gene;gene=lppA;gene_biotype=protein_coding;locus_tag=DKM08_RS12330;old_locus_tag=DKM08_12320 NZ_QFYX01000001.1 Protein Homology CDS 2502421 2503080 . + 0 ID=cds-WP_003900846.1;Parent=gene-DKM08_RS12330;Dbxref=GenBank:WP_003900846.1;Name=WP_003900846.1;gbkey=CDS;gene=lppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217059.1;locus_tag=DKM08_RS12330;product=LppA family lipoprotein;protein_id=WP_003900846.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2503077 2503739 . + . ID=gene-DKM08_RS12335;Name=lppB;gbkey=Gene;gene=lppB;gene_biotype=protein_coding;locus_tag=DKM08_RS12335;old_locus_tag=DKM08_12325 NZ_QFYX01000001.1 Protein Homology CDS 2503077 2503739 . + 0 ID=cds-WP_003900848.1;Parent=gene-DKM08_RS12335;Dbxref=GenBank:WP_003900848.1;Name=WP_003900848.1;gbkey=CDS;gene=lppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217060.1;locus_tag=DKM08_RS12335;product=LppA family lipoprotein;protein_id=WP_003900848.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2503736 2504014 . + . ID=gene-DKM08_RS12340;Name=DKM08_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12340;old_locus_tag=DKM08_12330 NZ_QFYX01000001.1 Protein Homology CDS 2503736 2504014 . + 0 ID=cds-WP_003901422.1;Parent=gene-DKM08_RS12340;Dbxref=GenBank:WP_003901422.1;Name=WP_003901422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217061.1;locus_tag=DKM08_RS12340;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003901422.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2504107 2504520 . + . ID=gene-DKM08_RS12345;Name=DKM08_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12345;old_locus_tag=DKM08_12335 NZ_QFYX01000001.1 Protein Homology CDS 2504107 2504520 . + 0 ID=cds-WP_003413164.1;Parent=gene-DKM08_RS12345;Dbxref=GenBank:WP_003413164.1;Name=WP_003413164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217062.1;locus_tag=DKM08_RS12345;product=PIN domain nuclease;protein_id=WP_003413164.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2504559 2504816 . + . ID=gene-DKM08_RS12350;Name=DKM08_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12350;old_locus_tag=DKM08_12340 NZ_QFYX01000001.1 Protein Homology CDS 2504559 2504816 . + 0 ID=cds-WP_003413167.1;Parent=gene-DKM08_RS12350;Dbxref=GenBank:WP_003413167.1;Name=WP_003413167.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217063.1;locus_tag=DKM08_RS12350;product=CopG family transcriptional regulator;protein_id=WP_003413167.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2504813 2505190 . + . ID=gene-DKM08_RS12355;Name=DKM08_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12355;old_locus_tag=DKM08_12345 NZ_QFYX01000001.1 Protein Homology CDS 2504813 2505190 . + 0 ID=cds-WP_003413174.1;Parent=gene-DKM08_RS12355;Dbxref=GenBank:WP_003413174.1;Name=WP_003413174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217064.1;locus_tag=DKM08_RS12355;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413174.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2505206 2505580 . - . ID=gene-DKM08_RS12360;Name=DKM08_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12360;old_locus_tag=DKM08_12350 NZ_QFYX01000001.1 Protein Homology CDS 2505206 2505580 . - 0 ID=cds-WP_003413177.1;Parent=gene-DKM08_RS12360;Dbxref=GenBank:WP_003413177.1;Name=WP_003413177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837057.1;locus_tag=DKM08_RS12360;product=hypothetical protein;protein_id=WP_003413177.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2505680 2506075 . - . ID=gene-DKM08_RS12365;Name=vapC20;gbkey=Gene;gene=vapC20;gene_biotype=protein_coding;locus_tag=DKM08_RS12365;old_locus_tag=DKM08_12355 NZ_QFYX01000001.1 Protein Homology CDS 2505680 2506075 . - 0 ID=cds-WP_003413180.1;Parent=gene-DKM08_RS12365;Dbxref=GenBank:WP_003413180.1;Name=WP_003413180.1;gbkey=CDS;gene=vapC20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217065.1;locus_tag=DKM08_RS12365;product=type II toxin-antitoxin system toxin 23S rRNA-specific endonuclease VapC20;protein_id=WP_003413180.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2506072 2506317 . - . ID=gene-DKM08_RS12370;Name=vapB20;gbkey=Gene;gene=vapB20;gene_biotype=protein_coding;locus_tag=DKM08_RS12370;old_locus_tag=DKM08_12360 NZ_QFYX01000001.1 Protein Homology CDS 2506072 2506317 . - 0 ID=cds-WP_003413183.1;Parent=gene-DKM08_RS12370;Dbxref=GenBank:WP_003413183.1;Name=WP_003413183.1;gbkey=CDS;gene=vapB20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217066.1;locus_tag=DKM08_RS12370;product=type II toxin-antitoxin system antitoxin VapB20;protein_id=WP_003413183.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2506728 2507147 . - . ID=gene-DKM08_RS12380;Name=DKM08_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12380;old_locus_tag=DKM08_12370 NZ_QFYX01000001.1 Protein Homology CDS 2506728 2507147 . - 0 ID=cds-WP_003413190.1;Parent=gene-DKM08_RS12380;Dbxref=GenBank:WP_003413190.1;Name=WP_003413190.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217067.1;locus_tag=DKM08_RS12380;product=A24 family peptidase;protein_id=WP_003413190.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2507159 2507967 . - . ID=gene-DKM08_RS12385;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=pseudogene;locus_tag=DKM08_RS12385;old_locus_tag=DKM08_12375;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2507159 2507967 . - 0 ID=cds-DKM08_RS12385;Parent=gene-DKM08_RS12385;Note=frameshifted;Ontology_term=GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217068.1;locus_tag=DKM08_RS12385;product=shikimate dehydrogenase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2507964 2509217 . - . ID=gene-DKM08_RS12390;Name=DKM08_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12390;old_locus_tag=DKM08_12380 NZ_QFYX01000001.1 Protein Homology CDS 2507964 2509217 . - 0 ID=cds-WP_003413196.1;Parent=gene-DKM08_RS12390;Dbxref=GenBank:WP_003413196.1;Name=WP_003413196.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932,GO:0016829;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA,lyase activity|0016829||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217069.1;locus_tag=DKM08_RS12390;product=endolytic transglycosylase MltG;protein_id=WP_003413196.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2509210 2509722 . - . ID=gene-DKM08_RS12395;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=DKM08_RS12395;old_locus_tag=DKM08_12385 NZ_QFYX01000001.1 Protein Homology CDS 2509210 2509722 . - 0 ID=cds-WP_003413197.1;Parent=gene-DKM08_RS12395;Dbxref=GenBank:WP_003413197.1;Name=WP_003413197.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217070.1;locus_tag=DKM08_RS12395;product=Holliday junction resolvase RuvX;protein_id=WP_003413197.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2509723 2512437 . - . ID=gene-DKM08_RS12400;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=DKM08_RS12400;old_locus_tag=DKM08_12390 NZ_QFYX01000001.1 Protein Homology CDS 2509723 2512437 . - 0 ID=cds-WP_003413201.1;Parent=gene-DKM08_RS12400;Dbxref=GenBank:WP_003413201.1;Name=WP_003413201.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217071.1;locus_tag=DKM08_RS12400;product=alanine--tRNA ligase;protein_id=WP_003413201.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2512528 2512917 . - . ID=gene-DKM08_RS12405;Name=DKM08_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12405;old_locus_tag=DKM08_12395 NZ_QFYX01000001.1 Protein Homology CDS 2512528 2512917 . - 0 ID=cds-WP_003413208.1;Parent=gene-DKM08_RS12405;Dbxref=GenBank:WP_003413208.1;Name=WP_003413208.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217072.1;locus_tag=DKM08_RS12405;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_003413208.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2513078 2513698 . + . ID=gene-DKM08_RS12410;Name=DKM08_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12410;old_locus_tag=DKM08_12400 NZ_QFYX01000001.1 Protein Homology CDS 2513078 2513698 . + 0 ID=cds-WP_003918465.1;Parent=gene-DKM08_RS12410;Dbxref=GenBank:WP_003918465.1;Name=WP_003918465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=DKM08_RS12410;product=antibiotic biosynthesis monooxygenase;protein_id=WP_003918465.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2513870 2514493 . + . ID=gene-DKM08_RS12415;Name=DKM08_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12415;old_locus_tag=DKM08_12405 NZ_QFYX01000001.1 Protein Homology CDS 2513870 2514493 . + 0 ID=cds-WP_003917020.1;Parent=gene-DKM08_RS12415;Dbxref=GenBank:WP_003917020.1;Name=WP_003917020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=DKM08_RS12415;product=hypothetical protein;protein_id=WP_003917020.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2514523 2515881 . - . ID=gene-DKM08_RS12420;Name=DKM08_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12420;old_locus_tag=DKM08_12410 NZ_QFYX01000001.1 Protein Homology CDS 2514523 2515881 . - 0 ID=cds-WP_003413216.1;Parent=gene-DKM08_RS12420;Dbxref=GenBank:WP_003413216.1;Name=WP_003413216.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217075.1;locus_tag=DKM08_RS12420;product=replication-associated recombination protein A;protein_id=WP_003413216.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2516027 2517004 . + . ID=gene-DKM08_RS12425;Name=DKM08_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12425;old_locus_tag=DKM08_12415 NZ_QFYX01000001.1 Protein Homology CDS 2516027 2517004 . + 0 ID=cds-WP_003899377.1;Parent=gene-DKM08_RS12425;Dbxref=GenBank:WP_003899377.1;Name=WP_003899377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217076.1;locus_tag=DKM08_RS12425;product=DUF2189 domain-containing protein;protein_id=WP_003899377.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2517259 2517546 . - . ID=gene-DKM08_RS12435;Name=DKM08_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12435;old_locus_tag=DKM08_12425 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 2517259 2517546 . - 0 ID=cds-WP_234712410.1;Parent=gene-DKM08_RS12435;Dbxref=GenBank:WP_234712410.1;Name=WP_234712410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS12435;product=hypothetical protein;protein_id=WP_234712410.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2517453 2518097 . + . ID=gene-DKM08_RS12440;Name=DKM08_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12440;old_locus_tag=DKM08_12430 NZ_QFYX01000001.1 Protein Homology CDS 2517453 2518097 . + 0 ID=cds-WP_234886454.1;Parent=gene-DKM08_RS12440;Dbxref=GenBank:WP_234886454.1;Name=WP_234886454.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022307.6;locus_tag=DKM08_RS12440;product=DUF2652 domain-containing protein;protein_id=WP_234886454.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2518240 2519289 . + . ID=gene-DKM08_RS12445;Name=DKM08_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12445;old_locus_tag=DKM08_12435 NZ_QFYX01000001.1 Protein Homology CDS 2518240 2519289 . + 0 ID=cds-WP_003413230.1;Parent=gene-DKM08_RS12445;Dbxref=GenBank:WP_003413230.1;Name=WP_003413230.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217079.1;locus_tag=DKM08_RS12445;product=ABC transporter permease;protein_id=WP_003413230.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2519292 2520284 . + . ID=gene-DKM08_RS12450;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=DKM08_RS12450;old_locus_tag=DKM08_12440 NZ_QFYX01000001.1 Protein Homology CDS 2519292 2520284 . + 0 ID=cds-WP_003899378.1;Parent=gene-DKM08_RS12450;Dbxref=GenBank:WP_003899378.1;Name=WP_003899378.1;Ontology_term=GO:0005524;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217080.1;locus_tag=DKM08_RS12450;product=ATP-binding cassette domain-containing protein;protein_id=WP_003899378.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2520561 2522312 . + . ID=gene-DKM08_RS12455;Name=DKM08_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12455;old_locus_tag=DKM08_12445 NZ_QFYX01000001.1 Protein Homology CDS 2520561 2522312 . + 0 ID=cds-WP_003901427.1;Parent=gene-DKM08_RS12455;Dbxref=GenBank:WP_003901427.1;Name=WP_003901427.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217081.1;locus_tag=DKM08_RS12455;product=patatin-like phospholipase family protein;protein_id=WP_003901427.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2522404 2523924 . + . ID=gene-DKM08_RS22760;Name=DKM08_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22760;old_locus_tag=DKM08_12450 NZ_QFYX01000001.1 Protein Homology CDS 2522404 2523924 . + 0 ID=cds-WP_374104941.1;Parent=gene-DKM08_RS22760;Dbxref=GenBank:WP_374104941.1;Name=WP_374104941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021424.6;locus_tag=DKM08_RS22760;product=transglutaminase family protein;protein_id=WP_374104941.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2523950 2525743 . + . ID=gene-DKM08_RS22765;Name=DKM08_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22765;old_locus_tag=DKM08_12455 NZ_QFYX01000001.1 Protein Homology CDS 2523950 2525743 . + 0 ID=cds-WP_010950739.1;Parent=gene-DKM08_RS22765;Dbxref=GenBank:WP_010950739.1;Name=WP_010950739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021424.6;locus_tag=DKM08_RS22765;product=transglutaminase family protein;protein_id=WP_010950739.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2525743 2528397 . + . ID=gene-DKM08_RS12470;Name=DKM08_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12470;old_locus_tag=DKM08_12460 NZ_QFYX01000001.1 Protein Homology CDS 2525743 2528397 . + 0 ID=cds-WP_003413330.1;Parent=gene-DKM08_RS12470;Dbxref=GenBank:WP_003413330.1;Name=WP_003413330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217083.1;locus_tag=DKM08_RS12470;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003413330.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2528394 2529419 . - . ID=gene-DKM08_RS12475;Name=DKM08_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12475;old_locus_tag=DKM08_12465 NZ_QFYX01000001.1 Protein Homology CDS 2528394 2529419 . - 0 ID=cds-WP_003413332.1;Parent=gene-DKM08_RS12475;Dbxref=GenBank:WP_003413332.1;Name=WP_003413332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217084.1;locus_tag=DKM08_RS12475;product=zinc-binding metallopeptidase family protein;protein_id=WP_003413332.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2529412 2530356 . - . ID=gene-DKM08_RS12480;Name=DKM08_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12480;old_locus_tag=DKM08_12470 NZ_QFYX01000001.1 Protein Homology CDS 2529412 2530356 . - 0 ID=cds-WP_003413334.1;Parent=gene-DKM08_RS12480;Dbxref=GenBank:WP_003413334.1;Name=WP_003413334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217085.1;locus_tag=DKM08_RS12480;product=transglutaminase family protein;protein_id=WP_003413334.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2530460 2530849 . + . ID=gene-DKM08_RS12485;Name=DKM08_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12485;old_locus_tag=DKM08_12475 NZ_QFYX01000001.1 Protein Homology CDS 2530460 2530849 . + 0 ID=cds-WP_003413336.1;Parent=gene-DKM08_RS12485;Dbxref=GenBank:WP_003413336.1;Name=WP_003413336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217086.1;locus_tag=DKM08_RS12485;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_003413336.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2530841 2531908 . - . ID=gene-DKM08_RS12490;Name=DKM08_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12490;old_locus_tag=DKM08_12480 NZ_QFYX01000001.1 Protein Homology CDS 2530841 2531908 . - 0 ID=cds-WP_003899381.1;Parent=gene-DKM08_RS12490;Dbxref=GenBank:WP_003899381.1;Name=WP_003899381.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217087.1;locus_tag=DKM08_RS12490;product=FUSC family protein;protein_id=WP_003899381.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2531915 2533750 . - . ID=gene-DKM08_RS12495;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=DKM08_RS12495;old_locus_tag=DKM08_12485 NZ_QFYX01000001.1 Protein Homology CDS 2531915 2533750 . - 0 ID=cds-WP_010950740.1;Parent=gene-DKM08_RS12495;Dbxref=GenBank:WP_010950740.1;Name=WP_010950740.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950740.1;locus_tag=DKM08_RS12495;product=aspartate--tRNA ligase;protein_id=WP_010950740.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2533843 2534730 . + . ID=gene-DKM08_RS12500;Name=DKM08_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12500;old_locus_tag=DKM08_12490 NZ_QFYX01000001.1 Protein Homology CDS 2533843 2534730 . + 0 ID=cds-WP_015385292.1;Parent=gene-DKM08_RS12500;Dbxref=GenBank:WP_015385292.1;Name=WP_015385292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385292.1;locus_tag=DKM08_RS12500;product=oxidoreductase;protein_id=WP_015385292.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2534753 2535256 . + . ID=gene-DKM08_RS12505;Name=DKM08_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12505;old_locus_tag=DKM08_12495 NZ_QFYX01000001.1 Protein Homology CDS 2534753 2535256 . + 0 ID=cds-WP_003413345.1;Parent=gene-DKM08_RS12505;Dbxref=GenBank:WP_003413345.1;Name=WP_003413345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217090.1;locus_tag=DKM08_RS12505;product=SRPBCC family protein;protein_id=WP_003413345.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2535286 2536167 . + . ID=gene-DKM08_RS12510;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=DKM08_RS12510;old_locus_tag=DKM08_12500 NZ_QFYX01000001.1 Protein Homology CDS 2535286 2536167 . + 0 ID=cds-WP_003899384.1;Parent=gene-DKM08_RS12510;Dbxref=GenBank:WP_003899384.1;Name=WP_003899384.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217091.1;locus_tag=DKM08_RS12510;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_003899384.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2536173 2536637 . - . ID=gene-DKM08_RS12515;Name=DKM08_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12515;old_locus_tag=DKM08_12505 NZ_QFYX01000001.1 Protein Homology CDS 2536173 2536637 . - 0 ID=cds-WP_003413352.1;Parent=gene-DKM08_RS12515;Dbxref=GenBank:WP_003413352.1;Name=WP_003413352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217092.1;locus_tag=DKM08_RS12515;product=membrane protein;protein_id=WP_003413352.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2536865 2538454 . + . ID=gene-DKM08_RS12520;Name=DKM08_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12520;old_locus_tag=DKM08_12510 NZ_QFYX01000001.1 Protein Homology CDS 2536865 2538454 . + 0 ID=cds-WP_003413355.1;Parent=gene-DKM08_RS12520;Dbxref=GenBank:WP_003413355.1;Name=WP_003413355.1;Ontology_term=GO:0016311,GO:0003993,GO:0046872;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217093.1;locus_tag=DKM08_RS12520;product=purple acid phosphatase family protein;protein_id=WP_003413355.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2538456 2539478 . - . ID=gene-DKM08_RS12525;Name=DKM08_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12525;old_locus_tag=DKM08_12515 NZ_QFYX01000001.1 Protein Homology CDS 2538456 2539478 . - 0 ID=cds-WP_003413359.1;Parent=gene-DKM08_RS12525;Dbxref=GenBank:WP_003413359.1;Name=WP_003413359.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217094.1;locus_tag=DKM08_RS12525;product=Rv2578c family radical SAM protein;protein_id=WP_003413359.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2539586 2540488 . + . ID=gene-DKM08_RS12530;Name=dhaA;gbkey=Gene;gene=dhaA;gene_biotype=protein_coding;locus_tag=DKM08_RS12530;old_locus_tag=DKM08_12520 NZ_QFYX01000001.1 Protein Homology CDS 2539586 2540488 . + 0 ID=cds-WP_010950743.1;Parent=gene-DKM08_RS12530;Dbxref=GenBank:WP_010950743.1;Name=WP_010950743.1;Ontology_term=GO:0018786;gbkey=CDS;gene=dhaA;go_function=haloalkane dehalogenase activity|0018786||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177890.1;locus_tag=DKM08_RS12530;product=haloalkane dehalogenase;protein_id=WP_010950743.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2540768 2542039 . - . ID=gene-DKM08_RS12535;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=DKM08_RS12535;old_locus_tag=DKM08_12525 NZ_QFYX01000001.1 Protein Homology CDS 2540768 2542039 . - 0 ID=cds-WP_003413365.1;Parent=gene-DKM08_RS12535;Dbxref=GenBank:WP_003413365.1;Name=WP_003413365.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217096.1;locus_tag=DKM08_RS12535;product=histidine--tRNA ligase;protein_id=WP_003413365.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2542036 2542710 . - . ID=gene-DKM08_RS12540;Name=DKM08_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12540;old_locus_tag=DKM08_12530 NZ_QFYX01000001.1 Protein Homology CDS 2542036 2542710 . - 0 ID=cds-WP_003413366.1;Parent=gene-DKM08_RS12540;Dbxref=GenBank:WP_003413366.1;Name=WP_003413366.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217097.1;locus_tag=DKM08_RS12540;product=MBL fold metallo-hydrolase;protein_id=WP_003413366.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2542809 2543687 . + . ID=gene-DKM08_RS12545;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=DKM08_RS12545;old_locus_tag=DKM08_12535 NZ_QFYX01000001.1 Protein Homology CDS 2542809 2543687 . + 0 ID=cds-WP_031657281.1;Parent=gene-DKM08_RS12545;Dbxref=GenBank:WP_031657281.1;Name=WP_031657281.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917032.1;locus_tag=DKM08_RS12545;product=peptidylprolyl isomerase PpiB;protein_id=WP_031657281.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2543773 2546145 . - . ID=gene-DKM08_RS12550;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=DKM08_RS12550;old_locus_tag=DKM08_12540 NZ_QFYX01000001.1 Protein Homology CDS 2543773 2546145 . - 0 ID=cds-WP_003413368.1;Parent=gene-DKM08_RS12550;Dbxref=GenBank:WP_003413368.1;Name=WP_003413368.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;gene=relA;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217099.1;locus_tag=DKM08_RS12550;product=RelA/SpoT family protein;protein_id=WP_003413368.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2546176 2546847 . - . ID=gene-DKM08_RS12555;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=DKM08_RS12555;old_locus_tag=DKM08_12545 NZ_QFYX01000001.1 Protein Homology CDS 2546176 2546847 . - 0 ID=cds-WP_003413369.1;Parent=gene-DKM08_RS12555;Dbxref=GenBank:WP_003413369.1;Name=WP_003413369.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217100.1;locus_tag=DKM08_RS12555;product=adenine phosphoribosyltransferase;protein_id=WP_003413369.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2546951 2548624 . - . ID=gene-DKM08_RS12560;Name=DKM08_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12560;old_locus_tag=DKM08_12550 NZ_QFYX01000001.1 Protein Homology CDS 2546951 2548624 . - 0 ID=cds-WP_003413373.1;Parent=gene-DKM08_RS12560;Dbxref=GenBank:WP_003413373.1;Name=WP_003413373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217101.1;locus_tag=DKM08_RS12560;product=ABC transporter substrate-binding protein;protein_id=WP_003413373.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2548630 2549958 . - . ID=gene-DKM08_RS12565;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=DKM08_RS12565;old_locus_tag=DKM08_12555 NZ_QFYX01000001.1 Protein Homology CDS 2548630 2549958 . - 0 ID=cds-WP_010950745.1;Parent=gene-DKM08_RS12565;Dbxref=GenBank:WP_010950745.1;Name=WP_010950745.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217102.1;locus_tag=DKM08_RS12565;product=protein translocase subunit SecF;protein_id=WP_010950745.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2549962 2551683 . - . ID=gene-DKM08_RS12570;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=DKM08_RS12570;old_locus_tag=DKM08_12560 NZ_QFYX01000001.1 Protein Homology CDS 2549962 2551683 . - 0 ID=cds-WP_003413385.1;Parent=gene-DKM08_RS12570;Dbxref=GenBank:WP_003413385.1;Name=WP_003413385.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217103.1;locus_tag=DKM08_RS12570;product=protein translocase subunit SecD;protein_id=WP_003413385.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2551793 2552140 . - . ID=gene-DKM08_RS12575;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=DKM08_RS12575;old_locus_tag=DKM08_12565 NZ_QFYX01000001.1 Protein Homology CDS 2551793 2552140 . - 0 ID=cds-WP_003413391.1;Parent=gene-DKM08_RS12575;Dbxref=GenBank:WP_003413391.1;Name=WP_003413391.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217104.1;locus_tag=DKM08_RS12575;product=preprotein translocase subunit YajC;protein_id=WP_003413391.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2552307 2553656 . + . ID=gene-DKM08_RS12585;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=DKM08_RS12585;old_locus_tag=DKM08_12575 NZ_QFYX01000001.1 Protein Homology CDS 2552307 2553656 . + 0 ID=cds-WP_003413395.1;Parent=gene-DKM08_RS12585;Dbxref=GenBank:WP_003413395.1;Name=WP_003413395.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217105.1;locus_tag=DKM08_RS12585;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_003413395.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2553818 2557324 . + . ID=gene-DKM08_RS12590;Name=car;gbkey=Gene;gene=car;gene_biotype=protein_coding;locus_tag=DKM08_RS12590;old_locus_tag=DKM08_12580 NZ_QFYX01000001.1 Protein Homology CDS 2553818 2557324 . + 0 ID=cds-WP_011799278.1;Parent=gene-DKM08_RS12590;Dbxref=GenBank:WP_011799278.1;Name=WP_011799278.1;Ontology_term=GO:0006629,GO:0005524,GO:0016620,GO:0031177,GO:0050661;gbkey=CDS;gene=car;go_function=ATP binding|0005524||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,phosphopantetheine binding|0031177||IEA,NADP binding|0050661||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217106.1;locus_tag=DKM08_RS12590;product=carboxylic acid reductase;protein_id=WP_011799278.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2557498 2559138 . + . ID=gene-DKM08_RS12595;Name=DKM08_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12595;old_locus_tag=DKM08_12585 NZ_QFYX01000001.1 Protein Homology CDS 2557498 2559138 . + 0 ID=cds-WP_010950748.1;Parent=gene-DKM08_RS12595;Dbxref=GenBank:WP_010950748.1;Name=WP_010950748.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177891.1;locus_tag=DKM08_RS12595;product=PE family protein;protein_id=WP_010950748.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2559155 2560189 . - . ID=gene-DKM08_RS12600;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=DKM08_RS12600;old_locus_tag=DKM08_12590 NZ_QFYX01000001.1 Protein Homology CDS 2559155 2560189 . - 0 ID=cds-WP_003413416.1;Parent=gene-DKM08_RS12600;Dbxref=GenBank:WP_003413416.1;Name=WP_003413416.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217108.1;locus_tag=DKM08_RS12600;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_003413416.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2560186 2560776 . - . ID=gene-DKM08_RS12605;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=DKM08_RS12605;old_locus_tag=DKM08_12595 NZ_QFYX01000001.1 Protein Homology CDS 2560186 2560776 . - 0 ID=cds-WP_003413421.1;Parent=gene-DKM08_RS12605;Dbxref=GenBank:WP_003413421.1;Name=WP_003413421.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217109.1;locus_tag=DKM08_RS12605;product=Holliday junction branch migration protein RuvA;protein_id=WP_003413421.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2560773 2561339 . - . ID=gene-DKM08_RS12610;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=DKM08_RS12610;old_locus_tag=DKM08_12600 NZ_QFYX01000001.1 Protein Homology CDS 2560773 2561339 . - 0 ID=cds-WP_003413426.1;Parent=gene-DKM08_RS12610;Dbxref=GenBank:WP_003413426.1;Name=WP_003413426.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217110.1;locus_tag=DKM08_RS12610;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_003413426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2561448 2561693 . + . ID=gene-DKM08_RS12615;Name=DKM08_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12615;old_locus_tag=DKM08_12605 NZ_QFYX01000001.1 Protein Homology CDS 2561448 2561693 . + 0 ID=cds-WP_003413429.1;Parent=gene-DKM08_RS12615;Dbxref=GenBank:WP_003413429.1;Name=WP_003413429.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217111.1;locus_tag=DKM08_RS12615;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_003413429.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2561690 2562094 . + . ID=gene-DKM08_RS12620;Name=DKM08_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12620;old_locus_tag=DKM08_12610 NZ_QFYX01000001.1 Protein Homology CDS 2561690 2562094 . + 0 ID=cds-WP_003413432.1;Parent=gene-DKM08_RS12620;Dbxref=GenBank:WP_003413432.1;Name=WP_003413432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217112.1;locus_tag=DKM08_RS12620;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413432.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2562311 2562931 . + . ID=gene-DKM08_RS12625;Name=DKM08_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12625;old_locus_tag=DKM08_12615 NZ_QFYX01000001.1 Protein Homology CDS 2562311 2562931 . + 0 ID=cds-WP_003413441.1;Parent=gene-DKM08_RS12625;Dbxref=GenBank:WP_003413441.1;Name=WP_003413441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217113.1;locus_tag=DKM08_RS12625;product=DUF4178 domain-containing protein;protein_id=WP_003413441.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2562942 2563436 . + . ID=gene-DKM08_RS12630;Name=DKM08_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12630;old_locus_tag=DKM08_12620 NZ_QFYX01000001.1 Protein Homology CDS 2562942 2563436 . + 0 ID=cds-WP_003413444.1;Parent=gene-DKM08_RS12630;Dbxref=GenBank:WP_003413444.1;Name=WP_003413444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217114.1;locus_tag=DKM08_RS12630;product=DUF2617 family protein;protein_id=WP_003413444.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2563433 2563864 . + . ID=gene-DKM08_RS12635;Name=DKM08_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12635;old_locus_tag=DKM08_12625 NZ_QFYX01000001.1 Protein Homology CDS 2563433 2563864 . + 0 ID=cds-WP_003413445.1;Parent=gene-DKM08_RS12635;Dbxref=GenBank:WP_003413445.1;Name=WP_003413445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217115.1;locus_tag=DKM08_RS12635;product=DUF4247 domain-containing protein;protein_id=WP_003413445.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2563889 2564347 . + . ID=gene-DKM08_RS12640;Name=DKM08_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12640;old_locus_tag=DKM08_12630 NZ_QFYX01000001.1 Protein Homology CDS 2563889 2564347 . + 0 ID=cds-WP_003413451.1;Parent=gene-DKM08_RS12640;Dbxref=GenBank:WP_003413451.1;Name=WP_003413451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413451.1;locus_tag=DKM08_RS12640;product=DUF350 domain-containing protein;protein_id=WP_003413451.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2564344 2565915 . + . ID=gene-DKM08_RS12645;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=DKM08_RS12645;old_locus_tag=DKM08_12635 NZ_QFYX01000001.1 Protein Homology CDS 2564344 2565915 . + 0 ID=cds-WP_003899392.1;Parent=gene-DKM08_RS12645;Dbxref=GenBank:WP_003899392.1;Name=WP_003899392.1;Ontology_term=GO:0003824;gbkey=CDS;gene=speE;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177892.1;locus_tag=DKM08_RS12645;product=polyamine aminopropyltransferase;protein_id=WP_003899392.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2566026 2566313 . + . ID=gene-DKM08_RS12650;Name=DKM08_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12650;old_locus_tag=DKM08_12640 NZ_QFYX01000001.1 Protein Homology CDS 2566026 2566313 . + 0 ID=cds-WP_003413456.1;Parent=gene-DKM08_RS12650;Dbxref=GenBank:WP_003413456.1;Name=WP_003413456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177673.1;locus_tag=DKM08_RS12650;product=antitoxin VapB41;protein_id=WP_003413456.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2566300 2566740 . + . ID=gene-DKM08_RS12655;Name=DKM08_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12655;old_locus_tag=DKM08_12645 NZ_QFYX01000001.1 Protein Homology CDS 2566300 2566740 . + 0 ID=cds-WP_003413460.1;Parent=gene-DKM08_RS12655;Dbxref=GenBank:WP_003413460.1;Name=WP_003413460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217118.1;locus_tag=DKM08_RS12655;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413460.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2566761 2567516 . - . ID=gene-DKM08_RS12660;Name=DKM08_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12660;old_locus_tag=DKM08_12650 NZ_QFYX01000001.1 Protein Homology CDS 2566761 2567516 . - 0 ID=cds-WP_003413464.1;Parent=gene-DKM08_RS12660;Dbxref=GenBank:WP_003413464.1;Name=WP_003413464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217119.1;locus_tag=DKM08_RS12660;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_003413464.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2567649 2568245 . - . ID=gene-DKM08_RS12665;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=DKM08_RS12665;old_locus_tag=DKM08_12655 NZ_QFYX01000001.1 Protein Homology CDS 2567649 2568245 . - 0 ID=cds-WP_003413465.1;Parent=gene-DKM08_RS12665;Dbxref=GenBank:WP_003413465.1;Name=WP_003413465.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217120.1;locus_tag=DKM08_RS12665;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_003413465.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2568253 2569098 . - . ID=gene-DKM08_RS12670;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=DKM08_RS12670;old_locus_tag=DKM08_12660 NZ_QFYX01000001.1 Protein Homology CDS 2568253 2569098 . - 0 ID=cds-WP_010950749.1;Parent=gene-DKM08_RS12670;Dbxref=GenBank:WP_010950749.1;Name=WP_010950749.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217121.1;locus_tag=DKM08_RS12670;product=acyl-CoA thioesterase II;protein_id=WP_010950749.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2569127 2570026 . - . ID=gene-DKM08_RS12675;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=DKM08_RS12675;old_locus_tag=DKM08_12665 NZ_QFYX01000001.1 Protein Homology CDS 2569127 2570026 . - 0 ID=cds-WP_003413468.1;Parent=gene-DKM08_RS12675;Dbxref=GenBank:WP_003413468.1;Name=WP_003413468.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217122.1;locus_tag=DKM08_RS12675;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_003413468.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2570154 2570828 . + . ID=gene-DKM08_RS12680;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=DKM08_RS12680;old_locus_tag=DKM08_12670 NZ_QFYX01000001.1 Protein Homology CDS 2570154 2570828 . + 0 ID=cds-WP_003413471.1;Parent=gene-DKM08_RS12680;Dbxref=GenBank:WP_003413471.1;Name=WP_003413471.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217123.1;locus_tag=DKM08_RS12680;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_003413471.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2571002 2572744 . + . ID=gene-DKM08_RS12685;Name=DKM08_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12685;old_locus_tag=DKM08_12675 NZ_QFYX01000001.1 Protein Homology CDS 2571002 2572744 . + 0 ID=cds-WP_003413473.1;Parent=gene-DKM08_RS12685;Dbxref=GenBank:WP_003413473.1;Name=WP_003413473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177893.1;locus_tag=DKM08_RS12685;product=PE-PPE domain-containing protein;protein_id=WP_003413473.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2572766 2573821 . - . ID=gene-DKM08_RS12690;Name=DKM08_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12690;old_locus_tag=DKM08_12680 NZ_QFYX01000001.1 Protein Homology CDS 2572766 2573821 . - 0 ID=cds-WP_003413475.1;Parent=gene-DKM08_RS12690;Dbxref=GenBank:WP_003413475.1;Name=WP_003413475.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217125.1;locus_tag=DKM08_RS12690;product=NUDIX hydrolase;protein_id=WP_003413475.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2573821 2574957 . - . ID=gene-DKM08_RS12695;Name=pimA;gbkey=Gene;gene=pimA;gene_biotype=protein_coding;locus_tag=DKM08_RS12695;old_locus_tag=DKM08_12685 NZ_QFYX01000001.1 Protein Homology CDS 2573821 2574957 . - 0 ID=cds-WP_003413478.1;Parent=gene-DKM08_RS12695;Dbxref=GenBank:WP_003413478.1;Name=WP_003413478.1;gbkey=CDS;gene=pimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217126.1;locus_tag=DKM08_RS12695;product=phosphatidyl-myo-inositol alpha-mannosyltransferase;protein_id=WP_003413478.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2574968 2575918 . - . ID=gene-DKM08_RS12700;Name=DKM08_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12700;old_locus_tag=DKM08_12690 NZ_QFYX01000001.1 Protein Homology CDS 2574968 2575918 . - 0 ID=cds-WP_003900533.1;Parent=gene-DKM08_RS12700;Dbxref=GenBank:WP_003900533.1;Name=WP_003900533.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217127.1;locus_tag=DKM08_RS12700;product=phosphatidylinositol mannoside acyltransferase;protein_id=WP_003900533.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2575915 2576568 . - . ID=gene-DKM08_RS12705;Name=pgsA1;gbkey=Gene;gene=pgsA1;gene_biotype=protein_coding;locus_tag=DKM08_RS12705;old_locus_tag=DKM08_12695 NZ_QFYX01000001.1 Protein Homology CDS 2575915 2576568 . - 0 ID=cds-WP_003413482.1;Parent=gene-DKM08_RS12705;Dbxref=GenBank:WP_003413482.1;Name=WP_003413482.1;gbkey=CDS;gene=pgsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177894.1;locus_tag=DKM08_RS12705;product=phosphatidylinositol phosphate synthase;protein_id=WP_003413482.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2576565 2577152 . - . ID=gene-DKM08_RS12710;Name=DKM08_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12710;old_locus_tag=DKM08_12700 NZ_QFYX01000001.1 Protein Homology CDS 2576565 2577152 . - 0 ID=cds-WP_003413484.1;Parent=gene-DKM08_RS12710;Dbxref=GenBank:WP_003413484.1;Name=WP_003413484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217129.1;locus_tag=DKM08_RS12710;product=ATP adenylyltransferase;protein_id=WP_003413484.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2577145 2579223 . - . ID=gene-DKM08_RS12715;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=DKM08_RS12715;old_locus_tag=DKM08_12705 NZ_QFYX01000001.1 Protein Homology CDS 2577145 2579223 . - 0 ID=cds-WP_003413486.1;Parent=gene-DKM08_RS12715;Dbxref=GenBank:WP_003413486.1;Name=WP_003413486.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217130.1;locus_tag=DKM08_RS12715;product=threonine--tRNA ligase;protein_id=WP_003413486.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2579332 2579559 . + . ID=gene-DKM08_RS12720;Name=DKM08_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12720;old_locus_tag=DKM08_12710 NZ_QFYX01000001.1 Protein Homology CDS 2579332 2579559 . + 0 ID=cds-WP_010950750.1;Parent=gene-DKM08_RS12720;Dbxref=GenBank:WP_010950750.1;Name=WP_010950750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177674.1;locus_tag=DKM08_RS12720;product=hypothetical protein;protein_id=WP_010950750.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2579556 2580950 . - . ID=gene-DKM08_RS12725;Name=DKM08_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12725;old_locus_tag=DKM08_12715 NZ_QFYX01000001.1 Protein Homology CDS 2579556 2580950 . - 0 ID=cds-WP_010950751.1;Parent=gene-DKM08_RS12725;Dbxref=GenBank:WP_010950751.1;Name=WP_010950751.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177895.1;locus_tag=DKM08_RS12725;product=PE family protein;protein_id=WP_010950751.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2581295 2581795 . + . ID=gene-DKM08_RS12730;Name=DKM08_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12730;old_locus_tag=DKM08_12720 NZ_QFYX01000001.1 Protein Homology CDS 2581295 2581795 . + 0 ID=cds-WP_010950752.1;Parent=gene-DKM08_RS12730;Dbxref=GenBank:WP_010950752.1;Name=WP_010950752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217132.1;locus_tag=DKM08_RS12730;product=DUF1990 domain-containing protein;protein_id=WP_010950752.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2581812 2582252 . - . ID=gene-DKM08_RS12735;Name=DKM08_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12735;old_locus_tag=DKM08_12725 NZ_QFYX01000001.1 Protein Homology CDS 2581812 2582252 . - 0 ID=cds-WP_003413574.1;Parent=gene-DKM08_RS12735;Dbxref=GenBank:WP_003413574.1;Name=WP_003413574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217133.1;locus_tag=DKM08_RS12735;product=DoxX family membrane protein;protein_id=WP_003413574.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2582348 2583076 . + . ID=gene-DKM08_RS12740;Name=DKM08_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12740;old_locus_tag=DKM08_12730 NZ_QFYX01000001.1 Protein Homology CDS 2582348 2583076 . + 0 ID=cds-WP_003902320.1;Parent=gene-DKM08_RS12740;Dbxref=GenBank:WP_003902320.1;Name=WP_003902320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902320.1;locus_tag=DKM08_RS12740;product=helix-turn-helix transcriptional regulator;protein_id=WP_003902320.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2583061 2583414 . - . ID=gene-DKM08_RS12745;Name=DKM08_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12745;old_locus_tag=DKM08_12735 NZ_QFYX01000001.1 Protein Homology CDS 2583061 2583414 . - 0 ID=cds-WP_003413583.1;Parent=gene-DKM08_RS12745;Dbxref=GenBank:WP_003413583.1;Name=WP_003413583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217135.1;locus_tag=DKM08_RS12745;product=cupin domain-containing protein;protein_id=WP_003413583.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2583427 2583852 . - . ID=gene-DKM08_RS12750;Name=DKM08_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12750;old_locus_tag=DKM08_12740 NZ_QFYX01000001.1 Protein Homology CDS 2583427 2583852 . - 0 ID=cds-WP_003413586.1;Parent=gene-DKM08_RS12750;Dbxref=GenBank:WP_003413586.1;Name=WP_003413586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217136.1;locus_tag=DKM08_RS12750;product=hypothetical protein;protein_id=WP_003413586.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2583849 2584520 . - . ID=gene-DKM08_RS12755;Name=DKM08_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12755;old_locus_tag=DKM08_12745 NZ_QFYX01000001.1 Protein Homology CDS 2583849 2584520 . - 0 ID=cds-WP_010950753.1;Parent=gene-DKM08_RS12755;Dbxref=GenBank:WP_010950753.1;Name=WP_010950753.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217137.1;locus_tag=DKM08_RS12755;product=helix-turn-helix transcriptional regulator;protein_id=WP_010950753.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2584598 2585419 . + . ID=gene-DKM08_RS12760;Name=DKM08_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12760;old_locus_tag=DKM08_12750 NZ_QFYX01000001.1 Protein Homology CDS 2584598 2585419 . + 0 ID=cds-WP_003413589.1;Parent=gene-DKM08_RS12760;Dbxref=GenBank:WP_003413589.1;Name=WP_003413589.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217138.1;locus_tag=DKM08_RS12760;product=class I SAM-dependent methyltransferase;protein_id=WP_003413589.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2585555 2586448 . + . ID=gene-DKM08_RS12765;Name=DKM08_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12765;old_locus_tag=DKM08_12755 NZ_QFYX01000001.1 Protein Homology CDS 2585555 2586448 . + 0 ID=cds-WP_003413592.1;Parent=gene-DKM08_RS12765;Dbxref=GenBank:WP_003413592.1;Name=WP_003413592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217139.1;locus_tag=DKM08_RS12765;product=universal stress protein TB31.7;protein_id=WP_003413592.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2586451 2587245 . - . ID=gene-DKM08_RS12770;Name=DKM08_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12770;old_locus_tag=DKM08_12760 NZ_QFYX01000001.1 Protein Homology CDS 2586451 2587245 . - 0 ID=cds-WP_003899400.1;Parent=gene-DKM08_RS12770;Dbxref=GenBank:WP_003899400.1;Name=WP_003899400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899400.1;locus_tag=DKM08_RS12770;product=universal stress protein;protein_id=WP_003899400.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2587284 2588465 . - . ID=gene-DKM08_RS12775;Name=DKM08_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12775;old_locus_tag=DKM08_12765 NZ_QFYX01000001.1 Protein Homology CDS 2587284 2588465 . - 0 ID=cds-WP_003899401.1;Parent=gene-DKM08_RS12775;Dbxref=GenBank:WP_003899401.1;Name=WP_003899401.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217141.1;locus_tag=DKM08_RS12775;product=site-2 protease family protein;protein_id=WP_003899401.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2588524 2588955 . - . ID=gene-DKM08_RS12780;Name=hrp1;gbkey=Gene;gene=hrp1;gene_biotype=protein_coding;locus_tag=DKM08_RS12780;old_locus_tag=DKM08_12770 NZ_QFYX01000001.1 Protein Homology CDS 2588524 2588955 . - 0 ID=cds-WP_003413598.1;Parent=gene-DKM08_RS12780;Dbxref=GenBank:WP_003413598.1;Name=WP_003413598.1;gbkey=CDS;gene=hrp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217142.1;locus_tag=DKM08_RS12780;product=hypoxic response protein Hrp1;protein_id=WP_003413598.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2589469 2590710 . - . ID=gene-DKM08_RS12785;Name=DKM08_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12785;old_locus_tag=DKM08_12775 NZ_QFYX01000001.1 Protein Homology CDS 2589469 2590710 . - 0 ID=cds-WP_003899402.1;Parent=gene-DKM08_RS12785;Dbxref=GenBank:WP_003899402.1;Name=WP_003899402.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217143.1;locus_tag=DKM08_RS12785;product=alpha/beta hydrolase family protein;protein_id=WP_003899402.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2591125 2591382 . + . ID=gene-DKM08_RS12790;Name=DKM08_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12790;old_locus_tag=DKM08_12780 NZ_QFYX01000001.1 Protein Homology CDS 2591125 2591382 . + 0 ID=cds-WP_151841263.1;Parent=gene-DKM08_RS12790;Dbxref=GenBank:WP_151841263.1;Name=WP_151841263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303543.1;locus_tag=DKM08_RS12790;product=hypothetical protein;protein_id=WP_151841263.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2591729 2592853 . + . ID=gene-DKM08_RS12795;Name=DKM08_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12795;old_locus_tag=DKM08_12785 NZ_QFYX01000001.1 Protein Homology CDS 2591729 2592853 . + 0 ID=cds-WP_003413610.1;Parent=gene-DKM08_RS12795;Dbxref=GenBank:WP_003413610.1;Name=WP_003413610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217145.1;locus_tag=DKM08_RS12795;product=hypothetical protein;protein_id=WP_003413610.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2592855 2593394 . + . ID=gene-DKM08_RS12800;Name=DKM08_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12800;old_locus_tag=DKM08_12790 NZ_QFYX01000001.1 Protein Homology CDS 2592855 2593394 . + 0 ID=cds-WP_003413614.1;Parent=gene-DKM08_RS12800;Dbxref=GenBank:WP_003413614.1;Name=WP_003413614.1;Ontology_term=GO:0006388,GO:0046872,GO:0072669;gbkey=CDS;go_component=tRNA-splicing ligase complex|0072669||IEA;go_function=metal ion binding|0046872||IEA;go_process=tRNA splicing%2C via endonucleolytic cleavage and ligation|0006388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217146.1;locus_tag=DKM08_RS12800;product=archease;protein_id=WP_003413614.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2593410 2594831 . + . ID=gene-DKM08_RS12805;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=DKM08_RS12805;old_locus_tag=DKM08_12795 NZ_QFYX01000001.1 Protein Homology CDS 2593410 2594831 . + 0 ID=cds-WP_017351416.1;Parent=gene-DKM08_RS12805;Dbxref=GenBank:WP_017351416.1;Name=WP_017351416.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351416.1;locus_tag=DKM08_RS12805;product=RNA-splicing ligase RtcB;protein_id=WP_017351416.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2594870 2595151 . - . ID=gene-DKM08_RS12810;Name=DKM08_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12810;old_locus_tag=DKM08_12800 NZ_QFYX01000001.1 Protein Homology CDS 2594870 2595151 . - 0 ID=cds-WP_003413619.1;Parent=gene-DKM08_RS12810;Dbxref=GenBank:WP_003413619.1;Name=WP_003413619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217148.1;locus_tag=DKM08_RS12810;product=DUF1876 domain-containing protein;protein_id=WP_003413619.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2595296 2595781 . - . ID=gene-DKM08_RS12815;Name=DKM08_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12815;old_locus_tag=DKM08_12805 NZ_QFYX01000001.1 Protein Homology CDS 2595296 2595781 . - 0 ID=cds-WP_003413625.1;Parent=gene-DKM08_RS12815;Dbxref=GenBank:WP_003413625.1;Name=WP_003413625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217149.1;locus_tag=DKM08_RS12815;product=non-heme di-iron catalase;protein_id=WP_003413625.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2595808 2596062 . - . ID=gene-DKM08_RS12820;Name=DKM08_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12820;old_locus_tag=DKM08_12810 NZ_QFYX01000001.1 Protein Homology CDS 2595808 2596062 . - 0 ID=cds-WP_003908019.1;Parent=gene-DKM08_RS12820;Dbxref=GenBank:WP_003908019.1;Name=WP_003908019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908019.1;locus_tag=DKM08_RS12820;product=hypothetical protein;protein_id=WP_003908019.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2596066 2598402 . - . ID=gene-DKM08_RS12825;Name=DKM08_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12825;old_locus_tag=DKM08_12815 NZ_QFYX01000001.1 Protein Homology CDS 2596066 2598402 . - 0 ID=cds-WP_009938544.1;Parent=gene-DKM08_RS12825;Dbxref=GenBank:WP_009938544.1;Name=WP_009938544.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177896.1;locus_tag=DKM08_RS12825;product=PE family protein;protein_id=WP_009938544.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2598431 2598673 . + . ID=gene-DKM08_RS12830;Name=DKM08_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12830;old_locus_tag=DKM08_12820 NZ_QFYX01000001.1 Protein Homology CDS 2598431 2598673 . + 0 ID=cds-WP_003899405.1;Parent=gene-DKM08_RS12830;Dbxref=GenBank:WP_003899405.1;Name=WP_003899405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217151.1;locus_tag=DKM08_RS12830;product=hypothetical protein;protein_id=WP_003899405.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2598674 2599351 . + . ID=gene-DKM08_RS12835;Name=DKM08_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12835;old_locus_tag=DKM08_12825 NZ_QFYX01000001.1 Protein Homology CDS 2598674 2599351 . + 0 ID=cds-WP_003899406.1;Parent=gene-DKM08_RS12835;Dbxref=GenBank:WP_003899406.1;Name=WP_003899406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217152.1;locus_tag=DKM08_RS12835;product=chloramphenicol phosphotransferase CPT family protein;protein_id=WP_003899406.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2599547 2600203 . + . ID=gene-DKM08_RS12840;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=DKM08_RS12840;old_locus_tag=DKM08_12830 NZ_QFYX01000001.1 Protein Homology CDS 2599547 2600203 . + 0 ID=cds-WP_003413654.1;Parent=gene-DKM08_RS12840;Dbxref=GenBank:WP_003413654.1;Name=WP_003413654.1;Ontology_term=GO:0016020;gbkey=CDS;gene=dedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217153.1;locus_tag=DKM08_RS12840;product=DedA family protein;protein_id=WP_003413654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2600366 2600812 . + . ID=gene-DKM08_RS12845;Name=DKM08_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12845;old_locus_tag=DKM08_12835 NZ_QFYX01000001.1 Protein Homology CDS 2600366 2600812 . + 0 ID=cds-WP_003413657.1;Parent=gene-DKM08_RS12845;Dbxref=GenBank:WP_003413657.1;Name=WP_003413657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217154.1;locus_tag=DKM08_RS12845;product=anti-sigma factor antagonist;protein_id=WP_003413657.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2600987 2601319 . - . ID=gene-DKM08_RS12850;Name=DKM08_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12850;old_locus_tag=DKM08_12840 NZ_QFYX01000001.1 Protein Homology CDS 2600987 2601319 . - 0 ID=cds-WP_003413663.1;Parent=gene-DKM08_RS12850;Dbxref=GenBank:WP_003413663.1;Name=WP_003413663.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217155.1;locus_tag=DKM08_RS12850;product=YnfA family protein;protein_id=WP_003413663.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2601439 2601798 . - . ID=gene-DKM08_RS12855;Name=DKM08_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12855;old_locus_tag=DKM08_12845 NZ_QFYX01000001.1 Protein Homology CDS 2601439 2601798 . - 0 ID=cds-WP_003413665.1;Parent=gene-DKM08_RS12855;Dbxref=GenBank:WP_003413665.1;Name=WP_003413665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217156.1;locus_tag=DKM08_RS12855;product=Rv2640c family ArsR-like transcriptional regulator;protein_id=WP_003413665.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2601900 2602358 . + . ID=gene-DKM08_RS12860;Name=cadI;gbkey=Gene;gene=cadI;gene_biotype=protein_coding;locus_tag=DKM08_RS12860;old_locus_tag=DKM08_12850 NZ_QFYX01000001.1 Protein Homology CDS 2601900 2602358 . + 0 ID=cds-WP_003413675.1;Parent=gene-DKM08_RS12860;Dbxref=GenBank:WP_003413675.1;Name=WP_003413675.1;gbkey=CDS;gene=cadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217157.1;locus_tag=DKM08_RS12860;product=cadmium-induced metalloenzyme CadI;protein_id=WP_003413675.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2602494 2602874 . + . ID=gene-DKM08_RS12865;Name=DKM08_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12865;old_locus_tag=DKM08_12855 NZ_QFYX01000001.1 Protein Homology CDS 2602494 2602874 . + 0 ID=cds-WP_003899407.1;Parent=gene-DKM08_RS12865;Dbxref=GenBank:WP_003899407.1;Name=WP_003899407.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217158.1;locus_tag=DKM08_RS12865;product=ArsR/SmtB family transcription factor;protein_id=WP_003899407.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2602871 2604367 . + . ID=gene-DKM08_RS12870;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=DKM08_RS12870;old_locus_tag=DKM08_12860 NZ_QFYX01000001.1 Protein Homology CDS 2602871 2604367 . + 0 ID=cds-WP_010950755.1;Parent=gene-DKM08_RS12870;Dbxref=GenBank:WP_010950755.1;Name=WP_010950755.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217159.1;locus_tag=DKM08_RS12870;product=ACR3 family arsenite efflux transporter;protein_id=WP_010950755.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2604602 2604793 . + . ID=gene-DKM08_RS12875;Name=DKM08_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12875;old_locus_tag=DKM08_12865 NZ_QFYX01000001.1 Protein Homology CDS 2604602 2604793 . + 0 ID=cds-WP_003912823.1;Parent=gene-DKM08_RS12875;Dbxref=GenBank:WP_003912823.1;Name=WP_003912823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912823.1;locus_tag=DKM08_RS12875;product=antitoxin MazE family protein;protein_id=WP_003912823.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2604908 2605039 . + . ID=gene-DKM08_RS22550;Name=DKM08_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22550;old_locus_tag=DKM08_12870 NZ_QFYX01000001.1 Protein Homology CDS 2604908 2605039 . + 0 ID=cds-WP_003413709.1;Parent=gene-DKM08_RS22550;Dbxref=GenBank:WP_003413709.1;Name=WP_003413709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413709.1;locus_tag=DKM08_RS22550;product=hypothetical protein;protein_id=WP_003413709.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2605458 2605529 . - . ID=gene-DKM08_RS12885;Name=DKM08_RS12885;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS12885;old_locus_tag=DKM08_12875 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2605458 2605529 . - . ID=rna-DKM08_RS12885;Parent=gene-DKM08_RS12885;anticodon=(pos:complement(2605495..2605497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12885;product=tRNA-Val NZ_QFYX01000001.1 tRNAscan-SE exon 2605458 2605529 . - . ID=exon-DKM08_RS12885-1;Parent=rna-DKM08_RS12885;anticodon=(pos:complement(2605495..2605497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12885;product=tRNA-Val NZ_QFYX01000001.1 RefSeq gene 2605714 2605786 . + . ID=gene-DKM08_RS12890;Name=DKM08_RS12890;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS12890;old_locus_tag=DKM08_12880 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2605714 2605786 . + . ID=rna-DKM08_RS12890;Parent=gene-DKM08_RS12890;anticodon=(pos:2605747..2605749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12890;product=tRNA-Gly NZ_QFYX01000001.1 tRNAscan-SE exon 2605714 2605786 . + . ID=exon-DKM08_RS12890-1;Parent=rna-DKM08_RS12890;anticodon=(pos:2605747..2605749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12890;product=tRNA-Gly NZ_QFYX01000001.1 RefSeq gene 2605816 2605889 . + . ID=gene-DKM08_RS12895;Name=DKM08_RS12895;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS12895;old_locus_tag=DKM08_12885 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2605816 2605889 . + . ID=rna-DKM08_RS12895;Parent=gene-DKM08_RS12895;anticodon=(pos:2605848..2605850);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12895;product=tRNA-Cys NZ_QFYX01000001.1 tRNAscan-SE exon 2605816 2605889 . + . ID=exon-DKM08_RS12895-1;Parent=rna-DKM08_RS12895;anticodon=(pos:2605848..2605850);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12895;product=tRNA-Cys NZ_QFYX01000001.1 RefSeq gene 2605903 2605977 . + . ID=gene-DKM08_RS12900;Name=DKM08_RS12900;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS12900;old_locus_tag=DKM08_12890 NZ_QFYX01000001.1 tRNAscan-SE tRNA 2605903 2605977 . + . ID=rna-DKM08_RS12900;Parent=gene-DKM08_RS12900;anticodon=(pos:2605935..2605937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12900;product=tRNA-Val NZ_QFYX01000001.1 tRNAscan-SE exon 2605903 2605977 . + . ID=exon-DKM08_RS12900-1;Parent=rna-DKM08_RS12900;anticodon=(pos:2605935..2605937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS12900;product=tRNA-Val NZ_QFYX01000001.1 RefSeq gene 2605948 2606169 . - . ID=gene-DKM08_RS12905;Name=DKM08_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12905;old_locus_tag=DKM08_12895 NZ_QFYX01000001.1 Protein Homology CDS 2605948 2606169 . - 0 ID=cds-WP_010950756.1;Parent=gene-DKM08_RS12905;Dbxref=GenBank:WP_010950756.1;Name=WP_010950756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950756.1;locus_tag=DKM08_RS12905;product=hypothetical protein;protein_id=WP_010950756.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2606166 2606555 . - . ID=gene-DKM08_RS12910;Name=DKM08_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12910;old_locus_tag=DKM08_12900 NZ_QFYX01000001.1 Protein Homology CDS 2606166 2606555 . - 0 ID=cds-WP_003899422.1;Parent=gene-DKM08_RS12910;Dbxref=GenBank:WP_003899422.1;Name=WP_003899422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217177.1;locus_tag=DKM08_RS12910;product=hypothetical protein;protein_id=WP_003899422.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2606461 2606733 . + . ID=gene-DKM08_RS12915;Name=DKM08_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12915;old_locus_tag=DKM08_12905 NZ_QFYX01000001.1 Protein Homology CDS 2606461 2606733 . + 0 ID=cds-WP_003900544.1;Parent=gene-DKM08_RS12915;Dbxref=GenBank:WP_003900544.1;Name=WP_003900544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217178.1;locus_tag=DKM08_RS12915;product=hypothetical protein;protein_id=WP_003900544.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2606832 2607065 . + . ID=gene-DKM08_RS12920;Name=DKM08_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12920;old_locus_tag=DKM08_12910 NZ_QFYX01000001.1 Protein Homology CDS 2606832 2607065 . + 0 ID=cds-WP_003413717.1;Parent=gene-DKM08_RS12920;Dbxref=GenBank:WP_003413717.1;Name=WP_003413717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217179.1;locus_tag=DKM08_RS12920;product=hypothetical protein;protein_id=WP_003413717.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2607076 2607330 . + . ID=gene-DKM08_RS12925;Name=DKM08_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12925;old_locus_tag=DKM08_12915 NZ_QFYX01000001.1 Protein Homology CDS 2607076 2607330 . + 0 ID=cds-WP_003413719.1;Parent=gene-DKM08_RS12925;Dbxref=GenBank:WP_003413719.1;Name=WP_003413719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217180.1;locus_tag=DKM08_RS12925;product=hypothetical protein;protein_id=WP_003413719.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2607678 2607959 . + . ID=gene-DKM08_RS12935;Name=DKM08_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12935;old_locus_tag=DKM08_12925 NZ_QFYX01000001.1 Protein Homology CDS 2607678 2607959 . + 0 ID=cds-WP_003899423.1;Parent=gene-DKM08_RS12935;Dbxref=GenBank:WP_003899423.1;Name=WP_003899423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217181.1;locus_tag=DKM08_RS12935;product=hypothetical protein;protein_id=WP_003899423.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2608050 2608832 . + . ID=gene-DKM08_RS12945;Name=DKM08_RS12945;end_range=2608832,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS12945;old_locus_tag=DKM08_12935;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2608050 2608832 . + 0 ID=cds-DKM08_RS12945;Parent=gene-DKM08_RS12945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2608832,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=DKM08_RS12945;partial=true;product=IS256-like element IS1081 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2608875 2609633 . + . ID=gene-DKM08_RS12950;Name=DKM08_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12950;old_locus_tag=DKM08_12940 NZ_QFYX01000001.1 Protein Homology CDS 2608875 2609633 . + 0 ID=cds-WP_003413845.1;Parent=gene-DKM08_RS12950;Dbxref=GenBank:WP_003413845.1;Name=WP_003413845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177897.1;locus_tag=DKM08_RS12950;product=Clp protease N-terminal domain-containing protein;protein_id=WP_003413845.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2609712 2610233 . + . ID=gene-DKM08_RS12955;Name=DKM08_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12955;old_locus_tag=DKM08_12945 NZ_QFYX01000001.1 Protein Homology CDS 2609712 2610233 . + 0 ID=cds-WP_010950757.1;Parent=gene-DKM08_RS12955;Dbxref=GenBank:WP_010950757.1;Name=WP_010950757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217184.1;locus_tag=DKM08_RS12955;product=hypothetical protein;protein_id=WP_010950757.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2610262 2610732 . + . ID=gene-DKM08_RS12960;Name=DKM08_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12960;old_locus_tag=DKM08_12950 NZ_QFYX01000001.1 Protein Homology CDS 2610262 2610732 . + 0 ID=cds-WP_003413852.1;Parent=gene-DKM08_RS12960;Dbxref=GenBank:WP_003413852.1;Name=WP_003413852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217185.1;locus_tag=DKM08_RS12960;product=N-acetyltransferase;protein_id=WP_003413852.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2610710 2611819 . - . ID=gene-DKM08_RS12965;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=DKM08_RS12965;old_locus_tag=DKM08_12955 NZ_QFYX01000001.1 Protein Homology CDS 2610710 2611819 . - 0 ID=cds-WP_003899426.1;Parent=gene-DKM08_RS12965;Dbxref=GenBank:WP_003899426.1;Name=WP_003899426.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217186.1;locus_tag=DKM08_RS12965;product=cell division protein ZapE;protein_id=WP_003899426.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2611818 2612594 . + . ID=gene-DKM08_RS12970;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=DKM08_RS12970;old_locus_tag=DKM08_12960 NZ_QFYX01000001.1 Protein Homology CDS 2611818 2612594 . + 0 ID=cds-WP_023349580.1;Parent=gene-DKM08_RS12970;Dbxref=GenBank:WP_023349580.1;Name=WP_023349580.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217187.1;locus_tag=DKM08_RS12970;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=WP_023349580.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2612661 2614247 . + . ID=gene-DKM08_RS12975;Name=DKM08_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12975;old_locus_tag=DKM08_12965 NZ_QFYX01000001.1 Protein Homology CDS 2612661 2614247 . + 0 ID=cds-WP_003413857.1;Parent=gene-DKM08_RS12975;Dbxref=GenBank:WP_003413857.1;Name=WP_003413857.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217188.1;locus_tag=DKM08_RS12975;product=alpha/beta hydrolase;protein_id=WP_003413857.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2614270 2615571 . + . ID=gene-DKM08_RS12980;Name=aftC;gbkey=Gene;gene=aftC;gene_biotype=protein_coding;locus_tag=DKM08_RS12980;old_locus_tag=DKM08_12970 NZ_QFYX01000001.1 Protein Homology CDS 2614270 2615571 . + 0 ID=cds-WP_003413860.1;Parent=gene-DKM08_RS12980;Dbxref=GenBank:WP_003413860.1;Name=WP_003413860.1;gbkey=CDS;gene=aftC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217189.1;locus_tag=DKM08_RS12980;product=arabinofuranan 3-O-arabinosyltransferase;protein_id=WP_003413860.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2615740 2616150 . + . ID=gene-DKM08_RS12990;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=DKM08_RS12990;old_locus_tag=DKM08_12975 NZ_QFYX01000001.1 Protein Homology CDS 2615740 2616150 . + 0 ID=cds-WP_003413865.1;Parent=gene-DKM08_RS12990;Dbxref=GenBank:WP_003413865.1;Name=WP_003413865.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217190.1;locus_tag=DKM08_RS12990;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_003413865.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2616218 2616970 . - . ID=gene-DKM08_RS12995;Name=DKM08_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS12995;old_locus_tag=DKM08_12980 NZ_QFYX01000001.1 Protein Homology CDS 2616218 2616970 . - 0 ID=cds-WP_003413866.1;Parent=gene-DKM08_RS12995;Dbxref=GenBank:WP_003413866.1;Name=WP_003413866.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217191.1;locus_tag=DKM08_RS12995;product=class I SAM-dependent methyltransferase;protein_id=WP_003413866.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2616967 2617662 . - . ID=gene-DKM08_RS13000;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=DKM08_RS13000;old_locus_tag=DKM08_12985 NZ_QFYX01000001.1 Protein Homology CDS 2616967 2617662 . - 0 ID=cds-WP_003413869.1;Parent=gene-DKM08_RS13000;Dbxref=GenBank:WP_003413869.1;Name=WP_003413869.1;gbkey=CDS;gene=hemQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217192.1;locus_tag=DKM08_RS13000;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_003413869.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2617668 2619026 . - . ID=gene-DKM08_RS13005;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=DKM08_RS13005;old_locus_tag=DKM08_12990 NZ_QFYX01000001.1 Protein Homology CDS 2617668 2619026 . - 0 ID=cds-WP_003413871.1;Parent=gene-DKM08_RS13005;Dbxref=GenBank:WP_003413871.1;Name=WP_003413871.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177675.1;locus_tag=DKM08_RS13005;product=protoporphyrinogen oxidase;protein_id=WP_003413871.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2619023 2620096 . - . ID=gene-DKM08_RS13010;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=DKM08_RS13010;old_locus_tag=DKM08_12995 NZ_QFYX01000001.1 Protein Homology CDS 2619023 2620096 . - 0 ID=cds-WP_003413873.1;Parent=gene-DKM08_RS13010;Dbxref=GenBank:WP_003413873.1;Name=WP_003413873.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217194.1;locus_tag=DKM08_RS13010;product=uroporphyrinogen decarboxylase;protein_id=WP_003413873.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2620149 2620979 . + . ID=gene-DKM08_RS13015;Name=DKM08_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13015;old_locus_tag=DKM08_13000 NZ_QFYX01000001.1 Protein Homology CDS 2620149 2620979 . + 0 ID=cds-WP_003413876.1;Parent=gene-DKM08_RS13015;Dbxref=GenBank:WP_003413876.1;Name=WP_003413876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217195.1;locus_tag=DKM08_RS13015;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003413876.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2621139 2621771 . + . ID=gene-DKM08_RS13020;Name=DKM08_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13020;old_locus_tag=DKM08_13005 NZ_QFYX01000001.1 Protein Homology CDS 2621139 2621771 . + 0 ID=cds-WP_003413879.1;Parent=gene-DKM08_RS13020;Dbxref=GenBank:WP_003413879.1;Name=WP_003413879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217196.1;locus_tag=DKM08_RS13020;product=DUF3000 domain-containing protein;protein_id=WP_003413879.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2621773 2623089 . + . ID=gene-DKM08_RS13025;Name=DKM08_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13025;old_locus_tag=DKM08_13010 NZ_QFYX01000001.1 Protein Homology CDS 2621773 2623089 . + 0 ID=cds-WP_010950759.1;Parent=gene-DKM08_RS13025;Dbxref=GenBank:WP_010950759.1;Name=WP_010950759.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217197.1;locus_tag=DKM08_RS13025;product=ribonuclease D;protein_id=WP_010950759.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2623086 2625002 . - . ID=gene-DKM08_RS13030;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=DKM08_RS13030;old_locus_tag=DKM08_13015 NZ_QFYX01000001.1 Protein Homology CDS 2623086 2625002 . - 0 ID=cds-WP_003413891.1;Parent=gene-DKM08_RS13030;Dbxref=GenBank:WP_003413891.1;Name=WP_003413891.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177898.1;locus_tag=DKM08_RS13030;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_003413891.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2625200 2625643 . + . ID=gene-DKM08_RS13040;Name=DKM08_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13040;old_locus_tag=DKM08_13025 NZ_QFYX01000001.1 Protein Homology CDS 2625200 2625643 . + 0 ID=cds-WP_031652363.1;Parent=gene-DKM08_RS13040;Dbxref=GenBank:WP_031652363.1;Name=WP_031652363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258518.1;locus_tag=DKM08_RS13040;product=CBS domain-containing protein;protein_id=WP_031652363.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2625648 2626937 . + . ID=gene-DKM08_RS13045;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=DKM08_RS13045;old_locus_tag=DKM08_13030 NZ_QFYX01000001.1 Protein Homology CDS 2625648 2626937 . + 0 ID=cds-WP_003413894.1;Parent=gene-DKM08_RS13045;Dbxref=GenBank:WP_003413894.1;Name=WP_003413894.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217200.1;locus_tag=DKM08_RS13045;product=ArsB/NhaD family transporter;protein_id=WP_003413894.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2627017 2628303 . + . ID=gene-DKM08_RS13050;Name=DKM08_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13050;old_locus_tag=DKM08_13035 NZ_QFYX01000001.1 Protein Homology CDS 2627017 2628303 . + 0 ID=cds-WP_003901451.1;Parent=gene-DKM08_RS13050;Dbxref=GenBank:WP_003901451.1;Name=WP_003901451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177899.1;locus_tag=DKM08_RS13050;product=ArsB/NhaD family transporter;protein_id=WP_003901451.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2628314 2629072 . - . ID=gene-DKM08_RS13055;Name=DKM08_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13055;old_locus_tag=DKM08_13040 NZ_QFYX01000001.1 Protein Homology CDS 2628314 2629072 . - 0 ID=cds-WP_003413897.1;Parent=gene-DKM08_RS13055;Dbxref=GenBank:WP_003413897.1;Name=WP_003413897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217202.1;locus_tag=DKM08_RS13055;product=fluoroquinolones efflux ABC transporter permease;protein_id=WP_003413897.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2629069 2629782 . - . ID=gene-DKM08_RS13060;Name=DKM08_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13060;old_locus_tag=DKM08_13045 NZ_QFYX01000001.1 Protein Homology CDS 2629069 2629782 . - 0 ID=cds-WP_003413912.1;Parent=gene-DKM08_RS13060;Dbxref=GenBank:WP_003413912.1;Name=WP_003413912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217203.1;locus_tag=DKM08_RS13060;product=multidrug ABC transporter permease;protein_id=WP_003413912.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2629779 2630684 . - . ID=gene-DKM08_RS13065;Name=DKM08_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13065;old_locus_tag=DKM08_13050 NZ_QFYX01000001.1 Protein Homology CDS 2629779 2630684 . - 0 ID=cds-WP_003413913.1;Parent=gene-DKM08_RS13065;Dbxref=GenBank:WP_003413913.1;Name=WP_003413913.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217204.1;locus_tag=DKM08_RS13065;product=ABC transporter ATP-binding protein;protein_id=WP_003413913.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2630879 2632096 . - . ID=gene-DKM08_RS13070;Name=DKM08_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13070;old_locus_tag=DKM08_13055 NZ_QFYX01000001.1 Protein Homology CDS 2630879 2632096 . - 0 ID=cds-WP_003900550.1;Parent=gene-DKM08_RS13070;Dbxref=GenBank:WP_003900550.1;Name=WP_003900550.1;Ontology_term=GO:0001510,GO:0008757,GO:0046872,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,metal ion binding|0046872||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217205.1;locus_tag=DKM08_RS13070;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_003900550.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2632252 2634243 . - . ID=gene-DKM08_RS13080;Name=DKM08_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13080;old_locus_tag=DKM08_13065 NZ_QFYX01000001.1 Protein Homology CDS 2632252 2634243 . - 0 ID=cds-WP_003413917.1;Parent=gene-DKM08_RS13080;Dbxref=GenBank:WP_003413917.1;Name=WP_003413917.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019699013.1;locus_tag=DKM08_RS13080;product=APC family permease;protein_id=WP_003413917.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2634378 2635061 . + . ID=gene-DKM08_RS13085;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=DKM08_RS13085;old_locus_tag=DKM08_13070 NZ_QFYX01000001.1 Protein Homology CDS 2634378 2635061 . + 0 ID=cds-WP_003413919.1;Parent=gene-DKM08_RS13085;Dbxref=GenBank:WP_003413919.1;Name=WP_003413919.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177900.1;locus_tag=DKM08_RS13085;product=potassium channel family protein;protein_id=WP_003413919.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2635058 2635720 . + . ID=gene-DKM08_RS13090;Name=ceoC;gbkey=Gene;gene=ceoC;gene_biotype=protein_coding;locus_tag=DKM08_RS13090;old_locus_tag=DKM08_13075 NZ_QFYX01000001.1 Protein Homology CDS 2635058 2635720 . + 0 ID=cds-WP_003413921.1;Parent=gene-DKM08_RS13090;Dbxref=GenBank:WP_003413921.1;Name=WP_003413921.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177901.1;locus_tag=DKM08_RS13090;product=potassium channel family protein;protein_id=WP_003413921.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2635731 2636402 . - . ID=gene-DKM08_RS13095;Name=DKM08_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13095;old_locus_tag=DKM08_13080 NZ_QFYX01000001.1 Protein Homology CDS 2635731 2636402 . - 0 ID=cds-WP_003413925.1;Parent=gene-DKM08_RS13095;Dbxref=GenBank:WP_003413925.1;Name=WP_003413925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217209.1;locus_tag=DKM08_RS13095;product=DUF3159 domain-containing protein;protein_id=WP_003413925.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2636433 2636801 . - . ID=gene-DKM08_RS13100;Name=DKM08_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13100;old_locus_tag=DKM08_13085 NZ_QFYX01000001.1 Protein Homology CDS 2636433 2636801 . - 0 ID=cds-WP_003413926.1;Parent=gene-DKM08_RS13100;Dbxref=GenBank:WP_003413926.1;Name=WP_003413926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217210.1;locus_tag=DKM08_RS13100;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_003413926.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2636950 2637657 . + . ID=gene-DKM08_RS13105;Name=DKM08_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13105;old_locus_tag=DKM08_13090 NZ_QFYX01000001.1 Protein Homology CDS 2636950 2637657 . + 0 ID=cds-WP_003413927.1;Parent=gene-DKM08_RS13105;Dbxref=GenBank:WP_003413927.1;Name=WP_003413927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217211.1;locus_tag=DKM08_RS13105;product=alpha/beta fold hydrolase;protein_id=WP_003413927.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2637863 2638642 . - . ID=gene-DKM08_RS13110;Name=DKM08_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13110;old_locus_tag=DKM08_13095 NZ_QFYX01000001.1 Protein Homology CDS 2637863 2638642 . - 0 ID=cds-WP_010950761.1;Parent=gene-DKM08_RS13110;Dbxref=GenBank:WP_010950761.1;Name=WP_010950761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217212.1;locus_tag=DKM08_RS13110;product=DUF3710 domain-containing protein;protein_id=WP_010950761.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2638717 2639181 . - . ID=gene-DKM08_RS13115;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=DKM08_RS13115;old_locus_tag=DKM08_13100 NZ_QFYX01000001.1 Protein Homology CDS 2638717 2639181 . - 0 ID=cds-WP_003413930.1;Parent=gene-DKM08_RS13115;Dbxref=GenBank:WP_003413930.1;Name=WP_003413930.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908085.1;locus_tag=DKM08_RS13115;product=dUTP diphosphatase;protein_id=WP_003413930.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2639207 2639692 . + . ID=gene-DKM08_RS13120;Name=DKM08_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13120;old_locus_tag=DKM08_13105 NZ_QFYX01000001.1 Protein Homology CDS 2639207 2639692 . + 0 ID=cds-WP_003413931.1;Parent=gene-DKM08_RS13120;Dbxref=GenBank:WP_003413931.1;Name=WP_003413931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217214.1;locus_tag=DKM08_RS13120;product=DUF3093 domain-containing protein;protein_id=WP_003413931.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2639697 2639999 . - . ID=gene-DKM08_RS13125;Name=DKM08_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13125;old_locus_tag=DKM08_13110 NZ_QFYX01000001.1 Protein Homology CDS 2639697 2639999 . - 0 ID=cds-WP_003899437.1;Parent=gene-DKM08_RS13125;Dbxref=GenBank:WP_003899437.1;Name=WP_003899437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217215.1;locus_tag=DKM08_RS13125;product=DUF4193 domain-containing protein;protein_id=WP_003899437.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2640237 2640887 . + . ID=gene-DKM08_RS13130;Name=cei;gbkey=Gene;gene=cei;gene_biotype=protein_coding;locus_tag=DKM08_RS13130;old_locus_tag=DKM08_13115 NZ_QFYX01000001.1 Protein Homology CDS 2640237 2640887 . + 0 ID=cds-WP_003413937.1;Parent=gene-DKM08_RS13130;Dbxref=GenBank:WP_003413937.1;Name=WP_003413937.1;gbkey=CDS;gene=cei;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217216.1;locus_tag=DKM08_RS13130;product=envelope integrity protein Cei;protein_id=WP_003413937.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2640897 2641769 . - . ID=gene-DKM08_RS13135;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=DKM08_RS13135;old_locus_tag=DKM08_13120 NZ_QFYX01000001.1 Protein Homology CDS 2640897 2641769 . - 0 ID=cds-WP_003413939.1;Parent=gene-DKM08_RS13135;Dbxref=GenBank:WP_003413939.1;Name=WP_003413939.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217217.1;locus_tag=DKM08_RS13135;product=inositol-1-monophosphatase SuhB;protein_id=WP_003413939.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2641892 2642689 . + . ID=gene-DKM08_RS13140;Name=ppgK;gbkey=Gene;gene=ppgK;gene_biotype=protein_coding;locus_tag=DKM08_RS13140;old_locus_tag=DKM08_13125 NZ_QFYX01000001.1 Protein Homology CDS 2641892 2642689 . + 0 ID=cds-WP_003413941.1;Parent=gene-DKM08_RS13140;Dbxref=GenBank:WP_003413941.1;Name=WP_003413941.1;Ontology_term=GO:0004340,GO:0047330;gbkey=CDS;gene=ppgK;go_function=glucokinase activity|0004340||IEA,polyphosphate-glucose phosphotransferase activity|0047330||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217218.1;locus_tag=DKM08_RS13140;product=polyphosphate--glucose phosphotransferase;protein_id=WP_003413941.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2642869 2644455 . + . ID=gene-DKM08_RS13145;Name=sigA;gbkey=Gene;gene=sigA;gene_biotype=protein_coding;locus_tag=DKM08_RS13145;old_locus_tag=DKM08_13130 NZ_QFYX01000001.1 Protein Homology CDS 2642869 2644455 . + 0 ID=cds-WP_003413944.1;Parent=gene-DKM08_RS13145;Dbxref=GenBank:WP_003413944.1;Name=WP_003413944.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217219.1;locus_tag=DKM08_RS13145;product=RNA polymerase sigma factor;protein_id=WP_003413944.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2644492 2644920 . + . ID=gene-DKM08_RS13150;Name=DKM08_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13150;old_locus_tag=DKM08_13135 NZ_QFYX01000001.1 Protein Homology CDS 2644492 2644920 . + 0 ID=cds-WP_003899440.1;Parent=gene-DKM08_RS13150;Dbxref=GenBank:WP_003899440.1;Name=WP_003899440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217220.1;locus_tag=DKM08_RS13150;product=RidA family protein;protein_id=WP_003899440.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2644848 2645237 . - . ID=gene-DKM08_RS13155;Name=DKM08_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13155;old_locus_tag=DKM08_13140 NZ_QFYX01000001.1 Protein Homology CDS 2644848 2645237 . - 0 ID=cds-WP_003413947.1;Parent=gene-DKM08_RS13155;Dbxref=GenBank:WP_003413947.1;Name=WP_003413947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217221.1;locus_tag=DKM08_RS13155;product=DUF952 domain-containing protein;protein_id=WP_003413947.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2645234 2645476 . - . ID=gene-DKM08_RS13160;Name=DKM08_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13160;old_locus_tag=DKM08_13145 NZ_QFYX01000001.1 Protein Homology CDS 2645234 2645476 . - 0 ID=cds-WP_049955294.1;Parent=gene-DKM08_RS13160;Dbxref=GenBank:WP_049955294.1;Name=WP_049955294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217222.1;locus_tag=DKM08_RS13160;product=hypothetical protein;protein_id=WP_049955294.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2645429 2645545 . + . ID=gene-DKM08_RS22770;Name=DKM08_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22770 NZ_QFYX01000001.1 Protein Homology CDS 2645429 2645545 . + 0 ID=cds-WP_015456423.1;Parent=gene-DKM08_RS22770;Dbxref=GenBank:WP_015456423.1;Name=WP_015456423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048765.1;locus_tag=DKM08_RS22770;product=DUF7455 domain-containing protein;protein_id=WP_015456423.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2645607 2646581 . + . ID=gene-DKM08_RS13165;Name=DKM08_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13165;old_locus_tag=DKM08_13150 NZ_QFYX01000001.1 Protein Homology CDS 2645607 2646581 . + 0 ID=cds-WP_003413953.1;Parent=gene-DKM08_RS13165;Dbxref=GenBank:WP_003413953.1;Name=WP_003413953.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217223.1;locus_tag=DKM08_RS13165;product=YihY/virulence factor BrkB family protein;protein_id=WP_003413953.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2646582 2646821 . - . ID=gene-DKM08_RS13170;Name=DKM08_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13170;old_locus_tag=DKM08_13155 NZ_QFYX01000001.1 Protein Homology CDS 2646582 2646821 . - 0 ID=cds-WP_003413954.1;Parent=gene-DKM08_RS13170;Dbxref=GenBank:WP_003413954.1;Name=WP_003413954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258553.1;locus_tag=DKM08_RS13170;product=DUF3039 domain-containing protein;protein_id=WP_003413954.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2646873 2647319 . + . ID=gene-DKM08_RS13175;Name=DKM08_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13175;old_locus_tag=DKM08_13160 NZ_QFYX01000001.1 Protein Homology CDS 2646873 2647319 . + 0 ID=cds-WP_010950762.1;Parent=gene-DKM08_RS13175;Dbxref=GenBank:WP_010950762.1;Name=WP_010950762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217225.1;locus_tag=DKM08_RS13175;product=DUF3099 domain-containing protein;protein_id=WP_010950762.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2647495 2648466 . + . ID=gene-DKM08_RS13180;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=DKM08_RS13180;old_locus_tag=DKM08_13165 NZ_QFYX01000001.1 Protein Homology CDS 2647495 2648466 . + 0 ID=cds-WP_003413958.1;Parent=gene-DKM08_RS13180;Dbxref=GenBank:WP_003413958.1;Name=WP_003413958.1;gbkey=CDS;gene=sigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217226.1;locus_tag=DKM08_RS13180;product=sigma-70 family RNA polymerase sigma factor SigB;protein_id=WP_003413958.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2648599 2649291 . + . ID=gene-DKM08_RS13185;Name=ideR;gbkey=Gene;gene=ideR;gene_biotype=protein_coding;locus_tag=DKM08_RS13185;old_locus_tag=DKM08_13170 NZ_QFYX01000001.1 Protein Homology CDS 2648599 2649291 . + 0 ID=cds-WP_003413962.1;Parent=gene-DKM08_RS13185;Dbxref=GenBank:WP_003413962.1;Name=WP_003413962.1;gbkey=CDS;gene=ideR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217227.1;locus_tag=DKM08_RS13185;product=iron-dependent transcriptional regulator IdeR;protein_id=WP_003413962.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2649304 2650362 . - . ID=gene-DKM08_RS13190;Name=DKM08_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13190;old_locus_tag=DKM08_13175 NZ_QFYX01000001.1 Protein Homology CDS 2649304 2650362 . - 0 ID=cds-WP_003413965.1;Parent=gene-DKM08_RS13190;Dbxref=GenBank:WP_003413965.1;Name=WP_003413965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217228.1;locus_tag=DKM08_RS13190;product=DUF4192 domain-containing protein;protein_id=WP_003413965.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2650475 2651881 . + . ID=gene-DKM08_RS13195;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=DKM08_RS13195;old_locus_tag=DKM08_13180 NZ_QFYX01000001.1 Protein Homology CDS 2650475 2651881 . + 0 ID=cds-WP_003900556.1;Parent=gene-DKM08_RS13195;Dbxref=GenBank:WP_003900556.1;Name=WP_003900556.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217229.1;locus_tag=DKM08_RS13195;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_003900556.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2652099 2653073 . + . ID=gene-DKM08_RS13200;Name=DKM08_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13200;old_locus_tag=DKM08_13185 NZ_QFYX01000001.1 Protein Homology CDS 2652099 2653073 . + 0 ID=cds-WP_003413968.1;Parent=gene-DKM08_RS13200;Dbxref=GenBank:WP_003413968.1;Name=WP_003413968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217230.1;locus_tag=DKM08_RS13200;product=proteasome assembly chaperone family protein;protein_id=WP_003413968.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2653132 2654157 . + . ID=gene-DKM08_RS13205;Name=DKM08_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13205;old_locus_tag=DKM08_13190 NZ_QFYX01000001.1 Protein Homology CDS 2653132 2654157 . + 0 ID=cds-WP_147020914.1;Parent=gene-DKM08_RS13205;Dbxref=GenBank:WP_147020914.1;Name=WP_147020914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217231.1;locus_tag=DKM08_RS13205;product=alpha/beta fold hydrolase;protein_id=WP_147020914.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2654206 2654892 . + . ID=gene-DKM08_RS13210;Name=DKM08_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13210;old_locus_tag=DKM08_13195 NZ_QFYX01000001.1 Protein Homology CDS 2654206 2654892 . + 0 ID=cds-WP_003413971.1;Parent=gene-DKM08_RS13210;Dbxref=GenBank:WP_003413971.1;Name=WP_003413971.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217232.1;locus_tag=DKM08_RS13210;product=PhzF family phenazine biosynthesis protein;protein_id=WP_003413971.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2654901 2655395 . - . ID=gene-DKM08_RS13215;Name=DKM08_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13215;old_locus_tag=DKM08_13200 NZ_QFYX01000001.1 Protein Homology CDS 2654901 2655395 . - 0 ID=cds-WP_003900559.1;Parent=gene-DKM08_RS13215;Dbxref=GenBank:WP_003900559.1;Name=WP_003900559.1;Ontology_term=GO:0020037,GO:0046872,GO:0062213;gbkey=CDS;go_function=heme binding|0020037||IEA,metal ion binding|0046872||IEA,peroxynitrite isomerase activity|0062213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217233.1;locus_tag=DKM08_RS13215;product=peroxynitrite isomerase;protein_id=WP_003900559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2655447 2655911 . - . ID=gene-DKM08_RS13220;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=DKM08_RS13220;old_locus_tag=DKM08_13205 NZ_QFYX01000001.1 Protein Homology CDS 2655447 2655911 . - 0 ID=cds-WP_003413973.1;Parent=gene-DKM08_RS13220;Dbxref=GenBank:WP_003413973.1;Name=WP_003413973.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217234.1;locus_tag=DKM08_RS13220;product=transcriptional regulator NrdR;protein_id=WP_003413973.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2656074 2656571 . - . ID=gene-DKM08_RS13225;Name=chiZ;gbkey=Gene;gene=chiZ;gene_biotype=protein_coding;locus_tag=DKM08_RS13225;old_locus_tag=DKM08_13210 NZ_QFYX01000001.1 Protein Homology CDS 2656074 2656571 . - 0 ID=cds-WP_003413974.1;Parent=gene-DKM08_RS13225;Dbxref=GenBank:WP_003413974.1;Name=WP_003413974.1;gbkey=CDS;gene=chiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217235.1;locus_tag=DKM08_RS13225;product=cell wall hydrolase ChiZ;protein_id=WP_003413974.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2656822 2657532 . + . ID=gene-DKM08_RS13230;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=DKM08_RS13230;old_locus_tag=DKM08_13215 NZ_QFYX01000001.1 Protein Homology CDS 2656822 2657532 . + 0 ID=cds-WP_019283510.1;Parent=gene-DKM08_RS13230;Dbxref=GenBank:WP_019283510.1;Name=WP_019283510.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217236.2;locus_tag=DKM08_RS13230;product=transcriptional repressor LexA;protein_id=WP_019283510.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2657554 2659653 . - . ID=gene-DKM08_RS13235;Name=DKM08_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13235;old_locus_tag=DKM08_13220 NZ_QFYX01000001.1 Protein Homology CDS 2657554 2659653 . - 0 ID=cds-WP_003900560.1;Parent=gene-DKM08_RS13235;Dbxref=GenBank:WP_003900560.1;Name=WP_003900560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217237.1;locus_tag=DKM08_RS13235;product=LGFP repeat-containing protein;protein_id=WP_003900560.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2659669 2659917 . + . ID=gene-DKM08_RS13240;Name=DKM08_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13240;old_locus_tag=DKM08_13225 NZ_QFYX01000001.1 Protein Homology CDS 2659669 2659917 . + 0 ID=cds-WP_003902343.1;Parent=gene-DKM08_RS13240;Dbxref=GenBank:WP_003902343.1;Name=WP_003902343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217238.1;locus_tag=DKM08_RS13240;product=hypothetical protein;protein_id=WP_003902343.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2659943 2661136 . + . ID=gene-DKM08_RS13245;Name=DKM08_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13245;old_locus_tag=DKM08_13230 NZ_QFYX01000001.1 Protein Homology CDS 2659943 2661136 . + 0 ID=cds-WP_003413979.1;Parent=gene-DKM08_RS13245;Dbxref=GenBank:WP_003413979.1;Name=WP_003413979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217239.1;locus_tag=DKM08_RS13245;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_003413979.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2661165 2662325 . - . ID=gene-DKM08_RS13250;Name=DKM08_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13250;old_locus_tag=DKM08_13235 NZ_QFYX01000001.1 Protein Homology CDS 2661165 2662325 . - 0 ID=cds-WP_010950764.1;Parent=gene-DKM08_RS13250;Dbxref=GenBank:WP_010950764.1;Name=WP_010950764.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217240.1;locus_tag=DKM08_RS13250;product=acyl-CoA dehydrogenase family protein;protein_id=WP_010950764.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2662461 2663891 . - . ID=gene-DKM08_RS13255;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=DKM08_RS13255;old_locus_tag=DKM08_13240 NZ_QFYX01000001.1 Protein Homology CDS 2662461 2663891 . - 0 ID=cds-WP_003911950.1;Parent=gene-DKM08_RS13255;Dbxref=GenBank:WP_003911950.1;Name=WP_003911950.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911950.1;locus_tag=DKM08_RS13255;product=GTPase HflX;protein_id=WP_003911950.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2663965 2664834 . - . ID=gene-DKM08_RS13260;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=DKM08_RS13260;old_locus_tag=DKM08_13245 NZ_QFYX01000001.1 Protein Homology CDS 2663965 2664834 . - 0 ID=cds-WP_003413987.1;Parent=gene-DKM08_RS13260;Dbxref=GenBank:WP_003413987.1;Name=WP_003413987.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217242.1;locus_tag=DKM08_RS13260;product=diaminopimelate epimerase;protein_id=WP_003413987.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2664859 2665803 . - . ID=gene-DKM08_RS13265;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=DKM08_RS13265;old_locus_tag=DKM08_13250 NZ_QFYX01000001.1 Protein Homology CDS 2664859 2665803 . - 0 ID=cds-WP_003413989.1;Parent=gene-DKM08_RS13265;Dbxref=GenBank:WP_003413989.1;Name=WP_003413989.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217243.1;locus_tag=DKM08_RS13265;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_003413989.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2665800 2666495 . - . ID=gene-DKM08_RS13270;Name=DKM08_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13270;old_locus_tag=DKM08_13255 NZ_QFYX01000001.1 Protein Homology CDS 2665800 2666495 . - 0 ID=cds-WP_003899452.1;Parent=gene-DKM08_RS13270;Dbxref=GenBank:WP_003899452.1;Name=WP_003899452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217244.1;locus_tag=DKM08_RS13270;product=hypothetical protein;protein_id=WP_003899452.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2666604 2667509 . - . ID=gene-DKM08_RS13275;Name=DKM08_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13275;old_locus_tag=DKM08_13260 NZ_QFYX01000001.1 Protein Homology CDS 2666604 2667509 . - 0 ID=cds-WP_010950765.1;Parent=gene-DKM08_RS13275;Dbxref=GenBank:WP_010950765.1;Name=WP_010950765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217245.1;locus_tag=DKM08_RS13275;product=DMT family transporter;protein_id=WP_010950765.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2667576 2668052 . + . ID=gene-DKM08_RS13280;Name=DKM08_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13280;old_locus_tag=DKM08_13265 NZ_QFYX01000001.1 Protein Homology CDS 2667576 2668052 . + 0 ID=cds-WP_003901458.1;Parent=gene-DKM08_RS13280;Dbxref=GenBank:WP_003901458.1;Name=WP_003901458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217246.1;locus_tag=DKM08_RS13280;product=hypothetical protein;protein_id=WP_003901458.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2668060 2669412 . + . ID=gene-DKM08_RS13285;Name=DKM08_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13285;old_locus_tag=DKM08_13270 NZ_QFYX01000001.1 Protein Homology CDS 2668060 2669412 . + 0 ID=cds-WP_003413997.1;Parent=gene-DKM08_RS13285;Dbxref=GenBank:WP_003413997.1;Name=WP_003413997.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217247.1;locus_tag=DKM08_RS13285;product=DUF349 domain-containing protein;protein_id=WP_003413997.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2669409 2670023 . - . ID=gene-DKM08_RS13290;Name=DKM08_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13290;old_locus_tag=DKM08_13275 NZ_QFYX01000001.1 Protein Homology CDS 2669409 2670023 . - 0 ID=cds-WP_003413999.1;Parent=gene-DKM08_RS13290;Dbxref=GenBank:WP_003413999.1;Name=WP_003413999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217248.1;locus_tag=DKM08_RS13290;product=hypothetical protein;protein_id=WP_003413999.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2670020 2671558 . - . ID=gene-DKM08_RS13295;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=DKM08_RS13295;old_locus_tag=DKM08_13280 NZ_QFYX01000001.1 Protein Homology CDS 2670020 2671558 . - 0 ID=cds-WP_003414001.1;Parent=gene-DKM08_RS13295;Dbxref=GenBank:WP_003414001.1;Name=WP_003414001.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217249.1;locus_tag=DKM08_RS13295;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_003414001.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2671855 2672709 . + . ID=gene-DKM08_RS13305;Name=DKM08_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13305;old_locus_tag=DKM08_13290 NZ_QFYX01000001.1 Protein Homology CDS 2671855 2672709 . + 0 ID=cds-WP_003899455.1;Parent=gene-DKM08_RS13305;Dbxref=GenBank:WP_003899455.1;Name=WP_003899455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217250.1;locus_tag=DKM08_RS13305;product=DUF5131 family protein;protein_id=WP_003899455.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2672594 2673586 . - . ID=gene-DKM08_RS13310;Name=DKM08_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13310;old_locus_tag=DKM08_13295 NZ_QFYX01000001.1 Protein Homology CDS 2672594 2673586 . - 0 ID=cds-WP_003899456.1;Parent=gene-DKM08_RS13310;Dbxref=GenBank:WP_003899456.1;Name=WP_003899456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217251.1;locus_tag=DKM08_RS13310;product=three-Cys-motif partner protein TcmP;protein_id=WP_003899456.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2673596 2674120 . - . ID=gene-DKM08_RS13315;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=DKM08_RS13315;old_locus_tag=DKM08_13300 NZ_QFYX01000001.1 Protein Homology CDS 2673596 2674120 . - 0 ID=cds-WP_003900562.1;Parent=gene-DKM08_RS13315;Dbxref=GenBank:WP_003900562.1;Name=WP_003900562.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217252.1;locus_tag=DKM08_RS13315;product=recombination regulator RecX;protein_id=WP_003900562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2674086 2676458 . - . ID=gene-DKM08_RS13320;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=DKM08_RS13320;old_locus_tag=DKM08_13305 NZ_QFYX01000001.1 Protein Homology CDS 2674086 2676458 . - 0 ID=cds-WP_003414006.1;Parent=gene-DKM08_RS13320;Dbxref=GenBank:WP_003414006.1;Name=WP_003414006.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217253.1;locus_tag=DKM08_RS13320;product=intein-containing recombinase RecA;protein_id=WP_003414006.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2676653 2676826 . + . ID=gene-DKM08_RS13325;Name=DKM08_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13325;old_locus_tag=DKM08_13310 NZ_QFYX01000001.1 Protein Homology CDS 2676653 2676826 . + 0 ID=cds-WP_003414008.1;Parent=gene-DKM08_RS13325;Dbxref=GenBank:WP_003414008.1;Name=WP_003414008.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414008.1;locus_tag=DKM08_RS13325;product=(2Fe-2S)-binding protein;protein_id=WP_003414008.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2676840 2677034 . - . ID=gene-DKM08_RS13330;Name=DKM08_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13330;old_locus_tag=DKM08_13315 NZ_QFYX01000001.1 Protein Homology CDS 2676840 2677034 . - 0 ID=cds-WP_031680673.1;Parent=gene-DKM08_RS13330;Dbxref=GenBank:WP_031680673.1;Name=WP_031680673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019513025.1;locus_tag=DKM08_RS13330;product=DUF3046 domain-containing protein;protein_id=WP_031680673.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2677057 2678223 . - . ID=gene-DKM08_RS13335;Name=DKM08_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13335;old_locus_tag=DKM08_13320 NZ_QFYX01000001.1 Protein Homology CDS 2677057 2678223 . - 0 ID=cds-WP_003901461.1;Parent=gene-DKM08_RS13335;Dbxref=GenBank:WP_003901461.1;Name=WP_003901461.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217255.1;locus_tag=DKM08_RS13335;product=glycosyltransferase;protein_id=WP_003901461.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2678267 2678716 . + . ID=gene-DKM08_RS13340;Name=ephG;gbkey=Gene;gene=ephG;gene_biotype=protein_coding;locus_tag=DKM08_RS13340;old_locus_tag=DKM08_13325 NZ_QFYX01000001.1 Protein Homology CDS 2678267 2678716 . + 0 ID=cds-WP_003414015.1;Parent=gene-DKM08_RS13340;Dbxref=GenBank:WP_003414015.1;Name=WP_003414015.1;gbkey=CDS;gene=ephG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217256.1;locus_tag=DKM08_RS13340;product=epoxide hydrolase;protein_id=WP_003414015.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2678948 2680440 . + . ID=gene-DKM08_RS13350;Name=DKM08_RS13350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS13350;old_locus_tag=DKM08_13335;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2678948 2680440 . + 0 ID=cds-DKM08_RS13350;Parent=gene-DKM08_RS13350;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177902.1;locus_tag=DKM08_RS13350;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2680464 2680678 . - . ID=gene-DKM08_RS21660;Name=DKM08_RS21660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21660;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2680464 2680678 . - 0 ID=cds-DKM08_RS21660;Parent=gene-DKM08_RS21660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007172553.1;locus_tag=DKM08_RS21660;product=DUF3046 domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2680778 2680987 . + . ID=gene-DKM08_RS21665;Name=DKM08_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21665 NZ_QFYX01000001.1 Protein Homology CDS 2680778 2680987 . + 0 ID=cds-WP_003918495.1;Parent=gene-DKM08_RS21665;Dbxref=GenBank:WP_003918495.1;Name=WP_003918495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918495.1;locus_tag=DKM08_RS21665;product=limonene-1%2C2-epoxide hydrolase family protein;protein_id=WP_003918495.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2680991 2681395 . + . ID=gene-DKM08_RS21670;Name=DKM08_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21670 NZ_QFYX01000001.1 Protein Homology CDS 2680991 2681395 . + 0 ID=cds-WP_186806927.1;Parent=gene-DKM08_RS21670;Dbxref=GenBank:WP_186806927.1;Name=WP_186806927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631471.1;locus_tag=DKM08_RS21670;product=DUF5313 domain-containing protein;protein_id=WP_186806927.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2681392 2682204 . - . ID=gene-DKM08_RS13360;Name=pspM;gbkey=Gene;gene=pspM;gene_biotype=protein_coding;locus_tag=DKM08_RS13360;old_locus_tag=DKM08_13345 NZ_QFYX01000001.1 Protein Homology CDS 2681392 2682204 . - 0 ID=cds-WP_003414026.1;Parent=gene-DKM08_RS13360;Dbxref=GenBank:WP_003414026.1;Name=WP_003414026.1;gbkey=CDS;gene=pspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217259.1;locus_tag=DKM08_RS13360;product=phage shock envelope stress response protein PspM;protein_id=WP_003414026.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2682223 2683035 . - . ID=gene-DKM08_RS13365;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=DKM08_RS13365;old_locus_tag=DKM08_13350 NZ_QFYX01000001.1 Protein Homology CDS 2682223 2683035 . - 0 ID=cds-WP_003414030.1;Parent=gene-DKM08_RS13365;Dbxref=GenBank:WP_003414030.1;Name=WP_003414030.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177903.1;locus_tag=DKM08_RS13365;product=phage shock protein PspA;protein_id=WP_003414030.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2683165 2683503 . - . ID=gene-DKM08_RS13370;Name=clgR;gbkey=Gene;gene=clgR;gene_biotype=protein_coding;locus_tag=DKM08_RS13370;old_locus_tag=DKM08_13355 NZ_QFYX01000001.1 Protein Homology CDS 2683165 2683503 . - 0 ID=cds-WP_003414032.1;Parent=gene-DKM08_RS13370;Dbxref=GenBank:WP_003414032.1;Name=WP_003414032.1;gbkey=CDS;gene=clgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217261.1;locus_tag=DKM08_RS13370;product=transcriptional regulator ClgR;protein_id=WP_003414032.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2683574 2684173 . - . ID=gene-DKM08_RS13375;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=DKM08_RS13375;old_locus_tag=DKM08_13360 NZ_QFYX01000001.1 Protein Homology CDS 2683574 2684173 . - 0 ID=cds-WP_003911983.1;Parent=gene-DKM08_RS13375;Dbxref=GenBank:WP_003911983.1;Name=WP_003911983.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911983.1;locus_tag=DKM08_RS13375;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_003911983.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2684234 2684758 . + . ID=gene-DKM08_RS13380;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=DKM08_RS13380;old_locus_tag=DKM08_13365 NZ_QFYX01000001.1 Protein Homology CDS 2684234 2684758 . + 0 ID=cds-WP_003414037.1;Parent=gene-DKM08_RS13380;Dbxref=GenBank:WP_003414037.1;Name=WP_003414037.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;gene=argA;go_function=N-acetyltransferase activity|0008080||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217263.1;locus_tag=DKM08_RS13380;product=amino-acid N-acetyltransferase;protein_id=WP_003414037.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2684827 2687478 . - . ID=gene-DKM08_RS13385;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=DKM08_RS13385;old_locus_tag=DKM08_13370 NZ_QFYX01000001.1 Protein Homology CDS 2684827 2687478 . - 0 ID=cds-WP_003414040.1;Parent=gene-DKM08_RS13385;Dbxref=GenBank:WP_003414040.1;Name=WP_003414040.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217264.1;locus_tag=DKM08_RS13385;product=DNA translocase FtsK;protein_id=WP_003414040.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2687477 2687791 . + . ID=gene-DKM08_RS13390;Name=DKM08_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13390;old_locus_tag=DKM08_13375 NZ_QFYX01000001.1 Protein Homology CDS 2687477 2687791 . + 0 ID=cds-WP_003414042.1;Parent=gene-DKM08_RS13390;Dbxref=GenBank:WP_003414042.1;Name=WP_003414042.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217265.1;locus_tag=DKM08_RS13390;product=putative quinol monooxygenase;protein_id=WP_003414042.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2687788 2688606 . + . ID=gene-DKM08_RS13395;Name=DKM08_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13395;old_locus_tag=DKM08_13380 NZ_QFYX01000001.1 Protein Homology CDS 2687788 2688606 . + 0 ID=cds-WP_003414045.1;Parent=gene-DKM08_RS13395;Dbxref=GenBank:WP_003414045.1;Name=WP_003414045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217266.1;locus_tag=DKM08_RS13395;product=Rv2750 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003414045.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2688610 2689500 . + . ID=gene-DKM08_RS13400;Name=DKM08_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13400;old_locus_tag=DKM08_13385 NZ_QFYX01000001.1 Protein Homology CDS 2688610 2689500 . + 0 ID=cds-WP_003899463.1;Parent=gene-DKM08_RS13400;Dbxref=GenBank:WP_003899463.1;Name=WP_003899463.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217267.1;locus_tag=DKM08_RS13400;product=class I SAM-dependent methyltransferase;protein_id=WP_003899463.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2689487 2691163 . - . ID=gene-DKM08_RS13405;Name=rnj;gbkey=Gene;gene=rnj;gene_biotype=protein_coding;locus_tag=DKM08_RS13405;old_locus_tag=DKM08_13390 NZ_QFYX01000001.1 Protein Homology CDS 2689487 2691163 . - 0 ID=cds-WP_003414049.1;Parent=gene-DKM08_RS13405;Dbxref=GenBank:WP_003414049.1;Name=WP_003414049.1;gbkey=CDS;gene=rnj;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217268.1;locus_tag=DKM08_RS13405;product=ribonuclease J;protein_id=WP_003414049.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2691194 2692096 . - . ID=gene-DKM08_RS13410;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=DKM08_RS13410;old_locus_tag=DKM08_13395 NZ_QFYX01000001.1 Protein Homology CDS 2691194 2692096 . - 0 ID=cds-WP_003900564.1;Parent=gene-DKM08_RS13410;Dbxref=GenBank:WP_003900564.1;Name=WP_003900564.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217269.1;locus_tag=DKM08_RS13410;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_003900564.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2692165 2692917 . - . ID=gene-DKM08_RS13415;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=DKM08_RS13415;old_locus_tag=DKM08_13400 NZ_QFYX01000001.1 Protein Homology CDS 2692165 2692917 . - 0 ID=cds-WP_003899465.1;Parent=gene-DKM08_RS13415;Dbxref=GenBank:WP_003899465.1;Name=WP_003899465.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217270.1;locus_tag=DKM08_RS13415;product=FAD-dependent thymidylate synthase;protein_id=WP_003899465.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2693161 2693436 . - . ID=gene-DKM08_RS13420;Name=DKM08_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13420;old_locus_tag=DKM08_13405 NZ_QFYX01000001.1 Protein Homology CDS 2693161 2693436 . - 0 ID=cds-WP_003414055.1;Parent=gene-DKM08_RS13420;Dbxref=GenBank:WP_003414055.1;Name=WP_003414055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293900.1;locus_tag=DKM08_RS13420;product=type I restriction endonuclease subunit S;protein_id=WP_003414055.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2693433 2695055 . - . ID=gene-DKM08_RS13425;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=DKM08_RS13425;old_locus_tag=DKM08_13410 NZ_QFYX01000001.1 Protein Homology CDS 2693433 2695055 . - 0 ID=cds-WP_003414057.1;Parent=gene-DKM08_RS13425;Dbxref=GenBank:WP_003414057.1;Name=WP_003414057.1;gbkey=CDS;gene=hsdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217272.1;locus_tag=DKM08_RS13425;product=type I restriction-modification system subunit M;protein_id=WP_003414057.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2695142 2695558 . - . ID=gene-DKM08_RS13430;Name=vapC21;gbkey=Gene;gene=vapC21;gene_biotype=protein_coding;locus_tag=DKM08_RS13430;old_locus_tag=DKM08_13415 NZ_QFYX01000001.1 Protein Homology CDS 2695142 2695558 . - 0 ID=cds-WP_003414059.1;Parent=gene-DKM08_RS13430;Dbxref=GenBank:WP_003414059.1;Name=WP_003414059.1;gbkey=CDS;gene=vapC21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217273.1;locus_tag=DKM08_RS13430;product=type II toxin-antitoxin system toxin ribonuclease C21;protein_id=WP_003414059.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2695555 2695821 . - . ID=gene-DKM08_RS13435;Name=DKM08_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13435;old_locus_tag=DKM08_13420 NZ_QFYX01000001.1 Protein Homology CDS 2695555 2695821 . - 0 ID=cds-WP_147020915.1;Parent=gene-DKM08_RS13435;Dbxref=GenBank:WP_147020915.1;Name=WP_147020915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217274.1;locus_tag=DKM08_RS13435;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_147020915.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2695847 2696242 . - . ID=gene-DKM08_RS13440;Name=DKM08_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13440;old_locus_tag=DKM08_13425 NZ_QFYX01000001.1 Protein Homology CDS 2695847 2696242 . - 0 ID=cds-WP_003414064.1;Parent=gene-DKM08_RS13440;Dbxref=GenBank:WP_003414064.1;Name=WP_003414064.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217275.1;locus_tag=DKM08_RS13440;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414064.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2696239 2696508 . - . ID=gene-DKM08_RS13445;Name=DKM08_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13445;old_locus_tag=DKM08_13430 NZ_QFYX01000001.1 Protein Homology CDS 2696239 2696508 . - 0 ID=cds-WP_003414066.1;Parent=gene-DKM08_RS13445;Dbxref=GenBank:WP_003414066.1;Name=WP_003414066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217276.1;locus_tag=DKM08_RS13445;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414066.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2696518 2697612 . - . ID=gene-DKM08_RS13450;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=DKM08_RS13450;old_locus_tag=DKM08_13435 NZ_QFYX01000001.1 Protein Homology CDS 2696518 2697612 . - 0 ID=cds-WP_003414068.1;Parent=gene-DKM08_RS13450;Dbxref=GenBank:WP_003414068.1;Name=WP_003414068.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;gene=hsdS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217277.1;locus_tag=DKM08_RS13450;product=restriction endonuclease subunit S;protein_id=WP_003414068.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2697609 2698028 . - . ID=gene-DKM08_RS13455;Name=DKM08_RS13455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS13455;old_locus_tag=DKM08_13440;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2697609 2698028 . - 0 ID=cds-DKM08_RS13455;Parent=gene-DKM08_RS13455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217278.1;locus_tag=DKM08_RS13455;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2698102 2698581 . - . ID=gene-DKM08_RS13465;Name=dfrA;gbkey=Gene;gene=dfrA;gene_biotype=protein_coding;locus_tag=DKM08_RS13465;old_locus_tag=DKM08_13450 NZ_QFYX01000001.1 Protein Homology CDS 2698102 2698581 . - 0 ID=cds-WP_003414073.1;Parent=gene-DKM08_RS13465;Dbxref=GenBank:WP_003414073.1;Name=WP_003414073.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217279.1;locus_tag=DKM08_RS13465;product=dihydrofolate reductase;protein_id=WP_003414073.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2698652 2699452 . - . ID=gene-DKM08_RS13470;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=DKM08_RS13470;old_locus_tag=DKM08_13455 NZ_QFYX01000001.1 Protein Homology CDS 2698652 2699452 . - 0 ID=cds-WP_003911953.1;Parent=gene-DKM08_RS13470;Dbxref=GenBank:WP_003911953.1;Name=WP_003911953.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875188.1;locus_tag=DKM08_RS13470;product=thymidylate synthase;protein_id=WP_003911953.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2699608 2700345 . + . ID=gene-DKM08_RS13475;Name=DKM08_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13475;old_locus_tag=DKM08_13460 NZ_QFYX01000001.1 Protein Homology CDS 2699608 2700345 . + 0 ID=cds-WP_003414079.1;Parent=gene-DKM08_RS13475;Dbxref=GenBank:WP_003414079.1;Name=WP_003414079.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217281.1;locus_tag=DKM08_RS13475;product=dienelactone hydrolase family protein;protein_id=WP_003414079.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2700560 2701342 . - . ID=gene-DKM08_RS13480;Name=DKM08_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13480;old_locus_tag=DKM08_13465 NZ_QFYX01000001.1 Protein Homology CDS 2700560 2701342 . - 0 ID=cds-WP_003414081.1;Parent=gene-DKM08_RS13480;Dbxref=GenBank:WP_003414081.1;Name=WP_003414081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177905.1;locus_tag=DKM08_RS13480;product=SDR family oxidoreductase;protein_id=WP_003414081.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2701339 2701692 . - . ID=gene-DKM08_RS13485;Name=DKM08_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13485;old_locus_tag=DKM08_13470 NZ_QFYX01000001.1 Protein Homology CDS 2701339 2701692 . - 0 ID=cds-WP_003900567.1;Parent=gene-DKM08_RS13485;Dbxref=GenBank:WP_003900567.1;Name=WP_003900567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217283.1;locus_tag=DKM08_RS13485;product=hypothetical protein;protein_id=WP_003900567.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2701575 2701865 . - . ID=gene-DKM08_RS22190;Name=DKM08_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22190;old_locus_tag=DKM08_13475 NZ_QFYX01000001.1 Protein Homology CDS 2701575 2701865 . - 0 ID=cds-WP_003899467.1;Parent=gene-DKM08_RS22190;Dbxref=GenBank:WP_003899467.1;Name=WP_003899467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414083.1;locus_tag=DKM08_RS22190;product=hypothetical protein;protein_id=WP_003899467.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2701866 2703050 . - . ID=gene-DKM08_RS13495;Name=DKM08_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13495;old_locus_tag=DKM08_13480 NZ_QFYX01000001.1 Protein Homology CDS 2701866 2703050 . - 0 ID=cds-WP_003414085.1;Parent=gene-DKM08_RS13495;Dbxref=GenBank:WP_003414085.1;Name=WP_003414085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177906.1;locus_tag=DKM08_RS13495;product=PPE family protein;protein_id=WP_003414085.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2703130 2703957 . - . ID=gene-DKM08_RS13500;Name=DKM08_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13500;old_locus_tag=DKM08_13485 NZ_QFYX01000001.1 Protein Homology CDS 2703130 2703957 . - 0 ID=cds-WP_003414086.1;Parent=gene-DKM08_RS13500;Dbxref=GenBank:WP_003414086.1;Name=WP_003414086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177907.1;locus_tag=DKM08_RS13500;product=PPE family protein%2C SVP subgroup;protein_id=WP_003414086.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2704281 2705429 . - . ID=gene-DKM08_RS13505;Name=DKM08_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13505;old_locus_tag=DKM08_13490 NZ_QFYX01000001.1 Protein Homology CDS 2704281 2705429 . - 0 ID=cds-WP_003414088.1;Parent=gene-DKM08_RS13505;Dbxref=GenBank:WP_003414088.1;Name=WP_003414088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177677.1;locus_tag=DKM08_RS13505;product=PPE family protein;protein_id=WP_003414088.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2705553 2706005 . - . ID=gene-DKM08_RS13510;Name=DKM08_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13510;old_locus_tag=DKM08_13495 NZ_QFYX01000001.1 Protein Homology CDS 2705553 2706005 . - 0 ID=cds-WP_003414091.1;Parent=gene-DKM08_RS13510;Dbxref=GenBank:WP_003414091.1;Name=WP_003414091.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217287.1;locus_tag=DKM08_RS13510;product=flavodoxin family protein;protein_id=WP_003414091.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2706091 2706564 . - . ID=gene-DKM08_RS13515;Name=DKM08_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13515;old_locus_tag=DKM08_13500 NZ_QFYX01000001.1 Protein Homology CDS 2706091 2706564 . - 0 ID=cds-WP_003414097.1;Parent=gene-DKM08_RS13515;Dbxref=GenBank:WP_003414097.1;Name=WP_003414097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217288.1;locus_tag=DKM08_RS13515;product=hypothetical protein;protein_id=WP_003414097.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2706576 2707313 . - . ID=gene-DKM08_RS13520;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=DKM08_RS13520;old_locus_tag=DKM08_13505 NZ_QFYX01000001.1 Protein Homology CDS 2706576 2707313 . - 0 ID=cds-WP_011799290.1;Parent=gene-DKM08_RS13520;Dbxref=GenBank:WP_011799290.1;Name=WP_011799290.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217289.1;locus_tag=DKM08_RS13520;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_011799290.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2707324 2707728 . - . ID=gene-DKM08_RS13525;Name=DKM08_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13525;old_locus_tag=DKM08_13510 NZ_QFYX01000001.1 Protein Homology CDS 2707324 2707728 . - 0 ID=cds-WP_003900570.1;Parent=gene-DKM08_RS13525;Dbxref=GenBank:WP_003900570.1;Name=WP_003900570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217290.1;locus_tag=DKM08_RS13525;product=hypothetical protein;protein_id=WP_003900570.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2707785 2708342 . + . ID=gene-DKM08_RS13530;Name=DKM08_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13530;old_locus_tag=DKM08_13515 NZ_QFYX01000001.1 Protein Homology CDS 2707785 2708342 . + 0 ID=cds-WP_003899472.1;Parent=gene-DKM08_RS13530;Dbxref=GenBank:WP_003899472.1;Name=WP_003899472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899472.1;locus_tag=DKM08_RS13530;product=GNAT family N-acetyltransferase;protein_id=WP_003899472.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2708346 2709437 . - . ID=gene-DKM08_RS13535;Name=DKM08_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13535;old_locus_tag=DKM08_13520 NZ_QFYX01000001.1 Protein Homology CDS 2708346 2709437 . - 0 ID=cds-WP_003900572.1;Parent=gene-DKM08_RS13535;Dbxref=GenBank:WP_003900572.1;Name=WP_003900572.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900572.1;locus_tag=DKM08_RS13535;product=PDR/VanB family oxidoreductase;protein_id=WP_003900572.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2709457 2710527 . - . ID=gene-DKM08_RS13540;Name=DKM08_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13540;old_locus_tag=DKM08_13525 NZ_QFYX01000001.1 Protein Homology CDS 2709457 2710527 . - 0 ID=cds-WP_003414107.1;Parent=gene-DKM08_RS13540;Dbxref=GenBank:WP_003414107.1;Name=WP_003414107.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217293.1;locus_tag=DKM08_RS13540;product=metal-dependent hydrolase;protein_id=WP_003414107.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2710685 2711155 . - . ID=gene-DKM08_RS13545;Name=DKM08_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13545;old_locus_tag=DKM08_13530 NZ_QFYX01000001.1 Protein Homology CDS 2710685 2711155 . - 0 ID=cds-WP_003899475.1;Parent=gene-DKM08_RS13545;Dbxref=GenBank:WP_003899475.1;Name=WP_003899475.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217294.1;locus_tag=DKM08_RS13545;product=SRPBCC family protein;protein_id=WP_003899475.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2711187 2711726 . - . ID=gene-DKM08_RS13550;Name=DKM08_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13550;old_locus_tag=DKM08_13535 NZ_QFYX01000001.1 Protein Homology CDS 2711187 2711726 . - 0 ID=cds-WP_003414111.1;Parent=gene-DKM08_RS13550;Dbxref=GenBank:WP_003414111.1;Name=WP_003414111.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939105.1;locus_tag=DKM08_RS13550;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_003414111.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2711792 2712906 . + . ID=gene-DKM08_RS13555;Name=ald;gbkey=Gene;gene=ald;gene_biotype=pseudogene;locus_tag=DKM08_RS13555;old_locus_tag=DKM08_13540;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2711792 2712906 . + 0 ID=cds-DKM08_RS13555;Parent=gene-DKM08_RS13555;Note=frameshifted;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217296.1;locus_tag=DKM08_RS13555;product=alanine dehydrogenase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2712921 2713955 . - . ID=gene-DKM08_RS13560;Name=DKM08_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13560;old_locus_tag=DKM08_13545 NZ_QFYX01000001.1 Protein Homology CDS 2712921 2713955 . - 0 ID=cds-WP_003899478.1;Parent=gene-DKM08_RS13560;Dbxref=GenBank:WP_003899478.1;Name=WP_003899478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217297.1;locus_tag=DKM08_RS13560;product=nitronate monooxygenase;protein_id=WP_003899478.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2714016 2715332 . - . ID=gene-DKM08_RS13565;Name=pepR;gbkey=Gene;gene=pepR;gene_biotype=protein_coding;locus_tag=DKM08_RS13565;old_locus_tag=DKM08_13550 NZ_QFYX01000001.1 Protein Homology CDS 2714016 2715332 . - 0 ID=cds-WP_003414119.1;Parent=gene-DKM08_RS13565;Dbxref=GenBank:WP_003414119.1;Name=WP_003414119.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pepR;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217298.1;locus_tag=DKM08_RS13565;product=M16 family metallopeptidase;protein_id=WP_003414119.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2715310 2717568 . - . ID=gene-DKM08_RS13570;Name=gpsI;gbkey=Gene;gene=gpsI;gene_biotype=protein_coding;locus_tag=DKM08_RS13570;old_locus_tag=DKM08_13555 NZ_QFYX01000001.1 Protein Homology CDS 2715310 2717568 . - 0 ID=cds-WP_003414124.1;Parent=gene-DKM08_RS13570;Dbxref=GenBank:WP_003414124.1;Name=WP_003414124.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=gpsI;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217299.1;locus_tag=DKM08_RS13570;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_003414124.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2717922 2718437 . - . ID=gene-DKM08_RS13575;Name=lppU;gbkey=Gene;gene=lppU;gene_biotype=protein_coding;locus_tag=DKM08_RS13575;old_locus_tag=DKM08_13560 NZ_QFYX01000001.1 Protein Homology CDS 2717922 2718437 . - 0 ID=cds-WP_003899480.1;Parent=gene-DKM08_RS13575;Dbxref=GenBank:WP_003899480.1;Name=WP_003899480.1;gbkey=CDS;gene=lppU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217300.1;locus_tag=DKM08_RS13575;product=LppU family putative lipoprotein;protein_id=WP_003899480.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2718450 2718719 . - . ID=gene-DKM08_RS13580;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=DKM08_RS13580;old_locus_tag=DKM08_13565 NZ_QFYX01000001.1 Protein Homology CDS 2718450 2718719 . - 0 ID=cds-WP_003414128.1;Parent=gene-DKM08_RS13580;Dbxref=GenBank:WP_003414128.1;Name=WP_003414128.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559497.1;locus_tag=DKM08_RS13580;product=30S ribosomal protein S15;protein_id=WP_003414128.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2718876 2719850 . - . ID=gene-DKM08_RS13585;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=DKM08_RS13585;old_locus_tag=DKM08_13570 NZ_QFYX01000001.1 Protein Homology CDS 2718876 2719850 . - 0 ID=cds-WP_003911989.1;Parent=gene-DKM08_RS13585;Dbxref=GenBank:WP_003911989.1;Name=WP_003911989.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911989.1;locus_tag=DKM08_RS13585;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_003911989.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2720082 2721845 . + . ID=gene-DKM08_RS13590;Name=DKM08_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13590;old_locus_tag=DKM08_13575 NZ_QFYX01000001.1 Protein Homology CDS 2720082 2721845 . + 0 ID=cds-WP_003414134.1;Parent=gene-DKM08_RS13590;Dbxref=GenBank:WP_003414134.1;Name=WP_003414134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217303.1;locus_tag=DKM08_RS13590;product=AAA family ATPase;protein_id=WP_003414134.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2721930 2722616 . + . ID=gene-DKM08_RS13595;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=DKM08_RS13595;old_locus_tag=DKM08_13580 NZ_QFYX01000001.1 Protein Homology CDS 2721930 2722616 . + 0 ID=cds-WP_010950773.1;Parent=gene-DKM08_RS13595;Dbxref=GenBank:WP_010950773.1;Name=WP_010950773.1;gbkey=CDS;gene=mntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217304.1;locus_tag=DKM08_RS13595;product=manganese-binding transcriptional regulator MntR;protein_id=WP_010950773.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2722677 2723909 . - . ID=gene-DKM08_RS13600;Name=DKM08_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13600;old_locus_tag=DKM08_13585 NZ_QFYX01000001.1 Protein Homology CDS 2722677 2723909 . - 0 ID=cds-WP_003414139.1;Parent=gene-DKM08_RS13600;Dbxref=GenBank:WP_003414139.1;Name=WP_003414139.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217305.1;locus_tag=DKM08_RS13600;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003414139.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2723935 2725140 . - . ID=gene-DKM08_RS13605;Name=DKM08_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13605;old_locus_tag=DKM08_13590 NZ_QFYX01000001.1 Protein Homology CDS 2723935 2725140 . - 0 ID=cds-WP_003414142.1;Parent=gene-DKM08_RS13605;Dbxref=GenBank:WP_003414142.1;Name=WP_003414142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217306.3;locus_tag=DKM08_RS13605;product=lipid-transfer protein;protein_id=WP_003414142.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2725173 2726552 . - . ID=gene-DKM08_RS13610;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=DKM08_RS13610;old_locus_tag=DKM08_13595 NZ_QFYX01000001.1 Protein Homology CDS 2725173 2726552 . - 0 ID=cds-WP_003899482.1;Parent=gene-DKM08_RS13610;Dbxref=GenBank:WP_003899482.1;Name=WP_003899482.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=DKM08_RS13610;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003899482.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2726552 2727133 . - . ID=gene-DKM08_RS13615;Name=DKM08_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13615;old_locus_tag=DKM08_13600 NZ_QFYX01000001.1 Protein Homology CDS 2726552 2727133 . - 0 ID=cds-WP_023349582.1;Parent=gene-DKM08_RS13615;Dbxref=GenBank:WP_023349582.1;Name=WP_023349582.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=DKM08_RS13615;product=IS607-like element IS1602 family transposase;protein_id=WP_023349582.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2727335 2728231 . - . ID=gene-DKM08_RS13620;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=DKM08_RS13620;old_locus_tag=DKM08_13605 NZ_QFYX01000001.1 Protein Homology CDS 2727335 2728231 . - 0 ID=cds-WP_003414147.1;Parent=gene-DKM08_RS13620;Dbxref=GenBank:WP_003414147.1;Name=WP_003414147.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217309.1;locus_tag=DKM08_RS13620;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_003414147.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2728228 2728911 . - . ID=gene-DKM08_RS13625;Name=pptT;gbkey=Gene;gene=pptT;gene_biotype=protein_coding;locus_tag=DKM08_RS13625;old_locus_tag=DKM08_13610 NZ_QFYX01000001.1 Protein Homology CDS 2728228 2728911 . - 0 ID=cds-WP_003414149.1;Parent=gene-DKM08_RS13625;Dbxref=GenBank:WP_003414149.1;Name=WP_003414149.1;gbkey=CDS;gene=pptT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217310.1;locus_tag=DKM08_RS13625;product=4'-phosphopantetheinyl transferase;protein_id=WP_003414149.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2728908 2729882 . - . ID=gene-DKM08_RS13630;Name=DKM08_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13630;old_locus_tag=DKM08_13615 NZ_QFYX01000001.1 Protein Homology CDS 2728908 2729882 . - 0 ID=cds-WP_003414151.1;Parent=gene-DKM08_RS13630;Dbxref=GenBank:WP_003414151.1;Name=WP_003414151.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217311.1;locus_tag=DKM08_RS13630;product=metallophosphoesterase family protein;protein_id=WP_003414151.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2730027 2730590 . - . ID=gene-DKM08_RS13635;Name=lppV;gbkey=Gene;gene=lppV;gene_biotype=protein_coding;locus_tag=DKM08_RS13635;old_locus_tag=DKM08_13620 NZ_QFYX01000001.1 Protein Homology CDS 2730027 2730590 . - 0 ID=cds-WP_003414153.1;Parent=gene-DKM08_RS13635;Dbxref=GenBank:WP_003414153.1;Name=WP_003414153.1;gbkey=CDS;gene=lppV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217312.1;locus_tag=DKM08_RS13635;product=LppA family lipoprotein;protein_id=WP_003414153.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2730590 2732278 . - . ID=gene-DKM08_RS13640;Name=DKM08_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13640;old_locus_tag=DKM08_13625 NZ_QFYX01000001.1 Protein Homology CDS 2730590 2732278 . - 0 ID=cds-WP_003414155.1;Parent=gene-DKM08_RS13640;Dbxref=GenBank:WP_003414155.1;Name=WP_003414155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217313.1;locus_tag=DKM08_RS13640;product=alpha/beta hydrolase family protein;protein_id=WP_003414155.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2732282 2732608 . - . ID=gene-DKM08_RS13645;Name=DKM08_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13645;old_locus_tag=DKM08_13630 NZ_QFYX01000001.1 Protein Homology CDS 2732282 2732608 . - 0 ID=cds-WP_003414157.1;Parent=gene-DKM08_RS13645;Dbxref=GenBank:WP_003414157.1;Name=WP_003414157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217314.1;locus_tag=DKM08_RS13645;product=hypothetical protein;protein_id=WP_003414157.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2732781 2733374 . + . ID=gene-DKM08_RS13650;Name=DKM08_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13650;old_locus_tag=DKM08_13635 NZ_QFYX01000001.1 Protein Homology CDS 2732781 2733374 . + 0 ID=cds-WP_178136156.1;Parent=gene-DKM08_RS13650;Dbxref=GenBank:WP_178136156.1;Name=WP_178136156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978043.1;locus_tag=DKM08_RS13650;product=DUF3558 family protein;protein_id=WP_178136156.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2733393 2735042 . + . ID=gene-DKM08_RS13655;Name=DKM08_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13655;old_locus_tag=DKM08_13640 NZ_QFYX01000001.1 Protein Homology CDS 2733393 2735042 . + 0 ID=cds-WP_003899485.1;Parent=gene-DKM08_RS13655;Dbxref=GenBank:WP_003899485.1;Name=WP_003899485.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217316.1;locus_tag=DKM08_RS13655;product=CocE/NonD family hydrolase;protein_id=WP_003899485.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2735144 2735500 . - . ID=gene-DKM08_RS13660;Name=mazF9;gbkey=Gene;gene=mazF9;gene_biotype=protein_coding;gene_synonym=mazF-mt1;locus_tag=DKM08_RS13660;old_locus_tag=DKM08_13645 NZ_QFYX01000001.1 Protein Homology CDS 2735144 2735500 . - 0 ID=cds-WP_003414166.1;Parent=gene-DKM08_RS13660;Dbxref=GenBank:WP_003414166.1;Name=WP_003414166.1;gbkey=CDS;gene=mazF9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217317.1;locus_tag=DKM08_RS13660;product=type II toxin-antitoxin system toxin endoribonuclease MazF9;protein_id=WP_003414166.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2735484 2735714 . - . ID=gene-DKM08_RS13665;Name=mazE9;gbkey=Gene;gene=mazE9;gene_biotype=protein_coding;locus_tag=DKM08_RS13665;old_locus_tag=DKM08_13650 NZ_QFYX01000001.1 Protein Homology CDS 2735484 2735714 . - 0 ID=cds-WP_003901465.1;Parent=gene-DKM08_RS13665;Dbxref=GenBank:WP_003901465.1;Name=WP_003901465.1;gbkey=CDS;gene=mazE9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411507.1;locus_tag=DKM08_RS13665;product=type II toxin-antitoxin system antitoxin MazE9;protein_id=WP_003901465.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2735757 2736800 . - . ID=gene-DKM08_RS13670;Name=DKM08_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13670;old_locus_tag=DKM08_13655 NZ_QFYX01000001.1 Protein Homology CDS 2735757 2736800 . - 0 ID=cds-WP_003414172.1;Parent=gene-DKM08_RS13670;Dbxref=GenBank:WP_003414172.1;Name=WP_003414172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217318.1;locus_tag=DKM08_RS13670;product=DUF2293 domain-containing protein;protein_id=WP_003414172.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2736799 2737266 . + . ID=gene-DKM08_RS22195;Name=DKM08_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22195 NZ_QFYX01000001.1 Protein Homology CDS 2736799 2737266 . + 0 ID=cds-WP_003414177.1;Parent=gene-DKM08_RS22195;Dbxref=GenBank:WP_003414177.1;Name=WP_003414177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.6;locus_tag=DKM08_RS22195;product=DUF1778 domain-containing protein;protein_id=WP_003414177.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2737442 2737696 . - . ID=gene-DKM08_RS21675;Name=DKM08_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21675 NZ_QFYX01000001.1 GeneMarkS-2+ CDS 2737442 2737696 . - 0 ID=cds-WP_003917684.1;Parent=gene-DKM08_RS21675;Dbxref=GenBank:WP_003917684.1;Name=WP_003917684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21675;product=hypothetical protein;protein_id=WP_003917684.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2737844 2738248 . + . ID=gene-DKM08_RS13685;Name=DKM08_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13685;old_locus_tag=DKM08_13670 NZ_QFYX01000001.1 Protein Homology CDS 2737844 2738248 . + 0 ID=cds-WP_003414181.1;Parent=gene-DKM08_RS13685;Dbxref=GenBank:WP_003414181.1;Name=WP_003414181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=DKM08_RS13685;product=hypothetical protein;protein_id=WP_003414181.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2738245 2738436 . + . ID=gene-DKM08_RS13690;Name=DKM08_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13690;old_locus_tag=DKM08_13675 NZ_QFYX01000001.1 Protein Homology CDS 2738245 2738436 . + 0 ID=cds-WP_003414184.1;Parent=gene-DKM08_RS13690;Dbxref=GenBank:WP_003414184.1;Name=WP_003414184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217322.1;locus_tag=DKM08_RS13690;product=hypothetical protein;protein_id=WP_003414184.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2738653 2738937 . + . ID=gene-DKM08_RS22200;Name=DKM08_RS22200;end_range=2738937,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22200;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2738653 2738937 . + 0 ID=cds-DKM08_RS22200;Parent=gene-DKM08_RS22200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2738937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=DKM08_RS22200;partial=true;product=integrase catalytic domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2738962 2739789 . + . ID=gene-DKM08_RS22555;Name=DKM08_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22555;old_locus_tag=DKM08_13680 NZ_QFYX01000001.1 Protein Homology CDS 2738962 2739789 . + 0 ID=cds-WP_323755006.1;Parent=gene-DKM08_RS22555;Dbxref=GenBank:WP_323755006.1;Name=WP_323755006.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=DKM08_RS22555;product=integrase catalytic domain-containing protein;protein_id=WP_323755006.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2740023 2740280 . + . ID=gene-DKM08_RS13700;Name=DKM08_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13700;old_locus_tag=DKM08_13685 NZ_QFYX01000001.1 Protein Homology CDS 2740023 2740280 . + 0 ID=cds-WP_003899489.1;Parent=gene-DKM08_RS13700;Dbxref=GenBank:WP_003899489.1;Name=WP_003899489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217324.1;locus_tag=DKM08_RS13700;product=hypothetical protein;protein_id=WP_003899489.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2740385 2740696 . + . ID=gene-DKM08_RS13705;Name=DKM08_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13705;old_locus_tag=DKM08_13690 NZ_QFYX01000001.1 Protein Homology CDS 2740385 2740696 . + 0 ID=cds-WP_010950777.1;Parent=gene-DKM08_RS13705;Dbxref=GenBank:WP_010950777.1;Name=WP_010950777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217325.1;locus_tag=DKM08_RS13705;product=hypothetical protein;protein_id=WP_010950777.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2740718 2740957 . - . ID=gene-DKM08_RS13710;Name=DKM08_RS13710;end_range=2740957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS13710;old_locus_tag=DKM08_13695;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2740718 2740957 . - 0 ID=cds-DKM08_RS13710;Parent=gene-DKM08_RS13710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2740957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017835819.1;locus_tag=DKM08_RS13710;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2741116 2741724 . + . ID=gene-DKM08_RS13715;Name=DKM08_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13715;old_locus_tag=DKM08_13700 NZ_QFYX01000001.1 Protein Homology CDS 2741116 2741724 . + 0 ID=cds-WP_003414195.1;Parent=gene-DKM08_RS13715;Dbxref=GenBank:WP_003414195.1;Name=WP_003414195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217327.1;locus_tag=DKM08_RS13715;product=hypothetical protein;protein_id=WP_003414195.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2741795 2743204 . + . ID=gene-DKM08_RS13720;Name=DKM08_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13720;old_locus_tag=DKM08_13705 NZ_QFYX01000001.1 Protein Homology CDS 2741795 2743204 . + 0 ID=cds-WP_003414198.1;Parent=gene-DKM08_RS13720;Dbxref=GenBank:WP_003414198.1;Name=WP_003414198.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=DKM08_RS13720;product=DDE-type integrase/transposase/recombinase;protein_id=WP_003414198.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2743201 2744013 . + . ID=gene-DKM08_RS13725;Name=DKM08_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13725;old_locus_tag=DKM08_13710 NZ_QFYX01000001.1 Protein Homology CDS 2743201 2744013 . + 0 ID=cds-WP_003414201.1;Parent=gene-DKM08_RS13725;Dbxref=GenBank:WP_003414201.1;Name=WP_003414201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217329.1;locus_tag=DKM08_RS13725;product=ExeA family protein;protein_id=WP_003414201.1;transl_table=11 NZ_QFYX01000001.1 RefSeq direct_repeat 2744162 2745447 . + . ID=id-NZ_QFYX01000001.1:2744162..2745447;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2744162..2744197;rpt_unit_seq=gtttccgtcccctctcggggttttgggtctgacgac NZ_QFYX01000001.1 RefSeq gene 2745545 2746806 . - . ID=gene-DKM08_RS13730;Name=DKM08_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13730;old_locus_tag=DKM08_13715 NZ_QFYX01000001.1 Protein Homology CDS 2746518 2746806 . - 0 ID=cds-WP_087902221.1;Parent=gene-DKM08_RS13730;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=DKM08_RS13730;product=IS3-like element IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_QFYX01000001.1 Protein Homology CDS 2745545 2746518 . - 2 ID=cds-WP_087902221.1;Parent=gene-DKM08_RS13730;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=DKM08_RS13730;product=IS3-like element IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_QFYX01000001.1 RefSeq direct_repeat 2746917 2748714 . + . ID=id-NZ_QFYX01000001.1:2746917..2748714;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2746917..2746952;rpt_unit_seq=gtttccgtcccctctcggggttttgggtctgacgac NZ_QFYX01000001.1 RefSeq gene 2748763 2749104 . - . ID=gene-DKM08_RS13735;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=DKM08_RS13735;old_locus_tag=DKM08_13720 NZ_QFYX01000001.1 Protein Homology CDS 2748763 2749104 . - 0 ID=cds-WP_003414276.1;Parent=gene-DKM08_RS13735;Dbxref=GenBank:WP_003414276.1;Name=WP_003414276.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217332.1;locus_tag=DKM08_RS13735;product=CRISPR-associated endonuclease Cas2;protein_id=WP_003414276.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2749105 2750121 . - . ID=gene-DKM08_RS13740;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=DKM08_RS13740;old_locus_tag=DKM08_13725 NZ_QFYX01000001.1 Protein Homology CDS 2749105 2750121 . - 0 ID=cds-WP_003414279.1;Parent=gene-DKM08_RS13740;Dbxref=GenBank:WP_003414279.1;Name=WP_003414279.1;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217333.1;locus_tag=DKM08_RS13740;product=CRISPR-associated endonuclease Cas1;protein_id=WP_003414279.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2750134 2751426 . - . ID=gene-DKM08_RS13745;Name=csm6;gbkey=Gene;gene=csm6;gene_biotype=pseudogene;locus_tag=DKM08_RS13745;old_locus_tag=DKM08_13730;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2750134 2751426 . - 0 ID=cds-DKM08_RS13745;Parent=gene-DKM08_RS13745;Note=internal stop;Ontology_term=GO:0043571;gbkey=CDS;gene=csm6;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF021196.6;locus_tag=DKM08_RS13745;product=type III-A CRISPR-associated CARF protein Csm6;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2751378 2752505 . - . ID=gene-DKM08_RS13750;Name=csm5;gbkey=Gene;gene=csm5;gene_biotype=protein_coding;locus_tag=DKM08_RS13750;old_locus_tag=DKM08_13735 NZ_QFYX01000001.1 Protein Homology CDS 2751378 2752505 . - 0 ID=cds-WP_003414285.1;Parent=gene-DKM08_RS13750;Dbxref=GenBank:WP_003414285.1;Name=WP_003414285.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm5;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217335.1;locus_tag=DKM08_RS13750;product=type III-A CRISPR-associated RAMP protein Csm5;protein_id=WP_003414285.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2752502 2753410 . - . ID=gene-DKM08_RS13755;Name=csm4;gbkey=Gene;gene=csm4;gene_biotype=protein_coding;locus_tag=DKM08_RS13755;old_locus_tag=DKM08_13740 NZ_QFYX01000001.1 Protein Homology CDS 2752502 2753410 . - 0 ID=cds-WP_003414288.1;Parent=gene-DKM08_RS13755;Dbxref=GenBank:WP_003414288.1;Name=WP_003414288.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217336.1;locus_tag=DKM08_RS13755;product=type III-A CRISPR-associated RAMP protein Csm4;protein_id=WP_003414288.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2753391 2754101 . - . ID=gene-DKM08_RS13760;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=DKM08_RS13760;old_locus_tag=DKM08_13745 NZ_QFYX01000001.1 Protein Homology CDS 2753391 2754101 . - 0 ID=cds-WP_003414292.1;Parent=gene-DKM08_RS13760;Dbxref=GenBank:WP_003414292.1;Name=WP_003414292.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217337.1;locus_tag=DKM08_RS13760;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=WP_003414292.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2754111 2754485 . - . ID=gene-DKM08_RS13765;Name=csm2;gbkey=Gene;gene=csm2;gene_biotype=protein_coding;locus_tag=DKM08_RS13765;old_locus_tag=DKM08_13750 NZ_QFYX01000001.1 Protein Homology CDS 2754111 2754485 . - 0 ID=cds-WP_003414296.1;Parent=gene-DKM08_RS13765;Dbxref=GenBank:WP_003414296.1;Name=WP_003414296.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217338.1;locus_tag=DKM08_RS13765;product=type III-A CRISPR-associated protein Csm2;protein_id=WP_003414296.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2754482 2756920 . - . ID=gene-DKM08_RS13770;Name=cas10;gbkey=Gene;gene=cas10;gene_biotype=protein_coding;locus_tag=DKM08_RS13770;old_locus_tag=DKM08_13755 NZ_QFYX01000001.1 Protein Homology CDS 2754482 2756920 . - 0 ID=cds-WP_147020920.1;Parent=gene-DKM08_RS13770;Dbxref=GenBank:WP_147020920.1;Name=WP_147020920.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas10;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217339.1;locus_tag=DKM08_RS13770;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=WP_147020920.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2756917 2757705 . - . ID=gene-DKM08_RS13775;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=DKM08_RS13775;old_locus_tag=DKM08_13760 NZ_QFYX01000001.1 Protein Homology CDS 2756917 2757705 . - 0 ID=cds-WP_003917092.1;Parent=gene-DKM08_RS13775;Dbxref=GenBank:WP_003917092.1;Name=WP_003917092.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917092.1;locus_tag=DKM08_RS13775;product=CRISPR-associated endoribonuclease Cas6;protein_id=WP_003917092.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2758039 2758584 . - . ID=gene-DKM08_RS13780;Name=DKM08_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13780;old_locus_tag=DKM08_13765 NZ_QFYX01000001.1 Protein Homology CDS 2758039 2758584 . - 0 ID=cds-WP_057374336.1;Parent=gene-DKM08_RS13780;Dbxref=GenBank:WP_057374336.1;Name=WP_057374336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=DKM08_RS13780;product=DUF1802 family protein;protein_id=WP_057374336.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2758856 2759740 . - . ID=gene-DKM08_RS13785;Name=DKM08_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13785;old_locus_tag=DKM08_13770 NZ_QFYX01000001.1 Protein Homology CDS 2758856 2759740 . - 0 ID=cds-WP_003414409.1;Parent=gene-DKM08_RS13785;Dbxref=GenBank:WP_003414409.1;Name=WP_003414409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217342.1;locus_tag=DKM08_RS13785;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003414409.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2759743 2760630 . - . ID=gene-DKM08_RS13790;Name=DKM08_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13790;old_locus_tag=DKM08_13775 NZ_QFYX01000001.1 Protein Homology CDS 2759743 2760630 . - 0 ID=cds-WP_003414414.1;Parent=gene-DKM08_RS13790;Dbxref=GenBank:WP_003414414.1;Name=WP_003414414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217343.1;locus_tag=DKM08_RS13790;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003414414.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2760935 2761480 . - . ID=gene-DKM08_RS13795;Name=DKM08_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13795;old_locus_tag=DKM08_13780 NZ_QFYX01000001.1 Protein Homology CDS 2760935 2761480 . - 0 ID=cds-WP_010950781.1;Parent=gene-DKM08_RS13795;Dbxref=GenBank:WP_010950781.1;Name=WP_010950781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=DKM08_RS13795;product=DUF1802 family protein;protein_id=WP_010950781.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2761477 2761746 . - . ID=gene-DKM08_RS13800;Name=DKM08_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13800;old_locus_tag=DKM08_13785 NZ_QFYX01000001.1 Protein Homology CDS 2761477 2761746 . - 0 ID=cds-WP_003414489.1;Parent=gene-DKM08_RS13800;Dbxref=GenBank:WP_003414489.1;Name=WP_003414489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411535.1;locus_tag=DKM08_RS13800;product=DUF2277 domain-containing protein;protein_id=WP_003414489.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2761767 2762159 . - . ID=gene-DKM08_RS13805;Name=DKM08_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13805;old_locus_tag=DKM08_13790 NZ_QFYX01000001.1 Protein Homology CDS 2761767 2762159 . - 0 ID=cds-WP_003414492.1;Parent=gene-DKM08_RS13805;Dbxref=GenBank:WP_003414492.1;Name=WP_003414492.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217345.1;locus_tag=DKM08_RS13805;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414492.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2762156 2762371 . - . ID=gene-DKM08_RS13810;Name=DKM08_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13810;old_locus_tag=DKM08_13795 NZ_QFYX01000001.1 Protein Homology CDS 2762156 2762371 . - 0 ID=cds-WP_003414495.1;Parent=gene-DKM08_RS13810;Dbxref=GenBank:WP_003414495.1;Name=WP_003414495.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217346.1;locus_tag=DKM08_RS13810;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414495.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2762418 2763167 . + . ID=gene-DKM08_RS13815;Name=DKM08_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13815;old_locus_tag=DKM08_13800 NZ_QFYX01000001.1 Protein Homology CDS 2762418 2763167 . + 0 ID=cds-WP_003414497.1;Parent=gene-DKM08_RS13815;Dbxref=GenBank:WP_003414497.1;Name=WP_003414497.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217347.1;locus_tag=DKM08_RS13815;product=enoyl-CoA hydratase;protein_id=WP_003414497.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2763246 2764328 . - . ID=gene-DKM08_RS13820;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=DKM08_RS13820;old_locus_tag=DKM08_13805 NZ_QFYX01000001.1 Protein Homology CDS 2763246 2764328 . - 0 ID=cds-WP_003414499.1;Parent=gene-DKM08_RS13820;Dbxref=GenBank:WP_003414499.1;Name=WP_003414499.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217348.1;locus_tag=DKM08_RS13820;product=ABC transporter ATP-binding protein;protein_id=WP_003414499.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2764321 2765631 . - . ID=gene-DKM08_RS13825;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=DKM08_RS13825;old_locus_tag=DKM08_13810 NZ_QFYX01000001.1 Protein Homology CDS 2764321 2765631 . - 0 ID=cds-WP_023349584.1;Parent=gene-DKM08_RS13825;Dbxref=GenBank:WP_023349584.1;Name=WP_023349584.1;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217349.1;locus_tag=DKM08_RS13825;product=ABC transporter substrate-binding protein;protein_id=WP_023349584.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2765634 2766461 . - . ID=gene-DKM08_RS13830;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=DKM08_RS13830;old_locus_tag=DKM08_13815 NZ_QFYX01000001.1 Protein Homology CDS 2765634 2766461 . - 0 ID=cds-WP_003414504.1;Parent=gene-DKM08_RS13830;Dbxref=GenBank:WP_003414504.1;Name=WP_003414504.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ugpE;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217350.1;locus_tag=DKM08_RS13830;product=carbohydrate ABC transporter permease;protein_id=WP_003414504.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2766458 2767368 . - . ID=gene-DKM08_RS13835;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=pseudogene;locus_tag=DKM08_RS13835;old_locus_tag=DKM08_13820;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2766458 2767368 . - 0 ID=cds-DKM08_RS13835;Parent=gene-DKM08_RS13835;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217351.1;locus_tag=DKM08_RS13835;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2767455 2768774 . - . ID=gene-DKM08_RS13840;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=DKM08_RS13840;old_locus_tag=DKM08_13825 NZ_QFYX01000001.1 Protein Homology CDS 2767455 2768774 . - 0 ID=cds-WP_010950786.1;Parent=gene-DKM08_RS13840;Dbxref=GenBank:WP_010950786.1;Name=WP_010950786.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217352.1;locus_tag=DKM08_RS13840;product=MATE family efflux transporter;protein_id=WP_010950786.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2768781 2769791 . - . ID=gene-DKM08_RS13845;Name=nrnA;gbkey=Gene;gene=nrnA;gene_biotype=protein_coding;locus_tag=DKM08_RS13845;old_locus_tag=DKM08_13830 NZ_QFYX01000001.1 Protein Homology CDS 2768781 2769791 . - 0 ID=cds-WP_003414507.1;Parent=gene-DKM08_RS13845;Dbxref=GenBank:WP_003414507.1;Name=WP_003414507.1;gbkey=CDS;gene=nrnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217353.1;locus_tag=DKM08_RS13845;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_003414507.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2769766 2770317 . - . ID=gene-DKM08_RS13850;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=DKM08_RS13850;old_locus_tag=DKM08_13835 NZ_QFYX01000001.1 Protein Homology CDS 2769766 2770317 . - 0 ID=cds-WP_003414508.1;Parent=gene-DKM08_RS13850;Dbxref=GenBank:WP_003414508.1;Name=WP_003414508.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217354.1;locus_tag=DKM08_RS13850;product=30S ribosome-binding factor RbfA;protein_id=WP_003414508.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2770317 2773019 . - . ID=gene-DKM08_RS13855;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=DKM08_RS13855;old_locus_tag=DKM08_13840 NZ_QFYX01000001.1 Protein Homology CDS 2770317 2773019 . - 0 ID=cds-WP_003899505.1;Parent=gene-DKM08_RS13855;Dbxref=GenBank:WP_003899505.1;Name=WP_003899505.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217355.1;locus_tag=DKM08_RS13855;product=translation initiation factor IF-2;protein_id=WP_003899505.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2773105 2773482 . - . ID=gene-DKM08_RS13860;Name=DKM08_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13860;old_locus_tag=DKM08_13845 NZ_QFYX01000001.1 Protein Homology CDS 2773105 2773482 . - 0 ID=cds-WP_003899506.1;Parent=gene-DKM08_RS13860;Dbxref=GenBank:WP_003899506.1;Name=WP_003899506.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF016204.6;locus_tag=DKM08_RS13860;product=YlxR family protein;protein_id=WP_003899506.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2773531 2774574 . - . ID=gene-DKM08_RS13865;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=DKM08_RS13865;old_locus_tag=DKM08_13850 NZ_QFYX01000001.1 Protein Homology CDS 2773531 2774574 . - 0 ID=cds-WP_003414511.1;Parent=gene-DKM08_RS13865;Dbxref=GenBank:WP_003414511.1;Name=WP_003414511.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217357.1;locus_tag=DKM08_RS13865;product=transcription termination factor NusA;protein_id=WP_003414511.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2774571 2775122 . - . ID=gene-DKM08_RS13870;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=DKM08_RS13870;old_locus_tag=DKM08_13855 NZ_QFYX01000001.1 Protein Homology CDS 2774571 2775122 . - 0 ID=cds-WP_003899507.1;Parent=gene-DKM08_RS13870;Dbxref=GenBank:WP_003899507.1;Name=WP_003899507.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217358.1;locus_tag=DKM08_RS13870;product=ribosome maturation factor RimP;protein_id=WP_003899507.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2775317 2775862 . + . ID=gene-DKM08_RS13875;Name=DKM08_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13875;old_locus_tag=DKM08_13860 NZ_QFYX01000001.1 Protein Homology CDS 2775317 2775862 . + 0 ID=cds-WP_003414516.1;Parent=gene-DKM08_RS13875;Dbxref=GenBank:WP_003414516.1;Name=WP_003414516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217359.1;locus_tag=DKM08_RS13875;product=hypothetical protein;protein_id=WP_003414516.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2775859 2776347 . + . ID=gene-DKM08_RS13880;Name=DKM08_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13880;old_locus_tag=DKM08_13865 NZ_QFYX01000001.1 Protein Homology CDS 2775859 2776347 . + 0 ID=cds-WP_003414522.1;Parent=gene-DKM08_RS13880;Dbxref=GenBank:WP_003414522.1;Name=WP_003414522.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217360.1;locus_tag=DKM08_RS13880;product=ferritin-like domain-containing protein;protein_id=WP_003414522.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2776348 2778096 . - . ID=gene-DKM08_RS13885;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=DKM08_RS13885;old_locus_tag=DKM08_13870 NZ_QFYX01000001.1 Protein Homology CDS 2776348 2778096 . - 0 ID=cds-WP_010950787.1;Parent=gene-DKM08_RS13885;Dbxref=GenBank:WP_010950787.1;Name=WP_010950787.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;gene=proS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217361.1;locus_tag=DKM08_RS13885;product=proline--tRNA ligase;protein_id=WP_010950787.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2778185 2779777 . - . ID=gene-DKM08_RS13890;Name=efpA;gbkey=Gene;gene=efpA;gene_biotype=protein_coding;locus_tag=DKM08_RS13890;old_locus_tag=DKM08_13875 NZ_QFYX01000001.1 Protein Homology CDS 2778185 2779777 . - 0 ID=cds-WP_010950788.1;Parent=gene-DKM08_RS13890;Dbxref=GenBank:WP_010950788.1;Name=WP_010950788.1;gbkey=CDS;gene=efpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217362.1;locus_tag=DKM08_RS13890;product=multidrug efflux MFS transporter EfpA;protein_id=WP_010950788.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2779800 2781017 . - . ID=gene-DKM08_RS13895;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=DKM08_RS13895;old_locus_tag=DKM08_13880 NZ_QFYX01000001.1 Protein Homology CDS 2779800 2781017 . - 0 ID=cds-WP_003414535.1;Parent=gene-DKM08_RS13895;Dbxref=GenBank:WP_003414535.1;Name=WP_003414535.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215025.2;locus_tag=DKM08_RS13895;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_003414535.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2781240 2782613 . - . ID=gene-DKM08_RS13900;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=DKM08_RS13900;old_locus_tag=DKM08_13885 NZ_QFYX01000001.1 Protein Homology CDS 2781240 2782613 . - 0 ID=cds-WP_031355564.1;Parent=gene-DKM08_RS13900;Dbxref=GenBank:WP_031355564.1;Name=WP_031355564.1;Ontology_term=GO:0042242;gbkey=CDS;gene=cobB;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217364.1;locus_tag=DKM08_RS13900;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_031355564.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2782613 2783236 . - . ID=gene-DKM08_RS13905;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=DKM08_RS13905;old_locus_tag=DKM08_13890 NZ_QFYX01000001.1 Protein Homology CDS 2782613 2783236 . - 0 ID=cds-WP_010950789.1;Parent=gene-DKM08_RS13905;Dbxref=GenBank:WP_010950789.1;Name=WP_010950789.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177908.1;locus_tag=DKM08_RS13905;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_010950789.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2783257 2785146 . - . ID=gene-DKM08_RS13910;Name=DKM08_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13910;old_locus_tag=DKM08_13895 NZ_QFYX01000001.1 Protein Homology CDS 2783257 2785146 . - 0 ID=cds-WP_023349585.1;Parent=gene-DKM08_RS13910;Dbxref=GenBank:WP_023349585.1;Name=WP_023349585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217366.1;locus_tag=DKM08_RS13910;product=magnesium chelatase subunit D family protein;protein_id=WP_023349585.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2785143 2785613 . - . ID=gene-DKM08_RS13915;Name=DKM08_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13915;old_locus_tag=DKM08_13900 NZ_QFYX01000001.1 Protein Homology CDS 2785143 2785613 . - 0 ID=cds-WP_003414543.1;Parent=gene-DKM08_RS13915;Dbxref=GenBank:WP_003414543.1;Name=WP_003414543.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217367.1;locus_tag=DKM08_RS13915;product=GNAT family N-acetyltransferase;protein_id=WP_003414543.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2785672 2787153 . - . ID=gene-DKM08_RS13920;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=DKM08_RS13920;old_locus_tag=DKM08_13905 NZ_QFYX01000001.1 Protein Homology CDS 2785672 2787153 . - 0 ID=cds-WP_003414545.1;Parent=gene-DKM08_RS13920;Dbxref=GenBank:WP_003414545.1;Name=WP_003414545.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217368.1;locus_tag=DKM08_RS13920;product=malate dehydrogenase (quinone);protein_id=WP_003414545.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2787360 2789207 . + . ID=gene-DKM08_RS13925;Name=DKM08_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13925;old_locus_tag=DKM08_13910 NZ_QFYX01000001.1 Protein Homology CDS 2787360 2789207 . + 0 ID=cds-WP_147020917.1;Parent=gene-DKM08_RS13925;Dbxref=GenBank:WP_147020917.1;Name=WP_147020917.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177909.1;locus_tag=DKM08_RS13925;product=PE family protein;protein_id=WP_147020917.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2789244 2790284 . + . ID=gene-DKM08_RS13930;Name=DKM08_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13930;old_locus_tag=DKM08_13915 NZ_QFYX01000001.1 Protein Homology CDS 2789244 2790284 . + 0 ID=cds-WP_003414553.1;Parent=gene-DKM08_RS13930;Dbxref=GenBank:WP_003414553.1;Name=WP_003414553.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217370.1;locus_tag=DKM08_RS13930;product=alpha/beta hydrolase;protein_id=WP_003414553.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2790297 2791676 . + . ID=gene-DKM08_RS13935;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=DKM08_RS13935;old_locus_tag=DKM08_13920 NZ_QFYX01000001.1 Protein Homology CDS 2790297 2791676 . + 0 ID=cds-WP_003414557.1;Parent=gene-DKM08_RS13935;Dbxref=GenBank:WP_003414557.1;Name=WP_003414557.1;Ontology_term=GO:0010126,GO:0050627,GO:0070402;gbkey=CDS;gene=mtr;go_function=mycothione reductase [NAD(P)H] activity|0050627||IEA,NADPH binding|0070402||IEA;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177910.1;locus_tag=DKM08_RS13935;product=mycothione reductase;protein_id=WP_003414557.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2791776 2792894 . + . ID=gene-DKM08_RS13940;Name=nicT;gbkey=Gene;gene=nicT;gene_biotype=protein_coding;locus_tag=DKM08_RS13940;old_locus_tag=DKM08_13925 NZ_QFYX01000001.1 Protein Homology CDS 2791776 2792894 . + 0 ID=cds-WP_003414559.1;Parent=gene-DKM08_RS13940;Dbxref=GenBank:WP_003414559.1;Name=WP_003414559.1;gbkey=CDS;gene=nicT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217372.1;locus_tag=DKM08_RS13940;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_003414559.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2792960 2793292 . + . ID=gene-DKM08_RS22430;Name=DKM08_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22430;old_locus_tag=DKM08_13930 NZ_QFYX01000001.1 Protein Homology CDS 2792960 2793292 . + 0 ID=cds-WP_003414562.1;Parent=gene-DKM08_RS22430;Dbxref=GenBank:WP_003414562.1;Name=WP_003414562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414562.1;locus_tag=DKM08_RS22430;product=GTP-binding protein;protein_id=WP_003414562.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2793304 2793519 . + . ID=gene-DKM08_RS22435;Name=DKM08_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22435;old_locus_tag=DKM08_13935 NZ_QFYX01000001.1 Protein Homology CDS 2793304 2793519 . + 0 ID=cds-WP_003414566.1;Parent=gene-DKM08_RS22435;Dbxref=GenBank:WP_003414566.1;Name=WP_003414566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414566.1;locus_tag=DKM08_RS22435;product=GTP-binding protein;protein_id=WP_003414566.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2793675 2794451 . - . ID=gene-DKM08_RS13960;Name=DKM08_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13960;old_locus_tag=DKM08_13945 NZ_QFYX01000001.1 Protein Homology CDS 2793675 2794451 . - 0 ID=cds-WP_003414570.1;Parent=gene-DKM08_RS13960;Dbxref=GenBank:WP_003414570.1;Name=WP_003414570.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217373.1;locus_tag=DKM08_RS13960;product=3-oxoacyl-ACP reductase;protein_id=WP_003414570.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2794448 2795815 . - . ID=gene-DKM08_RS13965;Name=aldC;gbkey=Gene;gene=aldC;gene_biotype=protein_coding;locus_tag=DKM08_RS13965;old_locus_tag=DKM08_13950 NZ_QFYX01000001.1 Protein Homology CDS 2794448 2795815 . - 0 ID=cds-WP_003900585.1;Parent=gene-DKM08_RS13965;Dbxref=GenBank:WP_003900585.1;Name=WP_003900585.1;Ontology_term=GO:0004030;gbkey=CDS;gene=aldC;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988958.1;locus_tag=DKM08_RS13965;product=aldehyde dehydrogenase family protein;protein_id=WP_003900585.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2795812 2796699 . - . ID=gene-DKM08_RS13970;Name=DKM08_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13970;old_locus_tag=DKM08_13955 NZ_QFYX01000001.1 Protein Homology CDS 2795812 2796699 . - 0 ID=cds-WP_073128469.1;Parent=gene-DKM08_RS13970;Dbxref=GenBank:WP_073128469.1;Name=WP_073128469.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901484.1;locus_tag=DKM08_RS13970;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_073128469.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2796665 2798038 . - . ID=gene-DKM08_RS13975;Name=DKM08_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13975;old_locus_tag=DKM08_13960 NZ_QFYX01000001.1 Protein Homology CDS 2796665 2798038 . - 0 ID=cds-WP_003414579.1;Parent=gene-DKM08_RS13975;Dbxref=GenBank:WP_003414579.1;Name=WP_003414579.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217376.1;locus_tag=DKM08_RS13975;product=glutamine synthetase family protein;protein_id=WP_003414579.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2798198 2799055 . - . ID=gene-DKM08_RS13980;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=DKM08_RS13980;old_locus_tag=DKM08_13965 NZ_QFYX01000001.1 Protein Homology CDS 2798198 2799055 . - 0 ID=cds-WP_003899513.1;Parent=gene-DKM08_RS13980;Dbxref=GenBank:WP_003899513.1;Name=WP_003899513.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177911.1;locus_tag=DKM08_RS13980;product=type I methionyl aminopeptidase;protein_id=WP_003899513.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2799097 2799681 . - . ID=gene-DKM08_RS13985;Name=DKM08_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13985;old_locus_tag=DKM08_13970 NZ_QFYX01000001.1 Protein Homology CDS 2799097 2799681 . - 0 ID=cds-WP_010950792.1;Parent=gene-DKM08_RS13985;Dbxref=GenBank:WP_010950792.1;Name=WP_010950792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217378.1;locus_tag=DKM08_RS13985;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_010950792.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2799785 2800033 . + . ID=gene-DKM08_RS13990;Name=DKM08_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13990;old_locus_tag=DKM08_13975 NZ_QFYX01000001.1 Protein Homology CDS 2799785 2800033 . + 0 ID=cds-WP_003913411.1;Parent=gene-DKM08_RS13990;Dbxref=GenBank:WP_003913411.1;Name=WP_003913411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411570.1;locus_tag=DKM08_RS13990;product=antitoxin VapB23;protein_id=WP_003913411.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2800030 2800410 . + . ID=gene-DKM08_RS13995;Name=DKM08_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS13995;old_locus_tag=DKM08_13980 NZ_QFYX01000001.1 Protein Homology CDS 2800030 2800410 . + 0 ID=cds-WP_003414592.1;Parent=gene-DKM08_RS13995;Dbxref=GenBank:WP_003414592.1;Name=WP_003414592.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217379.1;locus_tag=DKM08_RS13995;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414592.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2800492 2802303 . - . ID=gene-DKM08_RS14000;Name=DKM08_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14000;old_locus_tag=DKM08_13985 NZ_QFYX01000001.1 Protein Homology CDS 2800492 2802303 . - 0 ID=cds-WP_003414596.1;Parent=gene-DKM08_RS14000;Dbxref=GenBank:WP_003414596.1;Name=WP_003414596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217380.1;locus_tag=DKM08_RS14000;product=penicillin-binding protein;protein_id=WP_003414596.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2802575 2802856 . + . ID=gene-DKM08_RS14005;Name=relF;gbkey=Gene;gene=relF;gene_biotype=protein_coding;locus_tag=DKM08_RS14005;old_locus_tag=DKM08_13990 NZ_QFYX01000001.1 Protein Homology CDS 2802575 2802856 . + 0 ID=cds-WP_003414599.1;Parent=gene-DKM08_RS14005;Dbxref=GenBank:WP_003414599.1;Name=WP_003414599.1;gbkey=CDS;gene=relF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217381.1;locus_tag=DKM08_RS14005;product=type II toxin-antitoxin system antitoxin RelF;protein_id=WP_003414599.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2802860 2803123 . + . ID=gene-DKM08_RS14010;Name=relG;gbkey=Gene;gene=relG;gene_biotype=protein_coding;locus_tag=DKM08_RS14010;old_locus_tag=DKM08_13995 NZ_QFYX01000001.1 Protein Homology CDS 2802860 2803123 . + 0 ID=cds-WP_003414602.1;Parent=gene-DKM08_RS14010;Dbxref=GenBank:WP_003414602.1;Name=WP_003414602.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;gene=relG;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217382.1;locus_tag=DKM08_RS14010;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003414602.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2803496 2804350 . - . ID=gene-DKM08_RS14015;Name=DKM08_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14015;old_locus_tag=DKM08_14000 NZ_QFYX01000001.1 Protein Homology CDS 2803496 2804350 . - 0 ID=cds-WP_003899516.1;Parent=gene-DKM08_RS14015;Dbxref=GenBank:WP_003899516.1;Name=WP_003899516.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217383.1;locus_tag=DKM08_RS14015;product=GNAT family N-acetyltransferase;protein_id=WP_003899516.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2804406 2805569 . - . ID=gene-DKM08_RS14020;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=DKM08_RS14020;old_locus_tag=DKM08_14005 NZ_QFYX01000001.1 Protein Homology CDS 2804406 2805569 . - 0 ID=cds-WP_003899517.1;Parent=gene-DKM08_RS14020;Dbxref=GenBank:WP_003899517.1;Name=WP_003899517.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217384.1;locus_tag=DKM08_RS14020;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_003899517.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2805586 2806800 . - . ID=gene-DKM08_RS14025;Name=rip;gbkey=Gene;gene=rip;gene_biotype=protein_coding;locus_tag=DKM08_RS14025;old_locus_tag=DKM08_14010 NZ_QFYX01000001.1 Protein Homology CDS 2805586 2806800 . - 0 ID=cds-WP_003414610.1;Parent=gene-DKM08_RS14025;Dbxref=GenBank:WP_003414610.1;Name=WP_003414610.1;gbkey=CDS;gene=rip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217385.1;locus_tag=DKM08_RS14025;product=zinc metalloprotease Rip;protein_id=WP_003414610.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2806808 2808049 . - . ID=gene-DKM08_RS14030;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=DKM08_RS14030;old_locus_tag=DKM08_14015 NZ_QFYX01000001.1 Protein Homology CDS 2806808 2808049 . - 0 ID=cds-WP_003414613.1;Parent=gene-DKM08_RS14030;Dbxref=GenBank:WP_003414613.1;Name=WP_003414613.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217386.2;locus_tag=DKM08_RS14030;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_003414613.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2808176 2808433 . + . ID=gene-DKM08_RS14035;Name=DKM08_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14035;old_locus_tag=DKM08_14020 NZ_QFYX01000001.1 Protein Homology CDS 2808176 2808433 . + 0 ID=cds-WP_003414620.1;Parent=gene-DKM08_RS14035;Dbxref=GenBank:WP_003414620.1;Name=WP_003414620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217387.1;locus_tag=DKM08_RS14035;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003414620.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2808420 2808863 . + . ID=gene-DKM08_RS14040;Name=DKM08_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14040;old_locus_tag=DKM08_14025 NZ_QFYX01000001.1 Protein Homology CDS 2808420 2808863 . + 0 ID=cds-WP_003414624.1;Parent=gene-DKM08_RS14040;Dbxref=GenBank:WP_003414624.1;Name=WP_003414624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217388.1;locus_tag=DKM08_RS14040;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414624.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2808943 2809605 . + . ID=gene-DKM08_RS14045;Name=mpt83;gbkey=Gene;gene=mpt83;gene_biotype=protein_coding;locus_tag=DKM08_RS14045;old_locus_tag=DKM08_14030 NZ_QFYX01000001.1 Protein Homology CDS 2808943 2809605 . + 0 ID=cds-WP_003414630.1;Parent=gene-DKM08_RS14045;Dbxref=GenBank:WP_003414630.1;Name=WP_003414630.1;gbkey=CDS;gene=mpt83;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217389.1;locus_tag=DKM08_RS14045;product=cell surface glycolipoprotein Mpt83;protein_id=WP_003414630.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2809701 2809892 . + . ID=gene-DKM08_RS14050;Name=DKM08_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14050;old_locus_tag=DKM08_14035 NZ_QFYX01000001.1 Protein Homology CDS 2809701 2809892 . + 0 ID=cds-WP_023349587.1;Parent=gene-DKM08_RS14050;Dbxref=GenBank:WP_023349587.1;Name=WP_023349587.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630591.1;locus_tag=DKM08_RS14050;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_023349587.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2810224 2811972 . + . ID=gene-DKM08_RS14055;Name=DKM08_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14055;old_locus_tag=DKM08_14040 NZ_QFYX01000001.1 Protein Homology CDS 2810224 2811972 . + 0 ID=cds-WP_003912869.1;Parent=gene-DKM08_RS14055;Dbxref=GenBank:WP_003912869.1;Name=WP_003912869.1;Ontology_term=GO:0017004,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303615.1;locus_tag=DKM08_RS14055;product=cytochrome c biogenesis protein DipZ;protein_id=WP_003912869.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2812068 2812649 . + . ID=gene-DKM08_RS14060;Name=DKM08_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14060;old_locus_tag=DKM08_14045 NZ_QFYX01000001.1 Protein Homology CDS 2812068 2812649 . + 0 ID=cds-WP_003414644.1;Parent=gene-DKM08_RS14060;Dbxref=GenBank:WP_003414644.1;Name=WP_003414644.1;Ontology_term=GO:0007155;gbkey=CDS;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217391.1;locus_tag=DKM08_RS14060;product=fasciclin domain-containing protein;protein_id=WP_003414644.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2812749 2813015 . + . ID=gene-DKM08_RS14065;Name=DKM08_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14065;old_locus_tag=DKM08_14050 NZ_QFYX01000001.1 Protein Homology CDS 2812749 2813015 . + 0 ID=cds-WP_031652375.1;Parent=gene-DKM08_RS14065;Dbxref=GenBank:WP_031652375.1;Name=WP_031652375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908416.1;locus_tag=DKM08_RS14065;product=DUF2631 domain-containing protein;protein_id=WP_031652375.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2813046 2813909 . - . ID=gene-DKM08_RS14070;Name=DKM08_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14070;old_locus_tag=DKM08_14055 NZ_QFYX01000001.1 Protein Homology CDS 2813046 2813909 . - 0 ID=cds-WP_003904947.1;Parent=gene-DKM08_RS14070;Dbxref=GenBank:WP_003904947.1;Name=WP_003904947.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177912.1;locus_tag=DKM08_RS14070;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003904947.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2813914 2814435 . - . ID=gene-DKM08_RS14075;Name=DKM08_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14075;old_locus_tag=DKM08_14060 NZ_QFYX01000001.1 Protein Homology CDS 2813914 2814435 . - 0 ID=cds-WP_003414654.1;Parent=gene-DKM08_RS14075;Dbxref=GenBank:WP_003414654.1;Name=WP_003414654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217394.1;locus_tag=DKM08_RS14075;product=protein disulfide oxidoreductase;protein_id=WP_003414654.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2814621 2815715 . - . ID=gene-DKM08_RS14080;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=DKM08_RS14080;old_locus_tag=DKM08_14065 NZ_QFYX01000001.1 Protein Homology CDS 2814621 2815715 . - 0 ID=cds-WP_003414658.1;Parent=gene-DKM08_RS14080;Dbxref=GenBank:WP_003414658.1;Name=WP_003414658.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875108.1;locus_tag=DKM08_RS14080;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_003414658.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2815738 2816658 . - . ID=gene-DKM08_RS14085;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=DKM08_RS14085;old_locus_tag=DKM08_14070 NZ_QFYX01000001.1 Protein Homology CDS 2815738 2816658 . - 0 ID=cds-WP_003414661.1;Parent=gene-DKM08_RS14085;Dbxref=GenBank:WP_003414661.1;Name=WP_003414661.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=cdsA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217397.1;locus_tag=DKM08_RS14085;product=phosphatidate cytidylyltransferase;protein_id=WP_003414661.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2816681 2817238 . - . ID=gene-DKM08_RS14090;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=DKM08_RS14090;old_locus_tag=DKM08_14075 NZ_QFYX01000001.1 Protein Homology CDS 2816681 2817238 . - 0 ID=cds-WP_003414663.1;Parent=gene-DKM08_RS14090;Dbxref=GenBank:WP_003414663.1;Name=WP_003414663.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217398.1;locus_tag=DKM08_RS14090;product=ribosome recycling factor;protein_id=WP_003414663.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2817305 2817378 . - . ID=gene-DKM08_RS22775;Name=DKM08_RS22775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22775;partial=true;pseudo=true;start_range=.,2817305 NZ_QFYX01000001.1 Protein Homology CDS 2817305 2817378 . - 0 ID=cds-DKM08_RS22775;Parent=gene-DKM08_RS22775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=DKM08_RS22775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2817305;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2817410 2818195 . - . ID=gene-DKM08_RS14100;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=DKM08_RS14100;old_locus_tag=DKM08_14085 NZ_QFYX01000001.1 Protein Homology CDS 2817410 2818195 . - 0 ID=cds-WP_003414665.1;Parent=gene-DKM08_RS14100;Dbxref=GenBank:WP_003414665.1;Name=WP_003414665.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217399.1;locus_tag=DKM08_RS14100;product=UMP kinase;protein_id=WP_003414665.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2818430 2819188 . + . ID=gene-DKM08_RS14105;Name=DKM08_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14105;old_locus_tag=DKM08_14090 NZ_QFYX01000001.1 Protein Homology CDS 2818430 2819188 . + 0 ID=cds-WP_003414666.1;Parent=gene-DKM08_RS14105;Dbxref=GenBank:WP_003414666.1;Name=WP_003414666.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917701.1;locus_tag=DKM08_RS14105;product=winged helix-turn-helix domain-containing protein;protein_id=WP_003414666.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2819203 2820583 . - . ID=gene-DKM08_RS14110;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=DKM08_RS14110;old_locus_tag=DKM08_14095;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2819203 2820583 . - 0 ID=cds-DKM08_RS14110;Parent=gene-DKM08_RS14110;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351709.1;locus_tag=DKM08_RS14110;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2820583 2821170 . - . ID=gene-DKM08_RS14115;Name=DKM08_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14115;old_locus_tag=DKM08_14100 NZ_QFYX01000001.1 Protein Homology CDS 2820583 2821170 . - 0 ID=cds-WP_003414668.1;Parent=gene-DKM08_RS14115;Dbxref=GenBank:WP_003414668.1;Name=WP_003414668.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414668.1;locus_tag=DKM08_RS14115;product=IS607-like element IS1539 family transposase;protein_id=WP_003414668.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2821469 2821888 . + . ID=gene-DKM08_RS14120;Name=DKM08_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14120;old_locus_tag=DKM08_14105 NZ_QFYX01000001.1 Protein Homology CDS 2821469 2821888 . + 0 ID=cds-WP_003899525.1;Parent=gene-DKM08_RS14120;Dbxref=GenBank:WP_003899525.1;Name=WP_003899525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217403.1;locus_tag=DKM08_RS14120;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003899525.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2821902 2823323 . - . ID=gene-DKM08_RS14125;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=DKM08_RS14125;old_locus_tag=DKM08_14110 NZ_QFYX01000001.1 Protein Homology CDS 2821902 2823323 . - 0 ID=cds-WP_003414672.1;Parent=gene-DKM08_RS14125;Dbxref=GenBank:WP_003414672.1;Name=WP_003414672.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217404.1;locus_tag=DKM08_RS14125;product=amidase;protein_id=WP_003414672.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2823330 2824145 . - . ID=gene-DKM08_RS14130;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=DKM08_RS14130;old_locus_tag=DKM08_14115 NZ_QFYX01000001.1 Protein Homology CDS 2823330 2824145 . - 0 ID=cds-WP_010950794.1;Parent=gene-DKM08_RS14130;Dbxref=GenBank:WP_010950794.1;Name=WP_010950794.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217405.1;locus_tag=DKM08_RS14130;product=translation elongation factor Ts;protein_id=WP_010950794.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2824157 2825020 . - . ID=gene-DKM08_RS14135;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=DKM08_RS14135;old_locus_tag=DKM08_14120 NZ_QFYX01000001.1 Protein Homology CDS 2824157 2825020 . - 0 ID=cds-WP_003899528.1;Parent=gene-DKM08_RS14135;Dbxref=GenBank:WP_003899528.1;Name=WP_003899528.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217406.1;locus_tag=DKM08_RS14135;product=30S ribosomal protein S2;protein_id=WP_003899528.1;transl_table=11 NZ_QFYX01000001.1 RefSeq pseudogene 2825340 2825699 . + . ID=gene-DKM08_RS21680;Name=DKM08_RS21680;end_range=2825699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21680;partial=true;pseudo=true NZ_QFYX01000001.1 Protein Homology CDS 2825340 2825699 . + 0 ID=cds-DKM08_RS21680;Parent=gene-DKM08_RS21680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008237,GO:0046872;end_range=2825699,.;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.6;locus_tag=DKM08_RS21680;partial=true;product=M23 family metallopeptidase;pseudo=true;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2825832 2827058 . - . ID=gene-DKM08_RS14145;Name=DKM08_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14145;old_locus_tag=DKM08_14130 NZ_QFYX01000001.1 Protein Homology CDS 2825832 2827058 . - 0 ID=cds-WP_003414680.1;Parent=gene-DKM08_RS14145;Dbxref=GenBank:WP_003414680.1;Name=WP_003414680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177913.1;locus_tag=DKM08_RS14145;product=PPE family protein;protein_id=WP_003414680.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2827458 2828435 . + . ID=gene-DKM08_RS14150;Name=DKM08_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14150;old_locus_tag=DKM08_14135 NZ_QFYX01000001.1 Protein Homology CDS 2827458 2828435 . + 0 ID=cds-WP_003414686.1;Parent=gene-DKM08_RS14150;Dbxref=GenBank:WP_003414686.1;Name=WP_003414686.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217409.1;locus_tag=DKM08_RS14150;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003414686.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2828432 2829328 . - . ID=gene-DKM08_RS14155;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=DKM08_RS14155;old_locus_tag=DKM08_14140 NZ_QFYX01000001.1 Protein Homology CDS 2828432 2829328 . - 0 ID=cds-WP_003414689.1;Parent=gene-DKM08_RS14155;Dbxref=GenBank:WP_003414689.1;Name=WP_003414689.1;Ontology_term=GO:0006313,GO:0007059,GO:0051301,GO:0003677,GO:0009037;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA,tyrosine-based site-specific recombinase activity|0009037||IEA;go_process=DNA transposition|0006313||IEA,chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217410.1;locus_tag=DKM08_RS14155;product=tyrosine recombinase XerC;protein_id=WP_003414689.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2829419 2830270 . - . ID=gene-DKM08_RS14160;Name=viuB;gbkey=Gene;gene=viuB;gene_biotype=protein_coding;locus_tag=DKM08_RS14160;old_locus_tag=DKM08_14145 NZ_QFYX01000001.1 Protein Homology CDS 2829419 2830270 . - 0 ID=cds-WP_003900590.1;Parent=gene-DKM08_RS14160;Dbxref=GenBank:WP_003900590.1;Name=WP_003900590.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;gene=viuB;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217411.1;locus_tag=DKM08_RS14160;product=siderophore-interacting protein;protein_id=WP_003900590.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2830303 2831472 . - . ID=gene-DKM08_RS14165;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=DKM08_RS14165;old_locus_tag=DKM08_14150 NZ_QFYX01000001.1 Protein Homology CDS 2830303 2831472 . - 0 ID=cds-WP_010950795.1;Parent=gene-DKM08_RS14165;Dbxref=GenBank:WP_010950795.1;Name=WP_010950795.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217412.2;locus_tag=DKM08_RS14165;product=DNA-processing protein DprA;protein_id=WP_010950795.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2831469 2832980 . - . ID=gene-DKM08_RS14170;Name=DKM08_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14170;old_locus_tag=DKM08_14155 NZ_QFYX01000001.1 Protein Homology CDS 2831469 2832980 . - 0 ID=cds-WP_003414700.1;Parent=gene-DKM08_RS14170;Dbxref=GenBank:WP_003414700.1;Name=WP_003414700.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217413.1;locus_tag=DKM08_RS14170;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_003414700.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2832980 2833366 . - . ID=gene-DKM08_RS14175;Name=DKM08_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14175;old_locus_tag=DKM08_14160 NZ_QFYX01000001.1 Protein Homology CDS 2832980 2833366 . - 0 ID=cds-WP_003414702.1;Parent=gene-DKM08_RS14175;Dbxref=GenBank:WP_003414702.1;Name=WP_003414702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217414.1;locus_tag=DKM08_RS14175;product=YraN family protein;protein_id=WP_003414702.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2833614 2834444 . - . ID=gene-DKM08_RS14180;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=DKM08_RS14180;old_locus_tag=DKM08_14165 NZ_QFYX01000001.1 Protein Homology CDS 2833614 2834444 . - 0 ID=cds-WP_003414705.1;Parent=gene-DKM08_RS14180;Dbxref=GenBank:WP_003414705.1;Name=WP_003414705.1;Ontology_term=GO:0016783;gbkey=CDS;gene=fdhD;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217415.1;locus_tag=DKM08_RS14180;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_003414705.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2834444 2836783 . - . ID=gene-DKM08_RS14185;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=DKM08_RS14185;old_locus_tag=DKM08_14170 NZ_QFYX01000001.1 Protein Homology CDS 2834444 2836783 . - 0 ID=cds-WP_003899532.1;Parent=gene-DKM08_RS14185;Dbxref=GenBank:WP_003899532.1;Name=WP_003899532.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;gene=fdhF;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217416.1;locus_tag=DKM08_RS14185;product=FdhF/YdeP family oxidoreductase;protein_id=WP_003899532.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2836841 2837146 . - . ID=gene-DKM08_RS14190;Name=DKM08_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14190;old_locus_tag=DKM08_14175 NZ_QFYX01000001.1 Protein Homology CDS 2836841 2837146 . - 0 ID=cds-WP_003414710.1;Parent=gene-DKM08_RS14190;Dbxref=GenBank:WP_003414710.1;Name=WP_003414710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217417.1;locus_tag=DKM08_RS14190;product=DUF2469 domain-containing protein;protein_id=WP_003414710.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2837200 2837994 . - . ID=gene-DKM08_RS14195;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=DKM08_RS14195;old_locus_tag=DKM08_14180 NZ_QFYX01000001.1 Protein Homology CDS 2837200 2837994 . - 0 ID=cds-WP_023349588.1;Parent=gene-DKM08_RS14195;Dbxref=GenBank:WP_023349588.1;Name=WP_023349588.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217418.1;locus_tag=DKM08_RS14195;product=ribonuclease HII;protein_id=WP_023349588.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2838008 2838892 . - . ID=gene-DKM08_RS14200;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=DKM08_RS14200;old_locus_tag=DKM08_14185 NZ_QFYX01000001.1 Protein Homology CDS 2838008 2838892 . - 0 ID=cds-WP_010950797.1;Parent=gene-DKM08_RS14200;Dbxref=GenBank:WP_010950797.1;Name=WP_010950797.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217419.1;locus_tag=DKM08_RS14200;product=signal peptidase I;protein_id=WP_010950797.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2838950 2839291 . - . ID=gene-DKM08_RS14205;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=DKM08_RS14205;old_locus_tag=DKM08_14190 NZ_QFYX01000001.1 Protein Homology CDS 2838950 2839291 . - 0 ID=cds-WP_003414717.1;Parent=gene-DKM08_RS14205;Dbxref=GenBank:WP_003414717.1;Name=WP_003414717.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217420.1;locus_tag=DKM08_RS14205;product=50S ribosomal protein L19;protein_id=WP_003414717.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2839666 2840610 . + . ID=gene-DKM08_RS14210;Name=DKM08_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14210;old_locus_tag=DKM08_14195 NZ_QFYX01000001.1 Protein Homology CDS 2839666 2840610 . + 0 ID=cds-WP_003414720.1;Parent=gene-DKM08_RS14210;Dbxref=GenBank:WP_003414720.1;Name=WP_003414720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217421.1;locus_tag=DKM08_RS14210;product=hypothetical protein;protein_id=WP_003414720.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2840703 2841395 . - . ID=gene-DKM08_RS14215;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=DKM08_RS14215;old_locus_tag=DKM08_14200 NZ_QFYX01000001.1 Protein Homology CDS 2840703 2841395 . - 0 ID=cds-WP_003414722.1;Parent=gene-DKM08_RS14215;Dbxref=GenBank:WP_003414722.1;Name=WP_003414722.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217422.1;locus_tag=DKM08_RS14215;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_003414722.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2841399 2841929 . - . ID=gene-DKM08_RS14220;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=DKM08_RS14220;old_locus_tag=DKM08_14205 NZ_QFYX01000001.1 Protein Homology CDS 2841399 2841929 . - 0 ID=cds-WP_003414726.1;Parent=gene-DKM08_RS14220;Dbxref=GenBank:WP_003414726.1;Name=WP_003414726.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217423.1;locus_tag=DKM08_RS14220;product=ribosome maturation factor RimM;protein_id=WP_003414726.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2841943 2842185 . - . ID=gene-DKM08_RS14225;Name=DKM08_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14225;old_locus_tag=DKM08_14210 NZ_QFYX01000001.1 Protein Homology CDS 2841943 2842185 . - 0 ID=cds-WP_003414728.1;Parent=gene-DKM08_RS14225;Dbxref=GenBank:WP_003414728.1;Name=WP_003414728.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217424.1;locus_tag=DKM08_RS14225;product=RNA-binding protein;protein_id=WP_003414728.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2842193 2842681 . - . ID=gene-DKM08_RS14230;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=DKM08_RS14230;old_locus_tag=DKM08_14215 NZ_QFYX01000001.1 Protein Homology CDS 2842193 2842681 . - 0 ID=cds-WP_003414731.1;Parent=gene-DKM08_RS14230;Dbxref=GenBank:WP_003414731.1;Name=WP_003414731.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsP;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217425.1;locus_tag=DKM08_RS14230;product=30S ribosomal protein S16;protein_id=WP_003414731.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2842865 2843284 . - . ID=gene-DKM08_RS14235;Name=DKM08_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14235;old_locus_tag=DKM08_14220 NZ_QFYX01000001.1 Protein Homology CDS 2842865 2843284 . - 0 ID=cds-WP_003912031.1;Parent=gene-DKM08_RS14235;Dbxref=GenBank:WP_003912031.1;Name=WP_003912031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875068.1;locus_tag=DKM08_RS14235;product=nuclear transport factor 2 family protein;protein_id=WP_003912031.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2843377 2844252 . + . ID=gene-DKM08_RS14240;Name=dacB2;gbkey=Gene;gene=dacB2;gene_biotype=protein_coding;locus_tag=DKM08_RS14240;old_locus_tag=DKM08_14225 NZ_QFYX01000001.1 Protein Homology CDS 2843377 2844252 . + 0 ID=cds-WP_003414736.1;Parent=gene-DKM08_RS14240;Dbxref=GenBank:WP_003414736.1;Name=WP_003414736.1;gbkey=CDS;gene=dacB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177914.1;locus_tag=DKM08_RS14240;product=D-alanyl-D-alanine carboxypeptidase DacB2;protein_id=WP_003414736.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2844312 2844899 . - . ID=gene-DKM08_RS14245;Name=DKM08_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14245;old_locus_tag=DKM08_14230 NZ_QFYX01000001.1 Protein Homology CDS 2844312 2844899 . - 0 ID=cds-WP_003414739.1;Parent=gene-DKM08_RS14245;Dbxref=GenBank:WP_003414739.1;Name=WP_003414739.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217428.1;locus_tag=DKM08_RS14245;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003414739.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2844901 2846736 . - . ID=gene-DKM08_RS14250;Name=DKM08_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14250;old_locus_tag=DKM08_14235 NZ_QFYX01000001.1 Protein Homology CDS 2844901 2846736 . - 0 ID=cds-WP_003899536.1;Parent=gene-DKM08_RS14250;Dbxref=GenBank:WP_003899536.1;Name=WP_003899536.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217429.1;locus_tag=DKM08_RS14250;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_003899536.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2846805 2848562 . - . ID=gene-DKM08_RS14255;Name=pknI;gbkey=Gene;gene=pknI;gene_biotype=protein_coding;locus_tag=DKM08_RS14255;old_locus_tag=DKM08_14240 NZ_QFYX01000001.1 Protein Homology CDS 2846805 2848562 . - 0 ID=cds-WP_003900593.1;Parent=gene-DKM08_RS14255;Dbxref=GenBank:WP_003900593.1;Name=WP_003900593.1;gbkey=CDS;gene=pknI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217430.1;locus_tag=DKM08_RS14255;product=serine/threonine protein kinase PknI;protein_id=WP_003900593.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2848606 2849718 . - . ID=gene-DKM08_RS14260;Name=DKM08_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14260;old_locus_tag=DKM08_14245 NZ_QFYX01000001.1 Protein Homology CDS 2848606 2849718 . - 0 ID=cds-WP_003899537.1;Parent=gene-DKM08_RS14260;Dbxref=GenBank:WP_003899537.1;Name=WP_003899537.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217431.1;locus_tag=DKM08_RS14260;product=metal-dependent hydrolase family protein;protein_id=WP_003899537.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2849746 2851323 . - . ID=gene-DKM08_RS14265;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=DKM08_RS14265;old_locus_tag=DKM08_14250 NZ_QFYX01000001.1 Protein Homology CDS 2849746 2851323 . - 0 ID=cds-WP_003414748.1;Parent=gene-DKM08_RS14265;Dbxref=GenBank:WP_003414748.1;Name=WP_003414748.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217432.1;locus_tag=DKM08_RS14265;product=signal recognition particle protein;protein_id=WP_003414748.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2851473 2853281 . + . ID=gene-DKM08_RS14270;Name=DKM08_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14270;old_locus_tag=DKM08_14255 NZ_QFYX01000001.1 Protein Homology CDS 2851473 2853281 . + 0 ID=cds-WP_003912033.1;Parent=gene-DKM08_RS14270;Dbxref=GenBank:WP_003912033.1;Name=WP_003912033.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584875.1;locus_tag=DKM08_RS14270;product=DEAD/DEAH box helicase;protein_id=WP_003912033.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2853292 2855718 . - . ID=gene-DKM08_RS14275;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=DKM08_RS14275;old_locus_tag=DKM08_14260 NZ_QFYX01000001.1 Protein Homology CDS 2853292 2855718 . - 0 ID=cds-WP_023349589.1;Parent=gene-DKM08_RS14275;Dbxref=GenBank:WP_023349589.1;Name=WP_023349589.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217434.1;locus_tag=DKM08_RS14275;product=[protein-PII] uridylyltransferase;protein_id=WP_023349589.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2855776 2856114 . - . ID=gene-DKM08_RS14280;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=DKM08_RS14280;old_locus_tag=DKM08_14265 NZ_QFYX01000001.1 Protein Homology CDS 2855776 2856114 . - 0 ID=cds-WP_003414756.1;Parent=gene-DKM08_RS14280;Dbxref=GenBank:WP_003414756.1;Name=WP_003414756.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217435.1;locus_tag=DKM08_RS14280;product=nitrogen regulatory protein P-II;protein_id=WP_003414756.1;transl_table=11 NZ_QFYX01000001.1 RefSeq gene 2856111 2857544 . - . ID=gene-DKM08_RS14285;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=DKM08_RS14285;old_locus_tag=DKM08_14270 NZ_QFYX01000001.1 Protein Homology CDS 2856111 2857544 . - 0 ID=cds-WP_003899540.1;Parent=gene-DKM08_RS14285;Dbxref=GenBank:WP_003899540.1;Name=WP_003899540.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;gene=amt;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217436.1;locus_tag=DKM08_RS14285;product=ammonium transporter;protein_id=WP_003899540.1;transl_table=11 ##sequence-region NZ_QFYX01000020.1 1 466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000020.1 RefSeq region 1 466 . + . ID=NZ_QFYX01000020.1:1..466;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000020.1 RefSeq gene 1 466 . + . ID=gene-DKM08_RS21330;Name=DKM08_RS21330;end_range=466,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21330;old_locus_tag=DKM08_21320;partial=true;start_range=.,1 NZ_QFYX01000020.1 Protein Homology CDS 1 466 . + 1 ID=cds-WP_147020961.1;Parent=gene-DKM08_RS21330;Dbxref=GenBank:WP_147020961.1;Name=WP_147020961.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;end_range=466,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014985353.1;locus_tag=DKM08_RS21330;partial=true;product=class I tRNA ligase family protein;protein_id=WP_147020961.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000021.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000021.1 RefSeq region 1 462 . + . ID=NZ_QFYX01000021.1:1..462;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000021.1 RefSeq pseudogene 1 462 . + . ID=gene-DKM08_RS21335;Name=DKM08_RS21335;end_range=462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21335;old_locus_tag=DKM08_21325;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000021.1 Protein Homology CDS 1 462 . + 0 ID=cds-DKM08_RS21335;Parent=gene-DKM08_RS21335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015889565.1;locus_tag=DKM08_RS21335;partial=true;product=transcription-repair coupling factor;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000022.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000022.1 RefSeq region 1 461 . + . ID=NZ_QFYX01000022.1:1..461;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000022.1 RefSeq gene 1 233 . + . ID=gene-DKM08_RS21340;Name=DKM08_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21340;old_locus_tag=DKM08_21330;partial=true;start_range=.,1 NZ_QFYX01000022.1 Protein Homology CDS 1 233 . + 2 ID=cds-WP_186807148.1;Parent=gene-DKM08_RS21340;Dbxref=GenBank:WP_186807148.1;Name=WP_186807148.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005250058.1;locus_tag=DKM08_RS21340;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_186807148.1;start_range=.,1;transl_table=11 NZ_QFYX01000022.1 RefSeq gene 240 461 . + . ID=gene-DKM08_RS21345;Name=DKM08_RS21345;end_range=461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21345;old_locus_tag=DKM08_21335;partial=true NZ_QFYX01000022.1 Protein Homology CDS 240 461 . + 0 ID=cds-WP_147020963.1;Parent=gene-DKM08_RS21345;Dbxref=GenBank:WP_147020963.1;Name=WP_147020963.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=461,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.6;locus_tag=DKM08_RS21345;partial=true;product=LysR family transcriptional regulator;protein_id=WP_147020963.1;transl_table=11 ##sequence-region NZ_QFYX01000023.1 1 459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000023.1 RefSeq region 1 459 . + . ID=NZ_QFYX01000023.1:1..459;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000023.1 RefSeq pseudogene 1 338 . - . ID=gene-DKM08_RS21350;Name=DKM08_RS21350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21350;old_locus_tag=DKM08_21340;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000023.1 GeneMarkS-2+ CDS 1 338 . - 0 ID=cds-DKM08_RS21350;Parent=gene-DKM08_RS21350;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21350;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000024.1 1 458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000024.1 RefSeq region 1 458 . + . ID=NZ_QFYX01000024.1:1..458;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000024.1 RefSeq gene 181 458 . + . ID=gene-DKM08_RS21360;Name=DKM08_RS21360;end_range=458,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21360;old_locus_tag=DKM08_21350;partial=true NZ_QFYX01000024.1 Protein Homology CDS 181 458 . + 0 ID=cds-WP_237085740.1;Parent=gene-DKM08_RS21360;Dbxref=GenBank:WP_237085740.1;Name=WP_237085740.1;Ontology_term=GO:0003924,GO:0005525;end_range=458,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005055596.1;locus_tag=DKM08_RS21360;partial=true;product=GTP-binding protein;protein_id=WP_237085740.1;transl_table=11 ##sequence-region NZ_QFYX01000025.1 1 456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000025.1 RefSeq region 1 456 . + . ID=NZ_QFYX01000025.1:1..456;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000025.1 RefSeq gene 1 456 . - . ID=gene-DKM08_RS21365;Name=DKM08_RS21365;end_range=456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21365;old_locus_tag=DKM08_21355;partial=true;start_range=.,1 NZ_QFYX01000025.1 Protein Homology CDS 1 456 . - 1 ID=cds-WP_186807149.1;Parent=gene-DKM08_RS21365;Dbxref=GenBank:WP_186807149.1;Name=WP_186807149.1;Ontology_term=GO:0016829;end_range=456,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011740207.1;locus_tag=DKM08_RS21365;partial=true;product=dihydrodipicolinate synthase family protein;protein_id=WP_186807149.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000026.1 1 453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000026.1 RefSeq region 1 453 . + . ID=NZ_QFYX01000026.1:1..453;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000026.1 RefSeq pseudogene 1 453 . - . ID=gene-DKM08_RS21370;Name=DKM08_RS21370;end_range=453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21370;old_locus_tag=DKM08_21360;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000026.1 Protein Homology CDS 1 453 . - 2 ID=cds-DKM08_RS21370;Parent=gene-DKM08_RS21370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215965.1;locus_tag=DKM08_RS21370;partial=true;product=transketolase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000027.1 1 450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000027.1 RefSeq region 1 450 . + . ID=NZ_QFYX01000027.1:1..450;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000027.1 RefSeq gene 1 450 . + . ID=gene-DKM08_RS21375;Name=DKM08_RS21375;end_range=450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21375;old_locus_tag=DKM08_21365;partial=true;start_range=.,1 NZ_QFYX01000027.1 Protein Homology CDS 1 450 . + 0 ID=cds-WP_272869415.1;Parent=gene-DKM08_RS21375;Dbxref=GenBank:WP_272869415.1;Name=WP_272869415.1;end_range=450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303088.1;locus_tag=DKM08_RS21375;partial=true;product=carboxyl transferase domain-containing protein;protein_id=WP_272869415.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000028.1 1 446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000028.1 RefSeq region 1 446 . + . ID=NZ_QFYX01000028.1:1..446;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 ##sequence-region NZ_QFYX01000029.1 1 445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000029.1 RefSeq region 1 445 . + . ID=NZ_QFYX01000029.1:1..445;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000029.1 RefSeq gene 28 445 . + . ID=gene-DKM08_RS21385;Name=DKM08_RS21385;end_range=445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21385;old_locus_tag=DKM08_21375;partial=true NZ_QFYX01000029.1 Protein Homology CDS 28 445 . + 0 ID=cds-WP_215727387.1;Parent=gene-DKM08_RS21385;Dbxref=GenBank:WP_215727387.1;Name=WP_215727387.1;end_range=445,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014852.6;locus_tag=DKM08_RS21385;partial=true;product=glycoside hydrolase family 20 zincin-like fold domain-containing protein;protein_id=WP_215727387.1;transl_table=11 ##sequence-region NZ_QFYX01000002.1 1 556439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000002.1 RefSeq region 1 556439 . + . ID=NZ_QFYX01000002.1:1..556439;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000002.1 RefSeq pseudogene 1 190 . + . ID=gene-DKM08_RS14290;Name=DKM08_RS14290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14290;old_locus_tag=DKM08_14275;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000002.1 Protein Homology CDS 1 190 . + 1 ID=cds-DKM08_RS14290;Parent=gene-DKM08_RS14290;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=DKM08_RS14290;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 375 1085 . + . ID=gene-DKM08_RS14295;Name=DKM08_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14295;old_locus_tag=DKM08_14280 NZ_QFYX01000002.1 Protein Homology CDS 375 1085 . + 0 ID=cds-WP_003912510.1;Parent=gene-DKM08_RS14295;Dbxref=GenBank:WP_003912510.1;Name=WP_003912510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302401.1;locus_tag=DKM08_RS14295;product=zf-HC2 domain-containing protein;protein_id=WP_003912510.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 1032 3317 . - . ID=gene-DKM08_RS14300;Name=ctpA;gbkey=Gene;gene=ctpA;gene_biotype=protein_coding;locus_tag=DKM08_RS14300;old_locus_tag=DKM08_14285 NZ_QFYX01000002.1 Protein Homology CDS 1032 3317 . - 0 ID=cds-WP_003400679.1;Parent=gene-DKM08_RS14300;Dbxref=GenBank:WP_003400679.1;Name=WP_003400679.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214606.1;locus_tag=DKM08_RS14300;product=heavy metal translocating P-type ATPase;protein_id=WP_003400679.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 3449 4216 . - . ID=gene-DKM08_RS14305;Name=mtn;gbkey=Gene;gene=mtn;gene_biotype=protein_coding;locus_tag=DKM08_RS14305;old_locus_tag=DKM08_14290 NZ_QFYX01000002.1 Protein Homology CDS 3449 4216 . - 0 ID=cds-WP_003400678.1;Parent=gene-DKM08_RS14305;Dbxref=GenBank:WP_003400678.1;Name=WP_003400678.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtn;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214605.1;locus_tag=DKM08_RS14305;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_003400678.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 4650 5420 . - . ID=gene-DKM08_RS14315;Name=DKM08_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14315;old_locus_tag=DKM08_14300 NZ_QFYX01000002.1 Protein Homology CDS 4650 5420 . - 0 ID=cds-WP_003899807.1;Parent=gene-DKM08_RS14315;Dbxref=GenBank:WP_003899807.1;Name=WP_003899807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214604.1;locus_tag=DKM08_RS14315;product=DUF2127 domain-containing protein;protein_id=WP_003899807.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 5549 6154 . - . ID=gene-DKM08_RS14320;Name=DKM08_RS14320;end_range=6154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14320;old_locus_tag=DKM08_14305;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 5549 6154 . - 0 ID=cds-DKM08_RS14320;Parent=gene-DKM08_RS14320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:1904047;end_range=6154,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019970694.1;locus_tag=DKM08_RS14320;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 6299 6778 . - . ID=gene-DKM08_RS14325;Name=DKM08_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14325;old_locus_tag=DKM08_14310 NZ_QFYX01000002.1 Protein Homology CDS 6299 6778 . - 0 ID=cds-WP_003899806.1;Parent=gene-DKM08_RS14325;Dbxref=GenBank:WP_003899806.1;Name=WP_003899806.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899806.1;locus_tag=DKM08_RS14325;product=SRPBCC family protein;protein_id=WP_003899806.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 7008 8486 . - . ID=gene-DKM08_RS14330;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=DKM08_RS14330;old_locus_tag=DKM08_14315 NZ_QFYX01000002.1 Protein Homology CDS 7008 8486 . - 0 ID=cds-WP_010950337.1;Parent=gene-DKM08_RS14330;Dbxref=GenBank:WP_010950337.1;Name=WP_010950337.1;Ontology_term=GO:0008137;gbkey=CDS;gene=hycE;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214601.1;locus_tag=DKM08_RS14330;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_010950337.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 8483 9949 . - . ID=gene-DKM08_RS14335;Name=hycQ;gbkey=Gene;gene=hycQ;gene_biotype=protein_coding;locus_tag=DKM08_RS14335;old_locus_tag=DKM08_14320 NZ_QFYX01000002.1 Protein Homology CDS 8483 9949 . - 0 ID=cds-WP_010950336.1;Parent=gene-DKM08_RS14335;Dbxref=GenBank:WP_010950336.1;Name=WP_010950336.1;gbkey=CDS;gene=hycQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214600.1;locus_tag=DKM08_RS14335;product=proton-conducting transporter membrane subunit;protein_id=WP_010950336.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 9949 10611 . - . ID=gene-DKM08_RS14340;Name=DKM08_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14340;old_locus_tag=DKM08_14325 NZ_QFYX01000002.1 Protein Homology CDS 9949 10611 . - 0 ID=cds-WP_003400661.1;Parent=gene-DKM08_RS14340;Dbxref=GenBank:WP_003400661.1;Name=WP_003400661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214599.1;locus_tag=DKM08_RS14340;product=hydrogenase HycP;protein_id=WP_003400661.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 10622 11572 . - . ID=gene-DKM08_RS14345;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=DKM08_RS14345;old_locus_tag=DKM08_14330 NZ_QFYX01000002.1 Protein Homology CDS 10622 11572 . - 0 ID=cds-WP_003900802.1;Parent=gene-DKM08_RS14345;Dbxref=GenBank:WP_003900802.1;Name=WP_003900802.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;gene=hycD;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214598.1;locus_tag=DKM08_RS14345;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_003900802.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 11572 13500 . - . ID=gene-DKM08_RS14350;Name=DKM08_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14350;old_locus_tag=DKM08_14335 NZ_QFYX01000002.1 Protein Homology CDS 11572 13500 . - 0 ID=cds-WP_010950335.1;Parent=gene-DKM08_RS14350;Dbxref=GenBank:WP_010950335.1;Name=WP_010950335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950335.1;locus_tag=DKM08_RS14350;product=oxidoreductase;protein_id=WP_010950335.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 13497 13976 . - . ID=gene-DKM08_RS14355;Name=DKM08_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14355;old_locus_tag=DKM08_14340 NZ_QFYX01000002.1 Protein Homology CDS 13497 13976 . - 0 ID=cds-WP_147020921.1;Parent=gene-DKM08_RS14355;Dbxref=GenBank:WP_147020921.1;Name=WP_147020921.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214596.2;locus_tag=DKM08_RS14355;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_147020921.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 13981 14325 . - . ID=gene-DKM08_RS14360;Name=DKM08_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14360;old_locus_tag=DKM08_14345 NZ_QFYX01000002.1 Protein Homology CDS 13981 14325 . - 0 ID=cds-WP_003400657.1;Parent=gene-DKM08_RS14360;Dbxref=GenBank:WP_003400657.1;Name=WP_003400657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214595.1;locus_tag=DKM08_RS14360;product=lsr2/espR transcriptional regulator;protein_id=WP_003400657.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 14420 14878 . - . ID=gene-DKM08_RS14365;Name=DKM08_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14365;old_locus_tag=DKM08_14350 NZ_QFYX01000002.1 Protein Homology CDS 14420 14878 . - 0 ID=cds-WP_003400656.1;Parent=gene-DKM08_RS14365;Dbxref=GenBank:WP_003400656.1;Name=WP_003400656.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214594.1;locus_tag=DKM08_RS14365;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003400656.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 14875 15696 . - . ID=gene-DKM08_RS14370;Name=DKM08_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14370;old_locus_tag=DKM08_14355 NZ_QFYX01000002.1 Protein Homology CDS 14875 15696 . - 0 ID=cds-WP_003400655.1;Parent=gene-DKM08_RS14370;Dbxref=GenBank:WP_003400655.1;Name=WP_003400655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214593.1;locus_tag=DKM08_RS14370;product=dormancy-associated translation inhibitor;protein_id=WP_003400655.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 15896 16102 . + . ID=gene-DKM08_RS14375;Name=DKM08_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14375;old_locus_tag=DKM08_14360 NZ_QFYX01000002.1 Protein Homology CDS 15896 16102 . + 0 ID=cds-WP_003400649.1;Parent=gene-DKM08_RS14375;Dbxref=GenBank:WP_003400649.1;Name=WP_003400649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408717.1;locus_tag=DKM08_RS14375;product=hypothetical protein;protein_id=WP_003400649.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 16099 16692 . + . ID=gene-DKM08_RS14380;Name=DKM08_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14380;old_locus_tag=DKM08_14365 NZ_QFYX01000002.1 Protein Homology CDS 16099 16692 . + 0 ID=cds-WP_003400645.1;Parent=gene-DKM08_RS14380;Dbxref=GenBank:WP_003400645.1;Name=WP_003400645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177616.1;locus_tag=DKM08_RS14380;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003400645.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 16767 17372 . - . ID=gene-DKM08_RS14385;Name=DKM08_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14385;old_locus_tag=DKM08_14370 NZ_QFYX01000002.1 Protein Homology CDS 16767 17372 . - 0 ID=cds-WP_003400635.1;Parent=gene-DKM08_RS14385;Dbxref=GenBank:WP_003400635.1;Name=WP_003400635.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214592.1;locus_tag=DKM08_RS14385;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400635.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 17434 18264 . + . ID=gene-DKM08_RS14390;Name=DKM08_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14390;old_locus_tag=DKM08_14375 NZ_QFYX01000002.1 Protein Homology CDS 17434 18264 . + 0 ID=cds-WP_003900801.1;Parent=gene-DKM08_RS14390;Dbxref=GenBank:WP_003900801.1;Name=WP_003900801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214591.1;locus_tag=DKM08_RS14390;product=alpha/beta fold hydrolase;protein_id=WP_003900801.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 18328 18717 . + . ID=gene-DKM08_RS14395;Name=DKM08_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14395;old_locus_tag=DKM08_14380 NZ_QFYX01000002.1 Protein Homology CDS 18328 18717 . + 0 ID=cds-WP_003400629.1;Parent=gene-DKM08_RS14395;Dbxref=GenBank:WP_003400629.1;Name=WP_003400629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913085.1;locus_tag=DKM08_RS14395;product=hypothetical protein;protein_id=WP_003400629.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 18732 19903 . - . ID=gene-DKM08_RS14400;Name=DKM08_RS14400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14400;old_locus_tag=DKM08_14385;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 18732 19903 . - 0 ID=cds-DKM08_RS14400;Parent=gene-DKM08_RS14400;Note=frameshifted;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214589.1;locus_tag=DKM08_RS14400;product=MalY/PatB family protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 19916 21151 . - . ID=gene-DKM08_RS14405;Name=DKM08_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14405;old_locus_tag=DKM08_14390 NZ_QFYX01000002.1 Protein Homology CDS 19916 21151 . - 0 ID=cds-WP_003400620.1;Parent=gene-DKM08_RS14405;Dbxref=GenBank:WP_003400620.1;Name=WP_003400620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214588.1;locus_tag=DKM08_RS14405;product=metal-dependent hydrolase family protein;protein_id=WP_003400620.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 21231 22223 . - . ID=gene-DKM08_RS14410;Name=DKM08_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14410;old_locus_tag=DKM08_14395 NZ_QFYX01000002.1 Protein Homology CDS 21231 22223 . - 0 ID=cds-WP_003899801.1;Parent=gene-DKM08_RS14410;Dbxref=GenBank:WP_003899801.1;Name=WP_003899801.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214587.1;locus_tag=DKM08_RS14410;product=ATP-binding cassette domain-containing protein;protein_id=WP_003899801.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 22226 23275 . - . ID=gene-DKM08_RS14415;Name=DKM08_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14415;old_locus_tag=DKM08_14400 NZ_QFYX01000002.1 Protein Homology CDS 22226 23275 . - 0 ID=cds-WP_003400616.1;Parent=gene-DKM08_RS14415;Dbxref=GenBank:WP_003400616.1;Name=WP_003400616.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214586.1;locus_tag=DKM08_RS14415;product=ABC transporter permease;protein_id=WP_003400616.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 23346 23618 . - . ID=gene-DKM08_RS14420;Name=DKM08_RS14420;end_range=23618,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14420;old_locus_tag=DKM08_14405;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 23346 23618 . - 0 ID=cds-DKM08_RS14420;Parent=gene-DKM08_RS14420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003676,GO:0004519,GO:0008270;end_range=23618,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020724779.1;locus_tag=DKM08_RS14420;partial=true;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 23706 24458 . - . ID=gene-DKM08_RS14425;Name=DKM08_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14425;old_locus_tag=DKM08_14410 NZ_QFYX01000002.1 Protein Homology CDS 23706 24458 . - 0 ID=cds-WP_011799071.1;Parent=gene-DKM08_RS14425;Dbxref=GenBank:WP_011799071.1;Name=WP_011799071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214585.1;locus_tag=DKM08_RS14425;product=reverse transcriptase domain-containing protein;protein_id=WP_011799071.1;transl_table=11 NZ_QFYX01000002.1 cmsearch riboswitch 24650 24740 . + . ID=id-NZ_QFYX01000002.1:24650..24740;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000002.1 RefSeq gene 25048 26325 . + . ID=gene-DKM08_RS14435;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=DKM08_RS14435;old_locus_tag=DKM08_14420 NZ_QFYX01000002.1 Protein Homology CDS 25048 26325 . + 0 ID=cds-WP_003400602.1;Parent=gene-DKM08_RS14435;Dbxref=GenBank:WP_003400602.1;Name=WP_003400602.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214584.1;locus_tag=DKM08_RS14435;product=serine hydroxymethyltransferase;protein_id=WP_003400602.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 26322 27707 . + . ID=gene-DKM08_RS14440;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=DKM08_RS14440;old_locus_tag=DKM08_14425 NZ_QFYX01000002.1 Protein Homology CDS 26322 27707 . + 0 ID=cds-WP_003400600.1;Parent=gene-DKM08_RS14440;Dbxref=GenBank:WP_003400600.1;Name=WP_003400600.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;gene=sdaA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214583.1;locus_tag=DKM08_RS14440;product=L-serine ammonia-lyase;protein_id=WP_003400600.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 27732 28643 . - . ID=gene-DKM08_RS14445;Name=DKM08_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14445;old_locus_tag=DKM08_14430 NZ_QFYX01000002.1 Protein Homology CDS 27732 28643 . - 0 ID=cds-WP_003899798.1;Parent=gene-DKM08_RS14445;Dbxref=GenBank:WP_003899798.1;Name=WP_003899798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214582.1;locus_tag=DKM08_RS14445;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003899798.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 28746 29315 . + . ID=gene-DKM08_RS14450;Name=DKM08_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14450;old_locus_tag=DKM08_14435 NZ_QFYX01000002.1 Protein Homology CDS 28746 29315 . + 0 ID=cds-WP_003400591.1;Parent=gene-DKM08_RS14450;Dbxref=GenBank:WP_003400591.1;Name=WP_003400591.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214581.1;locus_tag=DKM08_RS14450;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400591.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 29433 31670 . + . ID=gene-DKM08_RS14455;Name=DKM08_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14455;old_locus_tag=DKM08_14440 NZ_QFYX01000002.1 Protein Homology CDS 29433 31670 . + 0 ID=cds-WP_003400583.1;Parent=gene-DKM08_RS14455;Dbxref=GenBank:WP_003400583.1;Name=WP_003400583.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214580.1;locus_tag=DKM08_RS14455;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003400583.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 31722 32123 . - . ID=gene-DKM08_RS14460;Name=vapC1;gbkey=Gene;gene=vapC1;gene_biotype=protein_coding;locus_tag=DKM08_RS14460;old_locus_tag=DKM08_14445 NZ_QFYX01000002.1 Protein Homology CDS 31722 32123 . - 0 ID=cds-WP_003400580.1;Parent=gene-DKM08_RS14460;Dbxref=GenBank:WP_003400580.1;Name=WP_003400580.1;gbkey=CDS;gene=vapC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214579.1;locus_tag=DKM08_RS14460;product=type II toxin-antitoxin system ribonuclease VapC1;protein_id=WP_003400580.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 32116 32355 . - . ID=gene-DKM08_RS14465;Name=DKM08_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14465;old_locus_tag=DKM08_14450 NZ_QFYX01000002.1 Protein Homology CDS 32116 32355 . - 0 ID=cds-WP_011799070.1;Parent=gene-DKM08_RS14465;Dbxref=GenBank:WP_011799070.1;Name=WP_011799070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408701.1;locus_tag=DKM08_RS14465;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_011799070.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 32422 35361 . - . ID=gene-DKM08_RS14470;Name=DKM08_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14470;old_locus_tag=DKM08_14455 NZ_QFYX01000002.1 Protein Homology CDS 32422 35361 . - 0 ID=cds-WP_003901785.1;Parent=gene-DKM08_RS14470;Dbxref=GenBank:WP_003901785.1;Name=WP_003901785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214578.1;locus_tag=DKM08_RS14470;product=UPF0182 family protein;protein_id=WP_003901785.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 35402 35563 . - . ID=gene-DKM08_RS14475;Name=DKM08_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14475;old_locus_tag=DKM08_14460 NZ_QFYX01000002.1 Protein Homology CDS 35402 35563 . - 0 ID=cds-WP_003899796.1;Parent=gene-DKM08_RS14475;Dbxref=GenBank:WP_003899796.1;Name=WP_003899796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030026.1;locus_tag=DKM08_RS14475;product=hypothetical protein;protein_id=WP_003899796.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 35619 37058 . - . ID=gene-DKM08_RS14480;Name=DKM08_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14480;old_locus_tag=DKM08_14465 NZ_QFYX01000002.1 Protein Homology CDS 35619 37058 . - 0 ID=cds-WP_003901784.1;Parent=gene-DKM08_RS14480;Dbxref=GenBank:WP_003901784.1;Name=WP_003901784.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214577.1;locus_tag=DKM08_RS14480;product=FAD-binding oxidoreductase;protein_id=WP_003901784.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 37287 38429 . - . ID=gene-DKM08_RS14485;Name=DKM08_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14485;old_locus_tag=DKM08_14470 NZ_QFYX01000002.1 Protein Homology CDS 37287 38429 . - 0 ID=cds-WP_010950332.1;Parent=gene-DKM08_RS14485;Dbxref=GenBank:WP_010950332.1;Name=WP_010950332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177689.1;locus_tag=DKM08_RS14485;product=glycoside hydrolase family 6 protein;protein_id=WP_010950332.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 38631 38969 . + . ID=gene-DKM08_RS14495;Name=DKM08_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14495;old_locus_tag=DKM08_14480 NZ_QFYX01000002.1 Protein Homology CDS 38631 38969 . + 0 ID=cds-WP_003899794.1;Parent=gene-DKM08_RS14495;Dbxref=GenBank:WP_003899794.1;Name=WP_003899794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408697.1;locus_tag=DKM08_RS14495;product=hypothetical protein;protein_id=WP_003899794.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 39014 40072 . - . ID=gene-DKM08_RS14500;Name=darG;gbkey=Gene;gene=darG;gene_biotype=protein_coding;locus_tag=DKM08_RS14500;old_locus_tag=DKM08_14485 NZ_QFYX01000002.1 Protein Homology CDS 39014 40072 . - 0 ID=cds-WP_003400551.1;Parent=gene-DKM08_RS14500;Dbxref=GenBank:WP_003400551.1;Name=WP_003400551.1;gbkey=CDS;gene=darG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214574.1;locus_tag=DKM08_RS14500;product=toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG;protein_id=WP_003400551.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 40089 40781 . - . ID=gene-DKM08_RS14505;Name=darT;gbkey=Gene;gene=darT;gene_biotype=protein_coding;locus_tag=DKM08_RS14505;old_locus_tag=DKM08_14490 NZ_QFYX01000002.1 Protein Homology CDS 40089 40781 . - 0 ID=cds-WP_003400548.1;Parent=gene-DKM08_RS14505;Dbxref=GenBank:WP_003400548.1;Name=WP_003400548.1;gbkey=CDS;gene=darT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214573.1;locus_tag=DKM08_RS14505;product=toxin-antitoxin system toxin DarT;protein_id=WP_003400548.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 40961 43585 . - . ID=gene-DKM08_RS14510;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=DKM08_RS14510;old_locus_tag=DKM08_14495 NZ_QFYX01000002.1 Protein Homology CDS 40961 43585 . - 0 ID=cds-WP_003400547.1;Parent=gene-DKM08_RS14510;Dbxref=GenBank:WP_003400547.1;Name=WP_003400547.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214572.1;locus_tag=DKM08_RS14510;product=replicative DNA helicase;protein_id=WP_003400547.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 43564 44085 . - . ID=gene-DKM08_RS14515;Name=DKM08_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14515;old_locus_tag=DKM08_14500 NZ_QFYX01000002.1 Protein Homology CDS 43564 44085 . - 0 ID=cds-WP_003900797.1;Parent=gene-DKM08_RS14515;Dbxref=GenBank:WP_003900797.1;Name=WP_003900797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214571.1;locus_tag=DKM08_RS14515;product=hypothetical protein;protein_id=WP_003900797.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 44114 44572 . - . ID=gene-DKM08_RS14520;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=DKM08_RS14520;old_locus_tag=DKM08_14505 NZ_QFYX01000002.1 Protein Homology CDS 44114 44572 . - 0 ID=cds-WP_003400543.1;Parent=gene-DKM08_RS14520;Dbxref=GenBank:WP_003400543.1;Name=WP_003400543.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214570.1;locus_tag=DKM08_RS14520;product=50S ribosomal protein L9;protein_id=WP_003400543.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 44605 44859 . - . ID=gene-DKM08_RS14525;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DKM08_RS14525;old_locus_tag=DKM08_14510 NZ_QFYX01000002.1 Protein Homology CDS 44605 44859 . - 0 ID=cds-WP_003400540.1;Parent=gene-DKM08_RS14525;Dbxref=GenBank:WP_003400540.1;Name=WP_003400540.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874730.1;locus_tag=DKM08_RS14525;product=30S ribosomal protein S18;protein_id=WP_003400540.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 44901 45395 . - . ID=gene-DKM08_RS14530;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=DKM08_RS14530;old_locus_tag=DKM08_14515 NZ_QFYX01000002.1 Protein Homology CDS 44901 45395 . - 0 ID=cds-WP_003400534.1;Parent=gene-DKM08_RS14530;Dbxref=GenBank:WP_003400534.1;Name=WP_003400534.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214568.1;locus_tag=DKM08_RS14530;product=single-stranded DNA-binding protein;protein_id=WP_003400534.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 45499 45789 . - . ID=gene-DKM08_RS14535;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=DKM08_RS14535;old_locus_tag=DKM08_14520 NZ_QFYX01000002.1 Protein Homology CDS 45499 45789 . - 0 ID=cds-WP_003400520.1;Parent=gene-DKM08_RS14535;Dbxref=GenBank:WP_003400520.1;Name=WP_003400520.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214567.1;locus_tag=DKM08_RS14535;product=30S ribosomal protein S6;protein_id=WP_003400520.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 46008 46646 . - . ID=gene-DKM08_RS14540;Name=DKM08_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14540;old_locus_tag=DKM08_14525 NZ_QFYX01000002.1 Protein Homology CDS 46008 46646 . - 0 ID=cds-WP_003912418.1;Parent=gene-DKM08_RS14540;Dbxref=GenBank:WP_003912418.1;Name=WP_003912418.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912418.1;locus_tag=DKM08_RS14540;product=DJ-1/PfpI family protein;protein_id=WP_003912418.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 46603 48285 . - . ID=gene-DKM08_RS14545;Name=DKM08_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14545;old_locus_tag=DKM08_14530 NZ_QFYX01000002.1 Protein Homology CDS 46603 48285 . - 0 ID=cds-WP_003400514.1;Parent=gene-DKM08_RS14545;Dbxref=GenBank:WP_003400514.1;Name=WP_003400514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214565.1;locus_tag=DKM08_RS14545;product=glycosyltransferase family 87 protein;protein_id=WP_003400514.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 48282 50753 . - . ID=gene-DKM08_RS14550;Name=ponA1;gbkey=Gene;gene=ponA1;gene_biotype=protein_coding;locus_tag=DKM08_RS14550;old_locus_tag=DKM08_14535 NZ_QFYX01000002.1 Protein Homology CDS 48282 50753 . - 0 ID=cds-WP_015385225.1;Parent=gene-DKM08_RS14550;Dbxref=GenBank:WP_015385225.1;Name=WP_015385225.1;gbkey=CDS;gene=ponA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899790.1;locus_tag=DKM08_RS14550;product=transglycosylase/D%2CD-transpeptidase PonA1;protein_id=WP_015385225.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 50746 51180 . - . ID=gene-DKM08_RS14555;Name=DKM08_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14555;old_locus_tag=DKM08_14540 NZ_QFYX01000002.1 Protein Homology CDS 50746 51180 . - 0 ID=cds-WP_003899789.1;Parent=gene-DKM08_RS14555;Dbxref=GenBank:WP_003899789.1;Name=WP_003899789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392073.1;locus_tag=DKM08_RS14555;product=DUF5318 family protein;protein_id=WP_003899789.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 51293 52162 . + . ID=gene-DKM08_RS14560;Name=DKM08_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14560;old_locus_tag=DKM08_14545 NZ_QFYX01000002.1 Protein Homology CDS 51293 52162 . + 0 ID=cds-WP_010950330.1;Parent=gene-DKM08_RS14560;Dbxref=GenBank:WP_010950330.1;Name=WP_010950330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214562.1;locus_tag=DKM08_RS14560;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_010950330.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 52263 52805 . + . ID=gene-DKM08_RS14565;Name=DKM08_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14565;old_locus_tag=DKM08_14550 NZ_QFYX01000002.1 Protein Homology CDS 52263 52805 . + 0 ID=cds-WP_003899787.1;Parent=gene-DKM08_RS14565;Dbxref=GenBank:WP_003899787.1;Name=WP_003899787.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214561.1;locus_tag=DKM08_RS14565;product=PadR family transcriptional regulator;protein_id=WP_003899787.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 52866 53969 . + . ID=gene-DKM08_RS14570;Name=DKM08_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14570;old_locus_tag=DKM08_14555 NZ_QFYX01000002.1 Protein Homology CDS 52866 53969 . + 0 ID=cds-WP_003400492.1;Parent=gene-DKM08_RS14570;Dbxref=GenBank:WP_003400492.1;Name=WP_003400492.1;Ontology_term=GO:0006021,GO:0008654,GO:0004512;gbkey=CDS;go_function=inositol-3-phosphate synthase activity|0004512||IEA;go_process=inositol biosynthetic process|0006021||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214560.1;locus_tag=DKM08_RS14570;product=inositol-3-phosphate synthase;protein_id=WP_003400492.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 54051 54947 . + . ID=gene-DKM08_RS14575;Name=DKM08_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14575;old_locus_tag=DKM08_14560 NZ_QFYX01000002.1 Protein Homology CDS 54051 54947 . + 0 ID=cds-WP_003400489.1;Parent=gene-DKM08_RS14575;Dbxref=GenBank:WP_003400489.1;Name=WP_003400489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214559.1;locus_tag=DKM08_RS14575;product=alpha/beta fold hydrolase;protein_id=WP_003400489.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 54963 55757 . + . ID=gene-DKM08_RS14580;Name=DKM08_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14580;old_locus_tag=DKM08_14565 NZ_QFYX01000002.1 Protein Homology CDS 54963 55757 . + 0 ID=cds-WP_003400486.1;Parent=gene-DKM08_RS14580;Dbxref=GenBank:WP_003400486.1;Name=WP_003400486.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214558.1;locus_tag=DKM08_RS14580;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003400486.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 55890 56624 . + . ID=gene-DKM08_RS14585;Name=DKM08_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14585;old_locus_tag=DKM08_14570 NZ_QFYX01000002.1 Protein Homology CDS 55890 56624 . + 0 ID=cds-WP_003899786.1;Parent=gene-DKM08_RS14585;Dbxref=GenBank:WP_003899786.1;Name=WP_003899786.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214557.1;locus_tag=DKM08_RS14585;product=GntR family transcriptional regulator;protein_id=WP_003899786.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 56906 57409 . + . ID=gene-DKM08_RS14590;Name=DKM08_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14590;old_locus_tag=DKM08_14575 NZ_QFYX01000002.1 Protein Homology CDS 56906 57409 . + 0 ID=cds-WP_003912416.1;Parent=gene-DKM08_RS14590;Dbxref=GenBank:WP_003912416.1;Name=WP_003912416.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771688.1;locus_tag=DKM08_RS14590;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003912416.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 57519 60428 . - . ID=gene-DKM08_RS14595;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=DKM08_RS14595;old_locus_tag=DKM08_14580 NZ_QFYX01000002.1 Protein Homology CDS 57519 60428 . - 0 ID=cds-WP_003900794.1;Parent=gene-DKM08_RS14595;Dbxref=GenBank:WP_003900794.1;Name=WP_003900794.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214555.1;locus_tag=DKM08_RS14595;product=leucine--tRNA ligase;protein_id=WP_003900794.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 60625 61557 . + . ID=gene-DKM08_RS14600;Name=DKM08_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14600;old_locus_tag=DKM08_14585 NZ_QFYX01000002.1 Protein Homology CDS 60625 61557 . + 0 ID=cds-WP_003900793.1;Parent=gene-DKM08_RS14600;Dbxref=GenBank:WP_003900793.1;Name=WP_003900793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214554.2;locus_tag=DKM08_RS14600;product=LpqN/LpqT family lipoprotein;protein_id=WP_003900793.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 61639 61986 . + . ID=gene-DKM08_RS14605;Name=DKM08_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14605;old_locus_tag=DKM08_14590 NZ_QFYX01000002.1 Protein Homology CDS 61639 61986 . + 0 ID=cds-WP_003400465.1;Parent=gene-DKM08_RS14605;Dbxref=GenBank:WP_003400465.1;Name=WP_003400465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214553.1;locus_tag=DKM08_RS14605;product=membrane protein;protein_id=WP_003400465.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 62078 62686 . - . ID=gene-DKM08_RS14610;Name=DKM08_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14610;old_locus_tag=DKM08_14595 NZ_QFYX01000002.1 Protein Homology CDS 62078 62686 . - 0 ID=cds-WP_003400460.1;Parent=gene-DKM08_RS14610;Dbxref=GenBank:WP_003400460.1;Name=WP_003400460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214552.1;locus_tag=DKM08_RS14610;product=YqgE/AlgH family protein;protein_id=WP_003400460.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 62788 64113 . + . ID=gene-DKM08_RS14615;Name=DKM08_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14615;old_locus_tag=DKM08_14600 NZ_QFYX01000002.1 Protein Homology CDS 62788 64113 . + 0 ID=cds-WP_003400431.1;Parent=gene-DKM08_RS14615;Dbxref=GenBank:WP_003400431.1;Name=WP_003400431.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214551.1;locus_tag=DKM08_RS14615;product=MFS transporter;protein_id=WP_003400431.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 64161 64934 . + . ID=gene-DKM08_RS14620;Name=DKM08_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14620;old_locus_tag=DKM08_14605 NZ_QFYX01000002.1 Protein Homology CDS 64161 64934 . + 0 ID=cds-WP_003400427.1;Parent=gene-DKM08_RS14620;Dbxref=GenBank:WP_003400427.1;Name=WP_003400427.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214550.1;locus_tag=DKM08_RS14620;product=TIGR03084 family metal-binding protein;protein_id=WP_003400427.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 65043 66731 . - . ID=gene-DKM08_RS14625;Name=fadD34;gbkey=Gene;gene=fadD34;gene_biotype=protein_coding;locus_tag=DKM08_RS14625;old_locus_tag=DKM08_14610 NZ_QFYX01000002.1 Protein Homology CDS 65043 66731 . - 0 ID=cds-WP_003400425.1;Parent=gene-DKM08_RS14625;Dbxref=GenBank:WP_003400425.1;Name=WP_003400425.1;gbkey=CDS;gene=fadD34;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177686.1;locus_tag=DKM08_RS14625;product=fatty acyl-AMP ligase FadD34;protein_id=WP_003400425.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 66728 67123 . - . ID=gene-DKM08_RS14630;Name=DKM08_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14630;old_locus_tag=DKM08_14615 NZ_QFYX01000002.1 Protein Homology CDS 66728 67123 . - 0 ID=cds-WP_003400421.1;Parent=gene-DKM08_RS14630;Dbxref=GenBank:WP_003400421.1;Name=WP_003400421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214548.1;locus_tag=DKM08_RS14630;product=nuclear transport factor 2 family protein;protein_id=WP_003400421.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 67120 67383 . - . ID=gene-DKM08_RS14635;Name=acpA;gbkey=Gene;gene=acpA;gene_biotype=protein_coding;locus_tag=DKM08_RS14635;old_locus_tag=DKM08_14620 NZ_QFYX01000002.1 Protein Homology CDS 67120 67383 . - 0 ID=cds-WP_003400418.1;Parent=gene-DKM08_RS14635;Dbxref=GenBank:WP_003400418.1;Name=WP_003400418.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;gene=acpA;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214547.1;locus_tag=DKM08_RS14635;product=acyl carrier protein;protein_id=WP_003400418.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 67380 69695 . - . ID=gene-DKM08_RS14640;Name=DKM08_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14640;old_locus_tag=DKM08_14625 NZ_QFYX01000002.1 Protein Homology CDS 67380 69695 . - 0 ID=cds-WP_003905217.1;Parent=gene-DKM08_RS14640;Dbxref=GenBank:WP_003905217.1;Name=WP_003905217.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214546.1;locus_tag=DKM08_RS14640;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003905217.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 70298 70423 . - . ID=gene-DKM08_RS22560;Name=DKM08_RS22560;end_range=70423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22560;partial=true;pseudo=true;start_range=.,70298 NZ_QFYX01000002.1 Protein Homology CDS 70298 70423 . - 0 ID=cds-DKM08_RS22560;Parent=gene-DKM08_RS22560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=70423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630641.1;locus_tag=DKM08_RS22560;partial=true;product=hypothetical protein;pseudo=true;start_range=.,70298;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 70437 70766 . - . ID=gene-DKM08_RS14655;Name=DKM08_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14655;old_locus_tag=DKM08_14640 NZ_QFYX01000002.1 Protein Homology CDS 70437 70766 . - 0 ID=cds-WP_147020922.1;Parent=gene-DKM08_RS14655;Dbxref=GenBank:WP_147020922.1;Name=WP_147020922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214544.1;locus_tag=DKM08_RS14655;product=DUF2710 domain-containing protein;protein_id=WP_147020922.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 70836 71933 . - . ID=gene-DKM08_RS14660;Name=DKM08_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14660;old_locus_tag=DKM08_14645 NZ_QFYX01000002.1 Protein Homology CDS 70836 71933 . - 0 ID=cds-WP_010950329.1;Parent=gene-DKM08_RS14660;Dbxref=GenBank:WP_010950329.1;Name=WP_010950329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214543.1;locus_tag=DKM08_RS14660;product=DUF5631 domain-containing protein;protein_id=WP_010950329.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 72023 72166 . + . ID=gene-DKM08_RS21685;Name=DKM08_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21685 NZ_QFYX01000002.1 Protein Homology CDS 72023 72166 . + 0 ID=cds-WP_003400408.1;Parent=gene-DKM08_RS21685;Dbxref=GenBank:WP_003400408.1;Name=WP_003400408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400408.1;locus_tag=DKM08_RS21685;product=hypothetical protein;protein_id=WP_003400408.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 72171 72476 . - . ID=gene-DKM08_RS14665;Name=DKM08_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14665;old_locus_tag=DKM08_14650 NZ_QFYX01000002.1 Protein Homology CDS 72171 72476 . - 0 ID=cds-WP_003400405.1;Parent=gene-DKM08_RS14665;Dbxref=GenBank:WP_003400405.1;Name=WP_003400405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214542.1;locus_tag=DKM08_RS14665;product=DUF2694 domain-containing protein;protein_id=WP_003400405.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 72484 72801 . - . ID=gene-DKM08_RS14670;Name=DKM08_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14670;old_locus_tag=DKM08_14655 NZ_QFYX01000002.1 Protein Homology CDS 72484 72801 . - 0 ID=cds-WP_003400401.1;Parent=gene-DKM08_RS14670;Dbxref=GenBank:WP_003400401.1;Name=WP_003400401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214541.1;locus_tag=DKM08_RS14670;product=ESX-1 secretion-associated protein;protein_id=WP_003400401.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 72839 74254 . - . ID=gene-DKM08_RS14675;Name=DKM08_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14675;old_locus_tag=DKM08_14660 NZ_QFYX01000002.1 Protein Homology CDS 72839 74254 . - 0 ID=cds-WP_024456144.1;Parent=gene-DKM08_RS14675;Dbxref=GenBank:WP_024456144.1;Name=WP_024456144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302351.1;locus_tag=DKM08_RS14675;product=DUF4226 domain-containing protein;protein_id=WP_024456144.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 74387 74749 . - . ID=gene-DKM08_RS14680;Name=DKM08_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14680;old_locus_tag=DKM08_14665 NZ_QFYX01000002.1 Protein Homology CDS 74387 74749 . - 0 ID=cds-WP_010950327.1;Parent=gene-DKM08_RS14680;Dbxref=GenBank:WP_010950327.1;Name=WP_010950327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214539.1;locus_tag=DKM08_RS14680;product=DUF4226 domain-containing protein;protein_id=WP_010950327.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 74787 75631 . - . ID=gene-DKM08_RS14685;Name=DKM08_RS14685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14685;old_locus_tag=DKM08_14670;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 74787 75631 . - 0 ID=cds-DKM08_RS14685;Parent=gene-DKM08_RS14685;Note=frameshifted;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214538.1;locus_tag=DKM08_RS14685;product=C40 family peptidase;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 75628 76398 . - . ID=gene-DKM08_RS14690;Name=DKM08_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14690;old_locus_tag=DKM08_14675 NZ_QFYX01000002.1 Protein Homology CDS 75628 76398 . - 0 ID=cds-WP_003400391.1;Parent=gene-DKM08_RS14690;Dbxref=GenBank:WP_003400391.1;Name=WP_003400391.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214537.1;locus_tag=DKM08_RS14690;product=helix-turn-helix domain-containing protein;protein_id=WP_003400391.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 76551 76970 . + . ID=gene-DKM08_RS14695;Name=whiB5;gbkey=Gene;gene=whiB5;gene_biotype=protein_coding;locus_tag=DKM08_RS14695;old_locus_tag=DKM08_14680 NZ_QFYX01000002.1 Protein Homology CDS 76551 76970 . + 0 ID=cds-WP_003400388.1;Parent=gene-DKM08_RS14695;Dbxref=GenBank:WP_003400388.1;Name=WP_003400388.1;gbkey=CDS;gene=whiB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214536.1;locus_tag=DKM08_RS14695;product=transcriptional regulator WhiB5;protein_id=WP_003400388.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 77112 78080 . + . ID=gene-DKM08_RS14700;Name=DKM08_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14700;old_locus_tag=DKM08_14685 NZ_QFYX01000002.1 Protein Homology CDS 77112 78080 . + 0 ID=cds-WP_003400382.1;Parent=gene-DKM08_RS14700;Dbxref=GenBank:WP_003400382.1;Name=WP_003400382.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214535.1;locus_tag=DKM08_RS14700;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003400382.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 78267 78349 . - . ID=gene-DKM08_RS14705;Name=DKM08_RS14705;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS14705;old_locus_tag=DKM08_14690 NZ_QFYX01000002.1 tRNAscan-SE tRNA 78267 78349 . - . ID=rna-DKM08_RS14705;Parent=gene-DKM08_RS14705;anticodon=(pos:complement(78314..78316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS14705;product=tRNA-Leu NZ_QFYX01000002.1 tRNAscan-SE exon 78267 78349 . - . ID=exon-DKM08_RS14705-1;Parent=rna-DKM08_RS14705;anticodon=(pos:complement(78314..78316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS14705;product=tRNA-Leu NZ_QFYX01000002.1 RefSeq gene 78549 80114 . + . ID=gene-DKM08_RS14710;Name=fhaA;gbkey=Gene;gene=fhaA;gene_biotype=protein_coding;locus_tag=DKM08_RS14710;old_locus_tag=DKM08_14695 NZ_QFYX01000002.1 Protein Homology CDS 78549 80114 . + 0 ID=cds-WP_010950325.1;Parent=gene-DKM08_RS14710;Dbxref=GenBank:WP_010950325.1;Name=WP_010950325.1;gbkey=CDS;gene=fhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214534.1;locus_tag=DKM08_RS14710;product=cell division-associated protein FhaA;protein_id=WP_010950325.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 80238 80705 . + . ID=gene-DKM08_RS14715;Name=fhaB;gbkey=Gene;gene=fhaB;gene_biotype=protein_coding;locus_tag=DKM08_RS14715;old_locus_tag=DKM08_14700 NZ_QFYX01000002.1 Protein Homology CDS 80238 80705 . + 0 ID=cds-WP_003400373.1;Parent=gene-DKM08_RS14715;Dbxref=GenBank:WP_003400373.1;Name=WP_003400373.1;gbkey=CDS;gene=fhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214533.1;locus_tag=DKM08_RS14715;product=FHA domain-containing protein FhaB/FipA;protein_id=WP_003400373.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 80803 82338 . + . ID=gene-DKM08_RS14720;Name=pstP;gbkey=Gene;gene=pstP;gene_biotype=protein_coding;locus_tag=DKM08_RS14720;old_locus_tag=DKM08_14705 NZ_QFYX01000002.1 Protein Homology CDS 80803 82338 . + 0 ID=cds-WP_015385224.1;Parent=gene-DKM08_RS14720;Dbxref=GenBank:WP_015385224.1;Name=WP_015385224.1;gbkey=CDS;gene=pstP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385224.1;locus_tag=DKM08_RS14720;product=serine/threonine phosphatase PstP;protein_id=WP_015385224.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 82335 83744 . + . ID=gene-DKM08_RS14725;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=DKM08_RS14725;old_locus_tag=DKM08_14710 NZ_QFYX01000002.1 Protein Homology CDS 82335 83744 . + 0 ID=cds-WP_003400364.1;Parent=gene-DKM08_RS14725;Dbxref=GenBank:WP_003400364.1;Name=WP_003400364.1;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214531.1;locus_tag=DKM08_RS14725;product=cell shape-determining peptidoglycan glycosyltransferase RodA;protein_id=WP_003400364.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 83741 85216 . + . ID=gene-DKM08_RS14730;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;locus_tag=DKM08_RS14730;old_locus_tag=DKM08_14715 NZ_QFYX01000002.1 Protein Homology CDS 83741 85216 . + 0 ID=cds-WP_003899775.1;Parent=gene-DKM08_RS14730;Dbxref=GenBank:WP_003899775.1;Name=WP_003899775.1;gbkey=CDS;gene=pbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214530.1;locus_tag=DKM08_RS14730;product=D%2CD-transpeptidase PbpA;protein_id=WP_003899775.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 85213 86508 . + . ID=gene-DKM08_RS14735;Name=pknA;gbkey=Gene;gene=pknA;gene_biotype=protein_coding;locus_tag=DKM08_RS14735;old_locus_tag=DKM08_14720 NZ_QFYX01000002.1 Protein Homology CDS 85213 86508 . + 0 ID=cds-WP_003400358.1;Parent=gene-DKM08_RS14735;Dbxref=GenBank:WP_003400358.1;Name=WP_003400358.1;gbkey=CDS;gene=pknA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214529.1;locus_tag=DKM08_RS14735;product=serine/threonine protein kinase PknA;protein_id=WP_003400358.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 86505 88385 . + . ID=gene-DKM08_RS14740;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=DKM08_RS14740;old_locus_tag=DKM08_14725 NZ_QFYX01000002.1 Protein Homology CDS 86505 88385 . + 0 ID=cds-WP_003400356.1;Parent=gene-DKM08_RS14740;Dbxref=GenBank:WP_003400356.1;Name=WP_003400356.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214528.1;locus_tag=DKM08_RS14740;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_003400356.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 88363 89061 . - . ID=gene-DKM08_RS14745;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=DKM08_RS14745;old_locus_tag=DKM08_14730 NZ_QFYX01000002.1 Protein Homology CDS 88363 89061 . - 0 ID=cds-WP_003400352.1;Parent=gene-DKM08_RS14745;Dbxref=GenBank:WP_003400352.1;Name=WP_003400352.1;gbkey=CDS;gene=trpG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177615.1;locus_tag=DKM08_RS14745;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_003400352.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 89098 89841 . - . ID=gene-DKM08_RS14750;Name=DKM08_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14750;old_locus_tag=DKM08_14735 NZ_QFYX01000002.1 Protein Homology CDS 89098 89841 . - 0 ID=cds-WP_015291828.1;Parent=gene-DKM08_RS14750;Dbxref=GenBank:WP_015291828.1;Name=WP_015291828.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008262548.1;locus_tag=DKM08_RS14750;product=DUF881 domain-containing protein;protein_id=WP_015291828.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 89980 90261 . + . ID=gene-DKM08_RS14755;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=DKM08_RS14755;old_locus_tag=DKM08_14740 NZ_QFYX01000002.1 Protein Homology CDS 89980 90261 . + 0 ID=cds-WP_003400344.1;Parent=gene-DKM08_RS14755;Dbxref=GenBank:WP_003400344.1;Name=WP_003400344.1;gbkey=CDS;gene=crgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214525.1;locus_tag=DKM08_RS14755;product=cell division protein CrgA;protein_id=WP_003400344.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 90417 90841 . + . ID=gene-DKM08_RS14760;Name=DKM08_RS14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14760;old_locus_tag=DKM08_14745;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 90417 90841 . + 0 ID=cds-DKM08_RS14760;Parent=gene-DKM08_RS14760;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214524.1;locus_tag=DKM08_RS14760;product=PH domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 90798 90950 . + . ID=gene-DKM08_RS21690;Name=DKM08_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21690 NZ_QFYX01000002.1 Protein Homology CDS 90798 90950 . + 0 ID=cds-WP_003907166.1;Parent=gene-DKM08_RS21690;Dbxref=GenBank:WP_003907166.1;Name=WP_003907166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907166.1;locus_tag=DKM08_RS21690;product=hypothetical protein;protein_id=WP_003907166.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 90958 91506 . - . ID=gene-DKM08_RS14765;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;locus_tag=DKM08_RS14765;old_locus_tag=DKM08_14750 NZ_QFYX01000002.1 Protein Homology CDS 90958 91506 . - 0 ID=cds-WP_023349413.1;Parent=gene-DKM08_RS14765;Dbxref=GenBank:WP_023349413.1;Name=WP_023349413.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400321.1;locus_tag=DKM08_RS14765;product=peptidylprolyl isomerase PpiA;protein_id=WP_023349413.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 91663 92100 . + . ID=gene-DKM08_RS14770;Name=cwsA;gbkey=Gene;gene=cwsA;gene_biotype=protein_coding;locus_tag=DKM08_RS14770;old_locus_tag=DKM08_14755 NZ_QFYX01000002.1 Protein Homology CDS 91663 92100 . + 0 ID=cds-WP_003400307.1;Parent=gene-DKM08_RS14770;Dbxref=GenBank:WP_003400307.1;Name=WP_003400307.1;gbkey=CDS;gene=cwsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400307.1;locus_tag=DKM08_RS14770;product=cell wall synthesis protein CwsA;protein_id=WP_003400307.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 92282 92419 . + . ID=gene-DKM08_RS14775;Name=DKM08_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14775 NZ_QFYX01000002.1 GeneMarkS-2+ CDS 92282 92419 . + 0 ID=cds-WP_003400297.1;Parent=gene-DKM08_RS14775;Dbxref=GenBank:WP_003400297.1;Name=WP_003400297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS14775;product=hypothetical protein;protein_id=WP_003400297.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 92558 92749 . - . ID=gene-DKM08_RS14780;Name=DKM08_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14780;old_locus_tag=DKM08_14760 NZ_QFYX01000002.1 Protein Homology CDS 92558 92749 . - 0 ID=cds-WP_003400294.1;Parent=gene-DKM08_RS14780;Dbxref=GenBank:WP_003400294.1;Name=WP_003400294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400294.1;locus_tag=DKM08_RS14780;product=hypothetical protein;protein_id=WP_003400294.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 92790 92862 . - . ID=gene-DKM08_RS14785;Name=DKM08_RS14785;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS14785;old_locus_tag=DKM08_14765 NZ_QFYX01000002.1 tRNAscan-SE tRNA 92790 92862 . - . ID=rna-DKM08_RS14785;Parent=gene-DKM08_RS14785;anticodon=(pos:complement(92827..92829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS14785;product=tRNA-Ala NZ_QFYX01000002.1 tRNAscan-SE exon 92790 92862 . - . ID=exon-DKM08_RS14785-1;Parent=rna-DKM08_RS14785;anticodon=(pos:complement(92827..92829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS14785;product=tRNA-Ala NZ_QFYX01000002.1 RefSeq gene 93014 93087 . - . ID=gene-DKM08_RS14790;Name=DKM08_RS14790;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS14790;old_locus_tag=DKM08_14770 NZ_QFYX01000002.1 tRNAscan-SE tRNA 93014 93087 . - . ID=rna-DKM08_RS14790;Parent=gene-DKM08_RS14790;anticodon=(pos:complement(93051..93053));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS14790;product=tRNA-Ile NZ_QFYX01000002.1 tRNAscan-SE exon 93014 93087 . - . ID=exon-DKM08_RS14790-1;Parent=rna-DKM08_RS14790;anticodon=(pos:complement(93051..93053));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS14790;product=tRNA-Ile NZ_QFYX01000002.1 RefSeq gene 93146 94060 . - . ID=gene-DKM08_RS14795;Name=DKM08_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14795;old_locus_tag=DKM08_14775 NZ_QFYX01000002.1 Protein Homology CDS 93146 94060 . - 0 ID=cds-WP_010950324.1;Parent=gene-DKM08_RS14795;Dbxref=GenBank:WP_010950324.1;Name=WP_010950324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214521.1;locus_tag=DKM08_RS14795;product=DUF3566 domain-containing protein;protein_id=WP_010950324.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 94156 96672 . - . ID=gene-DKM08_RS14800;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=DKM08_RS14800;old_locus_tag=DKM08_14780 NZ_QFYX01000002.1 Protein Homology CDS 94156 96672 . - 0 ID=cds-WP_010950323.1;Parent=gene-DKM08_RS14800;Dbxref=GenBank:WP_010950323.1;Name=WP_010950323.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214520.1;locus_tag=DKM08_RS14800;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_010950323.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 96707 98734 . - . ID=gene-DKM08_RS14805;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=DKM08_RS14805;old_locus_tag=DKM08_14785 NZ_QFYX01000002.1 Protein Homology CDS 96707 98734 . - 0 ID=cds-WP_031652105.1;Parent=gene-DKM08_RS14805;Dbxref=GenBank:WP_031652105.1;Name=WP_031652105.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214519.2;locus_tag=DKM08_RS14805;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_031652105.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 98977 99540 . - . ID=gene-DKM08_RS14810;Name=DKM08_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14810;old_locus_tag=DKM08_14790 NZ_QFYX01000002.1 Protein Homology CDS 98977 99540 . - 0 ID=cds-WP_003899769.1;Parent=gene-DKM08_RS14810;Dbxref=GenBank:WP_003899769.1;Name=WP_003899769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214518.1;locus_tag=DKM08_RS14810;product=DNA replication protein DciA;protein_id=WP_003899769.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 99537 100694 . - . ID=gene-DKM08_RS14815;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=DKM08_RS14815;old_locus_tag=DKM08_14795 NZ_QFYX01000002.1 Protein Homology CDS 99537 100694 . - 0 ID=cds-WP_003400273.1;Parent=gene-DKM08_RS14815;Dbxref=GenBank:WP_003400273.1;Name=WP_003400273.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214517.1;locus_tag=DKM08_RS14815;product=DNA replication/repair protein RecF;protein_id=WP_003400273.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 100714 101922 . - . ID=gene-DKM08_RS14820;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=DKM08_RS14820;old_locus_tag=DKM08_14800 NZ_QFYX01000002.1 Protein Homology CDS 100714 101922 . - 0 ID=cds-WP_010950321.1;Parent=gene-DKM08_RS14820;Dbxref=GenBank:WP_010950321.1;Name=WP_010950321.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214516.1;locus_tag=DKM08_RS14820;product=DNA polymerase III subunit beta;protein_id=WP_010950321.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 102450 103973 . - . ID=gene-DKM08_RS14825;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=DKM08_RS14825;old_locus_tag=DKM08_14805 NZ_QFYX01000002.1 Protein Homology CDS 102450 103973 . - 0 ID=cds-WP_011799063.1;Parent=gene-DKM08_RS14825;Dbxref=GenBank:WP_011799063.1;Name=WP_011799063.1;Ontology_term=GO:0006275,GO:0003688,GO:0005524,GO:0043565;gbkey=CDS;gene=dnaA;go_function=DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214515.1;locus_tag=DKM08_RS14825;product=chromosomal replication initiator protein DnaA;protein_id=WP_011799063.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 104577 104720 . + . ID=gene-DKM08_RS14835;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=DKM08_RS14835;old_locus_tag=DKM08_14815 NZ_QFYX01000002.1 Protein Homology CDS 104577 104720 . + 0 ID=cds-WP_003400206.1;Parent=gene-DKM08_RS14835;Dbxref=GenBank:WP_003400206.1;Name=WP_003400206.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005263481.1;locus_tag=DKM08_RS14835;product=50S ribosomal protein L34;protein_id=WP_003400206.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 104744 105094 . + . ID=gene-DKM08_RS14840;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=DKM08_RS14840;old_locus_tag=DKM08_14820 NZ_QFYX01000002.1 Protein Homology CDS 104744 105094 . + 0 ID=cds-WP_003899767.1;Parent=gene-DKM08_RS14840;Dbxref=GenBank:WP_003899767.1;Name=WP_003899767.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950319.1;locus_tag=DKM08_RS14840;product=ribonuclease P protein component;protein_id=WP_003899767.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 105091 105453 . + . ID=gene-DKM08_RS14845;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=DKM08_RS14845;old_locus_tag=DKM08_14825 NZ_QFYX01000002.1 Protein Homology CDS 105091 105453 . + 0 ID=cds-WP_003899766.1;Parent=gene-DKM08_RS14845;Dbxref=GenBank:WP_003899766.1;Name=WP_003899766.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218439.1;locus_tag=DKM08_RS14845;product=membrane protein insertion efficiency factor YidD;protein_id=WP_003899766.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 105437 106516 . + . ID=gene-DKM08_RS14850;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=DKM08_RS14850;old_locus_tag=DKM08_14830 NZ_QFYX01000002.1 Protein Homology CDS 105437 106516 . + 0 ID=cds-WP_031355579.1;Parent=gene-DKM08_RS14850;Dbxref=GenBank:WP_031355579.1;Name=WP_031355579.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218438.1;locus_tag=DKM08_RS14850;product=membrane protein insertase YidC;protein_id=WP_031355579.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 106609 107172 . + . ID=gene-DKM08_RS14855;Name=DKM08_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14855;old_locus_tag=DKM08_14835 NZ_QFYX01000002.1 Protein Homology CDS 106609 107172 . + 0 ID=cds-WP_003400186.1;Parent=gene-DKM08_RS14855;Dbxref=GenBank:WP_003400186.1;Name=WP_003400186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218437.1;locus_tag=DKM08_RS14855;product=protein jag;protein_id=WP_003400186.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 107304 107978 . + . ID=gene-DKM08_RS14860;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=DKM08_RS14860;old_locus_tag=DKM08_14840 NZ_QFYX01000002.1 Protein Homology CDS 107304 107978 . + 0 ID=cds-WP_003899763.1;Parent=gene-DKM08_RS14860;Dbxref=GenBank:WP_003899763.1;Name=WP_003899763.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218436.2;locus_tag=DKM08_RS14860;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_003899763.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 107975 109018 . + . ID=gene-DKM08_RS14865;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=DKM08_RS14865;old_locus_tag=DKM08_14845 NZ_QFYX01000002.1 Protein Homology CDS 107975 109018 . + 0 ID=cds-WP_003400180.1;Parent=gene-DKM08_RS14865;Dbxref=GenBank:WP_003400180.1;Name=WP_003400180.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218434.2;locus_tag=DKM08_RS14865;product=chromosome partitioning protein ParA;protein_id=WP_003400180.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 109015 110049 . + . ID=gene-DKM08_RS14870;Name=parB;gbkey=Gene;gene=parB;gene_biotype=protein_coding;locus_tag=DKM08_RS14870;old_locus_tag=DKM08_14850 NZ_QFYX01000002.1 Protein Homology CDS 109015 110049 . + 0 ID=cds-WP_023349647.1;Parent=gene-DKM08_RS14870;Dbxref=GenBank:WP_023349647.1;Name=WP_023349647.1;Ontology_term=GO:0003677;gbkey=CDS;gene=parB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218435.2;locus_tag=DKM08_RS14870;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_023349647.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 110339 111073 . + . ID=gene-DKM08_RS14880;Name=DKM08_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14880;old_locus_tag=DKM08_14860 NZ_QFYX01000002.1 Protein Homology CDS 110339 111073 . + 0 ID=cds-WP_003400171.1;Parent=gene-DKM08_RS14880;Dbxref=GenBank:WP_003400171.1;Name=WP_003400171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218433.1;locus_tag=DKM08_RS14880;product=hypothetical protein;protein_id=WP_003400171.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 111094 112314 . - . ID=gene-DKM08_RS14885;Name=cwlM;gbkey=Gene;gene=cwlM;gene_biotype=protein_coding;locus_tag=DKM08_RS14885;old_locus_tag=DKM08_14865 NZ_QFYX01000002.1 Protein Homology CDS 111094 112314 . - 0 ID=cds-WP_003400168.1;Parent=gene-DKM08_RS14885;Dbxref=GenBank:WP_003400168.1;Name=WP_003400168.1;gbkey=CDS;gene=cwlM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178027.1;locus_tag=DKM08_RS14885;product=N-acetylmuramoyl-L-alanine amidase CwlM;protein_id=WP_003400168.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 112424 112774 . - . ID=gene-DKM08_RS14890;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=DKM08_RS14890;old_locus_tag=DKM08_14870 NZ_QFYX01000002.1 Protein Homology CDS 112424 112774 . - 0 ID=cds-WP_003400164.1;Parent=gene-DKM08_RS14890;Dbxref=GenBank:WP_003400164.1;Name=WP_003400164.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218431.1;locus_tag=DKM08_RS14890;product=thioredoxin;protein_id=WP_003400164.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 112771 113778 . - . ID=gene-DKM08_RS14895;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=DKM08_RS14895;old_locus_tag=DKM08_14875 NZ_QFYX01000002.1 Protein Homology CDS 112771 113778 . - 0 ID=cds-WP_003400151.1;Parent=gene-DKM08_RS14895;Dbxref=GenBank:WP_003400151.1;Name=WP_003400151.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218430.1;locus_tag=DKM08_RS14895;product=thioredoxin-disulfide reductase;protein_id=WP_003400151.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 113872 114636 . - . ID=gene-DKM08_RS14900;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=DKM08_RS14900;old_locus_tag=DKM08_14880 NZ_QFYX01000002.1 Protein Homology CDS 113872 114636 . - 0 ID=cds-WP_003400148.1;Parent=gene-DKM08_RS14900;Dbxref=GenBank:WP_003400148.1;Name=WP_003400148.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218429.1;locus_tag=DKM08_RS14900;product=anti-sigma-M factor RsmA;protein_id=WP_003400148.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 114729 115289 . - . ID=gene-DKM08_RS14905;Name=sigM;gbkey=Gene;gene=sigM;gene_biotype=protein_coding;locus_tag=DKM08_RS14905;old_locus_tag=DKM08_14885 NZ_QFYX01000002.1 Protein Homology CDS 114729 115289 . - 0 ID=cds-WP_003917992.1;Parent=gene-DKM08_RS14905;Dbxref=GenBank:WP_003917992.1;Name=WP_003917992.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigM;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917992.1;locus_tag=DKM08_RS14905;product=RNA polymerase sigma factor SigM;protein_id=WP_003917992.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 115354 118908 . - . ID=gene-DKM08_RS14910;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=DKM08_RS14910;old_locus_tag=DKM08_14890 NZ_QFYX01000002.1 Protein Homology CDS 115354 118908 . - 0 ID=cds-WP_003400134.1;Parent=gene-DKM08_RS14910;Dbxref=GenBank:WP_003400134.1;Name=WP_003400134.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218427.1;locus_tag=DKM08_RS14910;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_003400134.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 118905 121313 . - . ID=gene-DKM08_RS14915;Name=DKM08_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14915;old_locus_tag=DKM08_14895 NZ_QFYX01000002.1 Protein Homology CDS 118905 121313 . - 0 ID=cds-WP_010950965.1;Parent=gene-DKM08_RS14915;Dbxref=GenBank:WP_010950965.1;Name=WP_010950965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218426.1;locus_tag=DKM08_RS14915;product=DUF6049 family protein;protein_id=WP_010950965.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 121310 122056 . - . ID=gene-DKM08_RS14920;Name=DKM08_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14920;old_locus_tag=DKM08_14900 NZ_QFYX01000002.1 Protein Homology CDS 121310 122056 . - 0 ID=cds-WP_003400124.1;Parent=gene-DKM08_RS14920;Dbxref=GenBank:WP_003400124.1;Name=WP_003400124.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218425.1;locus_tag=DKM08_RS14920;product=NUDIX hydrolase;protein_id=WP_003400124.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 122432 123874 . + . ID=gene-DKM08_RS14930;Name=pcnA;gbkey=Gene;gene=pcnA;gene_biotype=protein_coding;locus_tag=DKM08_RS14930;old_locus_tag=DKM08_14910 NZ_QFYX01000002.1 Protein Homology CDS 122432 123874 . + 0 ID=cds-WP_003400120.1;Parent=gene-DKM08_RS14930;Dbxref=GenBank:WP_003400120.1;Name=WP_003400120.1;Ontology_term=GO:0006396,GO:0003723,GO:0016779;gbkey=CDS;gene=pcnA;go_function=RNA binding|0003723||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178026.1;locus_tag=DKM08_RS14930;product=CCA tRNA nucleotidyltransferase;protein_id=WP_003400120.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 123899 124408 . + . ID=gene-DKM08_RS14935;Name=DKM08_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14935;old_locus_tag=DKM08_14915 NZ_QFYX01000002.1 Protein Homology CDS 123899 124408 . + 0 ID=cds-WP_099179252.1;Parent=gene-DKM08_RS14935;Dbxref=GenBank:WP_099179252.1;Name=WP_099179252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218423.1;locus_tag=DKM08_RS14935;product=pullulanase;protein_id=WP_099179252.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 124474 124785 . + . ID=gene-DKM08_RS21695;Name=esxF;gbkey=Gene;gene=esxF;gene_biotype=pseudogene;locus_tag=DKM08_RS21695;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 124474 124785 . + 0 ID=cds-DKM08_RS21695;Parent=gene-DKM08_RS21695;Note=internal stop;gbkey=CDS;gene=esxF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218422.1;locus_tag=DKM08_RS21695;product=pore-forming CpnT exporter EsxF;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 124796 125068 . + . ID=gene-DKM08_RS14945;Name=esxE;gbkey=Gene;gene=esxE;gene_biotype=protein_coding;locus_tag=DKM08_RS14945;old_locus_tag=DKM08_14925 NZ_QFYX01000002.1 Protein Homology CDS 124796 125068 . + 0 ID=cds-WP_010950963.1;Parent=gene-DKM08_RS14945;Dbxref=GenBank:WP_010950963.1;Name=WP_010950963.1;gbkey=CDS;gene=esxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400094.1;locus_tag=DKM08_RS14945;product=pore-forming CpnT exporter EsxE;protein_id=WP_010950963.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 125073 127613 . + . ID=gene-DKM08_RS14950;Name=cpnT;gbkey=Gene;gene=cpnT;gene_biotype=protein_coding;locus_tag=DKM08_RS14950;old_locus_tag=DKM08_14930 NZ_QFYX01000002.1 Protein Homology CDS 125073 127613 . + 0 ID=cds-WP_003899759.1;Parent=gene-DKM08_RS14950;Dbxref=GenBank:WP_003899759.1;Name=WP_003899759.1;gbkey=CDS;gene=cpnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218420.1;locus_tag=DKM08_RS14950;product=outer membrane channel protein/necrotizing toxin glycohydrolase CpnT;protein_id=WP_003899759.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 127610 128140 . + . ID=gene-DKM08_RS14955;Name=ift;gbkey=Gene;gene=ift;gene_biotype=protein_coding;locus_tag=DKM08_RS14955;old_locus_tag=DKM08_14935 NZ_QFYX01000002.1 Protein Homology CDS 127610 128140 . + 0 ID=cds-WP_003400086.1;Parent=gene-DKM08_RS14955;Dbxref=GenBank:WP_003400086.1;Name=WP_003400086.1;gbkey=CDS;gene=ift;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218419.1;locus_tag=DKM08_RS14955;product=necrotizing toxin immunity factor IFT;protein_id=WP_003400086.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 128518 128703 . - . ID=gene-DKM08_RS21700;Name=DKM08_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21700 NZ_QFYX01000002.1 Protein Homology CDS 128518 128703 . - 0 ID=cds-WP_003899758.1;Parent=gene-DKM08_RS21700;Dbxref=GenBank:WP_003899758.1;Name=WP_003899758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899758.1;locus_tag=DKM08_RS21700;product=hypothetical protein;protein_id=WP_003899758.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 128691 129140 . + . ID=gene-DKM08_RS14960;Name=DKM08_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS14960;old_locus_tag=DKM08_14940 NZ_QFYX01000002.1 Protein Homology CDS 128691 129140 . + 0 ID=cds-WP_010950962.1;Parent=gene-DKM08_RS14960;Dbxref=GenBank:WP_010950962.1;Name=WP_010950962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218418.1;locus_tag=DKM08_RS14960;product=hypothetical protein;protein_id=WP_010950962.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 129197 130132 . + . ID=gene-DKM08_RS22215;Name=DKM08_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22215;old_locus_tag=DKM08_14945 NZ_QFYX01000002.1 Protein Homology CDS 129197 130132 . + 0 ID=cds-WP_003400075.1;Parent=gene-DKM08_RS22215;Dbxref=GenBank:WP_003400075.1;Name=WP_003400075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218417.1;locus_tag=DKM08_RS22215;product=hypothetical protein;protein_id=WP_003400075.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 130608 131357 . + . ID=gene-DKM08_RS22220;Name=DKM08_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22220 NZ_QFYX01000002.1 Protein Homology CDS 130608 131357 . + 0 ID=cds-WP_003913539.1;Parent=gene-DKM08_RS22220;Dbxref=GenBank:WP_003913539.1;Name=WP_003913539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037368.6;locus_tag=DKM08_RS22220;product=DUF5631 domain-containing protein;protein_id=WP_003913539.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 131488 134203 . - . ID=gene-DKM08_RS14980;Name=eccC2;gbkey=Gene;gene=eccC2;gene_biotype=pseudogene;locus_tag=DKM08_RS14980;old_locus_tag=DKM08_14960;partial=true;pseudo=true;start_range=.,131488 NZ_QFYX01000002.1 Protein Homology CDS 131488 134203 . - 0 ID=cds-DKM08_RS14980;Parent=gene-DKM08_RS14980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=eccC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218411.1;locus_tag=DKM08_RS14980;partial=true;product=type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2;pseudo=true;start_range=.,131488;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 134204 135691 . - . ID=gene-DKM08_RS14985;Name=eccB2;gbkey=Gene;gene=eccB2;gene_biotype=protein_coding;locus_tag=DKM08_RS14985;old_locus_tag=DKM08_14965 NZ_QFYX01000002.1 Protein Homology CDS 134204 135691 . - 0 ID=cds-WP_010950960.1;Parent=gene-DKM08_RS14985;Dbxref=GenBank:WP_010950960.1;Name=WP_010950960.1;gbkey=CDS;gene=eccB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218412.1;locus_tag=DKM08_RS14985;product=type VII secretion system ESX-2 subunit EccB2;protein_id=WP_010950960.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 135694 136601 . - . ID=gene-DKM08_RS14990;Name=DKM08_RS14990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS14990;old_locus_tag=DKM08_14970;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 135694 136601 . - 0 ID=cds-DKM08_RS14990;Parent=gene-DKM08_RS14990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218413.1;locus_tag=DKM08_RS14990;product=transglycosylase;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 137411 137620 . - . ID=gene-DKM08_RS22225;Name=DKM08_RS22225;end_range=137620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22225;old_locus_tag=DKM08_14980;partial=true;pseudo=true;start_range=.,137411 NZ_QFYX01000002.1 Protein Homology CDS 137411 137620 . - 0 ID=cds-DKM08_RS22225;Parent=gene-DKM08_RS22225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=137620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218415.1;locus_tag=DKM08_RS22225;partial=true;product=hypothetical protein;pseudo=true;start_range=.,137411;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 137645 137770 . + . ID=gene-DKM08_RS22230;Name=DKM08_RS22230;end_range=137770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22230;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 137645 137770 . + 0 ID=cds-DKM08_RS22230;Parent=gene-DKM08_RS22230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=137770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218415.1;locus_tag=DKM08_RS22230;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 137771 138244 . + . ID=gene-DKM08_RS15005;Name=DKM08_RS15005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15005;old_locus_tag=DKM08_14985;partial=true;pseudo=true;start_range=.,137771 NZ_QFYX01000002.1 Protein Homology CDS 137771 138244 . + 0 ID=cds-DKM08_RS15005;Parent=gene-DKM08_RS15005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218411.1;locus_tag=DKM08_RS15005;partial=true;product=type VII secretion protein EccC;pseudo=true;start_range=.,137771;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 138511 138744 . + . ID=gene-DKM08_RS15010;Name=DKM08_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15010;old_locus_tag=DKM08_14990 NZ_QFYX01000002.1 Protein Homology CDS 138511 138744 . + 0 ID=cds-WP_003400047.1;Parent=gene-DKM08_RS15010;Dbxref=GenBank:WP_003400047.1;Name=WP_003400047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178025.1;locus_tag=DKM08_RS15010;product=PE domain-containing protein;protein_id=WP_003400047.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 138823 140022 . + . ID=gene-DKM08_RS15015;Name=DKM08_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15015;old_locus_tag=DKM08_14995 NZ_QFYX01000002.1 Protein Homology CDS 138823 140022 . + 0 ID=cds-WP_003899752.1;Parent=gene-DKM08_RS15015;Dbxref=GenBank:WP_003899752.1;Name=WP_003899752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178024.1;locus_tag=DKM08_RS15015;product=PPE family protein;protein_id=WP_003899752.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 140133 140456 . + . ID=gene-DKM08_RS15020;Name=esxD;gbkey=Gene;gene=esxD;gene_biotype=protein_coding;locus_tag=DKM08_RS15020;old_locus_tag=DKM08_15000 NZ_QFYX01000002.1 Protein Homology CDS 140133 140456 . + 0 ID=cds-WP_003400035.1;Parent=gene-DKM08_RS15020;Dbxref=GenBank:WP_003400035.1;Name=WP_003400035.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxD;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218408.1;locus_tag=DKM08_RS15020;product=WXG100 family type VII secretion target;protein_id=WP_003400035.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 140492 140778 . + . ID=gene-DKM08_RS15025;Name=esxC;gbkey=Gene;gene=esxC;gene_biotype=pseudogene;locus_tag=DKM08_RS15025;old_locus_tag=DKM08_15005;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 140492 140778 . + 0 ID=cds-DKM08_RS15025;Parent=gene-DKM08_RS15025;Note=frameshifted;Ontology_term=GO:0005576;gbkey=CDS;gene=esxC;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218407.1;locus_tag=DKM08_RS15025;product=WXG100 family type VII secretion target;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 140874 141077 . + . ID=gene-DKM08_RS22780;Name=DKM08_RS22780;end_range=141077,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22780;old_locus_tag=DKM08_15010;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 140874 141077 . + 0 ID=cds-DKM08_RS22780;Parent=gene-DKM08_RS22780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=141077,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218406.1;locus_tag=DKM08_RS22780;partial=true;product=ESX secretion-associated protein EspG;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 141077 141943 . + . ID=gene-DKM08_RS15035;Name=eccD2;gbkey=Gene;gene=eccD2;gene_biotype=pseudogene;locus_tag=DKM08_RS15035;old_locus_tag=DKM08_15015;partial=true;pseudo=true;start_range=.,141077 NZ_QFYX01000002.1 Protein Homology CDS 141077 141943 . + 0 ID=cds-DKM08_RS15035;Parent=gene-DKM08_RS15035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=eccD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218404.1;locus_tag=DKM08_RS15035;partial=true;product=type VII secretion system ESX-2 subunit EccD2;pseudo=true;start_range=.,141077;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 141928 143580 . + . ID=gene-DKM08_RS15040;Name=mycP2;gbkey=Gene;gene=mycP2;gene_biotype=protein_coding;locus_tag=DKM08_RS15040;old_locus_tag=DKM08_15020 NZ_QFYX01000002.1 Protein Homology CDS 141928 143580 . + 0 ID=cds-WP_003400012.1;Parent=gene-DKM08_RS15040;Dbxref=GenBank:WP_003400012.1;Name=WP_003400012.1;gbkey=CDS;gene=mycP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218403.1;locus_tag=DKM08_RS15040;product=type VII secretion system ESX-2 serine protease mycosin MycP2;protein_id=WP_003400012.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 143577 145190 . + . ID=gene-DKM08_RS15045;Name=eccE2;gbkey=Gene;gene=eccE2;gene_biotype=protein_coding;locus_tag=DKM08_RS15045;old_locus_tag=DKM08_15025 NZ_QFYX01000002.1 Protein Homology CDS 143577 145190 . + 0 ID=cds-WP_010950955.1;Parent=gene-DKM08_RS15045;Dbxref=GenBank:WP_010950955.1;Name=WP_010950955.1;gbkey=CDS;gene=eccE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218402.1;locus_tag=DKM08_RS15045;product=type VII secretion system ESX-2 subunit EccE2;protein_id=WP_010950955.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 145260 147119 . + . ID=gene-DKM08_RS15050;Name=eccA2;gbkey=Gene;gene=eccA2;gene_biotype=protein_coding;locus_tag=DKM08_RS15050;old_locus_tag=DKM08_15030 NZ_QFYX01000002.1 Protein Homology CDS 145260 147119 . + 0 ID=cds-WP_003400005.1;Parent=gene-DKM08_RS15050;Dbxref=GenBank:WP_003400005.1;Name=WP_003400005.1;gbkey=CDS;gene=eccA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218401.1;locus_tag=DKM08_RS15050;product=type VII secretion system ESX-2 AAA family ATPase EccA2;protein_id=WP_003400005.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 147341 148681 . + . ID=gene-DKM08_RS15055;Name=mycP1;gbkey=Gene;gene=mycP1;gene_biotype=protein_coding;locus_tag=DKM08_RS15055;old_locus_tag=DKM08_15035 NZ_QFYX01000002.1 Protein Homology CDS 147341 148681 . + 0 ID=cds-WP_010950954.1;Parent=gene-DKM08_RS15055;Dbxref=GenBank:WP_010950954.1;Name=WP_010950954.1;gbkey=CDS;gene=mycP1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218400.1;locus_tag=DKM08_RS15055;product=type VII secretion system ESX-1 serine protease mycosin MycP1;protein_id=WP_010950954.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 148678 150066 . + . ID=gene-DKM08_RS15060;Name=eccE1;gbkey=Gene;gene=eccE1;gene_biotype=protein_coding;locus_tag=DKM08_RS15060;old_locus_tag=DKM08_15040 NZ_QFYX01000002.1 Protein Homology CDS 148678 150066 . + 0 ID=cds-WP_003400000.1;Parent=gene-DKM08_RS15060;Dbxref=GenBank:WP_003400000.1;Name=WP_003400000.1;gbkey=CDS;gene=eccE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218399.1;locus_tag=DKM08_RS15060;product=type VII secretion system ESX-1 subunit EccE1;protein_id=WP_003400000.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 150173 151555 . + . ID=gene-DKM08_RS15065;Name=espB;gbkey=Gene;gene=espB;gene_biotype=protein_coding;locus_tag=DKM08_RS15065;old_locus_tag=DKM08_15045 NZ_QFYX01000002.1 Protein Homology CDS 150173 151555 . + 0 ID=cds-WP_010950953.1;Parent=gene-DKM08_RS15065;Dbxref=GenBank:WP_010950953.1;Name=WP_010950953.1;gbkey=CDS;gene=espB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218398.1;locus_tag=DKM08_RS15065;product=type VII secretion system ESX-1 target EspB;protein_id=WP_010950953.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 151552 151899 . + . ID=gene-DKM08_RS15070;Name=espL;gbkey=Gene;gene=espL;gene_biotype=protein_coding;locus_tag=DKM08_RS15070;old_locus_tag=DKM08_15050 NZ_QFYX01000002.1 Protein Homology CDS 151552 151899 . + 0 ID=cds-WP_003399988.1;Parent=gene-DKM08_RS15070;Dbxref=GenBank:WP_003399988.1;Name=WP_003399988.1;gbkey=CDS;gene=espL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218397.1;locus_tag=DKM08_RS15070;product=type VII secretion system ESX-1 associated protein EspL;protein_id=WP_003399988.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 152316 154551 . + . ID=gene-DKM08_RS15075;Name=espK;gbkey=Gene;gene=espK;gene_biotype=pseudogene;locus_tag=DKM08_RS15075;old_locus_tag=DKM08_15055;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 152316 154551 . + 0 ID=cds-DKM08_RS15075;Parent=gene-DKM08_RS15075;Note=frameshifted;gbkey=CDS;gene=espK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015304039.1;locus_tag=DKM08_RS15075;product=type VII secretion system ESX-1 associated protein EspK;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 154609 155451 . - . ID=gene-DKM08_RS15080;Name=espJ;gbkey=Gene;gene=espJ;gene_biotype=protein_coding;locus_tag=DKM08_RS15080;old_locus_tag=DKM08_15060 NZ_QFYX01000002.1 Protein Homology CDS 154609 155451 . - 0 ID=cds-WP_010950951.1;Parent=gene-DKM08_RS15080;Dbxref=GenBank:WP_010950951.1;Name=WP_010950951.1;gbkey=CDS;gene=espJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218395.1;locus_tag=DKM08_RS15080;product=type VII secretion system ESX-1 associated protein EspJ;protein_id=WP_010950951.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 155602 157137 . - . ID=gene-DKM08_RS15085;Name=eccD1;gbkey=Gene;gene=eccD1;gene_biotype=protein_coding;locus_tag=DKM08_RS15085;old_locus_tag=DKM08_15065 NZ_QFYX01000002.1 Protein Homology CDS 155602 157137 . - 0 ID=cds-WP_003399976.1;Parent=gene-DKM08_RS15085;Dbxref=GenBank:WP_003399976.1;Name=WP_003399976.1;gbkey=CDS;gene=eccD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218394.1;locus_tag=DKM08_RS15085;product=type VII secretion system ESX-1 subunit EccD1;protein_id=WP_003399976.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 157134 159134 . - . ID=gene-DKM08_RS15090;Name=espI;gbkey=Gene;gene=espI;gene_biotype=protein_coding;locus_tag=DKM08_RS15090;old_locus_tag=DKM08_15070 NZ_QFYX01000002.1 Protein Homology CDS 157134 159134 . - 0 ID=cds-WP_003909105.1;Parent=gene-DKM08_RS15090;Dbxref=GenBank:WP_003909105.1;Name=WP_003909105.1;gbkey=CDS;gene=espI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218393.1;locus_tag=DKM08_RS15090;product=type VII secretion system ESX-1 associated protein EspI;protein_id=WP_003909105.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 159248 159535 . - . ID=gene-DKM08_RS15095;Name=esxA;gbkey=Gene;gene=esxA;gene_biotype=protein_coding;locus_tag=DKM08_RS15095;old_locus_tag=DKM08_15075 NZ_QFYX01000002.1 Protein Homology CDS 159248 159535 . - 0 ID=cds-WP_003399963.1;Parent=gene-DKM08_RS15095;Dbxref=GenBank:WP_003399963.1;Name=WP_003399963.1;gbkey=CDS;gene=esxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178023.1;locus_tag=DKM08_RS15095;product=type VII secretion system ESX-1 WXG100 family target ESAT-6;protein_id=WP_003399963.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 159568 159870 . - . ID=gene-DKM08_RS15100;Name=esxB;gbkey=Gene;gene=esxB;gene_biotype=protein_coding;locus_tag=DKM08_RS15100;old_locus_tag=DKM08_15080 NZ_QFYX01000002.1 Protein Homology CDS 159568 159870 . - 0 ID=cds-WP_003399940.1;Parent=gene-DKM08_RS15100;Dbxref=GenBank:WP_003399940.1;Name=WP_003399940.1;gbkey=CDS;gene=esxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218391.1;locus_tag=DKM08_RS15100;product=type VII secretion system ESX-1 WXG100 family target CFP-10;protein_id=WP_003399940.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 159963 161069 . - . ID=gene-DKM08_RS15105;Name=DKM08_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15105;old_locus_tag=DKM08_15085 NZ_QFYX01000002.1 Protein Homology CDS 159963 161069 . - 0 ID=cds-WP_003399879.1;Parent=gene-DKM08_RS15105;Dbxref=GenBank:WP_003399879.1;Name=WP_003399879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178022.1;locus_tag=DKM08_RS15105;product=type VII secretion system ESX-1 target PPE68;protein_id=WP_003399879.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 161103 161399 . - . ID=gene-DKM08_RS15110;Name=DKM08_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15110;old_locus_tag=DKM08_15090 NZ_QFYX01000002.1 Protein Homology CDS 161103 161399 . - 0 ID=cds-WP_003399870.1;Parent=gene-DKM08_RS15110;Dbxref=GenBank:WP_003399870.1;Name=WP_003399870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288658.1;locus_tag=DKM08_RS15110;product=type VII secretion system ESX-1 target PE35;protein_id=WP_003399870.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 161542 163317 . - . ID=gene-DKM08_RS15115;Name=eccCb1;gbkey=Gene;gene=eccCb1;gene_biotype=protein_coding;locus_tag=DKM08_RS15115;old_locus_tag=DKM08_15095 NZ_QFYX01000002.1 Protein Homology CDS 161542 163317 . - 0 ID=cds-WP_003399865.1;Parent=gene-DKM08_RS15115;Dbxref=GenBank:WP_003399865.1;Name=WP_003399865.1;gbkey=CDS;gene=eccCb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218388.1;locus_tag=DKM08_RS15115;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1;protein_id=WP_003399865.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 163331 163404 . - . ID=gene-DKM08_RS22785;Name=DKM08_RS22785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22785;partial=true;pseudo=true;start_range=.,163331 NZ_QFYX01000002.1 Protein Homology CDS 163331 163404 . - 0 ID=cds-DKM08_RS22785;Parent=gene-DKM08_RS22785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=DKM08_RS22785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,163331;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 163420 165663 . - . ID=gene-DKM08_RS15125;Name=eccCa1;gbkey=Gene;gene=eccCa1;gene_biotype=protein_coding;locus_tag=DKM08_RS15125;old_locus_tag=DKM08_15105 NZ_QFYX01000002.1 Protein Homology CDS 163420 165663 . - 0 ID=cds-WP_003899738.1;Parent=gene-DKM08_RS15125;Dbxref=GenBank:WP_003899738.1;Name=WP_003899738.1;gbkey=CDS;gene=eccCa1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218387.1;locus_tag=DKM08_RS15125;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1;protein_id=WP_003899738.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 165663 167105 . - . ID=gene-DKM08_RS15130;Name=eccB1;gbkey=Gene;gene=eccB1;gene_biotype=protein_coding;locus_tag=DKM08_RS15130;old_locus_tag=DKM08_15110 NZ_QFYX01000002.1 Protein Homology CDS 165663 167105 . - 0 ID=cds-WP_003399854.1;Parent=gene-DKM08_RS15130;Dbxref=GenBank:WP_003399854.1;Name=WP_003399854.1;gbkey=CDS;gene=eccB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218386.1;locus_tag=DKM08_RS15130;product=type VII secretion system ESX-1 subunit EccB1;protein_id=WP_003399854.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 167109 168830 . - . ID=gene-DKM08_RS15135;Name=eccA1;gbkey=Gene;gene=eccA1;gene_biotype=protein_coding;locus_tag=DKM08_RS15135;old_locus_tag=DKM08_15115 NZ_QFYX01000002.1 Protein Homology CDS 167109 168830 . - 0 ID=cds-WP_010950950.1;Parent=gene-DKM08_RS15135;Dbxref=GenBank:WP_010950950.1;Name=WP_010950950.1;gbkey=CDS;gene=eccA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218385.1;locus_tag=DKM08_RS15135;product=type VII secretion system ESX-1 AAA family ATPase EccA1;protein_id=WP_010950950.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 168823 169374 . - . ID=gene-DKM08_RS15140;Name=espH;gbkey=Gene;gene=espH;gene_biotype=protein_coding;locus_tag=DKM08_RS15140;old_locus_tag=DKM08_15120 NZ_QFYX01000002.1 Protein Homology CDS 168823 169374 . - 0 ID=cds-WP_003399844.1;Parent=gene-DKM08_RS15140;Dbxref=GenBank:WP_003399844.1;Name=WP_003399844.1;gbkey=CDS;gene=espH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218384.1;locus_tag=DKM08_RS15140;product=type VII secretion system ESX-1 associated protein EspH;protein_id=WP_003399844.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 169413 170264 . - . ID=gene-DKM08_RS15145;Name=espG1;gbkey=Gene;gene=espG1;gene_biotype=protein_coding;locus_tag=DKM08_RS15145;old_locus_tag=DKM08_15125 NZ_QFYX01000002.1 Protein Homology CDS 169413 170264 . - 0 ID=cds-WP_003399839.1;Parent=gene-DKM08_RS15145;Dbxref=GenBank:WP_003399839.1;Name=WP_003399839.1;gbkey=CDS;gene=espG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218383.1;locus_tag=DKM08_RS15145;product=type VII secretion system ESX-1 adaptor EspG1;protein_id=WP_003399839.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 170267 170578 . - . ID=gene-DKM08_RS15150;Name=espF;gbkey=Gene;gene=espF;gene_biotype=protein_coding;locus_tag=DKM08_RS15150;old_locus_tag=DKM08_15130 NZ_QFYX01000002.1 Protein Homology CDS 170267 170578 . - 0 ID=cds-WP_003899737.1;Parent=gene-DKM08_RS15150;Dbxref=GenBank:WP_003899737.1;Name=WP_003899737.1;gbkey=CDS;gene=espF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218382.1;locus_tag=DKM08_RS15150;product=type VII secretion system ESX-1 associated protein EspF;protein_id=WP_003899737.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 170666 171922 . - . ID=gene-DKM08_RS15155;Name=espE;gbkey=Gene;gene=espE;gene_biotype=protein_coding;locus_tag=DKM08_RS15155;old_locus_tag=DKM08_15135 NZ_QFYX01000002.1 Protein Homology CDS 170666 171922 . - 0 ID=cds-WP_003399828.1;Parent=gene-DKM08_RS15155;Dbxref=GenBank:WP_003399828.1;Name=WP_003399828.1;gbkey=CDS;gene=espE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218381.1;locus_tag=DKM08_RS15155;product=type VII secretion system ESX-1 associated protein EspE;protein_id=WP_003399828.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 172165 173277 . - . ID=gene-DKM08_RS15160;Name=DKM08_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15160;old_locus_tag=DKM08_15140 NZ_QFYX01000002.1 Protein Homology CDS 172165 173277 . - 0 ID=cds-WP_015288657.1;Parent=gene-DKM08_RS15160;Dbxref=GenBank:WP_015288657.1;Name=WP_015288657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291786.1;locus_tag=DKM08_RS15160;product=FHA domain-containing protein;protein_id=WP_015288657.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 173670 174020 . + . ID=gene-DKM08_RS15165;Name=whiB6;gbkey=Gene;gene=whiB6;gene_biotype=protein_coding;locus_tag=DKM08_RS15165;old_locus_tag=DKM08_15145 NZ_QFYX01000002.1 Protein Homology CDS 173670 174020 . + 0 ID=cds-WP_003899734.1;Parent=gene-DKM08_RS15165;Dbxref=GenBank:WP_003899734.1;Name=WP_003899734.1;gbkey=CDS;gene=whiB6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899734.1;locus_tag=DKM08_RS15165;product=transcriptional regulator WhiB6;protein_id=WP_003899734.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 173919 174245 . - . ID=gene-DKM08_RS15170;Name=DKM08_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15170;old_locus_tag=DKM08_15150 NZ_QFYX01000002.1 Protein Homology CDS 173919 174245 . - 0 ID=cds-WP_003902567.1;Parent=gene-DKM08_RS15170;Dbxref=GenBank:WP_003902567.1;Name=WP_003902567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218378.1;locus_tag=DKM08_RS15170;product=hypothetical protein;protein_id=WP_003902567.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 174242 175414 . - . ID=gene-DKM08_RS15175;Name=DKM08_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15175;old_locus_tag=DKM08_15155 NZ_QFYX01000002.1 Protein Homology CDS 174242 175414 . - 0 ID=cds-WP_010950949.1;Parent=gene-DKM08_RS15175;Dbxref=GenBank:WP_010950949.1;Name=WP_010950949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218377.1;locus_tag=DKM08_RS15175;product=MinD/ParA family ATP-binding protein;protein_id=WP_010950949.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 176110 180693 . + . ID=gene-DKM08_RS15185;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=DKM08_RS15185;old_locus_tag=DKM08_15165 NZ_QFYX01000002.1 Protein Homology CDS 176110 180693 . + 0 ID=cds-WP_003399810.1;Parent=gene-DKM08_RS15185;Dbxref=GenBank:WP_003399810.1;Name=WP_003399810.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218376.1;locus_tag=DKM08_RS15185;product=glutamate synthase large subunit;protein_id=WP_003399810.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 180686 182152 . + . ID=gene-DKM08_RS15190;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=DKM08_RS15190;old_locus_tag=DKM08_15170 NZ_QFYX01000002.1 Protein Homology CDS 180686 182152 . + 0 ID=cds-WP_003399804.1;Parent=gene-DKM08_RS15190;Dbxref=GenBank:WP_003399804.1;Name=WP_003399804.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218375.1;locus_tag=DKM08_RS15190;product=glutamate synthase subunit beta;protein_id=WP_003399804.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 182577 182774 . + . ID=gene-DKM08_RS15195;Name=DKM08_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15195;old_locus_tag=DKM08_15175 NZ_QFYX01000002.1 GeneMarkS-2+ CDS 182577 182774 . + 0 ID=cds-WP_003399803.1;Parent=gene-DKM08_RS15195;Dbxref=GenBank:WP_003399803.1;Name=WP_003399803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS15195;product=hypothetical protein;protein_id=WP_003399803.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 182783 183790 . + . ID=gene-DKM08_RS15200;Name=DKM08_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15200;old_locus_tag=DKM08_15180 NZ_QFYX01000002.1 Protein Homology CDS 182783 183790 . + 0 ID=cds-WP_003399801.1;Parent=gene-DKM08_RS15200;Dbxref=GenBank:WP_003399801.1;Name=WP_003399801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218373.1;locus_tag=DKM08_RS15200;product=PHP domain-containing protein;protein_id=WP_003399801.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 183992 184642 . - . ID=gene-DKM08_RS15205;Name=ethR;gbkey=Gene;gene=ethR;gene_biotype=protein_coding;locus_tag=DKM08_RS15205;old_locus_tag=DKM08_15185 NZ_QFYX01000002.1 Protein Homology CDS 183992 184642 . - 0 ID=cds-WP_003399797.1;Parent=gene-DKM08_RS15205;Dbxref=GenBank:WP_003399797.1;Name=WP_003399797.1;gbkey=CDS;gene=ethR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218372.1;locus_tag=DKM08_RS15205;product=HTH-type transcriptional regulator EthR;protein_id=WP_003399797.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 184718 186187 . + . ID=gene-DKM08_RS15210;Name=ethA;gbkey=Gene;gene=ethA;gene_biotype=protein_coding;locus_tag=DKM08_RS15210;old_locus_tag=DKM08_15190 NZ_QFYX01000002.1 Protein Homology CDS 184718 186187 . + 0 ID=cds-WP_023349643.1;Parent=gene-DKM08_RS15210;Dbxref=GenBank:WP_023349643.1;Name=WP_023349643.1;gbkey=CDS;gene=ethA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218371.1;locus_tag=DKM08_RS15210;product=FAD-containing monooxygenase EthA;protein_id=WP_023349643.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 186223 186696 . - . ID=gene-DKM08_RS15215;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=DKM08_RS15215;old_locus_tag=DKM08_15195 NZ_QFYX01000002.1 Protein Homology CDS 186223 186696 . - 0 ID=cds-WP_003399786.1;Parent=gene-DKM08_RS15215;Dbxref=GenBank:WP_003399786.1;Name=WP_003399786.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218370.1;locus_tag=DKM08_RS15215;product=ribonuclease E activity regulator RraA;protein_id=WP_003399786.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 186713 187117 . - . ID=gene-DKM08_RS15220;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=DKM08_RS15220;old_locus_tag=DKM08_15200 NZ_QFYX01000002.1 Protein Homology CDS 186713 187117 . - 0 ID=cds-WP_003399779.1;Parent=gene-DKM08_RS15220;Dbxref=GenBank:WP_003399779.1;Name=WP_003399779.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218369.1;locus_tag=DKM08_RS15220;product=histone-like protein Hns;protein_id=WP_003399779.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 187224 187508 . - . ID=gene-DKM08_RS15225;Name=DKM08_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15225;old_locus_tag=DKM08_15205 NZ_QFYX01000002.1 Protein Homology CDS 187224 187508 . - 0 ID=cds-WP_003399775.1;Parent=gene-DKM08_RS15225;Dbxref=GenBank:WP_003399775.1;Name=WP_003399775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218368.1;locus_tag=DKM08_RS15225;product=hypothetical protein;protein_id=WP_003399775.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 187520 188176 . - . ID=gene-DKM08_RS15230;Name=DKM08_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15230;old_locus_tag=DKM08_15210 NZ_QFYX01000002.1 Protein Homology CDS 187520 188176 . - 0 ID=cds-WP_003399771.1;Parent=gene-DKM08_RS15230;Dbxref=GenBank:WP_003399771.1;Name=WP_003399771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218367.1;locus_tag=DKM08_RS15230;product=DUF6474 family protein;protein_id=WP_003399771.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 188294 188692 . - . ID=gene-DKM08_RS15235;Name=espR;gbkey=Gene;gene=espR;gene_biotype=protein_coding;locus_tag=DKM08_RS15235;old_locus_tag=DKM08_15215 NZ_QFYX01000002.1 Protein Homology CDS 188294 188692 . - 0 ID=cds-WP_003399759.1;Parent=gene-DKM08_RS15235;Dbxref=GenBank:WP_003399759.1;Name=WP_003399759.1;gbkey=CDS;gene=espR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218366.1;locus_tag=DKM08_RS15235;product=type VII secretion system ESX-1 transcriptional regulator EspR;protein_id=WP_003399759.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 188957 189865 . - . ID=gene-DKM08_RS15240;Name=DKM08_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15240;old_locus_tag=DKM08_15220 NZ_QFYX01000002.1 Protein Homology CDS 188957 189865 . - 0 ID=cds-WP_010950948.1;Parent=gene-DKM08_RS15240;Dbxref=GenBank:WP_010950948.1;Name=WP_010950948.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218365.1;locus_tag=DKM08_RS15240;product=TMEM165/GDT1 family protein;protein_id=WP_010950948.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 190120 190653 . - . ID=gene-DKM08_RS15250;Name=DKM08_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15250;old_locus_tag=DKM08_15230 NZ_QFYX01000002.1 Protein Homology CDS 190120 190653 . - 0 ID=cds-WP_003899730.1;Parent=gene-DKM08_RS15250;Dbxref=GenBank:WP_003899730.1;Name=WP_003899730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218364.1;locus_tag=DKM08_RS15250;product=hypothetical protein;protein_id=WP_003899730.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 190864 191487 . - . ID=gene-DKM08_RS15255;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=DKM08_RS15255;old_locus_tag=DKM08_15235 NZ_QFYX01000002.1 Protein Homology CDS 190864 191487 . - 0 ID=cds-WP_010950947.1;Parent=gene-DKM08_RS15255;Dbxref=GenBank:WP_010950947.1;Name=WP_010950947.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218363.1;locus_tag=DKM08_RS15255;product=superoxide dismutase;protein_id=WP_010950947.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 191773 191937 . + . ID=gene-DKM08_RS21710;Name=DKM08_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21710 NZ_QFYX01000002.1 Protein Homology CDS 191773 191937 . + 0 ID=cds-WP_003399671.1;Parent=gene-DKM08_RS21710;Dbxref=GenBank:WP_003399671.1;Name=WP_003399671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003399671.1;locus_tag=DKM08_RS21710;product=hypothetical protein;protein_id=WP_003399671.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 192551 192910 . - . ID=gene-DKM08_RS15270;Name=DKM08_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15270;old_locus_tag=DKM08_15250 NZ_QFYX01000002.1 Protein Homology CDS 192551 192910 . - 0 ID=cds-WP_003900767.1;Parent=gene-DKM08_RS15270;Dbxref=GenBank:WP_003900767.1;Name=WP_003900767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=DKM08_RS15270;product=hypothetical protein;protein_id=WP_003900767.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 192925 193416 . - . ID=gene-DKM08_RS15275;Name=DKM08_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15275;old_locus_tag=DKM08_15255 NZ_QFYX01000002.1 Protein Homology CDS 192925 193416 . - 0 ID=cds-WP_003422266.1;Parent=gene-DKM08_RS15275;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.6;locus_tag=DKM08_RS15275;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 193884 194121 . - . ID=gene-DKM08_RS22240;Name=DKM08_RS22240;end_range=194121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22240;partial=true;pseudo=true;start_range=.,193884 NZ_QFYX01000002.1 Protein Homology CDS 193884 194121 . - 0 ID=cds-DKM08_RS22240;Parent=gene-DKM08_RS22240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=194121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=DKM08_RS22240;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,193884;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 194906 195055 . - . ID=gene-DKM08_RS21715;Name=DKM08_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21715 NZ_QFYX01000002.1 Protein Homology CDS 194906 195055 . - 0 ID=cds-WP_003420934.1;Parent=gene-DKM08_RS21715;Dbxref=GenBank:WP_003420934.1;Name=WP_003420934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420934.1;locus_tag=DKM08_RS21715;product=hypothetical protein;protein_id=WP_003420934.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 195594 196622 . + . ID=gene-DKM08_RS15295;Name=DKM08_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15295;old_locus_tag=DKM08_15275 NZ_QFYX01000002.1 Protein Homology CDS 195594 196622 . + 0 ID=cds-WP_031355578.1;Parent=gene-DKM08_RS15295;Dbxref=GenBank:WP_031355578.1;Name=WP_031355578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218360.1;locus_tag=DKM08_RS15295;product=DUF4328 domain-containing protein;protein_id=WP_031355578.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 196628 197452 . + . ID=gene-DKM08_RS15300;Name=DKM08_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15300;old_locus_tag=DKM08_15280 NZ_QFYX01000002.1 Protein Homology CDS 196628 197452 . + 0 ID=cds-WP_003420924.1;Parent=gene-DKM08_RS15300;Dbxref=GenBank:WP_003420924.1;Name=WP_003420924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218359.1;locus_tag=DKM08_RS15300;product=glycerophosphodiester phosphodiesterase;protein_id=WP_003420924.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 197467 198012 . - . ID=gene-DKM08_RS15305;Name=bfrB;gbkey=Gene;gene=bfrB;gene_biotype=protein_coding;locus_tag=DKM08_RS15305;old_locus_tag=DKM08_15285 NZ_QFYX01000002.1 Protein Homology CDS 197467 198012 . - 0 ID=cds-WP_003420920.1;Parent=gene-DKM08_RS15305;Dbxref=GenBank:WP_003420920.1;Name=WP_003420920.1;gbkey=CDS;gene=bfrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218358.1;locus_tag=DKM08_RS15305;product=ferritin BfrB;protein_id=WP_003420920.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 198258 198578 . - . ID=gene-DKM08_RS15310;Name=DKM08_RS15310;end_range=198578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15310;old_locus_tag=DKM08_15290;partial=true;pseudo=true;start_range=.,198258 NZ_QFYX01000002.1 Protein Homology CDS 198258 198578 . - 0 ID=cds-DKM08_RS15310;Parent=gene-DKM08_RS15310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0070726;end_range=198578,.;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011562413.1;locus_tag=DKM08_RS15310;partial=true;product=LCP family protein;pseudo=true;start_range=.,198258;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 198649 199425 . - . ID=gene-DKM08_RS15315;Name=DKM08_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15315;old_locus_tag=DKM08_15295 NZ_QFYX01000002.1 Protein Homology CDS 198649 199425 . - 0 ID=cds-WP_003420910.1;Parent=gene-DKM08_RS15315;Dbxref=GenBank:WP_003420910.1;Name=WP_003420910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218356.1;locus_tag=DKM08_RS15315;product=DUF2470 domain-containing protein;protein_id=WP_003420910.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 199521 200486 . + . ID=gene-DKM08_RS15320;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=DKM08_RS15320;old_locus_tag=DKM08_15300 NZ_QFYX01000002.1 Protein Homology CDS 199521 200486 . + 0 ID=cds-WP_003420906.1;Parent=gene-DKM08_RS15320;Dbxref=GenBank:WP_003420906.1;Name=WP_003420906.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218355.1;locus_tag=DKM08_RS15320;product=prephenate dehydratase;protein_id=WP_003420906.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 200483 201181 . + . ID=gene-DKM08_RS15325;Name=DKM08_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15325;old_locus_tag=DKM08_15305 NZ_QFYX01000002.1 Protein Homology CDS 200483 201181 . + 0 ID=cds-WP_003899720.1;Parent=gene-DKM08_RS15325;Dbxref=GenBank:WP_003899720.1;Name=WP_003899720.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218354.1;locus_tag=DKM08_RS15325;product=histidine phosphatase family protein;protein_id=WP_003899720.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 201158 201379 . - . ID=gene-DKM08_RS15330;Name=DKM08_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15330;old_locus_tag=DKM08_15310 NZ_QFYX01000002.1 Protein Homology CDS 201158 201379 . - 0 ID=cds-WP_071854239.1;Parent=gene-DKM08_RS15330;Dbxref=GenBank:WP_071854239.1;Name=WP_071854239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912385.1;locus_tag=DKM08_RS15330;product=hypothetical protein;protein_id=WP_071854239.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 201376 201790 . - . ID=gene-DKM08_RS15335;Name=DKM08_RS15335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15335;old_locus_tag=DKM08_15315;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 201376 201790 . - 0 ID=cds-DKM08_RS15335;Parent=gene-DKM08_RS15335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218353.1;locus_tag=DKM08_RS15335;product=metallopeptidase family protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 201795 203144 . - . ID=gene-DKM08_RS15340;Name=DKM08_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15340;old_locus_tag=DKM08_15320 NZ_QFYX01000002.1 Protein Homology CDS 201795 203144 . - 0 ID=cds-WP_003420892.1;Parent=gene-DKM08_RS15340;Dbxref=GenBank:WP_003420892.1;Name=WP_003420892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218352.1;locus_tag=DKM08_RS15340;product=septum formation family protein;protein_id=WP_003420892.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 203277 204536 . + . ID=gene-DKM08_RS15345;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=DKM08_RS15345;old_locus_tag=DKM08_15325 NZ_QFYX01000002.1 Protein Homology CDS 203277 204536 . + 0 ID=cds-WP_003420889.1;Parent=gene-DKM08_RS15345;Dbxref=GenBank:WP_003420889.1;Name=WP_003420889.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218351.1;locus_tag=DKM08_RS15345;product=serine--tRNA ligase;protein_id=WP_003420889.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 204533 205324 . - . ID=gene-DKM08_RS15350;Name=DKM08_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15350;old_locus_tag=DKM08_15330 NZ_QFYX01000002.1 Protein Homology CDS 204533 205324 . - 0 ID=cds-WP_003420884.1;Parent=gene-DKM08_RS15350;Dbxref=GenBank:WP_003420884.1;Name=WP_003420884.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218350.1;locus_tag=DKM08_RS15350;product=AraC family transcriptional regulator;protein_id=WP_003420884.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 205380 205955 . + . ID=gene-DKM08_RS15355;Name=DKM08_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15355;old_locus_tag=DKM08_15335 NZ_QFYX01000002.1 Protein Homology CDS 205380 205955 . + 0 ID=cds-WP_003420880.1;Parent=gene-DKM08_RS15355;Dbxref=GenBank:WP_003420880.1;Name=WP_003420880.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218349.1;locus_tag=DKM08_RS15355;product=class I SAM-dependent methyltransferase;protein_id=WP_003420880.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 205952 206434 . - . ID=gene-DKM08_RS15360;Name=DKM08_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15360;old_locus_tag=DKM08_15340 NZ_QFYX01000002.1 Protein Homology CDS 205952 206434 . - 0 ID=cds-WP_003420879.1;Parent=gene-DKM08_RS15360;Dbxref=GenBank:WP_003420879.1;Name=WP_003420879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218348.1;locus_tag=DKM08_RS15360;product=DUF2834 domain-containing protein;protein_id=WP_003420879.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 206506 207135 . + . ID=gene-DKM08_RS15365;Name=DKM08_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15365;old_locus_tag=DKM08_15345 NZ_QFYX01000002.1 Protein Homology CDS 206506 207135 . + 0 ID=cds-WP_003899717.1;Parent=gene-DKM08_RS15365;Dbxref=GenBank:WP_003899717.1;Name=WP_003899717.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218347.1;locus_tag=DKM08_RS15365;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899717.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 207183 208793 . + . ID=gene-DKM08_RS15370;Name=DKM08_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15370;old_locus_tag=DKM08_15350 NZ_QFYX01000002.1 Protein Homology CDS 207183 208793 . + 0 ID=cds-WP_010950946.1;Parent=gene-DKM08_RS15370;Dbxref=GenBank:WP_010950946.1;Name=WP_010950946.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218346.1;locus_tag=DKM08_RS15370;product=phytoene desaturase family protein;protein_id=WP_010950946.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 208824 209405 . + . ID=gene-DKM08_RS15375;Name=DKM08_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15375;old_locus_tag=DKM08_15355 NZ_QFYX01000002.1 Protein Homology CDS 208824 209405 . + 0 ID=cds-WP_003420870.1;Parent=gene-DKM08_RS15375;Dbxref=GenBank:WP_003420870.1;Name=WP_003420870.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=DKM08_RS15375;product=IS607-like element IS1537 family transposase;protein_id=WP_003420870.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 209405 210621 . + . ID=gene-DKM08_RS15380;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=DKM08_RS15380;old_locus_tag=DKM08_15360;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 209405 210621 . + 0 ID=cds-DKM08_RS15380;Parent=gene-DKM08_RS15380;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=DKM08_RS15380;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 210625 212379 . - . ID=gene-DKM08_RS15385;Name=fadD23;gbkey=Gene;gene=fadD23;gene_biotype=protein_coding;locus_tag=DKM08_RS15385;old_locus_tag=DKM08_15365 NZ_QFYX01000002.1 Protein Homology CDS 210625 212379 . - 0 ID=cds-WP_003899713.1;Parent=gene-DKM08_RS15385;Dbxref=GenBank:WP_003899713.1;Name=WP_003899713.1;gbkey=CDS;gene=fadD23;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218343.1;locus_tag=DKM08_RS15385;product=long-chain-fatty-acid--CoA ligase FadD23;protein_id=WP_003899713.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 212586 218966 . + . ID=gene-DKM08_RS15395;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=DKM08_RS15395;old_locus_tag=DKM08_15375 NZ_QFYX01000002.1 Protein Homology CDS 212586 218966 . + 0 ID=cds-WP_003900763.1;Parent=gene-DKM08_RS15395;Dbxref=GenBank:WP_003900763.1;Name=WP_003900763.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218342.1;locus_tag=DKM08_RS15395;product=phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003900763.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 219017 220552 . + . ID=gene-DKM08_RS15400;Name=papA1;gbkey=Gene;gene=papA1;gene_biotype=protein_coding;locus_tag=DKM08_RS15400;old_locus_tag=DKM08_15380 NZ_QFYX01000002.1 Protein Homology CDS 219017 220552 . + 0 ID=cds-WP_003899711.1;Parent=gene-DKM08_RS15400;Dbxref=GenBank:WP_003899711.1;Name=WP_003899711.1;gbkey=CDS;gene=papA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218341.1;locus_tag=DKM08_RS15400;product=acyltransferase PapA1;protein_id=WP_003899711.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 220662 223931 . + . ID=gene-DKM08_RS15405;Name=mmpL8;gbkey=Gene;gene=mmpL8;gene_biotype=protein_coding;locus_tag=DKM08_RS15405;old_locus_tag=DKM08_15385 NZ_QFYX01000002.1 Protein Homology CDS 220662 223931 . + 0 ID=cds-WP_003908351.1;Parent=gene-DKM08_RS15405;Dbxref=GenBank:WP_003908351.1;Name=WP_003908351.1;gbkey=CDS;gene=mmpL8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218340.1;locus_tag=DKM08_RS15405;product=sulfolipid-1 RND transporter MmpL8;protein_id=WP_003908351.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 224256 225470 . - . ID=gene-DKM08_RS15410;Name=chp1;gbkey=Gene;gene=chp1;gene_biotype=protein_coding;locus_tag=DKM08_RS15410;old_locus_tag=DKM08_15390 NZ_QFYX01000002.1 Protein Homology CDS 224256 225470 . - 0 ID=cds-WP_010950945.1;Parent=gene-DKM08_RS15410;Dbxref=GenBank:WP_010950945.1;Name=WP_010950945.1;gbkey=CDS;gene=chp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218339.1;locus_tag=DKM08_RS15410;product=sulfolipid-1 biosynthesis membrane-anchored acyltransferase Chp1;protein_id=WP_010950945.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 225505 226218 . - . ID=gene-DKM08_RS15415;Name=sap;gbkey=Gene;gene=sap;gene_biotype=protein_coding;locus_tag=DKM08_RS15415;old_locus_tag=DKM08_15395 NZ_QFYX01000002.1 Protein Homology CDS 225505 226218 . - 0 ID=cds-WP_010950944.1;Parent=gene-DKM08_RS15415;Dbxref=GenBank:WP_010950944.1;Name=WP_010950944.1;gbkey=CDS;gene=sap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218338.1;locus_tag=DKM08_RS15415;product=sulfolipid-1 biosynthesis transporter Sap;protein_id=WP_010950944.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 226366 227772 . + . ID=gene-DKM08_RS15420;Name=papA2;gbkey=Gene;gene=papA2;gene_biotype=protein_coding;locus_tag=DKM08_RS15420;old_locus_tag=DKM08_15400 NZ_QFYX01000002.1 Protein Homology CDS 226366 227772 . + 0 ID=cds-WP_010950943.1;Parent=gene-DKM08_RS15420;Dbxref=GenBank:WP_010950943.1;Name=WP_010950943.1;gbkey=CDS;gene=papA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178020.1;locus_tag=DKM08_RS15420;product=trehalose-2-sulfate acyltransferase;protein_id=WP_010950943.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 227860 228195 . - . ID=gene-DKM08_RS15425;Name=DKM08_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15425;old_locus_tag=DKM08_15405 NZ_QFYX01000002.1 Protein Homology CDS 227860 228195 . - 0 ID=cds-WP_003420840.1;Parent=gene-DKM08_RS15425;Dbxref=GenBank:WP_003420840.1;Name=WP_003420840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218336.1;locus_tag=DKM08_RS15425;product=hypothetical protein;protein_id=WP_003420840.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 228192 229742 . - . ID=gene-DKM08_RS15430;Name=DKM08_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15430;old_locus_tag=DKM08_15410 NZ_QFYX01000002.1 Protein Homology CDS 228192 229742 . - 0 ID=cds-WP_003420837.1;Parent=gene-DKM08_RS15430;Dbxref=GenBank:WP_003420837.1;Name=WP_003420837.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218335.1;locus_tag=DKM08_RS15430;product=MBL fold metallo-hydrolase;protein_id=WP_003420837.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 229789 230544 . - . ID=gene-DKM08_RS15435;Name=DKM08_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15435;old_locus_tag=DKM08_15415 NZ_QFYX01000002.1 Protein Homology CDS 229789 230544 . - 0 ID=cds-WP_003420830.1;Parent=gene-DKM08_RS15435;Dbxref=GenBank:WP_003420830.1;Name=WP_003420830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218334.1;locus_tag=DKM08_RS15435;product=aminoglycoside 3'-phosphotransferase;protein_id=WP_003420830.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 230620 231399 . + . ID=gene-DKM08_RS15440;Name=DKM08_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15440;old_locus_tag=DKM08_15420 NZ_QFYX01000002.1 Protein Homology CDS 230620 231399 . + 0 ID=cds-WP_003420827.1;Parent=gene-DKM08_RS15440;Dbxref=GenBank:WP_003420827.1;Name=WP_003420827.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218333.1;locus_tag=DKM08_RS15440;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420827.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 231403 232158 . + . ID=gene-DKM08_RS15445;Name=DKM08_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15445;old_locus_tag=DKM08_15425 NZ_QFYX01000002.1 Protein Homology CDS 231403 232158 . + 0 ID=cds-WP_003420824.1;Parent=gene-DKM08_RS15445;Dbxref=GenBank:WP_003420824.1;Name=WP_003420824.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218332.1;locus_tag=DKM08_RS15445;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420824.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 232176 232961 . + . ID=gene-DKM08_RS15450;Name=DKM08_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15450;old_locus_tag=DKM08_15430 NZ_QFYX01000002.1 Protein Homology CDS 232176 232961 . + 0 ID=cds-WP_003420820.1;Parent=gene-DKM08_RS15450;Dbxref=GenBank:WP_003420820.1;Name=WP_003420820.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218331.1;locus_tag=DKM08_RS15450;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420820.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 232976 233797 . + . ID=gene-DKM08_RS15455;Name=DKM08_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15455;old_locus_tag=DKM08_15435 NZ_QFYX01000002.1 Protein Homology CDS 232976 233797 . + 0 ID=cds-WP_010950942.1;Parent=gene-DKM08_RS15455;Dbxref=GenBank:WP_010950942.1;Name=WP_010950942.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218330.1;locus_tag=DKM08_RS15455;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_010950942.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 233957 234109 . + . ID=gene-DKM08_RS15465;Name=DKM08_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15465;old_locus_tag=DKM08_15445 NZ_QFYX01000002.1 Protein Homology CDS 233957 234109 . + 0 ID=cds-WP_003420812.1;Parent=gene-DKM08_RS15465;Dbxref=GenBank:WP_003420812.1;Name=WP_003420812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420812.1;locus_tag=DKM08_RS15465;product=hypothetical protein;protein_id=WP_003420812.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 234106 235620 . - . ID=gene-DKM08_RS15470;Name=DKM08_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15470;old_locus_tag=DKM08_15450 NZ_QFYX01000002.1 Protein Homology CDS 234106 235620 . - 0 ID=cds-WP_003420809.1;Parent=gene-DKM08_RS15470;Dbxref=GenBank:WP_003420809.1;Name=WP_003420809.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178019.1;locus_tag=DKM08_RS15470;product=PE family protein;protein_id=WP_003420809.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 235774 237435 . - . ID=gene-DKM08_RS15475;Name=DKM08_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15475;old_locus_tag=DKM08_15455 NZ_QFYX01000002.1 Protein Homology CDS 235774 237435 . - 0 ID=cds-WP_003912357.1;Parent=gene-DKM08_RS15475;Dbxref=GenBank:WP_003912357.1;Name=WP_003912357.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912357.1;locus_tag=DKM08_RS15475;product=LGFP repeat-containing protein;protein_id=WP_003912357.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 237598 238452 . - . ID=gene-DKM08_RS15480;Name=pirG;gbkey=Gene;gene=pirG;gene_biotype=protein_coding;locus_tag=DKM08_RS15480;old_locus_tag=DKM08_15460 NZ_QFYX01000002.1 Protein Homology CDS 237598 238452 . - 0 ID=cds-WP_003420801.1;Parent=gene-DKM08_RS15480;Dbxref=GenBank:WP_003420801.1;Name=WP_003420801.1;gbkey=CDS;gene=pirG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218327.1;locus_tag=DKM08_RS15480;product=exported repetitive protein;protein_id=WP_003420801.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 238716 239915 . + . ID=gene-DKM08_RS15485;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=DKM08_RS15485;old_locus_tag=DKM08_15465 NZ_QFYX01000002.1 Protein Homology CDS 238716 239915 . + 0 ID=cds-WP_003420798.1;Parent=gene-DKM08_RS15485;Dbxref=GenBank:WP_003420798.1;Name=WP_003420798.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218326.1;locus_tag=DKM08_RS15485;product=UDP-galactopyranose mutase;protein_id=WP_003420798.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 239912 241825 . + . ID=gene-DKM08_RS15490;Name=glfT2;gbkey=Gene;gene=glfT2;gene_biotype=protein_coding;locus_tag=DKM08_RS15490;old_locus_tag=DKM08_15470 NZ_QFYX01000002.1 Protein Homology CDS 239912 241825 . + 0 ID=cds-WP_003900761.1;Parent=gene-DKM08_RS15490;Dbxref=GenBank:WP_003900761.1;Name=WP_003900761.1;gbkey=CDS;gene=glfT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218325.1;locus_tag=DKM08_RS15490;product=galactofuranosyl transferase GlfT2;protein_id=WP_003900761.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 241818 242351 . + . ID=gene-DKM08_RS15495;Name=DKM08_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15495;old_locus_tag=DKM08_15475 NZ_QFYX01000002.1 Protein Homology CDS 241818 242351 . + 0 ID=cds-WP_003899705.1;Parent=gene-DKM08_RS15495;Dbxref=GenBank:WP_003899705.1;Name=WP_003899705.1;Ontology_term=GO:0008610,GO:0046839,GO:0042577;gbkey=CDS;go_function=lipid phosphatase activity|0042577||IEA;go_process=lipid biosynthetic process|0008610||IEA,phospholipid dephosphorylation|0046839||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899705.1;locus_tag=DKM08_RS15495;product=phosphatase PAP2 family protein;protein_id=WP_003899705.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 242358 243266 . + . ID=gene-DKM08_RS15500;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=DKM08_RS15500;old_locus_tag=DKM08_15480 NZ_QFYX01000002.1 Protein Homology CDS 242358 243266 . + 0 ID=cds-WP_003420788.1;Parent=gene-DKM08_RS15500;Dbxref=GenBank:WP_003420788.1;Name=WP_003420788.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218323.1;locus_tag=DKM08_RS15500;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=WP_003420788.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 243241 245238 . + . ID=gene-DKM08_RS15505;Name=aftB;gbkey=Gene;gene=aftB;gene_biotype=protein_coding;locus_tag=DKM08_RS15505;old_locus_tag=DKM08_15485 NZ_QFYX01000002.1 Protein Homology CDS 243241 245238 . + 0 ID=cds-WP_031703441.1;Parent=gene-DKM08_RS15505;Dbxref=GenBank:WP_031703441.1;Name=WP_031703441.1;gbkey=CDS;gene=aftB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936680.1;locus_tag=DKM08_RS15505;product=terminal beta-(1->2)-arabinofuranosyltransferase;protein_id=WP_031703441.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 245533 246549 . + . ID=gene-DKM08_RS15510;Name=ag85A;gbkey=Gene;gene=ag85A;gene_biotype=protein_coding;gene_synonym=fbpA;locus_tag=DKM08_RS15510;old_locus_tag=DKM08_15490 NZ_QFYX01000002.1 Protein Homology CDS 245533 246549 . + 0 ID=cds-WP_003900759.1;Parent=gene-DKM08_RS15510;Dbxref=GenBank:WP_003900759.1;Name=WP_003900759.1;gbkey=CDS;gene=ag85A;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218321.1;locus_tag=DKM08_RS15510;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=WP_003900759.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 246729 247628 . + . ID=gene-DKM08_RS15515;Name=fbpD;gbkey=Gene;gene=fbpD;gene_biotype=protein_coding;locus_tag=DKM08_RS15515;old_locus_tag=DKM08_15495 NZ_QFYX01000002.1 Protein Homology CDS 246729 247628 . + 0 ID=cds-WP_003420783.1;Parent=gene-DKM08_RS15515;Dbxref=GenBank:WP_003420783.1;Name=WP_003420783.1;Ontology_term=GO:0016787;gbkey=CDS;gene=fbpD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178017.1;locus_tag=DKM08_RS15515;product=esterase family protein;protein_id=WP_003420783.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 247826 248836 . + . ID=gene-DKM08_RS15520;Name=DKM08_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15520;old_locus_tag=DKM08_15500 NZ_QFYX01000002.1 Protein Homology CDS 247826 248836 . + 0 ID=cds-WP_023349640.1;Parent=gene-DKM08_RS15520;Dbxref=GenBank:WP_023349640.1;Name=WP_023349640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218319.1;locus_tag=DKM08_RS15520;product=phospholipase;protein_id=WP_023349640.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 249149 251038 . + . ID=gene-DKM08_RS15525;Name=fadD32;gbkey=Gene;gene=fadD32;gene_biotype=protein_coding;locus_tag=DKM08_RS15525;old_locus_tag=DKM08_15505 NZ_QFYX01000002.1 Protein Homology CDS 249149 251038 . + 0 ID=cds-WP_017351216.1;Parent=gene-DKM08_RS15525;Dbxref=GenBank:WP_017351216.1;Name=WP_017351216.1;gbkey=CDS;gene=fadD32;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912356.1;locus_tag=DKM08_RS15525;product=long-chain-fatty-acid--AMP ligase FadD32;protein_id=WP_017351216.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 251045 256246 . + . ID=gene-DKM08_RS15530;Name=pks13;gbkey=Gene;gene=pks13;gene_biotype=protein_coding;locus_tag=DKM08_RS15530;old_locus_tag=DKM08_15510 NZ_QFYX01000002.1 Protein Homology CDS 251045 256246 . + 0 ID=cds-WP_003420774.1;Parent=gene-DKM08_RS15530;Dbxref=GenBank:WP_003420774.1;Name=WP_003420774.1;gbkey=CDS;gene=pks13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218317.1;locus_tag=DKM08_RS15530;product=polyketide synthase Pks13;protein_id=WP_003420774.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 256243 257811 . + . ID=gene-DKM08_RS15535;Name=DKM08_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15535;old_locus_tag=DKM08_15515 NZ_QFYX01000002.1 Protein Homology CDS 256243 257811 . + 0 ID=cds-WP_003420767.1;Parent=gene-DKM08_RS15535;Dbxref=GenBank:WP_003420767.1;Name=WP_003420767.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218316.2;locus_tag=DKM08_RS15535;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003420767.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 257853 259176 . - . ID=gene-DKM08_RS15540;Name=DKM08_RS15540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15540;old_locus_tag=DKM08_15520;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 257853 259176 . - 0 ID=cds-DKM08_RS15540;Parent=gene-DKM08_RS15540;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=DKM08_RS15540;product=ISL3-like element IS1557 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 259303 261084 . - . ID=gene-DKM08_RS15545;Name=DKM08_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15545;old_locus_tag=DKM08_15525 NZ_QFYX01000002.1 Protein Homology CDS 259303 261084 . - 0 ID=cds-WP_003900757.1;Parent=gene-DKM08_RS15545;Dbxref=GenBank:WP_003900757.1;Name=WP_003900757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218314.1;locus_tag=DKM08_RS15545;product=DNA alkylation response protein;protein_id=WP_003900757.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 261164 262291 . - . ID=gene-DKM08_RS15550;Name=DKM08_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15550;old_locus_tag=DKM08_15530 NZ_QFYX01000002.1 Protein Homology CDS 261164 262291 . - 0 ID=cds-WP_010950940.1;Parent=gene-DKM08_RS15550;Dbxref=GenBank:WP_010950940.1;Name=WP_010950940.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178016.1;locus_tag=DKM08_RS15550;product=MBL fold metallo-hydrolase;protein_id=WP_010950940.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 262359 265655 . - . ID=gene-DKM08_RS15555;Name=embB;gbkey=Gene;gene=embB;gene_biotype=protein_coding;locus_tag=DKM08_RS15555;old_locus_tag=DKM08_15535 NZ_QFYX01000002.1 Protein Homology CDS 262359 265655 . - 0 ID=cds-WP_010950939.1;Parent=gene-DKM08_RS15555;Dbxref=GenBank:WP_010950939.1;Name=WP_010950939.1;gbkey=CDS;gene=embB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218312.1;locus_tag=DKM08_RS15555;product=arabinosyltransferase EmbB;protein_id=WP_010950939.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 265652 268936 . - . ID=gene-DKM08_RS15560;Name=embA;gbkey=Gene;gene=embA;gene_biotype=protein_coding;locus_tag=DKM08_RS15560;old_locus_tag=DKM08_15540 NZ_QFYX01000002.1 Protein Homology CDS 265652 268936 . - 0 ID=cds-WP_003899696.1;Parent=gene-DKM08_RS15560;Dbxref=GenBank:WP_003899696.1;Name=WP_003899696.1;gbkey=CDS;gene=embA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218311.1;locus_tag=DKM08_RS15560;product=arabinosyltransferase EmbA;protein_id=WP_003899696.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 269022 272306 . - . ID=gene-DKM08_RS15565;Name=embC;gbkey=Gene;gene=embC;gene_biotype=protein_coding;locus_tag=DKM08_RS15565;old_locus_tag=DKM08_15545 NZ_QFYX01000002.1 Protein Homology CDS 269022 272306 . - 0 ID=cds-WP_023349639.1;Parent=gene-DKM08_RS15565;Dbxref=GenBank:WP_023349639.1;Name=WP_023349639.1;gbkey=CDS;gene=embC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218310.1;locus_tag=DKM08_RS15565;product=arabinosyltransferase EmbC;protein_id=WP_023349639.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 272306 274237 . - . ID=gene-DKM08_RS15570;Name=aftA;gbkey=Gene;gene=aftA;gene_biotype=protein_coding;locus_tag=DKM08_RS15570;old_locus_tag=DKM08_15550 NZ_QFYX01000002.1 Protein Homology CDS 272306 274237 . - 0 ID=cds-WP_003899694.1;Parent=gene-DKM08_RS15570;Dbxref=GenBank:WP_003899694.1;Name=WP_003899694.1;gbkey=CDS;gene=aftA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218309.1;locus_tag=DKM08_RS15570;product=galactan 5-O-arabinofuranosyltransferase;protein_id=WP_003899694.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 274240 275004 . - . ID=gene-DKM08_RS15575;Name=DKM08_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15575;old_locus_tag=DKM08_15555 NZ_QFYX01000002.1 Protein Homology CDS 274240 275004 . - 0 ID=cds-WP_003420632.1;Parent=gene-DKM08_RS15575;Dbxref=GenBank:WP_003420632.1;Name=WP_003420632.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420632.1;locus_tag=DKM08_RS15575;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;protein_id=WP_003420632.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 275005 276390 . - . ID=gene-DKM08_RS15580;Name=dprE1;gbkey=Gene;gene=dprE1;gene_biotype=protein_coding;locus_tag=DKM08_RS15580;old_locus_tag=DKM08_15560 NZ_QFYX01000002.1 Protein Homology CDS 275005 276390 . - 0 ID=cds-WP_003420630.1;Parent=gene-DKM08_RS15580;Dbxref=GenBank:WP_003420630.1;Name=WP_003420630.1;gbkey=CDS;gene=dprE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218307.1;locus_tag=DKM08_RS15580;product=decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1;protein_id=WP_003420630.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 276430 276795 . - . ID=gene-DKM08_RS15585;Name=DKM08_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15585;old_locus_tag=DKM08_15565 NZ_QFYX01000002.1 Protein Homology CDS 276430 276795 . - 0 ID=cds-WP_003420627.1;Parent=gene-DKM08_RS15585;Dbxref=GenBank:WP_003420627.1;Name=WP_003420627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218306.1;locus_tag=DKM08_RS15585;product=arabinogalactan biosynthesis protein;protein_id=WP_003420627.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 276904 277389 . - . ID=gene-DKM08_RS15590;Name=DKM08_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15590;old_locus_tag=DKM08_15570 NZ_QFYX01000002.1 Protein Homology CDS 276904 277389 . - 0 ID=cds-WP_003420624.1;Parent=gene-DKM08_RS15590;Dbxref=GenBank:WP_003420624.1;Name=WP_003420624.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218305.1;locus_tag=DKM08_RS15590;product=GreA/GreB family elongation factor;protein_id=WP_003420624.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 277633 278559 . + . ID=gene-DKM08_RS15595;Name=DKM08_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15595;old_locus_tag=DKM08_15575 NZ_QFYX01000002.1 Protein Homology CDS 277633 278559 . + 0 ID=cds-WP_003420620.1;Parent=gene-DKM08_RS15595;Dbxref=GenBank:WP_003420620.1;Name=WP_003420620.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218304.1;locus_tag=DKM08_RS15595;product=SAM-dependent methyltransferase;protein_id=WP_003420620.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 278572 279795 . + . ID=gene-DKM08_RS15600;Name=DKM08_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15600;old_locus_tag=DKM08_15580 NZ_QFYX01000002.1 Protein Homology CDS 278572 279795 . + 0 ID=cds-WP_003420618.1;Parent=gene-DKM08_RS15600;Dbxref=GenBank:WP_003420618.1;Name=WP_003420618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218303.1;locus_tag=DKM08_RS15600;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_003420618.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 279776 280849 . - . ID=gene-DKM08_RS15605;Name=DKM08_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15605;old_locus_tag=DKM08_15585 NZ_QFYX01000002.1 Protein Homology CDS 279776 280849 . - 0 ID=cds-WP_031355576.1;Parent=gene-DKM08_RS15605;Dbxref=GenBank:WP_031355576.1;Name=WP_031355576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218302.1;locus_tag=DKM08_RS15605;product=hypothetical protein;protein_id=WP_031355576.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 280933 281913 . - . ID=gene-DKM08_RS15610;Name=DKM08_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15610;old_locus_tag=DKM08_15590 NZ_QFYX01000002.1 Protein Homology CDS 280933 281913 . - 0 ID=cds-WP_003420612.1;Parent=gene-DKM08_RS15610;Dbxref=GenBank:WP_003420612.1;Name=WP_003420612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178015.1;locus_tag=DKM08_RS15610;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003420612.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 282069 282911 . - . ID=gene-DKM08_RS15615;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=DKM08_RS15615;old_locus_tag=DKM08_15595 NZ_QFYX01000002.1 Protein Homology CDS 282069 282911 . - 0 ID=cds-WP_023349637.1;Parent=gene-DKM08_RS15615;Dbxref=GenBank:WP_023349637.1;Name=WP_023349637.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=rfbD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218300.1;locus_tag=DKM08_RS15615;product=ABC transporter permease;protein_id=WP_023349637.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 282908 283822 . - . ID=gene-DKM08_RS15620;Name=glfT1;gbkey=Gene;gene=glfT1;gene_biotype=protein_coding;locus_tag=DKM08_RS15620;old_locus_tag=DKM08_15600 NZ_QFYX01000002.1 Protein Homology CDS 282908 283822 . - 0 ID=cds-WP_003420606.1;Parent=gene-DKM08_RS15620;Dbxref=GenBank:WP_003420606.1;Name=WP_003420606.1;gbkey=CDS;gene=glfT1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=DKM08_RS15620;product=galactofuranosyl transferase GlfT1;protein_id=WP_003420606.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 283819 284640 . - . ID=gene-DKM08_RS15625;Name=rfbE;gbkey=Gene;gene=rfbE;gene_biotype=protein_coding;locus_tag=DKM08_RS15625;old_locus_tag=DKM08_15605 NZ_QFYX01000002.1 Protein Homology CDS 283819 284640 . - 0 ID=cds-WP_003420603.1;Parent=gene-DKM08_RS15625;Dbxref=GenBank:WP_003420603.1;Name=WP_003420603.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=rfbE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218298.1;locus_tag=DKM08_RS15625;product=ABC transporter ATP-binding protein;protein_id=WP_003420603.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 284644 285180 . - . ID=gene-DKM08_RS15630;Name=bpa;gbkey=Gene;gene=bpa;gene_biotype=protein_coding;locus_tag=DKM08_RS15630;old_locus_tag=DKM08_15610 NZ_QFYX01000002.1 Protein Homology CDS 284644 285180 . - 0 ID=cds-WP_003899690.1;Parent=gene-DKM08_RS15630;Dbxref=GenBank:WP_003899690.1;Name=WP_003899690.1;gbkey=CDS;gene=bpa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218297.1;locus_tag=DKM08_RS15630;product=proteasome activator protein Bpa;protein_id=WP_003899690.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 285184 287184 . - . ID=gene-DKM08_RS15635;Name=DKM08_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15635;old_locus_tag=DKM08_15615 NZ_QFYX01000002.1 Protein Homology CDS 285184 287184 . - 0 ID=cds-WP_003420597.1;Parent=gene-DKM08_RS15635;Dbxref=GenBank:WP_003420597.1;Name=WP_003420597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218296.1;locus_tag=DKM08_RS15635;product=DUF6541 family protein;protein_id=WP_003420597.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 287274 288470 . + . ID=gene-DKM08_RS15640;Name=DKM08_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15640;old_locus_tag=DKM08_15620 NZ_QFYX01000002.1 Protein Homology CDS 287274 288470 . + 0 ID=cds-WP_003420595.1;Parent=gene-DKM08_RS15640;Dbxref=GenBank:WP_003420595.1;Name=WP_003420595.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218295.1;locus_tag=DKM08_RS15640;product=cysteine desulfurase-like protein;protein_id=WP_003420595.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 288489 289466 . - . ID=gene-DKM08_RS15645;Name=DKM08_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15645;old_locus_tag=DKM08_15625 NZ_QFYX01000002.1 Protein Homology CDS 288489 289466 . - 0 ID=cds-WP_003917958.1;Parent=gene-DKM08_RS15645;Dbxref=GenBank:WP_003917958.1;Name=WP_003917958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917958.1;locus_tag=DKM08_RS15645;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_003917958.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 289502 289588 . + . ID=gene-DKM08_RS15650;Name=DKM08_RS15650;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS15650;old_locus_tag=DKM08_15630 NZ_QFYX01000002.1 tRNAscan-SE tRNA 289502 289588 . + . ID=rna-DKM08_RS15650;Parent=gene-DKM08_RS15650;anticodon=(pos:289536..289538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15650;product=tRNA-Ser NZ_QFYX01000002.1 tRNAscan-SE exon 289502 289588 . + . ID=exon-DKM08_RS15650-1;Parent=rna-DKM08_RS15650;anticodon=(pos:289536..289538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15650;product=tRNA-Ser NZ_QFYX01000002.1 RefSeq pseudogene 290076 291149 . - . ID=gene-DKM08_RS15655;Name=DKM08_RS15655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15655;old_locus_tag=DKM08_15635;partial=true;pseudo=true;start_range=.,290076 NZ_QFYX01000002.1 Protein Homology CDS 290076 291149 . - 0 ID=cds-DKM08_RS15655;Parent=gene-DKM08_RS15655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=DKM08_RS15655;partial=true;product=DUF222 domain-containing protein;pseudo=true;start_range=.,290076;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 291237 292484 . - . ID=gene-DKM08_RS15660;Name=lipE;gbkey=Gene;gene=lipE;gene_biotype=protein_coding;locus_tag=DKM08_RS15660;old_locus_tag=DKM08_15640 NZ_QFYX01000002.1 Protein Homology CDS 291237 292484 . - 0 ID=cds-WP_003420590.1;Parent=gene-DKM08_RS15660;Dbxref=GenBank:WP_003420590.1;Name=WP_003420590.1;gbkey=CDS;gene=lipE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218292.1;locus_tag=DKM08_RS15660;product=lipase LipE;protein_id=WP_003420590.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 292496 293320 . - . ID=gene-DKM08_RS15665;Name=DKM08_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15665;old_locus_tag=DKM08_15645 NZ_QFYX01000002.1 Protein Homology CDS 292496 293320 . - 0 ID=cds-WP_003420587.1;Parent=gene-DKM08_RS15665;Dbxref=GenBank:WP_003420587.1;Name=WP_003420587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218291.1;locus_tag=DKM08_RS15665;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003420587.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 293344 293929 . + . ID=gene-DKM08_RS15670;Name=DKM08_RS15670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15670;old_locus_tag=DKM08_15650;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 293344 293929 . + 0 ID=cds-DKM08_RS15670;Parent=gene-DKM08_RS15670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218290.1;locus_tag=DKM08_RS15670;product=TIGR03086 family metal-binding protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 293975 295036 . - . ID=gene-DKM08_RS15675;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=DKM08_RS15675;old_locus_tag=DKM08_15655 NZ_QFYX01000002.1 Protein Homology CDS 293975 295036 . - 0 ID=cds-WP_003420576.1;Parent=gene-DKM08_RS15675;Dbxref=GenBank:WP_003420576.1;Name=WP_003420576.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218289.1;locus_tag=DKM08_RS15675;product=histidinol-phosphate transaminase;protein_id=WP_003420576.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 295114 295202 . + . ID=gene-DKM08_RS15680;Name=DKM08_RS15680;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS15680;old_locus_tag=DKM08_15660 NZ_QFYX01000002.1 tRNAscan-SE tRNA 295114 295202 . + . ID=rna-DKM08_RS15680;Parent=gene-DKM08_RS15680;anticodon=(pos:295148..295150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15680;product=tRNA-Ser NZ_QFYX01000002.1 tRNAscan-SE exon 295114 295202 . + . ID=exon-DKM08_RS15680-1;Parent=rna-DKM08_RS15680;anticodon=(pos:295148..295150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15680;product=tRNA-Ser NZ_QFYX01000002.1 RefSeq gene 295233 295305 . + . ID=gene-DKM08_RS15685;Name=DKM08_RS15685;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS15685;old_locus_tag=DKM08_15665 NZ_QFYX01000002.1 tRNAscan-SE tRNA 295233 295305 . + . ID=rna-DKM08_RS15685;Parent=gene-DKM08_RS15685;anticodon=(pos:295266..295268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15685;product=tRNA-Arg NZ_QFYX01000002.1 tRNAscan-SE exon 295233 295305 . + . ID=exon-DKM08_RS15685-1;Parent=rna-DKM08_RS15685;anticodon=(pos:295266..295268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15685;product=tRNA-Arg NZ_QFYX01000002.1 RefSeq gene 295440 295766 . + . ID=gene-DKM08_RS15690;Name=DKM08_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15690;old_locus_tag=DKM08_15670 NZ_QFYX01000002.1 Protein Homology CDS 295440 295766 . + 0 ID=cds-WP_003420573.1;Parent=gene-DKM08_RS15690;Dbxref=GenBank:WP_003420573.1;Name=WP_003420573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218288.1;locus_tag=DKM08_RS15690;product=hypothetical protein;protein_id=WP_003420573.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 295875 296250 . + . ID=gene-DKM08_RS15695;Name=DKM08_RS15695;end_range=296250,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15695;old_locus_tag=DKM08_15675;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 295875 296250 . + 0 ID=cds-DKM08_RS15695;Parent=gene-DKM08_RS15695;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=296250,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=DKM08_RS15695;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 296395 296970 . + . ID=gene-DKM08_RS15700;Name=DKM08_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15700;old_locus_tag=DKM08_15680 NZ_QFYX01000002.1 Protein Homology CDS 296395 296970 . + 0 ID=cds-WP_003420565.1;Parent=gene-DKM08_RS15700;Dbxref=GenBank:WP_003420565.1;Name=WP_003420565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218287.1;locus_tag=DKM08_RS15700;product=hypothetical protein;protein_id=WP_003420565.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 297283 297555 . - . ID=gene-DKM08_RS15705;Name=DKM08_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15705;old_locus_tag=DKM08_15685 NZ_QFYX01000002.1 Protein Homology CDS 297283 297555 . - 0 ID=cds-WP_003420563.1;Parent=gene-DKM08_RS15705;Dbxref=GenBank:WP_003420563.1;Name=WP_003420563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218286.1;locus_tag=DKM08_RS15705;product=hypothetical protein;protein_id=WP_003420563.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 297741 298100 . - . ID=gene-DKM08_RS15710;Name=DKM08_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15710;old_locus_tag=DKM08_15690 NZ_QFYX01000002.1 Protein Homology CDS 297741 298100 . - 0 ID=cds-WP_003420560.1;Parent=gene-DKM08_RS15710;Dbxref=GenBank:WP_003420560.1;Name=WP_003420560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218285.1;locus_tag=DKM08_RS15710;product=nuclear transport factor 2 family protein;protein_id=WP_003420560.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 298230 299174 . + . ID=gene-DKM08_RS15715;Name=DKM08_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15715;old_locus_tag=DKM08_15695 NZ_QFYX01000002.1 Protein Homology CDS 298230 299174 . + 0 ID=cds-WP_003420557.1;Parent=gene-DKM08_RS15715;Dbxref=GenBank:WP_003420557.1;Name=WP_003420557.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218284.1;locus_tag=DKM08_RS15715;product=class I SAM-dependent methyltransferase;protein_id=WP_003420557.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 299188 300012 . - . ID=gene-DKM08_RS15720;Name=DKM08_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15720;old_locus_tag=DKM08_15700 NZ_QFYX01000002.1 Protein Homology CDS 299188 300012 . - 0 ID=cds-WP_015385326.1;Parent=gene-DKM08_RS15720;Dbxref=GenBank:WP_015385326.1;Name=WP_015385326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912342.1;locus_tag=DKM08_RS15720;product=hypothetical protein;protein_id=WP_015385326.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 300386 301090 . + . ID=gene-DKM08_RS15725;Name=tcrX;gbkey=Gene;gene=tcrX;gene_biotype=protein_coding;locus_tag=DKM08_RS15725;old_locus_tag=DKM08_15705 NZ_QFYX01000002.1 Protein Homology CDS 300386 301090 . + 0 ID=cds-WP_003420552.1;Parent=gene-DKM08_RS15725;Dbxref=GenBank:WP_003420552.1;Name=WP_003420552.1;gbkey=CDS;gene=tcrX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218282.1;locus_tag=DKM08_RS15725;product=two-component system response regulator TcrX;protein_id=WP_003420552.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 301068 302588 . + . ID=gene-DKM08_RS15730;Name=tcrY;gbkey=Gene;gene=tcrY;gene_biotype=protein_coding;locus_tag=DKM08_RS15730;old_locus_tag=DKM08_15710 NZ_QFYX01000002.1 Protein Homology CDS 301068 302588 . + 0 ID=cds-WP_031652448.1;Parent=gene-DKM08_RS15730;Dbxref=GenBank:WP_031652448.1;Name=WP_031652448.1;gbkey=CDS;gene=tcrY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899682.1;locus_tag=DKM08_RS15730;product=two-component system sensor histidine kinase TcrY;protein_id=WP_031652448.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 302644 303123 . - . ID=gene-DKM08_RS15735;Name=lpqH;gbkey=Gene;gene=lpqH;gene_biotype=protein_coding;locus_tag=DKM08_RS15735;old_locus_tag=DKM08_15715 NZ_QFYX01000002.1 Protein Homology CDS 302644 303123 . - 0 ID=cds-WP_003420544.1;Parent=gene-DKM08_RS15735;Dbxref=GenBank:WP_003420544.1;Name=WP_003420544.1;gbkey=CDS;gene=lpqH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218280.1;locus_tag=DKM08_RS15735;product=lipoprotein LpqH;protein_id=WP_003420544.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 303294 305174 . + . ID=gene-DKM08_RS15740;Name=DKM08_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15740;old_locus_tag=DKM08_15720 NZ_QFYX01000002.1 Protein Homology CDS 303294 305174 . + 0 ID=cds-WP_011799374.1;Parent=gene-DKM08_RS15740;Dbxref=GenBank:WP_011799374.1;Name=WP_011799374.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218279.1;locus_tag=DKM08_RS15740;product=alkyl/aryl-sulfatase;protein_id=WP_011799374.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 305253 306308 . + . ID=gene-DKM08_RS15745;Name=DKM08_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15745;old_locus_tag=DKM08_15725 NZ_QFYX01000002.1 Protein Homology CDS 305253 306308 . + 0 ID=cds-WP_003420539.1;Parent=gene-DKM08_RS15745;Dbxref=GenBank:WP_003420539.1;Name=WP_003420539.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218278.1;locus_tag=DKM08_RS15745;product=phosphotransferase family protein;protein_id=WP_003420539.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 306330 306683 . - . ID=gene-DKM08_RS15750;Name=DKM08_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15750;old_locus_tag=DKM08_15730 NZ_QFYX01000002.1 Protein Homology CDS 306330 306683 . - 0 ID=cds-WP_003899680.1;Parent=gene-DKM08_RS15750;Dbxref=GenBank:WP_003899680.1;Name=WP_003899680.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899680.1;locus_tag=DKM08_RS15750;product=LapA family protein;protein_id=WP_003899680.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 306797 307744 . + . ID=gene-DKM08_RS15755;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=DKM08_RS15755;old_locus_tag=DKM08_15735 NZ_QFYX01000002.1 Protein Homology CDS 306797 307744 . + 0 ID=cds-WP_010950935.1;Parent=gene-DKM08_RS15755;Dbxref=GenBank:WP_010950935.1;Name=WP_010950935.1;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218276.1;locus_tag=DKM08_RS15755;product=glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_010950935.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 307753 308883 . + . ID=gene-DKM08_RS15760;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=DKM08_RS15760;old_locus_tag=DKM08_15740 NZ_QFYX01000002.1 Protein Homology CDS 307753 308883 . + 0 ID=cds-WP_003420529.1;Parent=gene-DKM08_RS15760;Dbxref=GenBank:WP_003420529.1;Name=WP_003420529.1;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218275.1;locus_tag=DKM08_RS15760;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_003420529.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 308871 309560 . + . ID=gene-DKM08_RS15765;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=DKM08_RS15765;old_locus_tag=DKM08_15745 NZ_QFYX01000002.1 Protein Homology CDS 308871 309560 . + 0 ID=cds-WP_003420526.1;Parent=gene-DKM08_RS15765;Dbxref=GenBank:WP_003420526.1;Name=WP_003420526.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218274.1;locus_tag=DKM08_RS15765;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProW;protein_id=WP_003420526.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 309557 310276 . + . ID=gene-DKM08_RS15770;Name=proZ;gbkey=Gene;gene=proZ;gene_biotype=protein_coding;locus_tag=DKM08_RS15770;old_locus_tag=DKM08_15750 NZ_QFYX01000002.1 Protein Homology CDS 309557 310276 . + 0 ID=cds-WP_003420520.1;Parent=gene-DKM08_RS15770;Dbxref=GenBank:WP_003420520.1;Name=WP_003420520.1;gbkey=CDS;gene=proZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218273.1;locus_tag=DKM08_RS15770;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProZ;protein_id=WP_003420520.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 310282 310881 . + . ID=gene-DKM08_RS15775;Name=DKM08_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15775;old_locus_tag=DKM08_15755 NZ_QFYX01000002.1 Protein Homology CDS 310282 310881 . + 0 ID=cds-WP_003420517.1;Parent=gene-DKM08_RS15775;Dbxref=GenBank:WP_003420517.1;Name=WP_003420517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218272.1;locus_tag=DKM08_RS15775;product=putative glycolipid-binding domain-containing protein;protein_id=WP_003420517.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 310844 311788 . - . ID=gene-DKM08_RS15780;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=DKM08_RS15780;old_locus_tag=DKM08_15760 NZ_QFYX01000002.1 Protein Homology CDS 310844 311788 . - 0 ID=cds-WP_003912273.1;Parent=gene-DKM08_RS15780;Dbxref=GenBank:WP_003912273.1;Name=WP_003912273.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351229.1;locus_tag=DKM08_RS15780;product=prephenate dehydrogenase;protein_id=WP_003912273.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 311928 312449 . + . ID=gene-DKM08_RS15785;Name=DKM08_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15785;old_locus_tag=DKM08_15765 NZ_QFYX01000002.1 Protein Homology CDS 311928 312449 . + 0 ID=cds-WP_003420511.1;Parent=gene-DKM08_RS15785;Dbxref=GenBank:WP_003420511.1;Name=WP_003420511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899676.1;locus_tag=DKM08_RS15785;product=tRNA adenosine deaminase-associated protein;protein_id=WP_003420511.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 312465 312923 . + . ID=gene-DKM08_RS15790;Name=DKM08_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15790;old_locus_tag=DKM08_15770 NZ_QFYX01000002.1 Protein Homology CDS 312465 312923 . + 0 ID=cds-WP_003420508.1;Parent=gene-DKM08_RS15790;Dbxref=GenBank:WP_003420508.1;Name=WP_003420508.1;Ontology_term=GO:0009116,GO:0008270,GO:0019239;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218269.1;locus_tag=DKM08_RS15790;product=nucleoside deaminase;protein_id=WP_003420508.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 312953 313042 . + . ID=gene-DKM08_RS15795;Name=DKM08_RS15795;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS15795;old_locus_tag=DKM08_15775 NZ_QFYX01000002.1 tRNAscan-SE tRNA 312953 313042 . + . ID=rna-DKM08_RS15795;Parent=gene-DKM08_RS15795;anticodon=(pos:312987..312989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15795;product=tRNA-Ser NZ_QFYX01000002.1 tRNAscan-SE exon 312953 313042 . + . ID=exon-DKM08_RS15795-1;Parent=rna-DKM08_RS15795;anticodon=(pos:312987..312989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15795;product=tRNA-Ser NZ_QFYX01000002.1 RefSeq gene 313081 313296 . - . ID=gene-DKM08_RS15800;Name=DKM08_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15800;old_locus_tag=DKM08_15780 NZ_QFYX01000002.1 Protein Homology CDS 313081 313296 . - 0 ID=cds-WP_003899674.1;Parent=gene-DKM08_RS15800;Dbxref=GenBank:WP_003899674.1;Name=WP_003899674.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294640.1;locus_tag=DKM08_RS15800;product=tyrosine-type recombinase/integrase;protein_id=WP_003899674.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 313518 313964 . + . ID=gene-DKM08_RS15810;Name=DKM08_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15810;old_locus_tag=DKM08_15790 NZ_QFYX01000002.1 Protein Homology CDS 313518 313964 . + 0 ID=cds-WP_016719233.1;Parent=gene-DKM08_RS15810;Dbxref=GenBank:WP_016719233.1;Name=WP_016719233.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719233.1;locus_tag=DKM08_RS15810;product=helix-turn-helix domain-containing protein;protein_id=WP_016719233.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 314191 314541 . + . ID=gene-DKM08_RS15815;Name=DKM08_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15815;old_locus_tag=DKM08_15795 NZ_QFYX01000002.1 GeneMarkS-2+ CDS 314191 314541 . + 0 ID=cds-WP_003917953.1;Parent=gene-DKM08_RS15815;Dbxref=GenBank:WP_003917953.1;Name=WP_003917953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS15815;product=hypothetical protein;protein_id=WP_003917953.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 314574 314933 . - . ID=gene-DKM08_RS15820;Name=DKM08_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15820;old_locus_tag=DKM08_15800 NZ_QFYX01000002.1 Protein Homology CDS 314574 314933 . - 0 ID=cds-WP_003909992.1;Parent=gene-DKM08_RS15820;Dbxref=GenBank:WP_003909992.1;Name=WP_003909992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218265.1;locus_tag=DKM08_RS15820;product=hypothetical protein;protein_id=WP_003909992.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 315063 315446 . - . ID=gene-DKM08_RS15825;Name=DKM08_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15825;old_locus_tag=DKM08_15805 NZ_QFYX01000002.1 Protein Homology CDS 315063 315446 . - 0 ID=cds-WP_003899671.1;Parent=gene-DKM08_RS15825;Dbxref=GenBank:WP_003899671.1;Name=WP_003899671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218264.1;locus_tag=DKM08_RS15825;product=hypothetical protein;protein_id=WP_003899671.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 315664 315999 . + . ID=gene-DKM08_RS15830;Name=DKM08_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15830;old_locus_tag=DKM08_15810 NZ_QFYX01000002.1 Protein Homology CDS 315664 315999 . + 0 ID=cds-WP_003899670.1;Parent=gene-DKM08_RS15830;Dbxref=GenBank:WP_003899670.1;Name=WP_003899670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178011.1;locus_tag=DKM08_RS15830;product=PE domain-containing protein;protein_id=WP_003899670.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 316072 316263 . + . ID=gene-DKM08_RS15835;Name=DKM08_RS15835;end_range=316263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS15835;old_locus_tag=DKM08_15815;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 316072 316263 . + 0 ID=cds-DKM08_RS15835;Parent=gene-DKM08_RS15835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=316263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019930003.1;locus_tag=DKM08_RS15835;partial=true;product=DUF2237 family protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 316368 316730 . - . ID=gene-DKM08_RS15840;Name=nmtR;gbkey=Gene;gene=nmtR;gene_biotype=protein_coding;locus_tag=DKM08_RS15840;old_locus_tag=DKM08_15820 NZ_QFYX01000002.1 Protein Homology CDS 316368 316730 . - 0 ID=cds-WP_003901716.1;Parent=gene-DKM08_RS15840;Dbxref=GenBank:WP_003901716.1;Name=WP_003901716.1;gbkey=CDS;gene=nmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218261.1;locus_tag=DKM08_RS15840;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor NmtR;protein_id=WP_003901716.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 316797 318779 . + . ID=gene-DKM08_RS15845;Name=ctpJ;gbkey=Gene;gene=ctpJ;gene_biotype=protein_coding;locus_tag=DKM08_RS15845;old_locus_tag=DKM08_15825 NZ_QFYX01000002.1 Protein Homology CDS 316797 318779 . + 0 ID=cds-WP_003899665.1;Parent=gene-DKM08_RS15845;Dbxref=GenBank:WP_003899665.1;Name=WP_003899665.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;gene=ctpJ;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218260.1;locus_tag=DKM08_RS15845;product=heavy metal translocating P-type ATPase;protein_id=WP_003899665.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 318805 319320 . + . ID=gene-DKM08_RS22790;Name=DKM08_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22790;old_locus_tag=DKM08_15830 NZ_QFYX01000002.1 GeneMarkS-2+ CDS 318805 319320 . + 0 ID=cds-WP_413671178.1;Parent=gene-DKM08_RS22790;Dbxref=GenBank:WP_413671178.1;Name=WP_413671178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22790;product=hypothetical protein;protein_id=WP_413671178.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 319317 319991 . + . ID=gene-DKM08_RS22795;Name=DKM08_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22795;old_locus_tag=DKM08_15835 NZ_QFYX01000002.1 GeneMarkS-2+ CDS 319317 319991 . + 0 ID=cds-WP_003900747.1;Parent=gene-DKM08_RS22795;Dbxref=GenBank:WP_003900747.1;Name=WP_003900747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22795;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900747.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 319991 321337 . + . ID=gene-DKM08_RS15860;Name=DKM08_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15860;old_locus_tag=DKM08_15840 NZ_QFYX01000002.1 Protein Homology CDS 319991 321337 . + 0 ID=cds-WP_010950934.1;Parent=gene-DKM08_RS15860;Dbxref=GenBank:WP_010950934.1;Name=WP_010950934.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218257.1;locus_tag=DKM08_RS15860;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_010950934.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 321402 321719 . + . ID=gene-DKM08_RS22440;Name=DKM08_RS22440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22440;old_locus_tag=DKM08_15845;partial=true;pseudo=true;start_range=.,321402 NZ_QFYX01000002.1 Protein Homology CDS 321402 321719 . + 0 ID=cds-DKM08_RS22440;Parent=gene-DKM08_RS22440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909072.1;locus_tag=DKM08_RS22440;partial=true;product=PPE family protein;pseudo=true;start_range=.,321402;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 321716 323305 . - . ID=gene-DKM08_RS15870;Name=DKM08_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15870;old_locus_tag=DKM08_15850 NZ_QFYX01000002.1 Protein Homology CDS 321716 323305 . - 0 ID=cds-WP_003899660.1;Parent=gene-DKM08_RS15870;Dbxref=GenBank:WP_003899660.1;Name=WP_003899660.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218254.1;locus_tag=DKM08_RS15870;product=threonine/serine ThrE exporter family protein;protein_id=WP_003899660.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 323309 324370 . - . ID=gene-DKM08_RS15875;Name=DKM08_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15875;old_locus_tag=DKM08_15855 NZ_QFYX01000002.1 Protein Homology CDS 323309 324370 . - 0 ID=cds-WP_003899659.1;Parent=gene-DKM08_RS15875;Dbxref=GenBank:WP_003899659.1;Name=WP_003899659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218253.1;locus_tag=DKM08_RS15875;product=AraC family transcriptional regulator;protein_id=WP_003899659.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 324427 324915 . - . ID=gene-DKM08_RS15880;Name=DKM08_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15880;old_locus_tag=DKM08_15860 NZ_QFYX01000002.1 Protein Homology CDS 324427 324915 . - 0 ID=cds-WP_003899658.1;Parent=gene-DKM08_RS15880;Dbxref=GenBank:WP_003899658.1;Name=WP_003899658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218252.1;locus_tag=DKM08_RS15880;product=adenosine-specific kinase;protein_id=WP_003899658.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 325114 326478 . + . ID=gene-DKM08_RS15885;Name=DKM08_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15885;old_locus_tag=DKM08_15865 NZ_QFYX01000002.1 Protein Homology CDS 325114 326478 . + 0 ID=cds-WP_003420440.1;Parent=gene-DKM08_RS15885;Dbxref=GenBank:WP_003420440.1;Name=WP_003420440.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218251.1;locus_tag=DKM08_RS15885;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003420440.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 326492 326992 . + . ID=gene-DKM08_RS15890;Name=DKM08_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15890;old_locus_tag=DKM08_15870 NZ_QFYX01000002.1 Protein Homology CDS 326492 326992 . + 0 ID=cds-WP_003420437.1;Parent=gene-DKM08_RS15890;Dbxref=GenBank:WP_003420437.1;Name=WP_003420437.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218250.1;locus_tag=DKM08_RS15890;product=NUDIX domain-containing protein;protein_id=WP_003420437.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 327012 328070 . - . ID=gene-DKM08_RS15895;Name=DKM08_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15895;old_locus_tag=DKM08_15875 NZ_QFYX01000002.1 Protein Homology CDS 327012 328070 . - 0 ID=cds-WP_003420436.1;Parent=gene-DKM08_RS15895;Dbxref=GenBank:WP_003420436.1;Name=WP_003420436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218249.1;locus_tag=DKM08_RS15895;product=DUF2330 domain-containing protein;protein_id=WP_003420436.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 328170 329246 . - . ID=gene-DKM08_RS15900;Name=ligC;gbkey=Gene;gene=ligC;gene_biotype=protein_coding;locus_tag=DKM08_RS15900;old_locus_tag=DKM08_15880 NZ_QFYX01000002.1 Protein Homology CDS 328170 329246 . - 0 ID=cds-WP_003420435.1;Parent=gene-DKM08_RS15900;Dbxref=GenBank:WP_003420435.1;Name=WP_003420435.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;gene=ligC;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218248.1;locus_tag=DKM08_RS15900;product=ATP-dependent DNA ligase;protein_id=WP_003420435.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 329284 330324 . + . ID=gene-DKM08_RS15905;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=DKM08_RS15905;old_locus_tag=DKM08_15885 NZ_QFYX01000002.1 Protein Homology CDS 329284 330324 . + 0 ID=cds-WP_003899657.1;Parent=gene-DKM08_RS15905;Dbxref=GenBank:WP_003899657.1;Name=WP_003899657.1;gbkey=CDS;gene=ligD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218247.1;locus_tag=DKM08_RS15905;product=non-homologous end-joining DNA ligase;protein_id=WP_003899657.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 330389 332755 . - . ID=gene-DKM08_RS15910;Name=DKM08_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15910;old_locus_tag=DKM08_15890 NZ_QFYX01000002.1 Protein Homology CDS 330389 332755 . - 0 ID=cds-WP_015385324.1;Parent=gene-DKM08_RS15910;Dbxref=GenBank:WP_015385324.1;Name=WP_015385324.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899656.1;locus_tag=DKM08_RS15910;product=radical SAM protein;protein_id=WP_015385324.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 332934 336131 . - . ID=gene-DKM08_RS15915;Name=DKM08_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15915;old_locus_tag=DKM08_15895 NZ_QFYX01000002.1 Protein Homology CDS 332934 336131 . - 0 ID=cds-WP_010950932.1;Parent=gene-DKM08_RS15915;Dbxref=GenBank:WP_010950932.1;Name=WP_010950932.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218245.1;locus_tag=DKM08_RS15915;product=MFS transporter;protein_id=WP_010950932.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 336241 338049 . - . ID=gene-DKM08_RS15920;Name=DKM08_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15920;old_locus_tag=DKM08_15900 NZ_QFYX01000002.1 Protein Homology CDS 336241 338049 . - 0 ID=cds-WP_010950931.1;Parent=gene-DKM08_RS15920;Dbxref=GenBank:WP_010950931.1;Name=WP_010950931.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218244.1;locus_tag=DKM08_RS15920;product=hydroxysqualene dehydroxylase;protein_id=WP_010950931.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 338390 339583 . - . ID=gene-DKM08_RS15925;Name=DKM08_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15925;old_locus_tag=DKM08_15905 NZ_QFYX01000002.1 Protein Homology CDS 338390 339583 . - 0 ID=cds-WP_003909986.1;Parent=gene-DKM08_RS15925;Dbxref=GenBank:WP_003909986.1;Name=WP_003909986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218243.1;locus_tag=DKM08_RS15925;product=zinc-binding dehydrogenase;protein_id=WP_003909986.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 339790 340776 . - . ID=gene-DKM08_RS15930;Name=DKM08_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15930;old_locus_tag=DKM08_15910 NZ_QFYX01000002.1 Protein Homology CDS 339790 340776 . - 0 ID=cds-WP_031657319.1;Parent=gene-DKM08_RS15930;Dbxref=GenBank:WP_031657319.1;Name=WP_031657319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575361.1;locus_tag=DKM08_RS15930;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_031657319.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 340836 341537 . - . ID=gene-DKM08_RS15935;Name=DKM08_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15935;old_locus_tag=DKM08_15915 NZ_QFYX01000002.1 Protein Homology CDS 340836 341537 . - 0 ID=cds-WP_003420425.1;Parent=gene-DKM08_RS15935;Dbxref=GenBank:WP_003420425.1;Name=WP_003420425.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420425.1;locus_tag=DKM08_RS15935;product=cutinase family protein;protein_id=WP_003420425.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 341704 342468 . - . ID=gene-DKM08_RS15940;Name=lucA;gbkey=Gene;gene=lucA;gene_biotype=protein_coding;locus_tag=DKM08_RS15940;old_locus_tag=DKM08_15920 NZ_QFYX01000002.1 Protein Homology CDS 341704 342468 . - 0 ID=cds-WP_003420421.1;Parent=gene-DKM08_RS15940;Dbxref=GenBank:WP_003420421.1;Name=WP_003420421.1;gbkey=CDS;gene=lucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218240.1;locus_tag=DKM08_RS15940;product=lipid uptake coordinator LucA;protein_id=WP_003420421.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 342571 342659 . - . ID=gene-DKM08_RS15945;Name=DKM08_RS15945;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS15945;old_locus_tag=DKM08_15925 NZ_QFYX01000002.1 tRNAscan-SE tRNA 342571 342659 . - . ID=rna-DKM08_RS15945;Parent=gene-DKM08_RS15945;anticodon=(pos:complement(342623..342625));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15945;product=tRNA-Ser NZ_QFYX01000002.1 tRNAscan-SE exon 342571 342659 . - . ID=exon-DKM08_RS15945-1;Parent=rna-DKM08_RS15945;anticodon=(pos:complement(342623..342625));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS15945;product=tRNA-Ser NZ_QFYX01000002.1 RefSeq gene 342720 342814 . + . ID=gene-DKM08_RS15950;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=DKM08_RS15950;old_locus_tag=DKM08_15930 NZ_QFYX01000002.1 cmsearch SRP_RNA 342720 342814 . + . ID=rna-DKM08_RS15950;Parent=gene-DKM08_RS15950;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS15950;product=signal recognition particle sRNA small type NZ_QFYX01000002.1 cmsearch exon 342720 342814 . + . ID=exon-DKM08_RS15950-1;Parent=rna-DKM08_RS15950;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS15950;product=signal recognition particle sRNA small type NZ_QFYX01000002.1 RefSeq gene 342876 344183 . + . ID=gene-DKM08_RS15955;Name=DKM08_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15955;old_locus_tag=DKM08_15935 NZ_QFYX01000002.1 Protein Homology CDS 342876 344183 . + 0 ID=cds-WP_003899653.1;Parent=gene-DKM08_RS15955;Dbxref=GenBank:WP_003899653.1;Name=WP_003899653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218239.2;locus_tag=DKM08_RS15955;product=aminotransferase;protein_id=WP_003899653.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 344273 346009 . + . ID=gene-DKM08_RS15960;Name=dnaZX;gbkey=Gene;gene=dnaZX;gene_biotype=protein_coding;locus_tag=DKM08_RS15960;old_locus_tag=DKM08_15940 NZ_QFYX01000002.1 Protein Homology CDS 344273 346009 . + 0 ID=cds-WP_003420417.1;Parent=gene-DKM08_RS15960;Dbxref=GenBank:WP_003420417.1;Name=WP_003420417.1;gbkey=CDS;gene=dnaZX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218238.1;locus_tag=DKM08_RS15960;product=DNA polymerase III subunits gamma/tau;protein_id=WP_003420417.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 346006 347289 . - . ID=gene-DKM08_RS15965;Name=DKM08_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15965;old_locus_tag=DKM08_15945 NZ_QFYX01000002.1 Protein Homology CDS 346006 347289 . - 0 ID=cds-WP_003899652.1;Parent=gene-DKM08_RS15965;Dbxref=GenBank:WP_003899652.1;Name=WP_003899652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899652.1;locus_tag=DKM08_RS15965;product=class I SAM-dependent methyltransferase;protein_id=WP_003899652.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 347286 348698 . - . ID=gene-DKM08_RS15970;Name=DKM08_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15970;old_locus_tag=DKM08_15950 NZ_QFYX01000002.1 Protein Homology CDS 347286 348698 . - 0 ID=cds-WP_003420413.1;Parent=gene-DKM08_RS15970;Dbxref=GenBank:WP_003420413.1;Name=WP_003420413.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013128575.1;locus_tag=DKM08_RS15970;product=FAD-binding oxidoreductase;protein_id=WP_003420413.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 348746 349189 . + . ID=gene-DKM08_RS15975;Name=DKM08_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15975;old_locus_tag=DKM08_15955 NZ_QFYX01000002.1 Protein Homology CDS 348746 349189 . + 0 ID=cds-WP_003899651.1;Parent=gene-DKM08_RS15975;Dbxref=GenBank:WP_003899651.1;Name=WP_003899651.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218235.1;locus_tag=DKM08_RS15975;product=SRPBCC family protein;protein_id=WP_003899651.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 349231 349992 . - . ID=gene-DKM08_RS15980;Name=DKM08_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15980;old_locus_tag=DKM08_15960 NZ_QFYX01000002.1 Protein Homology CDS 349231 349992 . - 0 ID=cds-WP_003912326.1;Parent=gene-DKM08_RS15980;Dbxref=GenBank:WP_003912326.1;Name=WP_003912326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912326.1;locus_tag=DKM08_RS15980;product=Rv3717 family N-acetylmuramoyl-L-alanine amidase;protein_id=WP_003912326.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 350091 350492 . + . ID=gene-DKM08_RS15985;Name=DKM08_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15985;old_locus_tag=DKM08_15965 NZ_QFYX01000002.1 Protein Homology CDS 350091 350492 . + 0 ID=cds-WP_003420408.1;Parent=gene-DKM08_RS15985;Dbxref=GenBank:WP_003420408.1;Name=WP_003420408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218233.1;locus_tag=DKM08_RS15985;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_003420408.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 350504 351115 . + . ID=gene-DKM08_RS15990;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=DKM08_RS15990;old_locus_tag=DKM08_15970 NZ_QFYX01000002.1 Protein Homology CDS 350504 351115 . + 0 ID=cds-WP_003420407.1;Parent=gene-DKM08_RS15990;Dbxref=GenBank:WP_003420407.1;Name=WP_003420407.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218232.1;locus_tag=DKM08_RS15990;product=recombination mediator RecR;protein_id=WP_003420407.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 351183 352073 . + . ID=gene-DKM08_RS15995;Name=DKM08_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS15995;old_locus_tag=DKM08_15975 NZ_QFYX01000002.1 Protein Homology CDS 351183 352073 . + 0 ID=cds-WP_003420405.1;Parent=gene-DKM08_RS15995;Dbxref=GenBank:WP_003420405.1;Name=WP_003420405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218231.1;locus_tag=DKM08_RS15995;product=hypothetical protein;protein_id=WP_003420405.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 352082 352777 . - . ID=gene-DKM08_RS16000;Name=DKM08_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16000;old_locus_tag=DKM08_15980 NZ_QFYX01000002.1 Protein Homology CDS 352082 352777 . - 0 ID=cds-WP_003900739.1;Parent=gene-DKM08_RS16000;Dbxref=GenBank:WP_003900739.1;Name=WP_003900739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218230.1;locus_tag=DKM08_RS16000;product=type 1 glutamine amidotransferase;protein_id=WP_003900739.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 352782 354023 . - . ID=gene-DKM08_RS16005;Name=DKM08_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16005;old_locus_tag=DKM08_15985 NZ_QFYX01000002.1 Protein Homology CDS 352782 354023 . - 0 ID=cds-WP_010950929.1;Parent=gene-DKM08_RS16005;Dbxref=GenBank:WP_010950929.1;Name=WP_010950929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218229.1;locus_tag=DKM08_RS16005;product=Mur ligase family protein;protein_id=WP_010950929.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 354216 355205 . + . ID=gene-DKM08_RS16015;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=DKM08_RS16015;old_locus_tag=DKM08_15995 NZ_QFYX01000002.1 Protein Homology CDS 354216 355205 . + 0 ID=cds-WP_003420320.1;Parent=gene-DKM08_RS16015;Dbxref=GenBank:WP_003420320.1;Name=WP_003420320.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218228.1;locus_tag=DKM08_RS16015;product=DEDDh family exonuclease;protein_id=WP_003420320.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 355271 357376 . - . ID=gene-DKM08_RS16020;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=DKM08_RS16020;old_locus_tag=DKM08_16000 NZ_QFYX01000002.1 Protein Homology CDS 355271 357376 . - 0 ID=cds-WP_023349635.1;Parent=gene-DKM08_RS16020;Dbxref=GenBank:WP_023349635.1;Name=WP_023349635.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023349635.1;locus_tag=DKM08_RS16020;product=2-isopropylmalate synthase;protein_id=WP_023349635.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 357633 358898 . + . ID=gene-DKM08_RS16025;Name=ask;gbkey=Gene;gene=ask;gene_biotype=protein_coding;locus_tag=DKM08_RS16025;old_locus_tag=DKM08_16005 NZ_QFYX01000002.1 Protein Homology CDS 357633 358898 . + 0 ID=cds-WP_003419828.1;Parent=gene-DKM08_RS16025;Dbxref=GenBank:WP_003419828.1;Name=WP_003419828.1;Ontology_term=GO:0008652,GO:0004072;gbkey=CDS;gene=ask;go_function=aspartate kinase activity|0004072||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218226.1;locus_tag=DKM08_RS16025;product=aspartate kinase;protein_id=WP_003419828.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 358899 359936 . + . ID=gene-DKM08_RS16030;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=DKM08_RS16030;old_locus_tag=DKM08_16010 NZ_QFYX01000002.1 Protein Homology CDS 358899 359936 . + 0 ID=cds-WP_003419825.1;Parent=gene-DKM08_RS16030;Dbxref=GenBank:WP_003419825.1;Name=WP_003419825.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218225.1;locus_tag=DKM08_RS16030;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_003419825.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 359938 361086 . + . ID=gene-DKM08_RS16035;Name=DKM08_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16035;old_locus_tag=DKM08_16015 NZ_QFYX01000002.1 Protein Homology CDS 359938 361086 . + 0 ID=cds-WP_003899648.1;Parent=gene-DKM08_RS16035;Dbxref=GenBank:WP_003899648.1;Name=WP_003899648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719265.1;locus_tag=DKM08_RS16035;product=DUF4185 domain-containing protein;protein_id=WP_003899648.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 361205 361525 . + . ID=gene-DKM08_RS16040;Name=DKM08_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16040;old_locus_tag=DKM08_16020 NZ_QFYX01000002.1 Protein Homology CDS 361205 361525 . + 0 ID=cds-WP_003419816.1;Parent=gene-DKM08_RS16040;Dbxref=GenBank:WP_003419816.1;Name=WP_003419816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218223.1;locus_tag=DKM08_RS16040;product=hypothetical protein;protein_id=WP_003419816.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 361636 362025 . + . ID=gene-DKM08_RS16045;Name=DKM08_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16045;old_locus_tag=DKM08_16025 NZ_QFYX01000002.1 Protein Homology CDS 361636 362025 . + 0 ID=cds-WP_003419814.1;Parent=gene-DKM08_RS16045;Dbxref=GenBank:WP_003419814.1;Name=WP_003419814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178006.1;locus_tag=DKM08_RS16045;product=hypothetical protein;protein_id=WP_003419814.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 362154 362798 . + . ID=gene-DKM08_RS16050;Name=DKM08_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16050;old_locus_tag=DKM08_16030 NZ_QFYX01000002.1 Protein Homology CDS 362154 362798 . + 0 ID=cds-WP_003419812.1;Parent=gene-DKM08_RS16050;Dbxref=GenBank:WP_003419812.1;Name=WP_003419812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218222.1;locus_tag=DKM08_RS16050;product=sensor domain-containing protein;protein_id=WP_003419812.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 362930 364228 . + . ID=gene-DKM08_RS16055;Name=egtA;gbkey=Gene;gene=egtA;gene_biotype=protein_coding;locus_tag=DKM08_RS16055;old_locus_tag=DKM08_16035 NZ_QFYX01000002.1 Protein Homology CDS 362930 364228 . + 0 ID=cds-WP_003419809.1;Parent=gene-DKM08_RS16055;Dbxref=GenBank:WP_003419809.1;Name=WP_003419809.1;Ontology_term=GO:0052699,GO:0004357;gbkey=CDS;gene=egtA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218221.1;locus_tag=DKM08_RS16055;product=ergothioneine biosynthesis glutamate--cysteine ligase EgtA;protein_id=WP_003419809.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 364225 365502 . + . ID=gene-DKM08_RS16060;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=DKM08_RS16060;old_locus_tag=DKM08_16040 NZ_QFYX01000002.1 Protein Homology CDS 364225 365502 . + 0 ID=cds-WP_003419808.1;Parent=gene-DKM08_RS16060;Dbxref=GenBank:WP_003419808.1;Name=WP_003419808.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218220.1;locus_tag=DKM08_RS16060;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_003419808.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 365502 366203 . + . ID=gene-DKM08_RS16065;Name=egtC;gbkey=Gene;gene=egtC;gene_biotype=protein_coding;locus_tag=DKM08_RS16065;old_locus_tag=DKM08_16045 NZ_QFYX01000002.1 Protein Homology CDS 365502 366203 . + 0 ID=cds-WP_003419806.1;Parent=gene-DKM08_RS16065;Dbxref=GenBank:WP_003419806.1;Name=WP_003419806.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtC;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218219.1;locus_tag=DKM08_RS16065;product=ergothioneine biosynthesis protein EgtC;protein_id=WP_003419806.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 366200 367165 . + . ID=gene-DKM08_RS16070;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=DKM08_RS16070;old_locus_tag=DKM08_16050 NZ_QFYX01000002.1 Protein Homology CDS 366200 367165 . + 0 ID=cds-WP_003419799.1;Parent=gene-DKM08_RS16070;Dbxref=GenBank:WP_003419799.1;Name=WP_003419799.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218218.1;locus_tag=DKM08_RS16070;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_003419799.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 367196 368368 . + . ID=gene-DKM08_RS16075;Name=egtE;gbkey=Gene;gene=egtE;gene_biotype=protein_coding;locus_tag=DKM08_RS16075;old_locus_tag=DKM08_16055 NZ_QFYX01000002.1 Protein Homology CDS 367196 368368 . + 0 ID=cds-WP_003901701.1;Parent=gene-DKM08_RS16075;Dbxref=GenBank:WP_003901701.1;Name=WP_003901701.1;Ontology_term=GO:0052699,GO:0016829;gbkey=CDS;gene=egtE;go_function=lyase activity|0016829||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218217.1;locus_tag=DKM08_RS16075;product=ergothioneine biosynthesis PLP-dependent enzyme EgtE;protein_id=WP_003901701.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 368371 369072 . - . ID=gene-DKM08_RS16080;Name=DKM08_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16080;old_locus_tag=DKM08_16060 NZ_QFYX01000002.1 Protein Homology CDS 368371 369072 . - 0 ID=cds-WP_003419793.1;Parent=gene-DKM08_RS16080;Dbxref=GenBank:WP_003419793.1;Name=WP_003419793.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218216.1;locus_tag=DKM08_RS16080;product=class I SAM-dependent methyltransferase;protein_id=WP_003419793.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 369094 370566 . - . ID=gene-DKM08_RS16085;Name=DKM08_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16085;old_locus_tag=DKM08_16065 NZ_QFYX01000002.1 Protein Homology CDS 369094 370566 . - 0 ID=cds-WP_031702233.1;Parent=gene-DKM08_RS16085;Dbxref=GenBank:WP_031702233.1;Name=WP_031702233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419790.1;locus_tag=DKM08_RS16085;product=glutamate--cysteine ligase;protein_id=WP_031702233.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 370653 370877 . + . ID=gene-DKM08_RS16090;Name=DKM08_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16090;old_locus_tag=DKM08_16070 NZ_QFYX01000002.1 Protein Homology CDS 370653 370877 . + 0 ID=cds-WP_003419787.1;Parent=gene-DKM08_RS16090;Dbxref=GenBank:WP_003419787.1;Name=WP_003419787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007412423.1;locus_tag=DKM08_RS16090;product=antitoxin VapB48;protein_id=WP_003419787.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 370874 371311 . + . ID=gene-DKM08_RS16095;Name=DKM08_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16095;old_locus_tag=DKM08_16075 NZ_QFYX01000002.1 Protein Homology CDS 370874 371311 . + 0 ID=cds-WP_003419785.1;Parent=gene-DKM08_RS16095;Dbxref=GenBank:WP_003419785.1;Name=WP_003419785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218214.1;locus_tag=DKM08_RS16095;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003419785.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 371361 372914 . + . ID=gene-DKM08_RS16100;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=DKM08_RS16100;old_locus_tag=DKM08_16080 NZ_QFYX01000002.1 Protein Homology CDS 371361 372914 . + 0 ID=cds-WP_186806928.1;Parent=gene-DKM08_RS16100;Dbxref=GenBank:WP_186806928.1;Name=WP_186806928.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218213.1;locus_tag=DKM08_RS16100;product=glycerol kinase GlpK;protein_id=WP_186806928.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 372978 373910 . - . ID=gene-DKM08_RS16105;Name=DKM08_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16105;old_locus_tag=DKM08_16085 NZ_QFYX01000002.1 Protein Homology CDS 372978 373910 . - 0 ID=cds-WP_003419780.1;Parent=gene-DKM08_RS16105;Dbxref=GenBank:WP_003419780.1;Name=WP_003419780.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218212.1;locus_tag=DKM08_RS16105;product=RDD family protein;protein_id=WP_003419780.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 374002 374994 . + . ID=gene-DKM08_RS16110;Name=DKM08_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16110;old_locus_tag=DKM08_16090 NZ_QFYX01000002.1 Protein Homology CDS 374002 374994 . + 0 ID=cds-WP_003419778.1;Parent=gene-DKM08_RS16110;Dbxref=GenBank:WP_003419778.1;Name=WP_003419778.1;Ontology_term=GO:0030435,GO:0042173,GO:1901893;gbkey=CDS;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA,regulation of sporulation resulting in formation of a cellular spore|0042173||IEA,positive regulation of cell septum assembly|1901893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218211.1;locus_tag=DKM08_RS16110;product=stage II sporulation protein M;protein_id=WP_003419778.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 375068 376390 . - . ID=gene-DKM08_RS16115;Name=DKM08_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16115;old_locus_tag=DKM08_16095 NZ_QFYX01000002.1 Protein Homology CDS 375068 376390 . - 0 ID=cds-WP_003419776.1;Parent=gene-DKM08_RS16115;Dbxref=GenBank:WP_003419776.1;Name=WP_003419776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218210.1;locus_tag=DKM08_RS16115;product=DUF58 domain-containing protein;protein_id=WP_003419776.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 376444 376515 . - . ID=gene-DKM08_RS22800;Name=DKM08_RS22800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22800;partial=true;pseudo=true;start_range=.,376444 NZ_QFYX01000002.1 Protein Homology CDS 376444 376515 . - 0 ID=cds-DKM08_RS22800;Parent=gene-DKM08_RS22800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=DKM08_RS22800;partial=true;product=hypothetical protein;pseudo=true;start_range=.,376444;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 376524 377600 . - . ID=gene-DKM08_RS16125;Name=DKM08_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16125;old_locus_tag=DKM08_16105 NZ_QFYX01000002.1 Protein Homology CDS 376524 377600 . - 0 ID=cds-WP_003419775.1;Parent=gene-DKM08_RS16125;Dbxref=GenBank:WP_003419775.1;Name=WP_003419775.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218209.1;locus_tag=DKM08_RS16125;product=AAA family ATPase;protein_id=WP_003419775.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 377597 378742 . - . ID=gene-DKM08_RS16130;Name=DKM08_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16130;old_locus_tag=DKM08_16110 NZ_QFYX01000002.1 Protein Homology CDS 377597 378742 . - 0 ID=cds-WP_003899642.1;Parent=gene-DKM08_RS16130;Dbxref=GenBank:WP_003899642.1;Name=WP_003899642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899642.1;locus_tag=DKM08_RS16130;product=DUF4350 domain-containing protein;protein_id=WP_003899642.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 378724 379377 . - . ID=gene-DKM08_RS16135;Name=DKM08_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16135;old_locus_tag=DKM08_16115 NZ_QFYX01000002.1 Protein Homology CDS 378724 379377 . - 0 ID=cds-WP_003419770.1;Parent=gene-DKM08_RS16135;Dbxref=GenBank:WP_003419770.1;Name=WP_003419770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218207.1;locus_tag=DKM08_RS16135;product=DUF4129 domain-containing protein;protein_id=WP_003419770.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 379404 380759 . - . ID=gene-DKM08_RS16140;Name=DKM08_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16140;old_locus_tag=DKM08_16120 NZ_QFYX01000002.1 Protein Homology CDS 379404 380759 . - 0 ID=cds-WP_003419768.1;Parent=gene-DKM08_RS16140;Dbxref=GenBank:WP_003419768.1;Name=WP_003419768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631611.1;locus_tag=DKM08_RS16140;product=membrane protein;protein_id=WP_003419768.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 380759 381223 . + . ID=gene-DKM08_RS16145;Name=DKM08_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16145;old_locus_tag=DKM08_16125 NZ_QFYX01000002.1 Protein Homology CDS 380759 381223 . + 0 ID=cds-WP_003419765.1;Parent=gene-DKM08_RS16145;Dbxref=GenBank:WP_003419765.1;Name=WP_003419765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218205.1;locus_tag=DKM08_RS16145;product=GatB/YqeY domain-containing protein;protein_id=WP_003419765.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 381425 381793 . + . ID=gene-DKM08_RS16150;Name=rsfB;gbkey=Gene;gene=rsfB;gene_biotype=pseudogene;locus_tag=DKM08_RS16150;old_locus_tag=DKM08_16130;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 381425 381793 . + 0 ID=cds-DKM08_RS16150;Parent=gene-DKM08_RS16150;Note=internal stop;Ontology_term=GO:0006355,GO:0043856;gbkey=CDS;gene=rsfB;go_function=anti-sigma factor antagonist activity|0043856||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218204.1;locus_tag=DKM08_RS16150;product=STAS domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 382033 382365 . + . ID=gene-DKM08_RS16155;Name=DKM08_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16155;old_locus_tag=DKM08_16135 NZ_QFYX01000002.1 Protein Homology CDS 382033 382365 . + 0 ID=cds-WP_003901696.1;Parent=gene-DKM08_RS16155;Dbxref=GenBank:WP_003901696.1;Name=WP_003901696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218203.1;locus_tag=DKM08_RS16155;product=hypothetical protein;protein_id=WP_003901696.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 382391 383821 . + . ID=gene-DKM08_RS16160;Name=DKM08_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16160;old_locus_tag=DKM08_16140 NZ_QFYX01000002.1 Protein Homology CDS 382391 383821 . + 0 ID=cds-WP_010950925.1;Parent=gene-DKM08_RS16160;Dbxref=GenBank:WP_010950925.1;Name=WP_010950925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218202.1;locus_tag=DKM08_RS16160;product=cytochrome P450;protein_id=WP_010950925.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 383855 384079 . - . ID=gene-DKM08_RS22805;Name=DKM08_RS22805;end_range=384079,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22805;old_locus_tag=DKM08_16145;partial=true;pseudo=true;start_range=.,383855 NZ_QFYX01000002.1 Protein Homology CDS 383855 384079 . - 0 ID=cds-DKM08_RS22805;Parent=gene-DKM08_RS22805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=384079,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=DKM08_RS22805;partial=true;product=Fic family protein;pseudo=true;start_range=.,383855;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 384502 384575 . - . ID=gene-DKM08_RS16170;Name=DKM08_RS16170;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS16170;old_locus_tag=DKM08_16150 NZ_QFYX01000002.1 tRNAscan-SE tRNA 384502 384575 . - . ID=rna-DKM08_RS16170;Parent=gene-DKM08_RS16170;anticodon=(pos:complement(384539..384541));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS16170;product=tRNA-Pro NZ_QFYX01000002.1 tRNAscan-SE exon 384502 384575 . - . ID=exon-DKM08_RS16170-1;Parent=rna-DKM08_RS16170;anticodon=(pos:complement(384539..384541));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS16170;product=tRNA-Pro NZ_QFYX01000002.1 RefSeq gene 384637 385743 . - . ID=gene-DKM08_RS16175;Name=DKM08_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16175;old_locus_tag=DKM08_16155 NZ_QFYX01000002.1 Protein Homology CDS 384637 385743 . - 0 ID=cds-WP_003419750.1;Parent=gene-DKM08_RS16175;Dbxref=GenBank:WP_003419750.1;Name=WP_003419750.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419750.1;locus_tag=DKM08_RS16175;product=PLP-dependent cysteine synthase family protein;protein_id=WP_003419750.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 385740 386699 . - . ID=gene-DKM08_RS16180;Name=DKM08_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16180;old_locus_tag=DKM08_16160 NZ_QFYX01000002.1 Protein Homology CDS 385740 386699 . - 0 ID=cds-WP_003899637.1;Parent=gene-DKM08_RS16180;Dbxref=GenBank:WP_003899637.1;Name=WP_003899637.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218200.1;locus_tag=DKM08_RS16180;product=metallophosphoesterase;protein_id=WP_003899637.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 386768 389200 . - . ID=gene-DKM08_RS16185;Name=ponA2;gbkey=Gene;gene=ponA2;gene_biotype=protein_coding;locus_tag=DKM08_RS16185;old_locus_tag=DKM08_16165 NZ_QFYX01000002.1 Protein Homology CDS 386768 389200 . - 0 ID=cds-WP_003419746.1;Parent=gene-DKM08_RS16185;Dbxref=GenBank:WP_003419746.1;Name=WP_003419746.1;gbkey=CDS;gene=ponA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178005.1;locus_tag=DKM08_RS16185;product=transglycosylase/D%2CD-transpeptidase PonA2;protein_id=WP_003419746.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 389562 389918 . + . ID=gene-DKM08_RS16190;Name=whiB4;gbkey=Gene;gene=whiB4;gene_biotype=protein_coding;locus_tag=DKM08_RS16190;old_locus_tag=DKM08_16170 NZ_QFYX01000002.1 Protein Homology CDS 389562 389918 . + 0 ID=cds-WP_003419743.1;Parent=gene-DKM08_RS16190;Dbxref=GenBank:WP_003419743.1;Name=WP_003419743.1;gbkey=CDS;gene=whiB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218198.2;locus_tag=DKM08_RS16190;product=transcriptional regulator WhiB4;protein_id=WP_003419743.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 390161 391321 . - . ID=gene-DKM08_RS16195;Name=DKM08_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16195;old_locus_tag=DKM08_16175 NZ_QFYX01000002.1 Protein Homology CDS 390161 391321 . - 0 ID=cds-WP_003419740.1;Parent=gene-DKM08_RS16195;Dbxref=GenBank:WP_003419740.1;Name=WP_003419740.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218197.1;locus_tag=DKM08_RS16195;product=ArsA family ATPase;protein_id=WP_003419740.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 391318 392340 . - . ID=gene-DKM08_RS16200;Name=DKM08_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16200;old_locus_tag=DKM08_16180 NZ_QFYX01000002.1 Protein Homology CDS 391318 392340 . - 0 ID=cds-WP_003419738.1;Parent=gene-DKM08_RS16200;Dbxref=GenBank:WP_003419738.1;Name=WP_003419738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218196.1;locus_tag=DKM08_RS16200;product=ArsA-related P-loop ATPase;protein_id=WP_003419738.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 392425 392586 . + . ID=gene-DKM08_RS16205;Name=DKM08_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16205;old_locus_tag=DKM08_16185 NZ_QFYX01000002.1 Protein Homology CDS 392425 392586 . + 0 ID=cds-WP_003419736.1;Parent=gene-DKM08_RS16205;Dbxref=GenBank:WP_003419736.1;Name=WP_003419736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178004.1;locus_tag=DKM08_RS16205;product=DUF4177 domain-containing protein;protein_id=WP_003419736.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 392602 393057 . + . ID=gene-DKM08_RS16210;Name=DKM08_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16210;old_locus_tag=DKM08_16190 NZ_QFYX01000002.1 Protein Homology CDS 392602 393057 . + 0 ID=cds-WP_003419733.1;Parent=gene-DKM08_RS16210;Dbxref=GenBank:WP_003419733.1;Name=WP_003419733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218195.1;locus_tag=DKM08_RS16210;product=RidA family protein;protein_id=WP_003419733.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 393064 393858 . + . ID=gene-DKM08_RS16215;Name=DKM08_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16215;old_locus_tag=DKM08_16195 NZ_QFYX01000002.1 Protein Homology CDS 393064 393858 . + 0 ID=cds-WP_003419731.1;Parent=gene-DKM08_RS16215;Dbxref=GenBank:WP_003419731.1;Name=WP_003419731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218194.1;locus_tag=DKM08_RS16215;product=MBL fold metallo-hydrolase;protein_id=WP_003419731.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 393964 394638 . - . ID=gene-DKM08_RS16220;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=DKM08_RS16220;old_locus_tag=DKM08_16200 NZ_QFYX01000002.1 Protein Homology CDS 393964 394638 . - 0 ID=cds-WP_003419728.1;Parent=gene-DKM08_RS16220;Dbxref=GenBank:WP_003419728.1;Name=WP_003419728.1;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218193.1;locus_tag=DKM08_RS16220;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_003419728.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 394737 395114 . - . ID=gene-DKM08_RS16225;Name=DKM08_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16225;old_locus_tag=DKM08_16205 NZ_QFYX01000002.1 Protein Homology CDS 394737 395114 . - 0 ID=cds-WP_003899635.1;Parent=gene-DKM08_RS16225;Dbxref=GenBank:WP_003899635.1;Name=WP_003899635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218192.1;locus_tag=DKM08_RS16225;product=hypothetical protein;protein_id=WP_003899635.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 395222 395959 . + . ID=gene-DKM08_RS16230;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=DKM08_RS16230;old_locus_tag=DKM08_16210 NZ_QFYX01000002.1 Protein Homology CDS 395222 395959 . + 0 ID=cds-WP_003419724.1;Parent=gene-DKM08_RS16230;Dbxref=GenBank:WP_003419724.1;Name=WP_003419724.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218191.2;locus_tag=DKM08_RS16230;product=endonuclease III;protein_id=WP_003419724.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 395995 396642 . + . ID=gene-DKM08_RS16235;Name=DKM08_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16235;old_locus_tag=DKM08_16215 NZ_QFYX01000002.1 Protein Homology CDS 395995 396642 . + 0 ID=cds-WP_003912310.1;Parent=gene-DKM08_RS16235;Dbxref=GenBank:WP_003912310.1;Name=WP_003912310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912310.1;locus_tag=DKM08_RS16235;product=TlpA family protein disulfide reductase;protein_id=WP_003912310.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 396774 397595 . + . ID=gene-DKM08_RS16240;Name=DKM08_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16240;old_locus_tag=DKM08_16220 NZ_QFYX01000002.1 Protein Homology CDS 396774 397595 . + 0 ID=cds-WP_003419718.1;Parent=gene-DKM08_RS16240;Dbxref=GenBank:WP_003419718.1;Name=WP_003419718.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218189.1;locus_tag=DKM08_RS16240;product=NUDIX hydrolase;protein_id=WP_003419718.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 397601 398794 . + . ID=gene-DKM08_RS16245;Name=marP;gbkey=Gene;gene=marP;gene_biotype=protein_coding;locus_tag=DKM08_RS16245;old_locus_tag=DKM08_16225 NZ_QFYX01000002.1 Protein Homology CDS 397601 398794 . + 0 ID=cds-WP_003419714.1;Parent=gene-DKM08_RS16245;Dbxref=GenBank:WP_003419714.1;Name=WP_003419714.1;gbkey=CDS;gene=marP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218188.1;locus_tag=DKM08_RS16245;product=acid resistance serine protease MarP;protein_id=WP_003419714.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 398787 399770 . - . ID=gene-DKM08_RS16250;Name=ephE;gbkey=Gene;gene=ephE;gene_biotype=protein_coding;locus_tag=DKM08_RS16250;old_locus_tag=DKM08_16230 NZ_QFYX01000002.1 Protein Homology CDS 398787 399770 . - 0 ID=cds-WP_003419712.1;Parent=gene-DKM08_RS16250;Dbxref=GenBank:WP_003419712.1;Name=WP_003419712.1;gbkey=CDS;gene=ephE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218187.1;locus_tag=DKM08_RS16250;product=alpha/beta fold hydrolase;protein_id=WP_003419712.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 399771 400289 . - . ID=gene-DKM08_RS16255;Name=DKM08_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16255;old_locus_tag=DKM08_16235 NZ_QFYX01000002.1 Protein Homology CDS 399771 400289 . - 0 ID=cds-WP_003419710.1;Parent=gene-DKM08_RS16255;Dbxref=GenBank:WP_003419710.1;Name=WP_003419710.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218186.1;locus_tag=DKM08_RS16255;product=phage holin family protein;protein_id=WP_003419710.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 400635 401333 . + . ID=gene-DKM08_RS16260;Name=DKM08_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16260;old_locus_tag=DKM08_16240 NZ_QFYX01000002.1 Protein Homology CDS 400635 401333 . + 0 ID=cds-WP_003419708.1;Parent=gene-DKM08_RS16260;Dbxref=GenBank:WP_003419708.1;Name=WP_003419708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218185.1;locus_tag=DKM08_RS16260;product=protease;protein_id=WP_003419708.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 401369 403324 . - . ID=gene-DKM08_RS16265;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=DKM08_RS16265;old_locus_tag=DKM08_16245 NZ_QFYX01000002.1 Protein Homology CDS 401369 403324 . - 0 ID=cds-WP_010950924.1;Parent=gene-DKM08_RS16265;Dbxref=GenBank:WP_010950924.1;Name=WP_010950924.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218184.1;locus_tag=DKM08_RS16265;product=acetate--CoA ligase;protein_id=WP_010950924.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 404032 405657 . + . ID=gene-DKM08_RS16275;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=DKM08_RS16275;old_locus_tag=DKM08_16255 NZ_QFYX01000002.1 Protein Homology CDS 404032 405657 . + 0 ID=cds-WP_010950923.1;Parent=gene-DKM08_RS16275;Dbxref=GenBank:WP_010950923.1;Name=WP_010950923.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=dppA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218183.1;locus_tag=DKM08_RS16275;product=peptide ABC transporter substrate-binding protein;protein_id=WP_010950923.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 405659 406585 . + . ID=gene-DKM08_RS16280;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=DKM08_RS16280;old_locus_tag=DKM08_16260 NZ_QFYX01000002.1 Protein Homology CDS 405659 406585 . + 0 ID=cds-WP_003419701.1;Parent=gene-DKM08_RS16280;Dbxref=GenBank:WP_003419701.1;Name=WP_003419701.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218182.1;locus_tag=DKM08_RS16280;product=ABC transporter permease;protein_id=WP_003419701.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 406578 407441 . + . ID=gene-DKM08_RS16285;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=DKM08_RS16285;old_locus_tag=DKM08_16265 NZ_QFYX01000002.1 Protein Homology CDS 406578 407441 . + 0 ID=cds-WP_003899628.1;Parent=gene-DKM08_RS16285;Dbxref=GenBank:WP_003899628.1;Name=WP_003899628.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=dppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020785225.1;locus_tag=DKM08_RS16285;product=ABC transporter permease;protein_id=WP_003899628.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 407438 409084 . + . ID=gene-DKM08_RS16290;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=DKM08_RS16290;old_locus_tag=DKM08_16270 NZ_QFYX01000002.1 Protein Homology CDS 407438 409084 . + 0 ID=cds-WP_003900733.1;Parent=gene-DKM08_RS16290;Dbxref=GenBank:WP_003900733.1;Name=WP_003900733.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=dppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218180.1;locus_tag=DKM08_RS16290;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003900733.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 409081 409851 . + . ID=gene-DKM08_RS16295;Name=DKM08_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16295;old_locus_tag=DKM08_16275 NZ_QFYX01000002.1 Protein Homology CDS 409081 409851 . + 0 ID=cds-WP_003419692.1;Parent=gene-DKM08_RS16295;Dbxref=GenBank:WP_003419692.1;Name=WP_003419692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218179.1;locus_tag=DKM08_RS16295;product=hypothetical protein;protein_id=WP_003419692.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 410606 411469 . - . ID=gene-DKM08_RS16305;Name=DKM08_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16305;old_locus_tag=DKM08_16285 NZ_QFYX01000002.1 Protein Homology CDS 410606 411469 . - 0 ID=cds-WP_010950922.1;Parent=gene-DKM08_RS16305;Dbxref=GenBank:WP_010950922.1;Name=WP_010950922.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218178.1;locus_tag=DKM08_RS16305;product=HAD-IB family hydrolase;protein_id=WP_010950922.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 411969 413021 . + . ID=gene-DKM08_RS16310;Name=ssd;gbkey=Gene;gene=ssd;gene_biotype=protein_coding;locus_tag=DKM08_RS16310;old_locus_tag=DKM08_16290 NZ_QFYX01000002.1 Protein Homology CDS 411969 413021 . + 0 ID=cds-WP_003419685.1;Parent=gene-DKM08_RS16310;Dbxref=GenBank:WP_003419685.1;Name=WP_003419685.1;gbkey=CDS;gene=ssd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218177.1;locus_tag=DKM08_RS16310;product=septum site-determining protein Ssd;protein_id=WP_003419685.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 413018 414181 . + . ID=gene-DKM08_RS16315;Name=DKM08_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16315;old_locus_tag=DKM08_16295 NZ_QFYX01000002.1 Protein Homology CDS 413018 414181 . + 0 ID=cds-WP_003899624.1;Parent=gene-DKM08_RS16315;Dbxref=GenBank:WP_003899624.1;Name=WP_003899624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899624.1;locus_tag=DKM08_RS16315;product=TadA family conjugal transfer-associated ATPase;protein_id=WP_003899624.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 414178 414978 . + . ID=gene-DKM08_RS16320;Name=DKM08_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16320;old_locus_tag=DKM08_16300 NZ_QFYX01000002.1 Protein Homology CDS 414178 414978 . + 0 ID=cds-WP_003419679.1;Parent=gene-DKM08_RS16320;Dbxref=GenBank:WP_003419679.1;Name=WP_003419679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218175.1;locus_tag=DKM08_RS16320;product=type II secretion system F family protein;protein_id=WP_003419679.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 414975 415577 . + . ID=gene-DKM08_RS16325;Name=DKM08_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16325;old_locus_tag=DKM08_16305 NZ_QFYX01000002.1 Protein Homology CDS 414975 415577 . + 0 ID=cds-WP_003899622.1;Parent=gene-DKM08_RS16325;Dbxref=GenBank:WP_003899622.1;Name=WP_003899622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456535.1;locus_tag=DKM08_RS16325;product=type II secretion system F family protein;protein_id=WP_003899622.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 415587 415793 . + . ID=gene-DKM08_RS16330;Name=DKM08_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16330;old_locus_tag=DKM08_16310 NZ_QFYX01000002.1 Protein Homology CDS 415587 415793 . + 0 ID=cds-WP_003419673.1;Parent=gene-DKM08_RS16330;Dbxref=GenBank:WP_003419673.1;Name=WP_003419673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218173.1;locus_tag=DKM08_RS16330;product=DUF4244 domain-containing protein;protein_id=WP_003419673.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 415817 416193 . + . ID=gene-DKM08_RS16335;Name=DKM08_RS16335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS16335;old_locus_tag=DKM08_16315;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 415817 416193 . + 0 ID=cds-DKM08_RS16335;Parent=gene-DKM08_RS16335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218172.1;locus_tag=DKM08_RS16335;product=apoptosis inhibitor;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 416148 416456 . + . ID=gene-DKM08_RS16340;Name=DKM08_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16340;old_locus_tag=DKM08_16320 NZ_QFYX01000002.1 Protein Homology CDS 416148 416456 . + 0 ID=cds-WP_012054375.1;Parent=gene-DKM08_RS16340;Dbxref=GenBank:WP_012054375.1;Name=WP_012054375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003925186.1;locus_tag=DKM08_RS16340;product=Rv3654c family TadE-like protein;protein_id=WP_012054375.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 416573 417286 . - . ID=gene-DKM08_RS16345;Name=DKM08_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16345;old_locus_tag=DKM08_16325 NZ_QFYX01000002.1 Protein Homology CDS 416573 417286 . - 0 ID=cds-WP_010950921.1;Parent=gene-DKM08_RS16345;Dbxref=GenBank:WP_010950921.1;Name=WP_010950921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177862.1;locus_tag=DKM08_RS16345;product=PGRS repeat-containing protein;protein_id=WP_010950921.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 417377 417894 . - . ID=gene-DKM08_RS22565;Name=DKM08_RS22565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22565;partial=true;pseudo=true;start_range=.,417377 NZ_QFYX01000002.1 Protein Homology CDS 417377 417894 . - 0 ID=cds-DKM08_RS22565;Parent=gene-DKM08_RS22565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=DKM08_RS22565;partial=true;product=PE family protein;pseudo=true;start_range=.,417377;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 418050 418205 . + . ID=gene-DKM08_RS21720;Name=DKM08_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21720 NZ_QFYX01000002.1 Protein Homology CDS 418050 418205 . + 0 ID=cds-WP_003917826.1;Parent=gene-DKM08_RS21720;Dbxref=GenBank:WP_003917826.1;Name=WP_003917826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291617.1;locus_tag=DKM08_RS21720;product=hypothetical protein;protein_id=WP_003917826.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 418348 419385 . - . ID=gene-DKM08_RS16360;Name=DKM08_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16360;old_locus_tag=DKM08_16340 NZ_QFYX01000002.1 Protein Homology CDS 418348 419385 . - 0 ID=cds-WP_003419657.1;Parent=gene-DKM08_RS16360;Dbxref=GenBank:WP_003419657.1;Name=WP_003419657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218168.1;locus_tag=DKM08_RS16360;product=PAS domain-containing protein;protein_id=WP_003419657.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 419709 419993 . - . ID=gene-DKM08_RS16365;Name=DKM08_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16365;old_locus_tag=DKM08_16345 NZ_QFYX01000002.1 Protein Homology CDS 419709 419993 . - 0 ID=cds-WP_147020923.1;Parent=gene-DKM08_RS16365;Dbxref=GenBank:WP_147020923.1;Name=WP_147020923.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178000.1;locus_tag=DKM08_RS16365;product=PE family protein;protein_id=WP_147020923.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 420130 422445 . - . ID=gene-DKM08_RS16370;Name=DKM08_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16370;old_locus_tag=DKM08_16350 NZ_QFYX01000002.1 Protein Homology CDS 420130 422445 . - 0 ID=cds-WP_003419652.1;Parent=gene-DKM08_RS16370;Dbxref=GenBank:WP_003419652.1;Name=WP_003419652.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218166.1;locus_tag=DKM08_RS16370;product=DEAD/DEAH box helicase;protein_id=WP_003419652.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 422695 422898 . + . ID=gene-DKM08_RS16375;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=DKM08_RS16375;old_locus_tag=DKM08_16355 NZ_QFYX01000002.1 Protein Homology CDS 422695 422898 . + 0 ID=cds-WP_003419650.1;Parent=gene-DKM08_RS16375;Dbxref=GenBank:WP_003419650.1;Name=WP_003419650.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218165.1;locus_tag=DKM08_RS16375;product=cold shock protein CspA;protein_id=WP_003419650.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 423038 423616 . + . ID=gene-DKM08_RS16380;Name=DKM08_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16380;old_locus_tag=DKM08_16360 NZ_QFYX01000002.1 Protein Homology CDS 423038 423616 . + 0 ID=cds-WP_003419642.1;Parent=gene-DKM08_RS16380;Dbxref=GenBank:WP_003419642.1;Name=WP_003419642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218164.1;locus_tag=DKM08_RS16380;product=hypothetical protein;protein_id=WP_003419642.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 423969 426773 . + . ID=gene-DKM08_RS16385;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=DKM08_RS16385;old_locus_tag=DKM08_16365 NZ_QFYX01000002.1 Protein Homology CDS 423969 426773 . + 0 ID=cds-WP_003899617.1;Parent=gene-DKM08_RS16385;Dbxref=GenBank:WP_003899617.1;Name=WP_003899617.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218163.1;locus_tag=DKM08_RS16385;product=type I DNA topoisomerase;protein_id=WP_003899617.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 426770 428419 . - . ID=gene-DKM08_RS16390;Name=DKM08_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16390;old_locus_tag=DKM08_16370 NZ_QFYX01000002.1 Protein Homology CDS 426770 428419 . - 0 ID=cds-WP_003419638.1;Parent=gene-DKM08_RS16390;Dbxref=GenBank:WP_003419638.1;Name=WP_003419638.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218162.1;locus_tag=DKM08_RS16390;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003419638.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 428505 429710 . + . ID=gene-DKM08_RS16395;Name=DKM08_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16395;old_locus_tag=DKM08_16375 NZ_QFYX01000002.1 Protein Homology CDS 428505 429710 . + 0 ID=cds-WP_003419637.1;Parent=gene-DKM08_RS16395;Dbxref=GenBank:WP_003419637.1;Name=WP_003419637.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218161.1;locus_tag=DKM08_RS16395;product=DNA polymerase III subunit delta';protein_id=WP_003419637.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 429789 429864 . + . ID=gene-DKM08_RS16400;Name=DKM08_RS16400;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS16400;old_locus_tag=DKM08_16380 NZ_QFYX01000002.1 tRNAscan-SE tRNA 429789 429864 . + . ID=rna-DKM08_RS16400;Parent=gene-DKM08_RS16400;anticodon=(pos:429822..429824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS16400;product=tRNA-Thr NZ_QFYX01000002.1 tRNAscan-SE exon 429789 429864 . + . ID=exon-DKM08_RS16400-1;Parent=rna-DKM08_RS16400;anticodon=(pos:429822..429824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS16400;product=tRNA-Thr NZ_QFYX01000002.1 RefSeq gene 429875 430066 . - . ID=gene-DKM08_RS16405;Name=DKM08_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16405;old_locus_tag=DKM08_16385 NZ_QFYX01000002.1 Protein Homology CDS 429875 430066 . - 0 ID=cds-WP_003419633.1;Parent=gene-DKM08_RS16405;Dbxref=GenBank:WP_003419633.1;Name=WP_003419633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218160.1;locus_tag=DKM08_RS16405;product=hypothetical protein;protein_id=WP_003419633.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 430162 430296 . - . ID=gene-DKM08_RS22445;Name=DKM08_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22445 NZ_QFYX01000002.1 Protein Homology CDS 430162 430296 . - 0 ID=cds-WP_003419630.1;Parent=gene-DKM08_RS22445;Dbxref=GenBank:WP_003419630.1;Name=WP_003419630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419630.1;locus_tag=DKM08_RS22445;product=hypothetical protein;protein_id=WP_003419630.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 430461 430655 . + . ID=gene-DKM08_RS16410;Name=DKM08_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16410;old_locus_tag=DKM08_16390 NZ_QFYX01000002.1 Protein Homology CDS 430461 430655 . + 0 ID=cds-WP_003419627.1;Parent=gene-DKM08_RS16410;Dbxref=GenBank:WP_003419627.1;Name=WP_003419627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218159.1;locus_tag=DKM08_RS16410;product=antitoxin VbhA family protein;protein_id=WP_003419627.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 430666 431301 . + . ID=gene-DKM08_RS16415;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=DKM08_RS16415;old_locus_tag=DKM08_16395 NZ_QFYX01000002.1 Protein Homology CDS 430666 431301 . + 0 ID=cds-WP_003899616.1;Parent=gene-DKM08_RS16415;Dbxref=GenBank:WP_003899616.1;Name=WP_003899616.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=fic;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218158.1;locus_tag=DKM08_RS16415;product=Fic/DOC family protein;protein_id=WP_003899616.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 431477 432706 . + . ID=gene-DKM08_RS16420;Name=DKM08_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16420;old_locus_tag=DKM08_16400 NZ_QFYX01000002.1 Protein Homology CDS 431477 432706 . + 0 ID=cds-WP_003419623.1;Parent=gene-DKM08_RS16420;Dbxref=GenBank:WP_003419623.1;Name=WP_003419623.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218157.1;locus_tag=DKM08_RS16420;product=IS256-like element IS1553 family transposase;protein_id=WP_003419623.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 433025 433120 . - . ID=gene-DKM08_RS22810;Name=DKM08_RS22810;end_range=433120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22810;partial=true;pseudo=true;start_range=.,433025 NZ_QFYX01000002.1 Protein Homology CDS 433025 433120 . - 0 ID=cds-DKM08_RS22810;Parent=gene-DKM08_RS22810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=433120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=DKM08_RS22810;partial=true;product=hypothetical protein;pseudo=true;start_range=.,433025;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 433496 434242 . - . ID=gene-DKM08_RS16430;Name=DKM08_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16430;old_locus_tag=DKM08_16410 NZ_QFYX01000002.1 Protein Homology CDS 433496 434242 . - 0 ID=cds-WP_003899614.1;Parent=gene-DKM08_RS16430;Dbxref=GenBank:WP_003899614.1;Name=WP_003899614.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218155.1;locus_tag=DKM08_RS16430;product=ATP-binding protein;protein_id=WP_003899614.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 434242 435474 . - . ID=gene-DKM08_RS16435;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=DKM08_RS16435;old_locus_tag=DKM08_16415;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 434242 435474 . - 0 ID=cds-DKM08_RS16435;Parent=gene-DKM08_RS16435;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=DKM08_RS16435;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 435817 437592 . - . ID=gene-DKM08_RS16440;Name=DKM08_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16440;old_locus_tag=DKM08_16420 NZ_QFYX01000002.1 Protein Homology CDS 435817 437592 . - 0 ID=cds-WP_003419613.1;Parent=gene-DKM08_RS16440;Dbxref=GenBank:WP_003419613.1;Name=WP_003419613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218152.1;locus_tag=DKM08_RS16440;product=hypothetical protein;protein_id=WP_003419613.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 437615 438559 . + . ID=gene-DKM08_RS16445;Name=galE1;gbkey=Gene;gene=galE1;gene_biotype=protein_coding;locus_tag=DKM08_RS16445;old_locus_tag=DKM08_16425 NZ_QFYX01000002.1 Protein Homology CDS 437615 438559 . + 0 ID=cds-WP_003419610.1;Parent=gene-DKM08_RS16445;Dbxref=GenBank:WP_003419610.1;Name=WP_003419610.1;gbkey=CDS;gene=galE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215015.2;locus_tag=DKM08_RS16445;product=UDP-glucose 4-epimerase;protein_id=WP_003419610.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 438560 439435 . - . ID=gene-DKM08_RS16450;Name=DKM08_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16450;old_locus_tag=DKM08_16430 NZ_QFYX01000002.1 Protein Homology CDS 438560 439435 . - 0 ID=cds-WP_023349633.1;Parent=gene-DKM08_RS16450;Dbxref=GenBank:WP_023349633.1;Name=WP_023349633.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218150.1;locus_tag=DKM08_RS16450;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_023349633.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 439646 439990 . - . ID=gene-DKM08_RS16455;Name=DKM08_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16455;old_locus_tag=DKM08_16435 NZ_QFYX01000002.1 Protein Homology CDS 439646 439990 . - 0 ID=cds-WP_003419590.1;Parent=gene-DKM08_RS16455;Dbxref=GenBank:WP_003419590.1;Name=WP_003419590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218149.1;locus_tag=DKM08_RS16455;product=DUF2304 domain-containing protein;protein_id=WP_003419590.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 439987 440712 . - . ID=gene-DKM08_RS16460;Name=DKM08_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16460;old_locus_tag=DKM08_16440 NZ_QFYX01000002.1 Protein Homology CDS 439987 440712 . - 0 ID=cds-WP_003419585.1;Parent=gene-DKM08_RS16460;Dbxref=GenBank:WP_003419585.1;Name=WP_003419585.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218148.1;locus_tag=DKM08_RS16460;product=glycosyltransferase family 2 protein;protein_id=WP_003419585.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 440756 442051 . - . ID=gene-DKM08_RS16465;Name=DKM08_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16465;old_locus_tag=DKM08_16445 NZ_QFYX01000002.1 Protein Homology CDS 440756 442051 . - 0 ID=cds-WP_003419582.1;Parent=gene-DKM08_RS16465;Dbxref=GenBank:WP_003419582.1;Name=WP_003419582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218147.1;locus_tag=DKM08_RS16465;product=hypothetical protein;protein_id=WP_003419582.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 442172 443269 . + . ID=gene-DKM08_RS16470;Name=DKM08_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16470;old_locus_tag=DKM08_16450 NZ_QFYX01000002.1 Protein Homology CDS 442172 443269 . + 0 ID=cds-WP_003419580.1;Parent=gene-DKM08_RS16470;Dbxref=GenBank:WP_003419580.1;Name=WP_003419580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218146.1;locus_tag=DKM08_RS16470;product=DUF475 domain-containing protein;protein_id=WP_003419580.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 443315 443803 . - . ID=gene-DKM08_RS16475;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=DKM08_RS16475;old_locus_tag=DKM08_16455 NZ_QFYX01000002.1 Protein Homology CDS 443315 443803 . - 0 ID=cds-WP_003419577.1;Parent=gene-DKM08_RS16475;Dbxref=GenBank:WP_003419577.1;Name=WP_003419577.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218145.1;locus_tag=DKM08_RS16475;product=inorganic diphosphatase;protein_id=WP_003419577.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 443941 445326 . + . ID=gene-DKM08_RS16480;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=DKM08_RS16480;old_locus_tag=DKM08_16460 NZ_QFYX01000002.1 Protein Homology CDS 443941 445326 . + 0 ID=cds-WP_003419574.1;Parent=gene-DKM08_RS16480;Dbxref=GenBank:WP_003419574.1;Name=WP_003419574.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218144.1;locus_tag=DKM08_RS16480;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_003419574.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 445323 446375 . + . ID=gene-DKM08_RS16485;Name=DKM08_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16485;old_locus_tag=DKM08_16465 NZ_QFYX01000002.1 Protein Homology CDS 445323 446375 . + 0 ID=cds-WP_003419571.1;Parent=gene-DKM08_RS16485;Dbxref=GenBank:WP_003419571.1;Name=WP_003419571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218143.1;locus_tag=DKM08_RS16485;product=zinc-dependent metalloprotease;protein_id=WP_003419571.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 446354 447325 . + . ID=gene-DKM08_RS16490;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=DKM08_RS16490;old_locus_tag=DKM08_16470 NZ_QFYX01000002.1 Protein Homology CDS 446354 447325 . + 0 ID=cds-WP_003899608.1;Parent=gene-DKM08_RS16490;Dbxref=GenBank:WP_003899608.1;Name=WP_003899608.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218142.1;locus_tag=DKM08_RS16490;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_003899608.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 447322 447972 . + . ID=gene-DKM08_RS16495;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=DKM08_RS16495;old_locus_tag=DKM08_16475 NZ_QFYX01000002.1 Protein Homology CDS 447322 447972 . + 0 ID=cds-WP_003419558.1;Parent=gene-DKM08_RS16495;Dbxref=GenBank:WP_003419558.1;Name=WP_003419558.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218141.1;locus_tag=DKM08_RS16495;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_003419558.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 447977 448537 . - . ID=gene-DKM08_RS16500;Name=DKM08_RS16500;end_range=448537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS16500;old_locus_tag=DKM08_16480;partial=true;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 447977 448537 . - 0 ID=cds-DKM08_RS16500;Parent=gene-DKM08_RS16500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=448537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013830827.1;locus_tag=DKM08_RS16500;partial=true;product=SIMPL domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 448958 450136 . + . ID=gene-DKM08_RS16510;Name=espA;gbkey=Gene;gene=espA;gene_biotype=protein_coding;locus_tag=DKM08_RS16510;old_locus_tag=DKM08_16490 NZ_QFYX01000002.1 Protein Homology CDS 448958 450136 . + 0 ID=cds-WP_003419551.1;Parent=gene-DKM08_RS16510;Dbxref=GenBank:WP_003419551.1;Name=WP_003419551.1;gbkey=CDS;gene=espA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218133.1;locus_tag=DKM08_RS16510;product=type VII secretion system ESX-1 target EspA;protein_id=WP_003419551.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 450210 450521 . + . ID=gene-DKM08_RS16515;Name=espC;gbkey=Gene;gene=espC;gene_biotype=protein_coding;locus_tag=DKM08_RS16515;old_locus_tag=DKM08_16495 NZ_QFYX01000002.1 Protein Homology CDS 450210 450521 . + 0 ID=cds-WP_003899599.1;Parent=gene-DKM08_RS16515;Dbxref=GenBank:WP_003899599.1;Name=WP_003899599.1;gbkey=CDS;gene=espC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218132.1;locus_tag=DKM08_RS16515;product=type VII secretion system ESX-1 filament-forming target EspC;protein_id=WP_003899599.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 450637 451191 . + . ID=gene-DKM08_RS16520;Name=espD;gbkey=Gene;gene=espD;gene_biotype=protein_coding;locus_tag=DKM08_RS16520;old_locus_tag=DKM08_16500 NZ_QFYX01000002.1 Protein Homology CDS 450637 451191 . + 0 ID=cds-WP_003419545.1;Parent=gene-DKM08_RS16520;Dbxref=GenBank:WP_003419545.1;Name=WP_003419545.1;gbkey=CDS;gene=espD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218131.1;locus_tag=DKM08_RS16520;product=type VII secretion system ESX-1 target EspD;protein_id=WP_003419545.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 451291 451452 . + . ID=gene-DKM08_RS16525;Name=DKM08_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16525;old_locus_tag=DKM08_16505 NZ_QFYX01000002.1 Protein Homology CDS 451291 451452 . + 0 ID=cds-WP_003902532.1;Parent=gene-DKM08_RS16525;Dbxref=GenBank:WP_003902532.1;Name=WP_003902532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218130.1;locus_tag=DKM08_RS16525;product=hypothetical protein;protein_id=WP_003902532.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 452339 454621 . + . ID=gene-DKM08_RS16540;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=DKM08_RS16540;old_locus_tag=DKM08_16520 NZ_QFYX01000002.1 Protein Homology CDS 452339 454621 . + 0 ID=cds-WP_003419543.1;Parent=gene-DKM08_RS16540;Dbxref=GenBank:WP_003419543.1;Name=WP_003419543.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218127.1;locus_tag=DKM08_RS16540;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_003419543.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 454637 455245 . + . ID=gene-DKM08_RS16545;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=DKM08_RS16545;old_locus_tag=DKM08_16525 NZ_QFYX01000002.1 Protein Homology CDS 454637 455245 . + 0 ID=cds-WP_003899597.1;Parent=gene-DKM08_RS16545;Dbxref=GenBank:WP_003899597.1;Name=WP_003899597.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218126.1;locus_tag=DKM08_RS16545;product=GTP cyclohydrolase I FolE;protein_id=WP_003899597.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 455242 456084 . + . ID=gene-DKM08_RS16550;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=DKM08_RS16550;old_locus_tag=DKM08_16530 NZ_QFYX01000002.1 Protein Homology CDS 455242 456084 . + 0 ID=cds-WP_003899596.1;Parent=gene-DKM08_RS16550;Dbxref=GenBank:WP_003899596.1;Name=WP_003899596.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177997.1;locus_tag=DKM08_RS16550;product=dihydropteroate synthase;protein_id=WP_003899596.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 456077 456478 . + . ID=gene-DKM08_RS16555;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=DKM08_RS16555;old_locus_tag=DKM08_16535 NZ_QFYX01000002.1 Protein Homology CDS 456077 456478 . + 0 ID=cds-WP_003419537.1;Parent=gene-DKM08_RS16555;Dbxref=GenBank:WP_003419537.1;Name=WP_003419537.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177996.1;locus_tag=DKM08_RS16555;product=dihydroneopterin aldolase;protein_id=WP_003419537.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 456475 457041 . + . ID=gene-DKM08_RS16560;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=DKM08_RS16560;old_locus_tag=DKM08_16540 NZ_QFYX01000002.1 Protein Homology CDS 456475 457041 . + 0 ID=cds-WP_003419536.1;Parent=gene-DKM08_RS16560;Dbxref=GenBank:WP_003419536.1;Name=WP_003419536.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218123.1;locus_tag=DKM08_RS16560;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_003419536.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 457041 457517 . + . ID=gene-DKM08_RS16565;Name=DKM08_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16565;old_locus_tag=DKM08_16545 NZ_QFYX01000002.1 Protein Homology CDS 457041 457517 . + 0 ID=cds-WP_003419535.1;Parent=gene-DKM08_RS16565;Dbxref=GenBank:WP_003419535.1;Name=WP_003419535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218122.1;locus_tag=DKM08_RS16565;product=DUF3180 domain-containing protein;protein_id=WP_003419535.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 457726 458919 . + . ID=gene-DKM08_RS16570;Name=DKM08_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16570;old_locus_tag=DKM08_16550 NZ_QFYX01000002.1 Protein Homology CDS 457726 458919 . + 0 ID=cds-WP_003419534.1;Parent=gene-DKM08_RS16570;Dbxref=GenBank:WP_003419534.1;Name=WP_003419534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218121.2;locus_tag=DKM08_RS16570;product=DUF6779 domain-containing protein;protein_id=WP_003419534.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 459104 460015 . + . ID=gene-DKM08_RS16575;Name=DKM08_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16575;old_locus_tag=DKM08_16555 NZ_QFYX01000002.1 Protein Homology CDS 459104 460015 . + 0 ID=cds-WP_003419533.1;Parent=gene-DKM08_RS16575;Dbxref=GenBank:WP_003419533.1;Name=WP_003419533.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218120.1;locus_tag=DKM08_RS16575;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_003419533.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 460012 460941 . + . ID=gene-DKM08_RS16580;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=DKM08_RS16580;old_locus_tag=DKM08_16560 NZ_QFYX01000002.1 Protein Homology CDS 460012 460941 . + 0 ID=cds-WP_003419526.1;Parent=gene-DKM08_RS16580;Dbxref=GenBank:WP_003419526.1;Name=WP_003419526.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218119.1;locus_tag=DKM08_RS16580;product=pantoate--beta-alanine ligase;protein_id=WP_003419526.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 460941 461360 . + . ID=gene-DKM08_RS16585;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=DKM08_RS16585;old_locus_tag=DKM08_16565 NZ_QFYX01000002.1 Protein Homology CDS 460941 461360 . + 0 ID=cds-WP_003419523.1;Parent=gene-DKM08_RS16585;Dbxref=GenBank:WP_003419523.1;Name=WP_003419523.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218118.1;locus_tag=DKM08_RS16585;product=aspartate 1-decarboxylase;protein_id=WP_003419523.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 461363 462181 . + . ID=gene-DKM08_RS16590;Name=DKM08_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16590;old_locus_tag=DKM08_16570 NZ_QFYX01000002.1 Protein Homology CDS 461363 462181 . + 0 ID=cds-WP_003419517.1;Parent=gene-DKM08_RS16590;Dbxref=GenBank:WP_003419517.1;Name=WP_003419517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218117.1;locus_tag=DKM08_RS16590;product=type III pantothenate kinase;protein_id=WP_003419517.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 462282 463799 . + . ID=gene-DKM08_RS16600;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=DKM08_RS16600;old_locus_tag=DKM08_16580 NZ_QFYX01000002.1 Protein Homology CDS 462282 463799 . + 0 ID=cds-WP_003419514.1;Parent=gene-DKM08_RS16600;Dbxref=GenBank:WP_003419514.1;Name=WP_003419514.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218115.1;locus_tag=DKM08_RS16600;product=lysine--tRNA ligase;protein_id=WP_003419514.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 463903 464241 . + . ID=gene-DKM08_RS16605;Name=lsr2;gbkey=Gene;gene=lsr2;gene_biotype=protein_coding;locus_tag=DKM08_RS16605;old_locus_tag=DKM08_16585 NZ_QFYX01000002.1 Protein Homology CDS 463903 464241 . + 0 ID=cds-WP_003419513.1;Parent=gene-DKM08_RS16605;Dbxref=GenBank:WP_003419513.1;Name=WP_003419513.1;gbkey=CDS;gene=lsr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218114.1;locus_tag=DKM08_RS16605;product=histone-like nucleoid-structuring protein Lsr2;protein_id=WP_003419513.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 464518 467064 . + . ID=gene-DKM08_RS16610;Name=clpC1;gbkey=Gene;gene=clpC1;gene_biotype=protein_coding;locus_tag=DKM08_RS16610;old_locus_tag=DKM08_16590 NZ_QFYX01000002.1 Protein Homology CDS 464518 467064 . + 0 ID=cds-WP_003419511.1;Parent=gene-DKM08_RS16610;Dbxref=GenBank:WP_003419511.1;Name=WP_003419511.1;gbkey=CDS;gene=clpC1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177995.1;locus_tag=DKM08_RS16610;product=ATP-dependent protease ATP-binding subunit ClpC;protein_id=WP_003419511.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 467172 468517 . + . ID=gene-DKM08_RS16615;Name=DKM08_RS16615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS16615;old_locus_tag=DKM08_16595;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 467172 468517 . + 0 ID=cds-DKM08_RS16615;Parent=gene-DKM08_RS16615;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177994.1;locus_tag=DKM08_RS16615;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 468564 469391 . - . ID=gene-DKM08_RS16620;Name=DKM08_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16620;old_locus_tag=DKM08_16600 NZ_QFYX01000002.1 Protein Homology CDS 468564 469391 . - 0 ID=cds-WP_003419504.1;Parent=gene-DKM08_RS16620;Dbxref=GenBank:WP_003419504.1;Name=WP_003419504.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218111.1;locus_tag=DKM08_RS16620;product=peptidoglycan recognition protein family protein;protein_id=WP_003419504.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 469538 470896 . - . ID=gene-DKM08_RS16625;Name=lpqF;gbkey=Gene;gene=lpqF;gene_biotype=protein_coding;locus_tag=DKM08_RS16625;old_locus_tag=DKM08_16605 NZ_QFYX01000002.1 Protein Homology CDS 469538 470896 . - 0 ID=cds-WP_010950918.1;Parent=gene-DKM08_RS16625;Dbxref=GenBank:WP_010950918.1;Name=WP_010950918.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=lpqF;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218110.1;locus_tag=DKM08_RS16625;product=serine hydrolase;protein_id=WP_010950918.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 470874 471191 . - . ID=gene-DKM08_RS16630;Name=mhuD;gbkey=Gene;gene=mhuD;gene_biotype=protein_coding;locus_tag=DKM08_RS16630;old_locus_tag=DKM08_16610 NZ_QFYX01000002.1 Protein Homology CDS 470874 471191 . - 0 ID=cds-WP_003419501.1;Parent=gene-DKM08_RS16630;Dbxref=GenBank:WP_003419501.1;Name=WP_003419501.1;gbkey=CDS;gene=mhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218109.1;locus_tag=DKM08_RS16630;product=mycobilin-forming heme oxygenase MhuD;protein_id=WP_003419501.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 471206 471979 . + . ID=gene-DKM08_RS16635;Name=DKM08_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16635;old_locus_tag=DKM08_16615 NZ_QFYX01000002.1 Protein Homology CDS 471206 471979 . + 0 ID=cds-WP_003419499.1;Parent=gene-DKM08_RS16635;Dbxref=GenBank:WP_003419499.1;Name=WP_003419499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218108.1;locus_tag=DKM08_RS16635;product=alpha/beta fold hydrolase;protein_id=WP_003419499.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 472090 473844 . + . ID=gene-DKM08_RS16640;Name=DKM08_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16640;old_locus_tag=DKM08_16620 NZ_QFYX01000002.1 Protein Homology CDS 472090 473844 . + 0 ID=cds-WP_010886177.1;Parent=gene-DKM08_RS16640;Dbxref=GenBank:WP_010886177.1;Name=WP_010886177.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177993.1;locus_tag=DKM08_RS16640;product=PE family protein;protein_id=WP_010886177.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 473841 474755 . - . ID=gene-DKM08_RS16645;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=DKM08_RS16645;old_locus_tag=DKM08_16625 NZ_QFYX01000002.1 Protein Homology CDS 473841 474755 . - 0 ID=cds-WP_003419495.1;Parent=gene-DKM08_RS16645;Dbxref=GenBank:WP_003419495.1;Name=WP_003419495.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218106.1;locus_tag=DKM08_RS16645;product=A/G-specific adenine glycosylase;protein_id=WP_003419495.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 474754 475377 . + . ID=gene-DKM08_RS16650;Name=canB;gbkey=Gene;gene=canB;gene_biotype=protein_coding;locus_tag=DKM08_RS16650;old_locus_tag=DKM08_16630 NZ_QFYX01000002.1 Protein Homology CDS 474754 475377 . + 0 ID=cds-WP_010950917.1;Parent=gene-DKM08_RS16650;Dbxref=GenBank:WP_010950917.1;Name=WP_010950917.1;gbkey=CDS;gene=canB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218105.1;locus_tag=DKM08_RS16650;product=beta-carbonic anhydrase CanB;protein_id=WP_010950917.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 475486 476277 . + . ID=gene-DKM08_RS16655;Name=DKM08_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16655;old_locus_tag=DKM08_16635 NZ_QFYX01000002.1 Protein Homology CDS 475486 476277 . + 0 ID=cds-WP_011799360.1;Parent=gene-DKM08_RS16655;Dbxref=GenBank:WP_011799360.1;Name=WP_011799360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218104.1;locus_tag=DKM08_RS16655;product=hypothetical protein;protein_id=WP_011799360.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 476278 477354 . - . ID=gene-DKM08_RS16660;Name=disA;gbkey=Gene;gene=disA;gene_biotype=pseudogene;locus_tag=DKM08_RS16660;old_locus_tag=DKM08_16640;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 476278 477354 . - 0 ID=cds-DKM08_RS16660;Parent=gene-DKM08_RS16660;Note=internal stop;gbkey=CDS;gene=disA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218103.1;locus_tag=DKM08_RS16660;product=DNA integrity scanning diadenylate cyclase DisA;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 477359 478801 . - . ID=gene-DKM08_RS16665;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=DKM08_RS16665;old_locus_tag=DKM08_16645 NZ_QFYX01000002.1 Protein Homology CDS 477359 478801 . - 0 ID=cds-WP_003419487.1;Parent=gene-DKM08_RS16665;Dbxref=GenBank:WP_003419487.1;Name=WP_003419487.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218102.1;locus_tag=DKM08_RS16665;product=DNA repair protein RadA;protein_id=WP_003419487.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 478867 479415 . - . ID=gene-DKM08_RS16670;Name=DKM08_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16670;old_locus_tag=DKM08_16650 NZ_QFYX01000002.1 Protein Homology CDS 478867 479415 . - 0 ID=cds-WP_003900715.1;Parent=gene-DKM08_RS16670;Dbxref=GenBank:WP_003900715.1;Name=WP_003900715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218101.1;locus_tag=DKM08_RS16670;product=hypothetical protein;protein_id=WP_003900715.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 479700 480188 . + . ID=gene-DKM08_RS16675;Name=carD;gbkey=Gene;gene=carD;gene_biotype=protein_coding;locus_tag=DKM08_RS16675;old_locus_tag=DKM08_16655 NZ_QFYX01000002.1 Protein Homology CDS 479700 480188 . + 0 ID=cds-WP_003419482.1;Parent=gene-DKM08_RS16675;Dbxref=GenBank:WP_003419482.1;Name=WP_003419482.1;gbkey=CDS;gene=carD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218100.1;locus_tag=DKM08_RS16675;product=RNA polymerase-binding transcription factor CarD;protein_id=WP_003419482.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 480205 480900 . + . ID=gene-DKM08_RS16680;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=DKM08_RS16680;old_locus_tag=DKM08_16660 NZ_QFYX01000002.1 Protein Homology CDS 480205 480900 . + 0 ID=cds-WP_010950915.1;Parent=gene-DKM08_RS16680;Dbxref=GenBank:WP_010950915.1;Name=WP_010950915.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218099.1;locus_tag=DKM08_RS16680;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_010950915.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 480897 481376 . + . ID=gene-DKM08_RS16685;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=DKM08_RS16685;old_locus_tag=DKM08_16665 NZ_QFYX01000002.1 Protein Homology CDS 480897 481376 . + 0 ID=cds-WP_003419432.1;Parent=gene-DKM08_RS16685;Dbxref=GenBank:WP_003419432.1;Name=WP_003419432.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218098.1;locus_tag=DKM08_RS16685;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_003419432.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 481441 482850 . + . ID=gene-DKM08_RS16690;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=DKM08_RS16690;old_locus_tag=DKM08_16670 NZ_QFYX01000002.1 Protein Homology CDS 481441 482850 . + 0 ID=cds-WP_003900108.1;Parent=gene-DKM08_RS16690;Dbxref=GenBank:WP_003900108.1;Name=WP_003900108.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177992.1;locus_tag=DKM08_RS16690;product=cysteine--tRNA ligase;protein_id=WP_003900108.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 482851 483819 . + . ID=gene-DKM08_RS16695;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=DKM08_RS16695;old_locus_tag=DKM08_16675 NZ_QFYX01000002.1 Protein Homology CDS 482851 483819 . + 0 ID=cds-WP_003419423.1;Parent=gene-DKM08_RS16695;Dbxref=GenBank:WP_003419423.1;Name=WP_003419423.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218096.1;locus_tag=DKM08_RS16695;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_003419423.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 483861 485102 . - . ID=gene-DKM08_RS16700;Name=DKM08_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16700;old_locus_tag=DKM08_16680 NZ_QFYX01000002.1 Protein Homology CDS 483861 485102 . - 0 ID=cds-WP_010950913.1;Parent=gene-DKM08_RS16700;Dbxref=GenBank:WP_010950913.1;Name=WP_010950913.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218095.1;locus_tag=DKM08_RS16700;product=SLC13 family permease;protein_id=WP_010950913.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 485116 486036 . - . ID=gene-DKM08_RS16705;Name=DKM08_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16705;old_locus_tag=DKM08_16685 NZ_QFYX01000002.1 Protein Homology CDS 485116 486036 . - 0 ID=cds-WP_003900106.1;Parent=gene-DKM08_RS16705;Dbxref=GenBank:WP_003900106.1;Name=WP_003900106.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900106.1;locus_tag=DKM08_RS16705;product=MBL fold metallo-hydrolase;protein_id=WP_003900106.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 486173 486886 . - . ID=gene-DKM08_RS16710;Name=lppH;gbkey=Gene;gene=lppH;gene_biotype=protein_coding;locus_tag=DKM08_RS16710;old_locus_tag=DKM08_16690 NZ_QFYX01000002.1 Protein Homology CDS 486173 486886 . - 0 ID=cds-WP_010950912.1;Parent=gene-DKM08_RS16710;Dbxref=GenBank:WP_010950912.1;Name=WP_010950912.1;gbkey=CDS;gene=lppH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177991.1;locus_tag=DKM08_RS16710;product=sensor domain-containing protein;protein_id=WP_010950912.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 487076 488155 . + . ID=gene-DKM08_RS16715;Name=DKM08_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16715;old_locus_tag=DKM08_16695 NZ_QFYX01000002.1 Protein Homology CDS 487076 488155 . + 0 ID=cds-WP_003419400.1;Parent=gene-DKM08_RS16715;Dbxref=GenBank:WP_003419400.1;Name=WP_003419400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218092.1;locus_tag=DKM08_RS16715;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_003419400.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 488161 488760 . - . ID=gene-DKM08_RS16720;Name=kstR;gbkey=Gene;gene=kstR;gene_biotype=protein_coding;locus_tag=DKM08_RS16720;old_locus_tag=DKM08_16700 NZ_QFYX01000002.1 Protein Homology CDS 488161 488760 . - 0 ID=cds-WP_003419397.1;Parent=gene-DKM08_RS16720;Dbxref=GenBank:WP_003419397.1;Name=WP_003419397.1;Ontology_term=GO:0003677;gbkey=CDS;gene=kstR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218091.3;locus_tag=DKM08_RS16720;product=cholesterol catabolism transcriptional regulator KstR;protein_id=WP_003419397.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 489032 491167 . + . ID=gene-DKM08_RS16725;Name=DKM08_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16725;old_locus_tag=DKM08_16705 NZ_QFYX01000002.1 Protein Homology CDS 489032 491167 . + 0 ID=cds-WP_003419394.1;Parent=gene-DKM08_RS16725;Dbxref=GenBank:WP_003419394.1;Name=WP_003419394.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218090.1;locus_tag=DKM08_RS16725;product=acyl-CoA dehydrogenase;protein_id=WP_003419394.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 491203 491733 . - . ID=gene-DKM08_RS16730;Name=DKM08_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16730;old_locus_tag=DKM08_16710 NZ_QFYX01000002.1 Protein Homology CDS 491203 491733 . - 0 ID=cds-WP_003419389.1;Parent=gene-DKM08_RS16730;Dbxref=GenBank:WP_003419389.1;Name=WP_003419389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218089.1;locus_tag=DKM08_RS16730;product=hypothetical protein;protein_id=WP_003419389.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 491751 492827 . - . ID=gene-DKM08_RS16735;Name=kshB;gbkey=Gene;gene=kshB;gene_biotype=protein_coding;locus_tag=DKM08_RS16735;old_locus_tag=DKM08_16715 NZ_QFYX01000002.1 Protein Homology CDS 491751 492827 . - 0 ID=cds-WP_003900102.1;Parent=gene-DKM08_RS16735;Dbxref=GenBank:WP_003900102.1;Name=WP_003900102.1;gbkey=CDS;gene=kshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218088.1;locus_tag=DKM08_RS16735;product=3-ketosteroid-9-alpha-hydroxylase reductase subunit;protein_id=WP_003900102.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 492974 494158 . + . ID=gene-DKM08_RS16740;Name=hsaA;gbkey=Gene;gene=hsaA;gene_biotype=protein_coding;locus_tag=DKM08_RS16740;old_locus_tag=DKM08_16720 NZ_QFYX01000002.1 Protein Homology CDS 492974 494158 . + 0 ID=cds-WP_003419383.1;Parent=gene-DKM08_RS16740;Dbxref=GenBank:WP_003419383.1;Name=WP_003419383.1;Ontology_term=GO:0009056,GO:0016042,GO:0036383;gbkey=CDS;gene=hsaA;go_function=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase activity|0036383||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218087.1;locus_tag=DKM08_RS16740;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase oxygenase subunit;protein_id=WP_003419383.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 494173 495048 . + . ID=gene-DKM08_RS16745;Name=hsaD;gbkey=Gene;gene=hsaD;gene_biotype=protein_coding;gene_synonym=bphD;locus_tag=DKM08_RS16745;old_locus_tag=DKM08_16725 NZ_QFYX01000002.1 Protein Homology CDS 494173 495048 . + 0 ID=cds-WP_003419381.1;Parent=gene-DKM08_RS16745;Dbxref=GenBank:WP_003419381.1;Name=WP_003419381.1;Ontology_term=GO:0009056,GO:0016042,GO:0102296;gbkey=CDS;gene=hsaD;go_function=4%2C5-9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase activity|0102296||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218086.1;locus_tag=DKM08_RS16745;product=4%2C5:9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase;protein_id=WP_003419381.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 495045 495947 . + . ID=gene-DKM08_RS16750;Name=hsaC;gbkey=Gene;gene=hsaC;gene_biotype=protein_coding;gene_synonym=bphC;locus_tag=DKM08_RS16750;old_locus_tag=DKM08_16730 NZ_QFYX01000002.1 Protein Homology CDS 495045 495947 . + 0 ID=cds-WP_003419378.1;Parent=gene-DKM08_RS16750;Dbxref=GenBank:WP_003419378.1;Name=WP_003419378.1;Ontology_term=GO:0009056,GO:0016042,GO:0047071;gbkey=CDS;gene=hsaC;go_function=3%2C4-dihydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione 4%2C5-dioxygenase activity|0047071||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218085.1;locus_tag=DKM08_RS16750;product=iron-dependent extradiol dioxygenase HsaC;protein_id=WP_003419378.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 495962 496525 . + . ID=gene-DKM08_RS16755;Name=hsaB;gbkey=Gene;gene=hsaB;gene_biotype=protein_coding;locus_tag=DKM08_RS16755;old_locus_tag=DKM08_16735 NZ_QFYX01000002.1 Protein Homology CDS 495962 496525 . + 0 ID=cds-WP_003419374.1;Parent=gene-DKM08_RS16755;Dbxref=GenBank:WP_003419374.1;Name=WP_003419374.1;Ontology_term=GO:0009056,GO:0016042,GO:0036382;gbkey=CDS;gene=hsaB;go_function=flavin reductase (NADH) activity|0036382||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218084.1;locus_tag=DKM08_RS16755;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase reductase subunit;protein_id=WP_003419374.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 496610 496780 . + . ID=gene-DKM08_RS21725;Name=DKM08_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21725 NZ_QFYX01000002.1 Protein Homology CDS 496610 496780 . + 0 ID=cds-WP_003906149.1;Parent=gene-DKM08_RS21725;Dbxref=GenBank:WP_003906149.1;Name=WP_003906149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003906149.1;locus_tag=DKM08_RS21725;product=hypothetical protein;protein_id=WP_003906149.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 496811 497077 . + . ID=gene-DKM08_RS16765;Name=DKM08_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16765;old_locus_tag=DKM08_16745 NZ_QFYX01000002.1 Protein Homology CDS 496811 497077 . + 0 ID=cds-WP_003419367.1;Parent=gene-DKM08_RS16765;Dbxref=GenBank:WP_003419367.1;Name=WP_003419367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177990.1;locus_tag=DKM08_RS16765;product=hypothetical protein;protein_id=WP_003419367.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 497062 497913 . + . ID=gene-DKM08_RS16770;Name=nat;gbkey=Gene;gene=nat;gene_biotype=protein_coding;locus_tag=DKM08_RS16770;old_locus_tag=DKM08_16750 NZ_QFYX01000002.1 Protein Homology CDS 497062 497913 . + 0 ID=cds-WP_003419364.1;Parent=gene-DKM08_RS16770;Dbxref=GenBank:WP_003419364.1;Name=WP_003419364.1;gbkey=CDS;gene=nat;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177989.1;locus_tag=DKM08_RS16770;product=arylamine N-acetyltransferase;protein_id=WP_003419364.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 497878 499044 . - . ID=gene-DKM08_RS16775;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=DKM08_RS16775;old_locus_tag=DKM08_16755 NZ_QFYX01000002.1 Protein Homology CDS 497878 499044 . - 0 ID=cds-WP_003419356.1;Parent=gene-DKM08_RS16775;Dbxref=GenBank:WP_003419356.1;Name=WP_003419356.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;gene=aspB;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218082.1;locus_tag=DKM08_RS16775;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003419356.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 499041 499997 . - . ID=gene-DKM08_RS16780;Name=ipdE2;gbkey=Gene;gene=ipdE2;gene_biotype=protein_coding;gene_synonym=fadE33;locus_tag=DKM08_RS16780;old_locus_tag=DKM08_16760 NZ_QFYX01000002.1 Protein Homology CDS 499041 499997 . - 0 ID=cds-WP_003419352.1;Parent=gene-DKM08_RS16780;Dbxref=GenBank:WP_003419352.1;Name=WP_003419352.1;Ontology_term=GO:0006707,GO:0003995,GO:0050660;gbkey=CDS;gene=ipdE2;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cholesterol catabolic process|0006707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218081.1;locus_tag=DKM08_RS16780;product=acyl-CoA dehydrogenase IpdE2;protein_id=WP_003419352.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 499994 500953 . - . ID=gene-DKM08_RS16785;Name=DKM08_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16785;old_locus_tag=DKM08_16765 NZ_QFYX01000002.1 Protein Homology CDS 499994 500953 . - 0 ID=cds-WP_010950910.1;Parent=gene-DKM08_RS16785;Dbxref=GenBank:WP_010950910.1;Name=WP_010950910.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218080.1;locus_tag=DKM08_RS16785;product=acyl-CoA dehydrogenase family protein;protein_id=WP_010950910.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 500950 502083 . - . ID=gene-DKM08_RS16790;Name=DKM08_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16790;old_locus_tag=DKM08_16770 NZ_QFYX01000002.1 Protein Homology CDS 500950 502083 . - 0 ID=cds-WP_003419346.1;Parent=gene-DKM08_RS16790;Dbxref=GenBank:WP_003419346.1;Name=WP_003419346.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218079.1;locus_tag=DKM08_RS16790;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419346.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 502084 503607 . - . ID=gene-DKM08_RS16795;Name=fadD3;gbkey=Gene;gene=fadD3;gene_biotype=protein_coding;locus_tag=DKM08_RS16795;old_locus_tag=DKM08_16775 NZ_QFYX01000002.1 Protein Homology CDS 502084 503607 . - 0 ID=cds-WP_003419343.1;Parent=gene-DKM08_RS16795;Dbxref=GenBank:WP_003419343.1;Name=WP_003419343.1;gbkey=CDS;gene=fadD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218078.1;locus_tag=DKM08_RS16795;product=3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl)propanoate--CoA ligase FadD3;protein_id=WP_003419343.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 503655 504812 . + . ID=gene-DKM08_RS16800;Name=ipdE1;gbkey=Gene;gene=ipdE1;gene_biotype=protein_coding;gene_synonym=fadE30;locus_tag=DKM08_RS16800;old_locus_tag=DKM08_16780 NZ_QFYX01000002.1 Protein Homology CDS 503655 504812 . + 0 ID=cds-WP_003419340.1;Parent=gene-DKM08_RS16800;Dbxref=GenBank:WP_003419340.1;Name=WP_003419340.1;gbkey=CDS;gene=ipdE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218077.1;locus_tag=DKM08_RS16800;product=acyl-CoA dehydrogenase IpdE1;protein_id=WP_003419340.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 504809 505597 . + . ID=gene-DKM08_RS16805;Name=ipdF;gbkey=Gene;gene=ipdF;gene_biotype=protein_coding;locus_tag=DKM08_RS16805;old_locus_tag=DKM08_16785 NZ_QFYX01000002.1 Protein Homology CDS 504809 505597 . + 0 ID=cds-WP_003419337.1;Parent=gene-DKM08_RS16805;Dbxref=GenBank:WP_003419337.1;Name=WP_003419337.1;gbkey=CDS;gene=ipdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218076.1;locus_tag=DKM08_RS16805;product=(5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA reductase;protein_id=WP_003419337.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 505606 507264 . - . ID=gene-DKM08_RS16810;Name=DKM08_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16810;old_locus_tag=DKM08_16790 NZ_QFYX01000002.1 Protein Homology CDS 505606 507264 . - 0 ID=cds-WP_003419334.1;Parent=gene-DKM08_RS16810;Dbxref=GenBank:WP_003419334.1;Name=WP_003419334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177988.1;locus_tag=DKM08_RS16810;product=PPE family protein;protein_id=WP_003419334.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 507613 508215 . + . ID=gene-DKM08_RS16815;Name=kstR2;gbkey=Gene;gene=kstR2;gene_biotype=protein_coding;locus_tag=DKM08_RS16815;old_locus_tag=DKM08_16795 NZ_QFYX01000002.1 Protein Homology CDS 507613 508215 . + 0 ID=cds-WP_003419329.1;Parent=gene-DKM08_RS16815;Dbxref=GenBank:WP_003419329.1;Name=WP_003419329.1;gbkey=CDS;gene=kstR2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218074.1;locus_tag=DKM08_RS16815;product=TetR family transcriptional regulator KstR2;protein_id=WP_003419329.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 508280 509440 . + . ID=gene-DKM08_RS16820;Name=fadA6;gbkey=Gene;gene=fadA6;gene_biotype=protein_coding;locus_tag=DKM08_RS16820;old_locus_tag=DKM08_16800 NZ_QFYX01000002.1 Protein Homology CDS 508280 509440 . + 0 ID=cds-WP_003419328.1;Parent=gene-DKM08_RS16820;Dbxref=GenBank:WP_003419328.1;Name=WP_003419328.1;gbkey=CDS;gene=fadA6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218073.1;locus_tag=DKM08_RS16820;product=steroid 3-ketoacyl-CoA thiolase FadA6;protein_id=WP_003419328.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 509545 510414 . + . ID=gene-DKM08_RS16825;Name=DKM08_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16825;old_locus_tag=DKM08_16805 NZ_QFYX01000002.1 Protein Homology CDS 509545 510414 . + 0 ID=cds-WP_003419327.1;Parent=gene-DKM08_RS16825;Dbxref=GenBank:WP_003419327.1;Name=WP_003419327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218072.1;locus_tag=DKM08_RS16825;product=DUF559 domain-containing protein;protein_id=WP_003419327.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 510502 512559 . - . ID=gene-DKM08_RS16830;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=DKM08_RS16830;old_locus_tag=DKM08_16810 NZ_QFYX01000002.1 Protein Homology CDS 510502 512559 . - 0 ID=cds-WP_003419325.1;Parent=gene-DKM08_RS16830;Dbxref=GenBank:WP_003419325.1;Name=WP_003419325.1;Ontology_term=GO:0006629;gbkey=CDS;gene=fdxB;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218071.1;locus_tag=DKM08_RS16830;product=fatty acid desaturase;protein_id=WP_003419325.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 512556 513623 . - . ID=gene-DKM08_RS16835;Name=ipdC;gbkey=Gene;gene=ipdC;gene_biotype=protein_coding;locus_tag=DKM08_RS16835;old_locus_tag=DKM08_16815 NZ_QFYX01000002.1 Protein Homology CDS 512556 513623 . - 0 ID=cds-WP_003419324.1;Parent=gene-DKM08_RS16835;Dbxref=GenBank:WP_003419324.1;Name=WP_003419324.1;gbkey=CDS;gene=ipdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218070.1;locus_tag=DKM08_RS16835;product=(3aS%2C4S%2C5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase;protein_id=WP_003419324.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 513721 514473 . - . ID=gene-DKM08_RS16840;Name=ipdB;gbkey=Gene;gene=ipdB;gene_biotype=protein_coding;locus_tag=DKM08_RS16840;old_locus_tag=DKM08_16820 NZ_QFYX01000002.1 Protein Homology CDS 513721 514473 . - 0 ID=cds-WP_003419321.1;Parent=gene-DKM08_RS16840;Dbxref=GenBank:WP_003419321.1;Name=WP_003419321.1;gbkey=CDS;gene=ipdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218069.1;locus_tag=DKM08_RS16840;product=cholesterol ring-cleaving hydrolase subunit IpdB;protein_id=WP_003419321.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 514470 515348 . - . ID=gene-DKM08_RS16845;Name=ipdA;gbkey=Gene;gene=ipdA;gene_biotype=protein_coding;locus_tag=DKM08_RS16845;old_locus_tag=DKM08_16825 NZ_QFYX01000002.1 Protein Homology CDS 514470 515348 . - 0 ID=cds-WP_003419318.1;Parent=gene-DKM08_RS16845;Dbxref=GenBank:WP_003419318.1;Name=WP_003419318.1;gbkey=CDS;gene=ipdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218068.1;locus_tag=DKM08_RS16845;product=cholesterol ring-cleaving hydrolase subunit IpdA;protein_id=WP_003419318.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 515348 516091 . - . ID=gene-DKM08_RS16850;Name=echA20;gbkey=Gene;gene=echA20;gene_biotype=protein_coding;locus_tag=DKM08_RS16850;old_locus_tag=DKM08_16830 NZ_QFYX01000002.1 Protein Homology CDS 515348 516091 . - 0 ID=cds-WP_003419315.1;Parent=gene-DKM08_RS16850;Dbxref=GenBank:WP_003419315.1;Name=WP_003419315.1;gbkey=CDS;gene=echA20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218067.1;locus_tag=DKM08_RS16850;product=(7aS)-7a-methyl-1%2C5-dioxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA hydrolase;protein_id=WP_003419315.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 516146 516925 . + . ID=gene-DKM08_RS16860;Name=DKM08_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16860;old_locus_tag=DKM08_16840 NZ_QFYX01000002.1 Protein Homology CDS 516146 516925 . + 0 ID=cds-WP_003419313.1;Parent=gene-DKM08_RS16860;Dbxref=GenBank:WP_003419313.1;Name=WP_003419313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218066.1;locus_tag=DKM08_RS16860;product=SDR family oxidoreductase;protein_id=WP_003419313.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 516948 517862 . + . ID=gene-DKM08_RS16865;Name=DKM08_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16865;old_locus_tag=DKM08_16845 NZ_QFYX01000002.1 Protein Homology CDS 516948 517862 . + 0 ID=cds-WP_010950909.1;Parent=gene-DKM08_RS16865;Dbxref=GenBank:WP_010950909.1;Name=WP_010950909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218065.1;locus_tag=DKM08_RS16865;product=SDR family oxidoreductase;protein_id=WP_010950909.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 517945 518400 . - . ID=gene-DKM08_RS16870;Name=ddn;gbkey=Gene;gene=ddn;gene_biotype=protein_coding;locus_tag=DKM08_RS16870;old_locus_tag=DKM08_16850 NZ_QFYX01000002.1 Protein Homology CDS 517945 518400 . - 0 ID=cds-WP_003419309.1;Parent=gene-DKM08_RS16870;Dbxref=GenBank:WP_003419309.1;Name=WP_003419309.1;gbkey=CDS;gene=ddn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218064.1;locus_tag=DKM08_RS16870;product=deazaflavin-dependent nitroreductase Ddn;protein_id=WP_003419309.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 518512 519687 . - . ID=gene-DKM08_RS16875;Name=DKM08_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16875;old_locus_tag=DKM08_16855 NZ_QFYX01000002.1 Protein Homology CDS 518512 519687 . - 0 ID=cds-WP_003419307.1;Parent=gene-DKM08_RS16875;Dbxref=GenBank:WP_003419307.1;Name=WP_003419307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218063.1;locus_tag=DKM08_RS16875;product=steroid 3-ketoacyl-CoA thiolase;protein_id=WP_003419307.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 519847 521100 . + . ID=gene-DKM08_RS16880;Name=cyp125;gbkey=Gene;gene=cyp125;gene_biotype=protein_coding;locus_tag=DKM08_RS16880;old_locus_tag=DKM08_16860 NZ_QFYX01000002.1 Protein Homology CDS 519847 521100 . + 0 ID=cds-WP_003912260.1;Parent=gene-DKM08_RS16880;Dbxref=GenBank:WP_003912260.1;Name=WP_003912260.1;gbkey=CDS;gene=cyp125;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938697.1;locus_tag=DKM08_RS16880;product=steroid C26-monooxygenase Cyp125;protein_id=WP_003912260.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 521100 522119 . + . ID=gene-DKM08_RS16885;Name=fadE28;gbkey=Gene;gene=fadE28;gene_biotype=protein_coding;locus_tag=DKM08_RS16885;old_locus_tag=DKM08_16865 NZ_QFYX01000002.1 Protein Homology CDS 521100 522119 . + 0 ID=cds-WP_003419299.1;Parent=gene-DKM08_RS16885;Dbxref=GenBank:WP_003419299.1;Name=WP_003419299.1;gbkey=CDS;gene=fadE28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218061.1;locus_tag=DKM08_RS16885;product=acyl-CoA dehydrogenase FadE28;protein_id=WP_003419299.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 522104 523267 . + . ID=gene-DKM08_RS16890;Name=fadE29;gbkey=Gene;gene=fadE29;gene_biotype=protein_coding;locus_tag=DKM08_RS16890;old_locus_tag=DKM08_16870 NZ_QFYX01000002.1 Protein Homology CDS 522104 523267 . + 0 ID=cds-WP_003419296.1;Parent=gene-DKM08_RS16890;Dbxref=GenBank:WP_003419296.1;Name=WP_003419296.1;gbkey=CDS;gene=fadE29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218060.1;locus_tag=DKM08_RS16890;product=acyl-CoA dehydrogenase FadE29;protein_id=WP_003419296.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 523264 524199 . + . ID=gene-DKM08_RS16895;Name=chsH2;gbkey=Gene;gene=chsH2;gene_biotype=protein_coding;locus_tag=DKM08_RS16895;old_locus_tag=DKM08_16875 NZ_QFYX01000002.1 Protein Homology CDS 523264 524199 . + 0 ID=cds-WP_003419293.1;Parent=gene-DKM08_RS16895;Dbxref=GenBank:WP_003419293.1;Name=WP_003419293.1;gbkey=CDS;gene=chsH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218059.1;locus_tag=DKM08_RS16895;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2;protein_id=WP_003419293.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 524196 524585 . + . ID=gene-DKM08_RS16900;Name=chsH1;gbkey=Gene;gene=chsH1;gene_biotype=protein_coding;locus_tag=DKM08_RS16900;old_locus_tag=DKM08_16880 NZ_QFYX01000002.1 Protein Homology CDS 524196 524585 . + 0 ID=cds-WP_003419290.1;Parent=gene-DKM08_RS16900;Dbxref=GenBank:WP_003419290.1;Name=WP_003419290.1;gbkey=CDS;gene=chsH1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218058.1;locus_tag=DKM08_RS16900;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit beta ChsH1;protein_id=WP_003419290.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 524585 525745 . + . ID=gene-DKM08_RS16905;Name=DKM08_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16905;old_locus_tag=DKM08_16885 NZ_QFYX01000002.1 Protein Homology CDS 524585 525745 . + 0 ID=cds-WP_003419287.1;Parent=gene-DKM08_RS16905;Dbxref=GenBank:WP_003419287.1;Name=WP_003419287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218057.1;locus_tag=DKM08_RS16905;product=lipid-transfer protein;protein_id=WP_003419287.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 525746 527185 . - . ID=gene-DKM08_RS16910;Name=DKM08_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16910;old_locus_tag=DKM08_16890 NZ_QFYX01000002.1 Protein Homology CDS 525746 527185 . - 0 ID=cds-WP_003900090.1;Parent=gene-DKM08_RS16910;Dbxref=GenBank:WP_003900090.1;Name=WP_003900090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177987.1;locus_tag=DKM08_RS16910;product=PPE family protein;protein_id=WP_003900090.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 527322 528182 . - . ID=gene-DKM08_RS16915;Name=DKM08_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16915;old_locus_tag=DKM08_16895 NZ_QFYX01000002.1 Protein Homology CDS 527322 528182 . - 0 ID=cds-WP_003419285.1;Parent=gene-DKM08_RS16915;Dbxref=GenBank:WP_003419285.1;Name=WP_003419285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177986.1;locus_tag=DKM08_RS16915;product=dehydrogenase;protein_id=WP_003419285.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 528184 529875 . - . ID=gene-DKM08_RS16920;Name=kstD;gbkey=Gene;gene=kstD;gene_biotype=protein_coding;locus_tag=DKM08_RS16920;old_locus_tag=DKM08_16900 NZ_QFYX01000002.1 Protein Homology CDS 528184 529875 . - 0 ID=cds-WP_003419253.1;Parent=gene-DKM08_RS16920;Dbxref=GenBank:WP_003419253.1;Name=WP_003419253.1;Ontology_term=GO:0006694,GO:0016042,GO:0047571;gbkey=CDS;gene=kstD;go_function=3-oxosteroid 1-dehydrogenase activity|0047571||IEA;go_process=steroid biosynthetic process|0006694||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218054.1;locus_tag=DKM08_RS16920;product=3-oxosteroid 1-dehydrogenase;protein_id=WP_003419253.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 529948 530733 . + . ID=gene-DKM08_RS16925;Name=hsaE;gbkey=Gene;gene=hsaE;gene_biotype=protein_coding;locus_tag=DKM08_RS16925;old_locus_tag=DKM08_16905 NZ_QFYX01000002.1 Protein Homology CDS 529948 530733 . + 0 ID=cds-WP_003419252.1;Parent=gene-DKM08_RS16925;Dbxref=GenBank:WP_003419252.1;Name=WP_003419252.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;gene=hsaE;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218053.1;locus_tag=DKM08_RS16925;product=2-keto-4-pentenoate hydratase;protein_id=WP_003419252.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 530744 531655 . + . ID=gene-DKM08_RS16930;Name=hsaG;gbkey=Gene;gene=hsaG;gene_biotype=protein_coding;locus_tag=DKM08_RS16930;old_locus_tag=DKM08_16910 NZ_QFYX01000002.1 Protein Homology CDS 530744 531655 . + 0 ID=cds-WP_003419251.1;Parent=gene-DKM08_RS16930;Dbxref=GenBank:WP_003419251.1;Name=WP_003419251.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;gene=hsaG;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218052.1;locus_tag=DKM08_RS16930;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_003419251.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 531652 532692 . + . ID=gene-DKM08_RS16935;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=DKM08_RS16935;old_locus_tag=DKM08_16915 NZ_QFYX01000002.1 Protein Homology CDS 531652 532692 . + 0 ID=cds-WP_003419250.1;Parent=gene-DKM08_RS16935;Dbxref=GenBank:WP_003419250.1;Name=WP_003419250.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218051.1;locus_tag=DKM08_RS16935;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003419250.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 532791 534539 . + . ID=gene-DKM08_RS16940;Name=DKM08_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16940;old_locus_tag=DKM08_16920 NZ_QFYX01000002.1 Protein Homology CDS 532791 534539 . + 0 ID=cds-WP_003900088.1;Parent=gene-DKM08_RS16940;Dbxref=GenBank:WP_003900088.1;Name=WP_003900088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177985.1;locus_tag=DKM08_RS16940;product=PPE family protein;protein_id=WP_003900088.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 534681 535901 . - . ID=gene-DKM08_RS16945;Name=DKM08_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16945;old_locus_tag=DKM08_16925 NZ_QFYX01000002.1 Protein Homology CDS 534681 535901 . - 0 ID=cds-WP_003419226.1;Parent=gene-DKM08_RS16945;Dbxref=GenBank:WP_003419226.1;Name=WP_003419226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177984.1;locus_tag=DKM08_RS16945;product=PPE family protein;protein_id=WP_003419226.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 536300 537427 . + . ID=gene-DKM08_RS16950;Name=DKM08_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16950;old_locus_tag=DKM08_16930 NZ_QFYX01000002.1 Protein Homology CDS 536300 537427 . + 0 ID=cds-WP_003900087.1;Parent=gene-DKM08_RS16950;Dbxref=GenBank:WP_003900087.1;Name=WP_003900087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218048.1;locus_tag=DKM08_RS16950;product=hypothetical protein;protein_id=WP_003900087.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 537424 538206 . + . ID=gene-DKM08_RS16955;Name=DKM08_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16955;old_locus_tag=DKM08_16935 NZ_QFYX01000002.1 Protein Homology CDS 537424 538206 . + 0 ID=cds-WP_003419223.1;Parent=gene-DKM08_RS16955;Dbxref=GenBank:WP_003419223.1;Name=WP_003419223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218047.1;locus_tag=DKM08_RS16955;product=SDR family oxidoreductase;protein_id=WP_003419223.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 538206 539360 . + . ID=gene-DKM08_RS16960;Name=DKM08_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16960;old_locus_tag=DKM08_16940 NZ_QFYX01000002.1 Protein Homology CDS 538206 539360 . + 0 ID=cds-WP_003419222.1;Parent=gene-DKM08_RS16960;Dbxref=GenBank:WP_003419222.1;Name=WP_003419222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218046.1;locus_tag=DKM08_RS16960;product=TLR2-mediated response inhibitor;protein_id=WP_003419222.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 539624 539821 . - . ID=gene-DKM08_RS16970;Name=DKM08_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16970;old_locus_tag=DKM08_16950 NZ_QFYX01000002.1 Protein Homology CDS 539624 539821 . - 0 ID=cds-WP_003908266.1;Parent=gene-DKM08_RS16970;Dbxref=GenBank:WP_003908266.1;Name=WP_003908266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908266.1;locus_tag=DKM08_RS16970;product=hypothetical protein;protein_id=WP_003908266.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 540052 540765 . + . ID=gene-DKM08_RS16975;Name=DKM08_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16975;old_locus_tag=DKM08_16955 NZ_QFYX01000002.1 Protein Homology CDS 540052 540765 . + 0 ID=cds-WP_003900086.1;Parent=gene-DKM08_RS16975;Dbxref=GenBank:WP_003900086.1;Name=WP_003900086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218045.1;locus_tag=DKM08_RS16975;product=hypothetical protein;protein_id=WP_003900086.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 541190 541639 . - . ID=gene-DKM08_RS16980;Name=DKM08_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16980;old_locus_tag=DKM08_16960 NZ_QFYX01000002.1 Protein Homology CDS 541190 541639 . - 0 ID=cds-WP_003419215.1;Parent=gene-DKM08_RS16980;Dbxref=GenBank:WP_003419215.1;Name=WP_003419215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218044.1;locus_tag=DKM08_RS16980;product=hypothetical protein;protein_id=WP_003419215.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 541645 542805 . - . ID=gene-DKM08_RS16985;Name=kshA;gbkey=Gene;gene=kshA;gene_biotype=protein_coding;locus_tag=DKM08_RS16985;old_locus_tag=DKM08_16965 NZ_QFYX01000002.1 Protein Homology CDS 541645 542805 . - 0 ID=cds-WP_003419211.1;Parent=gene-DKM08_RS16985;Dbxref=GenBank:WP_003419211.1;Name=WP_003419211.1;gbkey=CDS;gene=kshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218043.1;locus_tag=DKM08_RS16985;product=3-ketosteroid-9-alpha-hydroxylase subunit KshA;protein_id=WP_003419211.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 542920 543444 . + . ID=gene-DKM08_RS16990;Name=DKM08_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16990;old_locus_tag=DKM08_16970 NZ_QFYX01000002.1 Protein Homology CDS 542920 543444 . + 0 ID=cds-WP_003419208.1;Parent=gene-DKM08_RS16990;Dbxref=GenBank:WP_003419208.1;Name=WP_003419208.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218042.1;locus_tag=DKM08_RS16990;product=gamma carbonic anhydrase family protein;protein_id=WP_003419208.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 543458 544489 . - . ID=gene-DKM08_RS16995;Name=DKM08_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS16995;old_locus_tag=DKM08_16975 NZ_QFYX01000002.1 Protein Homology CDS 543458 544489 . - 0 ID=cds-WP_003419207.1;Parent=gene-DKM08_RS16995;Dbxref=GenBank:WP_003419207.1;Name=WP_003419207.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218041.1;locus_tag=DKM08_RS16995;product=NHL repeat-containing protein;protein_id=WP_003419207.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 544531 545715 . - . ID=gene-DKM08_RS17000;Name=DKM08_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17000;old_locus_tag=DKM08_16980 NZ_QFYX01000002.1 Protein Homology CDS 544531 545715 . - 0 ID=cds-WP_003901662.1;Parent=gene-DKM08_RS17000;Dbxref=GenBank:WP_003901662.1;Name=WP_003901662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218040.1;locus_tag=DKM08_RS17000;product=thiolase domain-containing protein;protein_id=WP_003901662.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 545732 546796 . - . ID=gene-DKM08_RS17005;Name=DKM08_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17005;old_locus_tag=DKM08_16985 NZ_QFYX01000002.1 Protein Homology CDS 545732 546796 . - 0 ID=cds-WP_003419199.1;Parent=gene-DKM08_RS17005;Dbxref=GenBank:WP_003419199.1;Name=WP_003419199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218039.1;locus_tag=DKM08_RS17005;product=thiolase domain-containing protein;protein_id=WP_003419199.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 546812 547816 . - . ID=gene-DKM08_RS17010;Name=DKM08_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17010;old_locus_tag=DKM08_16990 NZ_QFYX01000002.1 Protein Homology CDS 546812 547816 . - 0 ID=cds-WP_003900085.1;Parent=gene-DKM08_RS17010;Dbxref=GenBank:WP_003900085.1;Name=WP_003900085.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487624.1;locus_tag=DKM08_RS17010;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003900085.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 547888 548919 . + . ID=gene-DKM08_RS17015;Name=DKM08_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17015;old_locus_tag=DKM08_16995 NZ_QFYX01000002.1 Protein Homology CDS 547888 548919 . + 0 ID=cds-WP_003419192.1;Parent=gene-DKM08_RS17015;Dbxref=GenBank:WP_003419192.1;Name=WP_003419192.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015628990.1;locus_tag=DKM08_RS17015;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003419192.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 548984 549694 . - . ID=gene-DKM08_RS17020;Name=DKM08_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17020;old_locus_tag=DKM08_17000 NZ_QFYX01000002.1 Protein Homology CDS 548984 549694 . - 0 ID=cds-WP_003419190.1;Parent=gene-DKM08_RS17020;Dbxref=GenBank:WP_003419190.1;Name=WP_003419190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218036.1;locus_tag=DKM08_RS17020;product=acetoacetate decarboxylase family protein;protein_id=WP_003419190.1;transl_table=11 NZ_QFYX01000002.1 RefSeq pseudogene 549723 550918 . + . ID=gene-DKM08_RS21730;Name=cyp142;gbkey=Gene;gene=cyp142;gene_biotype=pseudogene;locus_tag=DKM08_RS21730;pseudo=true NZ_QFYX01000002.1 Protein Homology CDS 549723 550918 . + 0 ID=cds-DKM08_RS21730;Parent=gene-DKM08_RS21730;Note=frameshifted;gbkey=CDS;gene=cyp142;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218035.1;locus_tag=DKM08_RS21730;product=steroid C26-monooxygenase Cyp142;pseudo=true;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 550973 551812 . - . ID=gene-DKM08_RS17035;Name=DKM08_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17035;old_locus_tag=DKM08_17015 NZ_QFYX01000002.1 Protein Homology CDS 550973 551812 . - 0 ID=cds-WP_003419184.1;Parent=gene-DKM08_RS17035;Dbxref=GenBank:WP_003419184.1;Name=WP_003419184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218034.1;locus_tag=DKM08_RS17035;product=hypothetical protein;protein_id=WP_003419184.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 551908 552699 . - . ID=gene-DKM08_RS17040;Name=DKM08_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17040;old_locus_tag=DKM08_17020 NZ_QFYX01000002.1 Protein Homology CDS 551908 552699 . - 0 ID=cds-WP_003419179.1;Parent=gene-DKM08_RS17040;Dbxref=GenBank:WP_003419179.1;Name=WP_003419179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218033.1;locus_tag=DKM08_RS17040;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003419179.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 552773 554419 . + . ID=gene-DKM08_RS17045;Name=DKM08_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17045;old_locus_tag=DKM08_17025 NZ_QFYX01000002.1 Protein Homology CDS 552773 554419 . + 0 ID=cds-WP_003901660.1;Parent=gene-DKM08_RS17045;Dbxref=GenBank:WP_003901660.1;Name=WP_003901660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177983.1;locus_tag=DKM08_RS17045;product=acyl-CoA synthetase;protein_id=WP_003901660.1;transl_table=11 NZ_QFYX01000002.1 RefSeq gene 554980 556439 . - . ID=gene-DKM08_RS17055;Name=DKM08_RS17055;end_range=556439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17055;old_locus_tag=DKM08_17035;partial=true NZ_QFYX01000002.1 Protein Homology CDS 554980 556439 . - 2 ID=cds-WP_147020924.1;Parent=gene-DKM08_RS17055;Dbxref=GenBank:WP_147020924.1;Name=WP_147020924.1;end_range=556439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177887.1;locus_tag=DKM08_RS17055;partial=true;product=PE family protein;protein_id=WP_147020924.1;transl_table=11 ##sequence-region NZ_QFYX01000030.1 1 445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000030.1 RefSeq region 1 445 . + . ID=NZ_QFYX01000030.1:1..445;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000030.1 RefSeq gene 14 445 . + . ID=gene-DKM08_RS21390;Name=DKM08_RS21390;end_range=445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21390;old_locus_tag=DKM08_21380;partial=true NZ_QFYX01000030.1 Protein Homology CDS 14 445 . + 0 ID=cds-WP_237085741.1;Parent=gene-DKM08_RS21390;Dbxref=GenBank:WP_237085741.1;Name=WP_237085741.1;Ontology_term=GO:0033014,GO:0004852;end_range=445,.;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: protein motif:HMM:NF014641.6;locus_tag=DKM08_RS21390;partial=true;product=uroporphyrinogen-III synthase;protein_id=WP_237085741.1;transl_table=11 ##sequence-region NZ_QFYX01000031.1 1 445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000031.1 RefSeq region 1 445 . + . ID=NZ_QFYX01000031.1:1..445;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000031.1 RefSeq gene 1 445 . - . ID=gene-DKM08_RS21395;Name=DKM08_RS21395;end_range=445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21395;old_locus_tag=DKM08_21385;partial=true;start_range=.,1 NZ_QFYX01000031.1 Protein Homology CDS 1 445 . - 1 ID=cds-WP_147020967.1;Parent=gene-DKM08_RS21395;Dbxref=GenBank:WP_147020967.1;Name=WP_147020967.1;Ontology_term=GO:0016020;end_range=445,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005099734.1;locus_tag=DKM08_RS21395;partial=true;product=MMPL family transporter;protein_id=WP_147020967.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000032.1 1 443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000032.1 RefSeq region 1 443 . + . ID=NZ_QFYX01000032.1:1..443;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000032.1 RefSeq gene 1 261 . - . ID=gene-DKM08_RS22845;Name=DKM08_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22845;old_locus_tag=DKM08_21390;partial=true;start_range=.,1 NZ_QFYX01000032.1 Protein Homology CDS 1 261 . - 0 ID=cds-WP_423797349.1;Parent=gene-DKM08_RS22845;Dbxref=GenBank:WP_423797349.1;Name=WP_423797349.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012576.6;locus_tag=DKM08_RS22845;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_423797349.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000033.1 1 441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000033.1 RefSeq region 1 441 . + . ID=NZ_QFYX01000033.1:1..441;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000033.1 RefSeq gene 1 441 . + . ID=gene-DKM08_RS21405;Name=DKM08_RS21405;end_range=441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21405;old_locus_tag=DKM08_21395;partial=true;start_range=.,1 NZ_QFYX01000033.1 Protein Homology CDS 1 441 . + 2 ID=cds-WP_186807151.1;Parent=gene-DKM08_RS21405;Dbxref=GenBank:WP_186807151.1;Name=WP_186807151.1;Ontology_term=GO:0009228,GO:0000287,GO:0004417,GO:0005524;end_range=441,.;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,hydroxyethylthiazole kinase activity|0004417||IEA,ATP binding|0005524||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:NF014198.6;locus_tag=DKM08_RS21405;partial=true;product=hydroxyethylthiazole kinase;protein_id=WP_186807151.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000034.1 1 434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000034.1 RefSeq region 1 434 . + . ID=NZ_QFYX01000034.1:1..434;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000034.1 RefSeq gene 1 111 . - . ID=gene-DKM08_RS21410;Name=DKM08_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21410;old_locus_tag=DKM08_21400;partial=true;start_range=.,1 NZ_QFYX01000034.1 Protein Homology CDS 1 111 . - 0 ID=cds-WP_031699683.1;Parent=gene-DKM08_RS21410;Dbxref=GenBank:WP_031699683.1;Name=WP_031699683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177979.1;locus_tag=DKM08_RS21410;partial=true;product=PE domain-containing protein;protein_id=WP_031699683.1;start_range=.,1;transl_table=11 NZ_QFYX01000034.1 RefSeq pseudogene 307 434 . + . ID=gene-DKM08_RS22365;Name=DKM08_RS22365;end_range=434,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22365;partial=true;pseudo=true;start_range=.,307 NZ_QFYX01000034.1 Protein Homology CDS 307 434 . + 0 ID=cds-DKM08_RS22365;Parent=gene-DKM08_RS22365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177983.1;locus_tag=DKM08_RS22365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,307;transl_table=11 ##sequence-region NZ_QFYX01000035.1 1 434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000035.1 RefSeq region 1 434 . + . ID=NZ_QFYX01000035.1:1..434;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000035.1 RefSeq gene 1 434 . - . ID=gene-DKM08_RS21870;Name=DKM08_RS21870;end_range=434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21870;partial=true;start_range=.,1 NZ_QFYX01000035.1 GeneMarkS-2+ CDS 1 434 . - 1 ID=cds-WP_215727388.1;Parent=gene-DKM08_RS21870;Dbxref=GenBank:WP_215727388.1;Name=WP_215727388.1;end_range=434,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21870;partial=true;product=hypothetical protein;protein_id=WP_215727388.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000036.1 1 430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000036.1 RefSeq region 1 430 . + . ID=NZ_QFYX01000036.1:1..430;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000036.1 RefSeq gene 1 374 . - . ID=gene-DKM08_RS21425;Name=DKM08_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21425;old_locus_tag=DKM08_21415;partial=true;start_range=.,1 NZ_QFYX01000036.1 Protein Homology CDS 1 374 . - 0 ID=cds-WP_272869416.1;Parent=gene-DKM08_RS21425;Dbxref=GenBank:WP_272869416.1;Name=WP_272869416.1;Ontology_term=GO:0031554,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of termination of DNA-templated transcription|0031554||IEA;inference=COORDINATES: protein motif:HMM:NF020118.6;locus_tag=DKM08_RS21425;partial=true;product=NusA N-terminal domain-containing protein;protein_id=WP_272869416.1;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000037.1 1 430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000037.1 RefSeq region 1 430 . + . ID=NZ_QFYX01000037.1:1..430;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000037.1 RefSeq gene 24 430 . + . ID=gene-DKM08_RS21430;Name=DKM08_RS21430;end_range=430,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21430;old_locus_tag=DKM08_21420;partial=true NZ_QFYX01000037.1 Protein Homology CDS 24 430 . + 0 ID=cds-WP_237085742.1;Parent=gene-DKM08_RS21430;Dbxref=GenBank:WP_237085742.1;Name=WP_237085742.1;end_range=430,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014724.6;locus_tag=DKM08_RS21430;partial=true;product=YdcF family protein;protein_id=WP_237085742.1;transl_table=11 ##sequence-region NZ_QFYX01000038.1 1 219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000038.1 RefSeq region 1 219 . + . ID=NZ_QFYX01000038.1:1..219;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000038.1 RefSeq pseudogene 1 177 . + . ID=gene-DKM08_RS22850;Name=DKM08_RS22850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22850;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000038.1 Protein Homology CDS 1 177 . + 0 ID=cds-DKM08_RS22850;Parent=gene-DKM08_RS22850;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293051.1;locus_tag=DKM08_RS22850;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000003.1 1 382286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000003.1 RefSeq region 1 382286 . + . ID=NZ_QFYX01000003.1:1..382286;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000003.1 RefSeq gene 287 721 . - . ID=gene-DKM08_RS17060;Name=DKM08_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17060;old_locus_tag=DKM08_17045 NZ_QFYX01000003.1 Protein Homology CDS 287 721 . - 0 ID=cds-WP_003899952.1;Parent=gene-DKM08_RS17060;Dbxref=GenBank:WP_003899952.1;Name=WP_003899952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217696.1;locus_tag=DKM08_RS17060;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899952.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 724 1176 . - . ID=gene-DKM08_RS17065;Name=DKM08_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17065;old_locus_tag=DKM08_17050 NZ_QFYX01000003.1 Protein Homology CDS 724 1176 . - 0 ID=cds-WP_003899953.1;Parent=gene-DKM08_RS17065;Dbxref=GenBank:WP_003899953.1;Name=WP_003899953.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217697.1;locus_tag=DKM08_RS17065;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899953.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 1407 1751 . + . ID=gene-DKM08_RS17070;Name=DKM08_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17070;old_locus_tag=DKM08_17055 NZ_QFYX01000003.1 Protein Homology CDS 1407 1751 . + 0 ID=cds-WP_003899954.1;Parent=gene-DKM08_RS17070;Dbxref=GenBank:WP_003899954.1;Name=WP_003899954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217698.1;locus_tag=DKM08_RS17070;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003899954.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 1748 2077 . + . ID=gene-DKM08_RS17075;Name=DKM08_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17075;old_locus_tag=DKM08_17060 NZ_QFYX01000003.1 Protein Homology CDS 1748 2077 . + 0 ID=cds-WP_003899955.1;Parent=gene-DKM08_RS17075;Dbxref=GenBank:WP_003899955.1;Name=WP_003899955.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217699.1;locus_tag=DKM08_RS17075;product=helix-turn-helix domain-containing protein;protein_id=WP_003899955.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 2615 2962 . + . ID=gene-DKM08_RS17080;Name=DKM08_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17080;old_locus_tag=DKM08_17065 NZ_QFYX01000003.1 Protein Homology CDS 2615 2962 . + 0 ID=cds-WP_003899956.1;Parent=gene-DKM08_RS17080;Dbxref=GenBank:WP_003899956.1;Name=WP_003899956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217704.1;locus_tag=DKM08_RS17080;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003899956.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 2959 3579 . + . ID=gene-DKM08_RS17085;Name=DKM08_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17085;old_locus_tag=DKM08_17070 NZ_QFYX01000003.1 Protein Homology CDS 2959 3579 . + 0 ID=cds-WP_003899957.1;Parent=gene-DKM08_RS17085;Dbxref=GenBank:WP_003899957.1;Name=WP_003899957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217705.1;locus_tag=DKM08_RS17085;product=RES family NAD+ phosphorylase;protein_id=WP_003899957.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 3739 5004 . - . ID=gene-DKM08_RS17090;Name=DKM08_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17090;old_locus_tag=DKM08_17075 NZ_QFYX01000003.1 Protein Homology CDS 3739 5004 . - 0 ID=cds-WP_003909837.1;Parent=gene-DKM08_RS17090;Dbxref=GenBank:WP_003909837.1;Name=WP_003909837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217706.1;locus_tag=DKM08_RS17090;product=hypothetical protein;protein_id=WP_003909837.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 5172 5381 . + . ID=gene-DKM08_RS17095;Name=DKM08_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17095;old_locus_tag=DKM08_17080 NZ_QFYX01000003.1 Protein Homology CDS 5172 5381 . + 0 ID=cds-WP_003416778.1;Parent=gene-DKM08_RS17095;Dbxref=GenBank:WP_003416778.1;Name=WP_003416778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411905.1;locus_tag=DKM08_RS17095;product=hypothetical protein;protein_id=WP_003416778.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 5416 5601 . + . ID=gene-DKM08_RS21860;Name=DKM08_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21860;old_locus_tag=DKM08_17085 NZ_QFYX01000003.1 Protein Homology CDS 5416 5601 . + 0 ID=cds-WP_003908177.1;Parent=gene-DKM08_RS21860;Dbxref=GenBank:WP_003908177.1;Name=WP_003908177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908177.1;locus_tag=DKM08_RS21860;product=hypothetical protein;protein_id=WP_003908177.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 5628 6884 . - . ID=gene-DKM08_RS17105;Name=DKM08_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17105;old_locus_tag=DKM08_17090 NZ_QFYX01000003.1 Protein Homology CDS 5628 6884 . - 0 ID=cds-WP_003899959.1;Parent=gene-DKM08_RS17105;Dbxref=GenBank:WP_003899959.1;Name=WP_003899959.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899959.1;locus_tag=DKM08_RS17105;product=IS30 family transposase;protein_id=WP_003899959.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 6946 7170 . - . ID=gene-DKM08_RS17110;Name=DKM08_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17110;old_locus_tag=DKM08_17095 NZ_QFYX01000003.1 Protein Homology CDS 6946 7170 . - 0 ID=cds-WP_003416790.1;Parent=gene-DKM08_RS17110;Dbxref=GenBank:WP_003416790.1;Name=WP_003416790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909838.1;locus_tag=DKM08_RS17110;product=hypothetical protein;protein_id=WP_003416790.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 7684 7760 . - . ID=gene-DKM08_RS17120;Name=DKM08_RS17120;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS17120;old_locus_tag=DKM08_17105 NZ_QFYX01000003.1 tRNAscan-SE tRNA 7684 7760 . - . ID=rna-DKM08_RS17120;Parent=gene-DKM08_RS17120;anticodon=(pos:complement(7724..7726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS17120;product=tRNA-Met NZ_QFYX01000003.1 tRNAscan-SE exon 7684 7760 . - . ID=exon-DKM08_RS17120-1;Parent=rna-DKM08_RS17120;anticodon=(pos:complement(7724..7726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS17120;product=tRNA-Met NZ_QFYX01000003.1 RefSeq gene 7877 8341 . + . ID=gene-DKM08_RS17125;Name=DKM08_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17125;old_locus_tag=DKM08_17110 NZ_QFYX01000003.1 Protein Homology CDS 7877 8341 . + 0 ID=cds-WP_003913440.1;Parent=gene-DKM08_RS17125;Dbxref=GenBank:WP_003913440.1;Name=WP_003913440.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=DKM08_RS17125;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003913440.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 8511 11489 . - . ID=gene-DKM08_RS17130;Name=DKM08_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17130;old_locus_tag=DKM08_17115 NZ_QFYX01000003.1 Protein Homology CDS 8511 11489 . - 0 ID=cds-WP_003416795.1;Parent=gene-DKM08_RS17130;Dbxref=GenBank:WP_003416795.1;Name=WP_003416795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217709.1;locus_tag=DKM08_RS17130;product=UPF0182 family protein;protein_id=WP_003416795.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 11581 12603 . - . ID=gene-DKM08_RS17135;Name=DKM08_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17135;old_locus_tag=DKM08_17120 NZ_QFYX01000003.1 Protein Homology CDS 11581 12603 . - 0 ID=cds-WP_003416799.1;Parent=gene-DKM08_RS17135;Dbxref=GenBank:WP_003416799.1;Name=WP_003416799.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0005524;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217710.1;locus_tag=DKM08_RS17135;product=YlbL family protein;protein_id=WP_003416799.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 12681 14099 . + . ID=gene-DKM08_RS17140;Name=DKM08_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17140;old_locus_tag=DKM08_17125 NZ_QFYX01000003.1 Protein Homology CDS 12681 14099 . + 0 ID=cds-WP_003416804.1;Parent=gene-DKM08_RS17140;Dbxref=GenBank:WP_003416804.1;Name=WP_003416804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217711.1;locus_tag=DKM08_RS17140;product=zinc-dependent metalloprotease;protein_id=WP_003416804.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 14138 15004 . + . ID=gene-DKM08_RS17145;Name=DKM08_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17145;old_locus_tag=DKM08_17130 NZ_QFYX01000003.1 Protein Homology CDS 14138 15004 . + 0 ID=cds-WP_021082912.1;Parent=gene-DKM08_RS17145;Dbxref=GenBank:WP_021082912.1;Name=WP_021082912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383154.1;locus_tag=DKM08_RS17145;product=hypothetical protein;protein_id=WP_021082912.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 15013 15186 . - . ID=gene-DKM08_RS17150;Name=DKM08_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17150;old_locus_tag=DKM08_17135 NZ_QFYX01000003.1 Protein Homology CDS 15013 15186 . - 0 ID=cds-WP_015456486.1;Parent=gene-DKM08_RS17150;Dbxref=GenBank:WP_015456486.1;Name=WP_015456486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393233.1;locus_tag=DKM08_RS17150;product=hypothetical protein;protein_id=WP_015456486.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 15351 16694 . + . ID=gene-DKM08_RS17155;Name=DKM08_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17155;old_locus_tag=DKM08_17140 NZ_QFYX01000003.1 Protein Homology CDS 15351 16694 . + 0 ID=cds-WP_003416815.1;Parent=gene-DKM08_RS17155;Dbxref=GenBank:WP_003416815.1;Name=WP_003416815.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217713.1;locus_tag=DKM08_RS17155;product=ABC1 kinase family protein;protein_id=WP_003416815.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 16728 17006 . - . ID=gene-DKM08_RS17160;Name=whiB7;gbkey=Gene;gene=whiB7;gene_biotype=protein_coding;locus_tag=DKM08_RS17160;old_locus_tag=DKM08_17145 NZ_QFYX01000003.1 Protein Homology CDS 16728 17006 . - 0 ID=cds-WP_003899963.1;Parent=gene-DKM08_RS17160;Dbxref=GenBank:WP_003899963.1;Name=WP_003899963.1;gbkey=CDS;gene=whiB7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177940.1;locus_tag=DKM08_RS17160;product=transcriptional regulator WhiB7;protein_id=WP_003899963.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 17436 19538 . - . ID=gene-DKM08_RS17165;Name=uvrD2;gbkey=Gene;gene=uvrD2;gene_biotype=protein_coding;locus_tag=DKM08_RS17165;old_locus_tag=DKM08_17150 NZ_QFYX01000003.1 Protein Homology CDS 17436 19538 . - 0 ID=cds-WP_003416822.1;Parent=gene-DKM08_RS17165;Dbxref=GenBank:WP_003416822.1;Name=WP_003416822.1;gbkey=CDS;gene=uvrD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217714.1;locus_tag=DKM08_RS17165;product=ATP-dependent DNA helicase UvrD2;protein_id=WP_003416822.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 19662 19916 . + . ID=gene-DKM08_RS17170;Name=mrx1;gbkey=Gene;gene=mrx1;gene_biotype=protein_coding;locus_tag=DKM08_RS17170;old_locus_tag=DKM08_17155 NZ_QFYX01000003.1 Protein Homology CDS 19662 19916 . + 0 ID=cds-WP_003416827.1;Parent=gene-DKM08_RS17170;Dbxref=GenBank:WP_003416827.1;Name=WP_003416827.1;gbkey=CDS;gene=mrx1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177941.1;locus_tag=DKM08_RS17170;product=mycoredoxin Mrx1;protein_id=WP_003416827.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 19929 20870 . - . ID=gene-DKM08_RS17175;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=DKM08_RS17175;old_locus_tag=DKM08_17160 NZ_QFYX01000003.1 Protein Homology CDS 19929 20870 . - 0 ID=cds-WP_003416829.1;Parent=gene-DKM08_RS17175;Dbxref=GenBank:WP_003416829.1;Name=WP_003416829.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217715.1;locus_tag=DKM08_RS17175;product=NAD(+) diphosphatase;protein_id=WP_003416829.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 20929 21996 . - . ID=gene-DKM08_RS17180;Name=DKM08_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17180;old_locus_tag=DKM08_17165 NZ_QFYX01000003.1 Protein Homology CDS 20929 21996 . - 0 ID=cds-WP_003416831.1;Parent=gene-DKM08_RS17180;Dbxref=GenBank:WP_003416831.1;Name=WP_003416831.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217716.1;locus_tag=DKM08_RS17180;product=potassium channel family protein;protein_id=WP_003416831.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 22058 25363 . - . ID=gene-DKM08_RS17185;Name=adnB;gbkey=Gene;gene=adnB;gene_biotype=protein_coding;locus_tag=DKM08_RS17185;old_locus_tag=DKM08_17170 NZ_QFYX01000003.1 Protein Homology CDS 22058 25363 . - 0 ID=cds-WP_003416833.1;Parent=gene-DKM08_RS17185;Dbxref=GenBank:WP_003416833.1;Name=WP_003416833.1;gbkey=CDS;gene=adnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217717.1;locus_tag=DKM08_RS17185;product=ATP-dependent DNA helicase AdnB;protein_id=WP_003416833.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 25360 28527 . - . ID=gene-DKM08_RS17190;Name=adnA;gbkey=Gene;gene=adnA;gene_biotype=protein_coding;locus_tag=DKM08_RS17190;old_locus_tag=DKM08_17175 NZ_QFYX01000003.1 Protein Homology CDS 25360 28527 . - 0 ID=cds-WP_003905015.1;Parent=gene-DKM08_RS17190;Dbxref=GenBank:WP_003905015.1;Name=WP_003905015.1;gbkey=CDS;gene=adnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217718.1;locus_tag=DKM08_RS17190;product=ATP-dependent DNA helicase AdnA;protein_id=WP_003905015.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 28613 28822 . + . ID=gene-DKM08_RS17195;Name=DKM08_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17195;old_locus_tag=DKM08_17180 NZ_QFYX01000003.1 Protein Homology CDS 28613 28822 . + 0 ID=cds-WP_003907005.1;Parent=gene-DKM08_RS17195;Dbxref=GenBank:WP_003907005.1;Name=WP_003907005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030044.1;locus_tag=DKM08_RS17195;product=hypothetical protein;protein_id=WP_003907005.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 28853 29638 . + . ID=gene-DKM08_RS17200;Name=lipV;gbkey=Gene;gene=lipV;gene_biotype=protein_coding;locus_tag=DKM08_RS17200;old_locus_tag=DKM08_17185 NZ_QFYX01000003.1 Protein Homology CDS 28853 29638 . + 0 ID=cds-WP_003899968.1;Parent=gene-DKM08_RS17200;Dbxref=GenBank:WP_003899968.1;Name=WP_003899968.1;gbkey=CDS;gene=lipV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899968.1;locus_tag=DKM08_RS17200;product=lipase LipV;protein_id=WP_003899968.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 29641 29946 . + . ID=gene-DKM08_RS17205;Name=DKM08_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17205;old_locus_tag=DKM08_17190 NZ_QFYX01000003.1 Protein Homology CDS 29641 29946 . + 0 ID=cds-WP_003416847.1;Parent=gene-DKM08_RS17205;Dbxref=GenBank:WP_003416847.1;Name=WP_003416847.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217720.1;locus_tag=DKM08_RS17205;product=MGMT family protein;protein_id=WP_003416847.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 29953 30807 . - . ID=gene-DKM08_RS17210;Name=DKM08_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17210;old_locus_tag=DKM08_17195 NZ_QFYX01000003.1 Protein Homology CDS 29953 30807 . - 0 ID=cds-WP_003416850.1;Parent=gene-DKM08_RS17210;Dbxref=GenBank:WP_003416850.1;Name=WP_003416850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712234.1;locus_tag=DKM08_RS17210;product=TIGR02569 family protein;protein_id=WP_003416850.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 30858 32036 . - . ID=gene-DKM08_RS17215;Name=moeZ;gbkey=Gene;gene=moeZ;gene_biotype=protein_coding;locus_tag=DKM08_RS17215;old_locus_tag=DKM08_17200 NZ_QFYX01000003.1 Protein Homology CDS 30858 32036 . - 0 ID=cds-WP_003416855.1;Parent=gene-DKM08_RS17215;Dbxref=GenBank:WP_003416855.1;Name=WP_003416855.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeZ;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177942.1;locus_tag=DKM08_RS17215;product=adenylyltransferase/sulfurtransferase MoeZ;protein_id=WP_003416855.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 32127 33155 . - . ID=gene-DKM08_RS17220;Name=DKM08_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17220;old_locus_tag=DKM08_17205 NZ_QFYX01000003.1 Protein Homology CDS 32127 33155 . - 0 ID=cds-WP_043856433.1;Parent=gene-DKM08_RS17220;Dbxref=GenBank:WP_043856433.1;Name=WP_043856433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899970.1;locus_tag=DKM08_RS17220;product=DUF3152 domain-containing protein;protein_id=WP_043856433.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 33330 34016 . + . ID=gene-DKM08_RS17225;Name=DKM08_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17225;old_locus_tag=DKM08_17210 NZ_QFYX01000003.1 Protein Homology CDS 33330 34016 . + 0 ID=cds-WP_003416861.1;Parent=gene-DKM08_RS17225;Dbxref=GenBank:WP_003416861.1;Name=WP_003416861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217724.1;locus_tag=DKM08_RS17225;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416861.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 34003 34275 . - . ID=gene-DKM08_RS17230;Name=DKM08_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17230;old_locus_tag=DKM08_17215 NZ_QFYX01000003.1 Protein Homology CDS 34003 34275 . - 0 ID=cds-WP_003416863.1;Parent=gene-DKM08_RS17230;Dbxref=GenBank:WP_003416863.1;Name=WP_003416863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177943.1;locus_tag=DKM08_RS17230;product=DUF3107 domain-containing protein;protein_id=WP_003416863.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 34600 35160 . + . ID=gene-DKM08_RS17235;Name=DKM08_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17235;old_locus_tag=DKM08_17220 NZ_QFYX01000003.1 Protein Homology CDS 34600 35160 . + 0 ID=cds-WP_003416868.1;Parent=gene-DKM08_RS17235;Dbxref=GenBank:WP_003416868.1;Name=WP_003416868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217725.1;locus_tag=DKM08_RS17235;product=MmpS family transport accessory protein;protein_id=WP_003416868.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 35170 35865 . - . ID=gene-DKM08_RS17240;Name=DKM08_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17240;old_locus_tag=DKM08_17225 NZ_QFYX01000003.1 Protein Homology CDS 35170 35865 . - 0 ID=cds-WP_003416873.1;Parent=gene-DKM08_RS17240;Dbxref=GenBank:WP_003416873.1;Name=WP_003416873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217726.1;locus_tag=DKM08_RS17240;product=ferritin-like fold-containing protein;protein_id=WP_003416873.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 36124 37707 . + . ID=gene-DKM08_RS17245;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=DKM08_RS17245;old_locus_tag=DKM08_17230 NZ_QFYX01000003.1 Protein Homology CDS 36124 37707 . + 0 ID=cds-WP_003416875.1;Parent=gene-DKM08_RS17245;Dbxref=GenBank:WP_003416875.1;Name=WP_003416875.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;gene=rhlE;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217727.1;locus_tag=DKM08_RS17245;product=DEAD/DEAH box helicase;protein_id=WP_003416875.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 37720 38943 . + . ID=gene-DKM08_RS17250;Name=DKM08_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17250;old_locus_tag=DKM08_17235 NZ_QFYX01000003.1 Protein Homology CDS 37720 38943 . + 0 ID=cds-WP_010950851.1;Parent=gene-DKM08_RS17250;Dbxref=GenBank:WP_010950851.1;Name=WP_010950851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217728.1;locus_tag=DKM08_RS17250;product=hypothetical protein;protein_id=WP_010950851.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 39019 39819 . - . ID=gene-DKM08_RS17255;Name=DKM08_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17255;old_locus_tag=DKM08_17240 NZ_QFYX01000003.1 Protein Homology CDS 39019 39819 . - 0 ID=cds-WP_003901572.1;Parent=gene-DKM08_RS17255;Dbxref=GenBank:WP_003901572.1;Name=WP_003901572.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217729.1;locus_tag=DKM08_RS17255;product=ParA family protein;protein_id=WP_003901572.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 39973 40584 . + . ID=gene-DKM08_RS17260;Name=DKM08_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17260;old_locus_tag=DKM08_17245 NZ_QFYX01000003.1 Protein Homology CDS 39973 40584 . + 0 ID=cds-WP_003416878.1;Parent=gene-DKM08_RS17260;Dbxref=GenBank:WP_003416878.1;Name=WP_003416878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177944.1;locus_tag=DKM08_RS17260;product=acid phosphatase;protein_id=WP_003416878.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 40581 41699 . + . ID=gene-DKM08_RS17265;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=DKM08_RS17265;old_locus_tag=DKM08_17250 NZ_QFYX01000003.1 Protein Homology CDS 40581 41699 . + 0 ID=cds-WP_003416879.1;Parent=gene-DKM08_RS17265;Dbxref=GenBank:WP_003416879.1;Name=WP_003416879.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217731.1;locus_tag=DKM08_RS17265;product=isochorismate synthase;protein_id=WP_003416879.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 41696 42179 . + . ID=gene-DKM08_RS17270;Name=DKM08_RS17270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS17270;old_locus_tag=DKM08_17255;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 41696 42179 . + 0 ID=cds-DKM08_RS17270;Parent=gene-DKM08_RS17270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725920.1;locus_tag=DKM08_RS17270;product=N-acetyltransferase family protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 42131 42562 . - . ID=gene-DKM08_RS17275;Name=DKM08_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17275;old_locus_tag=DKM08_17260 NZ_QFYX01000003.1 Protein Homology CDS 42131 42562 . - 0 ID=cds-WP_003416881.1;Parent=gene-DKM08_RS17275;Dbxref=GenBank:WP_003416881.1;Name=WP_003416881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217733.1;locus_tag=DKM08_RS17275;product=hypothetical protein;protein_id=WP_003416881.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 42795 43760 . + . ID=gene-DKM08_RS17280;Name=DKM08_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17280;old_locus_tag=DKM08_17265 NZ_QFYX01000003.1 Protein Homology CDS 42795 43760 . + 0 ID=cds-WP_003416883.1;Parent=gene-DKM08_RS17280;Dbxref=GenBank:WP_003416883.1;Name=WP_003416883.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217734.1;locus_tag=DKM08_RS17280;product=diacylglycerol/lipid kinase family protein;protein_id=WP_003416883.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 44040 44294 . + . ID=gene-DKM08_RS17285;Name=whiB1;gbkey=Gene;gene=whiB1;gene_biotype=protein_coding;locus_tag=DKM08_RS17285;old_locus_tag=DKM08_17270 NZ_QFYX01000003.1 Protein Homology CDS 44040 44294 . + 0 ID=cds-WP_003416884.1;Parent=gene-DKM08_RS17285;Dbxref=GenBank:WP_003416884.1;Name=WP_003416884.1;gbkey=CDS;gene=whiB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416884.1;locus_tag=DKM08_RS17285;product=transcriptional regulator WhiB1;protein_id=WP_003416884.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 44356 45861 . - . ID=gene-DKM08_RS17290;Name=DKM08_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17290;old_locus_tag=DKM08_17275 NZ_QFYX01000003.1 Protein Homology CDS 44356 45861 . - 0 ID=cds-WP_010950852.1;Parent=gene-DKM08_RS17290;Dbxref=GenBank:WP_010950852.1;Name=WP_010950852.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217736.1;locus_tag=DKM08_RS17290;product=sensor histidine kinase;protein_id=WP_010950852.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 45878 46093 . - . ID=gene-DKM08_RS17295;Name=DKM08_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17295;old_locus_tag=DKM08_17280 NZ_QFYX01000003.1 Protein Homology CDS 45878 46093 . - 0 ID=cds-WP_003416887.1;Parent=gene-DKM08_RS17295;Dbxref=GenBank:WP_003416887.1;Name=WP_003416887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217737.1;locus_tag=DKM08_RS17295;product=biotin/lipoyl-binding carrier protein;protein_id=WP_003416887.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 46294 46368 . + . ID=gene-DKM08_RS22815;Name=DKM08_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22815;old_locus_tag=DKM08_17285 NZ_QFYX01000003.1 Protein Homology CDS 46294 46368 . + 0 ID=cds-WP_003416889.1;Parent=gene-DKM08_RS22815;Dbxref=GenBank:WP_003416889.1;Name=WP_003416889.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_149429506.1;locus_tag=DKM08_RS22815;product=50S ribosomal protein bL37;protein_id=WP_003416889.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 46378 46683 . - . ID=gene-DKM08_RS17305;Name=rsrA;gbkey=Gene;gene=rsrA;gene_biotype=protein_coding;locus_tag=DKM08_RS17305;old_locus_tag=DKM08_17290 NZ_QFYX01000003.1 Protein Homology CDS 46378 46683 . - 0 ID=cds-WP_003416891.1;Parent=gene-DKM08_RS17305;Dbxref=GenBank:WP_003416891.1;Name=WP_003416891.1;Ontology_term=GO:0045454,GO:0016989;gbkey=CDS;gene=rsrA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177945.1;locus_tag=DKM08_RS17305;product=mycothiol system anti-sigma-R factor;protein_id=WP_003416891.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 46680 47231 . - . ID=gene-DKM08_RS17310;Name=DKM08_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17310;old_locus_tag=DKM08_17295 NZ_QFYX01000003.1 Protein Homology CDS 46680 47231 . - 0 ID=cds-WP_003899976.1;Parent=gene-DKM08_RS17310;Dbxref=GenBank:WP_003899976.1;Name=WP_003899976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=DKM08_RS17310;product=hypothetical protein;protein_id=WP_003899976.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 47228 47878 . - . ID=gene-DKM08_RS17315;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=DKM08_RS17315;old_locus_tag=DKM08_17300 NZ_QFYX01000003.1 Protein Homology CDS 47228 47878 . - 0 ID=cds-WP_003416897.1;Parent=gene-DKM08_RS17315;Dbxref=GenBank:WP_003416897.1;Name=WP_003416897.1;gbkey=CDS;gene=sigH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217739.1;locus_tag=DKM08_RS17315;product=sigma-70 family RNA polymerase sigma factor SigH;protein_id=WP_003416897.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 48178 49026 . + . ID=gene-DKM08_RS17320;Name=DKM08_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17320;old_locus_tag=DKM08_17305 NZ_QFYX01000003.1 Protein Homology CDS 48178 49026 . + 0 ID=cds-WP_003416899.1;Parent=gene-DKM08_RS17320;Dbxref=GenBank:WP_003416899.1;Name=WP_003416899.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217740.1;locus_tag=DKM08_RS17320;product=SDR family oxidoreductase;protein_id=WP_003416899.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 48962 49150 . + . ID=gene-DKM08_RS22570;Name=DKM08_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22570 NZ_QFYX01000003.1 Protein Homology CDS 48962 49150 . + 0 ID=cds-WP_003416901.1;Parent=gene-DKM08_RS22570;Dbxref=GenBank:WP_003416901.1;Name=WP_003416901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294273.1;locus_tag=DKM08_RS22570;product=hypothetical protein;protein_id=WP_003416901.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 49128 49346 . + . ID=gene-DKM08_RS17330;Name=DKM08_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17330;old_locus_tag=DKM08_17315 NZ_QFYX01000003.1 Protein Homology CDS 49128 49346 . + 0 ID=cds-WP_003416902.1;Parent=gene-DKM08_RS17330;Dbxref=GenBank:WP_003416902.1;Name=WP_003416902.1;Ontology_term=GO:0002161;gbkey=CDS;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416902.1;locus_tag=DKM08_RS17330;product=YbaK/EbsC family protein;protein_id=WP_003416902.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 49343 50767 . - . ID=gene-DKM08_RS17335;Name=DKM08_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17335;old_locus_tag=DKM08_17320 NZ_QFYX01000003.1 Protein Homology CDS 49343 50767 . - 0 ID=cds-WP_003416904.1;Parent=gene-DKM08_RS17335;Dbxref=GenBank:WP_003416904.1;Name=WP_003416904.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217742.1;locus_tag=DKM08_RS17335;product=GNAT family N-acetyltransferase;protein_id=WP_003416904.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 50891 51649 . - . ID=gene-DKM08_RS17340;Name=DKM08_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17340;old_locus_tag=DKM08_17325 NZ_QFYX01000003.1 Protein Homology CDS 50891 51649 . - 0 ID=cds-WP_003416907.1;Parent=gene-DKM08_RS17340;Dbxref=GenBank:WP_003416907.1;Name=WP_003416907.1;Ontology_term=GO:0009432,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217743.1;locus_tag=DKM08_RS17340;product=SOS response-associated peptidase;protein_id=WP_003416907.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 51704 53056 . + . ID=gene-DKM08_RS17345;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=DKM08_RS17345;old_locus_tag=DKM08_17330 NZ_QFYX01000003.1 Protein Homology CDS 51704 53056 . + 0 ID=cds-WP_010950853.1;Parent=gene-DKM08_RS17345;Dbxref=GenBank:WP_010950853.1;Name=WP_010950853.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217744.1;locus_tag=DKM08_RS17345;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_010950853.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 53053 54045 . + . ID=gene-DKM08_RS17350;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=DKM08_RS17350;old_locus_tag=DKM08_17335 NZ_QFYX01000003.1 Protein Homology CDS 53053 54045 . + 0 ID=cds-WP_003416916.1;Parent=gene-DKM08_RS17350;Dbxref=GenBank:WP_003416916.1;Name=WP_003416916.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217745.1;locus_tag=DKM08_RS17350;product=ribosome small subunit-dependent GTPase A;protein_id=WP_003416916.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 54078 55361 . - . ID=gene-DKM08_RS17355;Name=desA3;gbkey=Gene;gene=desA3;gene_biotype=protein_coding;locus_tag=DKM08_RS17355;old_locus_tag=DKM08_17340 NZ_QFYX01000003.1 Protein Homology CDS 54078 55361 . - 0 ID=cds-WP_003416919.1;Parent=gene-DKM08_RS17355;Dbxref=GenBank:WP_003416919.1;Name=WP_003416919.1;gbkey=CDS;gene=desA3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177948.1;locus_tag=DKM08_RS17355;product=NADPH-dependent stearoyl-CoA 9-desaturase;protein_id=WP_003416919.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 55439 56581 . - . ID=gene-DKM08_RS17360;Name=DKM08_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17360;old_locus_tag=DKM08_17345 NZ_QFYX01000003.1 Protein Homology CDS 55439 56581 . - 0 ID=cds-WP_010950854.1;Parent=gene-DKM08_RS17360;Dbxref=GenBank:WP_010950854.1;Name=WP_010950854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217747.1;locus_tag=DKM08_RS17360;product=NADPH oxidoreductase;protein_id=WP_010950854.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 56691 57200 . - . ID=gene-DKM08_RS17365;Name=DKM08_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17365;old_locus_tag=DKM08_17350 NZ_QFYX01000003.1 Protein Homology CDS 56691 57200 . - 0 ID=cds-WP_003416925.1;Parent=gene-DKM08_RS17365;Dbxref=GenBank:WP_003416925.1;Name=WP_003416925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217748.1;locus_tag=DKM08_RS17365;product=DUF6912 family protein;protein_id=WP_003416925.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 57197 58063 . - . ID=gene-DKM08_RS17370;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=DKM08_RS17370;old_locus_tag=DKM08_17355 NZ_QFYX01000003.1 Protein Homology CDS 57197 58063 . - 0 ID=cds-WP_009938021.1;Parent=gene-DKM08_RS17370;Dbxref=GenBank:WP_009938021.1;Name=WP_009938021.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020788356.1;locus_tag=DKM08_RS17370;product=polyphosphate kinase 2;protein_id=WP_009938021.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 58108 59517 . - . ID=gene-DKM08_RS17375;Name=DKM08_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17375;old_locus_tag=DKM08_17360 NZ_QFYX01000003.1 Protein Homology CDS 58108 59517 . - 0 ID=cds-WP_023349607.1;Parent=gene-DKM08_RS17375;Dbxref=GenBank:WP_023349607.1;Name=WP_023349607.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001636.1;locus_tag=DKM08_RS17375;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_023349607.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 59718 60269 . + . ID=gene-DKM08_RS17380;Name=DKM08_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17380;old_locus_tag=DKM08_17365 NZ_QFYX01000003.1 Protein Homology CDS 59718 60269 . + 0 ID=cds-WP_003912151.1;Parent=gene-DKM08_RS17380;Dbxref=GenBank:WP_003912151.1;Name=WP_003912151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291303.1;locus_tag=DKM08_RS17380;product=Rv3235 family protein;protein_id=WP_003912151.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 60287 61444 . - . ID=gene-DKM08_RS17385;Name=DKM08_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17385;old_locus_tag=DKM08_17370 NZ_QFYX01000003.1 Protein Homology CDS 60287 61444 . - 0 ID=cds-WP_003416933.1;Parent=gene-DKM08_RS17385;Dbxref=GenBank:WP_003416933.1;Name=WP_003416933.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177949.1;locus_tag=DKM08_RS17385;product=cation:proton antiporter;protein_id=WP_003416933.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 61449 61931 . - . ID=gene-DKM08_RS17390;Name=DKM08_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17390;old_locus_tag=DKM08_17375 NZ_QFYX01000003.1 Protein Homology CDS 61449 61931 . - 0 ID=cds-WP_003899982.1;Parent=gene-DKM08_RS17390;Dbxref=GenBank:WP_003899982.1;Name=WP_003899982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217754.1;locus_tag=DKM08_RS17390;product=cation:proton antiporter regulatory subunit;protein_id=WP_003899982.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 61992 62726 . - . ID=gene-DKM08_RS17395;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=DKM08_RS17395;old_locus_tag=DKM08_17380 NZ_QFYX01000003.1 Protein Homology CDS 61992 62726 . - 0 ID=cds-WP_003416945.1;Parent=gene-DKM08_RS17395;Dbxref=GenBank:WP_003416945.1;Name=WP_003416945.1;Ontology_term=GO:0008168;gbkey=CDS;gene=mddA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217755.1;locus_tag=DKM08_RS17395;product=methanethiol S-methyltransferase;protein_id=WP_003416945.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 62785 65931 . - . ID=gene-DKM08_RS17400;Name=DKM08_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17400;old_locus_tag=DKM08_17385 NZ_QFYX01000003.1 Protein Homology CDS 62785 65931 . - 0 ID=cds-WP_003900661.1;Parent=gene-DKM08_RS17400;Dbxref=GenBank:WP_003900661.1;Name=WP_003900661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217756.1;locus_tag=DKM08_RS17400;product=MFS transporter;protein_id=WP_003900661.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 66010 68859 . - . ID=gene-DKM08_RS17405;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=DKM08_RS17405;old_locus_tag=DKM08_17390 NZ_QFYX01000003.1 Protein Homology CDS 66010 68859 . - 0 ID=cds-WP_003901576.1;Parent=gene-DKM08_RS17405;Dbxref=GenBank:WP_003901576.1;Name=WP_003901576.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177950.1;locus_tag=DKM08_RS17405;product=preprotein translocase subunit SecA;protein_id=WP_003901576.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 68938 69582 . - . ID=gene-DKM08_RS17410;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=DKM08_RS17410;old_locus_tag=DKM08_17395 NZ_QFYX01000003.1 Protein Homology CDS 68938 69582 . - 0 ID=cds-WP_003416957.1;Parent=gene-DKM08_RS17410;Dbxref=GenBank:WP_003416957.1;Name=WP_003416957.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217758.3;locus_tag=DKM08_RS17410;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_003416957.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 69898 70539 . - . ID=gene-DKM08_RS17415;Name=DKM08_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17415;old_locus_tag=DKM08_17400 NZ_QFYX01000003.1 Protein Homology CDS 69898 70539 . - 0 ID=cds-WP_003416963.1;Parent=gene-DKM08_RS17415;Dbxref=GenBank:WP_003416963.1;Name=WP_003416963.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217759.1;locus_tag=DKM08_RS17415;product=ComF family protein;protein_id=WP_003416963.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 70577 71419 . - . ID=gene-DKM08_RS17420;Name=DKM08_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17420;old_locus_tag=DKM08_17405 NZ_QFYX01000003.1 Protein Homology CDS 70577 71419 . - 0 ID=cds-WP_003416966.1;Parent=gene-DKM08_RS17420;Dbxref=GenBank:WP_003416966.1;Name=WP_003416966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217760.1;locus_tag=DKM08_RS17420;product=LmeA family phospholipid-binding protein;protein_id=WP_003416966.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 71487 73238 . - . ID=gene-DKM08_RS17425;Name=lpqB;gbkey=Gene;gene=lpqB;gene_biotype=protein_coding;locus_tag=DKM08_RS17425;old_locus_tag=DKM08_17410 NZ_QFYX01000003.1 Protein Homology CDS 71487 73238 . - 0 ID=cds-WP_010950856.1;Parent=gene-DKM08_RS17425;Dbxref=GenBank:WP_010950856.1;Name=WP_010950856.1;gbkey=CDS;gene=lpqB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217761.1;locus_tag=DKM08_RS17425;product=MtrAB system accessory lipoprotein LpqB;protein_id=WP_010950856.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 73238 74941 . - . ID=gene-DKM08_RS17430;Name=mtrB;gbkey=Gene;gene=mtrB;gene_biotype=protein_coding;locus_tag=DKM08_RS17430;old_locus_tag=DKM08_17415 NZ_QFYX01000003.1 Protein Homology CDS 73238 74941 . - 0 ID=cds-WP_003416988.1;Parent=gene-DKM08_RS17430;Dbxref=GenBank:WP_003416988.1;Name=WP_003416988.1;gbkey=CDS;gene=mtrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217762.1;locus_tag=DKM08_RS17430;product=two-component system sensor histidine kinase MtrB;protein_id=WP_003416988.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 74991 75677 . - . ID=gene-DKM08_RS17435;Name=mtrA;gbkey=Gene;gene=mtrA;gene_biotype=protein_coding;locus_tag=DKM08_RS17435;old_locus_tag=DKM08_17420 NZ_QFYX01000003.1 Protein Homology CDS 74991 75677 . - 0 ID=cds-WP_003899985.1;Parent=gene-DKM08_RS17435;Dbxref=GenBank:WP_003899985.1;Name=WP_003899985.1;gbkey=CDS;gene=mtrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217763.1;locus_tag=DKM08_RS17435;product=two-component system response regulator MtrA;protein_id=WP_003899985.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 75747 76397 . - . ID=gene-DKM08_RS17440;Name=tmk;end_range=76397,.;gbkey=Gene;gene=tmk;gene_biotype=pseudogene;locus_tag=DKM08_RS17440;old_locus_tag=DKM08_17425;partial=true;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 75747 76397 . - 0 ID=cds-DKM08_RS17440;Parent=gene-DKM08_RS17440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006233,GO:0004798,GO:0005524;end_range=76397,.;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217764.1;locus_tag=DKM08_RS17440;partial=true;product=dTMP kinase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 76488 77975 . - . ID=gene-DKM08_RS17445;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=DKM08_RS17445;old_locus_tag=DKM08_17430 NZ_QFYX01000003.1 Protein Homology CDS 76488 77975 . - 0 ID=cds-WP_010950857.1;Parent=gene-DKM08_RS17445;Dbxref=GenBank:WP_010950857.1;Name=WP_010950857.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217765.1;locus_tag=DKM08_RS17445;product=adenosylhomocysteinase;protein_id=WP_010950857.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 78080 78715 . - . ID=gene-DKM08_RS17450;Name=DKM08_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17450;old_locus_tag=DKM08_17435 NZ_QFYX01000003.1 Protein Homology CDS 78080 78715 . - 0 ID=cds-WP_003417042.1;Parent=gene-DKM08_RS17450;Dbxref=GenBank:WP_003417042.1;Name=WP_003417042.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217766.1;locus_tag=DKM08_RS17450;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417042.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 78712 78894 . - . ID=gene-DKM08_RS17455;Name=rubB;gbkey=Gene;gene=rubB;gene_biotype=protein_coding;locus_tag=DKM08_RS17455;old_locus_tag=DKM08_17440 NZ_QFYX01000003.1 Protein Homology CDS 78712 78894 . - 0 ID=cds-WP_003417044.1;Parent=gene-DKM08_RS17455;Dbxref=GenBank:WP_003417044.1;Name=WP_003417044.1;gbkey=CDS;gene=rubB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217767.1;locus_tag=DKM08_RS17455;product=rubredoxin RubB;protein_id=WP_003417044.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 78899 79066 . - . ID=gene-DKM08_RS17460;Name=rubA;gbkey=Gene;gene=rubA;gene_biotype=protein_coding;locus_tag=DKM08_RS17460;old_locus_tag=DKM08_17445 NZ_QFYX01000003.1 Protein Homology CDS 78899 79066 . - 0 ID=cds-WP_003417045.1;Parent=gene-DKM08_RS17460;Dbxref=GenBank:WP_003417045.1;Name=WP_003417045.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;gene=rubA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217768.1;locus_tag=DKM08_RS17460;product=rubredoxin;protein_id=WP_003417045.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 79066 80316 . - . ID=gene-DKM08_RS17465;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=DKM08_RS17465;old_locus_tag=DKM08_17450 NZ_QFYX01000003.1 Protein Homology CDS 79066 80316 . - 0 ID=cds-WP_003417047.1;Parent=gene-DKM08_RS17465;Dbxref=GenBank:WP_003417047.1;Name=WP_003417047.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217769.1;locus_tag=DKM08_RS17465;product=alkane 1-monooxygenase;protein_id=WP_003417047.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 80425 81912 . - . ID=gene-DKM08_RS17470;Name=DKM08_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17470;old_locus_tag=DKM08_17455 NZ_QFYX01000003.1 Protein Homology CDS 80425 81912 . - 0 ID=cds-WP_023349608.1;Parent=gene-DKM08_RS17470;Dbxref=GenBank:WP_023349608.1;Name=WP_023349608.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217770.1;locus_tag=DKM08_RS17470;product=amino acid permease;protein_id=WP_023349608.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 82003 83391 . + . ID=gene-DKM08_RS17475;Name=DKM08_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17475;old_locus_tag=DKM08_17460 NZ_QFYX01000003.1 Protein Homology CDS 82003 83391 . + 0 ID=cds-WP_003417051.1;Parent=gene-DKM08_RS17475;Dbxref=GenBank:WP_003417051.1;Name=WP_003417051.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217771.1;locus_tag=DKM08_RS17475;product=FAD-dependent oxidoreductase;protein_id=WP_003417051.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 83369 84595 . - . ID=gene-DKM08_RS17480;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=DKM08_RS17480;old_locus_tag=DKM08_17465 NZ_QFYX01000003.1 Protein Homology CDS 83369 84595 . - 0 ID=cds-WP_003417054.1;Parent=gene-DKM08_RS17480;Dbxref=GenBank:WP_003417054.1;Name=WP_003417054.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217772.1;locus_tag=DKM08_RS17480;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_003417054.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 84603 85643 . - . ID=gene-DKM08_RS17485;Name=DKM08_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17485;old_locus_tag=DKM08_17470 NZ_QFYX01000003.1 Protein Homology CDS 84603 85643 . - 0 ID=cds-WP_003417056.1;Parent=gene-DKM08_RS17485;Dbxref=GenBank:WP_003417056.1;Name=WP_003417056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217773.1;locus_tag=DKM08_RS17485;product=hypothetical protein;protein_id=WP_003417056.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 85640 87037 . - . ID=gene-DKM08_RS17490;Name=pmmA;gbkey=Gene;gene=pmmA;gene_biotype=protein_coding;locus_tag=DKM08_RS17490;old_locus_tag=DKM08_17475 NZ_QFYX01000003.1 Protein Homology CDS 85640 87037 . - 0 ID=cds-WP_003901581.1;Parent=gene-DKM08_RS17490;Dbxref=GenBank:WP_003901581.1;Name=WP_003901581.1;Ontology_term=GO:0005975,GO:0016868;gbkey=CDS;gene=pmmA;go_function=intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217774.1;locus_tag=DKM08_RS17490;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_003901581.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 87139 87579 . - . ID=gene-DKM08_RS17495;Name=DKM08_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17495;old_locus_tag=DKM08_17480 NZ_QFYX01000003.1 Protein Homology CDS 87139 87579 . - 0 ID=cds-WP_180744027.1;Parent=gene-DKM08_RS17495;Dbxref=GenBank:WP_180744027.1;Name=WP_180744027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014208879.1;locus_tag=DKM08_RS17495;product=DUF3499 domain-containing protein;protein_id=WP_180744027.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 87753 88172 . + . ID=gene-DKM08_RS17500;Name=DKM08_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17500;old_locus_tag=DKM08_17485 NZ_QFYX01000003.1 Protein Homology CDS 87753 88172 . + 0 ID=cds-WP_003417076.1;Parent=gene-DKM08_RS17500;Dbxref=GenBank:WP_003417076.1;Name=WP_003417076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217776.1;locus_tag=DKM08_RS17500;product=metallopeptidase family protein;protein_id=WP_003417076.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 88200 88544 . - . ID=gene-DKM08_RS17505;Name=DKM08_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17505;old_locus_tag=DKM08_17490 NZ_QFYX01000003.1 Protein Homology CDS 88200 88544 . - 0 ID=cds-WP_003900662.1;Parent=gene-DKM08_RS17505;Dbxref=GenBank:WP_003900662.1;Name=WP_003900662.1;Ontology_term=GO:0003677,GO:0046872,GO:0051536,GO:0051539;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725952.1;locus_tag=DKM08_RS17505;product=WhiB family transcriptional regulator;protein_id=WP_003900662.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 88871 89866 . + . ID=gene-DKM08_RS17515;Name=cofD;gbkey=Gene;gene=cofD;gene_biotype=protein_coding;locus_tag=DKM08_RS17515;old_locus_tag=DKM08_17500 NZ_QFYX01000003.1 Protein Homology CDS 88871 89866 . + 0 ID=cds-WP_003417087.1;Parent=gene-DKM08_RS17515;Dbxref=GenBank:WP_003417087.1;Name=WP_003417087.1;Ontology_term=GO:0000287,GO:0043743;gbkey=CDS;gene=cofD;go_function=magnesium ion binding|0000287||IEA,LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217778.1;locus_tag=DKM08_RS17515;product=2-phospho-L-lactate transferase;protein_id=WP_003417087.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 89863 91209 . + . ID=gene-DKM08_RS17520;Name=fbiB;gbkey=Gene;gene=fbiB;gene_biotype=protein_coding;locus_tag=DKM08_RS17520;old_locus_tag=DKM08_17505 NZ_QFYX01000003.1 Protein Homology CDS 89863 91209 . + 0 ID=cds-WP_003900663.1;Parent=gene-DKM08_RS17520;Dbxref=GenBank:WP_003900663.1;Name=WP_003900663.1;Ontology_term=GO:0043773,GO:0046872;gbkey=CDS;gene=fbiB;go_function=coenzyme F420-0 gamma-glutamyl ligase activity|0043773||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217779.1;locus_tag=DKM08_RS17520;product=coenzyme F420-0:L-glutamate ligase;protein_id=WP_003900663.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 91505 93166 . + . ID=gene-DKM08_RS17530;Name=DKM08_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17530;old_locus_tag=DKM08_17515 NZ_QFYX01000003.1 Protein Homology CDS 91505 93166 . + 0 ID=cds-WP_003417095.1;Parent=gene-DKM08_RS17530;Dbxref=GenBank:WP_003417095.1;Name=WP_003417095.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217780.1;locus_tag=DKM08_RS17530;product=class I SAM-dependent methyltransferase;protein_id=WP_003417095.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 93226 94305 . - . ID=gene-DKM08_RS17535;Name=manB;gbkey=Gene;gene=manB;gene_biotype=protein_coding;locus_tag=DKM08_RS17535;old_locus_tag=DKM08_17520 NZ_QFYX01000003.1 Protein Homology CDS 93226 94305 . - 0 ID=cds-WP_003417097.1;Parent=gene-DKM08_RS17535;Dbxref=GenBank:WP_003417097.1;Name=WP_003417097.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;gene=manB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177951.1;locus_tag=DKM08_RS17535;product=sugar phosphate nucleotidyltransferase;protein_id=WP_003417097.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 94307 95200 . - . ID=gene-DKM08_RS17540;Name=wbbL;gbkey=Gene;gene=wbbL;gene_biotype=protein_coding;locus_tag=DKM08_RS17540;old_locus_tag=DKM08_17525 NZ_QFYX01000003.1 Protein Homology CDS 94307 95200 . - 0 ID=cds-WP_003417100.1;Parent=gene-DKM08_RS17540;Dbxref=GenBank:WP_003417100.1;Name=WP_003417100.1;gbkey=CDS;gene=wbbL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177952.3;locus_tag=DKM08_RS17540;product=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;protein_id=WP_003417100.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 95211 96125 . - . ID=gene-DKM08_RS17545;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=DKM08_RS17545;old_locus_tag=DKM08_17530 NZ_QFYX01000003.1 Protein Homology CDS 95211 96125 . - 0 ID=cds-WP_003417101.1;Parent=gene-DKM08_RS17545;Dbxref=GenBank:WP_003417101.1;Name=WP_003417101.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217783.1;locus_tag=DKM08_RS17545;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_003417101.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 96201 97697 . + . ID=gene-DKM08_RS17550;Name=lcp1;gbkey=Gene;gene=lcp1;gene_biotype=protein_coding;locus_tag=DKM08_RS17550;old_locus_tag=DKM08_17535 NZ_QFYX01000003.1 Protein Homology CDS 96201 97697 . + 0 ID=cds-WP_003417107.1;Parent=gene-DKM08_RS17550;Dbxref=GenBank:WP_003417107.1;Name=WP_003417107.1;gbkey=CDS;gene=lcp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217784.1;locus_tag=DKM08_RS17550;product=phosphotransferase Lcp1;protein_id=WP_003417107.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 97685 98425 . + . ID=gene-DKM08_RS17555;Name=DKM08_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17555;old_locus_tag=DKM08_17540 NZ_QFYX01000003.1 Protein Homology CDS 97685 98425 . + 0 ID=cds-WP_023349609.1;Parent=gene-DKM08_RS17555;Dbxref=GenBank:WP_023349609.1;Name=WP_023349609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899994.1;locus_tag=DKM08_RS17555;product=TIGR03089 family protein;protein_id=WP_023349609.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 98550 98831 . + . ID=gene-DKM08_RS17560;Name=DKM08_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17560;old_locus_tag=DKM08_17545 NZ_QFYX01000003.1 Protein Homology CDS 98550 98831 . + 0 ID=cds-WP_003417115.1;Parent=gene-DKM08_RS17560;Dbxref=GenBank:WP_003417115.1;Name=WP_003417115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217786.1;locus_tag=DKM08_RS17560;product=DUF1490 family protein;protein_id=WP_003417115.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 98842 100998 . + . ID=gene-DKM08_RS17565;Name=ctpC;gbkey=Gene;gene=ctpC;gene_biotype=protein_coding;locus_tag=DKM08_RS17565;old_locus_tag=DKM08_17550 NZ_QFYX01000003.1 Protein Homology CDS 98842 100998 . + 0 ID=cds-WP_003899995.1;Parent=gene-DKM08_RS17565;Dbxref=GenBank:WP_003899995.1;Name=WP_003899995.1;gbkey=CDS;gene=ctpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217787.1;locus_tag=DKM08_RS17565;product=manganese-exporting P-type ATPase CtpC;protein_id=WP_003899995.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 100995 101663 . - . ID=gene-DKM08_RS17570;Name=DKM08_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17570;old_locus_tag=DKM08_17555 NZ_QFYX01000003.1 Protein Homology CDS 100995 101663 . - 0 ID=cds-WP_003417119.1;Parent=gene-DKM08_RS17570;Dbxref=GenBank:WP_003417119.1;Name=WP_003417119.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217788.1;locus_tag=DKM08_RS17570;product=cation transporter;protein_id=WP_003417119.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 101764 102948 . + . ID=gene-DKM08_RS17575;Name=DKM08_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17575;old_locus_tag=DKM08_17560 NZ_QFYX01000003.1 Protein Homology CDS 101764 102948 . + 0 ID=cds-WP_010950858.1;Parent=gene-DKM08_RS17575;Dbxref=GenBank:WP_010950858.1;Name=WP_010950858.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217789.1;locus_tag=DKM08_RS17575;product=CoA transferase;protein_id=WP_010950858.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 102977 105247 . + . ID=gene-DKM08_RS17580;Name=DKM08_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17580;old_locus_tag=DKM08_17565 NZ_QFYX01000003.1 Protein Homology CDS 102977 105247 . + 0 ID=cds-WP_003917141.1;Parent=gene-DKM08_RS17580;Dbxref=GenBank:WP_003917141.1;Name=WP_003917141.1;Ontology_term=GO:1902358,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303796.1;locus_tag=DKM08_RS17580;product=SulP family inorganic anion transporter;protein_id=WP_003917141.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 105236 106405 . - . ID=gene-DKM08_RS17585;Name=DKM08_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17585;old_locus_tag=DKM08_17570 NZ_QFYX01000003.1 Protein Homology CDS 105236 106405 . - 0 ID=cds-WP_003417122.1;Parent=gene-DKM08_RS17585;Dbxref=GenBank:WP_003417122.1;Name=WP_003417122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217791.1;locus_tag=DKM08_RS17585;product=acyl-CoA dehydrogenase;protein_id=WP_003417122.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 106430 106954 . - . ID=gene-DKM08_RS17590;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=DKM08_RS17590;old_locus_tag=DKM08_17575 NZ_QFYX01000003.1 Protein Homology CDS 106430 106954 . - 0 ID=cds-WP_003417123.1;Parent=gene-DKM08_RS17590;Dbxref=GenBank:WP_003417123.1;Name=WP_003417123.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217792.1;locus_tag=DKM08_RS17590;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_003417123.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 106951 108240 . - . ID=gene-DKM08_RS17595;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=DKM08_RS17595;old_locus_tag=DKM08_17580 NZ_QFYX01000003.1 Protein Homology CDS 106951 108240 . - 0 ID=cds-WP_003417126.1;Parent=gene-DKM08_RS17595;Dbxref=GenBank:WP_003417126.1;Name=WP_003417126.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=DKM08_RS17595;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_003417126.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 108341 109012 . + . ID=gene-DKM08_RS17600;Name=DKM08_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17600;old_locus_tag=DKM08_17585 NZ_QFYX01000003.1 Protein Homology CDS 108341 109012 . + 0 ID=cds-WP_019283550.1;Parent=gene-DKM08_RS17600;Dbxref=GenBank:WP_019283550.1;Name=WP_019283550.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283550.1;locus_tag=DKM08_RS17600;product=GtrA family protein;protein_id=WP_019283550.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 108967 109485 . - . ID=gene-DKM08_RS17605;Name=DKM08_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17605;old_locus_tag=DKM08_17590 NZ_QFYX01000003.1 Protein Homology CDS 108967 109485 . - 0 ID=cds-WP_010950860.1;Parent=gene-DKM08_RS17605;Dbxref=GenBank:WP_010950860.1;Name=WP_010950860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217795.1;locus_tag=DKM08_RS17605;product=PH domain-containing protein;protein_id=WP_010950860.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 109528 110328 . - . ID=gene-DKM08_RS17610;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=DKM08_RS17610;old_locus_tag=DKM08_17595 NZ_QFYX01000003.1 Protein Homology CDS 109528 110328 . - 0 ID=cds-WP_003417133.1;Parent=gene-DKM08_RS17610;Dbxref=GenBank:WP_003417133.1;Name=WP_003417133.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217796.1;locus_tag=DKM08_RS17610;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_003417133.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 110378 112024 . + . ID=gene-DKM08_RS17615;Name=DKM08_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17615;old_locus_tag=DKM08_17600 NZ_QFYX01000003.1 Protein Homology CDS 110378 112024 . + 0 ID=cds-WP_010950861.1;Parent=gene-DKM08_RS17615;Dbxref=GenBank:WP_010950861.1;Name=WP_010950861.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217797.1;locus_tag=DKM08_RS17615;product=acyl-CoA carboxylase subunit beta;protein_id=WP_010950861.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 112005 112475 . + . ID=gene-DKM08_RS17620;Name=DKM08_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17620;old_locus_tag=DKM08_17605 NZ_QFYX01000003.1 Protein Homology CDS 112005 112475 . + 0 ID=cds-WP_003900000.1;Parent=gene-DKM08_RS17620;Dbxref=GenBank:WP_003900000.1;Name=WP_003900000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217798.1;locus_tag=DKM08_RS17620;product=acyl-CoA carboxylase subunit epsilon;protein_id=WP_003900000.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 112472 113140 . + . ID=gene-DKM08_RS17625;Name=DKM08_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17625;old_locus_tag=DKM08_17610 NZ_QFYX01000003.1 Protein Homology CDS 112472 113140 . + 0 ID=cds-WP_010950862.1;Parent=gene-DKM08_RS17625;Dbxref=GenBank:WP_010950862.1;Name=WP_010950862.1;Ontology_term=GO:0009117,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217799.1;locus_tag=DKM08_RS17625;product=nucleoside triphosphate pyrophosphatase;protein_id=WP_010950862.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 113181 114074 . + . ID=gene-DKM08_RS17630;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=DKM08_RS17630;old_locus_tag=DKM08_17615 NZ_QFYX01000003.1 Protein Homology CDS 113181 114074 . + 0 ID=cds-WP_003417149.1;Parent=gene-DKM08_RS17630;Dbxref=GenBank:WP_003417149.1;Name=WP_003417149.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseA;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217800.1;locus_tag=DKM08_RS17630;product=sulfurtransferase;protein_id=WP_003417149.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 114071 114502 . + . ID=gene-DKM08_RS17635;Name=DKM08_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17635;old_locus_tag=DKM08_17620 NZ_QFYX01000003.1 Protein Homology CDS 114071 114502 . + 0 ID=cds-WP_003417152.1;Parent=gene-DKM08_RS17635;Dbxref=GenBank:WP_003417152.1;Name=WP_003417152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217801.1;locus_tag=DKM08_RS17635;product=SufE family protein;protein_id=WP_003417152.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 114610 116412 . + . ID=gene-DKM08_RS17640;Name=DKM08_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17640;old_locus_tag=DKM08_17625 NZ_QFYX01000003.1 Protein Homology CDS 114610 116412 . + 0 ID=cds-WP_003417156.1;Parent=gene-DKM08_RS17640;Dbxref=GenBank:WP_003417156.1;Name=WP_003417156.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217802.1;locus_tag=DKM08_RS17640;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003417156.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 116422 117207 . - . ID=gene-DKM08_RS17645;Name=sigF;gbkey=Gene;gene=sigF;gene_biotype=protein_coding;locus_tag=DKM08_RS17645;old_locus_tag=DKM08_17630 NZ_QFYX01000003.1 Protein Homology CDS 116422 117207 . - 0 ID=cds-WP_003417158.1;Parent=gene-DKM08_RS17645;Dbxref=GenBank:WP_003417158.1;Name=WP_003417158.1;gbkey=CDS;gene=sigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217803.1;locus_tag=DKM08_RS17645;product=RNA polymerase sigma factor SigF;protein_id=WP_003417158.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 117204 117641 . - . ID=gene-DKM08_RS17650;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=DKM08_RS17650;old_locus_tag=DKM08_17635 NZ_QFYX01000003.1 Protein Homology CDS 117204 117641 . - 0 ID=cds-WP_003417160.1;Parent=gene-DKM08_RS17650;Dbxref=GenBank:WP_003417160.1;Name=WP_003417160.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217804.4;locus_tag=DKM08_RS17650;product=anti-sigma B factor RsbW;protein_id=WP_003417160.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 117839 118150 . - . ID=gene-DKM08_RS17655;Name=usfY;gbkey=Gene;gene=usfY;gene_biotype=protein_coding;locus_tag=DKM08_RS17655;old_locus_tag=DKM08_17640 NZ_QFYX01000003.1 Protein Homology CDS 117839 118150 . - 0 ID=cds-WP_003900003.1;Parent=gene-DKM08_RS17655;Dbxref=GenBank:WP_003900003.1;Name=WP_003900003.1;gbkey=CDS;gene=usfY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900003.1;locus_tag=DKM08_RS17655;product=protein UsfY;protein_id=WP_003900003.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 118287 118664 . - . ID=gene-DKM08_RS17660;Name=DKM08_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17660;old_locus_tag=DKM08_17645 NZ_QFYX01000003.1 Protein Homology CDS 118287 118664 . - 0 ID=cds-WP_003417165.1;Parent=gene-DKM08_RS17660;Dbxref=GenBank:WP_003417165.1;Name=WP_003417165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217806.1;locus_tag=DKM08_RS17660;product=hypothetical protein;protein_id=WP_003417165.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 118698 120047 . - . ID=gene-DKM08_RS17665;Name=lat;gbkey=Gene;gene=lat;gene_biotype=protein_coding;locus_tag=DKM08_RS17665;old_locus_tag=DKM08_17650 NZ_QFYX01000003.1 Protein Homology CDS 118698 120047 . - 0 ID=cds-WP_003900004.1;Parent=gene-DKM08_RS17665;Dbxref=GenBank:WP_003900004.1;Name=WP_003900004.1;Ontology_term=GO:0017000,GO:0030170,GO:0045484;gbkey=CDS;gene=lat;go_function=pyridoxal phosphate binding|0030170||IEA,L-lysine 6-transaminase activity|0045484||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217807.1;locus_tag=DKM08_RS17665;product=L-lysine 6-transaminase;protein_id=WP_003900004.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 120098 120550 . - . ID=gene-DKM08_RS17670;Name=lrpA;gbkey=Gene;gene=lrpA;gene_biotype=protein_coding;locus_tag=DKM08_RS17670;old_locus_tag=DKM08_17655 NZ_QFYX01000003.1 Protein Homology CDS 120098 120550 . - 0 ID=cds-WP_010950864.1;Parent=gene-DKM08_RS17670;Dbxref=GenBank:WP_010950864.1;Name=WP_010950864.1;gbkey=CDS;gene=lrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217808.1;locus_tag=DKM08_RS17670;product=transcriptional regulator LrpA;protein_id=WP_010950864.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 120581 121828 . + . ID=gene-DKM08_RS17675;Name=DKM08_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17675;old_locus_tag=DKM08_17660 NZ_QFYX01000003.1 Protein Homology CDS 120581 121828 . + 0 ID=cds-WP_003417184.1;Parent=gene-DKM08_RS17675;Dbxref=GenBank:WP_003417184.1;Name=WP_003417184.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217809.1;locus_tag=DKM08_RS17675;product=VOC family protein;protein_id=WP_003417184.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 121828 123339 . + . ID=gene-DKM08_RS17680;Name=pcd;gbkey=Gene;gene=pcd;gene_biotype=protein_coding;locus_tag=DKM08_RS17680;old_locus_tag=DKM08_17665 NZ_QFYX01000003.1 Protein Homology CDS 121828 123339 . + 0 ID=cds-WP_031657342.1;Parent=gene-DKM08_RS17680;Dbxref=GenBank:WP_031657342.1;Name=WP_031657342.1;gbkey=CDS;gene=pcd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383207.1;locus_tag=DKM08_RS17680;product=aldehyde dehydrogenase family protein;protein_id=WP_031657342.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 123439 124188 . - . ID=gene-DKM08_RS17685;Name=DKM08_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17685;old_locus_tag=DKM08_17670 NZ_QFYX01000003.1 Protein Homology CDS 123439 124188 . - 0 ID=cds-WP_003900005.1;Parent=gene-DKM08_RS17685;Dbxref=GenBank:WP_003900005.1;Name=WP_003900005.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF025019.6;locus_tag=DKM08_RS17685;product=ATP-binding protein;protein_id=WP_003900005.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 124319 124984 . + . ID=gene-DKM08_RS17690;Name=DKM08_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17690;old_locus_tag=DKM08_17675 NZ_QFYX01000003.1 Protein Homology CDS 124319 124984 . + 0 ID=cds-WP_003417200.1;Parent=gene-DKM08_RS17690;Dbxref=GenBank:WP_003417200.1;Name=WP_003417200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217812.1;locus_tag=DKM08_RS17690;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417200.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 125028 129569 . + . ID=gene-DKM08_RS17695;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=DKM08_RS17695;old_locus_tag=DKM08_17680 NZ_QFYX01000003.1 Protein Homology CDS 125028 129569 . + 0 ID=cds-WP_010950866.1;Parent=gene-DKM08_RS17695;Dbxref=GenBank:WP_010950866.1;Name=WP_010950866.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217813.1;locus_tag=DKM08_RS17695;product=ATP-dependent helicase;protein_id=WP_010950866.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 129573 130340 . + . ID=gene-DKM08_RS17700;Name=nei2;gbkey=Gene;gene=nei2;gene_biotype=protein_coding;locus_tag=DKM08_RS17700;old_locus_tag=DKM08_17685 NZ_QFYX01000003.1 Protein Homology CDS 129573 130340 . + 0 ID=cds-WP_003900006.1;Parent=gene-DKM08_RS17700;Dbxref=GenBank:WP_003900006.1;Name=WP_003900006.1;Ontology_term=GO:0006284,GO:0019104,GO:0140078;gbkey=CDS;gene=nei2;go_function=DNA N-glycosylase activity|0019104||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217814.1;locus_tag=DKM08_RS17700;product=endonuclease VIII Nei2;protein_id=WP_003900006.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 130363 131277 . - . ID=gene-DKM08_RS17705;Name=lpqC;gbkey=Gene;gene=lpqC;gene_biotype=protein_coding;locus_tag=DKM08_RS17705;old_locus_tag=DKM08_17690 NZ_QFYX01000003.1 Protein Homology CDS 130363 131277 . - 0 ID=cds-WP_003417210.1;Parent=gene-DKM08_RS17705;Dbxref=GenBank:WP_003417210.1;Name=WP_003417210.1;Ontology_term=GO:0052689;gbkey=CDS;gene=lpqC;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217815.1;locus_tag=DKM08_RS17705;product=alpha/beta hydrolase family esterase;protein_id=WP_003417210.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 131304 134216 . - . ID=gene-DKM08_RS17710;Name=atsB;gbkey=Gene;gene=atsB;gene_biotype=protein_coding;locus_tag=DKM08_RS17710;old_locus_tag=DKM08_17695 NZ_QFYX01000003.1 Protein Homology CDS 131304 134216 . - 0 ID=cds-WP_010950867.1;Parent=gene-DKM08_RS17710;Dbxref=GenBank:WP_010950867.1;Name=WP_010950867.1;gbkey=CDS;gene=atsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217816.1;locus_tag=DKM08_RS17710;product=arylsulfatase AtsB;protein_id=WP_010950867.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 134236 135153 . - . ID=gene-DKM08_RS17715;Name=DKM08_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17715;old_locus_tag=DKM08_17700 NZ_QFYX01000003.1 Protein Homology CDS 134236 135153 . - 0 ID=cds-WP_023349611.1;Parent=gene-DKM08_RS17715;Dbxref=GenBank:WP_023349611.1;Name=WP_023349611.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217817.1;locus_tag=DKM08_RS17715;product=pseudouridine synthase;protein_id=WP_023349611.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 135165 135830 . - . ID=gene-DKM08_RS17720;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=DKM08_RS17720;old_locus_tag=DKM08_17705 NZ_QFYX01000003.1 Protein Homology CDS 135165 135830 . - 0 ID=cds-WP_003417216.1;Parent=gene-DKM08_RS17720;Dbxref=GenBank:WP_003417216.1;Name=WP_003417216.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217818.1;locus_tag=DKM08_RS17720;product=phosphate signaling complex protein PhoU;protein_id=WP_003417216.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 135938 137695 . - . ID=gene-DKM08_RS17725;Name=DKM08_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17725;old_locus_tag=DKM08_17710 NZ_QFYX01000003.1 Protein Homology CDS 135938 137695 . - 0 ID=cds-WP_003417217.1;Parent=gene-DKM08_RS17725;Dbxref=GenBank:WP_003417217.1;Name=WP_003417217.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217819.1;locus_tag=DKM08_RS17725;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_003417217.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 137710 139191 . - . ID=gene-DKM08_RS17730;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=DKM08_RS17730;old_locus_tag=DKM08_17715;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 137710 139191 . - 0 ID=cds-DKM08_RS17730;Parent=gene-DKM08_RS17730;Note=internal stop;Ontology_term=GO:0045454,GO:0016491,GO:0050660;gbkey=CDS;gene=lpdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217820.1;locus_tag=DKM08_RS17730;product=NAD(P)H-quinone dehydrogenase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 139394 139873 . + . ID=gene-DKM08_RS17735;Name=DKM08_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17735;old_locus_tag=DKM08_17720 NZ_QFYX01000003.1 Protein Homology CDS 139394 139873 . + 0 ID=cds-WP_003417219.1;Parent=gene-DKM08_RS17735;Dbxref=GenBank:WP_003417219.1;Name=WP_003417219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217821.1;locus_tag=DKM08_RS17735;product=gamma-glutamylcyclotransferase;protein_id=WP_003417219.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 139892 141061 . - . ID=gene-DKM08_RS17740;Name=DKM08_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17740;old_locus_tag=DKM08_17725 NZ_QFYX01000003.1 Protein Homology CDS 139892 141061 . - 0 ID=cds-WP_003417220.1;Parent=gene-DKM08_RS17740;Dbxref=GenBank:WP_003417220.1;Name=WP_003417220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177955.1;locus_tag=DKM08_RS17740;product=M20 family metallopeptidase;protein_id=WP_003417220.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 141058 142242 . - . ID=gene-DKM08_RS17745;Name=DKM08_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17745;old_locus_tag=DKM08_17730 NZ_QFYX01000003.1 Protein Homology CDS 141058 142242 . - 0 ID=cds-WP_003900009.1;Parent=gene-DKM08_RS17745;Dbxref=GenBank:WP_003900009.1;Name=WP_003900009.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177956.1;locus_tag=DKM08_RS17745;product=M20 family metallopeptidase;protein_id=WP_003900009.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 142307 143113 . + . ID=gene-DKM08_RS17750;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=DKM08_RS17750;old_locus_tag=DKM08_17735 NZ_QFYX01000003.1 Protein Homology CDS 142307 143113 . + 0 ID=cds-WP_003417233.1;Parent=gene-DKM08_RS17750;Dbxref=GenBank:WP_003417233.1;Name=WP_003417233.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217824.1;locus_tag=DKM08_RS17750;product=purine-nucleoside phosphorylase;protein_id=WP_003417233.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 143117 144721 . + . ID=gene-DKM08_RS17755;Name=pmmB;gbkey=Gene;gene=pmmB;gene_biotype=protein_coding;locus_tag=DKM08_RS17755;old_locus_tag=DKM08_17740 NZ_QFYX01000003.1 Protein Homology CDS 143117 144721 . + 0 ID=cds-WP_003417238.1;Parent=gene-DKM08_RS17755;Dbxref=GenBank:WP_003417238.1;Name=WP_003417238.1;Ontology_term=GO:0016868;gbkey=CDS;gene=pmmB;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217825.1;locus_tag=DKM08_RS17755;product=phospho-sugar mutase;protein_id=WP_003417238.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 144723 145346 . - . ID=gene-DKM08_RS17760;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=DKM08_RS17760;old_locus_tag=DKM08_17745 NZ_QFYX01000003.1 Protein Homology CDS 144723 145346 . - 0 ID=cds-WP_003417245.1;Parent=gene-DKM08_RS17760;Dbxref=GenBank:WP_003417245.1;Name=WP_003417245.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217826.1;locus_tag=DKM08_RS17760;product=uracil phosphoribosyltransferase;protein_id=WP_003417245.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 145451 146350 . + . ID=gene-DKM08_RS17765;Name=sapM;gbkey=Gene;gene=sapM;gene_biotype=protein_coding;locus_tag=DKM08_RS17765;old_locus_tag=DKM08_17750 NZ_QFYX01000003.1 Protein Homology CDS 145451 146350 . + 0 ID=cds-WP_003417249.1;Parent=gene-DKM08_RS17765;Dbxref=GenBank:WP_003417249.1;Name=WP_003417249.1;gbkey=CDS;gene=sapM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217827.1;locus_tag=DKM08_RS17765;product=phosphatidylinositol-3-phosphatase;protein_id=WP_003417249.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 146374 147636 . + . ID=gene-DKM08_RS17770;Name=DKM08_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17770;old_locus_tag=DKM08_17755 NZ_QFYX01000003.1 Protein Homology CDS 146374 147636 . + 0 ID=cds-WP_003417251.1;Parent=gene-DKM08_RS17770;Dbxref=GenBank:WP_003417251.1;Name=WP_003417251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217828.1;locus_tag=DKM08_RS17770;product=hypothetical protein;protein_id=WP_003417251.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 147657 148583 . - . ID=gene-DKM08_RS17775;Name=DKM08_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17775;old_locus_tag=DKM08_17760 NZ_QFYX01000003.1 Protein Homology CDS 147657 148583 . - 0 ID=cds-WP_003417254.1;Parent=gene-DKM08_RS17775;Dbxref=GenBank:WP_003417254.1;Name=WP_003417254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217829.1;locus_tag=DKM08_RS17775;product=alpha/beta fold hydrolase;protein_id=WP_003417254.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 148609 148779 . - . ID=gene-DKM08_RS17780;Name=DKM08_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17780;old_locus_tag=DKM08_17765 NZ_QFYX01000003.1 Protein Homology CDS 148609 148779 . - 0 ID=cds-WP_003900015.1;Parent=gene-DKM08_RS17780;Dbxref=GenBank:WP_003900015.1;Name=WP_003900015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030045.1;locus_tag=DKM08_RS17780;product=hypothetical protein;protein_id=WP_003900015.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 148958 149269 . - . ID=gene-DKM08_RS17785;Name=mtp;gbkey=Gene;gene=mtp;gene_biotype=protein_coding;locus_tag=DKM08_RS17785;old_locus_tag=DKM08_17770 NZ_QFYX01000003.1 Protein Homology CDS 148958 149269 . - 0 ID=cds-WP_003417257.1;Parent=gene-DKM08_RS17785;Dbxref=GenBank:WP_003417257.1;Name=WP_003417257.1;gbkey=CDS;gene=mtp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177957.1;locus_tag=DKM08_RS17785;product=pilin structural subunit Mtp;protein_id=WP_003417257.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 149340 150437 . - . ID=gene-DKM08_RS17790;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=DKM08_RS17790;old_locus_tag=DKM08_17775 NZ_QFYX01000003.1 Protein Homology CDS 149340 150437 . - 0 ID=cds-WP_003417259.1;Parent=gene-DKM08_RS17790;Dbxref=GenBank:WP_003417259.1;Name=WP_003417259.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217830.1;locus_tag=DKM08_RS17790;product=adenosine deaminase;protein_id=WP_003417259.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 150437 151720 . - . ID=gene-DKM08_RS17795;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=DKM08_RS17795;old_locus_tag=DKM08_17780 NZ_QFYX01000003.1 Protein Homology CDS 150437 151720 . - 0 ID=cds-WP_003417262.1;Parent=gene-DKM08_RS17795;Dbxref=GenBank:WP_003417262.1;Name=WP_003417262.1;Ontology_term=GO:0006206;gbkey=CDS;gene=deoA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217831.1;locus_tag=DKM08_RS17795;product=thymidine phosphorylase;protein_id=WP_003417262.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 151717 152118 . - . ID=gene-DKM08_RS17800;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=DKM08_RS17800;old_locus_tag=DKM08_17785 NZ_QFYX01000003.1 Protein Homology CDS 151717 152118 . - 0 ID=cds-WP_003417264.1;Parent=gene-DKM08_RS17800;Dbxref=GenBank:WP_003417264.1;Name=WP_003417264.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217832.1;locus_tag=DKM08_RS17800;product=cytidine deaminase;protein_id=WP_003417264.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 152355 152693 . + . ID=gene-DKM08_RS17805;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=DKM08_RS17805;old_locus_tag=DKM08_17790 NZ_QFYX01000003.1 Protein Homology CDS 152355 152693 . + 0 ID=cds-WP_003417267.1;Parent=gene-DKM08_RS17805;Dbxref=GenBank:WP_003417267.1;Name=WP_003417267.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217833.1;locus_tag=DKM08_RS17805;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_003417267.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 152690 153124 . + . ID=gene-DKM08_RS17810;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=DKM08_RS17810;old_locus_tag=DKM08_17795 NZ_QFYX01000003.1 Protein Homology CDS 152690 153124 . + 0 ID=cds-WP_003417269.1;Parent=gene-DKM08_RS17810;Dbxref=GenBank:WP_003417269.1;Name=WP_003417269.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217834.1;locus_tag=DKM08_RS17810;product=succinate dehydrogenase hydrophobic membrane anchor subunit;protein_id=WP_003417269.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 153253 155025 . + . ID=gene-DKM08_RS17815;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=DKM08_RS17815;old_locus_tag=DKM08_17800 NZ_QFYX01000003.1 Protein Homology CDS 153253 155025 . + 0 ID=cds-WP_003417273.1;Parent=gene-DKM08_RS17815;Dbxref=GenBank:WP_003417273.1;Name=WP_003417273.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217835.1;locus_tag=DKM08_RS17815;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_003417273.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 155025 155816 . + . ID=gene-DKM08_RS17820;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=DKM08_RS17820;old_locus_tag=DKM08_17805 NZ_QFYX01000003.1 Protein Homology CDS 155025 155816 . + 0 ID=cds-WP_010950870.1;Parent=gene-DKM08_RS17820;Dbxref=GenBank:WP_010950870.1;Name=WP_010950870.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;gene=sdhB;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217836.1;locus_tag=DKM08_RS17820;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_010950870.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 155895 156323 . - . ID=gene-DKM08_RS17825;Name=DKM08_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17825;old_locus_tag=DKM08_17810 NZ_QFYX01000003.1 Protein Homology CDS 155895 156323 . - 0 ID=cds-WP_003417282.1;Parent=gene-DKM08_RS17825;Dbxref=GenBank:WP_003417282.1;Name=WP_003417282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217837.1;locus_tag=DKM08_RS17825;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417282.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 156327 156569 . - . ID=gene-DKM08_RS17830;Name=DKM08_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17830;old_locus_tag=DKM08_17815 NZ_QFYX01000003.1 Protein Homology CDS 156327 156569 . - 0 ID=cds-WP_003417286.1;Parent=gene-DKM08_RS17830;Dbxref=GenBank:WP_003417286.1;Name=WP_003417286.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217838.1;locus_tag=DKM08_RS17830;product=CopG family transcriptional regulator;protein_id=WP_003417286.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 156691 157305 . - . ID=gene-DKM08_RS17835;Name=DKM08_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17835;old_locus_tag=DKM08_17820 NZ_QFYX01000003.1 Protein Homology CDS 156691 157305 . - 0 ID=cds-WP_003417288.1;Parent=gene-DKM08_RS17835;Dbxref=GenBank:WP_003417288.1;Name=WP_003417288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177958.1;locus_tag=DKM08_RS17835;product=class I SAM-dependent methyltransferase;protein_id=WP_003417288.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 157302 157967 . - . ID=gene-DKM08_RS17840;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=DKM08_RS17840;old_locus_tag=DKM08_17825 NZ_QFYX01000003.1 Protein Homology CDS 157302 157967 . - 0 ID=cds-WP_003417290.1;Parent=gene-DKM08_RS17840;Dbxref=GenBank:WP_003417290.1;Name=WP_003417290.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177959.1;locus_tag=DKM08_RS17840;product=molybdopterin converting factor subunit 1;protein_id=WP_003417290.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 157968 158501 . - . ID=gene-DKM08_RS17845;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=DKM08_RS17845;old_locus_tag=DKM08_17830 NZ_QFYX01000003.1 Protein Homology CDS 157968 158501 . - 0 ID=cds-WP_003417293.1;Parent=gene-DKM08_RS17845;Dbxref=GenBank:WP_003417293.1;Name=WP_003417293.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217841.3;locus_tag=DKM08_RS17845;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003417293.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 158498 158872 . - . ID=gene-DKM08_RS17850;Name=DKM08_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17850;old_locus_tag=DKM08_17835 NZ_QFYX01000003.1 Protein Homology CDS 158498 158872 . - 0 ID=cds-WP_003417295.1;Parent=gene-DKM08_RS17850;Dbxref=GenBank:WP_003417295.1;Name=WP_003417295.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417295.1;locus_tag=DKM08_RS17850;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003417295.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 158969 160105 . - . ID=gene-DKM08_RS17855;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=DKM08_RS17855;old_locus_tag=DKM08_17840 NZ_QFYX01000003.1 Protein Homology CDS 158969 160105 . - 0 ID=cds-WP_003417297.1;Parent=gene-DKM08_RS17855;Dbxref=GenBank:WP_003417297.1;Name=WP_003417297.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417297.1;locus_tag=DKM08_RS17855;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003417297.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 160678 161823 . + . ID=gene-DKM08_RS17870;Name=DKM08_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17870;old_locus_tag=DKM08_17855 NZ_QFYX01000003.1 Protein Homology CDS 160678 161823 . + 0 ID=cds-WP_003417299.1;Parent=gene-DKM08_RS17870;Dbxref=GenBank:WP_003417299.1;Name=WP_003417299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291369.1;locus_tag=DKM08_RS17870;product=BTAD domain-containing putative transcriptional regulator;protein_id=WP_003417299.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 161918 162355 . - . ID=gene-DKM08_RS17875;Name=DKM08_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17875;old_locus_tag=DKM08_17860 NZ_QFYX01000003.1 Protein Homology CDS 161918 162355 . - 0 ID=cds-WP_003913449.1;Parent=gene-DKM08_RS17875;Dbxref=GenBank:WP_003913449.1;Name=WP_003913449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291370.1;locus_tag=DKM08_RS17875;product=hypothetical protein;protein_id=WP_003913449.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 162729 164441 . + . ID=gene-DKM08_RS17880;Name=DKM08_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17880;old_locus_tag=DKM08_17865 NZ_QFYX01000003.1 Protein Homology CDS 162729 164441 . + 0 ID=cds-WP_003905037.1;Parent=gene-DKM08_RS17880;Dbxref=GenBank:WP_003905037.1;Name=WP_003905037.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=DKM08_RS17880;product=IS110 family transposase;protein_id=WP_003905037.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 164374 165312 . - . ID=gene-DKM08_RS17885;Name=sigJ;gbkey=Gene;gene=sigJ;gene_biotype=protein_coding;locus_tag=DKM08_RS17885;old_locus_tag=DKM08_17870 NZ_QFYX01000003.1 Protein Homology CDS 164374 165312 . - 0 ID=cds-WP_003417413.1;Parent=gene-DKM08_RS17885;Dbxref=GenBank:WP_003417413.1;Name=WP_003417413.1;gbkey=CDS;gene=sigJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217845.1;locus_tag=DKM08_RS17885;product=sigma-70 family RNA polymerase sigma factor SigJ;protein_id=WP_003417413.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 165321 166688 . + . ID=gene-DKM08_RS17890;Name=DKM08_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17890;old_locus_tag=DKM08_17875 NZ_QFYX01000003.1 Protein Homology CDS 165321 166688 . + 0 ID=cds-WP_080670553.1;Parent=gene-DKM08_RS17890;Dbxref=GenBank:WP_080670553.1;Name=WP_080670553.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917150.1;locus_tag=DKM08_RS17890;product=aspartate aminotransferase family protein;protein_id=WP_080670553.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 166757 167974 . + . ID=gene-DKM08_RS17895;Name=dacB1;gbkey=Gene;gene=dacB1;gene_biotype=protein_coding;locus_tag=DKM08_RS17895;old_locus_tag=DKM08_17880 NZ_QFYX01000003.1 Protein Homology CDS 166757 167974 . + 0 ID=cds-WP_003417415.1;Parent=gene-DKM08_RS17895;Dbxref=GenBank:WP_003417415.1;Name=WP_003417415.1;gbkey=CDS;gene=dacB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217847.1;locus_tag=DKM08_RS17895;product=D-alanyl-D-alanine carboxypeptidase DacB1;protein_id=WP_003417415.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 168199 169578 . + . ID=gene-DKM08_RS17900;Name=sugI;gbkey=Gene;gene=sugI;gene_biotype=protein_coding;locus_tag=DKM08_RS17900;old_locus_tag=DKM08_17885 NZ_QFYX01000003.1 Protein Homology CDS 168199 169578 . + 0 ID=cds-WP_003912183.1;Parent=gene-DKM08_RS17900;Dbxref=GenBank:WP_003912183.1;Name=WP_003912183.1;Ontology_term=GO:0008643,GO:0051119,GO:0016020;gbkey=CDS;gene=sugI;go_component=membrane|0016020||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912183.1;locus_tag=DKM08_RS17900;product=sugar porter family MFS transporter;protein_id=WP_003912183.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 169575 170726 . + . ID=gene-DKM08_RS17905;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=DKM08_RS17905;old_locus_tag=DKM08_17890 NZ_QFYX01000003.1 Protein Homology CDS 169575 170726 . + 0 ID=cds-WP_003417418.1;Parent=gene-DKM08_RS17905;Dbxref=GenBank:WP_003417418.1;Name=WP_003417418.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217849.1;locus_tag=DKM08_RS17905;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_003417418.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 170917 171762 . - . ID=gene-DKM08_RS17910;Name=prp1;gbkey=Gene;gene=prp1;gene_biotype=protein_coding;locus_tag=DKM08_RS17910;old_locus_tag=DKM08_17895 NZ_QFYX01000003.1 Protein Homology CDS 170917 171762 . - 0 ID=cds-WP_003417421.1;Parent=gene-DKM08_RS17910;Dbxref=GenBank:WP_003417421.1;Name=WP_003417421.1;gbkey=CDS;gene=prp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217850.1;locus_tag=DKM08_RS17910;product=PDZ-interacting protease regulator Ppr1;protein_id=WP_003417421.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 172237 172677 . + . ID=gene-DKM08_RS17920;Name=DKM08_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17920;old_locus_tag=DKM08_17905 NZ_QFYX01000003.1 Protein Homology CDS 172237 172677 . + 0 ID=cds-WP_003900026.1;Parent=gene-DKM08_RS17920;Dbxref=GenBank:WP_003900026.1;Name=WP_003900026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217851.1;locus_tag=DKM08_RS17920;product=hypoxia response transcriptional regulator;protein_id=WP_003900026.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 172711 173580 . - . ID=gene-DKM08_RS17925;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=DKM08_RS17925;old_locus_tag=DKM08_17910 NZ_QFYX01000003.1 Protein Homology CDS 172711 173580 . - 0 ID=cds-WP_003417435.1;Parent=gene-DKM08_RS17925;Dbxref=GenBank:WP_003417435.1;Name=WP_003417435.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217852.1;locus_tag=DKM08_RS17925;product=inner membrane protein YhjD;protein_id=WP_003417435.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 173601 174611 . - . ID=gene-DKM08_RS17930;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=DKM08_RS17930;old_locus_tag=DKM08_17915 NZ_QFYX01000003.1 Protein Homology CDS 173601 174611 . - 0 ID=cds-WP_003417440.1;Parent=gene-DKM08_RS17930;Dbxref=GenBank:WP_003417440.1;Name=WP_003417440.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217853.1;locus_tag=DKM08_RS17930;product=tryptophan--tRNA ligase;protein_id=WP_003417440.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 174708 175529 . + . ID=gene-DKM08_RS17935;Name=DKM08_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17935;old_locus_tag=DKM08_17920 NZ_QFYX01000003.1 Protein Homology CDS 174708 175529 . + 0 ID=cds-WP_044083113.1;Parent=gene-DKM08_RS17935;Dbxref=GenBank:WP_044083113.1;Name=WP_044083113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019510124.1;locus_tag=DKM08_RS17935;product=alpha/beta fold hydrolase;protein_id=WP_044083113.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 175596 176825 . - . ID=gene-DKM08_RS17940;Name=DKM08_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17940;old_locus_tag=DKM08_17925 NZ_QFYX01000003.1 Protein Homology CDS 175596 176825 . - 0 ID=cds-WP_003417452.1;Parent=gene-DKM08_RS17940;Dbxref=GenBank:WP_003417452.1;Name=WP_003417452.1;Ontology_term=GO:0006102,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=isocitrate metabolic process|0006102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217856.1;locus_tag=DKM08_RS17940;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003417452.1;transl_table=11 NZ_QFYX01000003.1 cmsearch riboswitch 176952 177071 . + . ID=id-NZ_QFYX01000003.1:176952..177071;Dbxref=RFAM:RF00634;Note=SAM riboswitch class IV;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000003.1 RefSeq gene 177108 178457 . + . ID=gene-DKM08_RS17945;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=DKM08_RS17945;old_locus_tag=DKM08_17930 NZ_QFYX01000003.1 Protein Homology CDS 177108 178457 . + 0 ID=cds-WP_003900028.1;Parent=gene-DKM08_RS17945;Dbxref=GenBank:WP_003900028.1;Name=WP_003900028.1;Ontology_term=GO:0019346,GO:0016765;gbkey=CDS;gene=metC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217857.1;locus_tag=DKM08_RS17945;product=bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase;protein_id=WP_003900028.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 178469 179608 . + . ID=gene-DKM08_RS17950;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=DKM08_RS17950;old_locus_tag=DKM08_17935 NZ_QFYX01000003.1 Protein Homology CDS 178469 179608 . + 0 ID=cds-WP_003417458.1;Parent=gene-DKM08_RS17950;Dbxref=GenBank:WP_003417458.1;Name=WP_003417458.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217858.1;locus_tag=DKM08_RS17950;product=homoserine O-acetyltransferase MetX;protein_id=WP_003417458.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 179605 180336 . + . ID=gene-DKM08_RS17955;Name=DKM08_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17955;old_locus_tag=DKM08_17940 NZ_QFYX01000003.1 Protein Homology CDS 179605 180336 . + 0 ID=cds-WP_003417461.1;Parent=gene-DKM08_RS17955;Dbxref=GenBank:WP_003417461.1;Name=WP_003417461.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217859.1;locus_tag=DKM08_RS17955;product=class I SAM-dependent methyltransferase;protein_id=WP_003417461.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 180345 184361 . - . ID=gene-DKM08_RS17960;Name=DKM08_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17960;old_locus_tag=DKM08_17945 NZ_QFYX01000003.1 Protein Homology CDS 180345 184361 . - 0 ID=cds-WP_010950872.1;Parent=gene-DKM08_RS17960;Dbxref=GenBank:WP_010950872.1;Name=WP_010950872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294359.1;locus_tag=DKM08_RS17960;product=PPE family protein;protein_id=WP_010950872.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 184410 185426 . - . ID=gene-DKM08_RS22450;Name=DKM08_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22450 NZ_QFYX01000003.1 GeneMarkS-2+ CDS 184410 185426 . - 0 ID=cds-WP_009938644.1;Parent=gene-DKM08_RS22450;Dbxref=GenBank:WP_009938644.1;Name=WP_009938644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22450;product=hypothetical protein;protein_id=WP_009938644.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 185584 190039 . - . ID=gene-DKM08_RS17965;Name=DKM08_RS17965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS17965;old_locus_tag=DKM08_17950;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 185584 190039 . - 0 ID=cds-DKM08_RS17965;Parent=gene-DKM08_RS17965;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177962.1;locus_tag=DKM08_RS17965;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 190463 190720 . - . ID=gene-DKM08_RS17970;Name=DKM08_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17970;old_locus_tag=DKM08_17955 NZ_QFYX01000003.1 Protein Homology CDS 190463 190720 . - 0 ID=cds-WP_003417619.1;Parent=gene-DKM08_RS17970;Dbxref=GenBank:WP_003417619.1;Name=WP_003417619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217863.1;locus_tag=DKM08_RS17970;product=DUF3017 domain-containing protein;protein_id=WP_003417619.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 190976 200448 . - . ID=gene-DKM08_RS17975;Name=DKM08_RS17975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS17975;old_locus_tag=DKM08_17960;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 190976 200448 . - 0 ID=cds-DKM08_RS17975;Parent=gene-DKM08_RS17975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177963.1;locus_tag=DKM08_RS17975;product=PPE family protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 201028 201519 . + . ID=gene-DKM08_RS17985;Name=DKM08_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS17985;old_locus_tag=DKM08_17970 NZ_QFYX01000003.1 Protein Homology CDS 201028 201519 . + 0 ID=cds-WP_003422266.1-2;Parent=gene-DKM08_RS17985;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.6;locus_tag=DKM08_RS17985;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 201534 201623 . + . ID=gene-DKM08_RS22265;Name=DKM08_RS22265;end_range=201623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22265;old_locus_tag=DKM08_17975;partial=true;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 201534 201623 . + 0 ID=cds-DKM08_RS22265;Parent=gene-DKM08_RS22265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=201623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=DKM08_RS22265;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 202021 202374 . - . ID=gene-DKM08_RS22270;Name=DKM08_RS22270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22270;partial=true;pseudo=true;start_range=.,202021 NZ_QFYX01000003.1 Protein Homology CDS 202021 202374 . - 0 ID=cds-DKM08_RS22270;Parent=gene-DKM08_RS22270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.6;locus_tag=DKM08_RS22270;partial=true;product=transposase;pseudo=true;start_range=.,202021;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 202586 202873 . - . ID=gene-DKM08_RS18000;Name=DKM08_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18000;old_locus_tag=DKM08_17985 NZ_QFYX01000003.1 Protein Homology CDS 202586 202873 . - 0 ID=cds-WP_097370660.1;Parent=gene-DKM08_RS18000;Dbxref=GenBank:WP_097370660.1;Name=WP_097370660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938650.1;locus_tag=DKM08_RS18000;product=transposase;protein_id=WP_097370660.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 203210 214359 . - . ID=gene-DKM08_RS22275;Name=DKM08_RS22275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22275;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 203210 214359 . - 0 ID=cds-DKM08_RS22275;Parent=gene-DKM08_RS22275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177964.1;locus_tag=DKM08_RS22275;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 214603 215292 . - . ID=gene-DKM08_RS22280;Name=DKM08_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22280;old_locus_tag=DKM08_18005 NZ_QFYX01000003.1 Protein Homology CDS 214603 215292 . - 0 ID=cds-WP_003917774.1;Parent=gene-DKM08_RS22280;Dbxref=GenBank:WP_003917774.1;Name=WP_003917774.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF019643.6;locus_tag=DKM08_RS22280;product=BBE domain-containing protein;protein_id=WP_003917774.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 215479 215966 . - . ID=gene-DKM08_RS22285;Name=DKM08_RS22285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22285;old_locus_tag=DKM08_18010;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 215479 215966 . - 0 ID=cds-DKM08_RS22285;Parent=gene-DKM08_RS22285;Note=frameshifted;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.6;locus_tag=DKM08_RS22285;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 215993 216253 . - . ID=gene-DKM08_RS22295;Name=DKM08_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22295;old_locus_tag=DKM08_18020 NZ_QFYX01000003.1 Protein Homology CDS 215993 216253 . - 0 ID=cds-WP_003417741.1;Parent=gene-DKM08_RS22295;Dbxref=GenBank:WP_003417741.1;Name=WP_003417741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217870.2;locus_tag=DKM08_RS22295;product=hypothetical protein;protein_id=WP_003417741.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 216368 216757 . + . ID=gene-DKM08_RS18040;Name=DKM08_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18040;old_locus_tag=DKM08_18025 NZ_QFYX01000003.1 Protein Homology CDS 216368 216757 . + 0 ID=cds-WP_010950876.1;Parent=gene-DKM08_RS18040;Dbxref=GenBank:WP_010950876.1;Name=WP_010950876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217871.1;locus_tag=DKM08_RS18040;product=DUF732 domain-containing protein;protein_id=WP_010950876.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 216771 217064 . - . ID=gene-DKM08_RS18045;Name=DKM08_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18045;old_locus_tag=DKM08_18030 NZ_QFYX01000003.1 Protein Homology CDS 216771 217064 . - 0 ID=cds-WP_003417749.1;Parent=gene-DKM08_RS18045;Dbxref=GenBank:WP_003417749.1;Name=WP_003417749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217872.1;locus_tag=DKM08_RS18045;product=DUF3017 domain-containing protein;protein_id=WP_003417749.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 217061 217906 . - . ID=gene-DKM08_RS18050;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=DKM08_RS18050;old_locus_tag=DKM08_18035 NZ_QFYX01000003.1 Protein Homology CDS 217061 217906 . - 0 ID=cds-WP_010950877.1;Parent=gene-DKM08_RS18050;Dbxref=GenBank:WP_010950877.1;Name=WP_010950877.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354771.1;locus_tag=DKM08_RS18050;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_010950877.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 218030 218305 . + . ID=gene-DKM08_RS18055;Name=relJ;gbkey=Gene;gene=relJ;gene_biotype=protein_coding;locus_tag=DKM08_RS18055;old_locus_tag=DKM08_18040 NZ_QFYX01000003.1 Protein Homology CDS 218030 218305 . + 0 ID=cds-WP_003417757.1;Parent=gene-DKM08_RS18055;Dbxref=GenBank:WP_003417757.1;Name=WP_003417757.1;gbkey=CDS;gene=relJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217874.1;locus_tag=DKM08_RS18055;product=type II toxin-antitoxin system antitoxin RelJ;protein_id=WP_003417757.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 218302 218559 . + . ID=gene-DKM08_RS18060;Name=relK;gbkey=Gene;gene=relK;gene_biotype=protein_coding;locus_tag=DKM08_RS18060;old_locus_tag=DKM08_18045 NZ_QFYX01000003.1 Protein Homology CDS 218302 218559 . + 0 ID=cds-WP_003417760.1;Parent=gene-DKM08_RS18060;Dbxref=GenBank:WP_003417760.1;Name=WP_003417760.1;Ontology_term=GO:0008219;gbkey=CDS;gene=relK;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217875.1;locus_tag=DKM08_RS18060;product=Txe/YoeB family addiction module toxin;protein_id=WP_003417760.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 218601 219791 . + . ID=gene-DKM08_RS18065;Name=DKM08_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18065;old_locus_tag=DKM08_18050 NZ_QFYX01000003.1 Protein Homology CDS 218601 219791 . + 0 ID=cds-WP_003900033.1;Parent=gene-DKM08_RS18065;Dbxref=GenBank:WP_003900033.1;Name=WP_003900033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217876.1;locus_tag=DKM08_RS18065;product=NADH:flavin oxidoreductase;protein_id=WP_003900033.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 219908 220276 . + . ID=gene-DKM08_RS18070;Name=DKM08_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18070;old_locus_tag=DKM08_18055 NZ_QFYX01000003.1 Protein Homology CDS 219908 220276 . + 0 ID=cds-WP_003417765.1;Parent=gene-DKM08_RS18070;Dbxref=GenBank:WP_003417765.1;Name=WP_003417765.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217877.1;locus_tag=DKM08_RS18070;product=FHA domain-containing protein;protein_id=WP_003417765.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 220273 220824 . - . ID=gene-DKM08_RS18075;Name=mfpA;gbkey=Gene;gene=mfpA;gene_biotype=protein_coding;locus_tag=DKM08_RS18075;old_locus_tag=DKM08_18060 NZ_QFYX01000003.1 Protein Homology CDS 220273 220824 . - 0 ID=cds-WP_003417767.1;Parent=gene-DKM08_RS18075;Dbxref=GenBank:WP_003417767.1;Name=WP_003417767.1;gbkey=CDS;gene=mfpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217878.1;locus_tag=DKM08_RS18075;product=pentapeptide repeat protein MfpA;protein_id=WP_003417767.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 220831 221412 . - . ID=gene-DKM08_RS18080;Name=DKM08_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18080;old_locus_tag=DKM08_18065 NZ_QFYX01000003.1 Protein Homology CDS 220831 221412 . - 0 ID=cds-WP_003417769.1;Parent=gene-DKM08_RS18080;Dbxref=GenBank:WP_003417769.1;Name=WP_003417769.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217879.1;locus_tag=DKM08_RS18080;product=GTP-binding protein;protein_id=WP_003417769.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 221393 221761 . - . ID=gene-DKM08_RS18085;Name=DKM08_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18085;old_locus_tag=DKM08_18070 NZ_QFYX01000003.1 Protein Homology CDS 221393 221761 . - 0 ID=cds-WP_003417772.1;Parent=gene-DKM08_RS18085;Dbxref=GenBank:WP_003417772.1;Name=WP_003417772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217880.1;locus_tag=DKM08_RS18085;product=DUF742 domain-containing protein;protein_id=WP_003417772.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 221739 222131 . - . ID=gene-DKM08_RS18090;Name=DKM08_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18090;old_locus_tag=DKM08_18075 NZ_QFYX01000003.1 Protein Homology CDS 221739 222131 . - 0 ID=cds-WP_003417776.1;Parent=gene-DKM08_RS18090;Dbxref=GenBank:WP_003417776.1;Name=WP_003417776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217881.1;locus_tag=DKM08_RS18090;product=serine protease inhibitor;protein_id=WP_003417776.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 222128 224758 . - . ID=gene-DKM08_RS18095;Name=DKM08_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18095;old_locus_tag=DKM08_18080 NZ_QFYX01000003.1 Protein Homology CDS 222128 224758 . - 0 ID=cds-WP_003900676.1;Parent=gene-DKM08_RS18095;Dbxref=GenBank:WP_003900676.1;Name=WP_003900676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217882.1;locus_tag=DKM08_RS18095;product=sensor histidine kinase;protein_id=WP_003900676.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 224994 225458 . + . ID=gene-DKM08_RS18100;Name=spoU;gbkey=Gene;gene=spoU;gene_biotype=protein_coding;locus_tag=DKM08_RS18100;old_locus_tag=DKM08_18085 NZ_QFYX01000003.1 Protein Homology CDS 224994 225458 . + 0 ID=cds-WP_003417878.1;Parent=gene-DKM08_RS18100;Dbxref=GenBank:WP_003417878.1;Name=WP_003417878.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;gene=spoU;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217883.1;locus_tag=DKM08_RS18100;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_003417878.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 225825 227600 . + . ID=gene-DKM08_RS18110;Name=DKM08_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18110;old_locus_tag=DKM08_18090 NZ_QFYX01000003.1 Protein Homology CDS 225825 227600 . + 0 ID=cds-WP_011799345.1;Parent=gene-DKM08_RS18110;Dbxref=GenBank:WP_011799345.1;Name=WP_011799345.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177965.1;locus_tag=DKM08_RS18110;product=PE family protein;protein_id=WP_011799345.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 227601 228245 . - . ID=gene-DKM08_RS18115;Name=DKM08_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18115;old_locus_tag=DKM08_18095 NZ_QFYX01000003.1 Protein Homology CDS 227601 228245 . - 0 ID=cds-WP_003417881.1;Parent=gene-DKM08_RS18115;Dbxref=GenBank:WP_003417881.1;Name=WP_003417881.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217885.1;locus_tag=DKM08_RS18115;product=nitroreductase family protein;protein_id=WP_003417881.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 228268 228678 . + . ID=gene-DKM08_RS18120;Name=DKM08_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18120;old_locus_tag=DKM08_18100 NZ_QFYX01000003.1 Protein Homology CDS 228268 228678 . + 0 ID=cds-WP_003912209.1;Parent=gene-DKM08_RS18120;Dbxref=GenBank:WP_003912209.1;Name=WP_003912209.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912209.1;locus_tag=DKM08_RS18120;product=TIGR03667 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003912209.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 228767 232042 . - . ID=gene-DKM08_RS18125;Name=dnaE2;gbkey=Gene;gene=dnaE2;gene_biotype=protein_coding;locus_tag=DKM08_RS18125;old_locus_tag=DKM08_18105 NZ_QFYX01000003.1 Protein Homology CDS 228767 232042 . - 0 ID=cds-WP_003417885.1;Parent=gene-DKM08_RS18125;Dbxref=GenBank:WP_003417885.1;Name=WP_003417885.1;gbkey=CDS;gene=dnaE2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417885.1;locus_tag=DKM08_RS18125;product=error-prone DNA polymerase DnaE2;protein_id=WP_003417885.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 232198 233538 . + . ID=gene-DKM08_RS18130;Name=DKM08_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18130;old_locus_tag=DKM08_18110 NZ_QFYX01000003.1 Protein Homology CDS 232198 233538 . + 0 ID=cds-WP_003417889.1;Parent=gene-DKM08_RS18130;Dbxref=GenBank:WP_003417889.1;Name=WP_003417889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217888.1;locus_tag=DKM08_RS18130;product=diacyglycerol O-acyltransferase;protein_id=WP_003417889.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 233580 234755 . + . ID=gene-DKM08_RS18135;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=DKM08_RS18135;old_locus_tag=DKM08_18115 NZ_QFYX01000003.1 Protein Homology CDS 233580 234755 . + 0 ID=cds-WP_023349615.1;Parent=gene-DKM08_RS18135;Dbxref=GenBank:WP_023349615.1;Name=WP_023349615.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217889.1;locus_tag=DKM08_RS18135;product=trehalose-phosphatase;protein_id=WP_023349615.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 234809 234898 . + . ID=gene-DKM08_RS18140;Name=DKM08_RS18140;end_range=234898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18140;old_locus_tag=DKM08_18120;partial=true;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 234809 234898 . + 0 ID=cds-DKM08_RS18140;Parent=gene-DKM08_RS18140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=234898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=DKM08_RS18140;partial=true;product=PE domain-containing protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 235073 235882 . + . ID=gene-DKM08_RS18145;Name=DKM08_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18145;old_locus_tag=DKM08_18125 NZ_QFYX01000003.1 Protein Homology CDS 235073 235882 . + 0 ID=cds-WP_196774961.1;Parent=gene-DKM08_RS18145;Dbxref=GenBank:WP_196774961.1;Name=WP_196774961.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF012596.6;locus_tag=DKM08_RS18145;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_196774961.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 235887 237314 . + . ID=gene-DKM08_RS18150;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=DKM08_RS18150;old_locus_tag=DKM08_18130 NZ_QFYX01000003.1 Protein Homology CDS 235887 237314 . + 0 ID=cds-WP_023349616.1;Parent=gene-DKM08_RS18150;Dbxref=GenBank:WP_023349616.1;Name=WP_023349616.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217892.1;locus_tag=DKM08_RS18150;product=amidase;protein_id=WP_023349616.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 237422 238075 . + . ID=gene-DKM08_RS18155;Name=DKM08_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18155;old_locus_tag=DKM08_18135 NZ_QFYX01000003.1 Protein Homology CDS 237422 238075 . + 0 ID=cds-WP_003417903.1;Parent=gene-DKM08_RS18155;Dbxref=GenBank:WP_003417903.1;Name=WP_003417903.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217893.1;locus_tag=DKM08_RS18155;product=HAD family hydrolase;protein_id=WP_003417903.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 238114 239618 . - . ID=gene-DKM08_RS18160;Name=DKM08_RS18160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18160;old_locus_tag=DKM08_18140;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 238114 239618 . - 0 ID=cds-DKM08_RS18160;Parent=gene-DKM08_RS18160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217894.1;locus_tag=DKM08_RS18160;product=type B diterpene cyclase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 239623 240513 . - . ID=gene-DKM08_RS18165;Name=DKM08_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18165;old_locus_tag=DKM08_18145 NZ_QFYX01000003.1 Protein Homology CDS 239623 240513 . - 0 ID=cds-WP_003417908.1;Parent=gene-DKM08_RS18165;Dbxref=GenBank:WP_003417908.1;Name=WP_003417908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217895.1;locus_tag=DKM08_RS18165;product=diterpene synthase;protein_id=WP_003417908.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 240522 242327 . - . ID=gene-DKM08_RS18170;Name=DKM08_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18170;old_locus_tag=DKM08_18150 NZ_QFYX01000003.1 Protein Homology CDS 240522 242327 . - 0 ID=cds-WP_010950880.1;Parent=gene-DKM08_RS18170;Dbxref=GenBank:WP_010950880.1;Name=WP_010950880.1;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950880.1;locus_tag=DKM08_RS18170;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_010950880.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 242357 243346 . - . ID=gene-DKM08_RS18175;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=DKM08_RS18175;old_locus_tag=DKM08_18155 NZ_QFYX01000003.1 Protein Homology CDS 242357 243346 . - 0 ID=cds-WP_003417912.1;Parent=gene-DKM08_RS18175;Dbxref=GenBank:WP_003417912.1;Name=WP_003417912.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177967.1;locus_tag=DKM08_RS18175;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003417912.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 243346 244398 . - . ID=gene-DKM08_RS18180;Name=idsB;gbkey=Gene;gene=idsB;gene_biotype=protein_coding;locus_tag=DKM08_RS18180;old_locus_tag=DKM08_18160 NZ_QFYX01000003.1 Protein Homology CDS 243346 244398 . - 0 ID=cds-WP_003900678.1;Parent=gene-DKM08_RS18180;Dbxref=GenBank:WP_003900678.1;Name=WP_003900678.1;Ontology_term=GO:0008299,GO:0033386,GO:0004311,GO:0004659;gbkey=CDS;gene=idsB;go_function=geranylgeranyl diphosphate synthase activity|0004311||IEA,prenyltransferase activity|0004659||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,geranylgeranyl diphosphate biosynthetic process|0033386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217900.1;locus_tag=DKM08_RS18180;product=geranylgeranyl diphosphate synthase IdsB;protein_id=WP_003900678.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 245152 245544 . - . ID=gene-DKM08_RS18185;Name=DKM08_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18185;old_locus_tag=DKM08_18165 NZ_QFYX01000003.1 Protein Homology CDS 245152 245544 . - 0 ID=cds-WP_003417916.1;Parent=gene-DKM08_RS18185;Dbxref=GenBank:WP_003417916.1;Name=WP_003417916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217901.1;locus_tag=DKM08_RS18185;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417916.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 245544 245819 . - . ID=gene-DKM08_RS18190;Name=DKM08_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18190;old_locus_tag=DKM08_18170 NZ_QFYX01000003.1 Protein Homology CDS 245544 245819 . - 0 ID=cds-WP_003912214.1;Parent=gene-DKM08_RS18190;Dbxref=GenBank:WP_003912214.1;Name=WP_003912214.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912214.1;locus_tag=DKM08_RS18190;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003912214.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 246001 247372 . + . ID=gene-DKM08_RS18195;Name=DKM08_RS18195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18195;old_locus_tag=DKM08_18175;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 246001 247372 . + 0 ID=cds-DKM08_RS18195;Parent=gene-DKM08_RS18195;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=DKM08_RS18195;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 247562 249811 . + . ID=gene-DKM08_RS18200;Name=DKM08_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18200;old_locus_tag=DKM08_18180 NZ_QFYX01000003.1 Protein Homology CDS 247562 249811 . + 0 ID=cds-WP_010950881.1;Parent=gene-DKM08_RS18200;Dbxref=GenBank:WP_010950881.1;Name=WP_010950881.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799349.1;locus_tag=DKM08_RS18200;product=PE family protein;protein_id=WP_010950881.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 249882 250754 . - . ID=gene-DKM08_RS18205;Name=htdY;gbkey=Gene;gene=htdY;gene_biotype=protein_coding;locus_tag=DKM08_RS18205;old_locus_tag=DKM08_18185 NZ_QFYX01000003.1 Protein Homology CDS 249882 250754 . - 0 ID=cds-WP_010950882.1;Parent=gene-DKM08_RS18205;Dbxref=GenBank:WP_010950882.1;Name=WP_010950882.1;gbkey=CDS;gene=htdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217906.1;locus_tag=DKM08_RS18205;product=3-hydroxyacyl-thioester dehydratase HtdY;protein_id=WP_010950882.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 250828 251538 . + . ID=gene-DKM08_RS18210;Name=lpqD;gbkey=Gene;gene=lpqD;gene_biotype=protein_coding;locus_tag=DKM08_RS18210;old_locus_tag=DKM08_18190 NZ_QFYX01000003.1 Protein Homology CDS 250828 251538 . + 0 ID=cds-WP_003417932.1;Parent=gene-DKM08_RS18210;Dbxref=GenBank:WP_003417932.1;Name=WP_003417932.1;Ontology_term=GO:0016791;gbkey=CDS;gene=lpqD;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217907.1;locus_tag=DKM08_RS18210;product=histidine phosphatase family protein;protein_id=WP_003417932.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 251584 253536 . + . ID=gene-DKM08_RS18215;Name=DKM08_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18215;old_locus_tag=DKM08_18195 NZ_QFYX01000003.1 Protein Homology CDS 251584 253536 . + 0 ID=cds-WP_003417940.1;Parent=gene-DKM08_RS18215;Dbxref=GenBank:WP_003417940.1;Name=WP_003417940.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217908.1;locus_tag=DKM08_RS18215;product=SDR family oxidoreductase;protein_id=WP_003417940.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 253537 254400 . - . ID=gene-DKM08_RS18220;Name=cmaA1;gbkey=Gene;gene=cmaA1;gene_biotype=protein_coding;locus_tag=DKM08_RS18220;old_locus_tag=DKM08_18200 NZ_QFYX01000003.1 Protein Homology CDS 253537 254400 . - 0 ID=cds-WP_003417944.1;Parent=gene-DKM08_RS18220;Dbxref=GenBank:WP_003417944.1;Name=WP_003417944.1;gbkey=CDS;gene=cmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217909.1;locus_tag=DKM08_RS18220;product=cyclopropane mycolic acid synthase CmaA1;protein_id=WP_003417944.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 254424 255350 . + . ID=gene-DKM08_RS18225;Name=iunH;gbkey=Gene;gene=iunH;gene_biotype=protein_coding;locus_tag=DKM08_RS18225;old_locus_tag=DKM08_18205 NZ_QFYX01000003.1 Protein Homology CDS 254424 255350 . + 0 ID=cds-WP_003417946.1;Parent=gene-DKM08_RS18225;Dbxref=GenBank:WP_003417946.1;Name=WP_003417946.1;gbkey=CDS;gene=iunH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217910.1;locus_tag=DKM08_RS18225;product=nucleoside hydrolase IunH;protein_id=WP_003417946.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 255405 256988 . - . ID=gene-DKM08_RS18230;Name=DKM08_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18230;old_locus_tag=DKM08_18210 NZ_QFYX01000003.1 Protein Homology CDS 255405 256988 . - 0 ID=cds-WP_003900042.1;Parent=gene-DKM08_RS18230;Dbxref=GenBank:WP_003900042.1;Name=WP_003900042.1;Ontology_term=GO:0006261,GO:0000287,GO:0003684,GO:0003887;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217911.1;locus_tag=DKM08_RS18230;product=DNA polymerase Y family protein;protein_id=WP_003900042.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 256985 257599 . - . ID=gene-DKM08_RS18235;Name=DKM08_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18235;old_locus_tag=DKM08_18215 NZ_QFYX01000003.1 Protein Homology CDS 256985 257599 . - 0 ID=cds-WP_003910772.1;Parent=gene-DKM08_RS18235;Dbxref=GenBank:WP_003910772.1;Name=WP_003910772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217912.2;locus_tag=DKM08_RS18235;product=hypothetical protein;protein_id=WP_003910772.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 257598 258308 . + . ID=gene-DKM08_RS18240;Name=DKM08_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18240;old_locus_tag=DKM08_18220 NZ_QFYX01000003.1 Protein Homology CDS 257598 258308 . + 0 ID=cds-WP_003900680.1;Parent=gene-DKM08_RS18240;Dbxref=GenBank:WP_003900680.1;Name=WP_003900680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487565.1;locus_tag=DKM08_RS18240;product=hypothetical protein;protein_id=WP_003900680.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 258464 260041 . - . ID=gene-DKM08_RS18245;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=DKM08_RS18245;old_locus_tag=DKM08_18225 NZ_QFYX01000003.1 Protein Homology CDS 258464 260041 . - 0 ID=cds-WP_003417952.1;Parent=gene-DKM08_RS18245;Dbxref=GenBank:WP_003417952.1;Name=WP_003417952.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217913.1;locus_tag=DKM08_RS18245;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_003417952.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 260053 260961 . - . ID=gene-DKM08_RS18250;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=DKM08_RS18250;old_locus_tag=DKM08_18230 NZ_QFYX01000003.1 Protein Homology CDS 260053 260961 . - 0 ID=cds-WP_003417954.1;Parent=gene-DKM08_RS18250;Dbxref=GenBank:WP_003417954.1;Name=WP_003417954.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217914.1;locus_tag=DKM08_RS18250;product=presqualene diphosphate synthase HpnD;protein_id=WP_003417954.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 260990 262069 . - . ID=gene-DKM08_RS18255;Name=idsA1;gbkey=Gene;gene=idsA1;gene_biotype=protein_coding;locus_tag=DKM08_RS18255;old_locus_tag=DKM08_18235 NZ_QFYX01000003.1 Protein Homology CDS 260990 262069 . - 0 ID=cds-WP_003417957.1;Parent=gene-DKM08_RS18255;Dbxref=GenBank:WP_003417957.1;Name=WP_003417957.1;gbkey=CDS;gene=idsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177970.1;locus_tag=DKM08_RS18255;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003417957.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 262218 263138 . + . ID=gene-DKM08_RS18260;Name=DKM08_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18260;old_locus_tag=DKM08_18240 NZ_QFYX01000003.1 Protein Homology CDS 262218 263138 . + 0 ID=cds-WP_003912218.1;Parent=gene-DKM08_RS18260;Dbxref=GenBank:WP_003912218.1;Name=WP_003912218.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936179.1;locus_tag=DKM08_RS18260;product=class I SAM-dependent methyltransferase;protein_id=WP_003912218.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 263202 263990 . + . ID=gene-DKM08_RS18265;Name=DKM08_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18265;old_locus_tag=DKM08_18245 NZ_QFYX01000003.1 Protein Homology CDS 263202 263990 . + 0 ID=cds-WP_003417961.1;Parent=gene-DKM08_RS18265;Dbxref=GenBank:WP_003417961.1;Name=WP_003417961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217917.1;locus_tag=DKM08_RS18265;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_003417961.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 264005 266365 . + . ID=gene-DKM08_RS18270;Name=DKM08_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18270;old_locus_tag=DKM08_18250 NZ_QFYX01000003.1 Protein Homology CDS 264005 266365 . + 0 ID=cds-WP_003900047.1;Parent=gene-DKM08_RS18270;Dbxref=GenBank:WP_003900047.1;Name=WP_003900047.1;Ontology_term=GO:0005975,GO:0016787,GO:0030246;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217918.1;locus_tag=DKM08_RS18270;product=glycoside hydrolase family 65 protein;protein_id=WP_003900047.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 266641 267030 . - . ID=gene-DKM08_RS22300;Name=DKM08_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22300 NZ_QFYX01000003.1 GeneMarkS-2+ CDS 266641 267030 . - 0 ID=cds-WP_173427081.1;Parent=gene-DKM08_RS22300;Dbxref=GenBank:WP_173427081.1;Name=WP_173427081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS22300;product=hypothetical protein;protein_id=WP_173427081.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 267023 268261 . - . ID=gene-DKM08_RS18285;Name=DKM08_RS18285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18285;old_locus_tag=DKM08_18265;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 267023 268261 . - 0 ID=cds-DKM08_RS18285;Parent=gene-DKM08_RS18285;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=DKM08_RS18285;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 268632 270233 . - . ID=gene-DKM08_RS18290;Name=DKM08_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18290;old_locus_tag=DKM08_18270 NZ_QFYX01000003.1 Protein Homology CDS 268632 270233 . - 0 ID=cds-WP_003417969.1;Parent=gene-DKM08_RS18290;Dbxref=GenBank:WP_003417969.1;Name=WP_003417969.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217920.1;locus_tag=DKM08_RS18290;product=FAD/NAD(P)-binding protein;protein_id=WP_003417969.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 270250 270954 . - . ID=gene-DKM08_RS18295;Name=DKM08_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18295;old_locus_tag=DKM08_18275 NZ_QFYX01000003.1 Protein Homology CDS 270250 270954 . - 0 ID=cds-WP_003417980.1;Parent=gene-DKM08_RS18295;Dbxref=GenBank:WP_003417980.1;Name=WP_003417980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217921.1;locus_tag=DKM08_RS18295;product=dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase;protein_id=WP_003417980.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 271072 271638 . - . ID=gene-DKM08_RS18300;Name=DKM08_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18300;old_locus_tag=DKM08_18280 NZ_QFYX01000003.1 Protein Homology CDS 271072 271638 . - 0 ID=cds-WP_003417984.1;Parent=gene-DKM08_RS18300;Dbxref=GenBank:WP_003417984.1;Name=WP_003417984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217922.1;locus_tag=DKM08_RS18300;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417984.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 271700 272587 . + . ID=gene-DKM08_RS18305;Name=DKM08_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18305;old_locus_tag=DKM08_18285 NZ_QFYX01000003.1 Protein Homology CDS 271700 272587 . + 0 ID=cds-WP_003900050.1;Parent=gene-DKM08_RS18305;Dbxref=GenBank:WP_003900050.1;Name=WP_003900050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217923.1;locus_tag=DKM08_RS18305;product=alpha-ketoglutarate-dependent sulfate ester dioxygenase;protein_id=WP_003900050.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 272643 272921 . + . ID=gene-DKM08_RS18310;Name=DKM08_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18310;old_locus_tag=DKM08_18290 NZ_QFYX01000003.1 Protein Homology CDS 272643 272921 . + 0 ID=cds-WP_003912220.1;Parent=gene-DKM08_RS18310;Dbxref=GenBank:WP_003912220.1;Name=WP_003912220.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912220.1;locus_tag=DKM08_RS18310;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003912220.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 272918 273328 . + . ID=gene-DKM08_RS18315;Name=DKM08_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18315;old_locus_tag=DKM08_18295 NZ_QFYX01000003.1 Protein Homology CDS 272918 273328 . + 0 ID=cds-WP_003417998.1;Parent=gene-DKM08_RS18315;Dbxref=GenBank:WP_003417998.1;Name=WP_003417998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217925.1;locus_tag=DKM08_RS18315;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417998.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 273361 275097 . - . ID=gene-DKM08_RS18320;Name=choD;gbkey=Gene;gene=choD;gene_biotype=protein_coding;locus_tag=DKM08_RS18320;old_locus_tag=DKM08_18300 NZ_QFYX01000003.1 Protein Homology CDS 273361 275097 . - 0 ID=cds-WP_003418002.1;Parent=gene-DKM08_RS18320;Dbxref=GenBank:WP_003418002.1;Name=WP_003418002.1;gbkey=CDS;gene=choD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217926.1;locus_tag=DKM08_RS18320;product=cholesterol oxidase;protein_id=WP_003418002.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 275153 276280 . - . ID=gene-DKM08_RS18325;Name=DKM08_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18325;old_locus_tag=DKM08_18305 NZ_QFYX01000003.1 Protein Homology CDS 275153 276280 . - 0 ID=cds-WP_003418005.1;Parent=gene-DKM08_RS18325;Dbxref=GenBank:WP_003418005.1;Name=WP_003418005.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217927.1;locus_tag=DKM08_RS18325;product=GuaB3 family IMP dehydrogenase-related protein;protein_id=WP_003418005.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 276300 277889 . - . ID=gene-DKM08_RS18330;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=DKM08_RS18330;old_locus_tag=DKM08_18310 NZ_QFYX01000003.1 Protein Homology CDS 276300 277889 . - 0 ID=cds-WP_003900682.1;Parent=gene-DKM08_RS18330;Dbxref=GenBank:WP_003900682.1;Name=WP_003900682.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217928.1;locus_tag=DKM08_RS18330;product=IMP dehydrogenase;protein_id=WP_003900682.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 278096 278506 . + . ID=gene-DKM08_RS18335;Name=DKM08_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18335;old_locus_tag=DKM08_18315 NZ_QFYX01000003.1 Protein Homology CDS 278096 278506 . + 0 ID=cds-WP_003418008.1;Parent=gene-DKM08_RS18335;Dbxref=GenBank:WP_003418008.1;Name=WP_003418008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217929.1;locus_tag=DKM08_RS18335;product=DUF5319 domain-containing protein;protein_id=WP_003418008.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 278516 279415 . - . ID=gene-DKM08_RS18340;Name=rsdA;gbkey=Gene;gene=rsdA;gene_biotype=protein_coding;locus_tag=DKM08_RS18340;old_locus_tag=DKM08_18320 NZ_QFYX01000003.1 Protein Homology CDS 278516 279415 . - 0 ID=cds-WP_003418011.1;Parent=gene-DKM08_RS18340;Dbxref=GenBank:WP_003418011.1;Name=WP_003418011.1;gbkey=CDS;gene=rsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217930.1;locus_tag=DKM08_RS18340;product=anti-sigma D factor RsdA;protein_id=WP_003418011.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 279408 279983 . - . ID=gene-DKM08_RS18345;Name=sigD;gbkey=Gene;gene=sigD;gene_biotype=protein_coding;locus_tag=DKM08_RS18345;old_locus_tag=DKM08_18325 NZ_QFYX01000003.1 Protein Homology CDS 279408 279983 . - 0 ID=cds-WP_003917787.1;Parent=gene-DKM08_RS18345;Dbxref=GenBank:WP_003917787.1;Name=WP_003917787.1;gbkey=CDS;gene=sigD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917787.1;locus_tag=DKM08_RS18345;product=ECF RNA polymerase sigma factor SigD;protein_id=WP_003917787.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 280064 280891 . - . ID=gene-DKM08_RS18350;Name=DKM08_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18350;old_locus_tag=DKM08_18330 NZ_QFYX01000003.1 Protein Homology CDS 280064 280891 . - 0 ID=cds-WP_003900051.1;Parent=gene-DKM08_RS18350;Dbxref=GenBank:WP_003900051.1;Name=WP_003900051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217932.1;locus_tag=DKM08_RS18350;product=hypothetical protein;protein_id=WP_003900051.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 281262 281570 . + . ID=gene-DKM08_RS18355;Name=whiB3;gbkey=Gene;gene=whiB3;gene_biotype=protein_coding;locus_tag=DKM08_RS18355;old_locus_tag=DKM08_18335 NZ_QFYX01000003.1 Protein Homology CDS 281262 281570 . + 0 ID=cds-WP_003418017.1;Parent=gene-DKM08_RS18355;Dbxref=GenBank:WP_003418017.1;Name=WP_003418017.1;gbkey=CDS;gene=whiB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217933.1;locus_tag=DKM08_RS18355;product=redox-responsive transcriptional regulator WhiB3;protein_id=WP_003418017.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 281642 283261 . - . ID=gene-DKM08_RS18360;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=DKM08_RS18360;old_locus_tag=DKM08_18340 NZ_QFYX01000003.1 Protein Homology CDS 281642 283261 . - 0 ID=cds-WP_003418021.1;Parent=gene-DKM08_RS18360;Dbxref=GenBank:WP_003418021.1;Name=WP_003418021.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217934.1;locus_tag=DKM08_RS18360;product=chaperonin GroEL;protein_id=WP_003418021.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 283356 283658 . - . ID=gene-DKM08_RS18365;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=DKM08_RS18365;old_locus_tag=DKM08_18345 NZ_QFYX01000003.1 Protein Homology CDS 283356 283658 . - 0 ID=cds-WP_003418028.1;Parent=gene-DKM08_RS18365;Dbxref=GenBank:WP_003418028.1;Name=WP_003418028.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003929249.1;locus_tag=DKM08_RS18365;product=co-chaperone GroES;protein_id=WP_003418028.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 283925 284959 . - . ID=gene-DKM08_RS18370;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=DKM08_RS18370;old_locus_tag=DKM08_18350 NZ_QFYX01000003.1 Protein Homology CDS 283925 284959 . - 0 ID=cds-WP_003900052.1;Parent=gene-DKM08_RS18370;Dbxref=GenBank:WP_003900052.1;Name=WP_003900052.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217936.1;locus_tag=DKM08_RS18370;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_003900052.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 284956 285432 . - . ID=gene-DKM08_RS18375;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=DKM08_RS18375;old_locus_tag=DKM08_18355 NZ_QFYX01000003.1 Protein Homology CDS 284956 285432 . - 0 ID=cds-WP_003418034.1;Parent=gene-DKM08_RS18375;Dbxref=GenBank:WP_003418034.1;Name=WP_003418034.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217937.1;locus_tag=DKM08_RS18375;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_003418034.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 285429 286064 . - . ID=gene-DKM08_RS18380;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=DKM08_RS18380;old_locus_tag=DKM08_18360 NZ_QFYX01000003.1 Protein Homology CDS 285429 286064 . - 0 ID=cds-WP_003418038.1;Parent=gene-DKM08_RS18380;Dbxref=GenBank:WP_003418038.1;Name=WP_003418038.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217938.1;locus_tag=DKM08_RS18380;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_003418038.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 286061 286567 . - . ID=gene-DKM08_RS18385;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=DKM08_RS18385;old_locus_tag=DKM08_18365 NZ_QFYX01000003.1 Protein Homology CDS 286061 286567 . - 0 ID=cds-WP_003418042.1;Parent=gene-DKM08_RS18385;Dbxref=GenBank:WP_003418042.1;Name=WP_003418042.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217939.1;locus_tag=DKM08_RS18385;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_003418042.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 286564 287724 . - . ID=gene-DKM08_RS18390;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=DKM08_RS18390;old_locus_tag=DKM08_18370 NZ_QFYX01000003.1 Protein Homology CDS 286564 287724 . - 0 ID=cds-WP_023637501.1;Parent=gene-DKM08_RS18390;Dbxref=GenBank:WP_023637501.1;Name=WP_023637501.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303874.1;locus_tag=DKM08_RS18390;product=alanine racemase;protein_id=WP_023637501.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 287750 287980 . + . ID=gene-DKM08_RS18395;Name=DKM08_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18395;old_locus_tag=DKM08_18375 NZ_QFYX01000003.1 Protein Homology CDS 287750 287980 . + 0 ID=cds-WP_003900685.1;Parent=gene-DKM08_RS18395;Dbxref=GenBank:WP_003900685.1;Name=WP_003900685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900685.1;locus_tag=DKM08_RS18395;product=histone acetyltransferase;protein_id=WP_003900685.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 288084 288446 . - . ID=gene-DKM08_RS18400;Name=DKM08_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18400;old_locus_tag=DKM08_18380 NZ_QFYX01000003.1 Protein Homology CDS 288084 288446 . - 0 ID=cds-WP_003904310.1;Parent=gene-DKM08_RS18400;Dbxref=GenBank:WP_003904310.1;Name=WP_003904310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=DKM08_RS18400;product=hypothetical protein;protein_id=WP_003904310.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 288609 289145 . + . ID=gene-DKM08_RS18405;Name=DKM08_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18405;old_locus_tag=DKM08_18385 NZ_QFYX01000003.1 Protein Homology CDS 288609 289145 . + 0 ID=cds-WP_010950885.1;Parent=gene-DKM08_RS18405;Dbxref=GenBank:WP_010950885.1;Name=WP_010950885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177973.1;locus_tag=DKM08_RS18405;product=PPE family protein;protein_id=WP_010950885.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 289202 290249 . - . ID=gene-DKM08_RS18410;Name=DKM08_RS18410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18410;old_locus_tag=DKM08_18390;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 289202 290249 . - 0 ID=cds-DKM08_RS18410;Parent=gene-DKM08_RS18410;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558364.1;locus_tag=DKM08_RS18410;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 290288 290443 . - . ID=gene-DKM08_RS18415;Name=DKM08_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18415;old_locus_tag=DKM08_18395 NZ_QFYX01000003.1 Protein Homology CDS 290288 290443 . - 0 ID=cds-WP_003418266.1;Parent=gene-DKM08_RS18415;Dbxref=GenBank:WP_003418266.1;Name=WP_003418266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030046.1;locus_tag=DKM08_RS18415;product=hypothetical protein;protein_id=WP_003418266.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 290468 290623 . - . ID=gene-DKM08_RS21755;Name=DKM08_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21755 NZ_QFYX01000003.1 GeneMarkS-2+ CDS 290468 290623 . - 0 ID=cds-WP_003917789.1;Parent=gene-DKM08_RS21755;Dbxref=GenBank:WP_003917789.1;Name=WP_003917789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21755;product=hypothetical protein;protein_id=WP_003917789.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 290750 291598 . - . ID=gene-DKM08_RS18420;Name=DKM08_RS18420;end_range=291598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18420;old_locus_tag=DKM08_18400;partial=true;pseudo=true;start_range=.,290750 NZ_QFYX01000003.1 Protein Homology CDS 290750 291598 . - 0 ID=cds-DKM08_RS18420;Parent=gene-DKM08_RS18420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=291598,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488867.1;locus_tag=DKM08_RS18420;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,290750;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 291816 293198 . - . ID=gene-DKM08_RS18425;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=DKM08_RS18425;old_locus_tag=DKM08_18405 NZ_QFYX01000003.1 Protein Homology CDS 291816 293198 . - 0 ID=cds-WP_003418277.1;Parent=gene-DKM08_RS18425;Dbxref=GenBank:WP_003418277.1;Name=WP_003418277.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadB;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217949.1;locus_tag=DKM08_RS18425;product=glutamate decarboxylase;protein_id=WP_003418277.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 293236 294657 . - . ID=gene-DKM08_RS18430;Name=DKM08_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18430;old_locus_tag=DKM08_18410 NZ_QFYX01000003.1 Protein Homology CDS 293236 294657 . - 0 ID=cds-WP_003418280.1;Parent=gene-DKM08_RS18430;Dbxref=GenBank:WP_003418280.1;Name=WP_003418280.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217950.1;locus_tag=DKM08_RS18430;product=NAD(P)H-hydrate dehydratase;protein_id=WP_003418280.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 294659 295372 . - . ID=gene-DKM08_RS18435;Name=DKM08_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18435;old_locus_tag=DKM08_18415 NZ_QFYX01000003.1 Protein Homology CDS 294659 295372 . - 0 ID=cds-WP_003418284.1;Parent=gene-DKM08_RS18435;Dbxref=GenBank:WP_003418284.1;Name=WP_003418284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217951.1;locus_tag=DKM08_RS18435;product=rhomboid-like protein;protein_id=WP_003418284.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 295383 296237 . - . ID=gene-DKM08_RS18440;Name=DKM08_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18440;old_locus_tag=DKM08_18420 NZ_QFYX01000003.1 Protein Homology CDS 295383 296237 . - 0 ID=cds-WP_003901640.1;Parent=gene-DKM08_RS18440;Dbxref=GenBank:WP_003901640.1;Name=WP_003901640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217952.1;locus_tag=DKM08_RS18440;product=DUF4436 domain-containing protein;protein_id=WP_003901640.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 296459 298333 . - . ID=gene-DKM08_RS18445;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=DKM08_RS18445;old_locus_tag=DKM08_18425 NZ_QFYX01000003.1 Protein Homology CDS 296459 298333 . - 0 ID=cds-WP_003418289.1;Parent=gene-DKM08_RS18445;Dbxref=GenBank:WP_003418289.1;Name=WP_003418289.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217953.1;locus_tag=DKM08_RS18445;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_003418289.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 298355 298831 . + . ID=gene-DKM08_RS18450;Name=DKM08_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18450;old_locus_tag=DKM08_18430 NZ_QFYX01000003.1 Protein Homology CDS 298355 298831 . + 0 ID=cds-WP_010950888.1;Parent=gene-DKM08_RS18450;Dbxref=GenBank:WP_010950888.1;Name=WP_010950888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217954.1;locus_tag=DKM08_RS18450;product=DUF2510 domain-containing protein;protein_id=WP_010950888.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 298841 299683 . + . ID=gene-DKM08_RS18455;Name=DKM08_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18455;old_locus_tag=DKM08_18435 NZ_QFYX01000003.1 Protein Homology CDS 298841 299683 . + 0 ID=cds-WP_023349620.1;Parent=gene-DKM08_RS18455;Dbxref=GenBank:WP_023349620.1;Name=WP_023349620.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217955.1;locus_tag=DKM08_RS18455;product=dienelactone hydrolase family protein;protein_id=WP_023349620.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 299703 301106 . - . ID=gene-DKM08_RS18460;Name=DKM08_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18460;old_locus_tag=DKM08_18440 NZ_QFYX01000003.1 Protein Homology CDS 299703 301106 . - 0 ID=cds-WP_003418300.1;Parent=gene-DKM08_RS18460;Dbxref=GenBank:WP_003418300.1;Name=WP_003418300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217956.1;locus_tag=DKM08_RS18460;product=hypothetical protein;protein_id=WP_003418300.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 301109 301420 . - . ID=gene-DKM08_RS18465;Name=DKM08_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18465;old_locus_tag=DKM08_18445 NZ_QFYX01000003.1 Protein Homology CDS 301109 301420 . - 0 ID=cds-WP_003418301.1;Parent=gene-DKM08_RS18465;Dbxref=GenBank:WP_003418301.1;Name=WP_003418301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217957.1;locus_tag=DKM08_RS18465;product=hypothetical protein;protein_id=WP_003418301.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 301468 302814 . - . ID=gene-DKM08_RS18470;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=DKM08_RS18470;old_locus_tag=DKM08_18450 NZ_QFYX01000003.1 Protein Homology CDS 301468 302814 . - 0 ID=cds-WP_003418304.1;Parent=gene-DKM08_RS18470;Dbxref=GenBank:WP_003418304.1;Name=WP_003418304.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217958.1;locus_tag=DKM08_RS18470;product=phosphoglucosamine mutase;protein_id=WP_003418304.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 302939 303394 . - . ID=gene-DKM08_RS18475;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=DKM08_RS18475;old_locus_tag=DKM08_18455 NZ_QFYX01000003.1 Protein Homology CDS 302939 303394 . - 0 ID=cds-WP_003418308.1;Parent=gene-DKM08_RS18475;Dbxref=GenBank:WP_003418308.1;Name=WP_003418308.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217959.1;locus_tag=DKM08_RS18475;product=30S ribosomal protein S9;protein_id=WP_003418308.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 303391 303834 . - . ID=gene-DKM08_RS18480;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=DKM08_RS18480;old_locus_tag=DKM08_18460 NZ_QFYX01000003.1 Protein Homology CDS 303391 303834 . - 0 ID=cds-WP_003418312.1;Parent=gene-DKM08_RS18480;Dbxref=GenBank:WP_003418312.1;Name=WP_003418312.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217960.1;locus_tag=DKM08_RS18480;product=50S ribosomal protein L13;protein_id=WP_003418312.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 304067 304369 . - . ID=gene-DKM08_RS18485;Name=esxT;gbkey=Gene;gene=esxT;gene_biotype=protein_coding;locus_tag=DKM08_RS18485;old_locus_tag=DKM08_18465 NZ_QFYX01000003.1 Protein Homology CDS 304067 304369 . - 0 ID=cds-WP_003900059.1;Parent=gene-DKM08_RS18485;Dbxref=GenBank:WP_003900059.1;Name=WP_003900059.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxT;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217961.1;locus_tag=DKM08_RS18485;product=WXG100 family type VII secretion target;protein_id=WP_003900059.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 304390 304707 . - . ID=gene-DKM08_RS18490;Name=esxU;gbkey=Gene;gene=esxU;gene_biotype=protein_coding;locus_tag=DKM08_RS18490;old_locus_tag=DKM08_18470 NZ_QFYX01000003.1 Protein Homology CDS 304390 304707 . - 0 ID=cds-WP_003900060.1;Parent=gene-DKM08_RS18490;Dbxref=GenBank:WP_003900060.1;Name=WP_003900060.1;gbkey=CDS;gene=esxU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217962.2;locus_tag=DKM08_RS18490;product=type VII secretion system ESX-4 protein EsxU;protein_id=WP_003900060.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 304760 305974 . - . ID=gene-DKM08_RS18495;Name=DKM08_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18495;old_locus_tag=DKM08_18475 NZ_QFYX01000003.1 Protein Homology CDS 304760 305974 . - 0 ID=cds-WP_003418324.1;Parent=gene-DKM08_RS18495;Dbxref=GenBank:WP_003418324.1;Name=WP_003418324.1;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217963.1;locus_tag=DKM08_RS18495;product=type VII secretion-associated protein;protein_id=WP_003418324.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 305971 309681 . - . ID=gene-DKM08_RS18500;Name=eccC4;gbkey=Gene;gene=eccC4;gene_biotype=protein_coding;locus_tag=DKM08_RS18500;old_locus_tag=DKM08_18480 NZ_QFYX01000003.1 Protein Homology CDS 305971 309681 . - 0 ID=cds-WP_003418326.1;Parent=gene-DKM08_RS18500;Dbxref=GenBank:WP_003418326.1;Name=WP_003418326.1;gbkey=CDS;gene=eccC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217964.1;locus_tag=DKM08_RS18500;product=type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4;protein_id=WP_003418326.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 309795 311198 . + . ID=gene-DKM08_RS18505;Name=eccD4;gbkey=Gene;gene=eccD4;gene_biotype=protein_coding;locus_tag=DKM08_RS18505;old_locus_tag=DKM08_18485 NZ_QFYX01000003.1 Protein Homology CDS 309795 311198 . + 0 ID=cds-WP_003900062.1;Parent=gene-DKM08_RS18505;Dbxref=GenBank:WP_003900062.1;Name=WP_003900062.1;gbkey=CDS;gene=eccD4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217965.1;locus_tag=DKM08_RS18505;product=type VII secretion system ESX-4 subunit EccD4;protein_id=WP_003900062.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 311195 312562 . + . ID=gene-DKM08_RS18510;Name=mycP4;gbkey=Gene;gene=mycP4;gene_biotype=protein_coding;locus_tag=DKM08_RS18510;old_locus_tag=DKM08_18490 NZ_QFYX01000003.1 Protein Homology CDS 311195 312562 . + 0 ID=cds-WP_003418331.1;Parent=gene-DKM08_RS18510;Dbxref=GenBank:WP_003418331.1;Name=WP_003418331.1;gbkey=CDS;gene=mycP4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217966.1;locus_tag=DKM08_RS18510;product=type VII secretion system ESX-4 serine protease mycosin MycP4;protein_id=WP_003418331.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 312527 313939 . - . ID=gene-DKM08_RS18515;Name=eccB4;gbkey=Gene;gene=eccB4;gene_biotype=protein_coding;locus_tag=DKM08_RS18515;old_locus_tag=DKM08_18495 NZ_QFYX01000003.1 Protein Homology CDS 312527 313939 . - 0 ID=cds-WP_003418333.1;Parent=gene-DKM08_RS18515;Dbxref=GenBank:WP_003418333.1;Name=WP_003418333.1;gbkey=CDS;gene=eccB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217967.1;locus_tag=DKM08_RS18515;product=type VII secretion system ESX-4 subunit EccB4;protein_id=WP_003418333.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 314060 314848 . + . ID=gene-DKM08_RS18520;Name=DKM08_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18520;old_locus_tag=DKM08_18500 NZ_QFYX01000003.1 Protein Homology CDS 314060 314848 . + 0 ID=cds-WP_003418336.1;Parent=gene-DKM08_RS18520;Dbxref=GenBank:WP_003418336.1;Name=WP_003418336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217968.2;locus_tag=DKM08_RS18520;product=cutinase family protein;protein_id=WP_003418336.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 314895 315575 . + . ID=gene-DKM08_RS18525;Name=cut4;gbkey=Gene;gene=cut4;gene_biotype=protein_coding;locus_tag=DKM08_RS18525;old_locus_tag=DKM08_18505 NZ_QFYX01000003.1 Protein Homology CDS 314895 315575 . + 0 ID=cds-WP_003418339.1;Parent=gene-DKM08_RS18525;Dbxref=GenBank:WP_003418339.1;Name=WP_003418339.1;gbkey=CDS;gene=cut4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217969.1;locus_tag=DKM08_RS18525;product=cutinase Cut4;protein_id=WP_003418339.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 315847 317532 . + . ID=gene-DKM08_RS18535;Name=DKM08_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18535;old_locus_tag=DKM08_18515 NZ_QFYX01000003.1 Protein Homology CDS 315847 317532 . + 0 ID=cds-WP_010950891.1;Parent=gene-DKM08_RS18535;Dbxref=GenBank:WP_010950891.1;Name=WP_010950891.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719627.1;locus_tag=DKM08_RS18535;product=purine-cytosine permease family protein;protein_id=WP_010950891.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 317494 318387 . - . ID=gene-DKM08_RS18540;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=DKM08_RS18540;old_locus_tag=DKM08_18520 NZ_QFYX01000003.1 Protein Homology CDS 317494 318387 . - 0 ID=cds-WP_003418344.1;Parent=gene-DKM08_RS18540;Dbxref=GenBank:WP_003418344.1;Name=WP_003418344.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003418344.1;locus_tag=DKM08_RS18540;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_003418344.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 318332 318874 . - . ID=gene-DKM08_RS18545;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=DKM08_RS18545;old_locus_tag=DKM08_18525 NZ_QFYX01000003.1 Protein Homology CDS 318332 318874 . - 0 ID=cds-WP_003418346.1;Parent=gene-DKM08_RS18545;Dbxref=GenBank:WP_003418346.1;Name=WP_003418346.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217973.1;locus_tag=DKM08_RS18545;product=50S ribosomal protein L17;protein_id=WP_003418346.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 318906 319949 . - . ID=gene-DKM08_RS18550;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=DKM08_RS18550;old_locus_tag=DKM08_18530 NZ_QFYX01000003.1 Protein Homology CDS 318906 319949 . - 0 ID=cds-WP_003418351.1;Parent=gene-DKM08_RS18550;Dbxref=GenBank:WP_003418351.1;Name=WP_003418351.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217974.1;locus_tag=DKM08_RS18550;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_003418351.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 320100 320705 . - . ID=gene-DKM08_RS18555;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=DKM08_RS18555;old_locus_tag=DKM08_18535 NZ_QFYX01000003.1 Protein Homology CDS 320100 320705 . - 0 ID=cds-WP_003418354.1;Parent=gene-DKM08_RS18555;Dbxref=GenBank:WP_003418354.1;Name=WP_003418354.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217975.1;locus_tag=DKM08_RS18555;product=30S ribosomal protein S4;protein_id=WP_003418354.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 320714 321133 . - . ID=gene-DKM08_RS18560;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=DKM08_RS18560;old_locus_tag=DKM08_18540 NZ_QFYX01000003.1 Protein Homology CDS 320714 321133 . - 0 ID=cds-WP_003418357.1;Parent=gene-DKM08_RS18560;Dbxref=GenBank:WP_003418357.1;Name=WP_003418357.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217976.1;locus_tag=DKM08_RS18560;product=30S ribosomal protein S11;protein_id=WP_003418357.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 321137 321511 . - . ID=gene-DKM08_RS18565;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=DKM08_RS18565;old_locus_tag=DKM08_18545 NZ_QFYX01000003.1 Protein Homology CDS 321137 321511 . - 0 ID=cds-WP_003418360.1;Parent=gene-DKM08_RS18565;Dbxref=GenBank:WP_003418360.1;Name=WP_003418360.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217977.1;locus_tag=DKM08_RS18565;product=30S ribosomal protein S13;protein_id=WP_003418360.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 321727 321840 . - . ID=gene-DKM08_RS18570;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=DKM08_RS18570;old_locus_tag=DKM08_18550 NZ_QFYX01000003.1 Protein Homology CDS 321727 321840 . - 0 ID=cds-WP_003418367.1;Parent=gene-DKM08_RS18570;Dbxref=GenBank:WP_003418367.1;Name=WP_003418367.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006042225.1;locus_tag=DKM08_RS18570;product=50S ribosomal protein L36;protein_id=WP_003418367.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 321873 322094 . - . ID=gene-DKM08_RS18575;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=DKM08_RS18575;old_locus_tag=DKM08_18555 NZ_QFYX01000003.1 Protein Homology CDS 321873 322094 . - 0 ID=cds-WP_003418601.1;Parent=gene-DKM08_RS18575;Dbxref=GenBank:WP_003418601.1;Name=WP_003418601.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1;locus_tag=DKM08_RS18575;product=translation initiation factor IF-1;protein_id=WP_003418601.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 322348 323205 . + . ID=gene-DKM08_RS18580;Name=DKM08_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18580;old_locus_tag=DKM08_18560 NZ_QFYX01000003.1 Protein Homology CDS 322348 323205 . + 0 ID=cds-WP_003418604.1;Parent=gene-DKM08_RS18580;Dbxref=GenBank:WP_003418604.1;Name=WP_003418604.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217980.1;locus_tag=DKM08_RS18580;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003418604.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 323278 324273 . + . ID=gene-DKM08_RS18585;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=DKM08_RS18585;old_locus_tag=DKM08_18565 NZ_QFYX01000003.1 Protein Homology CDS 323278 324273 . + 0 ID=cds-WP_003418607.1;Parent=gene-DKM08_RS18585;Dbxref=GenBank:WP_003418607.1;Name=WP_003418607.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217981.1;locus_tag=DKM08_RS18585;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_003418607.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 324275 324883 . + . ID=gene-DKM08_RS18590;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=DKM08_RS18590;old_locus_tag=DKM08_18570 NZ_QFYX01000003.1 Protein Homology CDS 324275 324883 . + 0 ID=cds-WP_003418610.1;Parent=gene-DKM08_RS18590;Dbxref=GenBank:WP_003418610.1;Name=WP_003418610.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217982.1;locus_tag=DKM08_RS18590;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_003418610.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 324966 326358 . + . ID=gene-DKM08_RS18600;Name=DKM08_RS18600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18600;old_locus_tag=DKM08_18580;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 324966 326358 . + 0 ID=cds-DKM08_RS18600;Parent=gene-DKM08_RS18600;Note=frameshifted;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=DKM08_RS18600;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 326416 327510 . - . ID=gene-DKM08_RS18605;Name=DKM08_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18605;old_locus_tag=DKM08_18585 NZ_QFYX01000003.1 Protein Homology CDS 326416 327510 . - 0 ID=cds-WP_023349621.1;Parent=gene-DKM08_RS18605;Dbxref=GenBank:WP_023349621.1;Name=WP_023349621.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914158.1;locus_tag=DKM08_RS18605;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_023349621.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 327514 328524 . - . ID=gene-DKM08_RS18610;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=DKM08_RS18610;old_locus_tag=DKM08_18590 NZ_QFYX01000003.1 Protein Homology CDS 327514 328524 . - 0 ID=cds-WP_003900067.1;Parent=gene-DKM08_RS18610;Dbxref=GenBank:WP_003900067.1;Name=WP_003900067.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217986.1;locus_tag=DKM08_RS18610;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003900067.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 328585 330243 . - . ID=gene-DKM08_RS18615;Name=DKM08_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18615;old_locus_tag=DKM08_18595 NZ_QFYX01000003.1 Protein Homology CDS 328585 330243 . - 0 ID=cds-WP_003900704.1;Parent=gene-DKM08_RS18615;Dbxref=GenBank:WP_003900704.1;Name=WP_003900704.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0030976,GO:0050660,GO:0005948;gbkey=CDS;go_component=acetolactate synthase complex|0005948||IEA;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217987.1;locus_tag=DKM08_RS18615;product=thiamine pyrophosphate-binding protein;protein_id=WP_003900704.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 330249 330638 . - . ID=gene-DKM08_RS18620;Name=DKM08_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18620;old_locus_tag=DKM08_18600 NZ_QFYX01000003.1 Protein Homology CDS 330249 330638 . - 0 ID=cds-WP_176729012.1;Parent=gene-DKM08_RS18620;Dbxref=GenBank:WP_176729012.1;Name=WP_176729012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900069.1;locus_tag=DKM08_RS18620;product=cupin domain-containing protein;protein_id=WP_176729012.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 330803 331309 . + . ID=gene-DKM08_RS18625;Name=DKM08_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18625;old_locus_tag=DKM08_18605 NZ_QFYX01000003.1 Protein Homology CDS 330803 331309 . + 0 ID=cds-WP_003418774.1;Parent=gene-DKM08_RS18625;Dbxref=GenBank:WP_003418774.1;Name=WP_003418774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217989.1;locus_tag=DKM08_RS18625;product=nuclear transport factor 2 family protein;protein_id=WP_003418774.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 331389 332291 . - . ID=gene-DKM08_RS18630;Name=DKM08_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18630;old_locus_tag=DKM08_18610 NZ_QFYX01000003.1 Protein Homology CDS 331389 332291 . - 0 ID=cds-WP_015385316.1;Parent=gene-DKM08_RS18630;Dbxref=GenBank:WP_015385316.1;Name=WP_015385316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913481.1;locus_tag=DKM08_RS18630;product=alpha/beta fold hydrolase;protein_id=WP_015385316.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 332454 333803 . - . ID=gene-DKM08_RS18635;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=DKM08_RS18635;old_locus_tag=DKM08_18615 NZ_QFYX01000003.1 Protein Homology CDS 332454 333803 . - 0 ID=cds-WP_003418778.1;Parent=gene-DKM08_RS18635;Dbxref=GenBank:WP_003418778.1;Name=WP_003418778.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=kgtP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901651.1;locus_tag=DKM08_RS18635;product=MFS transporter;protein_id=WP_003418778.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 334176 334472 . + . ID=gene-DKM08_RS18640;Name=DKM08_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18640;old_locus_tag=DKM08_18620 NZ_QFYX01000003.1 Protein Homology CDS 334176 334472 . + 0 ID=cds-WP_023349622.1;Parent=gene-DKM08_RS18640;Dbxref=GenBank:WP_023349622.1;Name=WP_023349622.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177975.1;locus_tag=DKM08_RS18640;product=PE family protein;protein_id=WP_023349622.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 334509 335690 . + . ID=gene-DKM08_RS18645;Name=DKM08_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18645;old_locus_tag=DKM08_18625 NZ_QFYX01000003.1 Protein Homology CDS 334509 335690 . + 0 ID=cds-WP_003900072.1;Parent=gene-DKM08_RS18645;Dbxref=GenBank:WP_003900072.1;Name=WP_003900072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177976.1;locus_tag=DKM08_RS18645;product=PPE family protein;protein_id=WP_003900072.1;transl_table=11 NZ_QFYX01000003.1 RefSeq pseudogene 335903 338255 . + . ID=gene-DKM08_RS22575;Name=DKM08_RS22575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22575;old_locus_tag=DKM08_18630;pseudo=true NZ_QFYX01000003.1 Protein Homology CDS 335903 338255 . + 0 ID=cds-DKM08_RS22575;Parent=gene-DKM08_RS22575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913068.1;locus_tag=DKM08_RS22575;product=patatin-like protein;pseudo=true;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 338279 339772 . - . ID=gene-DKM08_RS18655;Name=DKM08_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18655;old_locus_tag=DKM08_18635 NZ_QFYX01000003.1 Protein Homology CDS 338279 339772 . - 0 ID=cds-WP_003418921.1;Parent=gene-DKM08_RS18655;Dbxref=GenBank:WP_003418921.1;Name=WP_003418921.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217997.1;locus_tag=DKM08_RS18655;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003418921.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 339863 340552 . - . ID=gene-DKM08_RS18660;Name=DKM08_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18660;old_locus_tag=DKM08_18640 NZ_QFYX01000003.1 Protein Homology CDS 339863 340552 . - 0 ID=cds-WP_003418922.1;Parent=gene-DKM08_RS18660;Dbxref=GenBank:WP_003418922.1;Name=WP_003418922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217998.1;locus_tag=DKM08_RS18660;product=GAP family protein;protein_id=WP_003418922.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 340694 341476 . - . ID=gene-DKM08_RS18665;Name=DKM08_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18665;old_locus_tag=DKM08_18645 NZ_QFYX01000003.1 Protein Homology CDS 340694 341476 . - 0 ID=cds-WP_003418925.1;Parent=gene-DKM08_RS18665;Dbxref=GenBank:WP_003418925.1;Name=WP_003418925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217999.1;locus_tag=DKM08_RS18665;product=DUF2510 domain-containing protein;protein_id=WP_003418925.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 341520 342182 . - . ID=gene-DKM08_RS18670;Name=DKM08_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18670;old_locus_tag=DKM08_18650 NZ_QFYX01000003.1 Protein Homology CDS 341520 342182 . - 0 ID=cds-WP_003418931.1;Parent=gene-DKM08_RS18670;Dbxref=GenBank:WP_003418931.1;Name=WP_003418931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218000.1;locus_tag=DKM08_RS18670;product=LppP/LprE family lipoprotein;protein_id=WP_003418931.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 342448 343986 . + . ID=gene-DKM08_RS18675;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=DKM08_RS18675;old_locus_tag=DKM08_18655 NZ_QFYX01000003.1 Protein Homology CDS 342448 343986 . + 0 ID=cds-WP_003900866.1;Parent=gene-DKM08_RS18675;Dbxref=GenBank:WP_003900866.1;Name=WP_003900866.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;gene=cpsA;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218001.1;locus_tag=DKM08_RS18675;product=LCP family protein;protein_id=WP_003900866.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 343992 344822 . - . ID=gene-DKM08_RS18680;Name=DKM08_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18680;old_locus_tag=DKM08_18660 NZ_QFYX01000003.1 Protein Homology CDS 343992 344822 . - 0 ID=cds-WP_003912250.1;Parent=gene-DKM08_RS18680;Dbxref=GenBank:WP_003912250.1;Name=WP_003912250.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912250.1;locus_tag=DKM08_RS18680;product=SDR family oxidoreductase;protein_id=WP_003912250.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 345142 345591 . + . ID=gene-DKM08_RS18690;Name=DKM08_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18690;old_locus_tag=DKM08_18670 NZ_QFYX01000003.1 Protein Homology CDS 345142 345591 . + 0 ID=cds-WP_003418942.1;Parent=gene-DKM08_RS18690;Dbxref=GenBank:WP_003418942.1;Name=WP_003418942.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218003.1;locus_tag=DKM08_RS18690;product=DoxX family protein;protein_id=WP_003418942.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 345544 346674 . - . ID=gene-DKM08_RS18695;Name=lipF;gbkey=Gene;gene=lipF;gene_biotype=protein_coding;locus_tag=DKM08_RS18695;old_locus_tag=DKM08_18675 NZ_QFYX01000003.1 Protein Homology CDS 345544 346674 . - 0 ID=cds-WP_003912251.1;Parent=gene-DKM08_RS18695;Dbxref=GenBank:WP_003912251.1;Name=WP_003912251.1;gbkey=CDS;gene=lipF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912251.1;locus_tag=DKM08_RS18695;product=carboxylesterase LipF;protein_id=WP_003912251.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 347037 347360 . + . ID=gene-DKM08_RS18700;Name=DKM08_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18700;old_locus_tag=DKM08_18680 NZ_QFYX01000003.1 Protein Homology CDS 347037 347360 . + 0 ID=cds-WP_010950901.1;Parent=gene-DKM08_RS18700;Dbxref=GenBank:WP_010950901.1;Name=WP_010950901.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218005.1;locus_tag=DKM08_RS18700;product=PadR family transcriptional regulator;protein_id=WP_010950901.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 347442 347606 . + . ID=gene-DKM08_RS18705;Name=DKM08_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18705;old_locus_tag=DKM08_18685 NZ_QFYX01000003.1 Protein Homology CDS 347442 347606 . + 0 ID=cds-WP_003418950.1;Parent=gene-DKM08_RS18705;Dbxref=GenBank:WP_003418950.1;Name=WP_003418950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218006.1;locus_tag=DKM08_RS18705;product=hypothetical protein;protein_id=WP_003418950.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 347606 349108 . + . ID=gene-DKM08_RS18710;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=DKM08_RS18710;old_locus_tag=DKM08_18690 NZ_QFYX01000003.1 Protein Homology CDS 347606 349108 . + 0 ID=cds-WP_003418951.1;Parent=gene-DKM08_RS18710;Dbxref=GenBank:WP_003418951.1;Name=WP_003418951.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218007.1;locus_tag=DKM08_RS18710;product=trehalose-6-phosphate synthase;protein_id=WP_003418951.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 349260 349838 . + . ID=gene-DKM08_RS18715;Name=DKM08_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18715;old_locus_tag=DKM08_18695 NZ_QFYX01000003.1 Protein Homology CDS 349260 349838 . + 0 ID=cds-WP_003418954.1;Parent=gene-DKM08_RS18715;Dbxref=GenBank:WP_003418954.1;Name=WP_003418954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218008.1;locus_tag=DKM08_RS18715;product=hypothetical protein;protein_id=WP_003418954.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 349835 350317 . - . ID=gene-DKM08_RS18720;Name=DKM08_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18720;old_locus_tag=DKM08_18700 NZ_QFYX01000003.1 Protein Homology CDS 349835 350317 . - 0 ID=cds-WP_003418958.1;Parent=gene-DKM08_RS18720;Dbxref=GenBank:WP_003418958.1;Name=WP_003418958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218009.1;locus_tag=DKM08_RS18720;product=Mce associated protein;protein_id=WP_003418958.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 350317 351045 . - . ID=gene-DKM08_RS18725;Name=DKM08_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18725;old_locus_tag=DKM08_18705 NZ_QFYX01000003.1 Protein Homology CDS 350317 351045 . - 0 ID=cds-WP_003418960.1;Parent=gene-DKM08_RS18725;Dbxref=GenBank:WP_003418960.1;Name=WP_003418960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218010.1;locus_tag=DKM08_RS18725;product=mammalian cell entry protein;protein_id=WP_003418960.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 351045 352739 . - . ID=gene-DKM08_RS18730;Name=DKM08_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18730;old_locus_tag=DKM08_18710 NZ_QFYX01000003.1 Protein Homology CDS 351045 352739 . - 0 ID=cds-WP_010950902.1;Parent=gene-DKM08_RS18730;Dbxref=GenBank:WP_010950902.1;Name=WP_010950902.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218011.1;locus_tag=DKM08_RS18730;product=virulence factor Mce family protein;protein_id=WP_010950902.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 352750 353904 . - . ID=gene-DKM08_RS18735;Name=lprN;gbkey=Gene;gene=lprN;gene_biotype=protein_coding;locus_tag=DKM08_RS18735;old_locus_tag=DKM08_18715 NZ_QFYX01000003.1 Protein Homology CDS 352750 353904 . - 0 ID=cds-WP_003418964.1;Parent=gene-DKM08_RS18735;Dbxref=GenBank:WP_003418964.1;Name=WP_003418964.1;gbkey=CDS;gene=lprN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218012.1;locus_tag=DKM08_RS18735;product=Mce family lipoprotein LprN;protein_id=WP_003418964.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 353901 355256 . - . ID=gene-DKM08_RS18740;Name=DKM08_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18740;old_locus_tag=DKM08_18720 NZ_QFYX01000003.1 Protein Homology CDS 353901 355256 . - 0 ID=cds-WP_003418966.1;Parent=gene-DKM08_RS18740;Dbxref=GenBank:WP_003418966.1;Name=WP_003418966.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218013.1;locus_tag=DKM08_RS18740;product=virulence factor Mce family protein;protein_id=WP_003418966.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 355253 356326 . - . ID=gene-DKM08_RS18745;Name=DKM08_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18745;old_locus_tag=DKM08_18725 NZ_QFYX01000003.1 Protein Homology CDS 355253 356326 . - 0 ID=cds-WP_003418967.1;Parent=gene-DKM08_RS18745;Dbxref=GenBank:WP_003418967.1;Name=WP_003418967.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218014.1;locus_tag=DKM08_RS18745;product=virulence factor Mce family protein;protein_id=WP_003418967.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 356316 357368 . - . ID=gene-DKM08_RS18750;Name=DKM08_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18750;old_locus_tag=DKM08_18730 NZ_QFYX01000003.1 Protein Homology CDS 356316 357368 . - 0 ID=cds-WP_003418972.1;Parent=gene-DKM08_RS18750;Dbxref=GenBank:WP_003418972.1;Name=WP_003418972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218015.1;locus_tag=DKM08_RS18750;product=virulence factor Mce family protein;protein_id=WP_003418972.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 357368 358570 . - . ID=gene-DKM08_RS18755;Name=mce4A;gbkey=Gene;gene=mce4A;gene_biotype=protein_coding;locus_tag=DKM08_RS18755;old_locus_tag=DKM08_18735 NZ_QFYX01000003.1 Protein Homology CDS 357368 358570 . - 0 ID=cds-WP_003418979.1;Parent=gene-DKM08_RS18755;Dbxref=GenBank:WP_003418979.1;Name=WP_003418979.1;gbkey=CDS;gene=mce4A;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177977.1;locus_tag=DKM08_RS18755;product=virulence factor Mce4A;protein_id=WP_003418979.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 358590 359432 . - . ID=gene-DKM08_RS18760;Name=DKM08_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18760;old_locus_tag=DKM08_18740 NZ_QFYX01000003.1 Protein Homology CDS 358590 359432 . - 0 ID=cds-WP_003418983.1;Parent=gene-DKM08_RS18760;Dbxref=GenBank:WP_003418983.1;Name=WP_003418983.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218017.1;locus_tag=DKM08_RS18760;product=ABC transporter permease;protein_id=WP_003418983.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 359467 360231 . - . ID=gene-DKM08_RS18765;Name=DKM08_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18765;old_locus_tag=DKM08_18745 NZ_QFYX01000003.1 Protein Homology CDS 359467 360231 . - 0 ID=cds-WP_003418986.1;Parent=gene-DKM08_RS18765;Dbxref=GenBank:WP_003418986.1;Name=WP_003418986.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218018.1;locus_tag=DKM08_RS18765;product=MlaE family ABC transporter permease;protein_id=WP_003418986.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 360457 361410 . - . ID=gene-DKM08_RS18770;Name=DKM08_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18770;old_locus_tag=DKM08_18750 NZ_QFYX01000003.1 Protein Homology CDS 360457 361410 . - 0 ID=cds-WP_003418990.1;Parent=gene-DKM08_RS18770;Dbxref=GenBank:WP_003418990.1;Name=WP_003418990.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218019.1;locus_tag=DKM08_RS18770;product=3-oxoacyl-ACP reductase;protein_id=WP_003418990.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 361435 361626 . - . ID=gene-DKM08_RS18775;Name=fdxD;gbkey=Gene;gene=fdxD;gene_biotype=protein_coding;locus_tag=DKM08_RS18775;old_locus_tag=DKM08_18755 NZ_QFYX01000003.1 Protein Homology CDS 361435 361626 . - 0 ID=cds-WP_003418993.1;Parent=gene-DKM08_RS18775;Dbxref=GenBank:WP_003418993.1;Name=WP_003418993.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;gene=fdxD;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218020.1;locus_tag=DKM08_RS18775;product=ferredoxin;protein_id=WP_003418993.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 361841 363043 . + . ID=gene-DKM08_RS18780;Name=DKM08_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18780;old_locus_tag=DKM08_18760 NZ_QFYX01000003.1 Protein Homology CDS 361841 363043 . + 0 ID=cds-WP_003418997.1;Parent=gene-DKM08_RS18780;Dbxref=GenBank:WP_003418997.1;Name=WP_003418997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218021.1;locus_tag=DKM08_RS18780;product=acyl-CoA dehydrogenase;protein_id=WP_003418997.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 363068 364189 . + . ID=gene-DKM08_RS18785;Name=DKM08_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18785;old_locus_tag=DKM08_18765 NZ_QFYX01000003.1 Protein Homology CDS 363068 364189 . + 0 ID=cds-WP_010950903.1;Parent=gene-DKM08_RS18785;Dbxref=GenBank:WP_010950903.1;Name=WP_010950903.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218022.1;locus_tag=DKM08_RS18785;product=acyl-CoA dehydrogenase family protein;protein_id=WP_010950903.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 364260 365768 . + . ID=gene-DKM08_RS18790;Name=fadD17;gbkey=Gene;gene=fadD17;gene_biotype=protein_coding;locus_tag=DKM08_RS18790;old_locus_tag=DKM08_18770 NZ_QFYX01000003.1 Protein Homology CDS 364260 365768 . + 0 ID=cds-WP_003901655.1;Parent=gene-DKM08_RS18790;Dbxref=GenBank:WP_003901655.1;Name=WP_003901655.1;gbkey=CDS;gene=fadD17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218023.1;locus_tag=DKM08_RS18790;product=long-chain-fatty-acid--CoA ligase FadD17;protein_id=WP_003901655.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 365939 370021 . + . ID=gene-DKM08_RS18795;Name=DKM08_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18795;old_locus_tag=DKM08_18775 NZ_QFYX01000003.1 Protein Homology CDS 365939 370021 . + 0 ID=cds-WP_010950904.1;Parent=gene-DKM08_RS18795;Dbxref=GenBank:WP_010950904.1;Name=WP_010950904.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177978.1;locus_tag=DKM08_RS18795;product=PE family protein;protein_id=WP_010950904.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 370312 374256 . + . ID=gene-DKM08_RS18800;Name=DKM08_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18800;old_locus_tag=DKM08_18780 NZ_QFYX01000003.1 Protein Homology CDS 370312 374256 . + 0 ID=cds-WP_147020927.1;Parent=gene-DKM08_RS18800;Dbxref=GenBank:WP_147020927.1;Name=WP_147020927.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330448.1;locus_tag=DKM08_RS18800;product=PE family protein;protein_id=WP_147020927.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 374423 375970 . - . ID=gene-DKM08_RS18805;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=DKM08_RS18805;old_locus_tag=DKM08_18785 NZ_QFYX01000003.1 Protein Homology CDS 374423 375970 . - 0 ID=cds-WP_003900872.1;Parent=gene-DKM08_RS18805;Dbxref=GenBank:WP_003900872.1;Name=WP_003900872.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;gene=ilvX;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218026.1;locus_tag=DKM08_RS18805;product=acetolactate synthase large subunit;protein_id=WP_003900872.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 375967 376803 . - . ID=gene-DKM08_RS18810;Name=DKM08_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18810;old_locus_tag=DKM08_18790 NZ_QFYX01000003.1 Protein Homology CDS 375967 376803 . - 0 ID=cds-WP_003421145.1;Parent=gene-DKM08_RS18810;Dbxref=GenBank:WP_003421145.1;Name=WP_003421145.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218027.1;locus_tag=DKM08_RS18810;product=amidohydrolase family protein;protein_id=WP_003421145.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 377163 382025 . + . ID=gene-DKM08_RS22820;Name=DKM08_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22820;old_locus_tag=DKM08_18795 NZ_QFYX01000003.1 Protein Homology CDS 377163 382025 . + 0 ID=cds-WP_147020928.1;Parent=gene-DKM08_RS22820;Dbxref=GenBank:WP_147020928.1;Name=WP_147020928.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775821.1;locus_tag=DKM08_RS22820;product=PE family protein;protein_id=WP_147020928.1;transl_table=11 NZ_QFYX01000003.1 RefSeq gene 382154 382286 . - . ID=gene-DKM08_RS22315;Name=DKM08_RS22315;end_range=382286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22315;old_locus_tag=DKM08_18800;partial=true NZ_QFYX01000003.1 Protein Homology CDS 382154 382286 . - 1 ID=cds-WP_234820993.1;Parent=gene-DKM08_RS22315;Dbxref=GenBank:WP_234820993.1;Name=WP_234820993.1;end_range=382286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294467.1;locus_tag=DKM08_RS22315;partial=true;product=hypothetical protein;protein_id=WP_234820993.1;transl_table=11 ##sequence-region NZ_QFYX01000004.1 1 317266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000004.1 RefSeq region 1 317266 . + . ID=NZ_QFYX01000004.1:1..317266;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000004.1 RefSeq gene 317 1606 . - . ID=gene-DKM08_RS18825;Name=DKM08_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18825;old_locus_tag=DKM08_18805 NZ_QFYX01000004.1 Protein Homology CDS 317 1606 . - 0 ID=cds-WP_003416640.1;Parent=gene-DKM08_RS18825;Dbxref=GenBank:WP_003416640.1;Name=WP_003416640.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217695.1;locus_tag=DKM08_RS18825;product=ATP-binding protein;protein_id=WP_003416640.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 1894 2187 . - . ID=gene-DKM08_RS18830;Name=DKM08_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18830;old_locus_tag=DKM08_18810 NZ_QFYX01000004.1 Protein Homology CDS 1894 2187 . - 0 ID=cds-WP_003416635.1;Parent=gene-DKM08_RS18830;Dbxref=GenBank:WP_003416635.1;Name=WP_003416635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030043.1;locus_tag=DKM08_RS18830;product=hypothetical protein;protein_id=WP_003416635.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 2200 2423 . - . ID=gene-DKM08_RS22320;Name=DKM08_RS22320;end_range=2423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22320;old_locus_tag=DKM08_18815;partial=true;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 2200 2423 . - 0 ID=cds-DKM08_RS22320;Parent=gene-DKM08_RS22320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011562696.1;locus_tag=DKM08_RS22320;partial=true;product=(R)-hydratase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 2427 2942 . - . ID=gene-DKM08_RS18840;Name=DKM08_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18840;old_locus_tag=DKM08_18820 NZ_QFYX01000004.1 Protein Homology CDS 2427 2942 . - 0 ID=cds-WP_003899950.1;Parent=gene-DKM08_RS18840;Dbxref=GenBank:WP_003899950.1;Name=WP_003899950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899950.1;locus_tag=DKM08_RS18840;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003899950.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 2917 3777 . - . ID=gene-DKM08_RS18845;Name=DKM08_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18845;old_locus_tag=DKM08_18825 NZ_QFYX01000004.1 Protein Homology CDS 2917 3777 . - 0 ID=cds-WP_003416628.1;Parent=gene-DKM08_RS18845;Dbxref=GenBank:WP_003416628.1;Name=WP_003416628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217693.1;locus_tag=DKM08_RS18845;product=alpha/beta fold hydrolase;protein_id=WP_003416628.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 3924 4879 . + . ID=gene-DKM08_RS18850;Name=mesT;gbkey=Gene;gene=mesT;gene_biotype=pseudogene;locus_tag=DKM08_RS18850;old_locus_tag=DKM08_18830;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 3924 4879 . + 0 ID=cds-DKM08_RS18850;Parent=gene-DKM08_RS18850;Note=frameshifted;gbkey=CDS;gene=mesT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177938.1;locus_tag=DKM08_RS18850;product=epoxide hydrolase MesT;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 4876 6363 . - . ID=gene-DKM08_RS18855;Name=DKM08_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18855;old_locus_tag=DKM08_18835 NZ_QFYX01000004.1 Protein Homology CDS 4876 6363 . - 0 ID=cds-WP_147020931.1;Parent=gene-DKM08_RS18855;Dbxref=GenBank:WP_147020931.1;Name=WP_147020931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217691.1;locus_tag=DKM08_RS18855;product=amidase;protein_id=WP_147020931.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 6378 7085 . - . ID=gene-DKM08_RS18860;Name=DKM08_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18860;old_locus_tag=DKM08_18840 NZ_QFYX01000004.1 Protein Homology CDS 6378 7085 . - 0 ID=cds-WP_003416620.1;Parent=gene-DKM08_RS18860;Dbxref=GenBank:WP_003416620.1;Name=WP_003416620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217690.1;locus_tag=DKM08_RS18860;product=SDR family oxidoreductase;protein_id=WP_003416620.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 7178 7780 . + . ID=gene-DKM08_RS18865;Name=DKM08_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18865;old_locus_tag=DKM08_18845 NZ_QFYX01000004.1 Protein Homology CDS 7178 7780 . + 0 ID=cds-WP_003416617.1;Parent=gene-DKM08_RS18865;Dbxref=GenBank:WP_003416617.1;Name=WP_003416617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217689.1;locus_tag=DKM08_RS18865;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416617.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 8056 8235 . + . ID=gene-DKM08_RS21765;Name=DKM08_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21765 NZ_QFYX01000004.1 Protein Homology CDS 8056 8235 . + 0 ID=cds-WP_003917749.1;Parent=gene-DKM08_RS21765;Dbxref=GenBank:WP_003917749.1;Name=WP_003917749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917749.1;locus_tag=DKM08_RS21765;product=hypothetical protein;protein_id=WP_003917749.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 8406 9377 . + . ID=gene-DKM08_RS18875;Name=hpx;gbkey=Gene;gene=hpx;gene_biotype=protein_coding;locus_tag=DKM08_RS18875;old_locus_tag=DKM08_18855 NZ_QFYX01000004.1 Protein Homology CDS 8406 9377 . + 0 ID=cds-WP_031657302.1;Parent=gene-DKM08_RS18875;Dbxref=GenBank:WP_031657302.1;Name=WP_031657302.1;gbkey=CDS;gene=hpx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393253.1;locus_tag=DKM08_RS18875;product=alpha/beta fold hydrolase;protein_id=WP_031657302.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 9372 10718 . - . ID=gene-DKM08_RS18880;Name=aofH;gbkey=Gene;gene=aofH;gene_biotype=protein_coding;locus_tag=DKM08_RS18880;old_locus_tag=DKM08_18860 NZ_QFYX01000004.1 Protein Homology CDS 9372 10718 . - 0 ID=cds-WP_003416607.1;Parent=gene-DKM08_RS18880;Dbxref=GenBank:WP_003416607.1;Name=WP_003416607.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;gene=aofH;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217686.1;locus_tag=DKM08_RS18880;product=flavin monoamine oxidase family protein;protein_id=WP_003416607.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 10861 11985 . - . ID=gene-DKM08_RS18885;Name=DKM08_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18885;old_locus_tag=DKM08_18865 NZ_QFYX01000004.1 Protein Homology CDS 10861 11985 . - 0 ID=cds-WP_003416605.1;Parent=gene-DKM08_RS18885;Dbxref=GenBank:WP_003416605.1;Name=WP_003416605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217685.1;locus_tag=DKM08_RS18885;product=hypothetical protein;protein_id=WP_003416605.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 11985 13121 . - . ID=gene-DKM08_RS18890;Name=DKM08_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18890;old_locus_tag=DKM08_18870 NZ_QFYX01000004.1 Protein Homology CDS 11985 13121 . - 0 ID=cds-WP_003900650.1;Parent=gene-DKM08_RS18890;Dbxref=GenBank:WP_003900650.1;Name=WP_003900650.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217684.1;locus_tag=DKM08_RS18890;product=phosphotransferase family protein;protein_id=WP_003900650.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 13166 13792 . + . ID=gene-DKM08_RS18895;Name=DKM08_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18895;old_locus_tag=DKM08_18875 NZ_QFYX01000004.1 Protein Homology CDS 13166 13792 . + 0 ID=cds-WP_003416599.1;Parent=gene-DKM08_RS18895;Dbxref=GenBank:WP_003416599.1;Name=WP_003416599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217683.1;locus_tag=DKM08_RS18895;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416599.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 13872 14831 . + . ID=gene-DKM08_RS18900;Name=DKM08_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18900;old_locus_tag=DKM08_18880 NZ_QFYX01000004.1 Protein Homology CDS 13872 14831 . + 0 ID=cds-WP_003900649.1;Parent=gene-DKM08_RS18900;Dbxref=GenBank:WP_003900649.1;Name=WP_003900649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217682.1;locus_tag=DKM08_RS18900;product=DUF4129 domain-containing protein;protein_id=WP_003900649.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 14828 15310 . + . ID=gene-DKM08_RS18905;Name=DKM08_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18905;old_locus_tag=DKM08_18885 NZ_QFYX01000004.1 Protein Homology CDS 14828 15310 . + 0 ID=cds-WP_003416593.1;Parent=gene-DKM08_RS18905;Dbxref=GenBank:WP_003416593.1;Name=WP_003416593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217681.1;locus_tag=DKM08_RS18905;product=hypothetical protein;protein_id=WP_003416593.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 15318 16280 . + . ID=gene-DKM08_RS18910;Name=DKM08_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18910;old_locus_tag=DKM08_18890 NZ_QFYX01000004.1 Protein Homology CDS 15318 16280 . + 0 ID=cds-WP_023349604.1;Parent=gene-DKM08_RS18910;Dbxref=GenBank:WP_023349604.1;Name=WP_023349604.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217680.1;locus_tag=DKM08_RS18910;product=AAA family ATPase;protein_id=WP_023349604.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 16310 17581 . + . ID=gene-DKM08_RS18915;Name=DKM08_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18915;old_locus_tag=DKM08_18895 NZ_QFYX01000004.1 Protein Homology CDS 16310 17581 . + 0 ID=cds-WP_003416584.1;Parent=gene-DKM08_RS18915;Dbxref=GenBank:WP_003416584.1;Name=WP_003416584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217679.1;locus_tag=DKM08_RS18915;product=DUF58 domain-containing protein;protein_id=WP_003416584.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 17578 18014 . + . ID=gene-DKM08_RS18920;Name=DKM08_RS18920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS18920;old_locus_tag=DKM08_18900;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 17578 18014 . + 0 ID=cds-DKM08_RS18920;Parent=gene-DKM08_RS18920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217678.1;locus_tag=DKM08_RS18920;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 18084 19232 . + . ID=gene-DKM08_RS18925;Name=DKM08_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18925;old_locus_tag=DKM08_18905 NZ_QFYX01000004.1 Protein Homology CDS 18084 19232 . + 0 ID=cds-WP_003416576.1;Parent=gene-DKM08_RS18925;Dbxref=GenBank:WP_003416576.1;Name=WP_003416576.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217677.1;locus_tag=DKM08_RS18925;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_003416576.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 19243 19884 . + . ID=gene-DKM08_RS18930;Name=DKM08_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18930;old_locus_tag=DKM08_18910 NZ_QFYX01000004.1 Protein Homology CDS 19243 19884 . + 0 ID=cds-WP_003416573.1;Parent=gene-DKM08_RS18930;Dbxref=GenBank:WP_003416573.1;Name=WP_003416573.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217676.1;locus_tag=DKM08_RS18930;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416573.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 20059 21960 . + . ID=gene-DKM08_RS18935;Name=DKM08_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18935;old_locus_tag=DKM08_18915 NZ_QFYX01000004.1 Protein Homology CDS 20059 21960 . + 0 ID=cds-WP_003902420.1;Parent=gene-DKM08_RS18935;Dbxref=GenBank:WP_003902420.1;Name=WP_003902420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=DKM08_RS18935;product=PPE family protein;protein_id=WP_003902420.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 22208 23980 . + . ID=gene-DKM08_RS18940;Name=DKM08_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS18940;old_locus_tag=DKM08_18920 NZ_QFYX01000004.1 Protein Homology CDS 22208 23980 . + 0 ID=cds-WP_070157438.1;Parent=gene-DKM08_RS18940;Dbxref=GenBank:WP_070157438.1;Name=WP_070157438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=DKM08_RS18940;product=PPE family protein;protein_id=WP_070157438.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 23986 25581 . - . ID=gene-DKM08_RS18945;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=DKM08_RS18945;old_locus_tag=DKM08_18925 NZ_QFYX01000004.1 Protein Homology CDS 23986 25581 . - 0 ID=cds-WP_003900644.1;Parent=gene-DKM08_RS18945;Dbxref=GenBank:WP_003900644.1;Name=WP_003900644.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217674.1;locus_tag=DKM08_RS18945;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_003900644.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 25578 27239 . - . ID=gene-DKM08_RS18950;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=DKM08_RS18950;old_locus_tag=DKM08_18930 NZ_QFYX01000004.1 Protein Homology CDS 25578 27239 . - 0 ID=cds-WP_011799324.1;Parent=gene-DKM08_RS18950;Dbxref=GenBank:WP_011799324.1;Name=WP_011799324.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217673.1;locus_tag=DKM08_RS18950;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_011799324.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 27236 29137 . - . ID=gene-DKM08_RS18955;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=DKM08_RS18955;old_locus_tag=DKM08_18935 NZ_QFYX01000004.1 Protein Homology CDS 27236 29137 . - 0 ID=cds-WP_003900642.1;Parent=gene-DKM08_RS18955;Dbxref=GenBank:WP_003900642.1;Name=WP_003900642.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217672.1;locus_tag=DKM08_RS18955;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_003900642.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 29148 29447 . - . ID=gene-DKM08_RS18960;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=DKM08_RS18960;old_locus_tag=DKM08_18940 NZ_QFYX01000004.1 Protein Homology CDS 29148 29447 . - 0 ID=cds-WP_003416452.1;Parent=gene-DKM08_RS18960;Dbxref=GenBank:WP_003416452.1;Name=WP_003416452.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217671.1;locus_tag=DKM08_RS18960;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_003416452.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 29444 30232 . - . ID=gene-DKM08_RS18965;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=DKM08_RS18965;old_locus_tag=DKM08_18945 NZ_QFYX01000004.1 Protein Homology CDS 29444 30232 . - 0 ID=cds-WP_003416449.1;Parent=gene-DKM08_RS18965;Dbxref=GenBank:WP_003416449.1;Name=WP_003416449.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217670.1;locus_tag=DKM08_RS18965;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_003416449.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 30229 30864 . - . ID=gene-DKM08_RS18970;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=DKM08_RS18970;old_locus_tag=DKM08_18950 NZ_QFYX01000004.1 Protein Homology CDS 30229 30864 . - 0 ID=cds-WP_003416447.1;Parent=gene-DKM08_RS18970;Dbxref=GenBank:WP_003416447.1;Name=WP_003416447.1;Ontology_term=GO:0016651;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217669.1;locus_tag=DKM08_RS18970;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_003416447.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 30857 32089 . - . ID=gene-DKM08_RS18975;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=DKM08_RS18975;old_locus_tag=DKM08_18955 NZ_QFYX01000004.1 Protein Homology CDS 30857 32089 . - 0 ID=cds-WP_003416445.1;Parent=gene-DKM08_RS18975;Dbxref=GenBank:WP_003416445.1;Name=WP_003416445.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217668.1;locus_tag=DKM08_RS18975;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_003416445.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 32205 34625 . - . ID=gene-DKM08_RS18980;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=DKM08_RS18980;old_locus_tag=DKM08_18960 NZ_QFYX01000004.1 Protein Homology CDS 32205 34625 . - 0 ID=cds-WP_003899937.1;Parent=gene-DKM08_RS18980;Dbxref=GenBank:WP_003899937.1;Name=WP_003899937.1;Ontology_term=GO:0042773,GO:0008137,GO:0043546,GO:0051536,GO:0016020;gbkey=CDS;gene=nuoG;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,molybdopterin cofactor binding|0043546||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217667.1;locus_tag=DKM08_RS18980;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_003899937.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 34622 35959 . - . ID=gene-DKM08_RS18985;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=DKM08_RS18985;old_locus_tag=DKM08_18965 NZ_QFYX01000004.1 Protein Homology CDS 34622 35959 . - 0 ID=cds-WP_003416439.1;Parent=gene-DKM08_RS18985;Dbxref=GenBank:WP_003416439.1;Name=WP_003416439.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217666.1;locus_tag=DKM08_RS18985;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_003416439.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 35956 36714 . - . ID=gene-DKM08_RS18990;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=DKM08_RS18990;old_locus_tag=DKM08_18970 NZ_QFYX01000004.1 Protein Homology CDS 35956 36714 . - 0 ID=cds-WP_003416434.1;Parent=gene-DKM08_RS18990;Dbxref=GenBank:WP_003416434.1;Name=WP_003416434.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217665.1;locus_tag=DKM08_RS18990;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_003416434.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 36711 38033 . - . ID=gene-DKM08_RS18995;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=DKM08_RS18995;old_locus_tag=DKM08_18975 NZ_QFYX01000004.1 Protein Homology CDS 36711 38033 . - 0 ID=cds-WP_003416430.1;Parent=gene-DKM08_RS18995;Dbxref=GenBank:WP_003416430.1;Name=WP_003416430.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217664.1;locus_tag=DKM08_RS18995;product=NADH dehydrogenase (quinone) subunit D;protein_id=WP_003416430.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 38033 38743 . - . ID=gene-DKM08_RS19000;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=DKM08_RS19000;old_locus_tag=DKM08_18980 NZ_QFYX01000004.1 Protein Homology CDS 38033 38743 . - 0 ID=cds-WP_003416425.1;Parent=gene-DKM08_RS19000;Dbxref=GenBank:WP_003416425.1;Name=WP_003416425.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217663.1;locus_tag=DKM08_RS19000;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_003416425.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 38740 39294 . - . ID=gene-DKM08_RS19005;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=DKM08_RS19005;old_locus_tag=DKM08_18985 NZ_QFYX01000004.1 Protein Homology CDS 38740 39294 . - 0 ID=cds-WP_003416420.1;Parent=gene-DKM08_RS19005;Dbxref=GenBank:WP_003416420.1;Name=WP_003416420.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;gene=nuoB;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874821.1;locus_tag=DKM08_RS19005;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_003416420.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 39303 39689 . - . ID=gene-DKM08_RS19010;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=DKM08_RS19010;old_locus_tag=DKM08_18990 NZ_QFYX01000004.1 Protein Homology CDS 39303 39689 . - 0 ID=cds-WP_003416417.1;Parent=gene-DKM08_RS19010;Dbxref=GenBank:WP_003416417.1;Name=WP_003416417.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217661.1;locus_tag=DKM08_RS19010;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_003416417.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 40054 41283 . + . ID=gene-DKM08_RS19015;Name=DKM08_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19015;old_locus_tag=DKM08_18995 NZ_QFYX01000004.1 Protein Homology CDS 40054 41283 . + 0 ID=cds-WP_003901551.1;Parent=gene-DKM08_RS19015;Dbxref=GenBank:WP_003901551.1;Name=WP_003901551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177936.2;locus_tag=DKM08_RS19015;product=PPE family protein;protein_id=WP_003901551.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 41316 41717 . - . ID=gene-DKM08_RS19020;Name=DKM08_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19020;old_locus_tag=DKM08_19000 NZ_QFYX01000004.1 Protein Homology CDS 41316 41717 . - 0 ID=cds-WP_003416410.1;Parent=gene-DKM08_RS19020;Dbxref=GenBank:WP_003416410.1;Name=WP_003416410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217659.1;locus_tag=DKM08_RS19020;product=response regulator;protein_id=WP_003416410.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 41825 42253 . + . ID=gene-DKM08_RS19025;Name=DKM08_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19025;old_locus_tag=DKM08_19005 NZ_QFYX01000004.1 Protein Homology CDS 41825 42253 . + 0 ID=cds-WP_003416407.1;Parent=gene-DKM08_RS19025;Dbxref=GenBank:WP_003416407.1;Name=WP_003416407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217658.1;locus_tag=DKM08_RS19025;product=DUF6188 family protein;protein_id=WP_003416407.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 42305 43276 . - . ID=gene-DKM08_RS19030;Name=DKM08_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19030;old_locus_tag=DKM08_19010 NZ_QFYX01000004.1 Protein Homology CDS 42305 43276 . - 0 ID=cds-WP_003416403.1;Parent=gene-DKM08_RS19030;Dbxref=GenBank:WP_003416403.1;Name=WP_003416403.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217657.1;locus_tag=DKM08_RS19030;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003416403.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 43376 44581 . - . ID=gene-DKM08_RS19035;Name=DKM08_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19035;old_locus_tag=DKM08_19015 NZ_QFYX01000004.1 Protein Homology CDS 43376 44581 . - 0 ID=cds-WP_003899936.1;Parent=gene-DKM08_RS19035;Dbxref=GenBank:WP_003899936.1;Name=WP_003899936.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217656.1;locus_tag=DKM08_RS19035;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003899936.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 44602 46008 . - . ID=gene-DKM08_RS19040;Name=DKM08_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19040;old_locus_tag=DKM08_19020 NZ_QFYX01000004.1 Protein Homology CDS 44602 46008 . - 0 ID=cds-WP_003900638.1;Parent=gene-DKM08_RS19040;Dbxref=GenBank:WP_003900638.1;Name=WP_003900638.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217655.1;locus_tag=DKM08_RS19040;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900638.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 46088 47176 . - . ID=gene-DKM08_RS19045;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=DKM08_RS19045;old_locus_tag=DKM08_19025 NZ_QFYX01000004.1 Protein Homology CDS 46088 47176 . - 0 ID=cds-WP_011799323.1;Parent=gene-DKM08_RS19045;Dbxref=GenBank:WP_011799323.1;Name=WP_011799323.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217654.1;locus_tag=DKM08_RS19045;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_011799323.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 47196 47978 . - . ID=gene-DKM08_RS19050;Name=hisN;gbkey=Gene;gene=hisN;gene_biotype=protein_coding;locus_tag=DKM08_RS19050;old_locus_tag=DKM08_19030 NZ_QFYX01000004.1 Protein Homology CDS 47196 47978 . - 0 ID=cds-WP_003416388.1;Parent=gene-DKM08_RS19050;Dbxref=GenBank:WP_003416388.1;Name=WP_003416388.1;Ontology_term=GO:0000105,GO:0004401;gbkey=CDS;gene=hisN;go_function=histidinol-phosphatase activity|0004401||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217653.1;locus_tag=DKM08_RS19050;product=histidinol-phosphatase;protein_id=WP_003416388.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 48094 48426 . + . ID=gene-DKM08_RS19055;Name=DKM08_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19055;old_locus_tag=DKM08_19035 NZ_QFYX01000004.1 Protein Homology CDS 48094 48426 . + 0 ID=cds-WP_003416383.1;Parent=gene-DKM08_RS19055;Dbxref=GenBank:WP_003416383.1;Name=WP_003416383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411850.1;locus_tag=DKM08_RS19055;product=hypothetical protein;protein_id=WP_003416383.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 48435 49577 . - . ID=gene-DKM08_RS19060;Name=DKM08_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19060;old_locus_tag=DKM08_19040 NZ_QFYX01000004.1 Protein Homology CDS 48435 49577 . - 0 ID=cds-WP_003416381.1;Parent=gene-DKM08_RS19060;Dbxref=GenBank:WP_003416381.1;Name=WP_003416381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177935.1;locus_tag=DKM08_RS19060;product=PPE family protein;protein_id=WP_003416381.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 50229 51374 . - . ID=gene-DKM08_RS19075;Name=DKM08_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19075;old_locus_tag=DKM08_19055 NZ_QFYX01000004.1 Protein Homology CDS 50229 51374 . - 0 ID=cds-WP_003416376.1;Parent=gene-DKM08_RS19075;Dbxref=GenBank:WP_003416376.1;Name=WP_003416376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416381.1;locus_tag=DKM08_RS19075;product=PPE family protein;protein_id=WP_003416376.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 51959 52765 . + . ID=gene-DKM08_RS19085;Name=DKM08_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19085;old_locus_tag=DKM08_19065 NZ_QFYX01000004.1 Protein Homology CDS 51959 52765 . + 0 ID=cds-WP_003416373.1;Parent=gene-DKM08_RS19085;Dbxref=GenBank:WP_003416373.1;Name=WP_003416373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217650.1;locus_tag=DKM08_RS19085;product=universal stress protein;protein_id=WP_003416373.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 52793 53446 . + . ID=gene-DKM08_RS19090;Name=dosR;gbkey=Gene;gene=dosR;gene_biotype=protein_coding;gene_synonym=devR;locus_tag=DKM08_RS19090;old_locus_tag=DKM08_19070 NZ_QFYX01000004.1 Protein Homology CDS 52793 53446 . + 0 ID=cds-WP_003416369.1;Parent=gene-DKM08_RS19090;Dbxref=GenBank:WP_003416369.1;Name=WP_003416369.1;gbkey=CDS;gene=dosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217649.1;locus_tag=DKM08_RS19090;product=hypoxia response regulator transcription factor DosR/DevR;protein_id=WP_003416369.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 53443 55179 . + . ID=gene-DKM08_RS19095;Name=dosS;gbkey=Gene;gene=dosS;gene_biotype=protein_coding;gene_synonym=devS;locus_tag=DKM08_RS19095;old_locus_tag=DKM08_19075 NZ_QFYX01000004.1 Protein Homology CDS 53443 55179 . + 0 ID=cds-WP_003416363.1;Parent=gene-DKM08_RS19095;Dbxref=GenBank:WP_003416363.1;Name=WP_003416363.1;gbkey=CDS;gene=dosS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217648.1;locus_tag=DKM08_RS19095;product=hypoxia sensor histidine kinase DosS/DevS;protein_id=WP_003416363.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 55159 56157 . - . ID=gene-DKM08_RS19100;Name=DKM08_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19100;old_locus_tag=DKM08_19080 NZ_QFYX01000004.1 Protein Homology CDS 55159 56157 . - 0 ID=cds-WP_003416362.1;Parent=gene-DKM08_RS19100;Dbxref=GenBank:WP_003416362.1;Name=WP_003416362.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217647.3;locus_tag=DKM08_RS19100;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416362.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 56342 57733 . + . ID=gene-DKM08_RS19105;Name=tgs1;gbkey=Gene;gene=tgs1;gene_biotype=protein_coding;locus_tag=DKM08_RS19105;old_locus_tag=DKM08_19085 NZ_QFYX01000004.1 Protein Homology CDS 56342 57733 . + 0 ID=cds-WP_003899932.1;Parent=gene-DKM08_RS19105;Dbxref=GenBank:WP_003899932.1;Name=WP_003899932.1;gbkey=CDS;gene=tgs1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217646.1;locus_tag=DKM08_RS19105;product=diacyglycerol O-acyltransferase;protein_id=WP_003899932.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 57716 58048 . - . ID=gene-DKM08_RS19110;Name=DKM08_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19110;old_locus_tag=DKM08_19090 NZ_QFYX01000004.1 Protein Homology CDS 57716 58048 . - 0 ID=cds-WP_003416360.1;Parent=gene-DKM08_RS19110;Dbxref=GenBank:WP_003416360.1;Name=WP_003416360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416360.1;locus_tag=DKM08_RS19110;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003416360.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 58527 59108 . + . ID=gene-DKM08_RS19115;Name=DKM08_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19115;old_locus_tag=DKM08_19095 NZ_QFYX01000004.1 GeneMarkS-2+ CDS 58527 59108 . + 0 ID=cds-WP_003904179.1;Parent=gene-DKM08_RS19115;Dbxref=GenBank:WP_003904179.1;Name=WP_003904179.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS19115;product=integrase catalytic domain-containing protein;protein_id=WP_003904179.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 59190 59540 . + . ID=gene-DKM08_RS19120;Name=DKM08_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19120;old_locus_tag=DKM08_19100 NZ_QFYX01000004.1 Protein Homology CDS 59190 59540 . + 0 ID=cds-WP_003416355.1;Parent=gene-DKM08_RS19120;Dbxref=GenBank:WP_003416355.1;Name=WP_003416355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416355.1;locus_tag=DKM08_RS19120;product=hypothetical protein;protein_id=WP_003416355.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 59527 60561 . - . ID=gene-DKM08_RS19125;Name=DKM08_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19125;old_locus_tag=DKM08_19105 NZ_QFYX01000004.1 Protein Homology CDS 59527 60561 . - 0 ID=cds-WP_010950833.1;Parent=gene-DKM08_RS19125;Dbxref=GenBank:WP_010950833.1;Name=WP_010950833.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217643.1;locus_tag=DKM08_RS19125;product=Acg family FMN-binding oxidoreductase;protein_id=WP_010950833.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 61057 62232 . + . ID=gene-DKM08_RS19135;Name=DKM08_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19135;old_locus_tag=DKM08_19115 NZ_QFYX01000004.1 Protein Homology CDS 61057 62232 . + 0 ID=cds-WP_010950832.1;Parent=gene-DKM08_RS19135;Dbxref=GenBank:WP_010950832.1;Name=WP_010950832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177932.1;locus_tag=DKM08_RS19135;product=PPE family protein;protein_id=WP_010950832.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 62333 63202 . - . ID=gene-DKM08_RS19140;Name=moaR1;gbkey=Gene;gene=moaR1;gene_biotype=protein_coding;locus_tag=DKM08_RS19140;old_locus_tag=DKM08_19120 NZ_QFYX01000004.1 Protein Homology CDS 62333 63202 . - 0 ID=cds-WP_003900636.1;Parent=gene-DKM08_RS19140;Dbxref=GenBank:WP_003900636.1;Name=WP_003900636.1;gbkey=CDS;gene=moaR1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217640.1;locus_tag=DKM08_RS19140;product=transcriptional regulator MoaR1;protein_id=WP_003900636.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 63645 64139 . - . ID=gene-DKM08_RS19145;Name=DKM08_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19145;old_locus_tag=DKM08_19125 NZ_QFYX01000004.1 Protein Homology CDS 63645 64139 . - 0 ID=cds-WP_003910706.1;Parent=gene-DKM08_RS19145;Dbxref=GenBank:WP_003910706.1;Name=WP_003910706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217639.1;locus_tag=DKM08_RS19145;product=hypothetical protein;protein_id=WP_003910706.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 64149 64574 . - . ID=gene-DKM08_RS19150;Name=DKM08_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19150;old_locus_tag=DKM08_19130 NZ_QFYX01000004.1 Protein Homology CDS 64149 64574 . - 0 ID=cds-WP_003910705.1;Parent=gene-DKM08_RS19150;Dbxref=GenBank:WP_003910705.1;Name=WP_003910705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042840.4;locus_tag=DKM08_RS19150;product=DUF6788 family protein;protein_id=WP_003910705.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 64796 64915 . + . ID=gene-DKM08_RS19155;Name=DKM08_RS19155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19155;old_locus_tag=DKM08_19135;partial=true;pseudo=true;start_range=.,64796 NZ_QFYX01000004.1 Protein Homology CDS 64796 64915 . + 0 ID=cds-DKM08_RS19155;Parent=gene-DKM08_RS19155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011291581.1;locus_tag=DKM08_RS19155;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,64796;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 64997 65200 . - . ID=gene-DKM08_RS21770;Name=DKM08_RS21770;end_range=65200,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21770;partial=true;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 64997 65200 . - 0 ID=cds-DKM08_RS21770;Parent=gene-DKM08_RS21770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=65200,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217637.1;locus_tag=DKM08_RS21770;partial=true;product=cytochrome P450;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 65195 65959 . - . ID=gene-DKM08_RS19160;Name=DKM08_RS19160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19160;old_locus_tag=DKM08_19140;partial=true;pseudo=true;start_range=.,65195 NZ_QFYX01000004.1 Protein Homology CDS 65195 65959 . - 0 ID=cds-DKM08_RS19160;Parent=gene-DKM08_RS19160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=DKM08_RS19160;partial=true;product=sulfurtransferase;pseudo=true;start_range=.,65195;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 65988 67157 . - . ID=gene-DKM08_RS19165;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=DKM08_RS19165;old_locus_tag=DKM08_19145 NZ_QFYX01000004.1 Protein Homology CDS 65988 67157 . - 0 ID=cds-WP_003899922.1;Parent=gene-DKM08_RS19165;Dbxref=GenBank:WP_003899922.1;Name=WP_003899922.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177929.1;locus_tag=DKM08_RS19165;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_003899922.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 67235 68482 . - . ID=gene-DKM08_RS19170;Name=DKM08_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19170;old_locus_tag=DKM08_19150 NZ_QFYX01000004.1 Protein Homology CDS 67235 68482 . - 0 ID=cds-WP_003904572.1-4;Parent=gene-DKM08_RS19170;Dbxref=GenBank:WP_003904572.1;Name=WP_003904572.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=DKM08_RS19170;product=IS256-like element IS1081 family transposase;protein_id=WP_003904572.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 68644 69174 . - . ID=gene-DKM08_RS19180;Name=DKM08_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19180;old_locus_tag=DKM08_19160 NZ_QFYX01000004.1 Protein Homology CDS 68644 69174 . - 0 ID=cds-WP_003901545.1;Parent=gene-DKM08_RS19180;Dbxref=GenBank:WP_003901545.1;Name=WP_003901545.1;Ontology_term=GO:0009116,GO:0001882,GO:0008270,GO:0019239;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217630.1;locus_tag=DKM08_RS19180;product=nucleoside deaminase;protein_id=WP_003901545.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 69191 69859 . - . ID=gene-DKM08_RS19185;Name=DKM08_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19185;old_locus_tag=DKM08_19165 NZ_QFYX01000004.1 Protein Homology CDS 69191 69859 . - 0 ID=cds-WP_010950829.1;Parent=gene-DKM08_RS19185;Dbxref=GenBank:WP_010950829.1;Name=WP_010950829.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217629.1;locus_tag=DKM08_RS19185;product=HAD family hydrolase;protein_id=WP_010950829.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 69981 70232 . - . ID=gene-DKM08_RS19190;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=DKM08_RS19190;old_locus_tag=DKM08_19170 NZ_QFYX01000004.1 Protein Homology CDS 69981 70232 . - 0 ID=cds-WP_003899918.1;Parent=gene-DKM08_RS19190;Dbxref=GenBank:WP_003899918.1;Name=WP_003899918.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177928.1;locus_tag=DKM08_RS19190;product=molybdopterin converting factor subunit 1;protein_id=WP_003899918.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 70249 70761 . - . ID=gene-DKM08_RS19195;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=DKM08_RS19195;old_locus_tag=DKM08_19175 NZ_QFYX01000004.1 Protein Homology CDS 70249 70761 . - 0 ID=cds-WP_003899917.1;Parent=gene-DKM08_RS19195;Dbxref=GenBank:WP_003899917.1;Name=WP_003899917.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177927.1;locus_tag=DKM08_RS19195;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003899917.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 70758 71153 . - . ID=gene-DKM08_RS19200;Name=DKM08_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19200;old_locus_tag=DKM08_19180 NZ_QFYX01000004.1 Protein Homology CDS 70758 71153 . - 0 ID=cds-WP_003416149.1;Parent=gene-DKM08_RS19200;Dbxref=GenBank:WP_003416149.1;Name=WP_003416149.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177926.1;locus_tag=DKM08_RS19200;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003416149.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 71204 72283 . - . ID=gene-DKM08_RS19205;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=DKM08_RS19205;old_locus_tag=DKM08_19185 NZ_QFYX01000004.1 Protein Homology CDS 71204 72283 . - 0 ID=cds-WP_003900633.1;Parent=gene-DKM08_RS19205;Dbxref=GenBank:WP_003900633.1;Name=WP_003900633.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177925.1;locus_tag=DKM08_RS19205;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003900633.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 72757 72960 . + . ID=gene-DKM08_RS21775;Name=DKM08_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21775 NZ_QFYX01000004.1 Protein Homology CDS 72757 72960 . + 0 ID=cds-WP_003913800.1;Parent=gene-DKM08_RS21775;Dbxref=GenBank:WP_003913800.1;Name=WP_003913800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913800.1;locus_tag=DKM08_RS21775;product=hypothetical protein;protein_id=WP_003913800.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 72971 74554 . + . ID=gene-DKM08_RS19215;Name=agpS;gbkey=Gene;gene=agpS;gene_biotype=protein_coding;locus_tag=DKM08_RS19215;old_locus_tag=DKM08_19195 NZ_QFYX01000004.1 Protein Homology CDS 72971 74554 . + 0 ID=cds-WP_003899914.1;Parent=gene-DKM08_RS19215;Dbxref=GenBank:WP_003899914.1;Name=WP_003899914.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=agpS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217623.1;locus_tag=DKM08_RS19215;product=FAD-binding oxidoreductase;protein_id=WP_003899914.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 74555 75925 . - . ID=gene-DKM08_RS19220;Name=fprA;gbkey=Gene;gene=fprA;gene_biotype=protein_coding;locus_tag=DKM08_RS19220;old_locus_tag=DKM08_19200 NZ_QFYX01000004.1 Protein Homology CDS 74555 75925 . - 0 ID=cds-WP_010950826.1;Parent=gene-DKM08_RS19220;Dbxref=GenBank:WP_010950826.1;Name=WP_010950826.1;gbkey=CDS;gene=fprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217622.1;locus_tag=DKM08_RS19220;product=ferredoxin--NADP(+) reductase FprA;protein_id=WP_010950826.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 76050 77165 . + . ID=gene-DKM08_RS19225;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=DKM08_RS19225;old_locus_tag=DKM08_19205 NZ_QFYX01000004.1 Protein Homology CDS 76050 77165 . + 0 ID=cds-WP_003416129.1;Parent=gene-DKM08_RS19225;Dbxref=GenBank:WP_003416129.1;Name=WP_003416129.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725809.1;locus_tag=DKM08_RS19225;product=peptide chain release factor 2;protein_id=WP_003416129.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 77155 78083 . + . ID=gene-DKM08_RS19230;Name=DKM08_RS19230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19230;old_locus_tag=DKM08_19210;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 77155 78083 . + 0 ID=cds-DKM08_RS19230;Parent=gene-DKM08_RS19230;Note=frameshifted;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217620.1;locus_tag=DKM08_RS19230;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 78085 78522 . + . ID=gene-DKM08_RS19235;Name=DKM08_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19235;old_locus_tag=DKM08_19215 NZ_QFYX01000004.1 Protein Homology CDS 78085 78522 . + 0 ID=cds-WP_003416124.1;Parent=gene-DKM08_RS19235;Dbxref=GenBank:WP_003416124.1;Name=WP_003416124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217619.1;locus_tag=DKM08_RS19235;product=hypothetical protein;protein_id=WP_003416124.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 78566 79255 . + . ID=gene-DKM08_RS19240;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=DKM08_RS19240;old_locus_tag=DKM08_19220 NZ_QFYX01000004.1 Protein Homology CDS 78566 79255 . + 0 ID=cds-WP_003416120.1;Parent=gene-DKM08_RS19240;Dbxref=GenBank:WP_003416120.1;Name=WP_003416120.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217618.1;locus_tag=DKM08_RS19240;product=cell division ATP-binding protein FtsE;protein_id=WP_003416120.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 79256 80149 . + . ID=gene-DKM08_RS19245;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=DKM08_RS19245;old_locus_tag=DKM08_19225 NZ_QFYX01000004.1 Protein Homology CDS 79256 80149 . + 0 ID=cds-WP_010950825.1;Parent=gene-DKM08_RS19245;Dbxref=GenBank:WP_010950825.1;Name=WP_010950825.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217617.1;locus_tag=DKM08_RS19245;product=permease-like cell division protein FtsX;protein_id=WP_010950825.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 80152 80634 . + . ID=gene-DKM08_RS19250;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=DKM08_RS19250;old_locus_tag=DKM08_19230 NZ_QFYX01000004.1 Protein Homology CDS 80152 80634 . + 0 ID=cds-WP_003416113.1;Parent=gene-DKM08_RS19250;Dbxref=GenBank:WP_003416113.1;Name=WP_003416113.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217616.1;locus_tag=DKM08_RS19250;product=SsrA-binding protein SmpB;protein_id=WP_003416113.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 80671 81522 . + . ID=gene-DKM08_RS19255;Name=DKM08_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19255;old_locus_tag=DKM08_19235 NZ_QFYX01000004.1 Protein Homology CDS 80671 81522 . + 0 ID=cds-WP_003416111.1;Parent=gene-DKM08_RS19255;Dbxref=GenBank:WP_003416111.1;Name=WP_003416111.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217615.1;locus_tag=DKM08_RS19255;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003416111.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 81601 81968 . + . ID=gene-DKM08_RS19260;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=DKM08_RS19260;old_locus_tag=DKM08_19240 NZ_QFYX01000004.1 cmsearch tmRNA 81601 81968 . + . ID=rna-DKM08_RS19260;Parent=gene-DKM08_RS19260;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS19260;product=transfer-messenger RNA NZ_QFYX01000004.1 cmsearch exon 81601 81968 . + . ID=exon-DKM08_RS19260-1;Parent=rna-DKM08_RS19260;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=DKM08_RS19260;product=transfer-messenger RNA NZ_QFYX01000004.1 RefSeq gene 82009 82329 . - . ID=gene-DKM08_RS19265;Name=pemK;gbkey=Gene;gene=pemK;gene_biotype=protein_coding;locus_tag=DKM08_RS19265;old_locus_tag=DKM08_19245 NZ_QFYX01000004.1 Protein Homology CDS 82009 82329 . - 0 ID=cds-WP_003416110.1;Parent=gene-DKM08_RS19265;Dbxref=GenBank:WP_003416110.1;Name=WP_003416110.1;gbkey=CDS;gene=pemK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411812.1;locus_tag=DKM08_RS19265;product=type II toxin-antitoxin system toxin endoribonuclease PemK;protein_id=WP_003416110.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 82273 82725 . + . ID=gene-DKM08_RS19270;Name=DKM08_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19270;old_locus_tag=DKM08_19250 NZ_QFYX01000004.1 Protein Homology CDS 82273 82725 . + 0 ID=cds-WP_010950824.1;Parent=gene-DKM08_RS19270;Dbxref=GenBank:WP_010950824.1;Name=WP_010950824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217614.1;locus_tag=DKM08_RS19270;product=hypothetical protein;protein_id=WP_010950824.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 82844 84157 . + . ID=gene-DKM08_RS19275;Name=lipY;gbkey=Gene;gene=lipY;gene_biotype=protein_coding;locus_tag=DKM08_RS19275;old_locus_tag=DKM08_19255 NZ_QFYX01000004.1 Protein Homology CDS 82844 84157 . + 0 ID=cds-WP_003901542.1;Parent=gene-DKM08_RS19275;Dbxref=GenBank:WP_003901542.1;Name=WP_003901542.1;gbkey=CDS;gene=lipY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177924.1;locus_tag=DKM08_RS19275;product=triacylglycerol lipase LipY;protein_id=WP_003901542.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 84249 85388 . - . ID=gene-DKM08_RS19280;Name=DKM08_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19280;old_locus_tag=DKM08_19260 NZ_QFYX01000004.1 Protein Homology CDS 84249 85388 . - 0 ID=cds-WP_003904991.1;Parent=gene-DKM08_RS19280;Dbxref=GenBank:WP_003904991.1;Name=WP_003904991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217612.1;locus_tag=DKM08_RS19280;product=hypothetical protein;protein_id=WP_003904991.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 85486 85962 . - . ID=gene-DKM08_RS19285;Name=DKM08_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19285;old_locus_tag=DKM08_19265 NZ_QFYX01000004.1 Protein Homology CDS 85486 85962 . - 0 ID=cds-WP_003416099.1;Parent=gene-DKM08_RS19285;Dbxref=GenBank:WP_003416099.1;Name=WP_003416099.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217611.1;locus_tag=DKM08_RS19285;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003416099.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 86044 87174 . + . ID=gene-DKM08_RS19290;Name=DKM08_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19290;old_locus_tag=DKM08_19270 NZ_QFYX01000004.1 Protein Homology CDS 86044 87174 . + 0 ID=cds-WP_003416097.1;Parent=gene-DKM08_RS19290;Dbxref=GenBank:WP_003416097.1;Name=WP_003416097.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217610.1;locus_tag=DKM08_RS19290;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003416097.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 87171 88175 . + . ID=gene-DKM08_RS19295;Name=DKM08_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19295;old_locus_tag=DKM08_19275 NZ_QFYX01000004.1 Protein Homology CDS 87171 88175 . + 0 ID=cds-WP_003416094.1;Parent=gene-DKM08_RS19295;Dbxref=GenBank:WP_003416094.1;Name=WP_003416094.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217609.1;locus_tag=DKM08_RS19295;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416094.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 88201 89121 . + . ID=gene-DKM08_RS19300;Name=DKM08_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19300;old_locus_tag=DKM08_19280 NZ_QFYX01000004.1 Protein Homology CDS 88201 89121 . + 0 ID=cds-WP_003416091.1;Parent=gene-DKM08_RS19300;Dbxref=GenBank:WP_003416091.1;Name=WP_003416091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217608.1;locus_tag=DKM08_RS19300;product=DUF808 domain-containing protein;protein_id=WP_003416091.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 89128 90819 . - . ID=gene-DKM08_RS19305;Name=DKM08_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19305;old_locus_tag=DKM08_19285 NZ_QFYX01000004.1 Protein Homology CDS 89128 90819 . - 0 ID=cds-WP_003900628.1;Parent=gene-DKM08_RS19305;Dbxref=GenBank:WP_003900628.1;Name=WP_003900628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217607.1;locus_tag=DKM08_RS19305;product=patatin-like phospholipase family protein;protein_id=WP_003900628.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 90837 91724 . - . ID=gene-DKM08_RS19310;Name=DKM08_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19310;old_locus_tag=DKM08_19290 NZ_QFYX01000004.1 Protein Homology CDS 90837 91724 . - 0 ID=cds-WP_003416086.1;Parent=gene-DKM08_RS19310;Dbxref=GenBank:WP_003416086.1;Name=WP_003416086.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217606.1;locus_tag=DKM08_RS19310;product=SPFH domain-containing protein;protein_id=WP_003416086.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 92663 94174 . - . ID=gene-DKM08_RS19325;Name=fadD13;gbkey=Gene;gene=fadD13;gene_biotype=protein_coding;locus_tag=DKM08_RS19325;old_locus_tag=DKM08_19305 NZ_QFYX01000004.1 Protein Homology CDS 92663 94174 . - 0 ID=cds-WP_003416081.1;Parent=gene-DKM08_RS19325;Dbxref=GenBank:WP_003416081.1;Name=WP_003416081.1;gbkey=CDS;gene=fadD13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217605.1;locus_tag=DKM08_RS19325;product=long-chain-fatty-acid--CoA ligase FadD13;protein_id=WP_003416081.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 94171 95595 . - . ID=gene-DKM08_RS19330;Name=DKM08_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19330;old_locus_tag=DKM08_19310 NZ_QFYX01000004.1 Protein Homology CDS 94171 95595 . - 0 ID=cds-WP_003416079.1;Parent=gene-DKM08_RS19330;Dbxref=GenBank:WP_003416079.1;Name=WP_003416079.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217604.1;locus_tag=DKM08_RS19330;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416079.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 95592 97010 . - . ID=gene-DKM08_RS19335;Name=DKM08_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19335;old_locus_tag=DKM08_19315 NZ_QFYX01000004.1 Protein Homology CDS 95592 97010 . - 0 ID=cds-WP_003416076.1;Parent=gene-DKM08_RS19335;Dbxref=GenBank:WP_003416076.1;Name=WP_003416076.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217603.1;locus_tag=DKM08_RS19335;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416076.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 97048 98154 . - . ID=gene-DKM08_RS19340;Name=adhD;gbkey=Gene;gene=adhD;gene_biotype=protein_coding;locus_tag=DKM08_RS19340;old_locus_tag=DKM08_19320 NZ_QFYX01000004.1 Protein Homology CDS 97048 98154 . - 0 ID=cds-WP_003416075.1;Parent=gene-DKM08_RS19340;Dbxref=GenBank:WP_003416075.1;Name=WP_003416075.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=adhD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217602.1;locus_tag=DKM08_RS19340;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003416075.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 98185 99015 . - . ID=gene-DKM08_RS19345;Name=DKM08_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19345;old_locus_tag=DKM08_19325 NZ_QFYX01000004.1 Protein Homology CDS 98185 99015 . - 0 ID=cds-WP_003416074.1;Parent=gene-DKM08_RS19345;Dbxref=GenBank:WP_003416074.1;Name=WP_003416074.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217601.1;locus_tag=DKM08_RS19345;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003416074.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 99012 99938 . - . ID=gene-DKM08_RS19350;Name=lipR;gbkey=Gene;gene=lipR;gene_biotype=protein_coding;locus_tag=DKM08_RS19350;old_locus_tag=DKM08_19330 NZ_QFYX01000004.1 Protein Homology CDS 99012 99938 . - 0 ID=cds-WP_003901538.1;Parent=gene-DKM08_RS19350;Dbxref=GenBank:WP_003901538.1;Name=WP_003901538.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217600.1;locus_tag=DKM08_RS19350;product=alpha/beta hydrolase;protein_id=WP_003901538.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 99944 101431 . - . ID=gene-DKM08_RS19355;Name=DKM08_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19355;old_locus_tag=DKM08_19335 NZ_QFYX01000004.1 Protein Homology CDS 99944 101431 . - 0 ID=cds-WP_003416069.1;Parent=gene-DKM08_RS19355;Dbxref=GenBank:WP_003416069.1;Name=WP_003416069.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217599.1;locus_tag=DKM08_RS19355;product=flavin-containing monooxygenase;protein_id=WP_003416069.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 101509 102531 . + . ID=gene-DKM08_RS19360;Name=virS;gbkey=Gene;gene=virS;gene_biotype=protein_coding;locus_tag=DKM08_RS19360;old_locus_tag=DKM08_19340 NZ_QFYX01000004.1 Protein Homology CDS 101509 102531 . + 0 ID=cds-WP_010950821.1;Parent=gene-DKM08_RS19360;Dbxref=GenBank:WP_010950821.1;Name=WP_010950821.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=virS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217598.1;locus_tag=DKM08_RS19360;product=AraC family transcriptional regulator;protein_id=WP_010950821.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 102657 103895 . - . ID=gene-DKM08_RS19365;Name=DKM08_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19365;old_locus_tag=DKM08_19345 NZ_QFYX01000004.1 Protein Homology CDS 102657 103895 . - 0 ID=cds-WP_023349602.1;Parent=gene-DKM08_RS19365;Dbxref=GenBank:WP_023349602.1;Name=WP_023349602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217597.1;locus_tag=DKM08_RS19365;product=nucleotidyltransferase;protein_id=WP_023349602.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 103947 107279 . + . ID=gene-DKM08_RS19370;Name=pknK;gbkey=Gene;gene=pknK;gene_biotype=protein_coding;locus_tag=DKM08_RS19370;old_locus_tag=DKM08_19350 NZ_QFYX01000004.1 Protein Homology CDS 103947 107279 . + 0 ID=cds-WP_003416064.1;Parent=gene-DKM08_RS19370;Dbxref=GenBank:WP_003416064.1;Name=WP_003416064.1;gbkey=CDS;gene=pknK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217596.1;locus_tag=DKM08_RS19370;product=serine/threonine protein kinase PknK;protein_id=WP_003416064.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 107338 108165 . + . ID=gene-DKM08_RS19375;Name=DKM08_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19375;old_locus_tag=DKM08_19355 NZ_QFYX01000004.1 Protein Homology CDS 107338 108165 . + 0 ID=cds-WP_003416061.1;Parent=gene-DKM08_RS19375;Dbxref=GenBank:WP_003416061.1;Name=WP_003416061.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217595.1;locus_tag=DKM08_RS19375;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416061.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 108181 108582 . - . ID=gene-DKM08_RS19380;Name=hab;gbkey=Gene;gene=hab;gene_biotype=protein_coding;locus_tag=DKM08_RS19380;old_locus_tag=DKM08_19360 NZ_QFYX01000004.1 Protein Homology CDS 108181 108582 . - 0 ID=cds-WP_003416059.1;Parent=gene-DKM08_RS19380;Dbxref=GenBank:WP_003416059.1;Name=WP_003416059.1;gbkey=CDS;gene=hab;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217594.1;locus_tag=DKM08_RS19380;product=hydrogenase;protein_id=WP_003416059.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 108583 110394 . - . ID=gene-DKM08_RS19385;Name=DKM08_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19385;old_locus_tag=DKM08_19365 NZ_QFYX01000004.1 Protein Homology CDS 108583 110394 . - 0 ID=cds-WP_003901535.1;Parent=gene-DKM08_RS19385;Dbxref=GenBank:WP_003901535.1;Name=WP_003901535.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177923.1;locus_tag=DKM08_RS19385;product=sulfatase-like hydrolase/transferase;protein_id=WP_003901535.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 110387 110863 . - . ID=gene-DKM08_RS19390;Name=DKM08_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19390;old_locus_tag=DKM08_19370 NZ_QFYX01000004.1 Protein Homology CDS 110387 110863 . - 0 ID=cds-WP_003416053.1;Parent=gene-DKM08_RS19390;Dbxref=GenBank:WP_003416053.1;Name=WP_003416053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217592.1;locus_tag=DKM08_RS19390;product=SRPBCC family protein;protein_id=WP_003416053.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 110962 111885 . + . ID=gene-DKM08_RS19395;Name=DKM08_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19395;old_locus_tag=DKM08_19375 NZ_QFYX01000004.1 Protein Homology CDS 110962 111885 . + 0 ID=cds-WP_003416052.1;Parent=gene-DKM08_RS19395;Dbxref=GenBank:WP_003416052.1;Name=WP_003416052.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217591.1;locus_tag=DKM08_RS19395;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_003416052.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 111882 113156 . - . ID=gene-DKM08_RS19400;Name=DKM08_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19400;old_locus_tag=DKM08_19380 NZ_QFYX01000004.1 Protein Homology CDS 111882 113156 . - 0 ID=cds-WP_003416051.1;Parent=gene-DKM08_RS19400;Dbxref=GenBank:WP_003416051.1;Name=WP_003416051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217590.1;locus_tag=DKM08_RS19400;product=HNH endonuclease;protein_id=WP_003416051.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 113250 113606 . + . ID=gene-DKM08_RS19405;Name=DKM08_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19405;old_locus_tag=DKM08_19385 NZ_QFYX01000004.1 Protein Homology CDS 113250 113606 . + 0 ID=cds-WP_003416050.1;Parent=gene-DKM08_RS19405;Dbxref=GenBank:WP_003416050.1;Name=WP_003416050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217589.1;locus_tag=DKM08_RS19405;product=DUF488 domain-containing protein;protein_id=WP_003416050.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 113640 114217 . + . ID=gene-DKM08_RS19410;Name=DKM08_RS19410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19410;old_locus_tag=DKM08_19390;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 113640 114217 . + 0 ID=cds-DKM08_RS19410;Parent=gene-DKM08_RS19410;Note=frameshifted;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=DKM08_RS19410;product=TIGR03619 family F420-dependent LLM class oxidoreductase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 114362 115471 . - . ID=gene-DKM08_RS19415;Name=DKM08_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19415;old_locus_tag=DKM08_19395 NZ_QFYX01000004.1 Protein Homology CDS 114362 115471 . - 0 ID=cds-WP_003901532.1;Parent=gene-DKM08_RS19415;Dbxref=GenBank:WP_003901532.1;Name=WP_003901532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217587.1;locus_tag=DKM08_RS19415;product=DUF190 domain-containing protein;protein_id=WP_003901532.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 115468 115848 . - . ID=gene-DKM08_RS19420;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=DKM08_RS19420;old_locus_tag=DKM08_19400 NZ_QFYX01000004.1 Protein Homology CDS 115468 115848 . - 0 ID=cds-WP_003416046.1;Parent=gene-DKM08_RS19420;Dbxref=GenBank:WP_003416046.1;Name=WP_003416046.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217586.1;locus_tag=DKM08_RS19420;product=fluoride efflux transporter CrcB;protein_id=WP_003416046.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 115845 116243 . - . ID=gene-DKM08_RS19425;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=DKM08_RS19425;old_locus_tag=DKM08_19405 NZ_QFYX01000004.1 Protein Homology CDS 115845 116243 . - 0 ID=cds-WP_003416045.1;Parent=gene-DKM08_RS19425;Dbxref=GenBank:WP_003416045.1;Name=WP_003416045.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217585.1;locus_tag=DKM08_RS19425;product=fluoride efflux transporter CrcB;protein_id=WP_003416045.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 116313 117956 . + . ID=gene-DKM08_RS19430;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=DKM08_RS19430;old_locus_tag=DKM08_19410 NZ_QFYX01000004.1 Protein Homology CDS 116313 117956 . + 0 ID=cds-WP_003899902.1;Parent=gene-DKM08_RS19430;Dbxref=GenBank:WP_003899902.1;Name=WP_003899902.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217584.1;locus_tag=DKM08_RS19430;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_003899902.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 118023 118095 . + . ID=gene-DKM08_RS19435;Name=DKM08_RS19435;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS19435;old_locus_tag=DKM08_19415 NZ_QFYX01000004.1 tRNAscan-SE tRNA 118023 118095 . + . ID=rna-DKM08_RS19435;Parent=gene-DKM08_RS19435;anticodon=(pos:118056..118058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS19435;product=tRNA-Ala NZ_QFYX01000004.1 tRNAscan-SE exon 118023 118095 . + . ID=exon-DKM08_RS19435-1;Parent=rna-DKM08_RS19435;anticodon=(pos:118056..118058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS19435;product=tRNA-Ala NZ_QFYX01000004.1 RefSeq gene 118097 118642 . - . ID=gene-DKM08_RS19440;Name=DKM08_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19440;old_locus_tag=DKM08_19420 NZ_QFYX01000004.1 Protein Homology CDS 118097 118642 . - 0 ID=cds-WP_003917120.1;Parent=gene-DKM08_RS19440;Dbxref=GenBank:WP_003917120.1;Name=WP_003917120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385303.1;locus_tag=DKM08_RS19440;product=DUF732 domain-containing protein;protein_id=WP_003917120.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 118620 119228 . - . ID=gene-DKM08_RS19445;Name=DKM08_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19445;old_locus_tag=DKM08_19425 NZ_QFYX01000004.1 Protein Homology CDS 118620 119228 . - 0 ID=cds-WP_003416005.1;Parent=gene-DKM08_RS19445;Dbxref=GenBank:WP_003416005.1;Name=WP_003416005.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217582.1;locus_tag=DKM08_RS19445;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416005.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 119225 119548 . - . ID=gene-DKM08_RS19450;Name=mmr;gbkey=Gene;gene=mmr;gene_biotype=protein_coding;locus_tag=DKM08_RS19450;old_locus_tag=DKM08_19430 NZ_QFYX01000004.1 Protein Homology CDS 119225 119548 . - 0 ID=cds-WP_003415995.1;Parent=gene-DKM08_RS19450;Dbxref=GenBank:WP_003415995.1;Name=WP_003415995.1;gbkey=CDS;gene=mmr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177922.1;locus_tag=DKM08_RS19450;product=multidrug efflux SMR transporter Mmr;protein_id=WP_003415995.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 119685 120110 . + . ID=gene-DKM08_RS19455;Name=DKM08_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19455;old_locus_tag=DKM08_19435 NZ_QFYX01000004.1 Protein Homology CDS 119685 120110 . + 0 ID=cds-WP_003415994.1;Parent=gene-DKM08_RS19455;Dbxref=GenBank:WP_003415994.1;Name=WP_003415994.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217580.1;locus_tag=DKM08_RS19455;product=DoxX family protein;protein_id=WP_003415994.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 120416 122692 . - . ID=gene-DKM08_RS19465;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=DKM08_RS19465;old_locus_tag=DKM08_19440 NZ_QFYX01000004.1 Protein Homology CDS 120416 122692 . - 0 ID=cds-WP_010950820.1;Parent=gene-DKM08_RS19465;Dbxref=GenBank:WP_010950820.1;Name=WP_010950820.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;gene=cstA;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217579.1;locus_tag=DKM08_RS19465;product=carbon starvation CstA family protein;protein_id=WP_010950820.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 122828 124351 . - . ID=gene-DKM08_RS19470;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=DKM08_RS19470;old_locus_tag=DKM08_19445 NZ_QFYX01000004.1 Protein Homology CDS 122828 124351 . - 0 ID=cds-WP_003415991.1;Parent=gene-DKM08_RS19470;Dbxref=GenBank:WP_003415991.1;Name=WP_003415991.1;Ontology_term=GO:0006281,GO:0006310,GO:0071897,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;gene=ligB;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA biosynthetic process|0071897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217578.1;locus_tag=DKM08_RS19470;product=ATP-dependent DNA ligase;protein_id=WP_003415991.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 124508 126674 . + . ID=gene-DKM08_RS19480;Name=DKM08_RS19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19480;old_locus_tag=DKM08_19455;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 124508 126674 . + 0 ID=cds-DKM08_RS19480;Parent=gene-DKM08_RS19480;Note=frameshifted;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217577.1;locus_tag=DKM08_RS19480;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 126791 128263 . + . ID=gene-DKM08_RS19485;Name=DKM08_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19485;old_locus_tag=DKM08_19460 NZ_QFYX01000004.1 Protein Homology CDS 126791 128263 . + 0 ID=cds-WP_003415989.1;Parent=gene-DKM08_RS19485;Dbxref=GenBank:WP_003415989.1;Name=WP_003415989.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217576.1;locus_tag=DKM08_RS19485;product=FadR/GntR family transcriptional regulator;protein_id=WP_003415989.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 129034 130512 . - . ID=gene-DKM08_RS19495;Name=DKM08_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19495;old_locus_tag=DKM08_19470 NZ_QFYX01000004.1 Protein Homology CDS 129034 130512 . - 0 ID=cds-WP_003415988.1;Parent=gene-DKM08_RS19495;Dbxref=GenBank:WP_003415988.1;Name=WP_003415988.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217575.1;locus_tag=DKM08_RS19495;product=cytochrome P450;protein_id=WP_003415988.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 130628 131278 . + . ID=gene-DKM08_RS19500;Name=DKM08_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19500;old_locus_tag=DKM08_19475 NZ_QFYX01000004.1 Protein Homology CDS 130628 131278 . + 0 ID=cds-WP_003415987.1;Parent=gene-DKM08_RS19500;Dbxref=GenBank:WP_003415987.1;Name=WP_003415987.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217574.1;locus_tag=DKM08_RS19500;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415987.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 131342 132205 . + . ID=gene-DKM08_RS19505;Name=DKM08_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19505;old_locus_tag=DKM08_19480 NZ_QFYX01000004.1 Protein Homology CDS 131342 132205 . + 0 ID=cds-WP_003415986.1;Parent=gene-DKM08_RS19505;Dbxref=GenBank:WP_003415986.1;Name=WP_003415986.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217573.1;locus_tag=DKM08_RS19505;product=SDR family oxidoreductase;protein_id=WP_003415986.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 132259 133299 . - . ID=gene-DKM08_RS19510;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=DKM08_RS19510;old_locus_tag=DKM08_19485 NZ_QFYX01000004.1 Protein Homology CDS 132259 133299 . - 0 ID=cds-WP_003899898.1;Parent=gene-DKM08_RS19510;Dbxref=GenBank:WP_003899898.1;Name=WP_003899898.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinP;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217572.1;locus_tag=DKM08_RS19510;product=DNA polymerase IV;protein_id=WP_003899898.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 133309 133923 . - . ID=gene-DKM08_RS19515;Name=DKM08_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19515;old_locus_tag=DKM08_19490 NZ_QFYX01000004.1 Protein Homology CDS 133309 133923 . - 0 ID=cds-WP_003415984.1;Parent=gene-DKM08_RS19515;Dbxref=GenBank:WP_003415984.1;Name=WP_003415984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217571.1;locus_tag=DKM08_RS19515;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415984.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 134015 134569 . + . ID=gene-DKM08_RS19520;Name=DKM08_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19520;old_locus_tag=DKM08_19495 NZ_QFYX01000004.1 Protein Homology CDS 134015 134569 . + 0 ID=cds-WP_003415983.1;Parent=gene-DKM08_RS19520;Dbxref=GenBank:WP_003415983.1;Name=WP_003415983.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217570.1;locus_tag=DKM08_RS19520;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_003415983.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 135032 135271 . + . ID=gene-DKM08_RS19530;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=DKM08_RS19530;old_locus_tag=DKM08_19505 NZ_QFYX01000004.1 Protein Homology CDS 135032 135271 . + 0 ID=cds-WP_003415982.1;Parent=gene-DKM08_RS19530;Dbxref=GenBank:WP_003415982.1;Name=WP_003415982.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217569.1;locus_tag=DKM08_RS19530;product=redoxin NrdH;protein_id=WP_003415982.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 135306 135758 . + . ID=gene-DKM08_RS19535;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=DKM08_RS19535;old_locus_tag=DKM08_19510 NZ_QFYX01000004.1 Protein Homology CDS 135306 135758 . + 0 ID=cds-WP_003415981.1;Parent=gene-DKM08_RS19535;Dbxref=GenBank:WP_003415981.1;Name=WP_003415981.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217568.1;locus_tag=DKM08_RS19535;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_003415981.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 135728 137905 . + . ID=gene-DKM08_RS19540;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=DKM08_RS19540;old_locus_tag=DKM08_19515 NZ_QFYX01000004.1 Protein Homology CDS 135728 137905 . + 0 ID=cds-WP_003914457.1;Parent=gene-DKM08_RS19540;Dbxref=GenBank:WP_003914457.1;Name=WP_003914457.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719502.1;locus_tag=DKM08_RS19540;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_003914457.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 138033 138773 . + . ID=gene-DKM08_RS19545;Name=DKM08_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19545;old_locus_tag=DKM08_19520 NZ_QFYX01000004.1 Protein Homology CDS 138033 138773 . + 0 ID=cds-WP_003415979.1;Parent=gene-DKM08_RS19545;Dbxref=GenBank:WP_003415979.1;Name=WP_003415979.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217566.1;locus_tag=DKM08_RS19545;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415979.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 138907 140481 . + . ID=gene-DKM08_RS19550;Name=DKM08_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19550;old_locus_tag=DKM08_19525 NZ_QFYX01000004.1 Protein Homology CDS 138907 140481 . + 0 ID=cds-WP_003899895.1;Parent=gene-DKM08_RS19550;Dbxref=GenBank:WP_003899895.1;Name=WP_003899895.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217565.1;locus_tag=DKM08_RS19550;product=flavin-containing monooxygenase;protein_id=WP_003899895.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 140612 141586 . + . ID=gene-DKM08_RS19555;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=DKM08_RS19555;old_locus_tag=DKM08_19530 NZ_QFYX01000004.1 Protein Homology CDS 140612 141586 . + 0 ID=cds-WP_003415973.1;Parent=gene-DKM08_RS19555;Dbxref=GenBank:WP_003415973.1;Name=WP_003415973.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177921.1;locus_tag=DKM08_RS19555;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003415973.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 141684 141968 . + . ID=gene-DKM08_RS19560;Name=DKM08_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19560;old_locus_tag=DKM08_19535 NZ_QFYX01000004.1 Protein Homology CDS 141684 141968 . + 0 ID=cds-WP_003899894.1;Parent=gene-DKM08_RS19560;Dbxref=GenBank:WP_003899894.1;Name=WP_003899894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217563.1;locus_tag=DKM08_RS19560;product=hypothetical protein;protein_id=WP_003899894.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 142302 142676 . + . ID=gene-DKM08_RS19565;Name=DKM08_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19565;old_locus_tag=DKM08_19540 NZ_QFYX01000004.1 Protein Homology CDS 142302 142676 . + 0 ID=cds-WP_003415968.1;Parent=gene-DKM08_RS19565;Dbxref=GenBank:WP_003415968.1;Name=WP_003415968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217562.1;locus_tag=DKM08_RS19565;product=DUF3349 domain-containing protein;protein_id=WP_003415968.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 142665 143705 . - . ID=gene-DKM08_RS19570;Name=adhC;gbkey=Gene;gene=adhC;gene_biotype=protein_coding;locus_tag=DKM08_RS19570;old_locus_tag=DKM08_19545 NZ_QFYX01000004.1 Protein Homology CDS 142665 143705 . - 0 ID=cds-WP_003415965.1;Parent=gene-DKM08_RS19570;Dbxref=GenBank:WP_003415965.1;Name=WP_003415965.1;Ontology_term=GO:0016491;gbkey=CDS;gene=adhC;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217561.1;locus_tag=DKM08_RS19570;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_003415965.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 143775 144854 . - . ID=gene-DKM08_RS19575;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=DKM08_RS19575;old_locus_tag=DKM08_19550 NZ_QFYX01000004.1 Protein Homology CDS 143775 144854 . - 0 ID=cds-WP_003415959.1;Parent=gene-DKM08_RS19575;Dbxref=GenBank:WP_003415959.1;Name=WP_003415959.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;gene=fecB;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217560.1;locus_tag=DKM08_RS19575;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_003415959.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 145069 146790 . + . ID=gene-DKM08_RS19585;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=DKM08_RS19585;old_locus_tag=DKM08_19560 NZ_QFYX01000004.1 Protein Homology CDS 145069 146790 . + 0 ID=cds-WP_003415946.1;Parent=gene-DKM08_RS19585;Dbxref=GenBank:WP_003415946.1;Name=WP_003415946.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217559.1;locus_tag=DKM08_RS19585;product=cytochrome c oxidase subunit I;protein_id=WP_003415946.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 146828 148057 . + . ID=gene-DKM08_RS19590;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=DKM08_RS19590;old_locus_tag=DKM08_19565 NZ_QFYX01000004.1 Protein Homology CDS 146828 148057 . + 0 ID=cds-WP_010950818.1;Parent=gene-DKM08_RS19590;Dbxref=GenBank:WP_010950818.1;Name=WP_010950818.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217558.1;locus_tag=DKM08_RS19590;product=phosphoserine phosphatase SerB;protein_id=WP_010950818.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 148072 148935 . + . ID=gene-DKM08_RS19595;Name=DKM08_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19595;old_locus_tag=DKM08_19570 NZ_QFYX01000004.1 Protein Homology CDS 148072 148935 . + 0 ID=cds-WP_003415944.1;Parent=gene-DKM08_RS19595;Dbxref=GenBank:WP_003415944.1;Name=WP_003415944.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217557.1;locus_tag=DKM08_RS19595;product=ABC transporter ATP-binding protein;protein_id=WP_003415944.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 148932 149798 . + . ID=gene-DKM08_RS19600;Name=DKM08_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19600;old_locus_tag=DKM08_19575 NZ_QFYX01000004.1 Protein Homology CDS 148932 149798 . + 0 ID=cds-WP_003415943.1;Parent=gene-DKM08_RS19600;Dbxref=GenBank:WP_003415943.1;Name=WP_003415943.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217556.1;locus_tag=DKM08_RS19600;product=NUDIX hydrolase;protein_id=WP_003415943.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 149807 150571 . + . ID=gene-DKM08_RS19605;Name=DKM08_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19605;old_locus_tag=DKM08_19580 NZ_QFYX01000004.1 Protein Homology CDS 149807 150571 . + 0 ID=cds-WP_003415942.1;Parent=gene-DKM08_RS19605;Dbxref=GenBank:WP_003415942.1;Name=WP_003415942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217555.1;locus_tag=DKM08_RS19605;product=enoyl-CoA hydratase;protein_id=WP_003415942.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 150582 151565 . + . ID=gene-DKM08_RS19610;Name=DKM08_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19610;old_locus_tag=DKM08_19585 NZ_QFYX01000004.1 Protein Homology CDS 150582 151565 . + 0 ID=cds-WP_003415941.1;Parent=gene-DKM08_RS19610;Dbxref=GenBank:WP_003415941.1;Name=WP_003415941.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217554.1;locus_tag=DKM08_RS19610;product=class I SAM-dependent methyltransferase;protein_id=WP_003415941.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 151562 152776 . + . ID=gene-DKM08_RS19615;Name=DKM08_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19615;old_locus_tag=DKM08_19590 NZ_QFYX01000004.1 Protein Homology CDS 151562 152776 . + 0 ID=cds-WP_178136157.1;Parent=gene-DKM08_RS19615;Dbxref=GenBank:WP_178136157.1;Name=WP_178136157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008259139.1;locus_tag=DKM08_RS19615;product=class I SAM-dependent methyltransferase;protein_id=WP_178136157.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 152849 153532 . + . ID=gene-DKM08_RS19620;Name=DKM08_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19620;old_locus_tag=DKM08_19595 NZ_QFYX01000004.1 Protein Homology CDS 152849 153532 . + 0 ID=cds-WP_010950816.1;Parent=gene-DKM08_RS19620;Dbxref=GenBank:WP_010950816.1;Name=WP_010950816.1;Ontology_term=GO:0006629,GO:0008126;gbkey=CDS;go_function=acetylesterase activity|0008126||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217552.1;locus_tag=DKM08_RS19620;product=esterase;protein_id=WP_010950816.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 153529 154776 . - . ID=gene-DKM08_RS19625;Name=DKM08_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19625;old_locus_tag=DKM08_19600 NZ_QFYX01000004.1 Protein Homology CDS 153529 154776 . - 0 ID=cds-WP_193586988.1;Parent=gene-DKM08_RS19625;Dbxref=GenBank:WP_193586988.1;Name=WP_193586988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725741.1;locus_tag=DKM08_RS19625;product=PQQ-binding-like beta-propeller repeat protein;protein_id=WP_193586988.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 155234 155971 . + . ID=gene-DKM08_RS19630;Name=DKM08_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19630;old_locus_tag=DKM08_19605 NZ_QFYX01000004.1 Protein Homology CDS 155234 155971 . + 0 ID=cds-WP_003415934.1;Parent=gene-DKM08_RS19630;Dbxref=GenBank:WP_003415934.1;Name=WP_003415934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288424.1;locus_tag=DKM08_RS19630;product=acyltransferase;protein_id=WP_003415934.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 156062 156610 . - . ID=gene-DKM08_RS19635;Name=DKM08_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19635;old_locus_tag=DKM08_19610 NZ_QFYX01000004.1 Protein Homology CDS 156062 156610 . - 0 ID=cds-WP_003415932.1;Parent=gene-DKM08_RS19635;Dbxref=GenBank:WP_003415932.1;Name=WP_003415932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217549.1;locus_tag=DKM08_RS19635;product=DUF4333 domain-containing protein;protein_id=WP_003415932.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 156789 157178 . - . ID=gene-DKM08_RS19640;Name=DKM08_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19640;old_locus_tag=DKM08_19615 NZ_QFYX01000004.1 Protein Homology CDS 156789 157178 . - 0 ID=cds-WP_003415930.1;Parent=gene-DKM08_RS19640;Dbxref=GenBank:WP_003415930.1;Name=WP_003415930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837058.1;locus_tag=DKM08_RS19640;product=hypothetical protein;protein_id=WP_003415930.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 157212 158456 . - . ID=gene-DKM08_RS19645;Name=DKM08_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19645;old_locus_tag=DKM08_19620 NZ_QFYX01000004.1 Protein Homology CDS 157212 158456 . - 0 ID=cds-WP_003415928.1;Parent=gene-DKM08_RS19645;Dbxref=GenBank:WP_003415928.1;Name=WP_003415928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217548.1;locus_tag=DKM08_RS19645;product=glycogen synthase;protein_id=WP_003415928.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 158488 160068 . - . ID=gene-DKM08_RS19650;Name=DKM08_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19650;old_locus_tag=DKM08_19625 NZ_QFYX01000004.1 Protein Homology CDS 158488 160068 . - 0 ID=cds-WP_003899891.1;Parent=gene-DKM08_RS19650;Dbxref=GenBank:WP_003899891.1;Name=WP_003899891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217547.1;locus_tag=DKM08_RS19650;product=glycoside hydrolase family 57 protein;protein_id=WP_003899891.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 160065 160889 . - . ID=gene-DKM08_RS19655;Name=DKM08_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19655;old_locus_tag=DKM08_19630 NZ_QFYX01000004.1 Protein Homology CDS 160065 160889 . - 0 ID=cds-WP_003415922.1;Parent=gene-DKM08_RS19655;Dbxref=GenBank:WP_003415922.1;Name=WP_003415922.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217546.1;locus_tag=DKM08_RS19655;product=class I SAM-dependent methyltransferase;protein_id=WP_003415922.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 161120 161920 . + . ID=gene-DKM08_RS19660;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=DKM08_RS19660;old_locus_tag=DKM08_19635 NZ_QFYX01000004.1 Protein Homology CDS 161120 161920 . + 0 ID=cds-WP_003415921.1;Parent=gene-DKM08_RS19660;Dbxref=GenBank:WP_003415921.1;Name=WP_003415921.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fixA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217545.1;locus_tag=DKM08_RS19660;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_003415921.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 161959 162915 . + . ID=gene-DKM08_RS19665;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=DKM08_RS19665;old_locus_tag=DKM08_19640 NZ_QFYX01000004.1 Protein Homology CDS 161959 162915 . + 0 ID=cds-WP_010950815.1;Parent=gene-DKM08_RS19665;Dbxref=GenBank:WP_010950815.1;Name=WP_010950815.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=fixB;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217544.1;locus_tag=DKM08_RS19665;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_010950815.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 163071 163916 . + . ID=gene-DKM08_RS19670;Name=DKM08_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19670;old_locus_tag=DKM08_19645 NZ_QFYX01000004.1 Protein Homology CDS 163071 163916 . + 0 ID=cds-WP_023349601.1;Parent=gene-DKM08_RS19670;Dbxref=GenBank:WP_023349601.1;Name=WP_023349601.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217543.2;locus_tag=DKM08_RS19670;product=GNAT family N-acetyltransferase;protein_id=WP_023349601.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 163913 164827 . + . ID=gene-DKM08_RS19675;Name=DKM08_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19675;old_locus_tag=DKM08_19650 NZ_QFYX01000004.1 Protein Homology CDS 163913 164827 . + 0 ID=cds-WP_003415914.1;Parent=gene-DKM08_RS19675;Dbxref=GenBank:WP_003415914.1;Name=WP_003415914.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217542.1;locus_tag=DKM08_RS19675;product=lysophospholipid acyltransferase family protein;protein_id=WP_003415914.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 164924 166105 . + . ID=gene-DKM08_RS19680;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=DKM08_RS19680;old_locus_tag=DKM08_19655 NZ_QFYX01000004.1 Protein Homology CDS 164924 166105 . + 0 ID=cds-WP_003415911.1;Parent=gene-DKM08_RS19680;Dbxref=GenBank:WP_003415911.1;Name=WP_003415911.1;Ontology_term=GO:0030170;gbkey=CDS;gene=iscS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217541.1;locus_tag=DKM08_RS19680;product=cysteine desulfurase family protein;protein_id=WP_003415911.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 166102 167205 . + . ID=gene-DKM08_RS19685;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=DKM08_RS19685;old_locus_tag=DKM08_19660 NZ_QFYX01000004.1 Protein Homology CDS 166102 167205 . + 0 ID=cds-WP_003415909.1;Parent=gene-DKM08_RS19685;Dbxref=GenBank:WP_003415909.1;Name=WP_003415909.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217540.1;locus_tag=DKM08_RS19685;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_003415909.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 167368 168615 . + . ID=gene-DKM08_RS19695;Name=DKM08_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19695;old_locus_tag=DKM08_19670 NZ_QFYX01000004.1 Protein Homology CDS 167368 168615 . + 0 ID=cds-WP_003904572.1-5;Parent=gene-DKM08_RS19695;Dbxref=GenBank:WP_003904572.1;Name=WP_003904572.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=DKM08_RS19695;product=IS256-like element IS1081 family transposase;protein_id=WP_003904572.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 168997 169311 . + . ID=gene-DKM08_RS19700;Name=DKM08_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19700;old_locus_tag=DKM08_19675 NZ_QFYX01000004.1 Protein Homology CDS 168997 169311 . + 0 ID=cds-WP_003415766.1;Parent=gene-DKM08_RS19700;Dbxref=GenBank:WP_003415766.1;Name=WP_003415766.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177685.1;locus_tag=DKM08_RS19700;product=PE family protein;protein_id=WP_003415766.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 169308 170615 . + . ID=gene-DKM08_RS19705;Name=DKM08_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19705;old_locus_tag=DKM08_19680 NZ_QFYX01000004.1 Protein Homology CDS 169308 170615 . + 0 ID=cds-WP_010950814.1;Parent=gene-DKM08_RS19705;Dbxref=GenBank:WP_010950814.1;Name=WP_010950814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330432.1;locus_tag=DKM08_RS19705;product=PPE family protein;protein_id=WP_010950814.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 170662 170955 . + . ID=gene-DKM08_RS19710;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=DKM08_RS19710;old_locus_tag=DKM08_19685 NZ_QFYX01000004.1 Protein Homology CDS 170662 170955 . + 0 ID=cds-WP_003415342.1;Parent=gene-DKM08_RS19710;Dbxref=GenBank:WP_003415342.1;Name=WP_003415342.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177919.1;locus_tag=DKM08_RS19710;product=type VII secretion system protein EsxG;protein_id=WP_003415342.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 170990 171280 . + . ID=gene-DKM08_RS19715;Name=esxR;gbkey=Gene;gene=esxR;gene_biotype=protein_coding;locus_tag=DKM08_RS19715;old_locus_tag=DKM08_19690 NZ_QFYX01000004.1 Protein Homology CDS 170990 171280 . + 0 ID=cds-WP_003415340.1;Parent=gene-DKM08_RS19715;Dbxref=GenBank:WP_003415340.1;Name=WP_003415340.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxR;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217535.1;locus_tag=DKM08_RS19715;product=WXG100 family type VII secretion target;protein_id=WP_003415340.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 171329 171496 . + . ID=gene-DKM08_RS21780;Name=DKM08_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21780 NZ_QFYX01000004.1 Protein Homology CDS 171329 171496 . + 0 ID=cds-WP_003917090.1;Parent=gene-DKM08_RS21780;Dbxref=GenBank:WP_003917090.1;Name=WP_003917090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917090.1;locus_tag=DKM08_RS21780;product=hypothetical protein;protein_id=WP_003917090.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 171683 172996 . + . ID=gene-DKM08_RS19725;Name=DKM08_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19725;old_locus_tag=DKM08_19700 NZ_QFYX01000004.1 Protein Homology CDS 171683 172996 . + 0 ID=cds-WP_011799310.1;Parent=gene-DKM08_RS19725;Dbxref=GenBank:WP_011799310.1;Name=WP_011799310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799310.1;locus_tag=DKM08_RS19725;product=PPE family protein;protein_id=WP_011799310.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 173083 173445 . + . ID=gene-DKM08_RS19730;Name=esxQ;gbkey=Gene;gene=esxQ;gene_biotype=protein_coding;locus_tag=DKM08_RS19730;old_locus_tag=DKM08_19705 NZ_QFYX01000004.1 Protein Homology CDS 173083 173445 . + 0 ID=cds-WP_003415272.1;Parent=gene-DKM08_RS19730;Dbxref=GenBank:WP_003415272.1;Name=WP_003415272.1;gbkey=CDS;gene=esxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217533.1;locus_tag=DKM08_RS19730;product=type VII secretion system ESX-3 effector EsxQ;protein_id=WP_003415272.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 173548 174177 . - . ID=gene-DKM08_RS19735;Name=lpqA;gbkey=Gene;gene=lpqA;gene_biotype=protein_coding;locus_tag=DKM08_RS19735;old_locus_tag=DKM08_19710 NZ_QFYX01000004.1 Protein Homology CDS 173548 174177 . - 0 ID=cds-WP_003415270.1;Parent=gene-DKM08_RS19735;Dbxref=GenBank:WP_003415270.1;Name=WP_003415270.1;gbkey=CDS;gene=lpqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217532.1;locus_tag=DKM08_RS19735;product=sensor domain-containing protein;protein_id=WP_003415270.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 174271 175284 . + . ID=gene-DKM08_RS19740;Name=DKM08_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19740;old_locus_tag=DKM08_19715 NZ_QFYX01000004.1 Protein Homology CDS 174271 175284 . + 0 ID=cds-WP_003415268.1;Parent=gene-DKM08_RS19740;Dbxref=GenBank:WP_003415268.1;Name=WP_003415268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217531.1;locus_tag=DKM08_RS19740;product=hypothetical protein;protein_id=WP_003415268.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 175315 177390 . + . ID=gene-DKM08_RS19745;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=DKM08_RS19745;old_locus_tag=DKM08_19720 NZ_QFYX01000004.1 Protein Homology CDS 175315 177390 . + 0 ID=cds-WP_003415263.1;Parent=gene-DKM08_RS19745;Dbxref=GenBank:WP_003415263.1;Name=WP_003415263.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217530.1;locus_tag=DKM08_RS19745;product=NAD-dependent DNA ligase LigA;protein_id=WP_003415263.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 177464 178120 . - . ID=gene-DKM08_RS19750;Name=DKM08_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19750;old_locus_tag=DKM08_19725 NZ_QFYX01000004.1 Protein Homology CDS 177464 178120 . - 0 ID=cds-WP_003901515.1;Parent=gene-DKM08_RS19750;Dbxref=GenBank:WP_003901515.1;Name=WP_003901515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217529.1;locus_tag=DKM08_RS19750;product=hypothetical protein;protein_id=WP_003901515.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 178205 178504 . + . ID=gene-DKM08_RS19755;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=DKM08_RS19755;old_locus_tag=DKM08_19730 NZ_QFYX01000004.1 Protein Homology CDS 178205 178504 . + 0 ID=cds-WP_003415256.1;Parent=gene-DKM08_RS19755;Dbxref=GenBank:WP_003415256.1;Name=WP_003415256.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217528.1;locus_tag=DKM08_RS19755;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_003415256.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 178501 179985 . + . ID=gene-DKM08_RS19760;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=DKM08_RS19760;old_locus_tag=DKM08_19735 NZ_QFYX01000004.1 Protein Homology CDS 178501 179985 . + 0 ID=cds-WP_010950812.1;Parent=gene-DKM08_RS19760;Dbxref=GenBank:WP_010950812.1;Name=WP_010950812.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217527.2;locus_tag=DKM08_RS19760;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_010950812.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 180081 181112 . + . ID=gene-DKM08_RS19765;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=DKM08_RS19765;old_locus_tag=DKM08_19740 NZ_QFYX01000004.1 Protein Homology CDS 180081 181112 . + 0 ID=cds-WP_003415251.1;Parent=gene-DKM08_RS19765;Dbxref=GenBank:WP_003415251.1;Name=WP_003415251.1;Ontology_term=GO:0006002,GO:0003872,GO:0005524,GO:0046872;gbkey=CDS;gene=pfkA;go_function=6-phosphofructokinase activity|0003872||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217526.1;locus_tag=DKM08_RS19765;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_003415251.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 181142 182671 . + . ID=gene-DKM08_RS19770;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=DKM08_RS19770;old_locus_tag=DKM08_19745 NZ_QFYX01000004.1 Protein Homology CDS 181142 182671 . + 0 ID=cds-WP_003415248.1;Parent=gene-DKM08_RS19770;Dbxref=GenBank:WP_003415248.1;Name=WP_003415248.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217525.1;locus_tag=DKM08_RS19770;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_003415248.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 182668 183291 . - . ID=gene-DKM08_RS19775;Name=DKM08_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19775;old_locus_tag=DKM08_19750 NZ_QFYX01000004.1 Protein Homology CDS 182668 183291 . - 0 ID=cds-WP_003899584.1;Parent=gene-DKM08_RS19775;Dbxref=GenBank:WP_003899584.1;Name=WP_003899584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217524.1;locus_tag=DKM08_RS19775;product=MgtC/SapB family protein;protein_id=WP_003899584.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 183485 184099 . + . ID=gene-DKM08_RS19780;Name=DKM08_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19780;old_locus_tag=DKM08_19755 NZ_QFYX01000004.1 Protein Homology CDS 183485 184099 . + 0 ID=cds-WP_003415174.1;Parent=gene-DKM08_RS19780;Dbxref=GenBank:WP_003415174.1;Name=WP_003415174.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217523.1;locus_tag=DKM08_RS19780;product=flavin reductase family protein;protein_id=WP_003415174.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 184105 185226 . - . ID=gene-DKM08_RS19785;Name=lppZ;gbkey=Gene;gene=lppZ;gene_biotype=protein_coding;locus_tag=DKM08_RS19785;old_locus_tag=DKM08_19760 NZ_QFYX01000004.1 Protein Homology CDS 184105 185226 . - 0 ID=cds-WP_010950811.1;Parent=gene-DKM08_RS19785;Dbxref=GenBank:WP_010950811.1;Name=WP_010950811.1;gbkey=CDS;gene=lppZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217522.1;locus_tag=DKM08_RS19785;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_010950811.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 185403 186242 . + . ID=gene-DKM08_RS19790;Name=DKM08_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19790;old_locus_tag=DKM08_19765 NZ_QFYX01000004.1 Protein Homology CDS 185403 186242 . + 0 ID=cds-WP_003415171.1;Parent=gene-DKM08_RS19790;Dbxref=GenBank:WP_003415171.1;Name=WP_003415171.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217521.1;locus_tag=DKM08_RS19790;product=DoxX family protein;protein_id=WP_003415171.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 186249 186626 . - . ID=gene-DKM08_RS19795;Name=DKM08_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19795;old_locus_tag=DKM08_19770 NZ_QFYX01000004.1 Protein Homology CDS 186249 186626 . - 0 ID=cds-WP_003900612.1;Parent=gene-DKM08_RS19795;Dbxref=GenBank:WP_003900612.1;Name=WP_003900612.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900612.1;locus_tag=DKM08_RS19795;product=PH domain-containing protein;protein_id=WP_003900612.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 186948 188804 . + . ID=gene-DKM08_RS19800;Name=DKM08_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19800;old_locus_tag=DKM08_19775 NZ_QFYX01000004.1 Protein Homology CDS 186948 188804 . + 0 ID=cds-WP_003415168.1;Parent=gene-DKM08_RS19800;Dbxref=GenBank:WP_003415168.1;Name=WP_003415168.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177917.1;locus_tag=DKM08_RS19800;product=acetolactate synthase large subunit;protein_id=WP_003415168.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 188804 189310 . + . ID=gene-DKM08_RS19805;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=DKM08_RS19805;old_locus_tag=DKM08_19780 NZ_QFYX01000004.1 Protein Homology CDS 188804 189310 . + 0 ID=cds-WP_003415167.1;Parent=gene-DKM08_RS19805;Dbxref=GenBank:WP_003415167.1;Name=WP_003415167.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217518.1;locus_tag=DKM08_RS19805;product=acetolactate synthase small subunit;protein_id=WP_003415167.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 189348 190349 . + . ID=gene-DKM08_RS19810;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=DKM08_RS19810;old_locus_tag=DKM08_19785 NZ_QFYX01000004.1 Protein Homology CDS 189348 190349 . + 0 ID=cds-WP_003899581.1;Parent=gene-DKM08_RS19810;Dbxref=GenBank:WP_003899581.1;Name=WP_003899581.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217517.3;locus_tag=DKM08_RS19810;product=ketol-acid reductoisomerase;protein_id=WP_003899581.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 190663 191322 . - . ID=gene-DKM08_RS19815;Name=DKM08_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19815;old_locus_tag=DKM08_19790 NZ_QFYX01000004.1 Protein Homology CDS 190663 191322 . - 0 ID=cds-WP_003415160.1;Parent=gene-DKM08_RS19815;Dbxref=GenBank:WP_003415160.1;Name=WP_003415160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217516.1;locus_tag=DKM08_RS19815;product=ABC transporter permease;protein_id=WP_003415160.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 191367 192332 . - . ID=gene-DKM08_RS19820;Name=lppY;gbkey=Gene;gene=lppY;gene_biotype=protein_coding;locus_tag=DKM08_RS19820;old_locus_tag=DKM08_19795 NZ_QFYX01000004.1 Protein Homology CDS 191367 192332 . - 0 ID=cds-WP_003901513.1;Parent=gene-DKM08_RS19820;Dbxref=GenBank:WP_003901513.1;Name=WP_003901513.1;gbkey=CDS;gene=lppY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217515.1;locus_tag=DKM08_RS19820;product=DUF1259 domain-containing protein;protein_id=WP_003901513.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 192515 192709 . + . ID=gene-DKM08_RS22330;Name=DKM08_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22330;old_locus_tag=DKM08_19800 NZ_QFYX01000004.1 Protein Homology CDS 192515 192709 . + 0 ID=cds-WP_229298038.1;Parent=gene-DKM08_RS22330;Dbxref=GenBank:WP_229298038.1;Name=WP_229298038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.6;locus_tag=DKM08_RS22330;product=hypothetical protein;protein_id=WP_229298038.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 192658 193071 . - . ID=gene-DKM08_RS22335;Name=DKM08_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22335;old_locus_tag=DKM08_19805 NZ_QFYX01000004.1 Protein Homology CDS 192658 193071 . - 0 ID=cds-WP_223695529.1;Parent=gene-DKM08_RS22335;Dbxref=GenBank:WP_223695529.1;Name=WP_223695529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217514.1;locus_tag=DKM08_RS22335;product=hypothetical protein;protein_id=WP_223695529.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 193001 193201 . + . ID=gene-DKM08_RS19830;Name=DKM08_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19830;old_locus_tag=DKM08_19810 NZ_QFYX01000004.1 Protein Homology CDS 193001 193201 . + 0 ID=cds-WP_003900610.1;Parent=gene-DKM08_RS19830;Dbxref=GenBank:WP_003900610.1;Name=WP_003900610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908129.1;locus_tag=DKM08_RS19830;product=DUF433 domain-containing protein;protein_id=WP_003900610.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 193393 194835 . - . ID=gene-DKM08_RS19835;Name=DKM08_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19835;old_locus_tag=DKM08_19815 NZ_QFYX01000004.1 Protein Homology CDS 193393 194835 . - 0 ID=cds-WP_010950810.1;Parent=gene-DKM08_RS19835;Dbxref=GenBank:WP_010950810.1;Name=WP_010950810.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217513.1;locus_tag=DKM08_RS19835;product=phytoene desaturase family protein;protein_id=WP_010950810.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 194865 196451 . + . ID=gene-DKM08_RS19840;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=DKM08_RS19840;old_locus_tag=DKM08_19820 NZ_QFYX01000004.1 Protein Homology CDS 194865 196451 . + 0 ID=cds-WP_003899578.1;Parent=gene-DKM08_RS19840;Dbxref=GenBank:WP_003899578.1;Name=WP_003899578.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177916.1;locus_tag=DKM08_RS19840;product=phosphoglycerate dehydrogenase;protein_id=WP_003899578.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 196466 197476 . + . ID=gene-DKM08_RS19845;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=DKM08_RS19845;old_locus_tag=DKM08_19825 NZ_QFYX01000004.1 Protein Homology CDS 196466 197476 . + 0 ID=cds-WP_003415144.1;Parent=gene-DKM08_RS19845;Dbxref=GenBank:WP_003415144.1;Name=WP_003415144.1;Ontology_term=GO:0009098,GO:0000287,GO:0003862,GO:0051287;gbkey=CDS;gene=leuB;go_function=magnesium ion binding|0000287||IEA,3-isopropylmalate dehydrogenase activity|0003862||IEA,NAD binding|0051287||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217511.1;locus_tag=DKM08_RS19845;product=3-isopropylmalate dehydrogenase;protein_id=WP_003415144.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 197610 198665 . - . ID=gene-DKM08_RS19850;Name=DKM08_RS19850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19850;old_locus_tag=DKM08_19830;partial=true;pseudo=true;start_range=.,197610 NZ_QFYX01000004.1 Protein Homology CDS 197610 198665 . - 0 ID=cds-DKM08_RS19850;Parent=gene-DKM08_RS19850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=DKM08_RS19850;partial=true;product=MFS transporter;pseudo=true;start_range=.,197610;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 198919 199716 . + . ID=gene-DKM08_RS19855;Name=DKM08_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19855;old_locus_tag=DKM08_19835 NZ_QFYX01000004.1 Protein Homology CDS 198919 199716 . + 0 ID=cds-WP_003415138.1;Parent=gene-DKM08_RS19855;Dbxref=GenBank:WP_003415138.1;Name=WP_003415138.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003415138.1;locus_tag=DKM08_RS19855;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003415138.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 199713 201185 . + . ID=gene-DKM08_RS19860;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=DKM08_RS19860;old_locus_tag=DKM08_19840 NZ_QFYX01000004.1 Protein Homology CDS 199713 201185 . + 0 ID=cds-WP_003415122.1;Parent=gene-DKM08_RS19860;Dbxref=GenBank:WP_003415122.1;Name=WP_003415122.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177915.1;locus_tag=DKM08_RS19860;product=glutamate--tRNA ligase;protein_id=WP_003415122.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 201260 201331 . + . ID=gene-DKM08_RS19865;Name=DKM08_RS19865;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS19865;old_locus_tag=DKM08_19845 NZ_QFYX01000004.1 tRNAscan-SE tRNA 201260 201331 . + . ID=rna-DKM08_RS19865;Parent=gene-DKM08_RS19865;anticodon=(pos:201293..201295);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS19865;product=tRNA-Gln NZ_QFYX01000004.1 tRNAscan-SE exon 201260 201331 . + . ID=exon-DKM08_RS19865-1;Parent=rna-DKM08_RS19865;anticodon=(pos:201293..201295);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS19865;product=tRNA-Gln NZ_QFYX01000004.1 RefSeq gene 201371 201443 . + . ID=gene-DKM08_RS19870;Name=DKM08_RS19870;gbkey=Gene;gene_biotype=tRNA;locus_tag=DKM08_RS19870;old_locus_tag=DKM08_19850 NZ_QFYX01000004.1 tRNAscan-SE tRNA 201371 201443 . + . ID=rna-DKM08_RS19870;Parent=gene-DKM08_RS19870;anticodon=(pos:201405..201407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS19870;product=tRNA-Glu NZ_QFYX01000004.1 tRNAscan-SE exon 201371 201443 . + . ID=exon-DKM08_RS19870-1;Parent=rna-DKM08_RS19870;anticodon=(pos:201405..201407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=DKM08_RS19870;product=tRNA-Glu NZ_QFYX01000004.1 RefSeq gene 201517 202008 . - . ID=gene-DKM08_RS19875;Name=DKM08_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19875;old_locus_tag=DKM08_19855 NZ_QFYX01000004.1 Protein Homology CDS 201517 202008 . - 0 ID=cds-WP_003415119.1;Parent=gene-DKM08_RS19875;Dbxref=GenBank:WP_003415119.1;Name=WP_003415119.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217507.1;locus_tag=DKM08_RS19875;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003415119.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 202271 203131 . + . ID=gene-DKM08_RS19880;Name=DKM08_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19880;old_locus_tag=DKM08_19860 NZ_QFYX01000004.1 Protein Homology CDS 202271 203131 . + 0 ID=cds-WP_010950809.1;Parent=gene-DKM08_RS19880;Dbxref=GenBank:WP_010950809.1;Name=WP_010950809.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217506.1;locus_tag=DKM08_RS19880;product=class I SAM-dependent methyltransferase;protein_id=WP_010950809.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 203142 203843 . - . ID=gene-DKM08_RS19885;Name=DKM08_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19885;old_locus_tag=DKM08_19865 NZ_QFYX01000004.1 Protein Homology CDS 203142 203843 . - 0 ID=cds-WP_003415115.1;Parent=gene-DKM08_RS19885;Dbxref=GenBank:WP_003415115.1;Name=WP_003415115.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217505.1;locus_tag=DKM08_RS19885;product=IclR family transcriptional regulator;protein_id=WP_003415115.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 203915 205336 . + . ID=gene-DKM08_RS19890;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=DKM08_RS19890;old_locus_tag=DKM08_19870 NZ_QFYX01000004.1 Protein Homology CDS 203915 205336 . + 0 ID=cds-WP_003415114.1;Parent=gene-DKM08_RS19890;Dbxref=GenBank:WP_003415114.1;Name=WP_003415114.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217504.1;locus_tag=DKM08_RS19890;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_003415114.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 205361 205957 . + . ID=gene-DKM08_RS19895;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=DKM08_RS19895;old_locus_tag=DKM08_19875 NZ_QFYX01000004.1 Protein Homology CDS 205361 205957 . + 0 ID=cds-WP_003415110.1;Parent=gene-DKM08_RS19895;Dbxref=GenBank:WP_003415110.1;Name=WP_003415110.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217503.1;locus_tag=DKM08_RS19895;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_003415110.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 206170 206787 . + . ID=gene-DKM08_RS19900;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=DKM08_RS19900;old_locus_tag=DKM08_19880 NZ_QFYX01000004.1 Protein Homology CDS 206170 206787 . + 0 ID=cds-WP_024742702.1;Parent=gene-DKM08_RS19900;Dbxref=GenBank:WP_024742702.1;Name=WP_024742702.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217502.1;locus_tag=DKM08_RS19900;product=DNA-binding protein HupB;protein_id=WP_024742702.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 206845 207798 . - . ID=gene-DKM08_RS19905;Name=DKM08_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19905;old_locus_tag=DKM08_19885 NZ_QFYX01000004.1 Protein Homology CDS 206845 207798 . - 0 ID=cds-WP_003899569.1;Parent=gene-DKM08_RS19905;Dbxref=GenBank:WP_003899569.1;Name=WP_003899569.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217501.1;locus_tag=DKM08_RS19905;product=NUDIX hydrolase;protein_id=WP_003899569.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 207881 210109 . - . ID=gene-DKM08_RS19910;Name=DKM08_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19910;old_locus_tag=DKM08_19890 NZ_QFYX01000004.1 Protein Homology CDS 207881 210109 . - 0 ID=cds-WP_003415097.1;Parent=gene-DKM08_RS19910;Dbxref=GenBank:WP_003415097.1;Name=WP_003415097.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217500.1;locus_tag=DKM08_RS19910;product=RNA degradosome polyphosphate kinase;protein_id=WP_003415097.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 210201 210845 . - . ID=gene-DKM08_RS19915;Name=cofC;gbkey=Gene;gene=cofC;gene_biotype=protein_coding;locus_tag=DKM08_RS19915;old_locus_tag=DKM08_19895 NZ_QFYX01000004.1 Protein Homology CDS 210201 210845 . - 0 ID=cds-WP_003415094.1;Parent=gene-DKM08_RS19915;Dbxref=GenBank:WP_003415094.1;Name=WP_003415094.1;Ontology_term=GO:0043814;gbkey=CDS;gene=cofC;go_function=phospholactate guanylyltransferase activity|0043814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217499.1;locus_tag=DKM08_RS19915;product=2-phospho-L-lactate guanylyltransferase;protein_id=WP_003415094.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 210964 211968 . + . ID=gene-DKM08_RS19920;Name=DKM08_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19920;old_locus_tag=DKM08_19900 NZ_QFYX01000004.1 Protein Homology CDS 210964 211968 . + 0 ID=cds-WP_003415091.1;Parent=gene-DKM08_RS19920;Dbxref=GenBank:WP_003415091.1;Name=WP_003415091.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217498.1;locus_tag=DKM08_RS19920;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003415091.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 212046 213167 . + . ID=gene-DKM08_RS19925;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=DKM08_RS19925;old_locus_tag=DKM08_19905 NZ_QFYX01000004.1 Protein Homology CDS 212046 213167 . + 0 ID=cds-WP_003415088.1;Parent=gene-DKM08_RS19925;Dbxref=GenBank:WP_003415088.1;Name=WP_003415088.1;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217497.1;locus_tag=DKM08_RS19925;product=D-alanine--D-alanine ligase DdlA;protein_id=WP_003415088.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 213340 213885 . - . ID=gene-DKM08_RS19930;Name=DKM08_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19930;old_locus_tag=DKM08_19910 NZ_QFYX01000004.1 Protein Homology CDS 213340 213885 . - 0 ID=cds-WP_003415041.1;Parent=gene-DKM08_RS19930;Dbxref=GenBank:WP_003415041.1;Name=WP_003415041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217496.1;locus_tag=DKM08_RS19930;product=DUF3515 domain-containing protein;protein_id=WP_003415041.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 214097 214681 . + . ID=gene-DKM08_RS19935;Name=DKM08_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19935;old_locus_tag=DKM08_19915 NZ_QFYX01000004.1 Protein Homology CDS 214097 214681 . + 0 ID=cds-WP_010950807.1;Parent=gene-DKM08_RS19935;Dbxref=GenBank:WP_010950807.1;Name=WP_010950807.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217495.1;locus_tag=DKM08_RS19935;product=IS607 family transposase;protein_id=WP_010950807.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 214681 216060 . + . ID=gene-DKM08_RS19940;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=DKM08_RS19940;old_locus_tag=DKM08_19920 NZ_QFYX01000004.1 Protein Homology CDS 214681 216060 . + 0 ID=cds-WP_003415037.1;Parent=gene-DKM08_RS19940;Dbxref=GenBank:WP_003415037.1;Name=WP_003415037.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=DKM08_RS19940;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003415037.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 216057 217058 . + . ID=gene-DKM08_RS19945;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=DKM08_RS19945;old_locus_tag=DKM08_19925 NZ_QFYX01000004.1 Protein Homology CDS 216057 217058 . + 0 ID=cds-WP_003415034.1;Parent=gene-DKM08_RS19945;Dbxref=GenBank:WP_003415034.1;Name=WP_003415034.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217493.1;locus_tag=DKM08_RS19945;product=thiamine-phosphate kinase;protein_id=WP_003415034.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 217091 217774 . + . ID=gene-DKM08_RS19950;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=DKM08_RS19950;old_locus_tag=DKM08_19930 NZ_QFYX01000004.1 Protein Homology CDS 217091 217774 . + 0 ID=cds-WP_003899565.1;Parent=gene-DKM08_RS19950;Dbxref=GenBank:WP_003899565.1;Name=WP_003899565.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217492.1;locus_tag=DKM08_RS19950;product=uracil-DNA glycosylase;protein_id=WP_003899565.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 217797 217991 . - . ID=gene-DKM08_RS19955;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DKM08_RS19955;old_locus_tag=DKM08_19935 NZ_QFYX01000004.1 Protein Homology CDS 217797 217991 . - 0 ID=cds-WP_003415030.1;Parent=gene-DKM08_RS19955;Dbxref=GenBank:WP_003415030.1;Name=WP_003415030.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030042.1;locus_tag=DKM08_RS19955;product=50S ribosomal protein L28;protein_id=WP_003415030.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 218233 219894 . + . ID=gene-DKM08_RS19965;Name=DKM08_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19965;old_locus_tag=DKM08_19945 NZ_QFYX01000004.1 Protein Homology CDS 218233 219894 . + 0 ID=cds-WP_003902383.1;Parent=gene-DKM08_RS19965;Dbxref=GenBank:WP_003902383.1;Name=WP_003902383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902383.1;locus_tag=DKM08_RS19965;product=DAK2 domain-containing protein;protein_id=WP_003902383.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 219897 222110 . + . ID=gene-DKM08_RS19970;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=DKM08_RS19970;old_locus_tag=DKM08_19950 NZ_QFYX01000004.1 Protein Homology CDS 219897 222110 . + 0 ID=cds-WP_003415026.1;Parent=gene-DKM08_RS19970;Dbxref=GenBank:WP_003415026.1;Name=WP_003415026.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217489.1;locus_tag=DKM08_RS19970;product=ATP-dependent DNA helicase RecG;protein_id=WP_003415026.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 222107 222808 . + . ID=gene-DKM08_RS19975;Name=DKM08_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19975;old_locus_tag=DKM08_19955 NZ_QFYX01000004.1 Protein Homology CDS 222107 222808 . + 0 ID=cds-WP_147020934.1;Parent=gene-DKM08_RS19975;Dbxref=GenBank:WP_147020934.1;Name=WP_147020934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217488.1;locus_tag=DKM08_RS19975;product=HNH endonuclease family protein;protein_id=WP_147020934.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 222882 223730 . - . ID=gene-DKM08_RS19980;Name=DKM08_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19980;old_locus_tag=DKM08_19960 NZ_QFYX01000004.1 Protein Homology CDS 222882 223730 . - 0 ID=cds-WP_003415022.1;Parent=gene-DKM08_RS19980;Dbxref=GenBank:WP_003415022.1;Name=WP_003415022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217487.1;locus_tag=DKM08_RS19980;product=aldo/keto reductase;protein_id=WP_003415022.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 223737 223930 . - . ID=gene-DKM08_RS19985;Name=DKM08_RS19985;end_range=223930,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS19985;old_locus_tag=DKM08_19965;partial=true;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 223737 223930 . - 0 ID=cds-DKM08_RS19985;Parent=gene-DKM08_RS19985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=223930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019735927.1;locus_tag=DKM08_RS19985;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 224128 225258 . + . ID=gene-DKM08_RS19990;Name=lipN;gbkey=Gene;gene=lipN;gene_biotype=protein_coding;locus_tag=DKM08_RS19990;old_locus_tag=DKM08_19970 NZ_QFYX01000004.1 Protein Homology CDS 224128 225258 . + 0 ID=cds-WP_003415015.1;Parent=gene-DKM08_RS19990;Dbxref=GenBank:WP_003415015.1;Name=WP_003415015.1;gbkey=CDS;gene=lipN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217486.1;locus_tag=DKM08_RS19990;product=lipase/esterase LipN;protein_id=WP_003415015.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 225355 226122 . + . ID=gene-DKM08_RS19995;Name=DKM08_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS19995;old_locus_tag=DKM08_19975 NZ_QFYX01000004.1 Protein Homology CDS 225355 226122 . + 0 ID=cds-WP_003415010.1;Parent=gene-DKM08_RS19995;Dbxref=GenBank:WP_003415010.1;Name=WP_003415010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217485.1;locus_tag=DKM08_RS19995;product=mycothiol-dependent reductase;protein_id=WP_003415010.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 226128 226760 . + . ID=gene-DKM08_RS20000;Name=DKM08_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20000;old_locus_tag=DKM08_19980 NZ_QFYX01000004.1 Protein Homology CDS 226128 226760 . + 0 ID=cds-WP_003415007.1;Parent=gene-DKM08_RS20000;Dbxref=GenBank:WP_003415007.1;Name=WP_003415007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217484.1;locus_tag=DKM08_RS20000;product=vitamin K epoxide reductase family protein;protein_id=WP_003415007.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 226785 230168 . + . ID=gene-DKM08_RS20005;Name=pca;gbkey=Gene;gene=pca;gene_biotype=protein_coding;locus_tag=DKM08_RS20005;old_locus_tag=DKM08_19985 NZ_QFYX01000004.1 Protein Homology CDS 226785 230168 . + 0 ID=cds-WP_003415003.1;Parent=gene-DKM08_RS20005;Dbxref=GenBank:WP_003415003.1;Name=WP_003415003.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;gene=pca;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217483.1;locus_tag=DKM08_RS20005;product=pyruvate carboxylase;protein_id=WP_003415003.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 230263 230365 . + . ID=gene-DKM08_RS22825;Name=DKM08_RS22825;end_range=230365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22825;partial=true;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 230263 230365 . + 0 ID=cds-DKM08_RS22825;Parent=gene-DKM08_RS22825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=230365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=DKM08_RS22825;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 230364 230930 . + . ID=gene-DKM08_RS20010;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=DKM08_RS20010;old_locus_tag=DKM08_19990 NZ_QFYX01000004.1 Protein Homology CDS 230364 230930 . + 0 ID=cds-WP_003415001.1;Parent=gene-DKM08_RS20010;Dbxref=GenBank:WP_003415001.1;Name=WP_003415001.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217482.1;locus_tag=DKM08_RS20010;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_003415001.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 231016 231501 . + . ID=gene-DKM08_RS20015;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=DKM08_RS20015;old_locus_tag=DKM08_19995 NZ_QFYX01000004.1 Protein Homology CDS 231016 231501 . + 0 ID=cds-WP_003414998.1;Parent=gene-DKM08_RS20015;Dbxref=GenBank:WP_003414998.1;Name=WP_003414998.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217481.1;locus_tag=DKM08_RS20015;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_003414998.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 231545 231730 . - . ID=gene-DKM08_RS20020;Name=DKM08_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20020;old_locus_tag=DKM08_20000 NZ_QFYX01000004.1 Protein Homology CDS 231545 231730 . - 0 ID=cds-WP_023349597.1;Parent=gene-DKM08_RS20020;Dbxref=GenBank:WP_023349597.1;Name=WP_023349597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414994.1;locus_tag=DKM08_RS20020;product=hypothetical protein;protein_id=WP_023349597.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 232052 232184 . - . ID=gene-DKM08_RS22340;Name=DKM08_RS22340;end_range=232184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22340;partial=true;pseudo=true;start_range=.,232052 NZ_QFYX01000004.1 Protein Homology CDS 232052 232184 . - 0 ID=cds-DKM08_RS22340;Parent=gene-DKM08_RS22340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=232184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=DKM08_RS22340;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,232052;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 232370 233302 . - . ID=gene-DKM08_RS20030;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=DKM08_RS20030;old_locus_tag=DKM08_20010 NZ_QFYX01000004.1 Protein Homology CDS 232370 233302 . - 0 ID=cds-WP_003899559.1;Parent=gene-DKM08_RS20030;Dbxref=GenBank:WP_003899559.1;Name=WP_003899559.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217480.1;locus_tag=DKM08_RS20030;product=formyltetrahydrofolate deformylase;protein_id=WP_003899559.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 233375 234595 . - . ID=gene-DKM08_RS20035;Name=DKM08_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20035;old_locus_tag=DKM08_20015 NZ_QFYX01000004.1 Protein Homology CDS 233375 234595 . - 0 ID=cds-WP_003414924.1;Parent=gene-DKM08_RS20035;Dbxref=GenBank:WP_003414924.1;Name=WP_003414924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217479.1;locus_tag=DKM08_RS20035;product=permease;protein_id=WP_003414924.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 234709 236058 . + . ID=gene-DKM08_RS20040;Name=DKM08_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20040;old_locus_tag=DKM08_20020 NZ_QFYX01000004.1 Protein Homology CDS 234709 236058 . + 0 ID=cds-WP_003414922.1;Parent=gene-DKM08_RS20040;Dbxref=GenBank:WP_003414922.1;Name=WP_003414922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217478.1;locus_tag=DKM08_RS20040;product=PGL/p-HBAD biosynthesis rhamnosyltransferase;protein_id=WP_003414922.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 236159 236632 . - . ID=gene-DKM08_RS20045;Name=DKM08_RS20045;end_range=236632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20045;old_locus_tag=DKM08_20025;partial=true;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 236159 236632 . - 0 ID=cds-DKM08_RS20045;Parent=gene-DKM08_RS20045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=236632,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=DKM08_RS20045;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 236597 236878 . + . ID=gene-DKM08_RS20050;Name=DKM08_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20050;old_locus_tag=DKM08_20030 NZ_QFYX01000004.1 Protein Homology CDS 236597 236878 . + 0 ID=cds-WP_147020936.1;Parent=gene-DKM08_RS20050;Dbxref=GenBank:WP_147020936.1;Name=WP_147020936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217476.1;locus_tag=DKM08_RS20050;product=hypothetical protein;protein_id=WP_147020936.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 236993 237730 . + . ID=gene-DKM08_RS20055;Name=DKM08_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20055;old_locus_tag=DKM08_20035 NZ_QFYX01000004.1 Protein Homology CDS 236993 237730 . + 0 ID=cds-WP_003414919.1;Parent=gene-DKM08_RS20055;Dbxref=GenBank:WP_003414919.1;Name=WP_003414919.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217475.1;locus_tag=DKM08_RS20055;product=rhamnosyl O-methyltransferase;protein_id=WP_003414919.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 237831 239118 . + . ID=gene-DKM08_RS20060;Name=DKM08_RS20060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20060;old_locus_tag=DKM08_20040;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 237831 239118 . + 0 ID=cds-DKM08_RS20060;Parent=gene-DKM08_RS20060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217474.1;locus_tag=DKM08_RS20060;product=PGL/p-HBAD biosynthesis glycosyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 239181 239387 . + . ID=gene-DKM08_RS20070;Name=DKM08_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20070;old_locus_tag=DKM08_20050 NZ_QFYX01000004.1 Protein Homology CDS 239181 239387 . + 0 ID=cds-WP_003901502.1;Parent=gene-DKM08_RS20070;Dbxref=GenBank:WP_003901502.1;Name=WP_003901502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939955.1;locus_tag=DKM08_RS20070;product=hypothetical protein;protein_id=WP_003901502.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 239535 240362 . - . ID=gene-DKM08_RS20075;Name=DKM08_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20075;old_locus_tag=DKM08_20055 NZ_QFYX01000004.1 Protein Homology CDS 239535 240362 . - 0 ID=cds-WP_003414909.1;Parent=gene-DKM08_RS20075;Dbxref=GenBank:WP_003414909.1;Name=WP_003414909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217473.1;locus_tag=DKM08_RS20075;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003414909.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 240433 241164 . - . ID=gene-DKM08_RS20080;Name=DKM08_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20080;old_locus_tag=DKM08_20060 NZ_QFYX01000004.1 Protein Homology CDS 240433 241164 . - 0 ID=cds-WP_003414908.1;Parent=gene-DKM08_RS20080;Dbxref=GenBank:WP_003414908.1;Name=WP_003414908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217472.1;locus_tag=DKM08_RS20080;product=[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase;protein_id=WP_003414908.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 241287 242252 . + . ID=gene-DKM08_RS20085;Name=DKM08_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20085;old_locus_tag=DKM08_20065 NZ_QFYX01000004.1 Protein Homology CDS 241287 242252 . + 0 ID=cds-WP_010950806.1;Parent=gene-DKM08_RS20085;Dbxref=GenBank:WP_010950806.1;Name=WP_010950806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217471.1;locus_tag=DKM08_RS20085;product=[2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 4'''-O-methyltransferase;protein_id=WP_010950806.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 242441 243166 . + . ID=gene-DKM08_RS20090;Name=DKM08_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20090;old_locus_tag=DKM08_20070 NZ_QFYX01000004.1 Protein Homology CDS 242441 243166 . + 0 ID=cds-WP_003414905.1;Parent=gene-DKM08_RS20090;Dbxref=GenBank:WP_003414905.1;Name=WP_003414905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217470.1;locus_tag=DKM08_RS20090;product=[2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 3'''-O-methyltransferase;protein_id=WP_003414905.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 243297 244553 . - . ID=gene-DKM08_RS20095;Name=DKM08_RS20095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20095;old_locus_tag=DKM08_20075;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 243297 244553 . - 0 ID=cds-DKM08_RS20095;Parent=gene-DKM08_RS20095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217469.1;locus_tag=DKM08_RS20095;product=trans-acting enoyl reductase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 244579 245391 . - . ID=gene-DKM08_RS20100;Name=DKM08_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20100;old_locus_tag=DKM08_20080 NZ_QFYX01000004.1 Protein Homology CDS 244579 245391 . - 0 ID=cds-WP_003414900.1;Parent=gene-DKM08_RS20100;Dbxref=GenBank:WP_003414900.1;Name=WP_003414900.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217468.1;locus_tag=DKM08_RS20100;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003414900.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 245584 246729 . + . ID=gene-DKM08_RS20105;Name=DKM08_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20105;old_locus_tag=DKM08_20085 NZ_QFYX01000004.1 Protein Homology CDS 245584 246729 . + 0 ID=cds-WP_003414891.1;Parent=gene-DKM08_RS20105;Dbxref=GenBank:WP_003414891.1;Name=WP_003414891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217467.1;locus_tag=DKM08_RS20105;product=phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase;protein_id=WP_003414891.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 247488 249236 . + . ID=gene-DKM08_RS20115;Name=fadD29;gbkey=Gene;gene=fadD29;gene_biotype=protein_coding;gene_synonym=faaL29;locus_tag=DKM08_RS20115;old_locus_tag=DKM08_20095 NZ_QFYX01000004.1 Protein Homology CDS 247488 249236 . + 0 ID=cds-WP_010950805.1;Parent=gene-DKM08_RS20115;Dbxref=GenBank:WP_010950805.1;Name=WP_010950805.1;gbkey=CDS;gene=fadD29;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950805.1;locus_tag=DKM08_RS20115;product=4-hydroxyphenylalkanoate adenylyltransferase FadD29;protein_id=WP_010950805.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 249262 249861 . + . ID=gene-DKM08_RS20120;Name=DKM08_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20120;old_locus_tag=DKM08_20100 NZ_QFYX01000004.1 Protein Homology CDS 249262 249861 . + 0 ID=cds-WP_003414887.1;Parent=gene-DKM08_RS20120;Dbxref=GenBank:WP_003414887.1;Name=WP_003414887.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217465.1;locus_tag=DKM08_RS20120;product=chorismate--pyruvate lyase family protein;protein_id=WP_003414887.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 249878 251995 . + . ID=gene-DKM08_RS20125;Name=DKM08_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20125;old_locus_tag=DKM08_20105 NZ_QFYX01000004.1 Protein Homology CDS 249878 251995 . + 0 ID=cds-WP_003414884.1;Parent=gene-DKM08_RS20125;Dbxref=GenBank:WP_003414884.1;Name=WP_003414884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217464.1;locus_tag=DKM08_RS20125;product=p-hydroxybenzoic acid--AMP ligase FadD22;protein_id=WP_003414884.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 252013 258330 . + . ID=gene-DKM08_RS20130;Name=DKM08_RS20130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20130;old_locus_tag=DKM08_20110;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 252013 258330 . + 0 ID=cds-DKM08_RS20130;Parent=gene-DKM08_RS20130;Note=internal stop;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910947.1;locus_tag=DKM08_RS20130;product=type I polyketide synthase;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 258679 259380 . + . ID=gene-DKM08_RS20140;Name=lppX;gbkey=Gene;gene=lppX;gene_biotype=protein_coding;locus_tag=DKM08_RS20140;old_locus_tag=DKM08_20120 NZ_QFYX01000004.1 Protein Homology CDS 258679 259380 . + 0 ID=cds-WP_003414872.1;Parent=gene-DKM08_RS20140;Dbxref=GenBank:WP_003414872.1;Name=WP_003414872.1;gbkey=CDS;gene=lppX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217461.1;locus_tag=DKM08_RS20140;product=LppX_LprAFG lipoprotein;protein_id=WP_003414872.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 259498 260299 . - . ID=gene-DKM08_RS20145;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=DKM08_RS20145;old_locus_tag=DKM08_20125;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 259498 260299 . - 0 ID=cds-DKM08_RS20145;Parent=gene-DKM08_RS20145;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_083047449.1;locus_tag=DKM08_RS20145;product=IS21-like element ISMbo1 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 260299 261540 . - . ID=gene-DKM08_RS20150;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=DKM08_RS20150;old_locus_tag=DKM08_20130 NZ_QFYX01000004.1 Protein Homology CDS 260299 261540 . - 0 ID=cds-WP_003414864.1;Parent=gene-DKM08_RS20150;Dbxref=GenBank:WP_003414864.1;Name=WP_003414864.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=DKM08_RS20150;product=IS21-like element ISMbo1 family transposase;protein_id=WP_003414864.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 262172 264934 . - . ID=gene-DKM08_RS20160;Name=mmpL7;gbkey=Gene;gene=mmpL7;gene_biotype=protein_coding;locus_tag=DKM08_RS20160;old_locus_tag=DKM08_20140 NZ_QFYX01000004.1 Protein Homology CDS 262172 264934 . - 0 ID=cds-WP_023349594.1;Parent=gene-DKM08_RS20160;Dbxref=GenBank:WP_023349594.1;Name=WP_023349594.1;gbkey=CDS;gene=mmpL7;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217458.1;locus_tag=DKM08_RS20160;product=phthiocerol dimycocerosate RND transporter MmpL7;protein_id=WP_023349594.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 264927 266669 . - . ID=gene-DKM08_RS20165;Name=fadD28;gbkey=Gene;gene=fadD28;gene_biotype=protein_coding;locus_tag=DKM08_RS20165;old_locus_tag=DKM08_20145 NZ_QFYX01000004.1 Protein Homology CDS 264927 266669 . - 0 ID=cds-WP_010950803.1;Parent=gene-DKM08_RS20165;Dbxref=GenBank:WP_010950803.1;Name=WP_010950803.1;gbkey=CDS;gene=fadD28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217457.1;locus_tag=DKM08_RS20165;product=fatty-acid--AMP ligase FAAL28/FadD28;protein_id=WP_010950803.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 267289 273624 . + . ID=gene-DKM08_RS20170;Name=mas;gbkey=Gene;gene=mas;gene_biotype=protein_coding;locus_tag=DKM08_RS20170;old_locus_tag=DKM08_20150 NZ_QFYX01000004.1 Protein Homology CDS 267289 273624 . + 0 ID=cds-WP_010950802.1;Parent=gene-DKM08_RS20170;Dbxref=GenBank:WP_010950802.1;Name=WP_010950802.1;gbkey=CDS;gene=mas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217456.1;locus_tag=DKM08_RS20170;product=mycocerosate synthase;protein_id=WP_010950802.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 273787 275055 . - . ID=gene-DKM08_RS20175;Name=DKM08_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20175;old_locus_tag=DKM08_20155 NZ_QFYX01000004.1 Protein Homology CDS 273787 275055 . - 0 ID=cds-WP_003414853.1;Parent=gene-DKM08_RS20175;Dbxref=GenBank:WP_003414853.1;Name=WP_003414853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217455.1;locus_tag=DKM08_RS20175;product=phthiocerol/phthiodiolone dimycocerosyl transferase;protein_id=WP_003414853.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 275102 275932 . - . ID=gene-DKM08_RS20180;Name=drrC;gbkey=Gene;gene=drrC;gene_biotype=protein_coding;locus_tag=DKM08_RS20180;old_locus_tag=DKM08_20160 NZ_QFYX01000004.1 Protein Homology CDS 275102 275932 . - 0 ID=cds-WP_003414851.1;Parent=gene-DKM08_RS20180;Dbxref=GenBank:WP_003414851.1;Name=WP_003414851.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=drrC;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217454.1;locus_tag=DKM08_RS20180;product=ABC transporter permease;protein_id=WP_003414851.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 275929 276798 . - . ID=gene-DKM08_RS20185;Name=drrB;gbkey=Gene;gene=drrB;gene_biotype=protein_coding;locus_tag=DKM08_RS20185;old_locus_tag=DKM08_20165 NZ_QFYX01000004.1 Protein Homology CDS 275929 276798 . - 0 ID=cds-WP_003414848.1;Parent=gene-DKM08_RS20185;Dbxref=GenBank:WP_003414848.1;Name=WP_003414848.1;gbkey=CDS;gene=drrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217453.1;locus_tag=DKM08_RS20185;product=daunorubicin ABC transporter permease DrrB;protein_id=WP_003414848.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 276795 277790 . - . ID=gene-DKM08_RS20190;Name=drrA;gbkey=Gene;gene=drrA;gene_biotype=protein_coding;locus_tag=DKM08_RS20190;old_locus_tag=DKM08_20170 NZ_QFYX01000004.1 Protein Homology CDS 276795 277790 . - 0 ID=cds-WP_003414846.1;Parent=gene-DKM08_RS20190;Dbxref=GenBank:WP_003414846.1;Name=WP_003414846.1;gbkey=CDS;gene=drrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217452.1;locus_tag=DKM08_RS20190;product=daunorubicin ABC transporter ATP-binding protein DrrA;protein_id=WP_003414846.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 277801 282267 . - . ID=gene-DKM08_RS20195;Name=ppsE;gbkey=Gene;gene=ppsE;gene_biotype=protein_coding;locus_tag=DKM08_RS20195;old_locus_tag=DKM08_20175 NZ_QFYX01000004.1 Protein Homology CDS 277801 282267 . - 0 ID=cds-WP_003904964.1;Parent=gene-DKM08_RS20195;Dbxref=GenBank:WP_003904964.1;Name=WP_003904964.1;gbkey=CDS;gene=ppsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217451.1;locus_tag=DKM08_RS20195;product=phthiocerol type I polyketide synthase PpsE;protein_id=WP_003904964.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 282273 287756 . - . ID=gene-DKM08_RS20200;Name=ppsD;gbkey=Gene;gene=ppsD;gene_biotype=protein_coding;locus_tag=DKM08_RS20200;old_locus_tag=DKM08_20180 NZ_QFYX01000004.1 Protein Homology CDS 282273 287756 . - 0 ID=cds-WP_010950801.1;Parent=gene-DKM08_RS20200;Dbxref=GenBank:WP_010950801.1;Name=WP_010950801.1;gbkey=CDS;gene=ppsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217450.1;locus_tag=DKM08_RS20200;product=phthiocerol type I polyketide synthase PpsD;protein_id=WP_010950801.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 287753 294319 . - . ID=gene-DKM08_RS20205;Name=ppsC;gbkey=Gene;gene=ppsC;gene_biotype=protein_coding;locus_tag=DKM08_RS20205;old_locus_tag=DKM08_20185 NZ_QFYX01000004.1 Protein Homology CDS 287753 294319 . - 0 ID=cds-WP_003414837.1;Parent=gene-DKM08_RS20205;Dbxref=GenBank:WP_003414837.1;Name=WP_003414837.1;gbkey=CDS;gene=ppsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217449.1;locus_tag=DKM08_RS20205;product=phthiocerol type I polyketide synthase PpsC;protein_id=WP_003414837.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 294316 298932 . - . ID=gene-DKM08_RS20210;Name=ppsB;gbkey=Gene;gene=ppsB;gene_biotype=protein_coding;locus_tag=DKM08_RS20210;old_locus_tag=DKM08_20190 NZ_QFYX01000004.1 Protein Homology CDS 294316 298932 . - 0 ID=cds-WP_003414835.1;Parent=gene-DKM08_RS20210;Dbxref=GenBank:WP_003414835.1;Name=WP_003414835.1;gbkey=CDS;gene=ppsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217448.1;locus_tag=DKM08_RS20210;product=phthiocerol type I polyketide synthase PpsB;protein_id=WP_003414835.1;transl_table=11 NZ_QFYX01000004.1 RefSeq pseudogene 298929 304560 . - . ID=gene-DKM08_RS22345;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=pseudogene;locus_tag=DKM08_RS22345;old_locus_tag=DKM08_20195;pseudo=true NZ_QFYX01000004.1 Protein Homology CDS 298929 304560 . - 0 ID=cds-DKM08_RS22345;Parent=gene-DKM08_RS22345;Note=frameshifted;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217447.1;locus_tag=DKM08_RS22345;product=phthiocerol type I polyketide synthase PpsA;pseudo=true;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 304557 306308 . - . ID=gene-DKM08_RS20220;Name=fadD26;gbkey=Gene;gene=fadD26;gene_biotype=protein_coding;gene_synonym=faaL26;locus_tag=DKM08_RS20220;old_locus_tag=DKM08_20200 NZ_QFYX01000004.1 Protein Homology CDS 304557 306308 . - 0 ID=cds-WP_003904960.1;Parent=gene-DKM08_RS20220;Dbxref=GenBank:WP_003904960.1;Name=WP_003904960.1;gbkey=CDS;gene=fadD26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217446.2;locus_tag=DKM08_RS20220;product=long-chain-fatty-acid--AMP ligase FAAL26/FadD26;protein_id=WP_003904960.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 306724 307035 . - . ID=gene-DKM08_RS20225;Name=DKM08_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20225;old_locus_tag=DKM08_20205 NZ_QFYX01000004.1 Protein Homology CDS 306724 307035 . - 0 ID=cds-WP_003900596.1;Parent=gene-DKM08_RS20225;Dbxref=GenBank:WP_003900596.1;Name=WP_003900596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217445.1;locus_tag=DKM08_RS20225;product=hypothetical protein;protein_id=WP_003900596.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 307022 307807 . - . ID=gene-DKM08_RS20230;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=DKM08_RS20230;old_locus_tag=DKM08_20210 NZ_QFYX01000004.1 Protein Homology CDS 307022 307807 . - 0 ID=cds-WP_003414828.1;Parent=gene-DKM08_RS20230;Dbxref=GenBank:WP_003414828.1;Name=WP_003414828.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217444.1;locus_tag=DKM08_RS20230;product=thioesterase TesA;protein_id=WP_003414828.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 308046 308783 . + . ID=gene-DKM08_RS20235;Name=sepIVA;gbkey=Gene;gene=sepIVA;gene_biotype=protein_coding;locus_tag=DKM08_RS20235;old_locus_tag=DKM08_20215 NZ_QFYX01000004.1 Protein Homology CDS 308046 308783 . + 0 ID=cds-WP_003414826.1;Parent=gene-DKM08_RS20235;Dbxref=GenBank:WP_003414826.1;Name=WP_003414826.1;gbkey=CDS;gene=sepIVA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217443.1;locus_tag=DKM08_RS20235;product=cell division protein SepIVA;protein_id=WP_003414826.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 308870 309457 . + . ID=gene-DKM08_RS20240;Name=DKM08_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20240;old_locus_tag=DKM08_20220 NZ_QFYX01000004.1 Protein Homology CDS 308870 309457 . + 0 ID=cds-WP_003912009.1;Parent=gene-DKM08_RS20240;Dbxref=GenBank:WP_003912009.1;Name=WP_003912009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912009.1;locus_tag=DKM08_RS20240;product=YceD family protein;protein_id=WP_003912009.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 309454 310176 . + . ID=gene-DKM08_RS20245;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=DKM08_RS20245;old_locus_tag=DKM08_20225 NZ_QFYX01000004.1 Protein Homology CDS 309454 310176 . + 0 ID=cds-WP_003414820.1;Parent=gene-DKM08_RS20245;Dbxref=GenBank:WP_003414820.1;Name=WP_003414820.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217441.1;locus_tag=DKM08_RS20245;product=ribonuclease III;protein_id=WP_003414820.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 310480 311349 . + . ID=gene-DKM08_RS20260;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=DKM08_RS20260;old_locus_tag=DKM08_20240 NZ_QFYX01000004.1 Protein Homology CDS 310480 311349 . + 0 ID=cds-WP_003414814.1;Parent=gene-DKM08_RS20260;Dbxref=GenBank:WP_003414814.1;Name=WP_003414814.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217440.1;locus_tag=DKM08_RS20260;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_003414814.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 311451 311864 . + . ID=gene-DKM08_RS20265;Name=DKM08_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20265;old_locus_tag=DKM08_20245 NZ_QFYX01000004.1 Protein Homology CDS 311451 311864 . + 0 ID=cds-WP_003414812.1;Parent=gene-DKM08_RS20265;Dbxref=GenBank:WP_003414812.1;Name=WP_003414812.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217439.1;locus_tag=DKM08_RS20265;product=OsmC family protein;protein_id=WP_003414812.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 311851 312132 . + . ID=gene-DKM08_RS20270;Name=acyP;gbkey=Gene;gene=acyP;gene_biotype=protein_coding;locus_tag=DKM08_RS20270;old_locus_tag=DKM08_20250 NZ_QFYX01000004.1 Protein Homology CDS 311851 312132 . + 0 ID=cds-WP_003414811.1;Parent=gene-DKM08_RS20270;Dbxref=GenBank:WP_003414811.1;Name=WP_003414811.1;Ontology_term=GO:0003998;gbkey=CDS;gene=acyP;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177679.1;locus_tag=DKM08_RS20270;product=acylphosphatase;protein_id=WP_003414811.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 312144 315761 . + . ID=gene-DKM08_RS20275;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=DKM08_RS20275;old_locus_tag=DKM08_20255 NZ_QFYX01000004.1 Protein Homology CDS 312144 315761 . + 0 ID=cds-WP_010950799.1;Parent=gene-DKM08_RS20275;Dbxref=GenBank:WP_010950799.1;Name=WP_010950799.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217438.2;locus_tag=DKM08_RS20275;product=chromosome segregation protein SMC;protein_id=WP_010950799.1;transl_table=11 NZ_QFYX01000004.1 RefSeq gene 315811 317079 . + . ID=gene-DKM08_RS20280;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=DKM08_RS20280;old_locus_tag=DKM08_20260 NZ_QFYX01000004.1 Protein Homology CDS 315811 317079 . + 0 ID=cds-WP_003899541.1;Parent=gene-DKM08_RS20280;Dbxref=GenBank:WP_003899541.1;Name=WP_003899541.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217437.1;locus_tag=DKM08_RS20280;product=signal recognition particle-docking protein FtsY;protein_id=WP_003899541.1;transl_table=11 ##sequence-region NZ_QFYX01000005.1 1 229095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000005.1 RefSeq region 1 229095 . + . ID=NZ_QFYX01000005.1:1..229095;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000005.1 RefSeq gene 321 1712 . + . ID=gene-DKM08_RS20290;Name=DKM08_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20290;old_locus_tag=DKM08_20270 NZ_QFYX01000005.1 Protein Homology CDS 321 1712 . + 0 ID=cds-WP_010950340.1;Parent=gene-DKM08_RS20290;Dbxref=GenBank:WP_010950340.1;Name=WP_010950340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177690.1;locus_tag=DKM08_RS20290;product=PPE family protein;protein_id=WP_010950340.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 1731 2600 . + . ID=gene-DKM08_RS20295;Name=scoE;gbkey=Gene;gene=scoE;gene_biotype=protein_coding;locus_tag=DKM08_RS20295;old_locus_tag=DKM08_20275 NZ_QFYX01000005.1 Protein Homology CDS 1731 2600 . + 0 ID=cds-WP_003400786.1;Parent=gene-DKM08_RS20295;Dbxref=GenBank:WP_003400786.1;Name=WP_003400786.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;gene=scoE;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214611.1;locus_tag=DKM08_RS20295;product=(3R)-3-[(carboxymethyl)amino]fatty acid oxygenase/decarboxylase;protein_id=WP_003400786.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 2597 3148 . + . ID=gene-DKM08_RS20300;Name=fcoT;gbkey=Gene;gene=fcoT;gene_biotype=protein_coding;locus_tag=DKM08_RS20300;old_locus_tag=DKM08_20280 NZ_QFYX01000005.1 Protein Homology CDS 2597 3148 . + 0 ID=cds-WP_003899810.1;Parent=gene-DKM08_RS20300;Dbxref=GenBank:WP_003899810.1;Name=WP_003899810.1;gbkey=CDS;gene=fcoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214612.1;locus_tag=DKM08_RS20300;product=fatty acyl CoA thioesterase FcoT;protein_id=WP_003899810.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 3177 4775 . + . ID=gene-DKM08_RS20305;Name=fadD10;gbkey=Gene;gene=fadD10;gene_biotype=protein_coding;locus_tag=DKM08_RS20305;old_locus_tag=DKM08_20285 NZ_QFYX01000005.1 Protein Homology CDS 3177 4775 . + 0 ID=cds-WP_003916215.1;Parent=gene-DKM08_RS20305;Dbxref=GenBank:WP_003916215.1;Name=WP_003916215.1;gbkey=CDS;gene=fadD10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916215.1;locus_tag=DKM08_RS20305;product=fatty acid--CoA ligase FadD10;protein_id=WP_003916215.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 4780 5016 . + . ID=gene-DKM08_RS20310;Name=DKM08_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20310;old_locus_tag=DKM08_20290 NZ_QFYX01000005.1 Protein Homology CDS 4780 5016 . + 0 ID=cds-WP_003400793.1;Parent=gene-DKM08_RS20310;Dbxref=GenBank:WP_003400793.1;Name=WP_003400793.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214614.1;locus_tag=DKM08_RS20310;product=acyl carrier protein;protein_id=WP_003400793.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 4998 12536 . + . ID=gene-DKM08_RS20315;Name=nrp;gbkey=Gene;gene=nrp;gene_biotype=protein_coding;locus_tag=DKM08_RS20315;old_locus_tag=DKM08_20295 NZ_QFYX01000005.1 Protein Homology CDS 4998 12536 . + 0 ID=cds-WP_003400794.1;Parent=gene-DKM08_RS20315;Dbxref=GenBank:WP_003400794.1;Name=WP_003400794.1;Ontology_term=GO:1904091;gbkey=CDS;gene=nrp;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214615.1;locus_tag=DKM08_RS20315;product=non-ribosomal peptide synthetase Nrp;protein_id=WP_003400794.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 12711 14696 . + . ID=gene-DKM08_RS20320;Name=DKM08_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20320;old_locus_tag=DKM08_20300 NZ_QFYX01000005.1 Protein Homology CDS 12711 14696 . + 0 ID=cds-WP_003900808.1;Parent=gene-DKM08_RS20320;Dbxref=GenBank:WP_003900808.1;Name=WP_003900808.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214616.1;locus_tag=DKM08_RS20320;product=cytochrome c oxidase assembly protein;protein_id=WP_003900808.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 14912 17170 . - . ID=gene-DKM08_RS20325;Name=ctpB;gbkey=Gene;gene=ctpB;gene_biotype=protein_coding;locus_tag=DKM08_RS20325;old_locus_tag=DKM08_20305 NZ_QFYX01000005.1 Protein Homology CDS 14912 17170 . - 0 ID=cds-WP_003400797.1;Parent=gene-DKM08_RS20325;Dbxref=GenBank:WP_003400797.1;Name=WP_003400797.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214617.1;locus_tag=DKM08_RS20325;product=heavy metal translocating P-type ATPase;protein_id=WP_003400797.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 17314 18828 . + . ID=gene-DKM08_RS20330;Name=DKM08_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20330;old_locus_tag=DKM08_20310 NZ_QFYX01000005.1 Protein Homology CDS 17314 18828 . + 0 ID=cds-WP_010950341.1;Parent=gene-DKM08_RS20330;Dbxref=GenBank:WP_010950341.1;Name=WP_010950341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214618.1;locus_tag=DKM08_RS20330;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_010950341.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 18862 18967 . - . ID=gene-DKM08_RS20335;Name=DKM08_RS20335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20335;old_locus_tag=DKM08_20315;partial=true;pseudo=true;start_range=.,18862 NZ_QFYX01000005.1 Protein Homology CDS 18862 18967 . - 0 ID=cds-DKM08_RS20335;Parent=gene-DKM08_RS20335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=DKM08_RS20335;partial=true;product=50S ribosomal protein L33;pseudo=true;start_range=.,18862;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 18977 19261 . - . ID=gene-DKM08_RS20340;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DKM08_RS20340;old_locus_tag=DKM08_20320 NZ_QFYX01000005.1 Protein Homology CDS 18977 19261 . - 0 ID=cds-WP_003400802.1;Parent=gene-DKM08_RS20340;Dbxref=GenBank:WP_003400802.1;Name=WP_003400802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177691.1;locus_tag=DKM08_RS20340;product=50S ribosomal protein L28;protein_id=WP_003400802.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 19371 20567 . + . ID=gene-DKM08_RS20345;Name=mrf;gbkey=Gene;gene=mrf;gene_biotype=protein_coding;locus_tag=DKM08_RS20345;old_locus_tag=DKM08_20325 NZ_QFYX01000005.1 Protein Homology CDS 19371 20567 . + 0 ID=cds-WP_003400804.1;Parent=gene-DKM08_RS20345;Dbxref=GenBank:WP_003400804.1;Name=WP_003400804.1;gbkey=CDS;gene=mrf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214620.1;locus_tag=DKM08_RS20345;product=ribosome hibernation factor-recruiting GTPase MRF;protein_id=WP_003400804.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 20662 25539 . - . ID=gene-DKM08_RS20350;Name=ctpI;gbkey=Gene;gene=ctpI;gene_biotype=protein_coding;locus_tag=DKM08_RS20350;old_locus_tag=DKM08_20330 NZ_QFYX01000005.1 Protein Homology CDS 20662 25539 . - 0 ID=cds-WP_010950342.1;Parent=gene-DKM08_RS20350;Dbxref=GenBank:WP_010950342.1;Name=WP_010950342.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpI;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400807.1;locus_tag=DKM08_RS20350;product=cation-translocating P-type ATPase;protein_id=WP_010950342.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 25893 26126 . - . ID=gene-DKM08_RS20355;Name=DKM08_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20355;old_locus_tag=DKM08_20335 NZ_QFYX01000005.1 Protein Homology CDS 25893 26126 . - 0 ID=cds-WP_003899816.1;Parent=gene-DKM08_RS20355;Dbxref=GenBank:WP_003899816.1;Name=WP_003899816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354093.1;locus_tag=DKM08_RS20355;product=hypothetical protein;protein_id=WP_003899816.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 26381 27871 . + . ID=gene-DKM08_RS20360;Name=DKM08_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20360;old_locus_tag=DKM08_20340 NZ_QFYX01000005.1 Protein Homology CDS 26381 27871 . + 0 ID=cds-WP_003909149.1;Parent=gene-DKM08_RS20360;Dbxref=GenBank:WP_003909149.1;Name=WP_003909149.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177692.1;locus_tag=DKM08_RS20360;product=PE family protein;protein_id=WP_003909149.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 27914 28768 . + . ID=gene-DKM08_RS20365;Name=DKM08_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20365;old_locus_tag=DKM08_20345 NZ_QFYX01000005.1 Protein Homology CDS 27914 28768 . + 0 ID=cds-WP_003899818.1;Parent=gene-DKM08_RS20365;Dbxref=GenBank:WP_003899818.1;Name=WP_003899818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899818.1;locus_tag=DKM08_RS20365;product=rhomboid family intramembrane serine protease;protein_id=WP_003899818.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 28949 31006 . + . ID=gene-DKM08_RS20370;Name=DKM08_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20370;old_locus_tag=DKM08_20350 NZ_QFYX01000005.1 Protein Homology CDS 28949 31006 . + 0 ID=cds-WP_003900811.1;Parent=gene-DKM08_RS20370;Dbxref=GenBank:WP_003900811.1;Name=WP_003900811.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214625.1;locus_tag=DKM08_RS20370;product=acyltransferase family protein;protein_id=WP_003900811.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 31288 32244 . + . ID=gene-DKM08_RS20375;Name=gca;gbkey=Gene;gene=gca;gene_biotype=protein_coding;locus_tag=DKM08_RS20375;old_locus_tag=DKM08_20355 NZ_QFYX01000005.1 Protein Homology CDS 31288 32244 . + 0 ID=cds-WP_003400829.1;Parent=gene-DKM08_RS20375;Dbxref=GenBank:WP_003400829.1;Name=WP_003400829.1;gbkey=CDS;gene=gca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214626.1;locus_tag=DKM08_RS20375;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003400829.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 32318 32908 . + . ID=gene-DKM08_RS20380;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=DKM08_RS20380;old_locus_tag=DKM08_20360 NZ_QFYX01000005.1 Protein Homology CDS 32318 32908 . + 0 ID=cds-WP_003400839.1;Parent=gene-DKM08_RS20380;Dbxref=GenBank:WP_003400839.1;Name=WP_003400839.1;gbkey=CDS;gene=gmhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214627.1;locus_tag=DKM08_RS20380;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_003400839.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 32940 33512 . + . ID=gene-DKM08_RS20385;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=DKM08_RS20385;old_locus_tag=DKM08_20365 NZ_QFYX01000005.1 Protein Homology CDS 32940 33512 . + 0 ID=cds-WP_010950343.1;Parent=gene-DKM08_RS20385;Dbxref=GenBank:WP_010950343.1;Name=WP_010950343.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214628.1;locus_tag=DKM08_RS20385;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_010950343.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 33512 34673 . + . ID=gene-DKM08_RS20390;Name=hddA;gbkey=Gene;gene=hddA;gene_biotype=pseudogene;locus_tag=DKM08_RS20390;old_locus_tag=DKM08_20370;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 33512 34673 . + 0 ID=cds-DKM08_RS20390;Parent=gene-DKM08_RS20390;Note=frameshifted;gbkey=CDS;gene=hddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214629.1;locus_tag=DKM08_RS20390;product=D-alpha-D-heptose-7-phosphate kinase HddA;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 34956 35144 . + . ID=gene-DKM08_RS20395;Name=DKM08_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20395;old_locus_tag=DKM08_20375 NZ_QFYX01000005.1 Protein Homology CDS 34956 35144 . + 0 ID=cds-WP_003400850.1;Parent=gene-DKM08_RS20395;Dbxref=GenBank:WP_003400850.1;Name=WP_003400850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030027.1;locus_tag=DKM08_RS20395;product=hypothetical protein;protein_id=WP_003400850.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 35267 36022 . - . ID=gene-DKM08_RS20400;Name=ldtMt1;gbkey=Gene;gene=ldtMt1;gene_biotype=protein_coding;locus_tag=DKM08_RS20400;old_locus_tag=DKM08_20380 NZ_QFYX01000005.1 Protein Homology CDS 35267 36022 . - 0 ID=cds-WP_003400856.1;Parent=gene-DKM08_RS20400;Dbxref=GenBank:WP_003400856.1;Name=WP_003400856.1;gbkey=CDS;gene=ldtMt1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214630.1;locus_tag=DKM08_RS20400;product=L%2CD-transpeptidase LdtMt1;protein_id=WP_003400856.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 36200 37144 . + . ID=gene-DKM08_RS20405;Name=oxyS;gbkey=Gene;gene=oxyS;gene_biotype=protein_coding;locus_tag=DKM08_RS20405;old_locus_tag=DKM08_20385 NZ_QFYX01000005.1 Protein Homology CDS 36200 37144 . + 0 ID=cds-WP_003400857.1;Parent=gene-DKM08_RS20405;Dbxref=GenBank:WP_003400857.1;Name=WP_003400857.1;gbkey=CDS;gene=oxyS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214631.1;locus_tag=DKM08_RS20405;product=LysR family transcriptional regulator OxyS;protein_id=WP_003400857.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 37128 38876 . - . ID=gene-DKM08_RS20410;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=DKM08_RS20410;old_locus_tag=DKM08_20390 NZ_QFYX01000005.1 Protein Homology CDS 37128 38876 . - 0 ID=cds-WP_003400858.1;Parent=gene-DKM08_RS20410;Dbxref=GenBank:WP_003400858.1;Name=WP_003400858.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214632.1;locus_tag=DKM08_RS20410;product=oxalyl-CoA decarboxylase;protein_id=WP_003400858.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 39049 40626 . + . ID=gene-DKM08_RS20415;Name=DKM08_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20415;old_locus_tag=DKM08_20395 NZ_QFYX01000005.1 Protein Homology CDS 39049 40626 . + 0 ID=cds-WP_003901806.1;Parent=gene-DKM08_RS20415;Dbxref=GenBank:WP_003901806.1;Name=WP_003901806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214633.1;locus_tag=DKM08_RS20415;product=FadD7 family fatty acid--CoA ligase;protein_id=WP_003901806.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 40627 42771 . - . ID=gene-DKM08_RS20420;Name=DKM08_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20420;old_locus_tag=DKM08_20400 NZ_QFYX01000005.1 Protein Homology CDS 40627 42771 . - 0 ID=cds-WP_011799076.1;Parent=gene-DKM08_RS20420;Dbxref=GenBank:WP_011799076.1;Name=WP_011799076.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214634.1;locus_tag=DKM08_RS20420;product=elongation factor G-like protein EF-G2;protein_id=WP_011799076.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 42907 43341 . - . ID=gene-DKM08_RS20425;Name=DKM08_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20425;old_locus_tag=DKM08_20405 NZ_QFYX01000005.1 Protein Homology CDS 42907 43341 . - 0 ID=cds-WP_003400864.1;Parent=gene-DKM08_RS20425;Dbxref=GenBank:WP_003400864.1;Name=WP_003400864.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214635.1;locus_tag=DKM08_RS20425;product=TIGR03668 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003400864.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 43490 43858 . + . ID=gene-DKM08_RS20430;Name=DKM08_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20430;old_locus_tag=DKM08_20410 NZ_QFYX01000005.1 Protein Homology CDS 43490 43858 . + 0 ID=cds-WP_003400865.1;Parent=gene-DKM08_RS20430;Dbxref=GenBank:WP_003400865.1;Name=WP_003400865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214636.1;locus_tag=DKM08_RS20430;product=hypothetical protein;protein_id=WP_003400865.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 43855 44223 . + . ID=gene-DKM08_RS20435;Name=DKM08_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20435;old_locus_tag=DKM08_20415 NZ_QFYX01000005.1 Protein Homology CDS 43855 44223 . + 0 ID=cds-WP_003400878.1;Parent=gene-DKM08_RS20435;Dbxref=GenBank:WP_003400878.1;Name=WP_003400878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214637.1;locus_tag=DKM08_RS20435;product=hypothetical protein;protein_id=WP_003400878.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 44532 46147 . + . ID=gene-DKM08_RS20440;Name=DKM08_RS20440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20440;old_locus_tag=DKM08_20420;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 44532 46147 . + 0 ID=cds-DKM08_RS20440;Parent=gene-DKM08_RS20440;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288800.1;locus_tag=DKM08_RS20440;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 46299 47366 . + . ID=gene-DKM08_RS20445;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=DKM08_RS20445;old_locus_tag=DKM08_20425 NZ_QFYX01000005.1 Protein Homology CDS 46299 47366 . + 0 ID=cds-WP_003400885.1;Parent=gene-DKM08_RS20445;Dbxref=GenBank:WP_003400885.1;Name=WP_003400885.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=pepA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214639.1;locus_tag=DKM08_RS20445;product=S1C family serine protease;protein_id=WP_003400885.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 47475 49280 . + . ID=gene-DKM08_RS20450;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=DKM08_RS20450;old_locus_tag=DKM08_20430 NZ_QFYX01000005.1 Protein Homology CDS 47475 49280 . + 0 ID=cds-WP_003400893.1;Parent=gene-DKM08_RS20450;Dbxref=GenBank:WP_003400893.1;Name=WP_003400893.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214640.1;locus_tag=DKM08_RS20450;product=maltose alpha-D-glucosyltransferase;protein_id=WP_003400893.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 49383 50750 . + . ID=gene-DKM08_RS20460;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=DKM08_RS20460;old_locus_tag=DKM08_20440 NZ_QFYX01000005.1 Protein Homology CDS 49383 50750 . + 0 ID=cds-WP_003899824.1;Parent=gene-DKM08_RS20460;Dbxref=GenBank:WP_003899824.1;Name=WP_003899824.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214641.1;locus_tag=DKM08_RS20460;product=maltokinase;protein_id=WP_003899824.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 50818 51597 . + . ID=gene-DKM08_RS20465;Name=DKM08_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20465;old_locus_tag=DKM08_20445 NZ_QFYX01000005.1 Protein Homology CDS 50818 51597 . + 0 ID=cds-WP_003899825.1;Parent=gene-DKM08_RS20465;Dbxref=GenBank:WP_003899825.1;Name=WP_003899825.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214642.1;locus_tag=DKM08_RS20465;product=YoaK family protein;protein_id=WP_003899825.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 51729 52751 . - . ID=gene-DKM08_RS20470;Name=ag85C;gbkey=Gene;gene=ag85C;gene_biotype=protein_coding;gene_synonym=fbpC;locus_tag=DKM08_RS20470;old_locus_tag=DKM08_20450 NZ_QFYX01000005.1 Protein Homology CDS 51729 52751 . - 0 ID=cds-WP_003400908.1;Parent=gene-DKM08_RS20470;Dbxref=GenBank:WP_003400908.1;Name=WP_003400908.1;gbkey=CDS;gene=ag85C;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177694.1;locus_tag=DKM08_RS20470;product=diacylglycerol acyltransferase/mycolyltransferase Ag85C;protein_id=WP_003400908.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 52998 53453 . + . ID=gene-DKM08_RS20475;Name=htdZ;gbkey=Gene;gene=htdZ;gene_biotype=protein_coding;locus_tag=DKM08_RS20475;old_locus_tag=DKM08_20455 NZ_QFYX01000005.1 Protein Homology CDS 52998 53453 . + 0 ID=cds-WP_003400912.1;Parent=gene-DKM08_RS20475;Dbxref=GenBank:WP_003400912.1;Name=WP_003400912.1;gbkey=CDS;gene=htdZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214644.1;locus_tag=DKM08_RS20475;product=3-hydroxyacyl-thioester dehydratase HtdZ;protein_id=WP_003400912.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 53466 54809 . - . ID=gene-DKM08_RS20480;Name=DKM08_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20480;old_locus_tag=DKM08_20460 NZ_QFYX01000005.1 Protein Homology CDS 53466 54809 . - 0 ID=cds-WP_003400917.1;Parent=gene-DKM08_RS20480;Dbxref=GenBank:WP_003400917.1;Name=WP_003400917.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020731414.1;locus_tag=DKM08_RS20480;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003400917.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 54851 55933 . - . ID=gene-DKM08_RS20485;Name=DKM08_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20485;old_locus_tag=DKM08_20465 NZ_QFYX01000005.1 Protein Homology CDS 54851 55933 . - 0 ID=cds-WP_003899826.1;Parent=gene-DKM08_RS20485;Dbxref=GenBank:WP_003899826.1;Name=WP_003899826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214646.1;locus_tag=DKM08_RS20485;product=F420-dependent hydroxymycolic acid dehydrogenase;protein_id=WP_003899826.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 56020 56625 . + . ID=gene-DKM08_RS20490;Name=DKM08_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20490;old_locus_tag=DKM08_20470 NZ_QFYX01000005.1 Protein Homology CDS 56020 56625 . + 0 ID=cds-WP_010950348.1;Parent=gene-DKM08_RS20490;Dbxref=GenBank:WP_010950348.1;Name=WP_010950348.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214647.1;locus_tag=DKM08_RS20490;product=GNAT family N-acetyltransferase;protein_id=WP_010950348.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 56922 57823 . + . ID=gene-DKM08_RS20495;Name=ephF;gbkey=Gene;gene=ephF;gene_biotype=pseudogene;locus_tag=DKM08_RS20495;old_locus_tag=DKM08_20475;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 56922 57823 . + 0 ID=cds-DKM08_RS20495;Parent=gene-DKM08_RS20495;Note=frameshifted;gbkey=CDS;gene=ephF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214648.1;locus_tag=DKM08_RS20495;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 57794 58399 . - . ID=gene-DKM08_RS20500;Name=DKM08_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20500;old_locus_tag=DKM08_20480 NZ_QFYX01000005.1 Protein Homology CDS 57794 58399 . - 0 ID=cds-WP_003400935.1;Parent=gene-DKM08_RS20500;Dbxref=GenBank:WP_003400935.1;Name=WP_003400935.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214649.1;locus_tag=DKM08_RS20500;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400935.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 58516 59841 . + . ID=gene-DKM08_RS20505;Name=DKM08_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20505;old_locus_tag=DKM08_20485 NZ_QFYX01000005.1 Protein Homology CDS 58516 59841 . + 0 ID=cds-WP_003400938.1;Parent=gene-DKM08_RS20505;Dbxref=GenBank:WP_003400938.1;Name=WP_003400938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214650.1;locus_tag=DKM08_RS20505;product=cytochrome P450;protein_id=WP_003400938.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 59862 60410 . - . ID=gene-DKM08_RS20510;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=DKM08_RS20510;old_locus_tag=DKM08_20490 NZ_QFYX01000005.1 Protein Homology CDS 59862 60410 . - 0 ID=cds-WP_003400942.1;Parent=gene-DKM08_RS20510;Dbxref=GenBank:WP_003400942.1;Name=WP_003400942.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214651.1;locus_tag=DKM08_RS20510;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_003400942.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 60473 60976 . + . ID=gene-DKM08_RS20515;Name=DKM08_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20515;old_locus_tag=DKM08_20495 NZ_QFYX01000005.1 Protein Homology CDS 60473 60976 . + 0 ID=cds-WP_003400945.1;Parent=gene-DKM08_RS20515;Dbxref=GenBank:WP_003400945.1;Name=WP_003400945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214652.1;locus_tag=DKM08_RS20515;product=nuclear transport factor 2 family protein;protein_id=WP_003400945.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 60977 61999 . + . ID=gene-DKM08_RS20520;Name=DKM08_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20520;old_locus_tag=DKM08_20500 NZ_QFYX01000005.1 Protein Homology CDS 60977 61999 . + 0 ID=cds-WP_003400947.1;Parent=gene-DKM08_RS20520;Dbxref=GenBank:WP_003400947.1;Name=WP_003400947.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214653.1;locus_tag=DKM08_RS20520;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003400947.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 62060 62440 . + . ID=gene-DKM08_RS20525;Name=DKM08_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20525;old_locus_tag=DKM08_20505 NZ_QFYX01000005.1 Protein Homology CDS 62060 62440 . + 0 ID=cds-WP_003400949.1;Parent=gene-DKM08_RS20525;Dbxref=GenBank:WP_003400949.1;Name=WP_003400949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214654.1;locus_tag=DKM08_RS20525;product=DUF427 domain-containing protein;protein_id=WP_003400949.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 62421 62831 . - . ID=gene-DKM08_RS20530;Name=DKM08_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20530;old_locus_tag=DKM08_20510 NZ_QFYX01000005.1 Protein Homology CDS 62421 62831 . - 0 ID=cds-WP_003400951.1;Parent=gene-DKM08_RS20530;Dbxref=GenBank:WP_003400951.1;Name=WP_003400951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214655.1;locus_tag=DKM08_RS20530;product=nuclear transport factor 2 family protein;protein_id=WP_003400951.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 62861 63787 . + . ID=gene-DKM08_RS20535;Name=DKM08_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20535;old_locus_tag=DKM08_20515 NZ_QFYX01000005.1 Protein Homology CDS 62861 63787 . + 0 ID=cds-WP_003400956.1;Parent=gene-DKM08_RS20535;Dbxref=GenBank:WP_003400956.1;Name=WP_003400956.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214656.1;locus_tag=DKM08_RS20535;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_003400956.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 63854 65332 . - . ID=gene-DKM08_RS20540;Name=DKM08_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20540;old_locus_tag=DKM08_20520 NZ_QFYX01000005.1 Protein Homology CDS 63854 65332 . - 0 ID=cds-WP_003400958.1;Parent=gene-DKM08_RS20540;Dbxref=GenBank:WP_003400958.1;Name=WP_003400958.1;Ontology_term=GO:0005247,GO:0034707;gbkey=CDS;go_component=chloride channel complex|0034707||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214657.1;locus_tag=DKM08_RS20540;product=chloride channel protein;protein_id=WP_003400958.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 65641 66276 . + . ID=gene-DKM08_RS20545;Name=DKM08_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20545;old_locus_tag=DKM08_20525 NZ_QFYX01000005.1 Protein Homology CDS 65641 66276 . + 0 ID=cds-WP_003911117.1;Parent=gene-DKM08_RS20545;Dbxref=GenBank:WP_003911117.1;Name=WP_003911117.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911117.1;locus_tag=DKM08_RS20545;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003911117.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 66365 67318 . + . ID=gene-DKM08_RS20550;Name=DKM08_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20550;old_locus_tag=DKM08_20530 NZ_QFYX01000005.1 Protein Homology CDS 66365 67318 . + 0 ID=cds-WP_003899829.1;Parent=gene-DKM08_RS20550;Dbxref=GenBank:WP_003899829.1;Name=WP_003899829.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214659.1;locus_tag=DKM08_RS20550;product=class I SAM-dependent methyltransferase;protein_id=WP_003899829.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 67361 68293 . + . ID=gene-DKM08_RS20555;Name=DKM08_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20555;old_locus_tag=DKM08_20535 NZ_QFYX01000005.1 Protein Homology CDS 67361 68293 . + 0 ID=cds-WP_003900814.1;Parent=gene-DKM08_RS20555;Dbxref=GenBank:WP_003900814.1;Name=WP_003900814.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214660.1;locus_tag=DKM08_RS20555;product=class I SAM-dependent methyltransferase;protein_id=WP_003900814.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 68433 69908 . + . ID=gene-DKM08_RS20560;Name=DKM08_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20560;old_locus_tag=DKM08_20540 NZ_QFYX01000005.1 Protein Homology CDS 68433 69908 . + 0 ID=cds-WP_003913557.1;Parent=gene-DKM08_RS20560;Dbxref=GenBank:WP_003913557.1;Name=WP_003913557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705823.1;locus_tag=DKM08_RS20560;product=aldehyde dehydrogenase family protein;protein_id=WP_003913557.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 69983 70843 . + . ID=gene-DKM08_RS20565;Name=DKM08_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20565;old_locus_tag=DKM08_20545 NZ_QFYX01000005.1 Protein Homology CDS 69983 70843 . + 0 ID=cds-WP_003400979.1;Parent=gene-DKM08_RS20565;Dbxref=GenBank:WP_003400979.1;Name=WP_003400979.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214662.1;locus_tag=DKM08_RS20565;product=SDR family oxidoreductase;protein_id=WP_003400979.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 70850 71818 . + . ID=gene-DKM08_RS20570;Name=DKM08_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20570;old_locus_tag=DKM08_20550 NZ_QFYX01000005.1 Protein Homology CDS 70850 71818 . + 0 ID=cds-WP_003400985.1;Parent=gene-DKM08_RS20570;Dbxref=GenBank:WP_003400985.1;Name=WP_003400985.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214663.1;locus_tag=DKM08_RS20570;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003400985.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 71815 72102 . - . ID=gene-DKM08_RS20575;Name=DKM08_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20575;old_locus_tag=DKM08_20555 NZ_QFYX01000005.1 Protein Homology CDS 71815 72102 . - 0 ID=cds-WP_003400989.1;Parent=gene-DKM08_RS20575;Dbxref=GenBank:WP_003400989.1;Name=WP_003400989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214664.1;locus_tag=DKM08_RS20575;product=hypothetical protein;protein_id=WP_003400989.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 72693 74375 . - . ID=gene-DKM08_RS20585;Name=DKM08_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20585;old_locus_tag=DKM08_20565 NZ_QFYX01000005.1 Protein Homology CDS 72693 74375 . - 0 ID=cds-WP_003911119.1;Parent=gene-DKM08_RS20585;Dbxref=GenBank:WP_003911119.1;Name=WP_003911119.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912517.1;locus_tag=DKM08_RS20585;product=PE family protein;protein_id=WP_003911119.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 74525 76179 . - . ID=gene-DKM08_RS20590;Name=DKM08_RS20590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20590;old_locus_tag=DKM08_20570;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 74525 76179 . - 0 ID=cds-DKM08_RS20590;Parent=gene-DKM08_RS20590;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020730540.1;locus_tag=DKM08_RS20590;product=PE family protein;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 76305 77135 . - . ID=gene-DKM08_RS20600;Name=ptbB;gbkey=Gene;gene=ptbB;gene_biotype=protein_coding;locus_tag=DKM08_RS20600;old_locus_tag=DKM08_20580 NZ_QFYX01000005.1 Protein Homology CDS 76305 77135 . - 0 ID=cds-WP_010950352.1;Parent=gene-DKM08_RS20600;Dbxref=GenBank:WP_010950352.1;Name=WP_010950352.1;gbkey=CDS;gene=ptbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214667.1;locus_tag=DKM08_RS20600;product=tyrosine-protein phosphatase PtbB;protein_id=WP_010950352.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 77137 78348 . - . ID=gene-DKM08_RS20605;Name=DKM08_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20605;old_locus_tag=DKM08_20585 NZ_QFYX01000005.1 Protein Homology CDS 77137 78348 . - 0 ID=cds-WP_147020942.1;Parent=gene-DKM08_RS20605;Dbxref=GenBank:WP_147020942.1;Name=WP_147020942.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214668.1;locus_tag=DKM08_RS20605;product=acyl-CoA dehydrogenase family protein;protein_id=WP_147020942.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 78465 78711 . + . ID=gene-DKM08_RS20610;Name=DKM08_RS20610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20610;old_locus_tag=DKM08_20590;partial=true;pseudo=true;start_range=.,78465 NZ_QFYX01000005.1 Protein Homology CDS 78465 78711 . + 0 ID=cds-DKM08_RS20610;Parent=gene-DKM08_RS20610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009956636.1;locus_tag=DKM08_RS20610;partial=true;product=DUF1348 family protein;pseudo=true;start_range=.,78465;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 78772 79872 . + . ID=gene-DKM08_RS20615;Name=pntAa;gbkey=Gene;gene=pntAa;gene_biotype=protein_coding;locus_tag=DKM08_RS20615;old_locus_tag=DKM08_20595 NZ_QFYX01000005.1 Protein Homology CDS 78772 79872 . + 0 ID=cds-WP_003401026.1;Parent=gene-DKM08_RS20615;Dbxref=GenBank:WP_003401026.1;Name=WP_003401026.1;Ontology_term=GO:1902600;gbkey=CDS;gene=pntAa;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214669.1;locus_tag=DKM08_RS20615;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_003401026.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 79873 80205 . + . ID=gene-DKM08_RS20620;Name=pntAb;gbkey=Gene;gene=pntAb;gene_biotype=protein_coding;locus_tag=DKM08_RS20620;old_locus_tag=DKM08_20600 NZ_QFYX01000005.1 Protein Homology CDS 79873 80205 . + 0 ID=cds-WP_010950353.1;Parent=gene-DKM08_RS20620;Dbxref=GenBank:WP_010950353.1;Name=WP_010950353.1;gbkey=CDS;gene=pntAb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214670.1;locus_tag=DKM08_RS20620;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_010950353.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 80202 81629 . + . ID=gene-DKM08_RS20625;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=DKM08_RS20625;old_locus_tag=DKM08_20605 NZ_QFYX01000005.1 Protein Homology CDS 80202 81629 . + 0 ID=cds-WP_003899835.1;Parent=gene-DKM08_RS20625;Dbxref=GenBank:WP_003899835.1;Name=WP_003899835.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214671.1;locus_tag=DKM08_RS20625;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_003899835.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 81645 81773 . - . ID=gene-DKM08_RS20630;Name=DKM08_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20630;old_locus_tag=DKM08_20610 NZ_QFYX01000005.1 Protein Homology CDS 81645 81773 . - 0 ID=cds-WP_003910049.1;Parent=gene-DKM08_RS20630;Dbxref=GenBank:WP_003910049.1;Name=WP_003910049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408797.1;locus_tag=DKM08_RS20630;product=hypothetical protein;protein_id=WP_003910049.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 81935 82579 . + . ID=gene-DKM08_RS20635;Name=DKM08_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20635;old_locus_tag=DKM08_20615 NZ_QFYX01000005.1 Protein Homology CDS 81935 82579 . + 0 ID=cds-WP_003401044.1;Parent=gene-DKM08_RS20635;Dbxref=GenBank:WP_003401044.1;Name=WP_003401044.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214672.1;locus_tag=DKM08_RS20635;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401044.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 82583 83989 . - . ID=gene-DKM08_RS20640;Name=DKM08_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20640;old_locus_tag=DKM08_20620 NZ_QFYX01000005.1 Protein Homology CDS 82583 83989 . - 0 ID=cds-WP_010950354.1;Parent=gene-DKM08_RS20640;Dbxref=GenBank:WP_010950354.1;Name=WP_010950354.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177697.1;locus_tag=DKM08_RS20640;product=PE family protein;protein_id=WP_010950354.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 84081 85589 . - . ID=gene-DKM08_RS20645;Name=DKM08_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20645;old_locus_tag=DKM08_20625 NZ_QFYX01000005.1 Protein Homology CDS 84081 85589 . - 0 ID=cds-WP_010950355.1;Parent=gene-DKM08_RS20645;Dbxref=GenBank:WP_010950355.1;Name=WP_010950355.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177698.1;locus_tag=DKM08_RS20645;product=PE family protein;protein_id=WP_010950355.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 85757 87106 . + . ID=gene-DKM08_RS20650;Name=DKM08_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20650;old_locus_tag=DKM08_20630 NZ_QFYX01000005.1 Protein Homology CDS 85757 87106 . + 0 ID=cds-WP_003401056.1;Parent=gene-DKM08_RS20650;Dbxref=GenBank:WP_003401056.1;Name=WP_003401056.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214675.1;locus_tag=DKM08_RS20650;product=FAD-binding oxidoreductase;protein_id=WP_003401056.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 87134 88252 . - . ID=gene-DKM08_RS20655;Name=DKM08_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20655;old_locus_tag=DKM08_20635 NZ_QFYX01000005.1 Protein Homology CDS 87134 88252 . - 0 ID=cds-WP_003901814.1;Parent=gene-DKM08_RS20655;Dbxref=GenBank:WP_003901814.1;Name=WP_003901814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914562.1;locus_tag=DKM08_RS20655;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_003901814.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 88267 88722 . + . ID=gene-DKM08_RS20660;Name=DKM08_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20660;old_locus_tag=DKM08_20640 NZ_QFYX01000005.1 Protein Homology CDS 88267 88722 . + 0 ID=cds-WP_003401060.1;Parent=gene-DKM08_RS20660;Dbxref=GenBank:WP_003401060.1;Name=WP_003401060.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214677.1;locus_tag=DKM08_RS20660;product=acyl-CoA thioesterase;protein_id=WP_003401060.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 88821 89261 . + . ID=gene-DKM08_RS20670;Name=DKM08_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20670;old_locus_tag=DKM08_20650 NZ_QFYX01000005.1 Protein Homology CDS 88821 89261 . + 0 ID=cds-WP_003917895.1;Parent=gene-DKM08_RS20670;Dbxref=GenBank:WP_003917895.1;Name=WP_003917895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874167.1;locus_tag=DKM08_RS20670;product=SRPBCC family protein;protein_id=WP_003917895.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 89275 89967 . - . ID=gene-DKM08_RS20675;Name=DKM08_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20675;old_locus_tag=DKM08_20655 NZ_QFYX01000005.1 Protein Homology CDS 89275 89967 . - 0 ID=cds-WP_003401065.1;Parent=gene-DKM08_RS20675;Dbxref=GenBank:WP_003401065.1;Name=WP_003401065.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401065.1;locus_tag=DKM08_RS20675;product=GntR family transcriptional regulator;protein_id=WP_003401065.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 90145 91809 . + . ID=gene-DKM08_RS20680;Name=fadD5;gbkey=Gene;gene=fadD5;gene_biotype=protein_coding;locus_tag=DKM08_RS20680;old_locus_tag=DKM08_20660 NZ_QFYX01000005.1 Protein Homology CDS 90145 91809 . + 0 ID=cds-WP_010950356.1;Parent=gene-DKM08_RS20680;Dbxref=GenBank:WP_010950356.1;Name=WP_010950356.1;gbkey=CDS;gene=fadD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214680.1;locus_tag=DKM08_RS20680;product=fatty-acid--CoA ligase FadD5;protein_id=WP_010950356.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 92013 92810 . + . ID=gene-DKM08_RS20685;Name=DKM08_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20685;old_locus_tag=DKM08_20665 NZ_QFYX01000005.1 Protein Homology CDS 92013 92810 . + 0 ID=cds-WP_003401074.1;Parent=gene-DKM08_RS20685;Dbxref=GenBank:WP_003401074.1;Name=WP_003401074.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214681.1;locus_tag=DKM08_RS20685;product=MlaE family ABC transporter permease;protein_id=WP_003401074.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 92812 93681 . + . ID=gene-DKM08_RS20690;Name=DKM08_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20690;old_locus_tag=DKM08_20670 NZ_QFYX01000005.1 Protein Homology CDS 92812 93681 . + 0 ID=cds-WP_003401077.1;Parent=gene-DKM08_RS20690;Dbxref=GenBank:WP_003401077.1;Name=WP_003401077.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214682.1;locus_tag=DKM08_RS20690;product=MlaE family ABC transporter permease;protein_id=WP_003401077.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 93686 95050 . + . ID=gene-DKM08_RS20695;Name=DKM08_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20695;old_locus_tag=DKM08_20675 NZ_QFYX01000005.1 Protein Homology CDS 93686 95050 . + 0 ID=cds-WP_010950357.1;Parent=gene-DKM08_RS20695;Dbxref=GenBank:WP_010950357.1;Name=WP_010950357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177701.1;locus_tag=DKM08_RS20695;product=MCE family protein;protein_id=WP_010950357.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 95047 96087 . + . ID=gene-DKM08_RS20700;Name=DKM08_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20700;old_locus_tag=DKM08_20680 NZ_QFYX01000005.1 Protein Homology CDS 95047 96087 . + 0 ID=cds-WP_003401081.1;Parent=gene-DKM08_RS20700;Dbxref=GenBank:WP_003401081.1;Name=WP_003401081.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214684.1;locus_tag=DKM08_RS20700;product=virulence factor Mce family protein;protein_id=WP_003401081.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 96084 97631 . + . ID=gene-DKM08_RS20705;Name=DKM08_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20705;old_locus_tag=DKM08_20685 NZ_QFYX01000005.1 Protein Homology CDS 96084 97631 . + 0 ID=cds-WP_003401082.1;Parent=gene-DKM08_RS20705;Dbxref=GenBank:WP_003401082.1;Name=WP_003401082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214685.1;locus_tag=DKM08_RS20705;product=virulence factor Mce family protein;protein_id=WP_003401082.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 97628 99220 . + . ID=gene-DKM08_RS20710;Name=DKM08_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20710;old_locus_tag=DKM08_20690 NZ_QFYX01000005.1 Protein Homology CDS 97628 99220 . + 0 ID=cds-WP_003401084.1;Parent=gene-DKM08_RS20710;Dbxref=GenBank:WP_003401084.1;Name=WP_003401084.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214686.1;locus_tag=DKM08_RS20710;product=virulence factor Mce family protein;protein_id=WP_003401084.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 99217 100389 . + . ID=gene-DKM08_RS20715;Name=lprK;gbkey=Gene;gene=lprK;gene_biotype=protein_coding;locus_tag=DKM08_RS20715;old_locus_tag=DKM08_20695 NZ_QFYX01000005.1 Protein Homology CDS 99217 100389 . + 0 ID=cds-WP_003899841.1;Parent=gene-DKM08_RS20715;Dbxref=GenBank:WP_003899841.1;Name=WP_003899841.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprK;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214687.1;locus_tag=DKM08_RS20715;product=virulence factor Mce family protein;protein_id=WP_003899841.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 100383 101930 . + . ID=gene-DKM08_RS20720;Name=DKM08_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20720;old_locus_tag=DKM08_20700 NZ_QFYX01000005.1 Protein Homology CDS 100383 101930 . + 0 ID=cds-WP_003401091.1;Parent=gene-DKM08_RS20720;Dbxref=GenBank:WP_003401091.1;Name=WP_003401091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214688.1;locus_tag=DKM08_RS20720;product=virulence factor Mce family protein;protein_id=WP_003401091.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 101966 102607 . + . ID=gene-DKM08_RS20725;Name=DKM08_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20725;old_locus_tag=DKM08_20705 NZ_QFYX01000005.1 Protein Homology CDS 101966 102607 . + 0 ID=cds-WP_003401093.1;Parent=gene-DKM08_RS20725;Dbxref=GenBank:WP_003401093.1;Name=WP_003401093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214689.3;locus_tag=DKM08_RS20725;product=membrane protein;protein_id=WP_003401093.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 102604 103572 . + . ID=gene-DKM08_RS20730;Name=DKM08_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20730;old_locus_tag=DKM08_20710 NZ_QFYX01000005.1 Protein Homology CDS 102604 103572 . + 0 ID=cds-WP_003401096.1;Parent=gene-DKM08_RS20730;Dbxref=GenBank:WP_003401096.1;Name=WP_003401096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214690.1;locus_tag=DKM08_RS20730;product=RDD family protein;protein_id=WP_003401096.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 103569 104123 . + . ID=gene-DKM08_RS20735;Name=DKM08_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20735;old_locus_tag=DKM08_20715 NZ_QFYX01000005.1 Protein Homology CDS 103569 104123 . + 0 ID=cds-WP_003401099.1;Parent=gene-DKM08_RS20735;Dbxref=GenBank:WP_003401099.1;Name=WP_003401099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401099.1;locus_tag=DKM08_RS20735;product=mce1 operon protein;protein_id=WP_003401099.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 104090 104824 . + . ID=gene-DKM08_RS20740;Name=DKM08_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20740;old_locus_tag=DKM08_20720 NZ_QFYX01000005.1 Protein Homology CDS 104090 104824 . + 0 ID=cds-WP_003899844.1;Parent=gene-DKM08_RS20740;Dbxref=GenBank:WP_003899844.1;Name=WP_003899844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214692.1;locus_tag=DKM08_RS20740;product=Mce associated membrane protein;protein_id=WP_003899844.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 104855 105964 . - . ID=gene-DKM08_RS20745;Name=lprO;gbkey=Gene;gene=lprO;gene_biotype=protein_coding;locus_tag=DKM08_RS20745;old_locus_tag=DKM08_20725 NZ_QFYX01000005.1 Protein Homology CDS 104855 105964 . - 0 ID=cds-WP_003401102.1;Parent=gene-DKM08_RS20745;Dbxref=GenBank:WP_003401102.1;Name=WP_003401102.1;gbkey=CDS;gene=lprO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214693.1;locus_tag=DKM08_RS20745;product=phosphodiester glycosidase family protein;protein_id=WP_003401102.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 106044 107402 . - . ID=gene-DKM08_RS20750;Name=DKM08_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20750;old_locus_tag=DKM08_20730 NZ_QFYX01000005.1 Protein Homology CDS 106044 107402 . - 0 ID=cds-WP_003899846.1;Parent=gene-DKM08_RS20750;Dbxref=GenBank:WP_003899846.1;Name=WP_003899846.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214694.1;locus_tag=DKM08_RS20750;product=YhgE/Pip domain-containing protein;protein_id=WP_003899846.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 107429 108163 . - . ID=gene-DKM08_RS20755;Name=DKM08_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20755;old_locus_tag=DKM08_20735 NZ_QFYX01000005.1 Protein Homology CDS 107429 108163 . - 0 ID=cds-WP_003401107.1;Parent=gene-DKM08_RS20755;Dbxref=GenBank:WP_003401107.1;Name=WP_003401107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214695.1;locus_tag=DKM08_RS20755;product=pirin family protein;protein_id=WP_003401107.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 108180 109292 . - . ID=gene-DKM08_RS20760;Name=sigG;gbkey=Gene;gene=sigG;gene_biotype=protein_coding;locus_tag=DKM08_RS20760;old_locus_tag=DKM08_20740 NZ_QFYX01000005.1 Protein Homology CDS 108180 109292 . - 0 ID=cds-WP_003401110.1;Parent=gene-DKM08_RS20760;Dbxref=GenBank:WP_003401110.1;Name=WP_003401110.1;gbkey=CDS;gene=sigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214696.1;locus_tag=DKM08_RS20760;product=sigma-70 family RNA polymerase sigma factor SigG;protein_id=WP_003401110.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 109240 110079 . + . ID=gene-DKM08_RS20765;Name=DKM08_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20765;old_locus_tag=DKM08_20745 NZ_QFYX01000005.1 Protein Homology CDS 109240 110079 . + 0 ID=cds-WP_003401112.1;Parent=gene-DKM08_RS20765;Dbxref=GenBank:WP_003401112.1;Name=WP_003401112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214697.2;locus_tag=DKM08_RS20765;product=monoacylglycerol lipase;protein_id=WP_003401112.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 110121 110870 . + . ID=gene-DKM08_RS20770;Name=DKM08_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20770;old_locus_tag=DKM08_20750 NZ_QFYX01000005.1 Protein Homology CDS 110121 110870 . + 0 ID=cds-WP_003401116.1;Parent=gene-DKM08_RS20770;Dbxref=GenBank:WP_003401116.1;Name=WP_003401116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214698.1;locus_tag=DKM08_RS20770;product=DUF2786 domain-containing protein;protein_id=WP_003401116.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 110867 111376 . + . ID=gene-DKM08_RS20775;Name=DKM08_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20775;old_locus_tag=DKM08_20755 NZ_QFYX01000005.1 Protein Homology CDS 110867 111376 . + 0 ID=cds-WP_003401120.1;Parent=gene-DKM08_RS20775;Dbxref=GenBank:WP_003401120.1;Name=WP_003401120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214699.1;locus_tag=DKM08_RS20775;product=TIGR04338 family metallohydrolase;protein_id=WP_003401120.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 111421 113496 . + . ID=gene-DKM08_RS20780;Name=bglS;gbkey=Gene;gene=bglS;gene_biotype=protein_coding;locus_tag=DKM08_RS20780;old_locus_tag=DKM08_20760 NZ_QFYX01000005.1 Protein Homology CDS 111421 113496 . + 0 ID=cds-WP_010950358.1;Parent=gene-DKM08_RS20780;Dbxref=GenBank:WP_010950358.1;Name=WP_010950358.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;gene=bglS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392408.1;locus_tag=DKM08_RS20780;product=beta-glucosidase;protein_id=WP_010950358.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 113542 113703 . - . ID=gene-DKM08_RS20785;Name=mymT;gbkey=Gene;gene=mymT;gene_biotype=protein_coding;locus_tag=DKM08_RS20785;old_locus_tag=DKM08_20765 NZ_QFYX01000005.1 Protein Homology CDS 113542 113703 . - 0 ID=cds-WP_010886068.1;Parent=gene-DKM08_RS20785;Dbxref=GenBank:WP_010886068.1;Name=WP_010886068.1;gbkey=CDS;gene=mymT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837046.2;locus_tag=DKM08_RS20785;product=metallothionein MymT;protein_id=WP_010886068.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 113857 114519 . + . ID=gene-DKM08_RS20790;Name=DKM08_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20790;old_locus_tag=DKM08_20770 NZ_QFYX01000005.1 Protein Homology CDS 113857 114519 . + 0 ID=cds-WP_003401129.1;Parent=gene-DKM08_RS20790;Dbxref=GenBank:WP_003401129.1;Name=WP_003401129.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214701.1;locus_tag=DKM08_RS20790;product=O-methyltransferase;protein_id=WP_003401129.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 114638 115069 . + . ID=gene-DKM08_RS20795;Name=DKM08_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20795;old_locus_tag=DKM08_20775 NZ_QFYX01000005.1 Protein Homology CDS 114638 115069 . + 0 ID=cds-WP_003401141.1;Parent=gene-DKM08_RS20795;Dbxref=GenBank:WP_003401141.1;Name=WP_003401141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214702.1;locus_tag=DKM08_RS20795;product=SPW repeat protein;protein_id=WP_003401141.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 115148 116875 . - . ID=gene-DKM08_RS20800;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=DKM08_RS20800;old_locus_tag=DKM08_20780 NZ_QFYX01000005.1 Protein Homology CDS 115148 116875 . - 0 ID=cds-WP_003900824.1;Parent=gene-DKM08_RS20800;Dbxref=GenBank:WP_003900824.1;Name=WP_003900824.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214703.1;locus_tag=DKM08_RS20800;product=dihydroxy-acid dehydratase;protein_id=WP_003900824.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 117023 117313 . + . ID=gene-DKM08_RS20805;Name=DKM08_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20805;old_locus_tag=DKM08_20785 NZ_QFYX01000005.1 Protein Homology CDS 117023 117313 . + 0 ID=cds-WP_003401147.1;Parent=gene-DKM08_RS20805;Dbxref=GenBank:WP_003401147.1;Name=WP_003401147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214704.1;locus_tag=DKM08_RS20805;product=metal-sensitive transcriptional regulator;protein_id=WP_003401147.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 117441 118682 . + . ID=gene-DKM08_RS20810;Name=DKM08_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20810;old_locus_tag=DKM08_20790 NZ_QFYX01000005.1 Protein Homology CDS 117441 118682 . + 0 ID=cds-WP_003401149.1;Parent=gene-DKM08_RS20810;Dbxref=GenBank:WP_003401149.1;Name=WP_003401149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214705.1;locus_tag=DKM08_RS20810;product=Rv0191 family MFS efflux transporter;protein_id=WP_003401149.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 118759 119817 . + . ID=gene-DKM08_RS20815;Name=DKM08_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20815;old_locus_tag=DKM08_20795 NZ_QFYX01000005.1 Protein Homology CDS 118759 119817 . + 0 ID=cds-WP_003908487.1;Parent=gene-DKM08_RS20815;Dbxref=GenBank:WP_003908487.1;Name=WP_003908487.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799082.1;locus_tag=DKM08_RS20815;product=L%2CD-transpeptidase;protein_id=WP_003908487.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 119877 121724 . - . ID=gene-DKM08_RS20820;Name=DKM08_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20820;old_locus_tag=DKM08_20800 NZ_QFYX01000005.1 Protein Homology CDS 119877 121724 . - 0 ID=cds-WP_003401153.1;Parent=gene-DKM08_RS20820;Dbxref=GenBank:WP_003401153.1;Name=WP_003401153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214707.1;locus_tag=DKM08_RS20820;product=hypothetical protein;protein_id=WP_003401153.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 122031 125615 . + . ID=gene-DKM08_RS20825;Name=DKM08_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20825;old_locus_tag=DKM08_20805 NZ_QFYX01000005.1 Protein Homology CDS 122031 125615 . + 0 ID=cds-WP_010950359.1;Parent=gene-DKM08_RS20825;Dbxref=GenBank:WP_010950359.1;Name=WP_010950359.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214708.1;locus_tag=DKM08_RS20825;product=ABC transporter ATP-binding protein;protein_id=WP_010950359.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 126053 126688 . + . ID=gene-DKM08_RS20830;Name=DKM08_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20830;old_locus_tag=DKM08_20810 NZ_QFYX01000005.1 Protein Homology CDS 126053 126688 . + 0 ID=cds-WP_003901824.1;Parent=gene-DKM08_RS20830;Dbxref=GenBank:WP_003901824.1;Name=WP_003901824.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214709.1;locus_tag=DKM08_RS20830;product=response regulator transcription factor;protein_id=WP_003901824.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 126801 127385 . + . ID=gene-DKM08_RS20835;Name=DKM08_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20835;old_locus_tag=DKM08_20815 NZ_QFYX01000005.1 Protein Homology CDS 126801 127385 . + 0 ID=cds-WP_003401168.1;Parent=gene-DKM08_RS20835;Dbxref=GenBank:WP_003401168.1;Name=WP_003401168.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214710.1;locus_tag=DKM08_RS20835;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401168.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 127385 129631 . + . ID=gene-DKM08_RS20840;Name=DKM08_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20840;old_locus_tag=DKM08_20820 NZ_QFYX01000005.1 Protein Homology CDS 127385 129631 . + 0 ID=cds-WP_003908489.1;Parent=gene-DKM08_RS20840;Dbxref=GenBank:WP_003908489.1;Name=WP_003908489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302437.1;locus_tag=DKM08_RS20840;product=molybdopterin oxidoreductase family protein;protein_id=WP_003908489.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 129672 131663 . - . ID=gene-DKM08_RS20845;Name=zmp1;gbkey=Gene;gene=zmp1;gene_biotype=protein_coding;locus_tag=DKM08_RS20845;old_locus_tag=DKM08_20825 NZ_QFYX01000005.1 Protein Homology CDS 129672 131663 . - 0 ID=cds-WP_003401172.1;Parent=gene-DKM08_RS20845;Dbxref=GenBank:WP_003401172.1;Name=WP_003401172.1;gbkey=CDS;gene=zmp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214712.1;locus_tag=DKM08_RS20845;product=zinc metalloprotease Zmp1;protein_id=WP_003401172.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 131706 132365 . + . ID=gene-DKM08_RS20850;Name=DKM08_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20850;old_locus_tag=DKM08_20830 NZ_QFYX01000005.1 Protein Homology CDS 131706 132365 . + 0 ID=cds-WP_003401181.1;Parent=gene-DKM08_RS20850;Dbxref=GenBank:WP_003401181.1;Name=WP_003401181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214713.1;locus_tag=DKM08_RS20850;product=hypothetical protein;protein_id=WP_003401181.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 132362 133051 . + . ID=gene-DKM08_RS20855;Name=DKM08_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20855;old_locus_tag=DKM08_20835 NZ_QFYX01000005.1 Protein Homology CDS 132362 133051 . + 0 ID=cds-WP_003401184.1;Parent=gene-DKM08_RS20855;Dbxref=GenBank:WP_003401184.1;Name=WP_003401184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214714.1;locus_tag=DKM08_RS20855;product=hypothetical protein;protein_id=WP_003401184.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 133048 133551 . - . ID=gene-DKM08_RS20860;Name=DKM08_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20860;old_locus_tag=DKM08_20840 NZ_QFYX01000005.1 Protein Homology CDS 133048 133551 . - 0 ID=cds-WP_003401187.1;Parent=gene-DKM08_RS20860;Dbxref=GenBank:WP_003401187.1;Name=WP_003401187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214715.1;locus_tag=DKM08_RS20860;product=hypothetical protein;protein_id=WP_003401187.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 133548 136448 . - . ID=gene-DKM08_RS20865;Name=mmpL11;gbkey=Gene;gene=mmpL11;gene_biotype=protein_coding;locus_tag=DKM08_RS20865;old_locus_tag=DKM08_20845 NZ_QFYX01000005.1 Protein Homology CDS 133548 136448 . - 0 ID=cds-WP_003401190.1;Parent=gene-DKM08_RS20865;Dbxref=GenBank:WP_003401190.1;Name=WP_003401190.1;gbkey=CDS;gene=mmpL11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214716.1;locus_tag=DKM08_RS20865;product=RND transporter MmpL11;protein_id=WP_003401190.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 136670 137080 . + . ID=gene-DKM08_RS20870;Name=DKM08_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20870;old_locus_tag=DKM08_20850 NZ_QFYX01000005.1 Protein Homology CDS 136670 137080 . + 0 ID=cds-WP_003401194.1;Parent=gene-DKM08_RS20870;Dbxref=GenBank:WP_003401194.1;Name=WP_003401194.1;Ontology_term=GO:0015886,GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214717.1;locus_tag=DKM08_RS20870;product=hemophore;protein_id=WP_003401194.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 137132 138370 . - . ID=gene-DKM08_RS20875;Name=DKM08_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20875;old_locus_tag=DKM08_20855 NZ_QFYX01000005.1 Protein Homology CDS 137132 138370 . - 0 ID=cds-WP_003901825.1;Parent=gene-DKM08_RS20875;Dbxref=GenBank:WP_003901825.1;Name=WP_003901825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214718.2;locus_tag=DKM08_RS20875;product=TIGR00374 family protein;protein_id=WP_003901825.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 138540 139643 . + . ID=gene-DKM08_RS20880;Name=DKM08_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20880;old_locus_tag=DKM08_20860 NZ_QFYX01000005.1 Protein Homology CDS 138540 139643 . + 0 ID=cds-WP_010950360.1;Parent=gene-DKM08_RS20880;Dbxref=GenBank:WP_010950360.1;Name=WP_010950360.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214719.1;locus_tag=DKM08_RS20880;product=AI-2E family transporter;protein_id=WP_010950360.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 139640 142474 . - . ID=gene-DKM08_RS20885;Name=mmpL3;gbkey=Gene;gene=mmpL3;gene_biotype=protein_coding;locus_tag=DKM08_RS20885;old_locus_tag=DKM08_20865 NZ_QFYX01000005.1 Protein Homology CDS 139640 142474 . - 0 ID=cds-WP_010950361.1;Parent=gene-DKM08_RS20885;Dbxref=GenBank:WP_010950361.1;Name=WP_010950361.1;gbkey=CDS;gene=mmpL3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214720.1;locus_tag=DKM08_RS20885;product=trehalose monomycolate RND transporter MmpL3;protein_id=WP_010950361.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 142540 143268 . - . ID=gene-DKM08_RS20890;Name=DKM08_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20890;old_locus_tag=DKM08_20870 NZ_QFYX01000005.1 Protein Homology CDS 142540 143268 . - 0 ID=cds-WP_003401202.1;Parent=gene-DKM08_RS20890;Dbxref=GenBank:WP_003401202.1;Name=WP_003401202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214721.1;locus_tag=DKM08_RS20890;product=NYN domain-containing protein;protein_id=WP_003401202.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 143271 144062 . - . ID=gene-DKM08_RS20895;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=DKM08_RS20895;old_locus_tag=DKM08_20875 NZ_QFYX01000005.1 Protein Homology CDS 143271 144062 . - 0 ID=cds-WP_003401204.1;Parent=gene-DKM08_RS20895;Dbxref=GenBank:WP_003401204.1;Name=WP_003401204.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214722.1;locus_tag=DKM08_RS20895;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_003401204.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 144194 145279 . + . ID=gene-DKM08_RS20900;Name=DKM08_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20900;old_locus_tag=DKM08_20880 NZ_QFYX01000005.1 Protein Homology CDS 144194 145279 . + 0 ID=cds-WP_003401206.1;Parent=gene-DKM08_RS20900;Dbxref=GenBank:WP_003401206.1;Name=WP_003401206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214723.1;locus_tag=DKM08_RS20900;product=hypothetical protein;protein_id=WP_003401206.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 145276 146754 . + . ID=gene-DKM08_RS20905;Name=DKM08_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20905;old_locus_tag=DKM08_20885 NZ_QFYX01000005.1 Protein Homology CDS 145276 146754 . + 0 ID=cds-WP_003401208.1;Parent=gene-DKM08_RS20905;Dbxref=GenBank:WP_003401208.1;Name=WP_003401208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214724.1;locus_tag=DKM08_RS20905;product=hypothetical protein;protein_id=WP_003401208.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 146938 148758 . + . ID=gene-DKM08_RS20910;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=DKM08_RS20910;old_locus_tag=DKM08_20890 NZ_QFYX01000005.1 Protein Homology CDS 146938 148758 . + 0 ID=cds-WP_003401212.1;Parent=gene-DKM08_RS20910;Dbxref=GenBank:WP_003401212.1;Name=WP_003401212.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214725.1;locus_tag=DKM08_RS20910;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_003401212.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 148825 149796 . - . ID=gene-DKM08_RS20915;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=DKM08_RS20915;old_locus_tag=DKM08_20895 NZ_QFYX01000005.1 Protein Homology CDS 148825 149796 . - 0 ID=cds-WP_003401213.1;Parent=gene-DKM08_RS20915;Dbxref=GenBank:WP_003401213.1;Name=WP_003401213.1;Ontology_term=GO:0009435,GO:0000309;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214726.1;locus_tag=DKM08_RS20915;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_003401213.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 149793 151226 . - . ID=gene-DKM08_RS20920;Name=DKM08_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20920;old_locus_tag=DKM08_20900 NZ_QFYX01000005.1 Protein Homology CDS 149793 151226 . - 0 ID=cds-WP_003911129.1;Parent=gene-DKM08_RS20920;Dbxref=GenBank:WP_003911129.1;Name=WP_003911129.1;Ontology_term=GO:0003824,GO:0031419,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cobalamin binding|0031419||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911129.1;locus_tag=DKM08_RS20920;product=B12-binding domain-containing radical SAM protein;protein_id=WP_003911129.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 151316 152833 . + . ID=gene-DKM08_RS20925;Name=fadD4;gbkey=Gene;gene=fadD4;gene_biotype=protein_coding;locus_tag=DKM08_RS20925;old_locus_tag=DKM08_20905 NZ_QFYX01000005.1 Protein Homology CDS 151316 152833 . + 0 ID=cds-WP_003401216.1;Parent=gene-DKM08_RS20925;Dbxref=GenBank:WP_003401216.1;Name=WP_003401216.1;gbkey=CDS;gene=fadD4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009979674.1;locus_tag=DKM08_RS20925;product=fatty-acid--CoA ligase FadD4;protein_id=WP_003401216.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 152875 154041 . - . ID=gene-DKM08_RS20930;Name=DKM08_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20930;old_locus_tag=DKM08_20910 NZ_QFYX01000005.1 Protein Homology CDS 152875 154041 . - 0 ID=cds-WP_003902894.1;Parent=gene-DKM08_RS20930;Dbxref=GenBank:WP_003902894.1;Name=WP_003902894.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799085.1;locus_tag=DKM08_RS20930;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902894.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 154098 155111 . + . ID=gene-DKM08_RS20935;Name=DKM08_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20935;old_locus_tag=DKM08_20915 NZ_QFYX01000005.1 Protein Homology CDS 154098 155111 . + 0 ID=cds-WP_003401224.1;Parent=gene-DKM08_RS20935;Dbxref=GenBank:WP_003401224.1;Name=WP_003401224.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214730.1;locus_tag=DKM08_RS20935;product=MaoC family dehydratase;protein_id=WP_003401224.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 155108 156016 . - . ID=gene-DKM08_RS20940;Name=lipW;gbkey=Gene;gene=lipW;gene_biotype=protein_coding;locus_tag=DKM08_RS20940;old_locus_tag=DKM08_20920 NZ_QFYX01000005.1 Protein Homology CDS 155108 156016 . - 0 ID=cds-WP_003401227.1;Parent=gene-DKM08_RS20940;Dbxref=GenBank:WP_003401227.1;Name=WP_003401227.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipW;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214731.1;locus_tag=DKM08_RS20940;product=alpha/beta hydrolase;protein_id=WP_003401227.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 156109 157437 . + . ID=gene-DKM08_RS20945;Name=DKM08_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20945;old_locus_tag=DKM08_20925 NZ_QFYX01000005.1 Protein Homology CDS 156109 157437 . + 0 ID=cds-WP_010950362.1;Parent=gene-DKM08_RS20945;Dbxref=GenBank:WP_010950362.1;Name=WP_010950362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214732.1;locus_tag=DKM08_RS20945;product=molybdopterin-dependent oxidoreductase;protein_id=WP_010950362.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 157439 157987 . + . ID=gene-DKM08_RS20950;Name=DKM08_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20950;old_locus_tag=DKM08_20930 NZ_QFYX01000005.1 Protein Homology CDS 157439 157987 . + 0 ID=cds-WP_003401230.1;Parent=gene-DKM08_RS20950;Dbxref=GenBank:WP_003401230.1;Name=WP_003401230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214733.1;locus_tag=DKM08_RS20950;product=hypothetical protein;protein_id=WP_003401230.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 157997 159208 . + . ID=gene-DKM08_RS20955;Name=lipC;gbkey=Gene;gene=lipC;gene_biotype=protein_coding;locus_tag=DKM08_RS20955;old_locus_tag=DKM08_20935 NZ_QFYX01000005.1 Protein Homology CDS 157997 159208 . + 0 ID=cds-WP_003899863.1;Parent=gene-DKM08_RS20955;Dbxref=GenBank:WP_003899863.1;Name=WP_003899863.1;gbkey=CDS;gene=lipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214734.1;locus_tag=DKM08_RS20955;product=esterase LipC;protein_id=WP_003899863.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 159252 159953 . + . ID=gene-DKM08_RS20960;Name=DKM08_RS20960;end_range=159953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20960;old_locus_tag=DKM08_20940;partial=true;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 159252 159953 . + 0 ID=cds-DKM08_RS20960;Parent=gene-DKM08_RS20960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=159953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214735.1;locus_tag=DKM08_RS20960;partial=true;product=wax ester/triacylglycerol synthase family O-acyltransferase;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 159938 161048 . - . ID=gene-DKM08_RS20965;Name=DKM08_RS20965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS20965;old_locus_tag=DKM08_20945;partial=true;pseudo=true;start_range=.,159938 NZ_QFYX01000005.1 Protein Homology CDS 159938 161048 . - 0 ID=cds-DKM08_RS20965;Parent=gene-DKM08_RS20965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214737.1;locus_tag=DKM08_RS20965;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,159938;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 161147 161911 . - . ID=gene-DKM08_RS20970;Name=DKM08_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20970;old_locus_tag=DKM08_20950 NZ_QFYX01000005.1 Protein Homology CDS 161147 161911 . - 0 ID=cds-WP_010950364.1;Parent=gene-DKM08_RS20970;Dbxref=GenBank:WP_010950364.1;Name=WP_010950364.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214738.1;locus_tag=DKM08_RS20970;product=class I SAM-dependent methyltransferase;protein_id=WP_010950364.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 161947 163101 . + . ID=gene-DKM08_RS20975;Name=DKM08_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20975;old_locus_tag=DKM08_20955 NZ_QFYX01000005.1 Protein Homology CDS 161947 163101 . + 0 ID=cds-WP_003401246.1;Parent=gene-DKM08_RS20975;Dbxref=GenBank:WP_003401246.1;Name=WP_003401246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214739.1;locus_tag=DKM08_RS20975;product=glycosyltransferase family 4 protein;protein_id=WP_003401246.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 163118 164848 . - . ID=gene-DKM08_RS20980;Name=DKM08_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20980;old_locus_tag=DKM08_20960 NZ_QFYX01000005.1 Protein Homology CDS 163118 164848 . - 0 ID=cds-WP_023349426.1;Parent=gene-DKM08_RS20980;Dbxref=GenBank:WP_023349426.1;Name=WP_023349426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214740.1;locus_tag=DKM08_RS20980;product=hypothetical protein;protein_id=WP_023349426.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 164858 166138 . - . ID=gene-DKM08_RS20985;Name=DKM08_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20985;old_locus_tag=DKM08_20965 NZ_QFYX01000005.1 Protein Homology CDS 164858 166138 . - 0 ID=cds-WP_031702097.1;Parent=gene-DKM08_RS20985;Dbxref=GenBank:WP_031702097.1;Name=WP_031702097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019284112.1;locus_tag=DKM08_RS20985;product=DUF3068 domain-containing protein;protein_id=WP_031702097.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 166140 166239 . - . ID=gene-DKM08_RS22830;Name=DKM08_RS22830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22830;partial=true;pseudo=true;start_range=.,166140 NZ_QFYX01000005.1 Protein Homology CDS 166140 166239 . - 0 ID=cds-DKM08_RS22830;Parent=gene-DKM08_RS22830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=DKM08_RS22830;partial=true;product=hypothetical protein;pseudo=true;start_range=.,166140;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 166339 167562 . + . ID=gene-DKM08_RS20990;Name=DKM08_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20990;old_locus_tag=DKM08_20970 NZ_QFYX01000005.1 Protein Homology CDS 166339 167562 . + 0 ID=cds-WP_003401260.1;Parent=gene-DKM08_RS20990;Dbxref=GenBank:WP_003401260.1;Name=WP_003401260.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214742.1;locus_tag=DKM08_RS20990;product=acyltransferase family protein;protein_id=WP_003401260.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 167590 168003 . - . ID=gene-DKM08_RS20995;Name=DKM08_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS20995;old_locus_tag=DKM08_20975 NZ_QFYX01000005.1 Protein Homology CDS 167590 168003 . - 0 ID=cds-WP_003911071.1;Parent=gene-DKM08_RS20995;Dbxref=GenBank:WP_003911071.1;Name=WP_003911071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214743.2;locus_tag=DKM08_RS20995;product=PIN domain nuclease;protein_id=WP_003911071.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 167994 168188 . - . ID=gene-DKM08_RS21000;Name=DKM08_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21000;old_locus_tag=DKM08_20980 NZ_QFYX01000005.1 Protein Homology CDS 167994 168188 . - 0 ID=cds-WP_003911072.1;Parent=gene-DKM08_RS21000;Dbxref=GenBank:WP_003911072.1;Name=WP_003911072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911072.1;locus_tag=DKM08_RS21000;product=hypothetical protein;protein_id=WP_003911072.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 168267 169247 . - . ID=gene-DKM08_RS21005;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=DKM08_RS21005;old_locus_tag=DKM08_20985 NZ_QFYX01000005.1 Protein Homology CDS 168267 169247 . - 0 ID=cds-WP_003401263.1;Parent=gene-DKM08_RS21005;Dbxref=GenBank:WP_003401263.1;Name=WP_003401263.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214744.1;locus_tag=DKM08_RS21005;product=phosphotriesterase;protein_id=WP_003401263.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 169342 171048 . + . ID=gene-DKM08_RS21010;Name=DKM08_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21010;old_locus_tag=DKM08_20990 NZ_QFYX01000005.1 Protein Homology CDS 169342 171048 . + 0 ID=cds-WP_003401265.1;Parent=gene-DKM08_RS21010;Dbxref=GenBank:WP_003401265.1;Name=WP_003401265.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214745.1;locus_tag=DKM08_RS21010;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401265.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 171183 171872 . + . ID=gene-DKM08_RS21015;Name=DKM08_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21015;old_locus_tag=DKM08_20995 NZ_QFYX01000005.1 Protein Homology CDS 171183 171872 . + 0 ID=cds-WP_003401268.1;Parent=gene-DKM08_RS21015;Dbxref=GenBank:WP_003401268.1;Name=WP_003401268.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214746.1;locus_tag=DKM08_RS21015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401268.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 171869 172813 . + . ID=gene-DKM08_RS21020;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=DKM08_RS21020;old_locus_tag=DKM08_21000 NZ_QFYX01000005.1 Protein Homology CDS 171869 172813 . + 0 ID=cds-WP_003401270.1;Parent=gene-DKM08_RS21020;Dbxref=GenBank:WP_003401270.1;Name=WP_003401270.1;gbkey=CDS;gene=nrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214747.1;locus_tag=DKM08_RS21020;product=R2-like ligand-binding oxidase;protein_id=WP_003401270.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 172889 174262 . - . ID=gene-DKM08_RS21025;Name=DKM08_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21025;old_locus_tag=DKM08_21005 NZ_QFYX01000005.1 Protein Homology CDS 172889 174262 . - 0 ID=cds-WP_003912534.1;Parent=gene-DKM08_RS21025;Dbxref=GenBank:WP_003912534.1;Name=WP_003912534.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908967.1;locus_tag=DKM08_RS21025;product=NADP-dependent succinic semialdehyde dehydrogenase;protein_id=WP_003912534.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 174450 175898 . - . ID=gene-DKM08_RS21030;Name=DKM08_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21030;old_locus_tag=DKM08_21010 NZ_QFYX01000005.1 Protein Homology CDS 174450 175898 . - 0 ID=cds-WP_003401279.1;Parent=gene-DKM08_RS21030;Dbxref=GenBank:WP_003401279.1;Name=WP_003401279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214749.1;locus_tag=DKM08_RS21030;product=lipase maturation factor family protein;protein_id=WP_003401279.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 175933 180135 . - . ID=gene-DKM08_RS21035;Name=aftD;gbkey=Gene;gene=aftD;gene_biotype=protein_coding;locus_tag=DKM08_RS21035;old_locus_tag=DKM08_21015 NZ_QFYX01000005.1 Protein Homology CDS 175933 180135 . - 0 ID=cds-WP_010950366.1;Parent=gene-DKM08_RS21035;Dbxref=GenBank:WP_010950366.1;Name=WP_010950366.1;Ontology_term=GO:0016740;gbkey=CDS;gene=aftD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214750.1;locus_tag=DKM08_RS21035;product=DUF3367 domain-containing protein;protein_id=WP_010950366.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 180182 180355 . - . ID=gene-DKM08_RS21040;Name=DKM08_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21040;old_locus_tag=DKM08_21020 NZ_QFYX01000005.1 Protein Homology CDS 180182 180355 . - 0 ID=cds-WP_003401289.1;Parent=gene-DKM08_RS21040;Dbxref=GenBank:WP_003401289.1;Name=WP_003401289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177619.1;locus_tag=DKM08_RS21040;product=DUF2613 domain-containing protein;protein_id=WP_003401289.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 180470 181636 . + . ID=gene-DKM08_RS21045;Name=lpqI;gbkey=Gene;gene=lpqI;gene_biotype=protein_coding;locus_tag=DKM08_RS21045;old_locus_tag=DKM08_21025 NZ_QFYX01000005.1 Protein Homology CDS 180470 181636 . + 0 ID=cds-WP_010950367.1;Parent=gene-DKM08_RS21045;Dbxref=GenBank:WP_010950367.1;Name=WP_010950367.1;gbkey=CDS;gene=lpqI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177702.1;locus_tag=DKM08_RS21045;product=beta-N-acetylhexosaminidase;protein_id=WP_010950367.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 181712 182326 . + . ID=gene-DKM08_RS21050;Name=DKM08_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21050;old_locus_tag=DKM08_21030 NZ_QFYX01000005.1 Protein Homology CDS 181712 182326 . + 0 ID=cds-WP_003401297.1;Parent=gene-DKM08_RS21050;Dbxref=GenBank:WP_003401297.1;Name=WP_003401297.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214752.1;locus_tag=DKM08_RS21050;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401297.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 182388 182621 . + . ID=gene-DKM08_RS21055;Name=DKM08_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21055;old_locus_tag=DKM08_21035 NZ_QFYX01000005.1 Protein Homology CDS 182388 182621 . + 0 ID=cds-WP_003401300.1;Parent=gene-DKM08_RS21055;Dbxref=GenBank:WP_003401300.1;Name=WP_003401300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214753.1;locus_tag=DKM08_RS21055;product=antitoxin;protein_id=WP_003401300.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 182629 183066 . + . ID=gene-DKM08_RS21060;Name=DKM08_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21060;old_locus_tag=DKM08_21040 NZ_QFYX01000005.1 Protein Homology CDS 182629 183066 . + 0 ID=cds-WP_003909178.1;Parent=gene-DKM08_RS21060;Dbxref=GenBank:WP_003909178.1;Name=WP_003909178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214754.1;locus_tag=DKM08_RS21060;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003909178.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 183096 183938 . - . ID=gene-DKM08_RS21065;Name=htdX;gbkey=Gene;gene=htdX;gene_biotype=protein_coding;locus_tag=DKM08_RS21065;old_locus_tag=DKM08_21045 NZ_QFYX01000005.1 Protein Homology CDS 183096 183938 . - 0 ID=cds-WP_003401305.1;Parent=gene-DKM08_RS21065;Dbxref=GenBank:WP_003401305.1;Name=WP_003401305.1;gbkey=CDS;gene=htdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214755.1;locus_tag=DKM08_RS21065;product=3-hydroxyacyl-thioester dehydratase HtdX;protein_id=WP_003401305.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 183949 185313 . - . ID=gene-DKM08_RS21070;Name=DKM08_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21070;old_locus_tag=DKM08_21050 NZ_QFYX01000005.1 Protein Homology CDS 183949 185313 . - 0 ID=cds-WP_003899869.1;Parent=gene-DKM08_RS21070;Dbxref=GenBank:WP_003899869.1;Name=WP_003899869.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214756.1;locus_tag=DKM08_RS21070;product=3-oxoacyl-ACP reductase;protein_id=WP_003899869.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 185455 186777 . + . ID=gene-DKM08_RS21075;Name=DKM08_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21075;old_locus_tag=DKM08_21055 NZ_QFYX01000005.1 Protein Homology CDS 185455 186777 . + 0 ID=cds-WP_023349427.1;Parent=gene-DKM08_RS21075;Dbxref=GenBank:WP_023349427.1;Name=WP_023349427.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214757.1;locus_tag=DKM08_RS21075;product=acetyl-CoA C-acetyltransferase;protein_id=WP_023349427.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 187083 188918 . - . ID=gene-DKM08_RS21080;Name=DKM08_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21080;old_locus_tag=DKM08_21060 NZ_QFYX01000005.1 Protein Homology CDS 187083 188918 . - 0 ID=cds-WP_010950368.1;Parent=gene-DKM08_RS21080;Dbxref=GenBank:WP_010950368.1;Name=WP_010950368.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214758.1;locus_tag=DKM08_RS21080;product=acyl-CoA dehydrogenase;protein_id=WP_010950368.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 189290 189778 . + . ID=gene-DKM08_RS21085;Name=DKM08_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21085;old_locus_tag=DKM08_21065 NZ_QFYX01000005.1 Protein Homology CDS 189290 189778 . + 0 ID=cds-WP_023349428.1;Parent=gene-DKM08_RS21085;Dbxref=GenBank:WP_023349428.1;Name=WP_023349428.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214759.1;locus_tag=DKM08_RS21085;product=flavin reductase family protein;protein_id=WP_023349428.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 190094 191404 . + . ID=gene-DKM08_RS21090;Name=DKM08_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21090;old_locus_tag=DKM08_21070 NZ_QFYX01000005.1 Protein Homology CDS 190094 191404 . + 0 ID=cds-WP_003401317.1;Parent=gene-DKM08_RS21090;Dbxref=GenBank:WP_003401317.1;Name=WP_003401317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214760.1;locus_tag=DKM08_RS21090;product=integral membrane protein;protein_id=WP_003401317.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 191401 192147 . - . ID=gene-DKM08_RS21095;Name=DKM08_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21095;old_locus_tag=DKM08_21075 NZ_QFYX01000005.1 Protein Homology CDS 191401 192147 . - 0 ID=cds-WP_003401319.1;Parent=gene-DKM08_RS21095;Dbxref=GenBank:WP_003401319.1;Name=WP_003401319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214761.1;locus_tag=DKM08_RS21095;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_003401319.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 192148 194088 . - . ID=gene-DKM08_RS21100;Name=DKM08_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21100;old_locus_tag=DKM08_21080 NZ_QFYX01000005.1 Protein Homology CDS 192148 194088 . - 0 ID=cds-WP_003401322.1;Parent=gene-DKM08_RS21100;Dbxref=GenBank:WP_003401322.1;Name=WP_003401322.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214762.1;locus_tag=DKM08_RS21100;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_003401322.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 194119 194940 . - . ID=gene-DKM08_RS21105;Name=DKM08_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21105;old_locus_tag=DKM08_21085 NZ_QFYX01000005.1 Protein Homology CDS 194119 194940 . - 0 ID=cds-WP_003401324.1;Parent=gene-DKM08_RS21105;Dbxref=GenBank:WP_003401324.1;Name=WP_003401324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214763.1;locus_tag=DKM08_RS21105;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_003401324.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 195020 195313 . - . ID=gene-DKM08_RS21110;Name=DKM08_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21110;old_locus_tag=DKM08_21090 NZ_QFYX01000005.1 Protein Homology CDS 195020 195313 . - 0 ID=cds-WP_003401329.1;Parent=gene-DKM08_RS21110;Dbxref=GenBank:WP_003401329.1;Name=WP_003401329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214764.1;locus_tag=DKM08_RS21110;product=hypothetical protein;protein_id=WP_003401329.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 195458 195937 . - . ID=gene-DKM08_RS21115;Name=acr2;gbkey=Gene;gene=acr2;gene_biotype=protein_coding;gene_synonym=hsp;locus_tag=DKM08_RS21115;old_locus_tag=DKM08_21095 NZ_QFYX01000005.1 Protein Homology CDS 195458 195937 . - 0 ID=cds-WP_003900838.1;Parent=gene-DKM08_RS21115;Dbxref=GenBank:WP_003900838.1;Name=WP_003900838.1;gbkey=CDS;gene=acr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214765.1;locus_tag=DKM08_RS21115;product=stress-responsive chaperone Acr2;protein_id=WP_003900838.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 196151 198712 . + . ID=gene-DKM08_RS21120;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=DKM08_RS21120;old_locus_tag=DKM08_21100 NZ_QFYX01000005.1 Protein Homology CDS 196151 198712 . + 0 ID=cds-WP_003401336.1;Parent=gene-DKM08_RS21120;Dbxref=GenBank:WP_003401336.1;Name=WP_003401336.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214766.1;locus_tag=DKM08_RS21120;product=nitrite reductase large subunit NirB;protein_id=WP_003401336.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 198738 199094 . + . ID=gene-DKM08_RS21125;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=DKM08_RS21125;old_locus_tag=DKM08_21105 NZ_QFYX01000005.1 Protein Homology CDS 198738 199094 . + 0 ID=cds-WP_003401341.1;Parent=gene-DKM08_RS21125;Dbxref=GenBank:WP_003401341.1;Name=WP_003401341.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214767.1;locus_tag=DKM08_RS21125;product=nitrite reductase small subunit NirD;protein_id=WP_003401341.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 199110 199634 . - . ID=gene-DKM08_RS21130;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=DKM08_RS21130;old_locus_tag=DKM08_21110 NZ_QFYX01000005.1 Protein Homology CDS 199110 199634 . - 0 ID=cds-WP_003899876.1;Parent=gene-DKM08_RS21130;Dbxref=GenBank:WP_003899876.1;Name=WP_003899876.1;Ontology_term=GO:0009236,GO:0000166,GO:0008820,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,cobinamide phosphate guanylyltransferase activity|0008820||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214768.1;locus_tag=DKM08_RS21130;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_003899876.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 199659 201143 . - . ID=gene-DKM08_RS21135;Name=DKM08_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21135;old_locus_tag=DKM08_21115 NZ_QFYX01000005.1 Protein Homology CDS 199659 201143 . - 0 ID=cds-WP_003899877.1;Parent=gene-DKM08_RS21135;Dbxref=GenBank:WP_003899877.1;Name=WP_003899877.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177703.1;locus_tag=DKM08_RS21135;product=cobyric acid synthase;protein_id=WP_003899877.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 201162 202832 . - . ID=gene-DKM08_RS21140;Name=DKM08_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21140;old_locus_tag=DKM08_21120 NZ_QFYX01000005.1 Protein Homology CDS 201162 202832 . - 0 ID=cds-WP_003401347.1;Parent=gene-DKM08_RS21140;Dbxref=GenBank:WP_003401347.1;Name=WP_003401347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177704.1;locus_tag=DKM08_RS21140;product=PPE family protein;protein_id=WP_003401347.1;transl_table=11 NZ_QFYX01000005.1 cmsearch riboswitch 202971 203152 . - . ID=id-NZ_QFYX01000005.1:202971..203152;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_QFYX01000005.1 RefSeq gene 203579 204034 . - . ID=gene-DKM08_RS21145;Name=DKM08_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21145;old_locus_tag=DKM08_21135 NZ_QFYX01000005.1 Protein Homology CDS 203579 204034 . - 0 ID=cds-WP_003401352.1;Parent=gene-DKM08_RS21145;Dbxref=GenBank:WP_003401352.1;Name=WP_003401352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214772.1;locus_tag=DKM08_RS21145;product=hypothetical protein;protein_id=WP_003401352.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 204059 204802 . - . ID=gene-DKM08_RS21150;Name=DKM08_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21150;old_locus_tag=DKM08_21140 NZ_QFYX01000005.1 Protein Homology CDS 204059 204802 . - 0 ID=cds-WP_003401354.1;Parent=gene-DKM08_RS21150;Dbxref=GenBank:WP_003401354.1;Name=WP_003401354.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214773.1;locus_tag=DKM08_RS21150;product=sirohydrochlorin chelatase;protein_id=WP_003401354.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 204799 205944 . - . ID=gene-DKM08_RS21155;Name=DKM08_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21155;old_locus_tag=DKM08_21145 NZ_QFYX01000005.1 Protein Homology CDS 204799 205944 . - 0 ID=cds-WP_003401357.1;Parent=gene-DKM08_RS21155;Dbxref=GenBank:WP_003401357.1;Name=WP_003401357.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214774.1;locus_tag=DKM08_RS21155;product=uroporphyrinogen-III synthase;protein_id=WP_003401357.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 206044 207453 . - . ID=gene-DKM08_RS21160;Name=DKM08_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21160;old_locus_tag=DKM08_21150 NZ_QFYX01000005.1 Protein Homology CDS 206044 207453 . - 0 ID=cds-WP_003401360.1;Parent=gene-DKM08_RS21160;Dbxref=GenBank:WP_003401360.1;Name=WP_003401360.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214775.1;locus_tag=DKM08_RS21160;product=MFS transporter;protein_id=WP_003401360.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 207594 208139 . - . ID=gene-DKM08_RS21165;Name=aac(2')-Ic;gbkey=Gene;gene=aac(2')-Ic;gene_biotype=protein_coding;locus_tag=DKM08_RS21165;old_locus_tag=DKM08_21155 NZ_QFYX01000005.1 Protein Homology CDS 207594 208139 . - 0 ID=cds-WP_003899880.1;Parent=gene-DKM08_RS21165;Dbxref=GenBank:WP_003899880.1;Name=WP_003899880.1;gbkey=CDS;gene=aac(2')-Ic;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899880.1;locus_tag=DKM08_RS21165;product=aminoglycoside N-acetyltransferase AAC(2')-Ic;protein_id=WP_003899880.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 208149 209051 . - . ID=gene-DKM08_RS21170;Name=DKM08_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21170;old_locus_tag=DKM08_21160 NZ_QFYX01000005.1 Protein Homology CDS 208149 209051 . - 0 ID=cds-WP_003401367.1;Parent=gene-DKM08_RS21170;Dbxref=GenBank:WP_003401367.1;Name=WP_003401367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214777.1;locus_tag=DKM08_RS21170;product=5-oxoprolinase/urea amidolyase family protein;protein_id=WP_003401367.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 209068 209700 . - . ID=gene-DKM08_RS21175;Name=DKM08_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21175;old_locus_tag=DKM08_21165 NZ_QFYX01000005.1 Protein Homology CDS 209068 209700 . - 0 ID=cds-WP_003401370.1;Parent=gene-DKM08_RS21175;Dbxref=GenBank:WP_003401370.1;Name=WP_003401370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214778.1;locus_tag=DKM08_RS21175;product=5-oxoprolinase subunit B family protein;protein_id=WP_003401370.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 209796 210788 . - . ID=gene-DKM08_RS21180;Name=DKM08_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21180;old_locus_tag=DKM08_21170 NZ_QFYX01000005.1 Protein Homology CDS 209796 210788 . - 0 ID=cds-WP_003401373.1;Parent=gene-DKM08_RS21180;Dbxref=GenBank:WP_003401373.1;Name=WP_003401373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177705.1;locus_tag=DKM08_RS21180;product=ABC transporter substrate-binding protein;protein_id=WP_003401373.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 210810 214439 . - . ID=gene-DKM08_RS21185;Name=oplA;gbkey=Gene;gene=oplA;gene_biotype=protein_coding;locus_tag=DKM08_RS21185;old_locus_tag=DKM08_21175 NZ_QFYX01000005.1 Protein Homology CDS 210810 214439 . - 0 ID=cds-WP_003899883.1;Parent=gene-DKM08_RS21185;Dbxref=GenBank:WP_003899883.1;Name=WP_003899883.1;Ontology_term=GO:0003824;gbkey=CDS;gene=oplA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214780.1;locus_tag=DKM08_RS21185;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_003899883.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 214616 216007 . + . ID=gene-DKM08_RS21190;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=DKM08_RS21190;old_locus_tag=DKM08_21180 NZ_QFYX01000005.1 Protein Homology CDS 214616 216007 . + 0 ID=cds-WP_003401380.1;Parent=gene-DKM08_RS21190;Dbxref=GenBank:WP_003401380.1;Name=WP_003401380.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;gene=narU;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214781.1;locus_tag=DKM08_RS21190;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_003401380.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 216049 216306 . - . ID=gene-DKM08_RS21795;Name=DKM08_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21795 NZ_QFYX01000005.1 Protein Homology CDS 216049 216306 . - 0 ID=cds-WP_003911137.1;Parent=gene-DKM08_RS21795;Dbxref=GenBank:WP_003911137.1;Name=WP_003911137.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=DKM08_RS21795;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003911137.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 216303 216428 . - . ID=gene-DKM08_RS22360;Name=DKM08_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS22360 NZ_QFYX01000005.1 Protein Homology CDS 216303 216428 . - 0 ID=cds-WP_003918044.1;Parent=gene-DKM08_RS22360;Dbxref=GenBank:WP_003918044.1;Name=WP_003918044.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: protein motif:HMM:NF016876.6;locus_tag=DKM08_RS22360;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003918044.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 216623 217816 . - . ID=gene-DKM08_RS21200;Name=DKM08_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21200;old_locus_tag=DKM08_21190 NZ_QFYX01000005.1 Protein Homology CDS 216623 217816 . - 0 ID=cds-WP_003401386.1;Parent=gene-DKM08_RS21200;Dbxref=GenBank:WP_003401386.1;Name=WP_003401386.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214783.1;locus_tag=DKM08_RS21200;product=DNA polymerase domain-containing protein;protein_id=WP_003401386.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 217852 219534 . + . ID=gene-DKM08_RS21205;Name=fadD2;gbkey=Gene;gene=fadD2;gene_biotype=pseudogene;locus_tag=DKM08_RS21205;old_locus_tag=DKM08_21195;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 217852 219534 . + 0 ID=cds-DKM08_RS21205;Parent=gene-DKM08_RS21205;Note=internal stop;gbkey=CDS;gene=fadD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214784.1;locus_tag=DKM08_RS21205;product=long-chain-fatty-acid--CoA ligase FadD2;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 219551 221746 . - . ID=gene-DKM08_RS21210;Name=DKM08_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21210;old_locus_tag=DKM08_21200 NZ_QFYX01000005.1 Protein Homology CDS 219551 221746 . - 0 ID=cds-WP_003401392.1;Parent=gene-DKM08_RS21210;Dbxref=GenBank:WP_003401392.1;Name=WP_003401392.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214785.1;locus_tag=DKM08_RS21210;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401392.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 221860 222993 . - . ID=gene-DKM08_RS21215;Name=DKM08_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21215;old_locus_tag=DKM08_21205 NZ_QFYX01000005.1 Protein Homology CDS 221860 222993 . - 0 ID=cds-WP_010950370.1;Parent=gene-DKM08_RS21215;Dbxref=GenBank:WP_010950370.1;Name=WP_010950370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214786.1;locus_tag=DKM08_RS21215;product=alpha/beta hydrolase;protein_id=WP_010950370.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 222990 223610 . - . ID=gene-DKM08_RS21220;Name=DKM08_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21220;old_locus_tag=DKM08_21210 NZ_QFYX01000005.1 Protein Homology CDS 222990 223610 . - 0 ID=cds-WP_003401397.1;Parent=gene-DKM08_RS21220;Dbxref=GenBank:WP_003401397.1;Name=WP_003401397.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214787.1;locus_tag=DKM08_RS21220;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401397.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 223707 224288 . + . ID=gene-DKM08_RS21225;Name=DKM08_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21225;old_locus_tag=DKM08_21215 NZ_QFYX01000005.1 Protein Homology CDS 223707 224288 . + 0 ID=cds-WP_003401399.1;Parent=gene-DKM08_RS21225;Dbxref=GenBank:WP_003401399.1;Name=WP_003401399.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214788.1;locus_tag=DKM08_RS21225;product=VOC family protein;protein_id=WP_003401399.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 224218 224943 . - . ID=gene-DKM08_RS21230;Name=DKM08_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21230;old_locus_tag=DKM08_21220 NZ_QFYX01000005.1 Protein Homology CDS 224218 224943 . - 0 ID=cds-WP_003902925.1;Parent=gene-DKM08_RS21230;Dbxref=GenBank:WP_003902925.1;Name=WP_003902925.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177706.1;locus_tag=DKM08_RS21230;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003902925.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 225033 225953 . + . ID=gene-DKM08_RS21235;Name=DKM08_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21235;old_locus_tag=DKM08_21225 NZ_QFYX01000005.1 Protein Homology CDS 225033 225953 . + 0 ID=cds-WP_003401404.1;Parent=gene-DKM08_RS21235;Dbxref=GenBank:WP_003401404.1;Name=WP_003401404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214790.1;locus_tag=DKM08_RS21235;product=oxygenase MpaB family protein;protein_id=WP_003401404.1;transl_table=11 NZ_QFYX01000005.1 RefSeq gene 225993 226421 . - . ID=gene-DKM08_RS21240;Name=DKM08_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21240;old_locus_tag=DKM08_21230 NZ_QFYX01000005.1 Protein Homology CDS 225993 226421 . - 0 ID=cds-WP_003401406.1;Parent=gene-DKM08_RS21240;Dbxref=GenBank:WP_003401406.1;Name=WP_003401406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214791.1;locus_tag=DKM08_RS21240;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003401406.1;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 226445 226702 . - . ID=gene-DKM08_RS21245;Name=vapB25;gbkey=Gene;gene=vapB25;gene_biotype=pseudogene;locus_tag=DKM08_RS21245;old_locus_tag=DKM08_21235;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 226445 226702 . - 0 ID=cds-DKM08_RS21245;Parent=gene-DKM08_RS21245;Note=internal stop;gbkey=CDS;gene=vapB25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=DKM08_RS21245;product=type II toxin-antitoxin system antitoxin vapB25;pseudo=true;transl_table=11 NZ_QFYX01000005.1 RefSeq pseudogene 226722 229095 . - . ID=gene-DKM08_RS21250;Name=DKM08_RS21250;end_range=229095,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS21250;old_locus_tag=DKM08_21240;partial=true;pseudo=true NZ_QFYX01000005.1 Protein Homology CDS 226722 229095 . - 2 ID=cds-DKM08_RS21250;Parent=gene-DKM08_RS21250;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=229095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=DKM08_RS21250;partial=true;product=PE family protein;pseudo=true;transl_table=11 ##sequence-region NZ_QFYX01000006.1 1 742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000006.1 RefSeq region 1 742 . + . ID=NZ_QFYX01000006.1:1..742;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000006.1 RefSeq pseudogene 1 742 . - . ID=gene-DKM08_RS22835;Name=DKM08_RS22835;end_range=742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DKM08_RS22835;old_locus_tag=DKM08_21245;partial=true;pseudo=true;start_range=.,1 NZ_QFYX01000006.1 Protein Homology CDS 1 742 . - 0 ID=cds-DKM08_RS22835;Parent=gene-DKM08_RS22835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=DKM08_RS22835;partial=true;product=PE family protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_QFYX01000007.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000007.1 RefSeq region 1 651 . + . ID=NZ_QFYX01000007.1:1..651;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000007.1 RefSeq gene 45 651 . - . ID=gene-DKM08_RS21260;Name=DKM08_RS21260;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21260;old_locus_tag=DKM08_21250;partial=true NZ_QFYX01000007.1 GeneMarkS-2+ CDS 45 651 . - 1 ID=cds-WP_147020944.1;Parent=gene-DKM08_RS21260;Dbxref=GenBank:WP_147020944.1;Name=WP_147020944.1;end_range=651,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DKM08_RS21260;partial=true;product=hypothetical protein;protein_id=WP_147020944.1;transl_table=11 ##sequence-region NZ_QFYX01000008.1 1 535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000008.1 RefSeq region 1 535 . + . ID=NZ_QFYX01000008.1:1..535;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000008.1 RefSeq gene 120 535 . + . ID=gene-DKM08_RS21265;Name=DKM08_RS21265;end_range=535,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21265;old_locus_tag=DKM08_21255;partial=true NZ_QFYX01000008.1 Protein Homology CDS 120 535 . + 0 ID=cds-WP_215727383.1;Parent=gene-DKM08_RS21265;Dbxref=GenBank:WP_215727383.1;Name=WP_215727383.1;Ontology_term=GO:0006282;end_range=535,.;gbkey=CDS;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: protein motif:HMM:NF001064.0;locus_tag=DKM08_RS21265;partial=true;product=regulatory protein RecX;protein_id=WP_215727383.1;transl_table=11 ##sequence-region NZ_QFYX01000009.1 1 535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1765 NZ_QFYX01000009.1 RefSeq region 1 535 . + . ID=NZ_QFYX01000009.1:1..535;Dbxref=taxon:1765;collected-by=Hazem Abdelaal;collection-date=2014-07;country=Egypt;gb-synonym=Mycobacterium bovis;gbkey=Src;genome=genomic;isolation-source=Mesentery LN;lat-lon=30.8754 N 31.0335 E;mol_type=genomic DNA;nat-host=cattle;strain=MBE7 NZ_QFYX01000009.1 RefSeq gene 39 179 . + . ID=gene-DKM08_RS22840;Name=pspAA;gbkey=Gene;gene=pspAA;gene_biotype=protein_coding;locus_tag=DKM08_RS22840 NZ_QFYX01000009.1 Protein Homology CDS 39 179 . + 0 ID=cds-WP_423797348.1;Parent=gene-DKM08_RS22840;Dbxref=GenBank:WP_423797348.1;Name=WP_423797348.1;gbkey=CDS;gene=pspAA;inference=COORDINATES: protein motif:HMM:NF046813.2;locus_tag=DKM08_RS22840;product=PspA-associated protein PspAA;protein_id=WP_423797348.1;transl_table=11 NZ_QFYX01000009.1 RefSeq gene 166 312 . - . ID=gene-DKM08_RS21805;Name=DKM08_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21805 NZ_QFYX01000009.1 Protein Homology CDS 166 312 . - 0 ID=cds-WP_002522424.1;Parent=gene-DKM08_RS21805;Dbxref=GenBank:WP_002522424.1;Name=WP_002522424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002522424.1;locus_tag=DKM08_RS21805;product=hypothetical protein;protein_id=WP_002522424.1;transl_table=11 NZ_QFYX01000009.1 RefSeq gene 350 535 . + . ID=gene-DKM08_RS21270;Name=DKM08_RS21270;end_range=535,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DKM08_RS21270;old_locus_tag=DKM08_21260;partial=true NZ_QFYX01000009.1 Protein Homology CDS 350 535 . + 0 ID=cds-WP_147020948.1;Parent=gene-DKM08_RS21270;Dbxref=GenBank:WP_147020948.1;Name=WP_147020948.1;Ontology_term=GO:0016226,GO:0051536;end_range=535,.;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005144565.1;locus_tag=DKM08_RS21270;partial=true;product=HesB/IscA family protein;protein_id=WP_147020948.1;transl_table=11 ###